1232575:AFERRID RS12330
gene id: 1232575:AFERRID_RS12330
uniprot id: A0A2Z6IN09
names: Similarity
messages: Belongs to the bacterial microcompartments protein family.

1232575:AFERRID RS14200
gene id: 1232575:AFERRID_RS14200
uniprot id: A0A2Z6INW2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Hfq family.
messages: Homohexamer.
messages: RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs.

1232575:AFERRID RS05260
gene id: 1232575:AFERRID_RS05260
uniprot id: A0A2Z6IJN7
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL17 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L32.

1232575:AFERRID RS07975
gene id: 1232575:AFERRID_RS07975
uniprot id: A0A2Z6IJ02
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase epsilon chain family.
messages: Cell membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Membrane
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

1232575:AFERRID RS07650
gene id: 1232575:AFERRID_RS07650
uniprot id: A0A2Z6IIN7
names: Similarity
messages: Belongs to the FBPase class 2 family.

1232575:AFERRID RS14315
gene id: 1232575:AFERRID_RS14315
uniprot id: A0A2Z6ILS5
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS.
messages: Belongs to the acyl carrier protein (ACP) family.
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis.
messages: Cytoplasm

1232575:AFERRID RS05425
gene id: 1232575:AFERRID_RS05425
uniprot id: A0A2Z6ILG5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.
messages: With S4 and S5 plays an important role in translational accuracy.

1232575:AFERRID RS08830
gene id: 1232575:AFERRID_RS08830
uniprot id: A0A2Z6IJ37
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GroES chaperonin family.
messages: Cytoplasm
messages: Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.
messages: Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.

1232575:AFERRID RS06935
gene id: 1232575:AFERRID_RS06935
uniprot id: A0A2Z6II99
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL34 family.

1232575:AFERRID RS05810
gene id: 1232575:AFERRID_RS05810
uniprot id: A0A2Z6IGU5
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNase T family.
messages: Binds two Mg(2+) per subunit. The active form of the enzyme binds two Mg(2+) ions in its active site. The first Mg(2+) forms only one salt bridge with the protein.
messages: Homodimer.
messages: Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.

1232575:AFERRID RS05370
gene id: 1232575:AFERRID_RS05370
uniprot id: A0A2Z6IJR0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS3 family.
messages: Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.
messages: Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.

1232575:AFERRID RS00065
gene id: 1232575:AFERRID_RS00065
uniprot id: A0A2Z6IG77
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
messages: Membrane

1232575:AFERRID RS14785
gene id: 1232575:AFERRID_RS14785
uniprot id: A0A2Z6IP49
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the XseB family.
messages: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
messages: Cytoplasm
messages: Heterooligomer composed of large and small subunits.

1232575:AFERRID RS05405
gene id: 1232575:AFERRID_RS05405
uniprot id: A0A2Z6IGN9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS10 family.
messages: Involved in the binding of tRNA to the ribosomes.
messages: Part of the 30S ribosomal subunit.

1232575:AFERRID RS05455
gene id: 1232575:AFERRID_RS05455
uniprot id: A0A2Z6IGP7
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL11 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
messages: One or more lysine residues are methylated.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

1232575:AFERRID RS05075
gene id: 1232575:AFERRID_RS05075
uniprot id: A0A2Z6IM15
names: Similarity
messages: Belongs to the universal ribosomal protein uS9 family.

1232575:AFERRID RS12335
gene id: 1232575:AFERRID_RS12335
uniprot id: A0A2Z6INL6
names: Similarity
messages: Belongs to the bacterial microcompartments protein family.

1232575:AFERRID RS07945
gene id: 1232575:AFERRID_RS07945
uniprot id: A0A2Z6II52
uniprot id: P41173
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase C chain family.
messages: Cell inner membrane
messages: Cell membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.
messages: Membrane

1232575:AFERRID RS12220
gene id: 1232575:AFERRID_RS12220
uniprot id: A0A2Z6IK54
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the inorganic carbon transporter (TC 9.A.2) DabB family.
messages: Cell membrane
messages: Forms a complex with DabA.
messages: Membrane
messages: Part of an energy-coupled inorganic carbon pump.

