2707299:HRR28 RS04680
gene id: 2707299:HRR28_RS04680
uniprot id: A0A6F8SJP2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL1 family.
messages: Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
messages: Part of the 50S ribosomal subunit.
messages: Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.

2707299:HRR28 RS10245
gene id: 2707299:HRR28_RS10245
uniprot id: A0A6F8SNI7
names: Similarity
messages: Belongs to the carbamate kinase family.

2707299:HRR28 RS04510
gene id: 2707299:HRR28_RS04510
uniprot id: A0A6F8SJL5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL15 family.
messages: Binds to the 23S rRNA.
messages: Part of the 50S ribosomal subunit.

2707299:HRR28 RS02335
gene id: 2707299:HRR28_RS02335
uniprot id: A0A6F8SJ91
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acetylglutamate kinase family. ArgB subfamily.
messages: Catalyzes the ATP-dependent phosphorylation of N-acetyl-L-glutamate.
messages: Cytoplasm

2707299:HRR28 RS03960
gene id: 2707299:HRR28_RS03960
uniprot id: A0A6F8SK39
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS11 family.
messages: Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
messages: Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.

2707299:HRR28 RS07360
gene id: 2707299:HRR28_RS07360
uniprot id: A0A6F8SKM3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsA/MreB family.
messages: Cytoplasm
messages: Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature.
messages: Forms polymers.

2707299:HRR28 RS07470
gene id: 2707299:HRR28_RS07470
uniprot id: A0A6F8SKP4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-3 family.
messages: Cytoplasm
messages: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
messages: Monomer.

2707299:HRR28 RS03850
gene id: 2707299:HRR28_RS03850
uniprot id: A0A6F8SJ96
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GroES chaperonin family.
messages: Cytoplasm
messages: Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.
messages: Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.

2707299:HRR28 RS03955
gene id: 2707299:HRR28_RS03955
uniprot id: A0A6F8SJ32
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS13 family.
messages: Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.
messages: Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome.

2707299:HRR28 RS02320
gene id: 2707299:HRR28_RS02320
uniprot id: A0A6F8SIZ3
names: Similarity
messages: Belongs to the FKBP-type PPIase family.

2707299:HRR28 RS00725
gene id: 2707299:HRR28_RS00725
uniprot id: A0A6F8SH84
names: Caution
names: Function
names: Subunit
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.

2707299:HRR28 RS00075
gene id: 2707299:HRR28_RS00075
uniprot id: A0A6F8SIB5
names: Function
names: Similarity
messages: Antitoxin component of a type II toxin-antitoxin (TA) system.
messages: Belongs to the phD/YefM antitoxin family.

2707299:HRR28 RS01330
gene id: 2707299:HRR28_RS01330
uniprot id: A0A6F8SID6
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the transcriptional regulatory CopG/NikR family.
messages: Binds 1 nickel ion per subunit.
messages: Transcriptional regulator.

2707299:HRR28 RS05480
gene id: 2707299:HRR28_RS05480
uniprot id: A0A6F8SL76
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL21 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L20.
messages: This protein binds to 23S rRNA in the presence of protein L20.

2707299:HRR28 RS04145
gene id: 2707299:HRR28_RS04145
uniprot id: A0A6F8SJ56
names: Function
names: Similarity
messages: Belongs to the relA/spoT family.
messages: In eubacteria ppGpp (guanosine 3'-diphosphate 5'-diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.

2707299:HRR28 RS01420
gene id: 2707299:HRR28_RS01420
uniprot id: A0A6F8SJ58
names: Similarity
messages: Belongs to the HupF/HypC family.

2707299:HRR28 RS07015
gene id: 2707299:HRR28_RS07015
uniprot id: A0A6F8SKQ6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NusA family.
messages: Cytoplasm
messages: Monomer. Binds directly to the core enzyme of the DNA-dependent RNA polymerase and to nascent RNA.
messages: Participates in both transcription termination and antitermination.

2707299:HRR28 RS05040
gene id: 2707299:HRR28_RS05040
uniprot id: A0A6F8SKH8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TACO1 family.
messages: Cytoplasm

2707299:HRR28 RS03855
gene id: 2707299:HRR28_RS03855
uniprot id: A0A6F8SKZ8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the chaperonin (HSP60) family.
messages: Cell surface
messages: Cytoplasm
messages: Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.
messages: capsule
messages: cell wall

2707299:HRR28 RS07610
gene id: 2707299:HRR28_RS07610
uniprot id: A0A6F8SM72
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL32 family.

2707299:HRR28 RS10390
gene id: 2707299:HRR28_RS10390
uniprot id: A0A6F8SNM3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL12 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.
messages: Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.

