Ochotona princeps isolate UAM:Mamm:113957 chromosome 13A, OchPri4.0, whole genome shotgun sequence.
type: Entry
definition: Ochotona princeps isolate UAM:Mamm:113957 chromosome 13A, OchPri4.0, whole genome shotgun sequence.
sequence version: NC_050567.1
sequence date: 2020-10-09
sequence: sequence
division: CON
label: NC_050567.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA666703
dblink: SAMN15664588
keyword: WGS
keyword: RefSeq
source: Ochotona princeps (American pika)
organism: Ochotona princeps
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM025744.1.\nAssembly name: OchPri4.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of British\nColumbia Okanagan on 2020/09/21. The original whole-genome shotgun\nproject has the accession JACJUE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of British Columbia\n Okanagan\nAssembly Method :: Dovetail HiRise v. 2017\nAssembly Name :: OchPri4.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: GCA_000292845.1\nGenome Coverage :: 23.68x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Ochotona princeps Annotation Release\n 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 14987928
topology: linear
so has quality: SO_0000987
location: 1..14987928
location: region:1-14987928:1
RO_0002162: 9978

NC_050567
type: RefSeq
SIO_000068: refseq

PRJNA666703
type: BioProject
SIO_000068: bioproject

SAMN15664588
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14987928:1
position: 14987928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-14987928:1:source
so part of: sequence
organism: Ochotona princeps
mol type: genomic DNA
isolate: UAM:Mamm:113957
chromosome: 13A
sex: male
tissue type: liver
dev stage: adult
country: USA: Beaverhead-Deerlodge National Forest, Montana
lat lon: 45.34309 N 113.67609 W
collection date: 2010-06-19

9978
type: Taxonomy
SIO_000068: taxonomy

LOC101534752
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101534752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 27603..56312
location: region:27603-56312:1
so has part: feature:27603-56312:1:exon

101534752
type: Gene
SIO_000068: ncbigene

position:27603:1
position: 27603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56312:1
position: 56312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27603-56312:1:exon

LOC101534752
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101534752
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
pseudo: true
SIO_010081: LOC101534752
subclass of: SO_0000673
so part of: LOC101534752
location: 27603..27669
location: region:27603-27669:1
so has part: feature:27603-27669:1:exon

position:27669:1
position: 27669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27603-27669:1:exon

LOC101534752
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101534752
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
pseudo: true
SIO_010081: LOC101534752
subclass of: SO_0000673
so part of: LOC101534752
location: 33801..34030
location: region:33801-34030:1
so has part: feature:33801-34030:1:exon

position:33801:1
position: 33801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34030:1
position: 34030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33801-34030:1:exon

LOC101534752
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101534752
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
pseudo: true
SIO_010081: LOC101534752
subclass of: SO_0000673
so part of: LOC101534752
location: 39402..39544
location: region:39402-39544:1
so has part: feature:39402-39544:1:exon

position:39402:1
position: 39402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39544:1
position: 39544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39402-39544:1:exon

LOC101534752
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101534752
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
pseudo: true
SIO_010081: LOC101534752
subclass of: SO_0000673
so part of: LOC101534752
location: 40713..40728
location: region:40713-40728:1
so has part: feature:40713-40728:1:exon

position:40713:1
position: 40713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40728:1
position: 40728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40713-40728:1:exon

LOC101534752
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101534752
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
pseudo: true
SIO_010081: LOC101534752
subclass of: SO_0000673
so part of: LOC101534752
location: 43130..43246
location: region:43130-43246:1
so has part: feature:43130-43246:1:exon

position:43130:1
position: 43130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43246:1
position: 43246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43130-43246:1:exon

LOC101534752
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101534752
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
pseudo: true
SIO_010081: LOC101534752
subclass of: SO_0000673
so part of: LOC101534752
location: 44396..44433
location: region:44396-44433:1
so has part: feature:44396-44433:1:exon

position:44396:1
position: 44396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44433:1
position: 44433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44396-44433:1:exon

LOC101534752
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101534752
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
pseudo: true
SIO_010081: LOC101534752
subclass of: SO_0000673
so part of: LOC101534752
location: 55150..56312
location: region:55150-56312:1
so has part: feature:55150-56312:1:exon

position:55150:1
position: 55150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55150-56312:1:exon

LOC101532334
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101532334
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 748759..749502
location: region:748759-749502:1
so has part: feature:748759-749502:1:exon

101532334
type: Gene
SIO_000068: ncbigene

position:748759:1
position: 748759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749502:1
position: 749502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748759-749502:1:exon

LOC101532334
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101532334
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC101532334
subclass of: SO_0000673
so part of: LOC101532334
location: 748759..749502
location: region:748759-749502:1
so has part: feature:748759-749502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:748759-749502:1:exon

PAIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PAIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1360333..1361705)
location: region:1360333-1361705:-1
so has part: feature:1360333-1361705:-1:exon
subclass of: SO_0000010

101532572
type: Gene
SIO_000068: ncbigene

position:1360333:-1
position: 1360333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361705:-1
position: 1361705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1360333-1361705:-1:exon

PAIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PAIP1
product: poly(A) binding protein interacting protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930439.2
SIO_010081: PAIP1
subclass of: SO_0000673
so part of: PAIP1
location: complement(1360333..1361705)
location: region:1360333-1361705:-1
so has part: feature:1360333-1361705:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1360333-1361705:-1:exon

PAIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PAIP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: polyadenylate-binding protein-interacting protein 1
translation: MAKPQVVVVPVLMSKLSANAPEFYPSGYSNYTESYEDGCEEYPTLSEYVQDFLNHLTQQPGNFETEIEQFAETLNGWVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHHLTISPQSGSFRQLLLQRCRTEYEVNDQAAKGDEVTRKRFHAFVLFLGELFLNLEIKGTNGQVMRADILEVGLRELLNALFSNPMDDNLIWAVKLLKLTGSVLEDAWKEKAKTDMEEIIQRIENVVLDANCSRDVKLPELVELRSSSWGRVHATSAYREATPENDRNYFMSEPTTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAGDPYLDDIDDEMDPEIEEAYEKFGLESERKQKQ
SIO_010081: PAIP1
subclass of: SO_0000673
so part of: PAIP1
location: complement(1360592..1361690)
location: region:1360592-1361690:-1
so has part: feature:1360592-1361690:-1:exon

XP_012785893.1
type: Protein
SIO_000068: ncbiprotein

position:1360592:-1
position: 1360592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361690:-1
position: 1361690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1360592-1361690:-1:exon

DPP6
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: DPP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1442952..2286349
location: region:1442952-2286349:1
so has part: feature:1442952-2286349:1:exon
subclass of: SO_0000010

101532816
type: Gene
SIO_000068: ncbigene

position:1442952:1
position: 1442952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2286349:1
position: 2286349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1442952-2286349:1:exon

DPP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: DPP6
product: dipeptidyl peptidase like 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597514.3
SIO_010081: DPP6
subclass of: SO_0000673
so part of: DPP6
location: join(1442952..1443182,1832148..1832262,1865966..1866064,1926496..1926590,1927872..1927896,1948269..1948303,1985102..1985112,1988657..1988660,2033431..2033483,2062603..2062684,2121720..2121840,2159221..2159449,2188804..2188827,2190058..2190181,2191735..2191773,2198378..2198485,2200126..2200217,2201118..2201165,2203299..2203417,2248518..2248565,2266437..2266535,2269848..2269917,2272973..2273167,2277638..2277692,2279577..2279688,2282696..2282754,2283529..2283601,2283700..2283773,2286133..2286349)
location: region:1442952-2286349:1
so has part: feature:1442952-1443182:1:exon
so has part: feature:1832148-1832262:1:exon
so has part: feature:1865966-1866064:1:exon
so has part: feature:1926496-1926590:1:exon
so has part: feature:1927872-1927896:1:exon
so has part: feature:1948269-1948303:1:exon
so has part: feature:1985102-1985112:1:exon
so has part: feature:1988657-1988660:1:exon
so has part: feature:2033431-2033483:1:exon
so has part: feature:2062603-2062684:1:exon
so has part: feature:2121720-2121840:1:exon
so has part: feature:2159221-2159449:1:exon
so has part: feature:2188804-2188827:1:exon
so has part: feature:2190058-2190181:1:exon
so has part: feature:2191735-2191773:1:exon
so has part: feature:2198378-2198485:1:exon
so has part: feature:2200126-2200217:1:exon
so has part: feature:2201118-2201165:1:exon
so has part: feature:2203299-2203417:1:exon
so has part: feature:2248518-2248565:1:exon
so has part: feature:2266437-2266535:1:exon
so has part: feature:2269848-2269917:1:exon
so has part: feature:2272973-2273167:1:exon
so has part: feature:2277638-2277692:1:exon
so has part: feature:2279577-2279688:1:exon
so has part: feature:2282696-2282754:1:exon
so has part: feature:2283529-2283601:1:exon
so has part: feature:2283700-2283773:1:exon
so has part: feature:2286133-2286349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1442952-1443182:1:exon

position:1443182:1
position: 1443182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1832148-1832262:1:exon

position:1832148:1
position: 1832148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1832262:1
position: 1832262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1865966-1866064:1:exon

position:1865966:1
position: 1865966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1866064:1
position: 1866064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1926496-1926590:1:exon

position:1926496:1
position: 1926496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1926590:1
position: 1926590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1927872-1927896:1:exon

position:1927872:1
position: 1927872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1927896:1
position: 1927896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1948269-1948303:1:exon

position:1948269:1
position: 1948269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1948303:1
position: 1948303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1985102-1985112:1:exon

position:1985102:1
position: 1985102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1985112:1
position: 1985112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1988657-1988660:1:exon

position:1988657:1
position: 1988657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1988660:1
position: 1988660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2033431-2033483:1:exon

position:2033431:1
position: 2033431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2033483:1
position: 2033483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2062603-2062684:1:exon

position:2062603:1
position: 2062603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2062684:1
position: 2062684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2121720-2121840:1:exon

position:2121720:1
position: 2121720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2121840:1
position: 2121840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2159221-2159449:1:exon

position:2159221:1
position: 2159221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2159449:1
position: 2159449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2188804-2188827:1:exon

position:2188804:1
position: 2188804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2188827:1
position: 2188827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2190058-2190181:1:exon

position:2190058:1
position: 2190058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2190181:1
position: 2190181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2191735-2191773:1:exon

position:2191735:1
position: 2191735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2191773:1
position: 2191773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2198378-2198485:1:exon

position:2198378:1
position: 2198378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2198485:1
position: 2198485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2200126-2200217:1:exon

position:2200126:1
position: 2200126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2200217:1
position: 2200217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2201118-2201165:1:exon

position:2201118:1
position: 2201118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2201165:1
position: 2201165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2203299-2203417:1:exon

position:2203299:1
position: 2203299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2203417:1
position: 2203417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2248518-2248565:1:exon

position:2248518:1
position: 2248518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2248565:1
position: 2248565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2266437-2266535:1:exon

position:2266437:1
position: 2266437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2266535:1
position: 2266535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2269848-2269917:1:exon

position:2269848:1
position: 2269848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2269917:1
position: 2269917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2272973-2273167:1:exon

position:2272973:1
position: 2272973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2273167:1
position: 2273167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2277638-2277692:1:exon

position:2277638:1
position: 2277638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2277692:1
position: 2277692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2279577-2279688:1:exon

position:2279577:1
position: 2279577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2279688:1
position: 2279688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2282696-2282754:1:exon

position:2282696:1
position: 2282696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2282754:1
position: 2282754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2283529-2283601:1:exon

position:2283529:1
position: 2283529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2283601:1
position: 2283601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2283700-2283773:1:exon

position:2283700:1
position: 2283700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2283773:1
position: 2283773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2286133-2286349:1:exon