1232575:AFERRID RS09460
gene id: 1232575:AFERRID_RS09460
uniprot id: A0A2Z6IJ03
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds the 23S rRNA.
messages: Part of the 50S ribosomal subunit.

1232575:AFERRID RS02840
gene id: 1232575:AFERRID_RS02840
uniprot id: A0A2Z6II95
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial histone-like protein family.
messages: Heterodimer of an alpha and a beta chain.
messages: This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control.

1232575:AFERRID RS09085
gene id: 1232575:AFERRID_RS09085
uniprot id: A0A2Z6ILY6
names: Subcellular Location Annotation
messages: Cytoplasm

1232575:AFERRID RS02905
gene id: 1232575:AFERRID_RS02905
uniprot id: A0A2Z6IGD5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 23 kDa subunit family.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: Cell membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1232575:AFERRID RS03525
gene id: 1232575:AFERRID_RS03525
uniprot id: A0A2Z6IGK3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Homodimer. Forms a membrane-associated complex with FtsX.
messages: Part of the ABC transporter FtsEX involved in cellular division. Important for assembly or stability of the septal ring.

1232575:AFERRID RS00470
gene id: 1232575:AFERRID_RS00470
uniprot id: A0A2Z6IGG2
names: Subcellular Location Annotation
messages: Membrane

1232575:AFERRID RS11300
gene id: 1232575:AFERRID_RS11300
uniprot id: A0A2Z6IKQ2
names: Similarity
messages: Belongs to the universal ribosomal protein uS2 family.

1232575:AFERRID RS08595
gene id: 1232575:AFERRID_RS08595
uniprot id: A0A2Z6IJB0
names: Similarity
messages: Belongs to the UPF0434 family.

1232575:AFERRID RS05360
gene id: 1232575:AFERRID_RS05360
uniprot id: A0A2Z6IH25
names: Similarity
messages: Belongs to the universal ribosomal protein uL29 family.

1232575:AFERRID RS08495
gene id: 1232575:AFERRID_RS08495
uniprot id: A0A2Z6IMP1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SurE nucleotidase family.
messages: Binds 1 divalent metal cation per subunit.
messages: Cytoplasm
messages: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.

1232575:AFERRID RS12280
gene id: 1232575:AFERRID_RS12280
uniprot id: A0A2Z6INU5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SUA5 family.
messages: Cytoplasm
messages: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.

1232575:AFERRID RS00395
gene id: 1232575:AFERRID_RS00395
uniprot id: A0A2Z6IE88
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 6 family.
messages: Cell membrane
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1232575:AFERRID RS05445
gene id: 1232575:AFERRID_RS05445
uniprot id: A0A2Z6IHG7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL10 family.
messages: Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

1232575:AFERRID RS05380
gene id: 1232575:AFERRID_RS05380
uniprot id: A0A2Z6IHJ9
names: Function
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.

1232575:AFERRID RS02855
gene id: 1232575:AFERRID_RS02855
uniprot id: A0A2Z6IFE3
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.

1232575:AFERRID RS07765
gene id: 1232575:AFERRID_RS07765
uniprot id: A0A2Z6III1
names: Similarity
messages: Belongs to the GST superfamily.

1232575:AFERRID RS14290
gene id: 1232575:AFERRID_RS14290
uniprot id: A0A2Z6INJ9
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL32 family.

1232575:AFERRID RS00405
gene id: 1232575:AFERRID_RS00405
uniprot id: A0A2Z6IE89
names: Subcellular Location Annotation
messages: Membrane

1232575:AFERRID RS00120
gene id: 1232575:AFERRID_RS00120
uniprot id: A0A2Z6IIF7
names: Subcellular Location Annotation
messages: Membrane

1232575:AFERRID RS05275
gene id: 1232575:AFERRID_RS05275
uniprot id: A0A2Z6IJI4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS11 family.
messages: Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
messages: Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.

1232575:AFERRID RS10655
gene id: 1232575:AFERRID_RS10655
uniprot id: A0A2Z6IKI1
names: Similarity
messages: Belongs to the bacterial histone-like protein family.