2707299:HRR28 RS08185
gene id: 2707299:HRR28_RS08185
uniprot id: A0A6F8SLQ1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase C chain family.
messages: Cell membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.
messages: Membrane

2707299:HRR28 RS03965
gene id: 2707299:HRR28_RS03965
uniprot id: A0A6F8SJB6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS4 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S5 and S12 plays an important role in translational accuracy.

2707299:HRR28 RS04475
gene id: 2707299:HRR28_RS04475
uniprot id: A0A6F8SJ15
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL5 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.
messages: This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.

2707299:HRR28 RS10815
gene id: 2707299:HRR28_RS10815
uniprot id: A0A6F8SP21
names: Function
names: Similarity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
messages: Necessary for normal cell division and for the maintenance of normal septation.

2707299:HRR28 RS05620
gene id: 2707299:HRR28_RS05620
uniprot id: A0A6F8SLW1
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP-binding SRP family. SRP54 subfamily.
messages: Composed of three domains: the N-terminal N domain, which is responsible for interactions with the ribosome, the central G domain, which binds GTP, and the C-terminal M domain, which binds the RNA and the signal sequence of the RNC.
messages: Cytoplasm
messages: Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY.
messages: Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY.

2707299:HRR28 RS07400
gene id: 2707299:HRR28_RS07400
uniprot id: A0A6F8SMT4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NDK family.
messages: Cytoplasm
messages: Homotetramer.
messages: Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.

2707299:HRR28 RS00720
gene id: 2707299:HRR28_RS00720
uniprot id: A0A6F8SI16
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS6 family.
messages: Binds together with S18 to 16S ribosomal RNA.

2707299:HRR28 RS04440
gene id: 2707299:HRR28_RS04440
uniprot id: A0A6F8SK56
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL22 family.
messages: Part of the 50S ribosomal subunit.
messages: The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
messages: This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
messages: This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.

2707299:HRR28 RS04840
gene id: 2707299:HRR28_RS04840
uniprot id: A0A6F8SKW7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DivIVA family.
messages: Cytoplasm

2707299:HRR28 RS10175
gene id: 2707299:HRR28_RS10175
uniprot id: A0A6F8SP82
names: Similarity
messages: Belongs to the AOR/FOR family.

2707299:HRR28 RS01340
gene id: 2707299:HRR28_RS01340
uniprot id: A0A6F8SHN4
names: Function
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

2707299:HRR28 RS05070
gene id: 2707299:HRR28_RS05070
uniprot id: A0A6F8SL03
names: Subcellular Location Annotation
messages: Cytoplasm

2707299:HRR28 RS02480
gene id: 2707299:HRR28_RS02480
uniprot id: A0A6F8SKA3
names: Function
names: Similarity
messages: Belongs to the RecR family.
messages: May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.

2707299:HRR28 RS08870
gene id: 2707299:HRR28_RS08870
uniprot id: A0A6F8SLN2
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
messages: Cytoplasm
messages: Homodimer.

2707299:HRR28 RS06825
gene id: 2707299:HRR28_RS06825
uniprot id: A0A6F8SKM7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the XseB family.
messages: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
messages: Cytoplasm
messages: Heterooligomer composed of large and small subunits.

2707299:HRR28 RS04430
gene id: 2707299:HRR28_RS04430
uniprot id: A0A6F8SJ50
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL2 family.
messages: One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome.

2707299:HRR28 RS04670
gene id: 2707299:HRR28_RS04670
uniprot id: A0A6F8SJG0
names: Function
names: Similarity
messages: Belongs to the NusG family.
messages: Participates in transcription elongation, termination and antitermination.

2707299:HRR28 RS04160
gene id: 2707299:HRR28_RS04160
uniprot id: A0A6F8SJF4
names: Similarity
messages: Belongs to the PhoU family.
messages: Belongs to the UPF0111 family.

2707299:HRR28 RS03970
gene id: 2707299:HRR28_RS03970
uniprot id: A0A6F8SL15
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase alpha chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.

2707299:HRR28 RS04815
gene id: 2707299:HRR28_RS04815
uniprot id: A0A6F8SJH9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsZ family.
messages: Cytoplasm
messages: Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
messages: Homodimer. Polymerizes to form a dynamic ring structure in a strictly GTP-dependent manner. Interacts directly with several other division proteins.

2707299:HRR28 RS04490
gene id: 2707299:HRR28_RS04490
uniprot id: A0A6F8SK67
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL6 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.

2707299:HRR28 RS01065
gene id: 2707299:HRR28_RS01065
uniprot id: A0A6F8SH94
names: Similarity
messages: Belongs to the DtxR/MntR family.

2707299:HRR28 RS07100
gene id: 2707299:HRR28_RS07100
uniprot id: A0A6F8SKR9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial CoaD family.
messages: Cytoplasm
messages: Homohexamer.
messages: Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.

