1628086:DLD99 RS17975
gene id: 1628086:DLD99_RS17975
uniprot id: A0A345RSL4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HflD family.
messages: Cell membrane
messages: Cytoplasm

1628086:DLD99 RS29010
gene id: 1628086:DLD99_RS29010
uniprot id: A0A345RYJ1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0161 family.
messages: Cell membrane
messages: Could be involved in insertion of integral membrane proteins into the membrane.

1628086:DLD99 RS25765
gene id: 1628086:DLD99_RS25765
uniprot id: A0A345RWS1
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase alpha chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.

1628086:DLD99 RS27065
gene id: 1628086:DLD99_RS27065
uniprot id: A0A345RXG5
names: Similarity
messages: Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.

1628086:DLD99 RS03765
gene id: 1628086:DLD99_RS03765
uniprot id: A0A345RK06
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1628086:DLD99 RS26260
gene id: 1628086:DLD99_RS26260
uniprot id: A0A345RX08
names: Function
names: Similarity
messages: Belongs to the DHNA family.
messages: Catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin.

1628086:DLD99 RS25845
gene id: 1628086:DLD99_RS25845
uniprot id: A0A345RWT7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS17 family.
messages: One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
messages: Part of the 30S ribosomal subunit.

1628086:DLD99 RS19380
gene id: 1628086:DLD99_RS19380
uniprot id: A0A345RTD2
names: Function
names: Similarity
names: Subunit
messages: Heterotetramer of two alpha chains (FadB) and two beta chains (FadA).
messages: In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
messages: In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
messages: Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate.

1628086:DLD99 RS17455
gene id: 1628086:DLD99_RS17455
uniprot id: A0A345RSB7
names: Function
names: Similarity
messages: Acts on leucine, isoleucine and valine.
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.

1628086:DLD99 RS28190
gene id: 1628086:DLD99_RS28190
uniprot id: A0A345RY34
names: Function
names: Similarity
messages: Belongs to the relA/spoT family.
messages: In eubacteria ppGpp (guanosine 3'-diphosphate 5'-diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.

1628086:DLD99 RS23695
gene id: 1628086:DLD99_RS23695
uniprot id: A0A345RVN9
names: Function
names: Similarity
messages: Belongs to the LpxC family.
messages: Catalyzes the hydrolysis of UDP-3-O-myristoyl-N-acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis.

1628086:DLD99 RS28690
gene id: 1628086:DLD99_RS28690
uniprot id: A0A345RYC9
names: Similarity
messages: Belongs to the acyl coenzyme A hydrolase family.

1628086:DLD99 RS27165
gene id: 1628086:DLD99_RS27165
uniprot id: A0A345RXI5
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the sigma-70 factor family. RpoH subfamily.
messages: Cytoplasm
messages: Interacts with the RNA polymerase core enzyme.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.

1628086:DLD99 RS09350
gene id: 1628086:DLD99_RS09350
uniprot id: A0A345RN00
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ureidoglycolate lyase family.
messages: Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
messages: Homodimer.

1628086:DLD99 RS02305
gene id: 1628086:DLD99_RS02305
uniprot id: A0A345RJ78
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds the 23S rRNA.
messages: Part of the 50S ribosomal subunit.

1628086:DLD99 RS06360
gene id: 1628086:DLD99_RS06360
uniprot id: A0A345RLE0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the KdsA family.
messages: Cytoplasm

1628086:DLD99 RS20460
gene id: 1628086:DLD99_RS20460
uniprot id: A0A345RTY3
names: Function
names: Similarity
messages: Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
messages: O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway.

1628086:DLD99 RS25795
gene id: 1628086:DLD99_RS25795
uniprot id: A0A345RWS7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL15 family.
messages: Binds to the 23S rRNA.
messages: Part of the 50S ribosomal subunit.

1628086:DLD99 RS07920
gene id: 1628086:DLD99_RS07920
uniprot id: A0A345RM82
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1628086:DLD99 RS04590
gene id: 1628086:DLD99_RS04590
uniprot id: A0A345RKF4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsA/MreB family.
messages: Cytoplasm
messages: Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature.
messages: Forms polymers.

1628086:DLD99 RS05475
gene id: 1628086:DLD99_RS05475
uniprot id: A0A345RKX6
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL19 family.
messages: This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.

1628086:DLD99 RS24010
gene id: 1628086:DLD99_RS24010
uniprot id: A0A345RVU9
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
messages: Allosterically activated by GTP.
messages: Belongs to the UPRTase family.
messages: Binds 1 Mg(2+) ion per subunit. The magnesium is bound as Mg-PRPP.
messages: Catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate.

1628086:DLD99 RS25815
gene id: 1628086:DLD99_RS25815
uniprot id: A0A345RWT1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL6 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.

1628086:DLD99 RS25865
gene id: 1628086:DLD99_RS25865
uniprot id: A0A345RWU1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL22 family.
messages: Part of the 50S ribosomal subunit.
messages: The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
messages: This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
messages: This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.

1628086:DLD99 RS02885
gene id: 1628086:DLD99_RS02885
uniprot id: A0A345RJJ0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0126 family.
messages: Membrane

1628086:DLD99 RS02280
gene id: 1628086:DLD99_RS02280
uniprot id: A0A345RJ74
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.
messages: ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
messages: Belongs to the ClpX chaperone family. HslU subfamily.
messages: Cytoplasm

1628086:DLD99 RS05820
gene id: 1628086:DLD99_RS05820
uniprot id: A0A345RL42
names: Subcellular Location Annotation
messages: Cytoplasm

1628086:DLD99 RS21120
gene id: 1628086:DLD99_RS21120
uniprot id: A0A345RUA8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thioester dehydratase family. FabA subfamily.
messages: Cytoplasm
messages: Homodimer.
messages: Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.

1628086:DLD99 RS22820
gene id: 1628086:DLD99_RS22820
uniprot id: A0A345RV73
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the argininosuccinate synthase family. Type 1 subfamily.
messages: Cytoplasm
messages: Homotetramer.

1628086:DLD99 RS25200
gene id: 1628086:DLD99_RS25200
uniprot id: A0A345RWG4
names: Similarity
messages: Belongs to the PhoH family.

1628086:DLD99 RS25770
gene id: 1628086:DLD99_RS25770
uniprot id: A0A345RWS2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS4 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S5 and S12 plays an important role in translational accuracy.

1628086:DLD99 RS25775
gene id: 1628086:DLD99_RS25775
uniprot id: A0A345RWS3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS11 family.
messages: Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
messages: Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.

1628086:DLD99 RS21850
gene id: 1628086:DLD99_RS21850
uniprot id: A0A345RUN7
names: Similarity
messages: Belongs to the YciI family.

1628086:DLD99 RS04585
gene id: 1628086:DLD99_RS04585
uniprot id: A0A345RKF3
names: Function
names: Similarity
names: Subunit
messages: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).
messages: Belongs to the GatC family.
messages: Heterotrimer of A, B and C subunits.

1628086:DLD99 RS22275
gene id: 1628086:DLD99_RS22275
uniprot id: A0A345RUW8
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the RuvC family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.

1628086:DLD99 RS23820
gene id: 1628086:DLD99_RS23820
uniprot id: A0A345RVR2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome b family.
messages: Binds 2 heme groups non-covalently.
messages: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
messages: Membrane
messages: The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein.

1628086:DLD99 RS28935
gene id: 1628086:DLD99_RS28935
uniprot id: A0A345RYH6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase alpha/beta chains family. T3SS ATPase subfamily.
messages: Cell membrane
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.

1628086:DLD99 RS21640
gene id: 1628086:DLD99_RS21640
uniprot id: A0A345RUJ8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial solute-binding protein 3 family.
messages: Periplasm

1628086:DLD99 RS25735
gene id: 1628086:DLD99_RS25735
uniprot id: A0A345RWR5
names: Caution
names: Function
names: Subunit
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.

1628086:DLD99 RS14985
gene id: 1628086:DLD99_RS14985
uniprot id: A0A345RR04
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ArnE family.
messages: Cell inner membrane
messages: Heterodimer of ArnE and ArnF.
messages: Membrane
messages: Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane.

1628086:DLD99 RS23835
gene id: 1628086:DLD99_RS23835
uniprot id: A0A345RVR5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL13 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.

1628086:DLD99 RS04285
gene id: 1628086:DLD99_RS04285
uniprot id: A0A345RK97
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the polyribonucleotide nucleotidyltransferase family.
messages: Component of the RNA degradosome, which is a multiprotein complex involved in RNA processing and mRNA degradation.
messages: Cytoplasm
messages: Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.

1628086:DLD99 RS23740
gene id: 1628086:DLD99_RS23740
uniprot id: A0A345RVP8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 4 family. MraY subfamily.
messages: Catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan: transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, yielding undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I.
messages: Cell membrane
messages: Membrane

1628086:DLD99 RS24745
gene id: 1628086:DLD99_RS24745
uniprot id: A0A345RW79
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL27 family.

1628086:DLD99 RS07535
gene id: 1628086:DLD99_RS07535
uniprot id: A0A345RM07
names: Function
names: Similarity
messages: An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH and other flavinylated proteins as well.
messages: Belongs to the SdhE FAD assembly factor family.

1628086:DLD99 RS26635
gene id: 1628086:DLD99_RS26635
uniprot id: A0A345RX81
names: Similarity
messages: In the N-terminal section; belongs to the NADH:flavin oxidoreductase/NADH oxidase family.

1628086:DLD99 RS25555
gene id: 1628086:DLD99_RS25555
uniprot id: A0A345RWN2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DMRL synthase family.
messages: Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
messages: Forms an icosahedral capsid composed of 60 subunits, arranged as a dodecamer of pentamers.

1628086:DLD99 RS09785
gene id: 1628086:DLD99_RS09785
uniprot id: A0A345RN86
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ribosome modulation factor family.
messages: Cytoplasm
messages: During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes).

1628086:DLD99 RS05345
gene id: 1628086:DLD99_RS05345
uniprot id: A0A345RKV0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.
messages: Cell membrane
messages: Cytoplasm
messages: Monomer.

1628086:DLD99 RS08040
gene id: 1628086:DLD99_RS08040
uniprot id: A0A345RMA5
names: Similarity
messages: Belongs to the arginase family. Agmatinase subfamily.

1628086:DLD99 RS22235
gene id: 1628086:DLD99_RS22235
uniprot id: A0A345RUW0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Pal lipoprotein family.
messages: Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
messages: The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer.

1628086:DLD99 RS04235
gene id: 1628086:DLD99_RS04235
uniprot id: A0A345RK89
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the triosephosphate isomerase family.
messages: Cytoplasm
messages: Homodimer.
messages: Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P).

1628086:DLD99 RS04275
gene id: 1628086:DLD99_RS04275
uniprot id: A0A345RK95
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
messages: Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.

1628086:DLD99 RS28950
gene id: 1628086:DLD99_RS28950
uniprot id: A0A345RYH9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase delta chain family.
messages: Cell membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction.