1232575:AFERRID RS00400
gene id: 1232575:AFERRID_RS00400
uniprot id: A0A2Z6IEY4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 4L family.
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1232575:AFERRID RS14950
gene id: 1232575:AFERRID_RS14950
uniprot id: A0A2Z6IP05
names: Similarity
messages: Belongs to the UPF0145 family.

1232575:AFERRID RS03155
gene id: 1232575:AFERRID_RS03155
uniprot id: A0A2Z6IKU6
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL28 family.

1232575:AFERRID RS10740
gene id: 1232575:AFERRID_RS10740
uniprot id: A0A2Z6IJB1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecA family.
messages: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.
messages: Cytoplasm

1232575:AFERRID RS10480
gene id: 1232575:AFERRID_RS10480
uniprot id: A0A2Z6IKB6
names: Caution
names: Similarity
messages: Belongs to the globin family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1232575:AFERRID RS10615
gene id: 1232575:AFERRID_RS10615
uniprot id: A0A2Z6IJM9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial histone-like protein family.
messages: Heterodimer of an alpha and a beta chain.
messages: This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control.

1232575:AFERRID RS12735
gene id: 1232575:AFERRID_RS12735
uniprot id: A0A2Z6IMY5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BI1 family.
messages: Membrane

1232575:AFERRID RS12320
gene id: 1232575:AFERRID_RS12320
uniprot id: A0A2Z6IL53
names: Similarity
messages: Belongs to the bacterioferritin family.

1232575:AFERRID RS12360
gene id: 1232575:AFERRID_RS12360
uniprot id: A0A2Z6IK87
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the RuBisCO small chain family.
messages: Heterohexadecamer of 8 large and 8 small subunits.
messages: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. Although the small subunit is not catalytic it is essential for maximal activity.
messages: The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.

1232575:AFERRID RS00095
gene id: 1232575:AFERRID_RS00095
uniprot id: A0A2Z6IE44
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
messages: Cell membrane

1232575:AFERRID RS05420
gene id: 1232575:AFERRID_RS05420
uniprot id: A0A2Z6IJS3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS7 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
messages: Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.

1232575:AFERRID RS03450
gene id: 1232575:AFERRID_RS03450
uniprot id: A0A2Z6IFR3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family.
messages: Cytoplasm
messages: Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.

1232575:AFERRID RS12270
gene id: 1232575:AFERRID_RS12270
uniprot id: A0A2Z6IK63
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class II DHOase subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
messages: Homodimer.

1232575:AFERRID RS00355
gene id: 1232575:AFERRID_RS00355
uniprot id: A0A2Z6IE79
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 3 family.
messages: Cell membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1232575:AFERRID RS14680
gene id: 1232575:AFERRID_RS14680
uniprot id: A0A2Z6IMA4
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Fur family.
messages: Cytoplasm
messages: Homodimer.

1232575:AFERRID RS05450
gene id: 1232575:AFERRID_RS05450
uniprot id: A0A2Z6IGP8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL1 family.
messages: Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
messages: Part of the 50S ribosomal subunit.
messages: Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.

1232575:AFERRID RS02860
gene id: 1232575:AFERRID_RS02860
uniprot id: A0A2Z6IFE9
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL35 family.

1232575:AFERRID RS14410
gene id: 1232575:AFERRID_RS14410
uniprot id: A0A2Z6ILV9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NDK family.
messages: Cytoplasm
messages: Homotetramer.
messages: Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.

1232575:AFERRID RS01550
gene id: 1232575:AFERRID_RS01550
uniprot id: A0A2Z6IER0
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS20 family.
messages: Binds directly to 16S ribosomal RNA.

1232575:AFERRID RS05270
gene id: 1232575:AFERRID_RS05270
uniprot id: A0A2Z6IHH5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS4 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S5 and S12 plays an important role in translational accuracy.

1232575:AFERRID RS12325
gene id: 1232575:AFERRID_RS12325
uniprot id: A0A2Z6INU7
names: Similarity
messages: Belongs to the bacterial microcompartments protein family.