position:2286133:1
position: 2286133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: DPP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dipeptidyl aminopeptidase-like protein 6
translation: MASLYQRFTGKINTSRSFPAPPEASHLLGGQGPEEDGGAAAKPPGPQAQAASRERGGGAAGRPRFQYQARSDGDEEDELVGSNPPQRNWKGIAIALLVILVICSLIVTSVILLTPAEDNSLSQKKKVTVEDLFSEDFKIHDPEAKWISDKEFIYREKKGNVILQNVETNISTVLIEAKKIEKIRRVRVKLSADRSWTPFSYSVEPIYQHSYTGYYVLSKLPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYATINDSRVPLMELPTYTGSVYPTVKPYHYPKVGGKKPQSRCFQLFMLAPPHTQLTQPPSNPSEQEYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFVRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILSYDEKRNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLLENCTYFSASFSHSSDFFLLKCEGPGVPTVTVHNTTDKKKIFDLETNEHVQKAISDRQMPIIEYRKIEIDDYSLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVVEKFEVTWETVMVSSHGALVVKCDGRGSGFQGTKLLHEVRRRLGSLEEKDQMEAVRTMLKEQYVDKTRVAVFGKDYGGYLSTYILPAKSENQGQTFTCGSAVSPITDFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEGQQFLLIHATADEKIHFQHTAELITQLIKAKANYSLQIYPDESHYFHSTFLKQHLYRSIINFFVECFRIQDKLPTVTTKEDEEED
SIO_010081: DPP6
subclass of: SO_0000673
so part of: DPP6
location: join(1442952..1443182,1832148..1832262,1865966..1866064,1926496..1926590,1927872..1927896,1948269..1948303,1985102..1985112,1988657..1988660,2033431..2033483,2062603..2062684,2121720..2121840,2159221..2159449,2188804..2188827,2190058..2190181,2191735..2191773,2198378..2198485,2200126..2200217,2201118..2201165,2203299..2203417,2248518..2248565,2266437..2266535,2269848..2269917,2272973..2273167,2277638..2277692,2279577..2279688,2282696..2282754,2283529..2283601,2283700..2283773,2286133..2286279)
location: region:1442952-2286279:1
so has part: feature:1442952-1443182:1:exon
so has part: feature:1832148-1832262:1:exon
so has part: feature:1865966-1866064:1:exon
so has part: feature:1926496-1926590:1:exon
so has part: feature:1927872-1927896:1:exon
so has part: feature:1948269-1948303:1:exon
so has part: feature:1985102-1985112:1:exon
so has part: feature:1988657-1988660:1:exon
so has part: feature:2033431-2033483:1:exon
so has part: feature:2062603-2062684:1:exon
so has part: feature:2121720-2121840:1:exon
so has part: feature:2159221-2159449:1:exon
so has part: feature:2188804-2188827:1:exon
so has part: feature:2190058-2190181:1:exon
so has part: feature:2191735-2191773:1:exon
so has part: feature:2198378-2198485:1:exon
so has part: feature:2200126-2200217:1:exon
so has part: feature:2201118-2201165:1:exon
so has part: feature:2203299-2203417:1:exon
so has part: feature:2248518-2248565:1:exon
so has part: feature:2266437-2266535:1:exon
so has part: feature:2269848-2269917:1:exon
so has part: feature:2272973-2273167:1:exon
so has part: feature:2277638-2277692:1:exon
so has part: feature:2279577-2279688:1:exon
so has part: feature:2282696-2282754:1:exon
so has part: feature:2283529-2283601:1:exon
so has part: feature:2283700-2283773:1:exon
so has part: feature:2286133-2286279:1:exon

XP_004597571.1
type: Protein
SIO_000068: ncbiprotein

position:2286279:1
position: 2286279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1442952-1443182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1832148-1832262:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1865966-1866064:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1926496-1926590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1927872-1927896:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1948269-1948303:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1985102-1985112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1988657-1988660:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2033431-2033483:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2062603-2062684:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2121720-2121840:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2159221-2159449:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2188804-2188827:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2190058-2190181:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2191735-2191773:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2198378-2198485:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2200126-2200217:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2201118-2201165:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2203299-2203417:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2248518-2248565:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2266437-2266535:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2269848-2269917:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2272973-2273167:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2277638-2277692:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2279577-2279688:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2282696-2282754:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2283529-2283601:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2283700-2283773:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2286133-2286279:1:exon

PAXIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PAXIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2341390..2403091)
location: region:2341390-2403091:-1
so has part: feature:2341390-2403091:-1:exon
subclass of: SO_0000010

101534996
type: Gene
SIO_000068: ncbigene

position:2341390:-1
position: 2341390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2403091:-1
position: 2403091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2341390-2403091:-1:exon

PAXIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PAXIP1
product: PAX interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597522.1
SIO_010081: PAXIP1
subclass of: SO_0000673
so part of: PAXIP1
location: complement(join(2341390..2341463,2341552..2341627,2342582..2342716,2344049..2344149,2347734..2347902,2349396..2349498,2351049..2351119,2367509..2367552,2368911..2369095,2369856..2369977,2370623..2370760,2372235..2372330,2381780..2381830,2383894..2384526,2389208..2389321,2396270..2396333,2398768..2398811,2401630..2401764,2403014..2403091))
location: region:2341390-2403091:-1
so has part: feature:2403014-2403091:-1:exon
so has part: feature:2401630-2401764:-1:exon
so has part: feature:2398768-2398811:-1:exon
so has part: feature:2396270-2396333:-1:exon
so has part: feature:2389208-2389321:-1:exon
so has part: feature:2383894-2384526:-1:exon
so has part: feature:2381780-2381830:-1:exon
so has part: feature:2372235-2372330:-1:exon
so has part: feature:2370623-2370760:-1:exon
so has part: feature:2369856-2369977:-1:exon
so has part: feature:2368911-2369095:-1:exon
so has part: feature:2367509-2367552:-1:exon
so has part: feature:2351049-2351119:-1:exon
so has part: feature:2349396-2349498:-1:exon
so has part: feature:2347734-2347902:-1:exon
so has part: feature:2344049-2344149:-1:exon
so has part: feature:2342582-2342716:-1:exon
so has part: feature:2341552-2341627:-1:exon
so has part: feature:2341390-2341463:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2403014-2403091:-1:exon

position:2403014:-1
position: 2403014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2401630-2401764:-1:exon

position:2401630:-1
position: 2401630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2401764:-1
position: 2401764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2398768-2398811:-1:exon

position:2398768:-1
position: 2398768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2398811:-1
position: 2398811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2396270-2396333:-1:exon

position:2396270:-1
position: 2396270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2396333:-1
position: 2396333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2389208-2389321:-1:exon

position:2389208:-1
position: 2389208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2389321:-1
position: 2389321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2383894-2384526:-1:exon

position:2383894:-1
position: 2383894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2384526:-1
position: 2384526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2381780-2381830:-1:exon

position:2381780:-1
position: 2381780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2381830:-1
position: 2381830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2372235-2372330:-1:exon

position:2372235:-1
position: 2372235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2372330:-1
position: 2372330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2370623-2370760:-1:exon

position:2370623:-1
position: 2370623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2370760:-1
position: 2370760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2369856-2369977:-1:exon

position:2369856:-1
position: 2369856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2369977:-1
position: 2369977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2368911-2369095:-1:exon

position:2368911:-1
position: 2368911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2369095:-1
position: 2369095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2367509-2367552:-1:exon

position:2367509:-1
position: 2367509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2367552:-1
position: 2367552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2351049-2351119:-1:exon

position:2351049:-1
position: 2351049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2351119:-1
position: 2351119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2349396-2349498:-1:exon

position:2349396:-1
position: 2349396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2349498:-1
position: 2349498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2347734-2347902:-1:exon

position:2347734:-1
position: 2347734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2347902:-1
position: 2347902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2344049-2344149:-1:exon

position:2344049:-1
position: 2344049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2344149:-1
position: 2344149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2342582-2342716:-1:exon

position:2342582:-1
position: 2342582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2342716:-1
position: 2342716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2341552-2341627:-1:exon

position:2341552:-1
position: 2341552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2341627:-1
position: 2341627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2341390-2341463:-1:exon

position:2341463:-1
position: 2341463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAXIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PAXIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAX-interacting protein 1
translation: MAEDGAAVLESLLPCWVMAVSGAESHVIQLLKAGKAKEVSYNALASHIISEDGDNPEVGEAREVFDLPVVKPSWVVLSVQCGALLPVNGFSPESCQIFFGITACLSQVSSEDRSALWALLTFYGGDCQLNLNKKCTHLIVPEPKGEKYEYALKRTSIKIVTPDWVLDCISEKTKKDEASYHPRLIIYEEEEEEEEEEEVENEEQESPNEGSTDEKSSPASSQEGSPSREQPFSPKSNTEKSKGELMFDDSSDSSPEKQERNLNWTPAEVPQLAVAKRRLPQGKEPGLINLCANVPPAPGNIVPPDVRGNLMASGQNLPSSERSQMLATWNPAVRTLRNITNNADIQQLNRPSNVAHNNHSEFQENDSVESRNKIIQAHGGAVDPTFTSRCTHLLCESQVSSMYAQAIRERKRCVTAHWLNTVLKKKKMVPPHRALHFPVAFPPGGKPCSQHIISVTGFVDNDRDDLKLMAYLAGAKYTGYLCRSNTVLICKEPTGLKYEKAKEWRIPCVNAQWLGDILLGNFEALRQIQYSRYTAFNLQDPFAPTQQLVLSLLDAWRVPLKVSPEVLMGVRLPPTLKQKEVTNIQPSSKRARIEDIPPPTKKLTPELTPLVLFTGFEPVQVQQYIKKLYILGGEVVESAQTCTHLIASKVTRTVKFLTAISVVRHIVTPEWLEECFKCQKFIDEQNYILRDAEAEVLFSFSLEESLKRAHVSPLFKAKYFYITPGICPSLSTMKAIVECAGGKVLPKQPSFRKLMEHKQNKSLSEIILISCENDLHLCREYFARGIDVHNAEFILTGVLTQTLDYESYPF
SIO_010081: PAXIP1
subclass of: SO_0000673
so part of: PAXIP1
location: complement(join(2341390..2341463,2341552..2341627,2342582..2342716,2344049..2344149,2347734..2347902,2349396..2349498,2351049..2351119,2367509..2367552,2368911..2369095,2369856..2369977,2370623..2370760,2372235..2372330,2381780..2381830,2383894..2384526,2389208..2389321,2396270..2396333,2398768..2398811,2401630..2401764,2403014..2403091))
location: region:2341390-2403091:-1
so has part: feature:2403014-2403091:-1:exon
so has part: feature:2401630-2401764:-1:exon
so has part: feature:2398768-2398811:-1:exon
so has part: feature:2396270-2396333:-1:exon
so has part: feature:2389208-2389321:-1:exon
so has part: feature:2383894-2384526:-1:exon
so has part: feature:2381780-2381830:-1:exon
so has part: feature:2372235-2372330:-1:exon
so has part: feature:2370623-2370760:-1:exon
so has part: feature:2369856-2369977:-1:exon
so has part: feature:2368911-2369095:-1:exon
so has part: feature:2367509-2367552:-1:exon
so has part: feature:2351049-2351119:-1:exon
so has part: feature:2349396-2349498:-1:exon
so has part: feature:2347734-2347902:-1:exon
so has part: feature:2344049-2344149:-1:exon
so has part: feature:2342582-2342716:-1:exon
so has part: feature:2341552-2341627:-1:exon
so has part: feature:2341390-2341463:-1:exon

XP_004597579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2403014-2403091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2401630-2401764:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2398768-2398811:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2396270-2396333:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2389208-2389321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2383894-2384526:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2381780-2381830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2372235-2372330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2370623-2370760:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2369856-2369977:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2368911-2369095:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2367509-2367552:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2351049-2351119:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2349396-2349498:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2347734-2347902:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2344049-2344149:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2342582-2342716:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2341552-2341627:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2341390-2341463:-1:exon

HTR5A
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: HTR5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2469460..2481888
location: region:2469460-2481888:1
so has part: feature:2469460-2481888:1:exon
subclass of: SO_0000010

101533055
type: Gene
SIO_000068: ncbigene

position:2469460:1
position: 2469460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2481888:1
position: 2481888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2469460-2481888:1:exon