1628086:DLD99 RS08490
gene id: 1628086:DLD99_RS08490
uniprot id: A0A345RMJ4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliM family.
messages: Cell inner membrane
messages: FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
messages: Membrane

1628086:DLD99 RS23790
gene id: 1628086:DLD99_RS23790
uniprot id: A0A345RVQ6
names: Similarity
messages: Belongs to the UPF0102 family.

1628086:DLD99 RS10355
gene id: 1628086:DLD99_RS10355
uniprot id: A0A345RNJ1
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
messages: In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS10350
gene id: 1628086:DLD99_RS10350
uniprot id: A0A345RNJ0
names: Subcellular Location Annotation
messages: Membrane

1628086:DLD99 RS22840
gene id: 1628086:DLD99_RS22840
uniprot id: A0A345RV77
names: Similarity
messages: Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.

1628086:DLD99 RS25805
gene id: 1628086:DLD99_RS25805
uniprot id: A0A345RWS9
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS5 family.
messages: Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.
messages: Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.
messages: The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S4 and S12 plays an important role in translational accuracy.

1628086:DLD99 RS18290
gene id: 1628086:DLD99_RS18290
uniprot id: A0A345RSS5
names: Similarity
messages: Belongs to the acyl-CoA dehydrogenase family.

1628086:DLD99 RS01535
gene id: 1628086:DLD99_RS01535
uniprot id: A0A345RIU1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the 4-oxalocrotonate tautomerase family.
messages: Catalyzes the ketonization of 2-hydroxymuconate stereoselectively to yield 2-oxo-3-hexenedioate.
messages: Homohexamer.

1628086:DLD99 RS27995
gene id: 1628086:DLD99_RS27995
uniprot id: A0A345RXZ5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UbiK family.
messages: Cytoplasm
messages: Required for efficient ubiquinone (coenzyme Q) biosynthesis. UbiK is probably an accessory factor of Ubi enzymes and facilitates ubiquinone biosynthesis by acting as an assembly factor, a targeting factor, or both.

1628086:DLD99 RS04145
gene id: 1628086:DLD99_RS04145
uniprot id: A0A345RK71
names: Similarity
messages: Belongs to the ribosome association toxin RatA family.

1628086:DLD99 RS07240
gene id: 1628086:DLD99_RS07240
uniprot id: A0A345RLV6
names: Similarity
messages: Belongs to the peptidase C56 family.

1628086:DLD99 RS25955
gene id: 1628086:DLD99_RS25955
uniprot id: A0A345RWV9
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the SecE/SEC61-gamma family.
messages: Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.
messages: Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS07550
gene id: 1628086:DLD99_RS07550
uniprot id: A0A345RM10
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

1628086:DLD99 RS18020
gene id: 1628086:DLD99_RS18020
uniprot id: A0A345RSM3
names: Cofactor
names: Similarity
messages: Belongs to the complex I 24 kDa subunit family.
messages: Binds 1 [2Fe-2S] cluster.

1628086:DLD99 RS22325
gene id: 1628086:DLD99_RS22325
uniprot id: A0A345RUX7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MscS (TC 1.A.23) family.
messages: Cell inner membrane
messages: Homoheptamer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell, opening in response to stretch forces in the membrane lipid bilayer, without the need for other proteins. Contributes to normal resistance to hypoosmotic shock. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions.
messages: Membrane

1628086:DLD99 RS18870
gene id: 1628086:DLD99_RS18870
uniprot id: A0A345RT33
names: Cofactor
names: Similarity
messages: Belongs to the PTPS family. QueD subfamily.
messages: Binds 1 zinc ion per subunit.

1628086:DLD99 RS22255
gene id: 1628086:DLD99_RS22255
uniprot id: A0A345RUW4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ExbB/TolQ family.
messages: Cell inner membrane
messages: Membrane
messages: Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
messages: The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer.

1628086:DLD99 RS28970
gene id: 1628086:DLD99_RS28970
uniprot id: A0A345RYI3
names: Subcellular Location Annotation
messages: Membrane

1628086:DLD99 RS20195
gene id: 1628086:DLD99_RS20195
uniprot id: A0A345RTT1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DoxX family.
messages: Membrane

1628086:DLD99 RS01835
gene id: 1628086:DLD99_RS01835
uniprot id: A0A345RIY9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Membrane

1628086:DLD99 RS08045
gene id: 1628086:DLD99_RS08045
uniprot id: A0A345RMA6
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1628086:DLD99 RS18495
gene id: 1628086:DLD99_RS18495
uniprot id: A0A345RSW5
names: Function
names: Similarity
names: Subunit
messages: ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
messages: Belongs to the ClpX chaperone family.
messages: Component of the ClpX-ClpP complex. Forms a hexameric ring that, in the presence of ATP, binds to fourteen ClpP subunits assembled into a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.

1628086:DLD99 RS02215
gene id: 1628086:DLD99_RS02215
uniprot id: A0A345RJ61
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PRA-PH family.
messages: Cytoplasm

1628086:DLD99 RS22225
gene id: 1628086:DLD99_RS22225
uniprot id: A0A345RUV8
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the radical SAM superfamily. 7-carboxy-7-deazaguanine synthase family.
messages: Binds 1 S-adenosyl-L-methionine per subunit.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS06420
gene id: 1628086:DLD99_RS06420
uniprot id: A0A345RLF2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the sigma-70 factor family. RpoS subfamily.
messages: Cytoplasm
messages: Interacts with the RNA polymerase core enzyme.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.

1628086:DLD99 RS04160
gene id: 1628086:DLD99_RS04160
uniprot id: A0A345RK74
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Fur family.
messages: Cytoplasm
messages: Homodimer.

1628086:DLD99 RS07720
gene id: 1628086:DLD99_RS07720
uniprot id: A0A345RM42
names: Similarity
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.

1628086:DLD99 RS25630
gene id: 1628086:DLD99_RS25630
uniprot id: A0A345RWP5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.
messages: Membrane

1628086:DLD99 RS17865
gene id: 1628086:DLD99_RS17865
uniprot id: A0A345RSJ3
names: Similarity
messages: Belongs to the DsrF/TusC family.

1628086:DLD99 RS04690
gene id: 1628086:DLD99_RS04690
uniprot id: A0A345RKH4
names: Function
names: Similarity
messages: Belongs to the ABC transporter superfamily. Outer membrane lipopolysaccharide export (TC 1.B.42) family.
messages: Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. Probably responsible for energy coupling to the transport system.

1628086:DLD99 RS21635
gene id: 1628086:DLD99_RS21635
uniprot id: A0A345RUJ7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane

1628086:DLD99 RS10470
gene id: 1628086:DLD99_RS10470
uniprot id: A0A345RNL0
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

1628086:DLD99 RS28195
gene id: 1628086:DLD99_RS28195
uniprot id: A0A345RY35
names: Similarity
messages: Belongs to the RutC family.

1628086:DLD99 RS25870
gene id: 1628086:DLD99_RS25870
uniprot id: A0A345RWU2
names: Function
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.

1628086:DLD99 RS04805
gene id: 1628086:DLD99_RS04805
uniprot id: A0A345RKJ7
names: Similarity
messages: Belongs to the glutathione peroxidase family.

1628086:DLD99 RS28470
gene id: 1628086:DLD99_RS28470
uniprot id: A0A345RY86
names: Function
messages: This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by PhoB and PhoR when phosphate is limited.

1628086:DLD99 RS08265
gene id: 1628086:DLD99_RS08265
uniprot id: A0A345RMF0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
messages: Bacterial flagellum basal body
messages: Belongs to the FlgH family.
messages: Cell outer membrane
messages: Membrane
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod.

1628086:DLD99 RS06320
gene id: 1628086:DLD99_RS06320
uniprot id: A0A345RLD2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioester dehydratase family. FabZ subfamily.
messages: Cytoplasm
messages: Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.

1628086:DLD99 RS27145
gene id: 1628086:DLD99_RS27145
uniprot id: A0A345RXI1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ThiG family.
messages: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
messages: Cytoplasm
messages: Homotetramer. Forms heterodimers with either ThiH or ThiS.

1628086:DLD99 RS11590
gene id: 1628086:DLD99_RS11590
uniprot id: A0A345RP73
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNase H family.
messages: Binds 1 Mg(2+) ion per subunit. May bind a second metal ion at a regulatory site, or after substrate binding.
messages: Cytoplasm
messages: Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
messages: Monomer.

1628086:DLD99 RS24750
gene id: 1628086:DLD99_RS24750
uniprot id: A0A345RW80
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL21 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L20.
messages: This protein binds to 23S rRNA in the presence of protein L20.

1628086:DLD99 RS27735
gene id: 1628086:DLD99_RS27735
uniprot id: A0A345RXU6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Rho family.
messages: Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.
messages: Homohexamer. The homohexamer assembles into an open ring structure.

1628086:DLD99 RS22270
gene id: 1628086:DLD99_RS22270
uniprot id: A0A345RUW7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RuvA family.
messages: Forms a complex with RuvB.
messages: The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.

1628086:DLD99 RS25890
gene id: 1628086:DLD99_RS25890
uniprot id: A0A345RWU6
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL3 family.
messages: Methylated by PrmB.
messages: One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19.

1628086:DLD99 RS25280
gene id: 1628086:DLD99_RS25280
uniprot id: A0A345RWI0
names: Function
names: Similarity
messages: Belongs to the peptidase S11 family.
messages: Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.

1628086:DLD99 RS20825
gene id: 1628086:DLD99_RS20825
uniprot id: A0A345RU55
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PlsX family.
messages: Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
messages: Cytoplasm
messages: Homodimer. Probably interacts with PlsY.

1628086:DLD99 RS01305
gene id: 1628086:DLD99_RS01305
uniprot id: A0A345RIP9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1628086:DLD99 RS04395
gene id: 1628086:DLD99_RS04395
uniprot id: A0A345RKB7
names: Similarity
messages: Belongs to the Orn/Lys/Arg decarboxylase class-II family.

1628086:DLD99 RS10970
gene id: 1628086:DLD99_RS10970
uniprot id: A0A345RNV4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial solute-binding protein 3 family.
messages: Periplasm

1628086:DLD99 RS25850
gene id: 1628086:DLD99_RS25850
uniprot id: A0A345RWT8
names: Similarity
messages: Belongs to the universal ribosomal protein uL29 family.

1628086:DLD99 RS26815
gene id: 1628086:DLD99_RS26815
uniprot id: A0A345RXB6
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the class II fructose-bisphosphate aldolase family.
messages: Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.
messages: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
messages: One is catalytic and the other provides a structural contribution.

1628086:DLD99 RS22300
gene id: 1628086:DLD99_RS22300
uniprot id: A0A345RUX3
names: Similarity
messages: Belongs to the Dps family.