1232575:AFERRID RS12160
gene id: 1232575:AFERRID_RS12160
uniprot id: A0A2Z6IKL8
names: Similarity
messages: Belongs to the small heat shock protein (HSP20) family.

1232575:AFERRID RS12285
gene id: 1232575:AFERRID_RS12285
uniprot id: A0A2Z6INL4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the dethiobiotin synthetase family.
messages: Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA, also called 7,8-diammoniononanoate) to form a ureido ring.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1232575:AFERRID RS00370
gene id: 1232575:AFERRID_RS00370
uniprot id: A0A2Z6IJB5
names: Cofactor
names: Similarity
messages: Belongs to the complex I 24 kDa subunit family.
messages: Binds 1 [2Fe-2S] cluster.

1232575:AFERRID RS03995
gene id: 1232575:AFERRID_RS03995
uniprot id: A0A2Z6IIV9
names: Similarity
messages: Belongs to the UPF0057 (PMP3) family.

1232575:AFERRID RS00415
gene id: 1232575:AFERRID_RS00415
uniprot id: A0A2Z6IE83
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 2 family.
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1232575:AFERRID RS05290
gene id: 1232575:AFERRID_RS05290
uniprot id: A0A2Z6IHD9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

1232575:AFERRID RS00390
gene id: 1232575:AFERRID_RS00390
uniprot id: A0A2Z6IH30
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 23 kDa subunit family.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: Cell membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1232575:AFERRID RS05440
gene id: 1232575:AFERRID_RS05440
uniprot id: A0A2Z6IGP2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL12 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.
messages: Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.

1232575:AFERRID RS09885
gene id: 1232575:AFERRID_RS09885
uniprot id: A0A2Z6IN34
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
messages: Membrane

1232575:AFERRID RS03895
gene id: 1232575:AFERRID_RS03895
uniprot id: A0A2Z6IIT9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS18 family.
messages: Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6.

1232575:AFERRID RS00360
gene id: 1232575:AFERRID_RS00360
uniprot id: A0A2Z6IE77
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 20 kDa subunit family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Cell membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1232575:AFERRID RS00410
gene id: 1232575:AFERRID_RS00410
uniprot id: A0A2Z6IE82
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 4 family.
messages: Membrane

1232575:AFERRID RS04035
gene id: 1232575:AFERRID_RS04035
uniprot id: A0A2Z6IKM4
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL19 family.
messages: This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.

1232575:AFERRID RS05350
gene id: 1232575:AFERRID_RS05350
uniprot id: A0A2Z6IGN2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.

1232575:AFERRID RS09925
gene id: 1232575:AFERRID_RS09925
uniprot id: A0A2Z6INF9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase epsilon chain family.
messages: Cell membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Membrane
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

1232575:AFERRID RS01310
gene id: 1232575:AFERRID_RS01310
uniprot id: A0A2Z6IJW0
names: Similarity
messages: Belongs to the SecB family.

1232575:AFERRID RS12365
gene id: 1232575:AFERRID_RS12365
uniprot id: A0A2Z6IL60
names: Caution
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the RuBisCO large chain family. Type I subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Heterohexadecamer of 8 large chains and 8 small chains.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.
messages: The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.

1232575:AFERRID RS13570
gene id: 1232575:AFERRID_RS13570
uniprot id: A0A2Z6IP09
names: Caution
names: Cofactor
names: Similarity
messages: Belongs to the WrbA family.
messages: Binds 1 FMN per monomer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1232575:AFERRID RS00380
gene id: 1232575:AFERRID_RS00380
uniprot id: A0A2Z6IIL3
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the complex I 75 kDa subunit family.
messages: Binds 1 [2Fe-2S] cluster per subunit.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1232575:AFERRID RS00385
gene id: 1232575:AFERRID_RS00385
uniprot id: A0A2Z6IEX6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 1 family.
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.

1232575:AFERRID RS05330
gene id: 1232575:AFERRID_RS05330
uniprot id: A0A2Z6IJJ3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS8 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.