HTR5A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: HTR5A
product: 5-hydroxytryptamine receptor 5A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 Proteins
transcript id: XM_004597515.1
SIO_010081: HTR5A
subclass of: SO_0000673
so part of: HTR5A
location: join(2469460..2470252,2481555..2481888)
location: region:2469460-2481888:1
so has part: feature:2469460-2470252:1:exon
so has part: feature:2481555-2481888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2469460-2470252:1:exon

position:2470252:1
position: 2470252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2481555-2481888:1:exon

position:2481555:1
position: 2481555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HTR5A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: HTR5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 5A
translation: MDLPVNLTSCSHVTSSPLETNRSLGTEDLRPSPHLVSVFGVLVLTFLGFLVAATFAWNLLVLATIFRVRTFHRVPHNLVASMAISDVLVAALVMPLSLVHELSGRRWQLGRRLCQLWIACDVLCCTASIWNVTAIALDRYWSITRHLEYTLRARKRISNMMIALTWALSAVISLAPLLFGWGETYSEGSEECQVSREPSYTVFSTVGAFYLPLCVVLFVYWKIYKAAKFRVGSRKINSVSPVSEAVEVKDSAQQPQMAFTVRHATVTFQTEGDTWREQKDQRAALMVGILIGVFVLCWIPFFITELISPLCSCDIPAIWKSLFLWLGYSNSFFNPLIYTAFNKNYSSAFKNFFSRQH
SIO_010081: HTR5A
subclass of: SO_0000673
so part of: HTR5A
location: join(2469512..2470252,2481555..2481887)
location: region:2469512-2481887:1
so has part: feature:2469512-2470252:1:exon
so has part: feature:2481555-2481887:1:exon

XP_004597572.1
type: Protein
SIO_000068: ncbiprotein

position:2469512:1
position: 2469512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2481887:1
position: 2481887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2469512-2470252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2481555-2481887:1:exon

INSIG1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: INSIG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2741549..2751752
location: region:2741549-2751752:1
so has part: feature:2741549-2751752:1:exon
subclass of: SO_0000010

101533294
type: Gene
SIO_000068: ncbigene

position:2741549:1
position: 2741549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2751752:1
position: 2751752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2741549-2751752:1:exon

INSIG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: INSIG1
product: insulin induced gene 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004597516.2
SIO_010081: INSIG1
subclass of: SO_0000673
so part of: INSIG1
location: join(2741549..2741942,2744773..2744897,2745902..2746068,2746421..2746520,2749791..2751752)
location: region:2741549-2751752:1
so has part: feature:2741549-2741942:1:exon
so has part: feature:2744773-2744897:1:exon
so has part: feature:2745902-2746068:1:exon
so has part: feature:2746421-2746520:1:exon
so has part: feature:2749791-2751752:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2741549-2741942:1:exon

position:2741942:1
position: 2741942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2744773-2744897:1:exon

position:2744773:1
position: 2744773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2744897:1
position: 2744897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2745902-2746068:1:exon

position:2745902:1
position: 2745902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2746068:1
position: 2746068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2746421-2746520:1:exon

position:2746421:1
position: 2746421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2746520:1
position: 2746520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2749791-2751752:1:exon

position:2749791:1
position: 2749791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INSIG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: INSIG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-induced gene 1 protein
translation: MPRLHDHLWGCSYPNSARHQSPPRARAAGLAAGTGDMSSSPGAGPSLLVAHGAPDTDRSAETSDHRGGGHPSSWHHHLVQRSVVLFLVGVVLALVLNLLQIQRNVTLFPEEVIATIFSSAWWVPPCCGTAAAVVGLLYPCIDSHLGEPHKFKREWASVMRCIAVFVGINHASAKLDFANNVQLSLTLAALSLGLWWTFDRSRSGLGLGITIAFLATLITQFLVYNGVYQYTSPDFLYIRSWLPCIFFSGGVTVGNIGRQLAMGVPEKPHSD
SIO_010081: INSIG1
subclass of: SO_0000673
so part of: INSIG1
location: join(2741549..2741942,2744773..2744897,2745902..2746068,2746421..2746520,2749791..2749820)
location: region:2741549-2749820:1
so has part: feature:2741549-2741942:1:exon
so has part: feature:2744773-2744897:1:exon
so has part: feature:2745902-2746068:1:exon
so has part: feature:2746421-2746520:1:exon
so has part: feature:2749791-2749820:1:exon

XP_004597573.1
type: Protein
SIO_000068: ncbiprotein

position:2749820:1
position: 2749820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2741549-2741942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2744773-2744897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745902-2746068:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2746421-2746520:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2749791-2749820:1:exon

EN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: EN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2879089..2883380
location: region:2879089-2883380:1
so has part: feature:2879089-2883380:1:exon
subclass of: SO_0000010

101533538
type: Gene
SIO_000068: ncbigene

position:2879089:1
position: 2879089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883380:1
position: 2883380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2879089-2883380:1:exon

EN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: EN2
product: engrailed homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins
transcript id: XM_004597517.1
SIO_010081: EN2
subclass of: SO_0000673
so part of: EN2
location: join(2879089..2880016,2883042..2883380)
location: region:2879089-2883380:1
so has part: feature:2879089-2880016:1:exon
so has part: feature:2883042-2883380:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2879089-2880016:1:exon

position:2880016:1
position: 2880016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2883042-2883380:1:exon

position:2883042:1
position: 2883042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: EN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein engrailed-2
translation: MEENDPKPSEAAAAAVEGQRQPESSPNGGSAGGGSPGDADTGRRRALMLPAVLQAPGNHQHPHRITNFFIDNILRPEFGRRKDAGTCCAVLGGRGSAAGSEGGASVAEGGGGAGGAEQLLGLGAREPRQNPPCAPGAGGPLPAGGGDSPADGEGGSKTLSLHGSAKKGGDPGGPLDGALQARGLGSGDLSVSSDSDSSQASANLGAQPMLWPAWVYCTRYSDRPSSGPRSRKPKKKNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKRAKIKKATGNKNTLAVHLMAQGLYNHSTTAKEGKSDSE
SIO_010081: EN2
subclass of: SO_0000673
so part of: EN2
location: join(2879338..2880016,2883042..2883358)
location: region:2879338-2883358:1
so has part: feature:2879338-2880016:1:exon
so has part: feature:2883042-2883358:1:exon

XP_004597574.1
type: Protein
SIO_000068: ncbiprotein

position:2879338:1
position: 2879338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883358:1
position: 2883358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2879338-2880016:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2883042-2883358:1:exon

CNPY1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CNPY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2924147..2961966)
location: region:2924147-2961966:-1
so has part: feature:2924147-2961966:-1:exon
subclass of: SO_0000010

101533781
type: Gene
SIO_000068: ncbigene

position:2924147:-1
position: 2924147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2961966:-1
position: 2961966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2924147-2961966:-1:exon

CNPY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CNPY1
product: canopy FGF signaling regulator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004597518.2
SIO_010081: CNPY1
subclass of: SO_0000673
so part of: CNPY1
location: complement(join(2924147..2924305,2928031..2928127,2929860..2930063,2961860..2961966))
location: region:2924147-2961966:-1
so has part: feature:2961860-2961966:-1:exon
so has part: feature:2929860-2930063:-1:exon
so has part: feature:2928031-2928127:-1:exon
so has part: feature:2924147-2924305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2961860-2961966:-1:exon

position:2961860:-1
position: 2961860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2929860-2930063:-1:exon

position:2929860:-1
position: 2929860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2930063:-1
position: 2930063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2928031-2928127:-1:exon

position:2928031:-1
position: 2928031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2928127:-1
position: 2928127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2924147-2924305:-1:exon

position:2924305:-1
position: 2924305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNPY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CNPY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein canopy homolog 1
translation: MDELEHDVTKARKKKAKVGSFRINPDGTQERRKIPLVQSEAFLVDLLDQVCERMNDYKLEEDPVTREKTFKRYAPRKGDKVYKDFKKFYFYSDAYRPLKFACETIIEEYEDEIFALIAQEAHSLADKLCGEKSGLCETSANDTEL
SIO_010081: CNPY1
subclass of: SO_0000673
so part of: CNPY1
location: complement(join(2924268..2924305,2928031..2928127,2929860..2930063,2961860..2961958))
location: region:2924268-2961958:-1
so has part: feature:2961860-2961958:-1:exon
so has part: feature:2929860-2930063:-1:exon
so has part: feature:2928031-2928127:-1:exon
so has part: feature:2924268-2924305:-1:exon

XP_004597575.2
type: Protein
SIO_000068: ncbiprotein

position:2924268:-1
position: 2924268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2961958:-1
position: 2961958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2961860-2961958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2929860-2930063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2928031-2928127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2924268-2924305:-1:exon

RBM33
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RBM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3060308..3191159
location: region:3060308-3191159:1
so has part: feature:3060308-3191159:1:exon
subclass of: SO_0000010

101535245
type: Gene
SIO_000068: ncbigene

position:3060308:1
position: 3060308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3191159:1
position: 3191159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3060308-3191159:1:exon

RBM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RBM33
product: RNA binding motif protein 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930438.1
SIO_010081: RBM33
subclass of: SO_0000673
so part of: RBM33
location: join(3060308..3060350,3082856..3082879,3088791..3088869,3098377..3098425,3100896..3100972,3104024..3104327,3107910..3108029,3125109..3125280,3132305..3132513,3135384..3135669,3140982..3141040,3160273..3160405,3160811..3161154,3162272..3162586,3164183..3164428,3168761..3169417,3182408..3182617,3185647..3185835,3190260..3190348,3190616..3191159)
location: region:3060308-3191159:1
so has part: feature:3060308-3060350:1:exon
so has part: feature:3082856-3082879:1:exon
so has part: feature:3088791-3088869:1:exon
so has part: feature:3098377-3098425:1:exon
so has part: feature:3100896-3100972:1:exon
so has part: feature:3104024-3104327:1:exon
so has part: feature:3107910-3108029:1:exon
so has part: feature:3125109-3125280:1:exon
so has part: feature:3132305-3132513:1:exon
so has part: feature:3135384-3135669:1:exon
so has part: feature:3140982-3141040:1:exon
so has part: feature:3160273-3160405:1:exon
so has part: feature:3160811-3161154:1:exon
so has part: feature:3162272-3162586:1:exon
so has part: feature:3164183-3164428:1:exon
so has part: feature:3168761-3169417:1:exon
so has part: feature:3182408-3182617:1:exon
so has part: feature:3185647-3185835:1:exon
so has part: feature:3190260-3190348:1:exon
so has part: feature:3190616-3191159:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3060308-3060350:1:exon

position:3060350:1
position: 3060350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3082856-3082879:1:exon

position:3082856:1
position: 3082856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3082879:1
position: 3082879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3088791-3088869:1:exon

position:3088791:1
position: 3088791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3088869:1
position: 3088869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3098377-3098425:1:exon

position:3098377:1
position: 3098377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3098425:1
position: 3098425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3100896-3100972:1:exon

position:3100896:1
position: 3100896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3100972:1
position: 3100972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3104024-3104327:1:exon

position:3104024:1
position: 3104024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3104327:1
position: 3104327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3107910-3108029:1:exon

position:3107910:1
position: 3107910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3108029:1
position: 3108029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3125109-3125280:1:exon

position:3125109:1
position: 3125109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3125280:1
position: 3125280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3132305-3132513:1:exon

position:3132305:1
position: 3132305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3132513:1
position: 3132513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3135384-3135669:1:exon

position:3135384:1
position: 3135384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3135669:1
position: 3135669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3140982-3141040:1:exon

position:3140982:1
position: 3140982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141040:1
position: 3141040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3160273-3160405:1:exon

position:3160273:1
position: 3160273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3160405:1
position: 3160405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3160811-3161154:1:exon

position:3160811:1
position: 3160811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3161154:1
position: 3161154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3162272-3162586:1:exon