1628086:DLD99 RS06275
gene id: 1628086:DLD99_RS06275
uniprot id: A0A345RLC3
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UMP kinase family.
messages: Catalyzes the reversible phosphorylation of UMP to UDP.
messages: Cytoplasm
messages: Homohexamer.
messages: Inhibited by UTP.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS02925
gene id: 1628086:DLD99_RS02925
uniprot id: A0A345RJJ8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
messages: Cytoplasm
messages: GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
messages: Monomer. Associates with the 50S ribosomal subunit.

1628086:DLD99 RS18035
gene id: 1628086:DLD99_RS18035
uniprot id: A0A345RSM6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 1 family.
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 13 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.

1628086:DLD99 RS18500
gene id: 1628086:DLD99_RS18500
uniprot id: A0A345RSW6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase S14 family.
messages: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.
messages: Cytoplasm
messages: Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.

1628086:DLD99 RS25825
gene id: 1628086:DLD99_RS25825
uniprot id: A0A345RWT3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS14 family.
messages: Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
messages: Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.

1628086:DLD99 RS04260
gene id: 1628086:DLD99_RS04260
uniprot id: A0A345RK92
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NusA family.
messages: Cytoplasm
messages: Monomer. Binds directly to the core enzyme of the DNA-dependent RNA polymerase and to nascent RNA.
messages: Participates in both transcription termination and antitermination.

1628086:DLD99 RS25800
gene id: 1628086:DLD99_RS25800
uniprot id: A0A345RWS8
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL30 family.
messages: Part of the 50S ribosomal subunit.

1628086:DLD99 RS02060
gene id: 1628086:DLD99_RS02060
uniprot id: A0A345RJ31
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FBPase class 1 family.
messages: Binds 2 magnesium ions per subunit.
messages: Cytoplasm
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS03700
gene id: 1628086:DLD99_RS03700
uniprot id: A0A345RJZ4
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenine deaminase type 2 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.

1628086:DLD99 RS02230
gene id: 1628086:DLD99_RS02230
uniprot id: A0A345RJ64
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UbiJ family.
messages: Cytoplasm
messages: Required for ubiquinone (coenzyme Q) biosynthesis. Binds hydrophobic ubiquinone biosynthetic intermediates via its SCP2 domain and is essential for the stability of the Ubi complex. May constitute a docking platform where Ubi enzymes assemble and access their SCP2-bound polyprenyl substrates.

1628086:DLD99 RS10550
gene id: 1628086:DLD99_RS10550
uniprot id: A0A345RNM6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial histone-like protein family.
messages: Heterodimer of an alpha and a beta chain.
messages: This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control.

1628086:DLD99 RS16790
gene id: 1628086:DLD99_RS16790
uniprot id: A0A345RRZ1
names: Subcellular Location Annotation
messages: Membrane

1628086:DLD99 RS08440
gene id: 1628086:DLD99_RS08440
uniprot id: A0A345RMI4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliG family.
messages: Cell inner membrane
messages: FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
messages: Membrane

1628086:DLD99 RS28155
gene id: 1628086:DLD99_RS28155
uniprot id: A0A345RY27
names: Similarity
messages: Belongs to the DNA repair enzymes AP/ExoA family.

1628086:DLD99 RS14620
gene id: 1628086:DLD99_RS14620
uniprot id: A0A345RQT2
names: Similarity
messages: Belongs to the acyl-CoA dehydrogenase family.

1628086:DLD99 RS01120
gene id: 1628086:DLD99_RS01120
uniprot id: A0A345RIL3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the exbB/tolQ family.
messages: Membrane

1628086:DLD99 RS17930
gene id: 1628086:DLD99_RS17930
uniprot id: A0A345RSK6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

1628086:DLD99 RS01115
gene id: 1628086:DLD99_RS01115
uniprot id: A0A345RIL2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TonB family.
messages: Cell inner membrane

1628086:DLD99 RS17910
gene id: 1628086:DLD99_RS17910
uniprot id: A0A345RSK2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LolA family.
messages: Monomer.
messages: Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
messages: Periplasm

1628086:DLD99 RS05500
gene id: 1628086:DLD99_RS05500
uniprot id: A0A345RKY1
names: Similarity
messages: Belongs to the homoserine dehydrogenase family.

1628086:DLD99 RS06800
gene id: 1628086:DLD99_RS06800
uniprot id: A0A345RLM4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane

1628086:DLD99 RS06805
gene id: 1628086:DLD99_RS06805
uniprot id: A0A345RLM5
names: Similarity
messages: Belongs to the bacterial solute-binding protein 3 family.

1628086:DLD99 RS09490
gene id: 1628086:DLD99_RS09490
uniprot id: A0A345RN28
names: Subcellular Location Annotation
messages: Membrane

1628086:DLD99 RS01125
gene id: 1628086:DLD99_RS01125
uniprot id: A0A345RIL4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

1628086:DLD99 RS07615
gene id: 1628086:DLD99_RS07615
uniprot id: A0A345RM22
names: Similarity
messages: Belongs to the SAICAR synthetase family.

1628086:DLD99 RS02200
gene id: 1628086:DLD99_RS02200
uniprot id: A0A345RJ58
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TatC family.
messages: Cell membrane
messages: Membrane
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
messages: The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon.

1628086:DLD99 RS06355
gene id: 1628086:DLD99_RS06355
uniprot id: A0A345RLD9
names: Activity Regulation
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Allosterically activated by GTP, when glutamine is the substrate; GTP has no effect on the reaction when ammonia is the substrate. The allosteric effector GTP functions by stabilizing the protein conformation that binds the tetrahedral intermediate(s) formed during glutamine hydrolysis. Inhibited by the product CTP, via allosteric rather than competitive inhibition.
messages: Belongs to the CTP synthase family.
messages: CTPSs have evolved a hybrid strategy for distinguishing between UTP and CTP. The overlapping regions of the product feedback inhibitory and substrate sites recognize a common feature in both compounds, the triphosphate moiety. To differentiate isosteric substrate and product pyrimidine rings, an additional pocket far from the expected kinase/ligase catalytic site, specifically recognizes the cytosine and ribose portions of the product inhibitor.
messages: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS27990
gene id: 1628086:DLD99_RS27990
uniprot id: A0A345RXZ4
names: Similarity
messages: Belongs to the P(II) protein family.

1628086:DLD99 RS20185
gene id: 1628086:DLD99_RS20185
uniprot id: A0A345RTS9
names: Function
names: Similarity
messages: Belongs to the GreA/GreB family. GreB subfamily.
messages: Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.

1628086:DLD99 RS28225
gene id: 1628086:DLD99_RS28225
uniprot id: A0A345RY41
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1628086:DLD99 RS25810
gene id: 1628086:DLD99_RS25810
uniprot id: A0A345RWT0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL18 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.
messages: This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.

1628086:DLD99 RS04985
gene id: 1628086:DLD99_RS04985
uniprot id: A0A345RKN0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsiE family.
messages: Cell inner membrane
messages: Membrane

1628086:DLD99 RS23415
gene id: 1628086:DLD99_RS23415
uniprot id: A0A345RVI7
names: Function
names: Similarity
messages: A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
messages: Belongs to the NifU family.

1628086:DLD99 RS01345
gene id: 1628086:DLD99_RS01345
uniprot id: A0A345RIQ7
names: Cofactor
names: Similarity
messages: Belongs to the RimK family.
messages: Binds 2 magnesium or manganese ions per subunit.

1628086:DLD99 RS00355
gene id: 1628086:DLD99_RS00355
uniprot id: A0A345RI70
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1628086:DLD99 RS28115
gene id: 1628086:DLD99_RS28115
uniprot id: A0A345RY19
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL28 family.

1628086:DLD99 RS13075
gene id: 1628086:DLD99_RS13075
uniprot id: A0A345RPZ8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BI1 family.
messages: Membrane

1628086:DLD99 RS09730
gene id: 1628086:DLD99_RS09730
uniprot id: A0A345RN75
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

1628086:DLD99 RS20900
gene id: 1628086:DLD99_RS20900
uniprot id: A0A345RU70
names: Similarity
messages: Belongs to the UPF0434 family.

1628086:DLD99 RS01075
gene id: 1628086:DLD99_RS01075
uniprot id: A0A345RIK4
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1628086:DLD99 RS27575
gene id: 1628086:DLD99_RS27575
uniprot id: A0A345RXR6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acetyltransferase family. ArgA subfamily.
messages: Cytoplasm

1628086:DLD99 RS20640
gene id: 1628086:DLD99_RS20640
uniprot id: A0A345RU19
names: Similarity
messages: Belongs to the ETF beta-subunit/FixA family.

1628086:DLD99 RS22580
gene id: 1628086:DLD99_RS22580
uniprot id: A0A345RV26
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1628086:DLD99 RS27360
gene id: 1628086:DLD99_RS27360
uniprot id: A0A345RXM4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Lgt family.
messages: Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.
messages: Cell membrane

1628086:DLD99 RS25780
gene id: 1628086:DLD99_RS25780
uniprot id: A0A345RWS4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS13 family.
messages: Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.
messages: Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome.

1628086:DLD99 RS20115
gene id: 1628086:DLD99_RS20115
uniprot id: A0A345RTR5
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1628086:DLD99 RS05335
gene id: 1628086:DLD99_RS05335
uniprot id: A0A345RKU8
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S26 family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

1628086:DLD99 RS00335
gene id: 1628086:DLD99_RS00335
uniprot id: A0A345RI66
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-3 integral membrane protein family.
messages: Cell membrane
messages: Membrane

1628086:DLD99 RS06620
gene id: 1628086:DLD99_RS06620
uniprot id: A0A345RLJ1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecX family.
messages: Cytoplasm
messages: Modulates RecA activity.

1628086:DLD99 RS06260
gene id: 1628086:DLD99_RS06260
uniprot id: A0A345RLC0
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
messages: Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.
messages: Monomer.
messages: Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed.

1628086:DLD99 RS00290
gene id: 1628086:DLD99_RS00290
uniprot id: A0A345RI57
names: PTM
messages: Binds 2 heme c groups covalently per subunit.

1628086:DLD99 RS28495
gene id: 1628086:DLD99_RS28495
uniprot id: A0A345RY91
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PhoU family.
messages: Cytoplasm
messages: Homodimer.
messages: Plays a role in the regulation of phosphate uptake.

1628086:DLD99 RS26230
gene id: 1628086:DLD99_RS26230
uniprot id: A0A345RX02
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GlpE family.
messages: Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
messages: Cytoplasm

1628086:DLD99 RS09410
gene id: 1628086:DLD99_RS09410
uniprot id: A0A345RN12
names: Similarity
names: Subunit
messages: Belongs to the GTP cyclohydrolase I family.
messages: Homopolymer.

1628086:DLD99 RS02665
gene id: 1628086:DLD99_RS02665
uniprot id: A0A345RJE8
names: Similarity
messages: Belongs to the NodU/CmcH family.