2707299:HRR28 RS04675
gene id: 2707299:HRR28_RS04675
uniprot id: A0A6F8SKG4
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL11 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
messages: One or more lysine residues are methylated.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

2707299:HRR28 RS04835
gene id: 2707299:HRR28_RS04835
uniprot id: A0A6F8SLG5
names: Similarity
messages: Belongs to the YggT family.

2707299:HRR28 RS04460
gene id: 2707299:HRR28_RS04460
uniprot id: A0A6F8SJK6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS17 family.
messages: One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
messages: Part of the 30S ribosomal subunit.

2707299:HRR28 RS01985
gene id: 2707299:HRR28_RS01985
uniprot id: A0A6F8SI57
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Mrp/NBP35 ATP-binding proteins family.
messages: Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP.
messages: Homodimer.

2707299:HRR28 RS05425
gene id: 2707299:HRR28_RS05425
uniprot id: A0A6F8SLS2
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds the 23S rRNA.
messages: Part of the 50S ribosomal subunit.

2707299:HRR28 RS06525
gene id: 2707299:HRR28_RS06525
uniprot id: A0A6F8SK33
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase S24 family.
messages: Homodimer.
messages: Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.

2707299:HRR28 RS07465
gene id: 2707299:HRR28_RS07465
uniprot id: A0A6F8SMA9
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL35 family.

2707299:HRR28 RS04465
gene id: 2707299:HRR28_RS04465
uniprot id: A0A6F8SL99
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.

2707299:HRR28 RS04290
gene id: 2707299:HRR28_RS04290
uniprot id: A0A6F8SK28
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS10 family.
messages: Involved in the binding of tRNA to the ribosomes.
messages: Part of the 30S ribosomal subunit.

2707299:HRR28 RS04095
gene id: 2707299:HRR28_RS04095
uniprot id: A0A6F8SJZ1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Cytoplasm
messages: Homohexamer.
messages: Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P).

2707299:HRR28 RS00730
gene id: 2707299:HRR28_RS00730
uniprot id: A0A6F8SHD3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS18 family.
messages: Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6.

2707299:HRR28 RS06480
gene id: 2707299:HRR28_RS06480
uniprot id: A0A6F8SKF9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecA family.
messages: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.
messages: Cytoplasm

2707299:HRR28 RS05775
gene id: 2707299:HRR28_RS05775
uniprot id: A0A6F8SLC8
names: Similarity
messages: Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.

2707299:HRR28 RS04450
gene id: 2707299:HRR28_RS04450
uniprot id: A0A6F8SJC3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
messages: Part of the 50S ribosomal subunit.

2707299:HRR28 RS00885
gene id: 2707299:HRR28_RS00885
uniprot id: A0A6F8SHB2
names: Similarity
messages: Belongs to the peptidase C40 family.

2707299:HRR28 RS02230
gene id: 2707299:HRR28_RS02230
uniprot id: A0A6F8SI24
names: Function
names: Similarity
messages: Belongs to the GreA/GreB family.
messages: Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.

2707299:HRR28 RS04495
gene id: 2707299:HRR28_RS04495
uniprot id: A0A6F8SJC0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL18 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.
messages: This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.

2707299:HRR28 RS04445
gene id: 2707299:HRR28_RS04445
uniprot id: A0A6F8SJB1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS3 family.
messages: Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.
messages: Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.

2707299:HRR28 RS01860
gene id: 2707299:HRR28_RS01860
uniprot id: A0A6F8SIN8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NrfD family.
messages: Membrane

2707299:HRR28 RS05430
gene id: 2707299:HRR28_RS05430
uniprot id: A0A6F8SL67
names: Similarity
messages: Belongs to the glutamine synthetase family.

2707299:HRR28 RS07000
gene id: 2707299:HRR28_RS07000
uniprot id: A0A6F8SKQ3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RbfA family.
messages: Cytoplasm
messages: Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal subunits or 70S ribosomes.
messages: One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.

2707299:HRR28 RS04305
gene id: 2707299:HRR28_RS04305
uniprot id: A0A6F8SKA4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.
messages: Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.

2707299:HRR28 RS04655
gene id: 2707299:HRR28_RS04655
uniprot id: A0A6F8SKA0
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL33 family.

2707299:HRR28 RS06430
gene id: 2707299:HRR28_RS06430
uniprot id: A0A6F8SKF0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS15 family.
messages: Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
messages: Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.

2707299:HRR28 RS04175
gene id: 2707299:HRR28_RS04175
uniprot id: A0A6F8SIV8
names: Function
names: Similarity
messages: Belongs to the aspartokinase family.
messages: Catalyzes the phosphorylation of the beta-carboxyl group of aspartic acid with ATP to yield 4-phospho-L-aspartate, which is involved in the branched biosynthetic pathway leading to the biosynthesis of amino acids lysine, threonine, isoleucine and methionine.