position:3162272:1
position: 3162272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3162586:1
position: 3162586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3164183-3164428:1:exon

position:3164183:1
position: 3164183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3164428:1
position: 3164428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3168761-3169417:1:exon

position:3168761:1
position: 3168761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3169417:1
position: 3169417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3182408-3182617:1:exon

position:3182408:1
position: 3182408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3182617:1
position: 3182617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3185647-3185835:1:exon

position:3185647:1
position: 3185647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3185835:1
position: 3185835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3190260-3190348:1:exon

position:3190260:1
position: 3190260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3190348:1
position: 3190348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3190616-3191159:1:exon

position:3190616:1
position: 3190616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RBM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 33
translation: MAAALGAGGGAGAGGGGGAGSGNDDFDQFDKPGAERSWRRRAADEDWDSELEDDLLGEDLLSGKKNQSDLSDEELNDDLLQSDNEDEENFSSQGVKISLNATSGMVTSFDNTNDQSGEQESEYEQGEDELIYHKSDRTELYSQEYPDEGQYEGQEAELAEDQIEYVEEPEEEQLYNDEVLDIEINEPLDEFTDEEYLQAYGGQQGLPDQEDYVAEDDLDEITGSQVAPETEEGGMETLELQKDIKEESDEEDDDDEESGRLRFKTERKEGTIIRLSDVTRERRNIPETLELSAEAKAALLEFEERERQHKQGRYGSRRGARRGGSLMCRGMGDQRRDTSDRGRMKDHRPALLPTQPPVVTHSPRLIPPPQPQPPPPPPPPPPQQPIRSLFQQQQLQPLLPLQHPHHPSPPQGMHMPPQIETPRIMMTPPPVTPQQPKNIHINPHFKGTVVTPVQVPLLPVPSQPRPAVGPQRFPGPPEFPQHTPGPVPNTFSQPPRLPLQEQWRAPPPPQDRDPFFLGVSGEPRFPSHLFLEQRSPPPPPPPPTLLNSSHPVPTQSPLPFTQPAPAFNQQGQQPVFPRERPVRPALQPPGPVGILHFSQPGAATTRPFIPPRQPFLPGPGQPFLPTHAQPNLQGPLHPPLPPPHQPQPQPQQQQPQHQQQQPQHHQHQPPLQPPHQPPHQPPPQHQPQHQPQHHHHLSVPPPPLMPMAQAQFRPHVQTAQPQPNNSRMQCPQRQGLRHNATSQNVTKRPMQQMQPTAPRNSNLRELPIAPSHVIEASSRCSSTPAAQAKPSRSAPAKAEVKVKQVSPVTQPAEEAKTDPEFPDEDEETRLYRLKIEEQKRLREEILKQKELRRQQQAGARKKELLERLAQQQQQQQQQLYGPQPPAEAEEQTAATSPTNGNPLLPYPGAQCRPNVKNRLLGKSQDVTVSNVQPKTSSFGPSGANMQYQGQQTRPLKHVRQTRTVPPSPAQPLHKVLQVKPADVEEPPAASQTARVASVQSQPADTKPGVKRTVMQRANSGSGDGPHVSSKVRVIKLSGGQGGESDGFFHPEGQSQRLPQPPEVRQLPIRKVTLTIGGLQQPQHPPVGPHMHSAVPPGIKSIQGIHPAKKALMHGRGRGLAGPMGRGRLMPNKQNLRVVECKPQPCVVSVEGLSSSTTDAQLKSLLMSVGPIQSLQMLPQQRKAIAKFKEPAHALAFQQKFHRHMIDLSHINVALIVE
SIO_010081: RBM33
subclass of: SO_0000673
so part of: RBM33
location: join(3060308..3060350,3082856..3082879,3088791..3088869,3098377..3098425,3100896..3100972,3104024..3104327,3107910..3108029,3125109..3125280,3132305..3132513,3135384..3135669,3140982..3141040,3160273..3160405,3160811..3161154,3162272..3162586,3164183..3164428,3168761..3169417,3182408..3182617,3185647..3185835,3190260..3190348,3190616..3190664)
location: region:3060308-3190664:1
so has part: feature:3060308-3060350:1:exon
so has part: feature:3082856-3082879:1:exon
so has part: feature:3088791-3088869:1:exon
so has part: feature:3098377-3098425:1:exon
so has part: feature:3100896-3100972:1:exon
so has part: feature:3104024-3104327:1:exon
so has part: feature:3107910-3108029:1:exon
so has part: feature:3125109-3125280:1:exon
so has part: feature:3132305-3132513:1:exon
so has part: feature:3135384-3135669:1:exon
so has part: feature:3140982-3141040:1:exon
so has part: feature:3160273-3160405:1:exon
so has part: feature:3160811-3161154:1:exon
so has part: feature:3162272-3162586:1:exon
so has part: feature:3164183-3164428:1:exon
so has part: feature:3168761-3169417:1:exon
so has part: feature:3182408-3182617:1:exon
so has part: feature:3185647-3185835:1:exon
so has part: feature:3190260-3190348:1:exon
so has part: feature:3190616-3190664:1:exon

XP_012785892.1
type: Protein
SIO_000068: ncbiprotein

position:3190664:1
position: 3190664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3060308-3060350:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3082856-3082879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3088791-3088869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3098377-3098425:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3100896-3100972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104024-3104327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3107910-3108029:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3125109-3125280:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3132305-3132513:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3135384-3135669:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3140982-3141040:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3160273-3160405:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3160811-3161154:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3162272-3162586:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3164183-3164428:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3168761-3169417:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3182408-3182617:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3185647-3185835:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3190260-3190348:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3190616-3190664:1:exon

SHH
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SHH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3207011..3216324)
location: region:3207011-3216324:-1
so has part: feature:3207011-3216324:-1:exon
subclass of: SO_0000010

101534025
type: Gene
SIO_000068: ncbigene

position:3207011:-1
position: 3207011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3216324:-1
position: 3216324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3207011-3216324:-1:exon

SHH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SHH
product: sonic hedgehog signaling molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins
transcript id: XM_004597519.1
SIO_010081: SHH
subclass of: SO_0000673
so part of: SHH
location: complement(join(3207011..3207841,3210561..3210822,3215879..3216324))
location: region:3207011-3216324:-1
so has part: feature:3215879-3216324:-1:exon
so has part: feature:3210561-3210822:-1:exon
so has part: feature:3207011-3207841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3215879-3216324:-1:exon

position:3215879:-1
position: 3215879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3210561-3210822:-1:exon

position:3210561:-1
position: 3210561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3210822:-1
position: 3210822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3207011-3207841:-1:exon

position:3207841:-1
position: 3207841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SHH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SHH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sonic hedgehog protein
translation: MLLLARCLLVALLSSLLVGSALACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCSVKAENSVAAKSGGCFPGSASVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSDFLTFLDRDDSARKVFYVIETLEPRERLLLTAAHLLFVAPHNDSAAAGEPQVPSGGAPERRALFASRVRPGQRVYVMVERDGDRRLLPASVRSVTLHEEATGAYAPLTAQGTILINRVLASCYAVIEEHSWAHWAFAPFRLAHALLAALQPTRTDRLGDGDGGGGGLMPVPAPGAVDVPGATAPAGIHWYSQLLYQIGTWLLDSEALHPLGMAVTSS
SIO_010081: SHH
subclass of: SO_0000673
so part of: SHH
location: complement(join(3207042..3207841,3210561..3210822,3215879..3216178))
location: region:3207042-3216178:-1
so has part: feature:3215879-3216178:-1:exon
so has part: feature:3210561-3210822:-1:exon
so has part: feature:3207042-3207841:-1:exon

XP_004597576.1
type: Protein
SIO_000068: ncbiprotein

position:3207042:-1
position: 3207042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3216178:-1
position: 3216178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3215879-3216178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3210561-3210822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3207042-3207841:-1:exon

LOC105942459
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105942459
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3513365..3520699
location: region:3513365-3520699:1
so has part: feature:3513365-3520699:1:exon
subclass of: SO_0000011

105942459
type: Gene
SIO_000068: ncbigene

position:3513365:1
position: 3513365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3520699:1
position: 3520699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3513365-3520699:1:exon

LOC105942459
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: lncRNA
gene: LOC105942459
product: uncharacterized LOC105942459
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001168449.1
SIO_010081: LOC105942459
subclass of: SO_0000673
so part of: LOC105942459
location: join(3513365..3513483,3517111..3517165,3520506..3520699)
location: region:3513365-3520699:1
so has part: feature:3513365-3513483:1:exon
so has part: feature:3517111-3517165:1:exon
so has part: feature:3520506-3520699:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3513365-3513483:1:exon

position:3513483:1
position: 3513483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3517111-3517165:1:exon

position:3517111:1
position: 3517111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3517165:1
position: 3517165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3520506-3520699:1:exon

position:3520506:1
position: 3520506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101535500
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101535500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3613831..3621652)
location: region:3613831-3621652:-1
so has part: feature:3613831-3621652:-1:exon

101535500
type: Gene
SIO_000068: ncbigene

position:3613831:-1
position: 3613831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3621652:-1
position: 3621652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3613831-3621652:-1:exon

LOC101535500
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101535500
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC101535500
subclass of: SO_0000673
so part of: LOC101535500
location: complement(3613831..3614690)
location: region:3613831-3614690:-1
so has part: feature:3613831-3614690:-1:exon

position:3614690:-1
position: 3614690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3613831-3614690:-1:exon

LOC101535500
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101535500
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC101535500
subclass of: SO_0000673
so part of: LOC101535500
location: complement(3621595..3621652)
location: region:3621595-3621652:-1
so has part: feature:3621595-3621652:-1:exon

position:3621595:-1
position: 3621595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3621595-3621652:-1:exon

LOC101535730
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101535730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3697193..3724456
location: region:3697193-3724456:1
so has part: feature:3697193-3724456:1:exon

101535730
type: Gene
SIO_000068: ncbigene

position:3697193:1
position: 3697193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3724456:1
position: 3724456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3697193-3724456:1:exon

LOC101535730
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101535730
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
pseudo: true
SIO_010081: LOC101535730
subclass of: SO_0000673
so part of: LOC101535730
location: 3697193..3697275
location: region:3697193-3697275:1
so has part: feature:3697193-3697275:1:exon

position:3697275:1
position: 3697275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3697193-3697275:1:exon

LOC101535730
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101535730
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
pseudo: true
SIO_010081: LOC101535730
subclass of: SO_0000673
so part of: LOC101535730
location: 3723881..3724456
location: region:3723881-3724456:1
so has part: feature:3723881-3724456:1:exon

position:3723881:1
position: 3723881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3723881-3724456:1:exon

LOC118760392
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760392
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3887182..3887372)
location: region:3887182-3887372:-1
so has part: feature:3887182-3887372:-1:exon
subclass of: SO_0000623

118760392
type: Gene
SIO_000068: ncbigene

position:3887182:-1
position: 3887182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3887372:-1
position: 3887372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3887182-3887372:-1:exon

LOC118760392
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118760392
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996756.1
SIO_010081: LOC118760392
subclass of: SO_0000673
so part of: LOC118760392
location: complement(3887182..3887372)
location: region:3887182-3887372:-1
so has part: feature:3887182-3887372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3887182-3887372:-1:exon

RNF32
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RNF32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4040364..4080586
location: region:4040364-4080586:1
so has part: feature:4040364-4080586:1:exon
subclass of: SO_0000010

101535966
type: Gene
SIO_000068: ncbigene

position:4040364:1
position: 4040364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4080586:1
position: 4080586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4040364-4080586:1:exon