1628086:DLD99 RS25940
gene id: 1628086:DLD99_RS25940
uniprot id: A0A345RWV6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL1 family.
messages: Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
messages: Part of the 50S ribosomal subunit.
messages: Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.

1628086:DLD99 RS03095
gene id: 1628086:DLD99_RS03095
uniprot id: A0A345RJM9
names: Similarity
messages: Belongs to the ABC transporter superfamily.

1628086:DLD99 RS11640
gene id: 1628086:DLD99_RS11640
uniprot id: A0A345RP83
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD kinase family.
messages: Cytoplasm
messages: Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS08870
gene id: 1628086:DLD99_RS08870
uniprot id: A0A345RMR4
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the succinate/malate CoA ligase beta subunit family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Heterotetramer of two alpha and two beta subunits.
messages: Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.

1628086:DLD99 RS00985
gene id: 1628086:DLD99_RS00985
uniprot id: A0A345RII6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the prokaryotic sulfate-binding protein family.
messages: Periplasm

1628086:DLD99 RS26675
gene id: 1628086:DLD99_RS26675
uniprot id: A0A345RX88
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 3-hydroxyacyl-CoA dehydrogenase family. L-carnitine dehydrogenase subfamily.
messages: Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3-dehydrocarnitine.
messages: Cytoplasm
messages: Homodimer.

1628086:DLD99 RS25910
gene id: 1628086:DLD99_RS25910
uniprot id: A0A345RWV0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS7 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
messages: Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.

1628086:DLD99 RS22855
gene id: 1628086:DLD99_RS22855
uniprot id: A0A345RV80
names: Similarity
messages: Belongs to the glutaredoxin family. Monothiol subfamily.

1628086:DLD99 RS23705
gene id: 1628086:DLD99_RS23705
uniprot id: A0A345RVP1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsA/MreB family.
messages: Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring.
messages: Cell membrane
messages: Self-interacts. Interacts with FtsZ.

1628086:DLD99 RS10425
gene id: 1628086:DLD99_RS10425
uniprot id: A0A345RNK1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).
messages: Belongs to the CsrA/RsmA family.
messages: Cytoplasm
messages: Homodimer; the beta-strands of each monomer intercalate to form a hydrophobic core, while the alpha-helices form wings that extend away from the core.

1628086:DLD99 RS19860
gene id: 1628086:DLD99_RS19860
uniprot id: A0A345RTL6
names: Function
names: Similarity
messages: Belongs to the nucleoside phosphorylase PpnP family.
messages: Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.

1628086:DLD99 RS25305
gene id: 1628086:DLD99_RS25305
uniprot id: A0A345RWI5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA methyltransferase RlmH family.
messages: Cytoplasm
messages: Homodimer.
messages: Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA.

1628086:DLD99 RS25900
gene id: 1628086:DLD99_RS25900
uniprot id: A0A345RWU8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: Cytoplasm
messages: Monomer.
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.

1628086:DLD99 RS06765
gene id: 1628086:DLD99_RS06765
uniprot id: A0A345RLL7
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the dCTP deaminase family.
messages: Catalyzes the deamination of dCTP to dUTP.
messages: Homotrimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS05460
gene id: 1628086:DLD99_RS05460
uniprot id: A0A345RKX3
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS16 family.

1628086:DLD99 RS02985
gene id: 1628086:DLD99_RS02985
uniprot id: A0A345RJK8
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS6 family.
messages: Binds together with S18 to 16S ribosomal RNA.

1628086:DLD99 RS08260
gene id: 1628086:DLD99_RS08260
uniprot id: A0A345RME9
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.

1628086:DLD99 RS15695
gene id: 1628086:DLD99_RS15695
uniprot id: A0A345RRD6
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NfuA family.
messages: Binds 1 [4Fe-4S] cluster per subunit. The cluster is presumably bound at the interface of two monomers.
messages: Homodimer.
messages: Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.

1628086:DLD99 RS15300
gene id: 1628086:DLD99_RS15300
uniprot id: A0A345RR64
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
messages: Cytoplasm
messages: Homodimer.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.

1628086:DLD99 RS01190
gene id: 1628086:DLD99_RS01190
uniprot id: A0A345RIM7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1628086:DLD99 RS03445
gene id: 1628086:DLD99_RS03445
uniprot id: A0A345RJU4
names: Function
messages: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.

1628086:DLD99 RS04135
gene id: 1628086:DLD99_RS04135
uniprot id: A0A345RK69
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SmpB family.
messages: Cytoplasm
messages: Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation. The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.

1628086:DLD99 RS25880
gene id: 1628086:DLD99_RS25880
uniprot id: A0A345RWU4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.
messages: Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.

1628086:DLD99 RS16995
gene id: 1628086:DLD99_RS16995
uniprot id: A0A345RS29
names: Function
names: Similarity
messages: Belongs to the cyanase family.
messages: Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide.

1628086:DLD99 RS16145
gene id: 1628086:DLD99_RS16145
uniprot id: A0A345RRM2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP H family.
messages: Cell inner membrane
messages: Membrane

1628086:DLD99 RS23590
gene id: 1628086:DLD99_RS23590
uniprot id: A0A345RVM0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome c oxidase subunit 3 family.
messages: Cell membrane
messages: Cytochrome bo(3) ubiquinol terminal oxidase is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration. Has proton pump activity across the membrane in addition to electron transfer, pumping 2 protons/electron.
messages: Heterooctamer of two A chains, two B chains, two C chains and two D chains.
messages: Membrane

1628086:DLD99 RS22750
gene id: 1628086:DLD99_RS22750
uniprot id: A0A345RV59
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GroES chaperonin family.
messages: Cytoplasm
messages: Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.
messages: Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.

1628086:DLD99 RS04240
gene id: 1628086:DLD99_RS04240
uniprot id: A0A345RK90
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SecG family.
messages: Cell membrane
messages: Involved in protein export. Participates in an early event of protein translocation.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

1628086:DLD99 RS18060
gene id: 1628086:DLD99_RS18060
uniprot id: A0A345RSN1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 4 family.
messages: Membrane

1628086:DLD99 RS09895
gene id: 1628086:DLD99_RS09895
uniprot id: A0A345RYQ6
names: Function
names: Similarity
messages: Belongs to the RecR family.
messages: May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.

1628086:DLD99 RS00015
gene id: 1628086:DLD99_RS00015
uniprot id: A0A345RI04
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecF family.
messages: Cytoplasm
messages: The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.

1628086:DLD99 RS07575
gene id: 1628086:DLD99_RS07575
uniprot id: A0A345RM15
names: Similarity
messages: Belongs to the sulfur carrier protein TusA family.

1628086:DLD99 RS24360
gene id: 1628086:DLD99_RS24360
uniprot id: A0A345RW08
names: Function
names: Similarity
names: Subunit
messages: Belongs to the acetolactate synthase small subunit family.
messages: Catalyzes the conversion of 2 pyruvate molecules into acetolactate in the first common step of the biosynthetic pathway of the branched-amino acids such as leucine, isoleucine, and valine.
messages: Dimer of large and small chains.

1628086:DLD99 RS28960
gene id: 1628086:DLD99_RS28960
uniprot id: A0A345RYI1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase C chain family.
messages: Cell membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.
messages: Membrane

1628086:DLD99 RS06310
gene id: 1628086:DLD99_RS06310
uniprot id: A0A345RLD0
names: Similarity
messages: Belongs to the Skp family.

1628086:DLD99 RS07095
gene id: 1628086:DLD99_RS07095
uniprot id: A0A345RLS7
names: Similarity
messages: Belongs to the intradiol ring-cleavage dioxygenase family.

1628086:DLD99 RS25195
gene id: 1628086:DLD99_RS25195
uniprot id: A0A345RWG3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the methylthiotransferase family. MiaB subfamily.
messages: Binds 2 [4Fe-4S] clusters. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
messages: Cytoplasm
messages: Monomer.

1628086:DLD99 RS06370
gene id: 1628086:DLD99_RS06370
uniprot id: A0A345RLE2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsB family.
messages: Cell inner membrane
messages: Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
messages: Part of a complex composed of FtsB, FtsL and FtsQ.

1628086:DLD99 RS25855
gene id: 1628086:DLD99_RS25855
uniprot id: A0A345RWT9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
messages: Part of the 50S ribosomal subunit.

1628086:DLD99 RS15585
gene id: 1628086:DLD99_RS15585
uniprot id: A0A345RRB5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Membrane

1628086:DLD99 RS27285
gene id: 1628086:DLD99_RS27285
uniprot id: A0A345RXK9
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IlvD/Edd family.
messages: Binds 1 [2Fe-2S] cluster per subunit. This cluster acts as a Lewis acid cofactor.
messages: Functions in the biosynthesis of branched-chain amino acids. Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS24260
gene id: 1628086:DLD99_RS24260
uniprot id: A0A345RVZ4
names: Function
names: Similarity
messages: Belongs to the beta-class carbonic anhydrase family.
messages: Reversible hydration of carbon dioxide.

1628086:DLD99 RS09375
gene id: 1628086:DLD99_RS09375
uniprot id: A0A345RN05
names: Function
names: Similarity
names: Subunit
messages: Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
messages: Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU).
messages: Homotetramer.

1628086:DLD99 RS02980
gene id: 1628086:DLD99_RS02980
uniprot id: A0A345RJK7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. RlmB subfamily.
messages: Cytoplasm
messages: Specifically methylates the ribose of guanosine 2251 in 23S rRNA.

1628086:DLD99 RS22330
gene id: 1628086:DLD99_RS22330
uniprot id: A0A345RUX8
names: Similarity
messages: Belongs to the UPF0234 family.

1628086:DLD99 RS24960
gene id: 1628086:DLD99_RS24960
uniprot id: A0A345RWC0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the type-II 3-dehydroquinase family.
messages: Catalyzes a trans-dehydration via an enolate intermediate.
messages: Homododecamer.

1628086:DLD99 RS25785
gene id: 1628086:DLD99_RS25785
uniprot id: A0A345RWS5
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL36 family.

1628086:DLD99 RS29020
gene id: 1628086:DLD99_RS29020
uniprot id: A0A345RYJ3
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL34 family.

1628086:DLD99 RS27380
gene id: 1628086:DLD99_RS27380
uniprot id: A0A345RXM8
names: Function
names: Similarity
messages: Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage.
messages: Belongs to the Nudix hydrolase family. RppH subfamily.

1628086:DLD99 RS02395
gene id: 1628086:DLD99_RS02395
uniprot id: A0A345RJ95
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1628086:DLD99 RS02495
gene id: 1628086:DLD99_RS02495
uniprot id: A0A345RJB4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.
messages: Belongs to the acyl carrier protein (ACP) family.
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis.
messages: Cytoplasm

1628086:DLD99 RS20435
gene id: 1628086:DLD99_RS20435
uniprot id: A0A345RTX8
names: Function
names: Subcellular Location Annotation
messages: Catalyzes the Claisen rearrangement of chorismate to prephenate and the decarboxylation/dehydration of prephenate to phenylpyruvate.
messages: Cytoplasm

1628086:DLD99 RS20810
gene id: 1628086:DLD99_RS20810
uniprot id: A0A345RU52
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS.
messages: Belongs to the acyl carrier protein (ACP) family.
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis.
messages: Cytoplasm

1628086:DLD99 RS08240
gene id: 1628086:DLD99_RS08240
uniprot id: A0A345RME5
names: Similarity
messages: Belongs to the pterin-4-alpha-carbinolamine dehydratase family.