2707299:HRR28 RS11240
gene id: 2707299:HRR28_RS11240
uniprot id: A0A6F8SP79
names: Similarity
messages: Belongs to the universal ribosomal protein uS9 family.

2707299:HRR28 RS04435
gene id: 2707299:HRR28_RS04435
uniprot id: A0A6F8SKV7
names: Function
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.

2707299:HRR28 RS11245
gene id: 2707299:HRR28_RS11245
uniprot id: A0A6F8SNF5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL13 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.

2707299:HRR28 RS00910
gene id: 2707299:HRR28_RS00910
uniprot id: A0A6F8SH13
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.

2707299:HRR28 RS02250
gene id: 2707299:HRR28_RS02250
uniprot id: A0A6F8SK71
names: Function
names: Similarity
messages: Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
messages: Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).

2707299:HRR28 RS03945
gene id: 2707299:HRR28_RS03945
uniprot id: A0A6F8SJ18
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

2707299:HRR28 RS00950
gene id: 2707299:HRR28_RS00950
uniprot id: A0A6F8SJI5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the VirD4/TraG family.
messages: Membrane

2707299:HRR28 RS00635
gene id: 2707299:HRR28_RS00635
uniprot id: A0A6F8SHB9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the OXA1/ALB3/YidC family. Type 1 subfamily.
messages: Interacts with the Sec translocase complex via SecD. Specifically interacts with transmembrane segments of nascent integral membrane proteins during membrane integration.
messages: Membrane
messages: Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.

2707299:HRR28 RS06320
gene id: 2707299:HRR28_RS06320
uniprot id: A0A6F8SLM4
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase subunit omega family.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

2707299:HRR28 RS04485
gene id: 2707299:HRR28_RS04485
uniprot id: A0A6F8SKW6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS8 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.

2707299:HRR28 RS07055
gene id: 2707299:HRR28_RS07055
uniprot id: A0A6F8SME1
names: Similarity
messages: Belongs to the enoyl-CoA hydratase/isomerase family.

2707299:HRR28 RS01680
gene id: 2707299:HRR28_RS01680
uniprot id: A0A6F8SIX4
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the UPP synthase family.
messages: Binds 2 magnesium ions per subunit.
messages: Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
messages: Homodimer.

2707299:HRR28 RS04480
gene id: 2707299:HRR28_RS04480
uniprot id: A0A6F8SJ61
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
messages: Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.

2707299:HRR28 RS05485
gene id: 2707299:HRR28_RS05485
uniprot id: A0A6F8SJJ8
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL27 family.

2707299:HRR28 RS04455
gene id: 2707299:HRR28_RS04455
uniprot id: A0A6F8SKD0
names: Similarity
messages: Belongs to the universal ribosomal protein uL29 family.

2707299:HRR28 RS07645
gene id: 2707299:HRR28_RS07645
uniprot id: A0A6F8SLW2
names: Similarity
messages: Belongs to the asp23 family.

2707299:HRR28 RS01080
gene id: 2707299:HRR28_RS01080
uniprot id: A0A6F8SHE8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the adenosylhomocysteinase family.
messages: Binds 1 NAD(+) per subunit.
messages: Cytoplasm
messages: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.

2707299:HRR28 RS06225
gene id: 2707299:HRR28_RS06225
uniprot id: A0A6F8SJX9
names: Similarity
messages: Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.

2707299:HRR28 RS03860
gene id: 2707299:HRR28_RS03860
uniprot id: A0A6F8SKC2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family. Xpt subfamily.
messages: Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
messages: Cytoplasm
messages: Homodimer.

2707299:HRR28 RS04500
gene id: 2707299:HRR28_RS04500
uniprot id: A0A6F8SJD3
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS5 family.
messages: Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.
messages: Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.
messages: The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S4 and S12 plays an important role in translational accuracy.

2707299:HRR28 RS02520
gene id: 2707299:HRR28_RS02520
uniprot id: A0A6F8SJC4
names: Similarity
messages: Belongs to the creatininase superfamily.

2707299:HRR28 RS05565
gene id: 2707299:HRR28_RS05565
uniprot id: A0A6F8SK78
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
messages: Cell membrane
messages: Membrane
messages: Part of the ABC transporter FtsEX involved in cellular division.

2707299:HRR28 RS07275
gene id: 2707299:HRR28_RS07275
uniprot id: A0A6F8SM18
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL19 family.
messages: This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.

2707299:HRR28 RS04280
gene id: 2707299:HRR28_RS04280
uniprot id: A0A6F8SJ14
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS7 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
messages: Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.