RNF32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RNF32
product: ring finger protein 32
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930440.1
SIO_010081: RNF32
subclass of: SO_0000673
so part of: RNF32
location: join(4040364..4040509,4042601..4042723,4042891..4042973,4043530..4043794,4049718..4049860,4057344..4057376,4057901..4058025,4058230..4058338,4078985..4079152,4080262..4080586)
location: region:4040364-4080586:1
so has part: feature:4040364-4040509:1:exon
so has part: feature:4042601-4042723:1:exon
so has part: feature:4042891-4042973:1:exon
so has part: feature:4043530-4043794:1:exon
so has part: feature:4049718-4049860:1:exon
so has part: feature:4057344-4057376:1:exon
so has part: feature:4057901-4058025:1:exon
so has part: feature:4058230-4058338:1:exon
so has part: feature:4078985-4079152:1:exon
so has part: feature:4080262-4080586:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4040364-4040509:1:exon

position:4040509:1
position: 4040509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4042601-4042723:1:exon

position:4042601:1
position: 4042601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4042723:1
position: 4042723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4042891-4042973:1:exon

position:4042891:1
position: 4042891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4042973:1
position: 4042973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4043530-4043794:1:exon

position:4043530:1
position: 4043530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4043794:1
position: 4043794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4049718-4049860:1:exon

position:4049718:1
position: 4049718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4049860:1
position: 4049860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4057344-4057376:1:exon

position:4057344:1
position: 4057344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4057376:1
position: 4057376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4057901-4058025:1:exon

position:4057901:1
position: 4057901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4058025:1
position: 4058025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4058230-4058338:1:exon

position:4058230:1
position: 4058230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4058338:1
position: 4058338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4078985-4079152:1:exon

position:4078985:1
position: 4078985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4079152:1
position: 4079152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4080262-4080586:1:exon

position:4080262:1
position: 4080262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RNF32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 32
translation: MFKKKSRSSKRDNLAVTAVALQDHILHDLQIQNLSIADYSKTKIQKKENKPKSLKKDTKATIDTGLKRSIQSPRMEDPEKEYVLDPKPPPLTLAQKLGLVEPPPLPLSSEEWDKVKQRSILQGDSVQPCPICKEEFELHPQVLLSCSHVFHRACLQAFEKFTNKKTCPLCRKNQYQTRVIHDGARLFKVKCATRVQAYWRGYIVRKWYRNLRKTVPPSDAKLRKKFFEEKFTEISHRILCSYSTNIEELFSEIDQCLAVNRSILQQLDEKCGQEITGEAWEKIQIQALGRESLECPICLSPLSLSGHRQPRRETVLLSCSHLFHHTCLLALEEFSLGDSFPLHVCPLCRSCYQKKILEC
SIO_010081: RNF32
subclass of: SO_0000673
so part of: RNF32
location: join(4042959..4042973,4043530..4043794,4049718..4049860,4057344..4057376,4057901..4058025,4058230..4058338,4078985..4079152,4080262..4080483)
location: region:4042959-4080483:1
so has part: feature:4042959-4042973:1:exon
so has part: feature:4043530-4043794:1:exon
so has part: feature:4049718-4049860:1:exon
so has part: feature:4057344-4057376:1:exon
so has part: feature:4057901-4058025:1:exon
so has part: feature:4058230-4058338:1:exon
so has part: feature:4078985-4079152:1:exon
so has part: feature:4080262-4080483:1:exon

XP_012785894.1
type: Protein
SIO_000068: ncbiprotein

position:4042959:1
position: 4042959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4080483:1
position: 4080483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4042959-4042973:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4043530-4043794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4049718-4049860:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4057344-4057376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4057901-4058025:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4058230-4058338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4078985-4079152:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4080262-4080483:1:exon

LMBR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LMBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4093012..4271131)
location: region:4093012-4271131:-1
so has part: feature:4093012-4271131:-1:exon
subclass of: SO_0000010

101534265
type: Gene
SIO_000068: ncbigene

position:4093012:-1
position: 4093012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4271131:-1
position: 4271131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4093012-4271131:-1:exon

LMBR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LMBR1
product: limb development membrane protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 7 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597520.2
SIO_010081: LMBR1
subclass of: SO_0000673
so part of: LMBR1
location: complement(join(4093012..4094421,4096393..4096554,4111666..4111732,4112902..4112992,4113226..4113299,4117036..4117113,4117858..4117934,4128686..4128766,4149609..4149681,4165575..4165639,4166120..4166188,4166630..4166756,4196420..4196523,4226333..4226472,4237125..4237164,4239811..4239883,4270910..4271131))
location: region:4093012-4271131:-1
so has part: feature:4270910-4271131:-1:exon
so has part: feature:4239811-4239883:-1:exon
so has part: feature:4237125-4237164:-1:exon
so has part: feature:4226333-4226472:-1:exon
so has part: feature:4196420-4196523:-1:exon
so has part: feature:4166630-4166756:-1:exon
so has part: feature:4166120-4166188:-1:exon
so has part: feature:4165575-4165639:-1:exon
so has part: feature:4149609-4149681:-1:exon
so has part: feature:4128686-4128766:-1:exon
so has part: feature:4117858-4117934:-1:exon
so has part: feature:4117036-4117113:-1:exon
so has part: feature:4113226-4113299:-1:exon
so has part: feature:4112902-4112992:-1:exon
so has part: feature:4111666-4111732:-1:exon
so has part: feature:4096393-4096554:-1:exon
so has part: feature:4093012-4094421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4270910-4271131:-1:exon

position:4270910:-1
position: 4270910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4239811-4239883:-1:exon

position:4239811:-1
position: 4239811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4239883:-1
position: 4239883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4237125-4237164:-1:exon

position:4237125:-1
position: 4237125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4237164:-1
position: 4237164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4226333-4226472:-1:exon

position:4226333:-1
position: 4226333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4226472:-1
position: 4226472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4196420-4196523:-1:exon

position:4196420:-1
position: 4196420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4196523:-1
position: 4196523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4166630-4166756:-1:exon

position:4166630:-1
position: 4166630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4166756:-1
position: 4166756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4166120-4166188:-1:exon

position:4166120:-1
position: 4166120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4166188:-1
position: 4166188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4165575-4165639:-1:exon

position:4165575:-1
position: 4165575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4165639:-1
position: 4165639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4149609-4149681:-1:exon

position:4149609:-1
position: 4149609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4149681:-1
position: 4149681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4128686-4128766:-1:exon

position:4128686:-1
position: 4128686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4128766:-1
position: 4128766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4117858-4117934:-1:exon

position:4117858:-1
position: 4117858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4117934:-1
position: 4117934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4117036-4117113:-1:exon

position:4117036:-1
position: 4117036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4117113:-1
position: 4117113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4113226-4113299:-1:exon

position:4113226:-1
position: 4113226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4113299:-1
position: 4113299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4112902-4112992:-1:exon

position:4112902:-1
position: 4112902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4112992:-1
position: 4112992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4111666-4111732:-1:exon

position:4111666:-1
position: 4111666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4111732:-1
position: 4111732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4096393-4096554:-1:exon

position:4096393:-1
position: 4096393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4096554:-1
position: 4096554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4093012-4094421:-1:exon

position:4094421:-1
position: 4094421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMBR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LMBR1
product: limb development membrane protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036497626.1
SIO_010081: LMBR1
subclass of: SO_0000673
so part of: LMBR1
location: complement(join(4094336..4094421,4111666..4111732,4112902..4112992,4113226..4113299,4117036..4117113,4117858..4117934,4128686..4128766,4149609..4149681,4165575..4165639,4166120..4166188,4166630..4166756,4196420..4196523,4226333..4226472,4237125..4237164,4239811..4239883,4270910..4271131))
location: region:4094336-4271131:-1
so has part: feature:4270910-4271131:-1:exon
so has part: feature:4239811-4239883:-1:exon
so has part: feature:4237125-4237164:-1:exon
so has part: feature:4226333-4226472:-1:exon
so has part: feature:4196420-4196523:-1:exon
so has part: feature:4166630-4166756:-1:exon
so has part: feature:4166120-4166188:-1:exon
so has part: feature:4165575-4165639:-1:exon
so has part: feature:4149609-4149681:-1:exon
so has part: feature:4128686-4128766:-1:exon
so has part: feature:4117858-4117934:-1:exon
so has part: feature:4117036-4117113:-1:exon
so has part: feature:4113226-4113299:-1:exon
so has part: feature:4112902-4112992:-1:exon
so has part: feature:4111666-4111732:-1:exon
so has part: feature:4094336-4094421:-1:exon

position:4094336:-1
position: 4094336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4270910-4271131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4239811-4239883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4237125-4237164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4226333-4226472:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4196420-4196523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4166630-4166756:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4166120-4166188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4165575-4165639:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4149609-4149681:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4128686-4128766:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4117858-4117934:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4117036-4117113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4113226-4113299:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4112902-4112992:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4111666-4111732:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4094336-4094421:-1:exon

LMBR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LMBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: limb region 1 protein homolog isoform X2
translation: MEGQDEVSAREQHFHSQVRESTICFLLFAILYVVSYFIITRYKRKSDEQEDEDAIVNRISLFLSTFTLAVSAGAVLLLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCLFVLMPFAFFFLESEGFAGLKKGIRARILETLVMLVLLALLILGIVWVALALIDNDAASMESLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYIITLEEEALQRRLNGLSSSVEYNVLALEQELENVKMLKAKLERRKKASAWERNLVYPAVMVLLLIETSISVLLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMVSSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGLHKLHLSNTSRDSEATKPSANGHQKAL
SIO_010081: LMBR1
subclass of: SO_0000673
so part of: LMBR1
location: complement(join(4094336..4094421,4111666..4111732,4112902..4112992,4113226..4113299,4117036..4117113,4117858..4117934,4128686..4128766,4149609..4149681,4165575..4165639,4166120..4166188,4166630..4166756,4196420..4196523,4226333..4226472,4237125..4237164,4239811..4239883,4270910..4270975))
location: region:4094336-4270975:-1
so has part: feature:4270910-4270975:-1:exon
so has part: feature:4239811-4239883:-1:exon
so has part: feature:4237125-4237164:-1:exon
so has part: feature:4226333-4226472:-1:exon
so has part: feature:4196420-4196523:-1:exon
so has part: feature:4166630-4166756:-1:exon
so has part: feature:4166120-4166188:-1:exon
so has part: feature:4165575-4165639:-1:exon
so has part: feature:4149609-4149681:-1:exon
so has part: feature:4128686-4128766:-1:exon
so has part: feature:4117858-4117934:-1:exon
so has part: feature:4117036-4117113:-1:exon
so has part: feature:4113226-4113299:-1:exon
so has part: feature:4112902-4112992:-1:exon
so has part: feature:4111666-4111732:-1:exon
so has part: feature:4094336-4094421:-1:exon

XP_036353519.1
type: Protein
SIO_000068: ncbiprotein

position:4270975:-1
position: 4270975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4270910-4270975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4239811-4239883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4237125-4237164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4226333-4226472:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4196420-4196523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4166630-4166756:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4166120-4166188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4165575-4165639:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4149609-4149681:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4128686-4128766:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4117858-4117934:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4117036-4117113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4113226-4113299:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4112902-4112992:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4111666-4111732:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4094336-4094421:-1:exon

LMBR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LMBR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: limb region 1 protein homolog isoform X1
translation: MEGQDEVSAREQHFHSQVRESTICFLLFAILYVVSYFIITRYKRKSDEQEDEDAIVNRISLFLSTFTLAVSAGAVLLLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCLFVLMPFAFFFLESEGFAGLKKGIRARILETLVMLVLLALLILGIVWVALALIDNDAASMESLYDLWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYIITLEEEALQRRLNGLSSSVEYNVLALEQELENVKMLKAKLERRKKASAWERNLVYPAVMVLLLIETSISVLLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMVSSVVGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFGRFNWLGNFYIVLSYNLLFAIVTTLCLVRKFTSAVREELFKALGLHKLHLSNTSRDSEATKPSANGHQKAL
SIO_010081: LMBR1
subclass of: SO_0000673
so part of: LMBR1
location: complement(join(4094336..4094421,4096393..4096554,4111666..4111732,4112902..4112992,4113226..4113299,4117036..4117113,4117858..4117934,4128686..4128766,4149609..4149681,4165575..4165639,4166120..4166188,4166630..4166756,4196420..4196523,4226333..4226472,4237125..4237164,4239811..4239883,4270910..4270975))
location: region:4094336-4270975:-1
so has part: feature:4270910-4270975:-1:exon
so has part: feature:4239811-4239883:-1:exon
so has part: feature:4237125-4237164:-1:exon
so has part: feature:4226333-4226472:-1:exon
so has part: feature:4196420-4196523:-1:exon
so has part: feature:4166630-4166756:-1:exon
so has part: feature:4166120-4166188:-1:exon
so has part: feature:4165575-4165639:-1:exon
so has part: feature:4149609-4149681:-1:exon
so has part: feature:4128686-4128766:-1:exon
so has part: feature:4117858-4117934:-1:exon
so has part: feature:4117036-4117113:-1:exon
so has part: feature:4113226-4113299:-1:exon
so has part: feature:4112902-4112992:-1:exon
so has part: feature:4111666-4111732:-1:exon
so has part: feature:4096393-4096554:-1:exon
so has part: feature:4094336-4094421:-1:exon