1628086:DLD99 RS24725
gene id: 1628086:DLD99_RS24725
uniprot id: A0A345RW75
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS20 family.
messages: Binds directly to 16S ribosomal RNA.

1628086:DLD99 RS20405
gene id: 1628086:DLD99_RS20405
uniprot id: A0A345RTX2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial histone-like protein family.
messages: Heterodimer of an alpha and a beta chain.
messages: This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control.

1628086:DLD99 RS05180
gene id: 1628086:DLD99_RS05180
uniprot id: A0A345RKR7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the MoaC family.
messages: Catalyzes the conversion of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP).
messages: Homohexamer; trimer of dimers.

1628086:DLD99 RS21310
gene id: 1628086:DLD99_RS21310
uniprot id: A0A345RUE5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.
messages: Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of a number of rings mounted on a central rod.

1628086:DLD99 RS25895
gene id: 1628086:DLD99_RS25895
uniprot id: A0A345RWU7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS10 family.
messages: Involved in the binding of tRNA to the ribosomes.
messages: Part of the 30S ribosomal subunit.

1628086:DLD99 RS20910
gene id: 1628086:DLD99_RS20910
uniprot id: A0A345RU72
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

1628086:DLD99 RS22670
gene id: 1628086:DLD99_RS22670
uniprot id: A0A345RV44
names: Function
names: Similarity
messages: Belongs to the iron/manganese superoxide dismutase family.
messages: Destroys radicals which are normally produced within the cells and which are toxic to biological systems.

1628086:DLD99 RS26135
gene id: 1628086:DLD99_RS26135
uniprot id: A0A345RWY5
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the ribulose-phosphate 3-epimerase family.
messages: Binds 1 divalent metal cation per subunit.
messages: Catalyzes the reversible epimerization of D-ribulose 5-phosphate to D-xylulose 5-phosphate.

1628086:DLD99 RS02835
gene id: 1628086:DLD99_RS02835
uniprot id: A0A345RJI0
names: Similarity
messages: Belongs to the HAD-like hydrolase superfamily. SerB family.

1628086:DLD99 RS04535
gene id: 1628086:DLD99_RS04535
uniprot id: A0A345RKE5
names: Similarity
messages: Belongs to the DapA family.

1628086:DLD99 RS28550
gene id: 1628086:DLD99_RS28550
uniprot id: A0A345RYA2
names: Function
names: Similarity
messages: Belongs to the AIR carboxylase family. Class I subfamily.
messages: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).

1628086:DLD99 RS24825
gene id: 1628086:DLD99_RS24825
uniprot id: A0A345RW95
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A translation factor that gates the progression of the 70S ribosomal initiation complex (IC, containing tRNA(fMet) in the P-site) into the translation elongation cycle by using a mechanism sensitive to the ATP/ADP ratio. Binds to the 70S ribosome E-site where it modulates the state of the translating ribosome during subunit translocation. ATP hydrolysis probably frees it from the ribosome, which can enter the elongation phase.
messages: Belongs to the ABC transporter superfamily. ABCF family. Translational throttle EttA subfamily.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer. Probably contacts ribosomal proteins L1, L5, L33 and S7, the 16S and 23S rRNA and the P-site containing tRNA(fMet).
messages: The P-site tRNA interaction motif (PtIM domain) probably interacts with the P-site tRNA(fMet) as well as the 23S rRNA.
messages: The arm domain is inserted in the first ABC transporter domain. Probably contacts ribosomal protein L1.

1628086:DLD99 RS01140
gene id: 1628086:DLD99_RS01140
uniprot id: A0A345RIL7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nlpA lipoprotein family.
messages: Membrane

1628086:DLD99 RS27725
gene id: 1628086:DLD99_RS27725
uniprot id: A0A345RXU4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UbiD family.
messages: Binds 1 prenylated FMN (prenyl-FMN) per subunit.
messages: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.
messages: Cell membrane
messages: Homohexamer.

1628086:DLD99 RS25085
gene id: 1628086:DLD99_RS25085
uniprot id: A0A345RWE3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1628086:DLD99 RS13520
gene id: 1628086:DLD99_RS13520
uniprot id: A0A345RQ81
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ElaB/YgaM/YqjD family.
messages: Cell inner membrane
messages: Membrane

1628086:DLD99 RS03000
gene id: 1628086:DLD99_RS03000
uniprot id: A0A345RJL1
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL9 family.
messages: Binds to the 23S rRNA.

1628086:DLD99 RS17405
gene id: 1628086:DLD99_RS17405
uniprot id: A0A345RSA7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Cell membrane
messages: Membrane

1628086:DLD99 RS03420
gene id: 1628086:DLD99_RS03420
uniprot id: A0A345RJT9
names: Similarity
messages: Belongs to the transcriptional regulatory Fis family.

1628086:DLD99 RS24140
gene id: 1628086:DLD99_RS24140
uniprot id: A0A345RVX2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Cytoplasm
messages: Homohexamer.
messages: Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P).

1628086:DLD99 RS03080
gene id: 1628086:DLD99_RS03080
uniprot id: A0A345RJM6
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

1628086:DLD99 RS08270
gene id: 1628086:DLD99_RS08270
uniprot id: A0A345RMF1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
messages: Bacterial flagellum basal body
messages: Belongs to the FlgI family.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod.

1628086:DLD99 RS02210
gene id: 1628086:DLD99_RS02210
uniprot id: A0A345RJ60
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TatA/E family.
messages: Cell membrane
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
messages: The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon.

1628086:DLD99 RS23395
gene id: 1628086:DLD99_RS23395
uniprot id: A0A345RVI3
names: Similarity
messages: Belongs to the adrenodoxin/putidaredoxin family.

1628086:DLD99 RS20830
gene id: 1628086:DLD99_RS20830
uniprot id: A0A345RU56
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL32 family.

1628086:DLD99 RS27670
gene id: 1628086:DLD99_RS27670
uniprot id: A0A345RXT5
names: Function
names: Similarity
names: Subunit
messages: Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
messages: Belongs to the ZapA family. Type 1 subfamily.
messages: Homodimer. Interacts with FtsZ.

1628086:DLD99 RS23365
gene id: 1628086:DLD99_RS23365
uniprot id: A0A345RVH7
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the IspG family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.

1628086:DLD99 RS24690
gene id: 1628086:DLD99_RS24690
uniprot id: A0A345RW69
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the IspH family.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis.

1628086:DLD99 RS20895
gene id: 1628086:DLD99_RS20895
uniprot id: A0A345RU69
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
messages: Belongs to the KdsB family.
messages: Cytoplasm

1628086:DLD99 RS00590
gene id: 1628086:DLD99_RS00590
uniprot id: A0A345RIB7
names: Function
messages: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane.

1628086:DLD99 RS26165
gene id: 1628086:DLD99_RS26165
uniprot id: A0A345RWZ0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
messages: Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
messages: The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD).

1628086:DLD99 RS22395
gene id: 1628086:DLD99_RS22395
uniprot id: A0A345RUZ0
names: Function
names: Similarity
messages: Belongs to the PurU family.
messages: Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).

1628086:DLD99 RS24780
gene id: 1628086:DLD99_RS24780
uniprot id: A0A345RW86
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0114 family.
messages: Cell membrane
messages: Membrane

1628086:DLD99 RS07705
gene id: 1628086:DLD99_RS07705
uniprot id: A0A345RM39
names: Similarity
messages: Belongs to the UPF0260 family.

1628086:DLD99 RS19435
gene id: 1628086:DLD99_RS19435
uniprot id: A0A345RTE2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sulfur carrier protein TusA family.
messages: Cytoplasm
messages: Sulfur carrier protein which probably makes part of a sulfur-relay system.

1628086:DLD99 RS00325
gene id: 1628086:DLD99_RS00325
uniprot id: A0A345RI64
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Fur family.
messages: Cytoplasm
messages: Homodimer.

1628086:DLD99 RS02935
gene id: 1628086:DLD99_RS02935
uniprot id: A0A345RJK0
names: Function
names: Similarity
messages: Belongs to the band 7/mec-2 family. HflC subfamily.
messages: HflC and HflK could regulate a protease.

1628086:DLD99 RS18255
gene id: 1628086:DLD99_RS18255
uniprot id: A0A345RSR8
names: Similarity
messages: Belongs to the acyl-CoA dehydrogenase family.

1628086:DLD99 RS25915
gene id: 1628086:DLD99_RS25915
uniprot id: A0A345RWV1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.
messages: With S4 and S5 plays an important role in translational accuracy.

1628086:DLD99 RS09905
gene id: 1628086:DLD99_RS09905
uniprot id: A0A345RNA8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
messages: Cytoplasm
messages: Homodimer.

1628086:DLD99 RS08245
gene id: 1628086:DLD99_RS08245
uniprot id: A0A345RME6
names: Similarity
messages: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family.

1628086:DLD99 RS28525
gene id: 1628086:DLD99_RS28525
uniprot id: A0A345RY97
names: Similarity
messages: Belongs to the acyl coenzyme A hydrolase family.

1628086:DLD99 RS23830
gene id: 1628086:DLD99_RS23830
uniprot id: A0A345RVR4
names: Similarity
messages: Belongs to the universal ribosomal protein uS9 family.

1628086:DLD99 RS26080
gene id: 1628086:DLD99_RS26080
uniprot id: A0A345RWX4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the COQ7 family.
messages: Binds 2 iron ions per subunit.
messages: Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
messages: Cell membrane

1628086:DLD99 RS10535
gene id: 1628086:DLD99_RS10535
uniprot id: A0A345RNM3
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.

1628086:DLD99 RS08685
gene id: 1628086:DLD99_RS08685
uniprot id: A0A345RMN0
names: Similarity
messages: Belongs to the HicA mRNA interferase family.

1628086:DLD99 RS25750
gene id: 1628086:DLD99_RS25750
uniprot id: A0A345RWR8
names: Function
names: Similarity
messages: Belongs to the bacterioferritin family.
messages: Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex.

1628086:DLD99 RS18000
gene id: 1628086:DLD99_RS18000
uniprot id: A0A345RSL9
names: Cofactor
messages: Can also use Mn(2+) ion.

1628086:DLD99 RS23580
gene id: 1628086:DLD99_RS23580
uniprot id: A0A345RVL8
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.
messages: Carbon 2 of the heme B porphyrin ring is defined according to the Fischer nomenclature.
messages: Cell membrane
messages: Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
messages: Membrane

1628086:DLD99 RS27510
gene id: 1628086:DLD99_RS27510
uniprot id: A0A345RXQ4
names: Similarity
messages: Belongs to the glutamine synthetase family.

1628086:DLD99 RS07900
gene id: 1628086:DLD99_RS07900
uniprot id: A0A345RM78
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1628086:DLD99 RS19680
gene id: 1628086:DLD99_RS19680
uniprot id: A0A345RTI2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NlpA lipoprotein family.
messages: Membrane

1628086:DLD99 RS28150
gene id: 1628086:DLD99_RS28150
uniprot id: A0A345RY26
names: Function
names: Similarity
names: Subunit
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily.
messages: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
messages: Homodimer.

1628086:DLD99 RS25945
gene id: 1628086:DLD99_RS25945
uniprot id: A0A345RWV7
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL11 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
messages: One or more lysine residues are methylated.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

1628086:DLD99 RS10530
gene id: 1628086:DLD99_RS10530
uniprot id: A0A345RNM2
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL35 family.

1628086:DLD99 RS16805
gene id: 1628086:DLD99_RS16805
uniprot id: A0A345RRZ4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family.
messages: Cell membrane
messages: Membrane

1628086:DLD99 RS23795
gene id: 1628086:DLD99_RS23795
uniprot id: A0A345RVQ7
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SIS family. GmhA subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
messages: Cytoplasm
messages: Homotetramer.
messages: The reaction produces a racemic mixture of D-glycero-alpha-D-manno-heptose 7-phosphate and D-glycero-beta-D-manno-heptose 7-phosphate.

1628086:DLD99 RS26330
gene id: 1628086:DLD99_RS26330
uniprot id: A0A345RX20
names: Function
names: Similarity
messages: Belongs to the PqqB family.
messages: May be involved in the transport of PQQ or its precursor to the periplasm.

1628086:DLD99 RS06425
gene id: 1628086:DLD99_RS06425
uniprot id: A0A345RLF3
names: Function
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

1628086:DLD99 RS21315
gene id: 1628086:DLD99_RS21315
uniprot id: A0A345RUE6
names: Function
messages: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.

1628086:DLD99 RS18010
gene id: 1628086:DLD99_RS18010
uniprot id: A0A345RSM1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 20 kDa subunit family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Cell membrane
messages: NDH-1 is composed of 13 different subunits. Subunits NuoB, CD, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1628086:DLD99 RS26085
gene id: 1628086:DLD99_RS26085
uniprot id: A0A345RWX5
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.
messages: Binds 1 pyruvoyl group covalently per subunit.
messages: Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
messages: Heterooctamer of four alpha and four beta chains arranged as a tetramer of alpha/beta heterodimers.
messages: Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The post-translation cleavage follows an unusual pathway, termed non-hydrolytic serinolysis, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl group blocking the N-terminus of the alpha chain.

1628086:DLD99 RS00240
gene id: 1628086:DLD99_RS00240
uniprot id: A0A345RI47
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0391 family.
messages: Cell membrane

1628086:DLD99 RS06650
gene id: 1628086:DLD99_RS06650
uniprot id: A0A345RLJ7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial diacylglycerol kinase family.
messages: Catalyzes the ATP-dependent phosphorylation of sn-l,2-diacylglycerol (DAG) to phosphatidic acid. Involved in the recycling of diacylglycerol produced as a by-product during membrane-derived oligosaccharide (MDO) biosynthesis.
messages: Cell inner membrane
messages: Membrane

1628086:DLD99 RS02385
gene id: 1628086:DLD99_RS02385
uniprot id: A0A345RJ93
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the uroporphyrinogen decarboxylase family.
messages: Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS28940
gene id: 1628086:DLD99_RS28940
uniprot id: A0A345RYH7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase gamma chain family.
messages: Cell membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.

1628086:DLD99 RS00755
gene id: 1628086:DLD99_RS00755
uniprot id: A0A345RIE3
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1628086:DLD99 RS10510
gene id: 1628086:DLD99_RS10510
uniprot id: A0A345RNL8
names: Subcellular Location Annotation
messages: Cytoplasm

1628086:DLD99 RS20615
gene id: 1628086:DLD99_RS20615
uniprot id: A0A345RU14
names: Similarity
messages: In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

1628086:DLD99 RS09725
gene id: 1628086:DLD99_RS09725
uniprot id: A0A345RN74
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MscS (TC 1.A.23) family.
messages: Cell inner membrane
messages: Homoheptamer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell, opening in response to stretch forces in the membrane lipid bilayer, without the need for other proteins. Contributes to normal resistance to hypoosmotic shock. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions.

1628086:DLD99 RS07630
gene id: 1628086:DLD99_RS07630
uniprot id: A0A345RM24
names: Similarity
messages: Belongs to the UPF0339 family. Duplicated subfamily.

1628086:DLD99 RS25935
gene id: 1628086:DLD99_RS25935
uniprot id: A0A345RWV5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL10 family.
messages: Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

1628086:DLD99 RS25450
gene id: 1628086:DLD99_RS25450
uniprot id: A0A345RWL2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PPase family.
messages: Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
messages: Cytoplasm
messages: Homohexamer.

1628086:DLD99 RS15595
gene id: 1628086:DLD99_RS15595
uniprot id: A0A345RRB7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane
messages: Membrane

1628086:DLD99 RS17875
gene id: 1628086:DLD99_RS17875
uniprot id: A0A345RSJ5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dsrC/tusE family.
messages: Cytoplasm
messages: Part of a sulfur-relay system.

1628086:DLD99 RS03450
gene id: 1628086:DLD99_RS03450
uniprot id: A0A345RJU5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the type-II 3-dehydroquinase family.
messages: Catalyzes a trans-dehydration via an enolate intermediate.
messages: Homododecamer.

1628086:DLD99 RS19165
gene id: 1628086:DLD99_RS19165
uniprot id: A0A345RT90
names: Similarity
messages: Belongs to the UDPGP type 2 family.

1628086:DLD99 RS23460
gene id: 1628086:DLD99_RS23460
uniprot id: A0A345RVJ6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the YajC family.
messages: Cell inner membrane
messages: Membrane
messages: Part of the SecDF-YidC-YajC translocase complex. The SecDF-YidC-YajC translocase forms a supercomplex with SecYEG, called the holo-translocon (HTL).
messages: The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.

1628086:DLD99 RS08875
gene id: 1628086:DLD99_RS08875
uniprot id: A0A345RMR5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the succinate/malate CoA ligase alpha subunit family.
messages: Heterotetramer of two alpha and two beta subunits.
messages: Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.

1628086:DLD99 RS19805
gene id: 1628086:DLD99_RS19805
uniprot id: A0A345RTK6
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

1628086:DLD99 RS27175
gene id: 1628086:DLD99_RS27175
uniprot id: A0A345RXI7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Homodimer. Forms a membrane-associated complex with FtsX.
messages: Part of the ABC transporter FtsEX involved in cellular division. Important for assembly or stability of the septal ring.

1628086:DLD99 RS22090
gene id: 1628086:DLD99_RS22090
uniprot id: A0A345RUT3
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the IlvD/Edd family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Catalyzes the dehydration of 6-phospho-D-gluconate to 2-dehydro-3-deoxy-6-phospho-D-gluconate.

1628086:DLD99 RS06365
gene id: 1628086:DLD99_RS06365
uniprot id: A0A345RLE1
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the enolase family.
messages: Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
messages: Cell surface
messages: Component of the RNA degradosome, which is a multiprotein complex involved in RNA processing and mRNA degradation.
messages: Cytoplasm
messages: Secreted
messages: The covalent binding to the substrate causes inactivation of the enzyme, and possibly serves as a signal for the export of the protein.

1628086:DLD99 RS18260
gene id: 1628086:DLD99_RS18260
uniprot id: A0A345RSR9
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1628086:DLD99 RS10295
gene id: 1628086:DLD99_RS10295
uniprot id: A0A345RNH9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the LeuD family. LeuD type 1 subfamily.
messages: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.
messages: Heterodimer of LeuC and LeuD.

1628086:DLD99 RS24835
gene id: 1628086:DLD99_RS24835
uniprot id: A0A345RW97
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SHMT family.
messages: Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS27755
gene id: 1628086:DLD99_RS27755
uniprot id: A0A345RXV0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane
messages: Membrane

1628086:DLD99 RS25875
gene id: 1628086:DLD99_RS25875
uniprot id: A0A345RWU3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL2 family.
messages: One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome.

1628086:DLD99 RS28450
gene id: 1628086:DLD99_RS28450
uniprot id: A0A345RY82
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the rubredoxin family.
messages: Binds 1 Fe(3+) ion per subunit.
messages: Cytoplasm

1628086:DLD99 RS23825
gene id: 1628086:DLD99_RS23825
uniprot id: A0A345RVR3
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Rieske iron-sulfur protein family.
messages: Binds 1 [2Fe-2S] cluster per subunit.
messages: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
messages: Membrane
messages: The Rieske protein is a high potential 2Fe-2S protein.
messages: The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein.

1628086:DLD99 RS20570
gene id: 1628086:DLD99_RS20570
uniprot id: A0A345RU05
names: Similarity
messages: Belongs to the UPF0270 family.

1628086:DLD99 RS28955
gene id: 1628086:DLD99_RS28955
uniprot id: A0A345RYI0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase B chain family.
messages: Cell membrane
messages: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria.
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Membrane

1628086:DLD99 RS28440
gene id: 1628086:DLD99_RS28440
uniprot id: A0A345RY80
names: Similarity
names: Subunit
messages: Belongs to the bacterial histone-like protein family.
messages: Heterodimer of an alpha and a beta chain.

1628086:DLD99 RS28185
gene id: 1628086:DLD99_RS28185
uniprot id: A0A345RY33
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase subunit omega family.
messages: Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

1628086:DLD99 RS05610
gene id: 1628086:DLD99_RS05610
uniprot id: A0A345RL03
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1628086:DLD99 RS17495
gene id: 1628086:DLD99_RS17495
uniprot id: A0A345RSC3
names: Similarity
messages: Belongs to the FrmR/RcnR family.

1628086:DLD99 RS23410
gene id: 1628086:DLD99_RS23410
uniprot id: A0A345RVI6
names: Similarity
messages: Belongs to the HesB/IscA family.

1628086:DLD99 RS06265
gene id: 1628086:DLD99_RS06265
uniprot id: A0A345RLC1
names: Similarity
messages: Belongs to the universal ribosomal protein uS2 family.

1628086:DLD99 RS21555
gene id: 1628086:DLD99_RS21555
uniprot id: A0A345RUI1
names: Similarity
messages: Belongs to the aspartokinase family.

1628086:DLD99 RS08830
gene id: 1628086:DLD99_RS08830
uniprot id: A0A345RMQ7
names: Similarity
messages: Belongs to the citrate synthase family.