XP_004597577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4270910-4270975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4239811-4239883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4237125-4237164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4226333-4226472:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4196420-4196523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4166630-4166756:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4166120-4166188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4165575-4165639:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4149609-4149681:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4128686-4128766:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4117858-4117934:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4117036-4117113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4113226-4113299:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4112902-4112992:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4111666-4111732:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4096393-4096554:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4094336-4094421:-1:exon

LOC105942458
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105942458
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4209408..4210274
location: region:4209408-4210274:1
so has part: feature:4209408-4210274:1:exon

105942458
type: Gene
SIO_000068: ncbigene

position:4209408:1
position: 4209408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4210274:1
position: 4210274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4209408-4210274:1:exon

LOC105942458
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC105942458
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC105942458
subclass of: SO_0000673
so part of: LOC105942458
location: 4209408..4209903
location: region:4209408-4209903:1
so has part: feature:4209408-4209903:1:exon

position:4209903:1
position: 4209903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4209408-4209903:1:exon

LOC105942458
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC105942458
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC105942458
subclass of: SO_0000673
so part of: LOC105942458
location: 4210236..4210274
location: region:4210236-4210274:1
so has part: feature:4210236-4210274:1:exon

position:4210236:1
position: 4210236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4210236-4210274:1:exon

LOC118760385
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4322135..4322631
location: region:4322135-4322631:1
so has part: feature:4322135-4322631:1:exon

118760385
type: Gene
SIO_000068: ncbigene

position:4322135:1
position: 4322135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4322631:1
position: 4322631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4322135-4322631:1:exon

LOC118760385
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118760385
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC118760385
subclass of: SO_0000673
so part of: LOC118760385
location: 4322135..4322631
location: region:4322135-4322631:1
so has part: feature:4322135-4322631:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4322135-4322631:1:exon

NOM1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: NOM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4361911..4386972
location: region:4361911-4386972:1
so has part: feature:4361911-4386972:1:exon
subclass of: SO_0000010

101534507
type: Gene
SIO_000068: ncbigene

position:4361911:1
position: 4361911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4386972:1
position: 4386972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4361911-4386972:1:exon

NOM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: NOM1
product: nucleolar protein with MIF4G domain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597521.2
SIO_010081: NOM1
subclass of: SO_0000673
so part of: NOM1
location: join(4361911..4362339,4362511..4363029,4364443..4364567,4371967..4372162,4376333..4376656,4378854..4378964,4380205..4380372,4381096..4381217,4382471..4382603,4383732..4383863,4386371..4386480,4386798..4386972)
location: region:4361911-4386972:1
so has part: feature:4361911-4362339:1:exon
so has part: feature:4362511-4363029:1:exon
so has part: feature:4364443-4364567:1:exon
so has part: feature:4371967-4372162:1:exon
so has part: feature:4376333-4376656:1:exon
so has part: feature:4378854-4378964:1:exon
so has part: feature:4380205-4380372:1:exon
so has part: feature:4381096-4381217:1:exon
so has part: feature:4382471-4382603:1:exon
so has part: feature:4383732-4383863:1:exon
so has part: feature:4386371-4386480:1:exon
so has part: feature:4386798-4386972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4361911-4362339:1:exon

position:4362339:1
position: 4362339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4362511-4363029:1:exon

position:4362511:1
position: 4362511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4363029:1
position: 4363029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4364443-4364567:1:exon

position:4364443:1
position: 4364443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4364567:1
position: 4364567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4371967-4372162:1:exon

position:4371967:1
position: 4371967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4372162:1
position: 4372162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4376333-4376656:1:exon

position:4376333:1
position: 4376333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4376656:1
position: 4376656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4378854-4378964:1:exon

position:4378854:1
position: 4378854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4378964:1
position: 4378964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4380205-4380372:1:exon

position:4380205:1
position: 4380205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4380372:1
position: 4380372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4381096-4381217:1:exon

position:4381096:1
position: 4381096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4381217:1
position: 4381217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4382471-4382603:1:exon

position:4382471:1
position: 4382471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4382603:1
position: 4382603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4383732-4383863:1:exon

position:4383732:1
position: 4383732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4383863:1
position: 4383863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4386371-4386480:1:exon

position:4386371:1
position: 4386371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4386480:1
position: 4386480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4386798-4386972:1:exon

position:4386798:1
position: 4386798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: NOM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar MIF4G domain-containing protein 1
translation: MAAASSVEGAGPGGPRGTGMKRKGGRGFRRGPGAGGKGPLKRLKLAVEGFVQATSVGDAPGAFQGRAGAGVGSRRNGKKSRKELKKEKRHLKKVRRMQRTGGAAQGPRDEEGESARRPAGKDPSSPRQPPSTQKTRSSPDPNKPRPPAAAEAAARKRALLAANEEEDREIRKLERCLGLNKRKKKGDGSSVPLSFARDGLDYILGALGSGRSSSGLYESSEEEEEDSADTPPDSDLGSDSEDPSEGEEEDGDEEEEEAQAAGEGVQSEDEDEDGPRGDIDAIRKTQEERGRKRVRFAQDEEESPPSSSEDAEPQDESIAESAEKYMPPHARQAEEPVDVPKKEELERLRKQVKGLVNRLSEPNMASISSQLEELYMSHSRKDMNDTLTATLMDACVTGAAMPSRLMMEHILLVSILHHTVGIEVGAHFLEAVVRKFDAMYRNGSEGKECDNLFTIIAHLYNFHVVQSLLVFDILKKLIGTFTEKDIELILLMLKNVGFSLRKDDALSLKELITEAQTKASRAGGRFQDQTRIRFMLETMLALKNNDMRKIPGYDPEPVEKLRKLQRALVRHAGSGAETRLRISWDSVLNAEQTGRWWIVGSAWSGAPMIDSSQQSNPQKQRPGTISSKMLELARKQRMNTDVRRSIFCTIMTSEDFLDAFEKLLKLGLKDQQEREIIHVLLHCCLQEKTYNPFYAFLAGKFCDYERRFQMTFQFSIWDKFRDLENLPATNVSNLVHLVAHLLKTKSLPLSILKVIEFSELDKPRVHFLRKVLNILLLETEAEDLGLIFTRVSDNPKLGMLREGLKLFISHFLLKNAQAHRSAEEANLLRERADLATRSLQGKASLRM
SIO_010081: NOM1
subclass of: SO_0000673
so part of: NOM1
location: join(4361911..4362339,4362511..4363029,4364443..4364567,4371967..4372162,4376333..4376656,4378854..4378964,4380205..4380372,4381096..4381217,4382471..4382603,4383732..4383863,4386371..4386480,4386798..4386972)
location: region:4361911-4386972:1
so has part: feature:4361911-4362339:1:exon
so has part: feature:4362511-4363029:1:exon
so has part: feature:4364443-4364567:1:exon
so has part: feature:4371967-4372162:1:exon
so has part: feature:4376333-4376656:1:exon
so has part: feature:4378854-4378964:1:exon
so has part: feature:4380205-4380372:1:exon
so has part: feature:4381096-4381217:1:exon
so has part: feature:4382471-4382603:1:exon
so has part: feature:4383732-4383863:1:exon
so has part: feature:4386371-4386480:1:exon
so has part: feature:4386798-4386972:1:exon

XP_004597578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4361911-4362339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4362511-4363029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4364443-4364567:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4371967-4372162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4376333-4376656:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4378854-4378964:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4380205-4380372:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4381096-4381217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4382471-4382603:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4383732-4383863:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4386371-4386480:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4386798-4386972:1:exon

MNX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: MNX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4419419..4423722)
location: region:4419419-4423722:-1
so has part: feature:4419419-4423722:-1:exon
subclass of: SO_0000010

101536458
type: Gene
SIO_000068: ncbigene

position:4419419:-1
position: 4419419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4423722:-1
position: 4423722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4419419-4423722:-1:exon

MNX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MNX1
product: motor neuron and pancreas homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_004597525.1
SIO_010081: MNX1
subclass of: SO_0000673
so part of: MNX1
location: complement(join(4419419..4419784,4420333..4420493,4423023..4423722))
location: region:4419419-4423722:-1
so has part: feature:4423023-4423722:-1:exon
so has part: feature:4420333-4420493:-1:exon
so has part: feature:4419419-4419784:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4423023-4423722:-1:exon

position:4423023:-1
position: 4423023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4420333-4420493:-1:exon

position:4420333:-1
position: 4420333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4420493:-1
position: 4420493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4419419-4419784:-1:exon

position:4419784:-1
position: 4419784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MNX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MNX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: motor neuron and pancreas homeobox protein 1
translation: MEKSKNFRIDALLAVDPPRATSAQNSPLALVTSLAAAASGPGGGGGSGGGGASSGASGSCSPASSEPPPAPADRLRSESPSPPRLLAAHCALLPKPGFLGASGGSGGGAGGGPGGPHHHSHPSAAAAAAAAAAAAAAGSLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGGVAGKGGGGGAEEKAEEEPLGPPASGDKGSGRRLRDLRDSDPEEEDDDDDEDHFPYSNGAGAHVPSSDCSSEDDSPPPRSGAPGHQPPAQ
SIO_010081: MNX1
subclass of: SO_0000673
so part of: MNX1
location: complement(join(4419419..4419784,4420333..4420493,4423023..4423722))
location: region:4419419-4423722:-1
so has part: feature:4423023-4423722:-1:exon
so has part: feature:4420333-4420493:-1:exon
so has part: feature:4419419-4419784:-1:exon

XP_004597582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4423023-4423722:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4420333-4420493:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4419419-4419784:-1:exon

LOC118760386
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4465506..4466581)
location: region:4465506-4466581:-1
so has part: feature:4465506-4466581:-1:exon

118760386
type: Gene
SIO_000068: ncbigene

position:4465506:-1
position: 4465506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4466581:-1
position: 4466581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4465506-4466581:-1:exon

LOC118760386
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118760386
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC118760386
subclass of: SO_0000673
so part of: LOC118760386
location: complement(4465506..4465895)
location: region:4465506-4465895:-1
so has part: feature:4465506-4465895:-1:exon

position:4465895:-1
position: 4465895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4465506-4465895:-1:exon

LOC118760386
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118760386
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC118760386
subclass of: SO_0000673
so part of: LOC118760386
location: complement(4466552..4466581)
location: region:4466552-4466581:-1
so has part: feature:4466552-4466581:-1:exon

position:4466552:-1
position: 4466552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4466552-4466581:-1:exon

UBE3C
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: UBE3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4536686..4641826
location: region:4536686-4641826:1
so has part: feature:4536686-4641826:1:exon
subclass of: SO_0000010

101536708
type: Gene
SIO_000068: ncbigene

position:4536686:1
position: 4536686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4641826:1
position: 4641826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4536686-4641826:1:exon

UBE3C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: UBE3C
product: ubiquitin protein ligase E3C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 4 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597526.1
SIO_010081: UBE3C
subclass of: SO_0000673
so part of: UBE3C
location: join(4536686..4536769,4555671..4555724,4559184..4559258,4561665..4561811,4563133..4563248,4566097..4566254,4570270..4570423,4570828..4571048,4573629..4573780,4575853..4576040,4582528..4582614,4586102..4586259,4586766..4586998,4592767..4592871,4593979..4594066,4596368..4596465,4598115..4598247,4602757..4603004,4615674..4615886,4623625..4623813,4623909..4623975,4641654..4641826)
location: region:4536686-4641826:1
so has part: feature:4536686-4536769:1:exon
so has part: feature:4555671-4555724:1:exon
so has part: feature:4559184-4559258:1:exon
so has part: feature:4561665-4561811:1:exon
so has part: feature:4563133-4563248:1:exon
so has part: feature:4566097-4566254:1:exon
so has part: feature:4570270-4570423:1:exon
so has part: feature:4570828-4571048:1:exon
so has part: feature:4573629-4573780:1:exon
so has part: feature:4575853-4576040:1:exon
so has part: feature:4582528-4582614:1:exon
so has part: feature:4586102-4586259:1:exon
so has part: feature:4586766-4586998:1:exon
so has part: feature:4592767-4592871:1:exon
so has part: feature:4593979-4594066:1:exon
so has part: feature:4596368-4596465:1:exon
so has part: feature:4598115-4598247:1:exon
so has part: feature:4602757-4603004:1:exon
so has part: feature:4615674-4615886:1:exon
so has part: feature:4623625-4623813:1:exon
so has part: feature:4623909-4623975:1:exon
so has part: feature:4641654-4641826:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4536686-4536769:1:exon

position:4536769:1
position: 4536769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4555671-4555724:1:exon

position:4555671:1
position: 4555671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4555724:1
position: 4555724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4559184-4559258:1:exon

position:4559184:1
position: 4559184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4559258:1
position: 4559258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4561665-4561811:1:exon

position:4561665:1
position: 4561665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4561811:1
position: 4561811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4563133-4563248:1:exon

position:4563133:1
position: 4563133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4563248:1
position: 4563248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4566097-4566254:1:exon

position:4566097:1
position: 4566097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4566254:1
position: 4566254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4570270-4570423:1:exon

position:4570270:1
position: 4570270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4570423:1
position: 4570423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4570828-4571048:1:exon

position:4570828:1
position: 4570828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4571048:1
position: 4571048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4573629-4573780:1:exon

position:4573629:1
position: 4573629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4573780:1
position: 4573780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4575853-4576040:1:exon

position:4575853:1
position: 4575853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4576040:1
position: 4576040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4582528-4582614:1:exon

position:4582528:1
position: 4582528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4582614:1
position: 4582614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4586102-4586259:1:exon

position:4586102:1
position: 4586102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4586259:1
position: 4586259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4586766-4586998:1:exon

position:4586766:1
position: 4586766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4586998:1
position: 4586998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4592767-4592871:1:exon

position:4592767:1
position: 4592767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4592871:1
position: 4592871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4593979-4594066:1:exon

position:4593979:1
position: 4593979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4594066:1
position: 4594066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4596368-4596465:1:exon

position:4596368:1
position: 4596368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4596465:1
position: 4596465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4598115-4598247:1:exon

position:4598115:1
position: 4598115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4598247:1
position: 4598247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4602757-4603004:1:exon

position:4602757:1
position: 4602757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4603004:1
position: 4603004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4615674-4615886:1:exon

position:4615674:1
position: 4615674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4615886:1
position: 4615886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4623625-4623813:1:exon

position:4623625:1
position: 4623625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4623813:1
position: 4623813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4623909-4623975:1:exon

position:4623909:1
position: 4623909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4623975:1
position: 4623975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4641654-4641826:1:exon

position:4641654:1
position: 4641654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE3C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: UBE3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-protein ligase E3C
translation: MFSFEGDFKTRPKVSLGGASRKEEKASLLHRTQEERRKREEERRRLKNAIIIQSFIRGCRDRKQQYSIQRSAFDRCANLSQSGGTFPIANGPNLTLLVRQLLFFYKQNEDSKRLIWLYQNLIKHHSLFVKQLEGSERLTCLFQIKRLMSLCCRLLQNCNDDSLNVALPMRMLEVFSSENTYLPVLQDASYVVSVIEQILHYMIQNGYYRSLYLLINSKLPSSIEYSDLSRVPIAKTLLENVLKPLHFTYNSCPEGARQQVFSAFTEEFLAAPFTDQIFHFVIPALADAQTAFPYEPFLSALLLQEGSFSRRSAGAPWLFYFVLTVGESYLGALSEEGLLEYLRVLQTFLSQLPVSPASTSCHDSASDSEDESEEADKPTSPEDGRLSIPYITEECLKKLDTKQQTNTLLNLVWRDSASEEVFTRMASICHTLMVQHRMMVPKVRLLYSLAFNARFLRHLWYLISSMTTRMITGSMVPLLQVISRGSPMSFEDSSRIIPLFYLFSSLFSHSLISIHDNEFFGDPIEVVGHRQSSMMPFTLEELIVLSRCLRDACLGIIKLAYPETKPEVREEYITAFQSIGVTTSSEMQQCIQMEQKRWIQLFKVITNLVKMLKSRDTRRSFCPPNHWLSEQEDIKADKVTQLYVPASRHVWRFRRMGRIGPLQSTLEVGLESPPLSVSEERQLAILTELPFVVPFEERVKIFQRLIYADKQEVQGDGPFLDGINVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSGFNPNQGFFKTTNEGLLYPNPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFFLSKLLGTSADVDIHHLASLDPEVYKNLLFLKSYEGDVEELGLNFTVVNNDLGEAQVVELKFGGKDIPVTSANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVSLEWLRMFDQQEVQVLISGAQVPISLEDLKSFTNYSGGYSADHPVIKLFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKVHSFIPFTLKNKL
SIO_010081: UBE3C
subclass of: SO_0000673
so part of: UBE3C
location: join(4536704..4536769,4555671..4555724,4559184..4559258,4561665..4561811,4563133..4563248,4566097..4566254,4570270..4570423,4570828..4571048,4573629..4573780,4575853..4576040,4582528..4582614,4586102..4586259,4586766..4586998,4592767..4592871,4593979..4594066,4596368..4596465,4598115..4598247,4602757..4603004,4615674..4615886,4623625..4623813,4623909..4623975,4641654..4641826)
location: region:4536704-4641826:1
so has part: feature:4536704-4536769:1:exon
so has part: feature:4555671-4555724:1:exon
so has part: feature:4559184-4559258:1:exon
so has part: feature:4561665-4561811:1:exon
so has part: feature:4563133-4563248:1:exon
so has part: feature:4566097-4566254:1:exon
so has part: feature:4570270-4570423:1:exon
so has part: feature:4570828-4571048:1:exon
so has part: feature:4573629-4573780:1:exon
so has part: feature:4575853-4576040:1:exon
so has part: feature:4582528-4582614:1:exon
so has part: feature:4586102-4586259:1:exon
so has part: feature:4586766-4586998:1:exon
so has part: feature:4592767-4592871:1:exon
so has part: feature:4593979-4594066:1:exon
so has part: feature:4596368-4596465:1:exon
so has part: feature:4598115-4598247:1:exon
so has part: feature:4602757-4603004:1:exon
so has part: feature:4615674-4615886:1:exon
so has part: feature:4623625-4623813:1:exon
so has part: feature:4623909-4623975:1:exon
so has part: feature:4641654-4641826:1:exon

XP_004597583.1
type: Protein
SIO_000068: ncbiprotein

position:4536704:1
position: 4536704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4536704-4536769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4555671-4555724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4559184-4559258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4561665-4561811:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4563133-4563248:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4566097-4566254:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4570270-4570423:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4570828-4571048:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4573629-4573780:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4575853-4576040:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4582528-4582614:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4586102-4586259:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4586766-4586998:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4592767-4592871:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4593979-4594066:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4596368-4596465:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4598115-4598247:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4602757-4603004:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4615674-4615886:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4623625-4623813:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4623909-4623975:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4641654-4641826:1:exon

NCAPG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: NCAPG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4720114..4790523
location: region:4720114-4790523:1
so has part: feature:4720114-4790523:1:exon
subclass of: SO_0000010

101523493
type: Gene
SIO_000068: ncbigene

position:4720114:1
position: 4720114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4790523:1
position: 4790523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4720114-4790523:1:exon

NCAPG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: NCAPG2
product: non-SMC condensin II complex subunit G2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 4 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004599018.3
SIO_010081: NCAPG2
subclass of: SO_0000673
so part of: NCAPG2
location: join(4720114..4720195,4721849..4721965,4723219..4723407,4724438..4724552,4726858..4727012,4728239..4728373,4730362..4730456,4734230..4734299,4737865..4737951,4742715..4742810,4743448..4743573,4747127..4747306,4750998..4751150,4756259..4756481,4756692..4756795,4760076..4760249,4762580..4762650,4763094..4763247,4763360..4763533,4764216..4764329,4764417..4764557,4765290..4765389,4769300..4769487,4771566..4771706,4775812..4775915,4776875..4776975,4778695..4778794,4790132..4790523)
location: region:4720114-4790523:1
so has part: feature:4720114-4720195:1:exon
so has part: feature:4721849-4721965:1:exon
so has part: feature:4723219-4723407:1:exon
so has part: feature:4724438-4724552:1:exon
so has part: feature:4726858-4727012:1:exon
so has part: feature:4728239-4728373:1:exon
so has part: feature:4730362-4730456:1:exon
so has part: feature:4734230-4734299:1:exon
so has part: feature:4737865-4737951:1:exon
so has part: feature:4742715-4742810:1:exon
so has part: feature:4743448-4743573:1:exon
so has part: feature:4747127-4747306:1:exon
so has part: feature:4750998-4751150:1:exon
so has part: feature:4756259-4756481:1:exon
so has part: feature:4756692-4756795:1:exon
so has part: feature:4760076-4760249:1:exon
so has part: feature:4762580-4762650:1:exon
so has part: feature:4763094-4763247:1:exon
so has part: feature:4763360-4763533:1:exon
so has part: feature:4764216-4764329:1:exon
so has part: feature:4764417-4764557:1:exon
so has part: feature:4765290-4765389:1:exon
so has part: feature:4769300-4769487:1:exon
so has part: feature:4771566-4771706:1:exon
so has part: feature:4775812-4775915:1:exon
so has part: feature:4776875-4776975:1:exon
so has part: feature:4778695-4778794:1:exon
so has part: feature:4790132-4790523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4720114-4720195:1:exon

position:4720195:1
position: 4720195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4721849-4721965:1:exon

position:4721849:1
position: 4721849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4721965:1
position: 4721965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4723219-4723407:1:exon

position:4723219:1
position: 4723219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4723407:1
position: 4723407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4724438-4724552:1:exon

position:4724438:1
position: 4724438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4724552:1
position: 4724552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4726858-4727012:1:exon

position:4726858:1
position: 4726858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4727012:1
position: 4727012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4728239-4728373:1:exon

position:4728239:1
position: 4728239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4728373:1
position: 4728373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4730362-4730456:1:exon

position:4730362:1
position: 4730362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4730456:1
position: 4730456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4734230-4734299:1:exon

position:4734230:1
position: 4734230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4734299:1
position: 4734299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4737865-4737951:1:exon

position:4737865:1
position: 4737865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4737951:1
position: 4737951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4742715-4742810:1:exon

position:4742715:1
position: 4742715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4742810:1
position: 4742810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4743448-4743573:1:exon

position:4743448:1
position: 4743448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4743573:1
position: 4743573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4747127-4747306:1:exon

position:4747127:1
position: 4747127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4747306:1
position: 4747306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4750998-4751150:1:exon

position:4750998:1
position: 4750998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4751150:1
position: 4751150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4756259-4756481:1:exon

position:4756259:1
position: 4756259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4756481:1
position: 4756481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4756692-4756795:1:exon

position:4756692:1
position: 4756692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4756795:1
position: 4756795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4760076-4760249:1:exon

position:4760076:1
position: 4760076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4760249:1
position: 4760249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4762580-4762650:1:exon