1628086:DLD99 RS04705
gene id: 1628086:DLD99_RS04705
uniprot id: A0A345RKH7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the KdsC family.
messages: Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate.
messages: Homotetramer.

1628086:DLD99 RS27240
gene id: 1628086:DLD99_RS27240
uniprot id: A0A345RXK0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial CoaD family.
messages: Cytoplasm
messages: Homohexamer.
messages: Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.

1628086:DLD99 RS22020
gene id: 1628086:DLD99_RS22020
uniprot id: A0A345RUR9
names: Similarity
messages: Belongs to the KHG/KDPG aldolase family.

1628086:DLD99 RS18025
gene id: 1628086:DLD99_RS18025
uniprot id: A0A345RSM4
names: Function
names: Similarity
messages: Belongs to the complex I 51 kDa subunit family.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.

1628086:DLD99 RS02550
gene id: 1628086:DLD99_RS02550
uniprot id: A0A345RJC5
names: Function
names: Similarity
names: Subunit
messages: Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
messages: Belongs to the ZapA family. Type 1 subfamily.
messages: Homodimer. Interacts with FtsZ.

1628086:DLD99 RS08850
gene id: 1628086:DLD99_RS08850
uniprot id: A0A345RYQ0
names: Similarity
messages: Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.

1628086:DLD99 RS20095
gene id: 1628086:DLD99_RS20095
uniprot id: A0A345RTR1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the elongation factor P family.
messages: Cytoplasm
messages: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS06760
gene id: 1628086:DLD99_RS06760
uniprot id: A0A345RLL6
names: Subcellular Location Annotation
messages: Cytoplasm

1628086:DLD99 RS11265
gene id: 1628086:DLD99_RS11265
uniprot id: A0A345RP10
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
messages: Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
messages: The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD).

1628086:DLD99 RS19270
gene id: 1628086:DLD99_RS19270
uniprot id: A0A345RTB1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.
messages: Membrane

1628086:DLD99 RS25500
gene id: 1628086:DLD99_RS25500
uniprot id: A0A345RWM1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the XseB family.
messages: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
messages: Cytoplasm
messages: Heterooligomer composed of large and small subunits.

1628086:DLD99 RS25365
gene id: 1628086:DLD99_RS25365
uniprot id: A0A345RWJ6
names: Subcellular Location Annotation
messages: Membrane

1628086:DLD99 RS08555
gene id: 1628086:DLD99_RS08555
uniprot id: A0A345RMK5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sigma-70 factor family. FliA subfamily.
messages: Cytoplasm
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes.

1628086:DLD99 RS08080
gene id: 1628086:DLD99_RS08080
uniprot id: A0A345RMB3
names: Subcellular Location Annotation
messages: Cell inner membrane

1628086:DLD99 RS01920
gene id: 1628086:DLD99_RS01920
uniprot id: A0A345RJ04
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the imidazoleglycerol-phosphate dehydratase family.
messages: Cytoplasm

1628086:DLD99 RS19395
gene id: 1628086:DLD99_RS19395
uniprot id: A0A345RTD4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal stress protein A family.
messages: Cytoplasm

1628086:DLD99 RS26355
gene id: 1628086:DLD99_RS26355
uniprot id: A0A345RX25
names: Similarity
messages: Belongs to the UPF0057 (PMP3) family.

1628086:DLD99 RS10310
gene id: 1628086:DLD99_RS10310
uniprot id: A0A345RNI2
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the aspartate-semialdehyde dehydrogenase family.
messages: Catalyzes the NADPH-dependent formation of L-aspartate-semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl-4-phosphate.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS25820
gene id: 1628086:DLD99_RS25820
uniprot id: A0A345RWT2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS8 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.

1628086:DLD99 RS08485
gene id: 1628086:DLD99_RS08485
uniprot id: A0A345RMJ3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FliL family.
messages: Cell inner membrane
messages: Controls the rotational direction of flagella during chemotaxis.
messages: Membrane

1628086:DLD99 RS28110
gene id: 1628086:DLD99_RS28110
uniprot id: A0A345RY18
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL33 family.

1628086:DLD99 RS09310
gene id: 1628086:DLD99_RS09310
uniprot id: A0A345RMZ3
names: Function
names: Similarity
names: Subunit
messages: ATPase required for the correct placement of the division site. Cell division inhibitors MinC and MinD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings.
messages: Belongs to the ParA family. MinD subfamily.
messages: Interacts with MinC and FtsZ.

1628086:DLD99 RS28930
gene id: 1628086:DLD99_RS28930
uniprot id: A0A345RYH5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase epsilon chain family.
messages: Cell membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Membrane
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

1628086:DLD99 RS01260
gene id: 1628086:DLD99_RS01260
uniprot id: A0A345RIP1
names: Similarity
messages: Belongs to the HicA mRNA interferase family.

1628086:DLD99 RS09985
gene id: 1628086:DLD99_RS09985
uniprot id: A0A345RNC3
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the heme-copper respiratory oxidase family.
messages: Binds 1 copper ion per subunit, denoted as copper B.
messages: Binds 2 heme groups per subunit, denoted as high- and low-spin.
messages: Membrane

1628086:DLD99 RS25950
gene id: 1628086:DLD99_RS25950
uniprot id: A0A345RWV8
names: Function
names: Similarity
messages: Belongs to the NusG family.
messages: Participates in transcription elongation, termination and antitermination.

1628086:DLD99 RS18005
gene id: 1628086:DLD99_RS18005
uniprot id: A0A345RSM0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 3 family.
messages: Cell membrane
messages: NDH-1 is composed of 13 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1628086:DLD99 RS13140
gene id: 1628086:DLD99_RS13140
uniprot id: A0A345RQ09
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

1628086:DLD99 RS06985
gene id: 1628086:DLD99_RS06985
uniprot id: A0A345RLQ8
names: Similarity
messages: Belongs to the ABC transporter superfamily.

1628086:DLD99 RS19375
gene id: 1628086:DLD99_RS19375
uniprot id: A0A345RTD1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thiolase-like superfamily. Thiolase family.
messages: Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
messages: Cytoplasm
messages: Heterotetramer of two alpha chains (FadB) and two beta chains (FadA).

1628086:DLD99 RS25790
gene id: 1628086:DLD99_RS25790
uniprot id: A0A345RWS6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecY/SEC61-alpha family.
messages: Cell membrane
messages: Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.
messages: Membrane
messages: The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.

1628086:DLD99 RS09305
gene id: 1628086:DLD99_RS09305
uniprot id: A0A345RMZ2
names: Function
names: Similarity
messages: Belongs to the MinE family.
messages: Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.

1628086:DLD99 RS24355
gene id: 1628086:DLD99_RS24355
uniprot id: A0A345RW07
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the ketol-acid reductoisomerase family.
messages: Binds 2 magnesium ions per subunit.
messages: Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS24150
gene id: 1628086:DLD99_RS24150
uniprot id: A0A345RVX4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PTH family.
messages: Cytoplasm
messages: Monomer.
messages: The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis.

1628086:DLD99 RS25965
gene id: 1628086:DLD99_RS25965
uniprot id: A0A345RWU8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: Cytoplasm
messages: Monomer.
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.

1628086:DLD99 RS06660
gene id: 1628086:DLD99_RS06660
uniprot id: A0A345RLJ9
names: Similarity
messages: Belongs to the ferredoxin--NADP reductase type 1 family.

1628086:DLD99 RS00995
gene id: 1628086:DLD99_RS00995
uniprot id: A0A345RII8
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Membrane
messages: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane.
messages: The complex is composed of two ATP-binding proteins (CysA), two transmembrane proteins (CysT and CysW) and a solute-binding protein (CysP).

1628086:DLD99 RS25885
gene id: 1628086:DLD99_RS25885
uniprot id: A0A345RWU5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL4 family.
messages: Forms part of the polypeptide exit tunnel.
messages: One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
messages: Part of the 50S ribosomal subunit.

1628086:DLD99 RS25835
gene id: 1628086:DLD99_RS25835
uniprot id: A0A345RWT5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL24 family.
messages: One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
messages: One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
messages: Part of the 50S ribosomal subunit.

1628086:DLD99 RS08635
gene id: 1628086:DLD99_RS08635
uniprot id: A0A345RMM1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CcmD/CycX/HelD family.
messages: Cell inner membrane
messages: Membrane
messages: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes.

1628086:DLD99 RS26445
gene id: 1628086:DLD99_RS26445
uniprot id: A0A345RX43
names: Subcellular Location Annotation
messages: Cytoplasm

1628086:DLD99 RS02235
gene id: 1628086:DLD99_RS02235
uniprot id: A0A345RJ65
names: Caution
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2).

1628086:DLD99 RS08650
gene id: 1628086:DLD99_RS08650
uniprot id: A0A345RMM4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family. DsbE subfamily.
messages: Cell inner membrane

1628086:DLD99 RS17520
gene id: 1628086:DLD99_RS17520
uniprot id: A0A345RSC8
names: Similarity
messages: Belongs to the FKBP-type PPIase family.

1628086:DLD99 RS25930
gene id: 1628086:DLD99_RS25930
uniprot id: A0A345RWV4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL12 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.
messages: Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.

1628086:DLD99 RS22200
gene id: 1628086:DLD99_RS22200
uniprot id: A0A345RUV4
names: Subcellular Location Annotation
messages: Cytoplasm

1628086:DLD99 RS21620
gene id: 1628086:DLD99_RS21620
uniprot id: A0A345RUJ4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Membrane

1628086:DLD99 RS26270
gene id: 1628086:DLD99_RS26270
uniprot id: A0A345RX10
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the KAE1 / TsaD family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction.

1628086:DLD99 RS25830
gene id: 1628086:DLD99_RS25830
uniprot id: A0A345RWT4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL5 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.
messages: This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.

1628086:DLD99 RS02350
gene id: 1628086:DLD99_RS02350
uniprot id: A0A345RJ87
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the shikimate kinase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.
messages: Cytoplasm
messages: Monomer.

1628086:DLD99 RS23600
gene id: 1628086:DLD99_RS23600
uniprot id: A0A345RVM2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c oxidase subunit 2 family.
messages: Cell membrane
messages: Membrane

1628086:DLD99 RS09005
gene id: 1628086:DLD99_RS09005
uniprot id: A0A345RMU0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Cob(I)alamin adenosyltransferase family.
messages: Cytoplasm
messages: Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.

1628086:DLD99 RS00050
gene id: 1628086:DLD99_RS00050
uniprot id: A0A345RYJ4
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Tetramer of two alpha and two beta subunits.

1628086:DLD99 RS22505
gene id: 1628086:DLD99_RS22505
uniprot id: A0A345RV11
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class-I fumarase family.
messages: Catalyzes the reversible hydration of fumarate to (S)-malate.
messages: Homodimer.

1628086:DLD99 RS20855
gene id: 1628086:DLD99_RS20855
uniprot id: A0A345RU61
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase RluA family.
messages: Responsible for synthesis of pseudouridine from uracil.

1628086:DLD99 RS01940
gene id: 1628086:DLD99_RS01940
uniprot id: A0A345RJ08
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HisA/HisF family.
messages: Cytoplasm
messages: Heterodimer of HisH and HisF.
messages: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.

1628086:DLD99 RS20510
gene id: 1628086:DLD99_RS20510
uniprot id: A0A345RTZ3
names: Similarity
messages: Belongs to the BolA/IbaG family.

1628086:DLD99 RS18485
gene id: 1628086:DLD99_RS18485
uniprot id: A0A345RSW3
names: Similarity
names: Subunit
messages: Belongs to the bacterial histone-like protein family.
messages: Heterodimer of an alpha and a beta chain.

1628086:DLD99 RS26335
gene id: 1628086:DLD99_RS26335
uniprot id: A0A345RX21
names: Function
names: Similarity
messages: Belongs to the PqqC family.
messages: Ring cyclization and eight-electron oxidation of 3a-(2-amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9-dicarboxylic-acid to PQQ.

1628086:DLD99 RS08335
gene id: 1628086:DLD99_RS08335
uniprot id: A0A345RMG4
names: Function
names: Similarity
messages: Belongs to the rhamnosyl O-methyltransferase family.
messages: Catalyzes the O-methylation of the hydroxyl group located on C-2 of the first rhamnosyl residue linked to the phenolic group of glycosylated phenolphthiocerol dimycocerosates (PGL) and p-hydroxybenzoic acid derivatives (p-HBAD).

1628086:DLD99 RS28030
gene id: 1628086:DLD99_RS28030
uniprot id: A0A345RY02
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family. Xpt subfamily.
messages: Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
messages: Cytoplasm
messages: Homodimer.

1628086:DLD99 RS24760
gene id: 1628086:DLD99_RS24760
uniprot id: A0A345RW82
names: Similarity
messages: Belongs to the YjdM family.

1628086:DLD99 RS20420
gene id: 1628086:DLD99_RS20420
uniprot id: A0A345RTX5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytidylate kinase family. Type 1 subfamily.
messages: Cytoplasm

1628086:DLD99 RS23770
gene id: 1628086:DLD99_RS23770
uniprot id: A0A345RVQ3
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MraZ family.
messages: Forms oligomers.
messages: nucleoid

1628086:DLD99 RS18050
gene id: 1628086:DLD99_RS18050
uniprot id: A0A345RSM9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 4L family.
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 13 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1628086:DLD99 RS25760
gene id: 1628086:DLD99_RS25760
uniprot id: A0A345RWS0
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL17 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L32.

1628086:DLD99 RS02990
gene id: 1628086:DLD99_RS02990
uniprot id: A0A345RJK9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS18 family.
messages: Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6.

1628086:DLD99 RS23385
gene id: 1628086:DLD99_RS23385
uniprot id: A0A345RVI1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NDK family.
messages: Cytoplasm
messages: Homotetramer.
messages: Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.

1628086:DLD99 RS03265
gene id: 1628086:DLD99_RS03265
uniprot id: A0A345RJQ9
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the urease gamma subunit family.
messages: Cytoplasm
messages: Heterotrimer of UreA (gamma), UreB (beta) and UreC (alpha) subunits. Three heterotrimers associate to form the active enzyme.

1628086:DLD99 RS18745
gene id: 1628086:DLD99_RS18745
uniprot id: A0A345RT09
names: Similarity
names: Subunit
messages: Belongs to the ALAD family.
messages: Homooctamer.

1628086:DLD99 RS03145
gene id: 1628086:DLD99_RS03145
uniprot id: A0A345RJN7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SIMIBI class G3E GTPase family. UreG subfamily.
messages: Cytoplasm
messages: Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
messages: Homodimer. UreD, UreF and UreG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of UreC. The UreE protein probably delivers the nickel.

1628086:DLD99 RS20035
gene id: 1628086:DLD99_RS20035
uniprot id: A0A345RTQ1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEAD box helicase family. DeaD/CsdA subfamily.
messages: Cytoplasm
messages: DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.

1628086:DLD99 RS04775
gene id: 1628086:DLD99_RS04775
uniprot id: A0A345RKJ1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PAPS reductase family. CysD subfamily.
messages: Heterodimer composed of CysD, the smaller subunit, and CysN.
messages: With CysN forms the ATP sulfurylase (ATPS) that catalyzes the adenylation of sulfate producing adenosine 5'-phosphosulfate (APS) and diphosphate, the first enzymatic step in sulfur assimilation pathway. APS synthesis involves the formation of a high-energy phosphoric-sulfuric acid anhydride bond driven by GTP hydrolysis by CysN coupled to ATP hydrolysis by CysD.

1628086:DLD99 RS02285
gene id: 1628086:DLD99_RS02285
uniprot id: A0A345RJ75
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.
messages: Allosterically activated by HslU binding.
messages: Belongs to the peptidase T1B family. HslV subfamily.
messages: Cytoplasm
messages: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.

1628086:DLD99 RS02920
gene id: 1628086:DLD99_RS02920
uniprot id: A0A345RJJ7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Hfq family.
messages: Homohexamer.
messages: RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs.

1628086:DLD99 RS20805
gene id: 1628086:DLD99_RS20805
uniprot id: A0A345RU51
names: Function
names: Similarity
messages: Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
messages: Involved in the type II fatty acid elongation cycle. Catalyzes the elongation of a wide range of acyl-ACP by the addition of two carbons from malonyl-ACP to an acyl acceptor. Can efficiently catalyze the conversion of palmitoleoyl-ACP (cis-hexadec-9-enoyl-ACP) to cis-vaccenoyl-ACP (cis-octadec-11-enoyl-ACP), an essential step in the thermal regulation of fatty acid composition.

1628086:DLD99 RS04695
gene id: 1628086:DLD99_RS04695
uniprot id: A0A345RKH5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LptA family.
messages: Component of the lipopolysaccharide transport and assembly complex.
messages: Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.
messages: Periplasm

1628086:DLD99 RS03190
gene id: 1628086:DLD99_RS03190
uniprot id: A0A345RJP6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.
messages: Cell membrane
messages: Membrane

1628086:DLD99 RS26850
gene id: 1628086:DLD99_RS26850
uniprot id: A0A345RXC3
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AdoMet synthase family.
messages: Binds 1 potassium ion per subunit.
messages: Binds 2 divalent ions per subunit.
messages: Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
messages: Cytoplasm
messages: Homotetramer; dimer of dimers.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS25530
gene id: 1628086:DLD99_RS25530
uniprot id: A0A345RWM7
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the GTP cyclohydrolase II family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.

1628086:DLD99 RS25840
gene id: 1628086:DLD99_RS25840
uniprot id: A0A345RWT6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.

1628086:DLD99 RS08220
gene id: 1628086:DLD99_RS08220
uniprot id: A0A345RME1
names: Similarity
messages: Belongs to the prokaryotic/mitochondrial release factor family.

1628086:DLD99 RS26045
gene id: 1628086:DLD99_RS26045
uniprot id: A0A345RWW7
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the HesB/IscA family.
messages: Binds 1 iron-sulfur cluster per subunit.
messages: Homodimer.
messages: Required for insertion of 4Fe-4S clusters for at least IspG.

1628086:DLD99 RS27740
gene id: 1628086:DLD99_RS27740
uniprot id: A0A345RXU7
names: Similarity
messages: Belongs to the thioredoxin family.

1628086:DLD99 RS04750
gene id: 1628086:DLD99_RS04750
uniprot id: A0A345RKI6
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATP phosphoribosyltransferase family. Short subfamily.
messages: Catalyzes the condensation of ATP and 5-phosphoribose 1-diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.
messages: Cytoplasm
messages: Heteromultimer composed of HisG and HisZ subunits.
messages: Lacks the C-terminal regulatory region which is replaced by HisZ.

1628086:DLD99 RS25560
gene id: 1628086:DLD99_RS25560
uniprot id: A0A345RWN3
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DHBP synthase family.
messages: Binds 2 divalent metal cations per subunit. Magnesium or manganese.
messages: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
messages: Homodimer.
messages: In the C-terminal section; belongs to the GTP cyclohydrolase II family.
messages: In the N-terminal section; belongs to the DHBP synthase family.

1628086:DLD99 RS17940
gene id: 1628086:DLD99_RS17940
uniprot id: A0A345RSK8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ClpS family.
messages: Binds to the N-terminal domain of the chaperone ClpA.
messages: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation.

1628086:DLD99 RS28480
gene id: 1628086:DLD99_RS28480
uniprot id: A0A345RY88
names: Subcellular Location Annotation
messages: Membrane

1628086:DLD99 RS21305
gene id: 1628086:DLD99_RS21305
uniprot id: A0A345RUE4
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.

1628086:DLD99 RS05285
gene id: 1628086:DLD99_RS05285
uniprot id: A0A345RKT8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YejK family.
messages: nucleoid

1628086:DLD99 RS02220
gene id: 1628086:DLD99_RS02220
uniprot id: A0A345RJ62
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PRA-CH family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
messages: Cytoplasm
messages: Homodimer.

1628086:DLD99 RS25540
gene id: 1628086:DLD99_RS25540
uniprot id: A0A345RWM9
names: Function
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).

1628086:DLD99 RS26275
gene id: 1628086:DLD99_RS26275
uniprot id: A0A345RX11
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS21 family.

1628086:DLD99 RS27140
gene id: 1628086:DLD99_RS27140
uniprot id: A0A345RXI0
names: Caution
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
messages: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1628086:DLD99 RS00085
gene id: 1628086:DLD99_RS00085
uniprot id: A0A345RI17
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the polypeptide deformylase family.
messages: Binds 1 Fe(2+) ion.
messages: Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.

1628086:DLD99 RS03955
gene id: 1628086:DLD99_RS03955
uniprot id: A0A345RK37
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1628086:DLD99 RS28145
gene id: 1628086:DLD99_RS28145
uniprot id: A0A345RY25
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acetylglutamate kinase family. ArgB subfamily.
messages: Catalyzes the ATP-dependent phosphorylation of N-acetyl-L-glutamate.
messages: Cytoplasm

1628086:DLD99 RS21550
gene id: 1628086:DLD99_RS21550
uniprot id: A0A345RUI0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).
messages: Belongs to the CsrA/RsmA family.
messages: Cytoplasm
messages: Homodimer; the beta-strands of each monomer intercalate to form a hydrophobic core, while the alpha-helices form wings that extend away from the core.

1628086:DLD99 RS26325
gene id: 1628086:DLD99_RS26325
uniprot id: A0A345RZ15
names: Function
names: Similarity
messages: Belongs to the PqqA family.
messages: Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis. PQQ is probably formed by cross-linking a specific glutamate to a specific tyrosine residue and excising these residues from the peptide.

1628086:DLD99 RS25275
gene id: 1628086:DLD99_RS25275
uniprot id: A0A345RWH9
names: Similarity
messages: Belongs to the UPF0250 family.