position:4762580:1
position: 4762580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4762650:1
position: 4762650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4763094-4763247:1:exon

position:4763094:1
position: 4763094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4763247:1
position: 4763247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4763360-4763533:1:exon

position:4763360:1
position: 4763360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4763533:1
position: 4763533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4764216-4764329:1:exon

position:4764216:1
position: 4764216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4764329:1
position: 4764329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4764417-4764557:1:exon

position:4764417:1
position: 4764417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4764557:1
position: 4764557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4765290-4765389:1:exon

position:4765290:1
position: 4765290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4765389:1
position: 4765389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4769300-4769487:1:exon

position:4769300:1
position: 4769300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4769487:1
position: 4769487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4771566-4771706:1:exon

position:4771566:1
position: 4771566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4771706:1
position: 4771706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4775812-4775915:1:exon

position:4775812:1
position: 4775812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4775915:1
position: 4775915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4776875-4776975:1:exon

position:4776875:1
position: 4776875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4776975:1
position: 4776975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4778695-4778794:1:exon

position:4778695:1
position: 4778695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4778794:1
position: 4778794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4790132-4790523:1:exon

position:4790132:1
position: 4790132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NCAPG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: NCAPG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: condensin-2 complex subunit G2
translation: MEKRENFVQAVSKELVGEFLQFVQLDKEASDPFSLNELLEELSRKQKEELWDRLKNLLTNMLLESPVEGWQEVQVQGEDAMETEHSSKMKKNIEIMHAITSVILVSVSVINESENFEALLECAVILNGVLYALPESERKLQNSIQDLCVRWWEKGLPAKEDMGKTAFIMLLRKSLETKRGADICRLWRIHQALYCFDYDLEESSEIKDMLLECFINTNYIKKEEGRRFLSSLFNWNVKFVKMIHETIKNQLQGLQKSLMVHIAEIYFRAWRKASGKMLEAIENDCIQDFMFHGVHLPRKSPVHSKVREILSYFHHQKKIRQGVEEMLYRLYKPILWRGLKARNSEVRSNAALLFVEAFPIRDPNFLAVEMDSEIQRQFEELYSLLEDPYPMVRSTGILGVCKIASKYWELMPPTILIDLLKKVTGELAFDTSSADVRCSVFKCLPIILDNKLSHPLLEQLLPSLKYCLHDNSEKVRVAFVDMLLKIKAVRAAKFWKICPMEHILVRLQTDSRPVCRRLVSLIFNSFLPVNQPEEVWCERCVTLIQMNHAAARRFYQYAHEHTACTNIAKLIHVIRHCLNACIQRAMRECREDDEEREKENESVLDKTLSVSDAASMAGLLEVVVILWKSIHGSIENNKEAKVYTVNKFASVLPEYLKVFKDDRCKIPLFMLMSFLPASAVPPFSCGVISTLRNQEESSVDKSYCTLLDCLCSWGQVGHILELLDDWLPGQQPQVKSNSASKRKVQIHDARPVKPELALTYIEYLLTHPKNRECLLSAPQRKLNHLLKALETSKADLELLLQSPAGKPAVSDTTALRAFSLHCRLSIHLQHKFCTEGKVYLSVLEDTGFWLESKVLSFIQDQEEEYLKLHRVLYQQIIQTYLTVCKDVVMVGLGDLKFQTKLLQRTLGIMQTVKGFFYVSSLLGILKETTGNPCIQRIDSEEEVTALFETVQQVFQKMLECIARSFRKQPEEGLRLLYSVQTPFHEFITTVQSWHVDTPVHRGILSTLIAAPVVEISHRLRKISDIEEFTPPECVSDLPPFSRCLVGIILKSSNVVRSFLDELKSCVLSDDIEGIVCLTAVLHIILVVNKGKHKNSKVKEVAAIVHRKLKTFMEITLEEDSIERFLYESSTRTLGELLNS
SIO_010081: NCAPG2
subclass of: SO_0000673
so part of: NCAPG2
location: join(4721888..4721965,4723219..4723407,4724438..4724552,4726858..4727012,4728239..4728373,4730362..4730456,4734230..4734299,4737865..4737951,4742715..4742810,4743448..4743573,4747127..4747306,4750998..4751150,4756259..4756481,4756692..4756795,4760076..4760249,4762580..4762650,4763094..4763247,4763360..4763533,4764216..4764329,4764417..4764557,4765290..4765389,4769300..4769487,4771566..4771706,4775812..4775915,4776875..4776975,4778695..4778794,4790132..4790183)
location: region:4721888-4790183:1
so has part: feature:4721888-4721965:1:exon
so has part: feature:4723219-4723407:1:exon
so has part: feature:4724438-4724552:1:exon
so has part: feature:4726858-4727012:1:exon
so has part: feature:4728239-4728373:1:exon
so has part: feature:4730362-4730456:1:exon
so has part: feature:4734230-4734299:1:exon
so has part: feature:4737865-4737951:1:exon
so has part: feature:4742715-4742810:1:exon
so has part: feature:4743448-4743573:1:exon
so has part: feature:4747127-4747306:1:exon
so has part: feature:4750998-4751150:1:exon
so has part: feature:4756259-4756481:1:exon
so has part: feature:4756692-4756795:1:exon
so has part: feature:4760076-4760249:1:exon
so has part: feature:4762580-4762650:1:exon
so has part: feature:4763094-4763247:1:exon
so has part: feature:4763360-4763533:1:exon
so has part: feature:4764216-4764329:1:exon
so has part: feature:4764417-4764557:1:exon
so has part: feature:4765290-4765389:1:exon
so has part: feature:4769300-4769487:1:exon
so has part: feature:4771566-4771706:1:exon
so has part: feature:4775812-4775915:1:exon
so has part: feature:4776875-4776975:1:exon
so has part: feature:4778695-4778794:1:exon
so has part: feature:4790132-4790183:1:exon

XP_004599075.2
type: Protein
SIO_000068: ncbiprotein

position:4721888:1
position: 4721888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4790183:1
position: 4790183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4721888-4721965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4723219-4723407:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4724438-4724552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4726858-4727012:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4728239-4728373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4730362-4730456:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4734230-4734299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4737865-4737951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4742715-4742810:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4743448-4743573:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4747127-4747306:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4750998-4751150:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4756259-4756481:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4756692-4756795:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4760076-4760249:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4762580-4762650:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4763094-4763247:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4763360-4763533:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4764216-4764329:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4764417-4764557:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4765290-4765389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4769300-4769487:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4771566-4771706:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4775812-4775915:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4776875-4776975:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4778695-4778794:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4790132-4790183:1:exon

LOC118760404
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760404
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4740154..4740267
location: region:4740154-4740267:1
so has part: feature:4740154-4740267:1:exon
subclass of: SO_0000578

118760404
type: Gene
SIO_000068: ncbigene

position:4740154:1
position: 4740154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4740267:1
position: 4740267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4740154-4740267:1:exon

LOC118760404
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118760404
product: small nucleolar RNA SNORA38
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00428
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996768.1
SIO_010081: LOC118760404
subclass of: SO_0000673
so part of: LOC118760404
location: 4740154..4740267
location: region:4740154-4740267:1
so has part: feature:4740154-4740267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4740154-4740267:1:exon

LOC118760388
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760388
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4776218..4776380
location: region:4776218-4776380:1
so has part: feature:4776218-4776380:1:exon
subclass of: SO_0000623

118760388
type: Gene
SIO_000068: ncbigene

position:4776218:1
position: 4776218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4776380:1
position: 4776380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4776218-4776380:1:exon

LOC118760388
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118760388
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996754.1
SIO_010081: LOC118760388
subclass of: SO_0000673
so part of: LOC118760388
location: 4776218..4776380
location: region:4776218-4776380:1
so has part: feature:4776218-4776380:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4776218-4776380:1:exon

PTPRN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PTPRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5087381..5854755
location: region:5087381-5854755:1
so has part: feature:5087381-5854755:1:exon
subclass of: SO_0000010

101523737
type: Gene
SIO_000068: ncbigene

position:5087381:1
position: 5087381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5854755:1
position: 5854755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5087381-5854755:1:exon

PTPRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PTPRN2
product: protein tyrosine phosphatase receptor type N2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_012930899.1
SIO_010081: PTPRN2
subclass of: SO_0000673
so part of: PTPRN2
location: join(5087381..5087441,5100282..5100395,5221517..5221619,5241390..5241552,5259471..5259828,5272706..5272711,5282996..5283196,5284466..5284512,5288074..5288450,5309130..5309216,5327556..5327635,5506832..5506896,5723760..5723972,5748700..5748894,5781999..5782146,5799942..5800015,5806885..5806962,5821665..5821784,5822866..5823032,5828014..5828067,5830198..5830262,5847591..5847664,5854684..5854755)
location: region:5087381-5854755:1
so has part: feature:5087381-5087441:1:exon
so has part: feature:5100282-5100395:1:exon
so has part: feature:5221517-5221619:1:exon
so has part: feature:5241390-5241552:1:exon
so has part: feature:5259471-5259828:1:exon
so has part: feature:5272706-5272711:1:exon
so has part: feature:5282996-5283196:1:exon
so has part: feature:5284466-5284512:1:exon
so has part: feature:5288074-5288450:1:exon
so has part: feature:5309130-5309216:1:exon
so has part: feature:5327556-5327635:1:exon
so has part: feature:5506832-5506896:1:exon
so has part: feature:5723760-5723972:1:exon
so has part: feature:5748700-5748894:1:exon
so has part: feature:5781999-5782146:1:exon
so has part: feature:5799942-5800015:1:exon
so has part: feature:5806885-5806962:1:exon
so has part: feature:5821665-5821784:1:exon
so has part: feature:5822866-5823032:1:exon
so has part: feature:5828014-5828067:1:exon
so has part: feature:5830198-5830262:1:exon
so has part: feature:5847591-5847664:1:exon
so has part: feature:5854684-5854755:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5087381-5087441:1:exon

position:5087441:1
position: 5087441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5100282-5100395:1:exon

position:5100282:1
position: 5100282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5100395:1
position: 5100395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5221517-5221619:1:exon

position:5221517:1
position: 5221517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5221619:1
position: 5221619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5241390-5241552:1:exon

position:5241390:1
position: 5241390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5241552:1
position: 5241552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5259471-5259828:1:exon

position:5259471:1
position: 5259471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5259828:1
position: 5259828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5272706-5272711:1:exon

position:5272706:1
position: 5272706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5272711:1
position: 5272711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5282996-5283196:1:exon

position:5282996:1
position: 5282996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5283196:1
position: 5283196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5284466-5284512:1:exon

position:5284466:1
position: 5284466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5284512:1
position: 5284512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5288074-5288450:1:exon

position:5288074:1
position: 5288074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5288450:1
position: 5288450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5309130-5309216:1:exon

position:5309130:1
position: 5309130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5309216:1
position: 5309216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5327556-5327635:1:exon

position:5327556:1
position: 5327556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5327635:1
position: 5327635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5506832-5506896:1:exon

position:5506832:1
position: 5506832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5506896:1
position: 5506896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5723760-5723972:1:exon

position:5723760:1
position: 5723760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5723972:1
position: 5723972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5748700-5748894:1:exon

position:5748700:1
position: 5748700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5748894:1
position: 5748894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5781999-5782146:1:exon

position:5781999:1
position: 5781999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5782146:1
position: 5782146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5799942-5800015:1:exon

position:5799942:1
position: 5799942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5800015:1
position: 5800015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5806885-5806962:1:exon

position:5806885:1
position: 5806885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5806962:1
position: 5806962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5821665-5821784:1:exon

position:5821665:1
position: 5821665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5821784:1
position: 5821784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5822866-5823032:1:exon

position:5822866:1
position: 5822866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5823032:1
position: 5823032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5828014-5828067:1:exon

position:5828014:1
position: 5828014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5828067:1
position: 5828067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5830198-5830262:1:exon

position:5830198:1
position: 5830198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5830262:1
position: 5830262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5847591-5847664:1:exon

position:5847591:1
position: 5847591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5847664:1
position: 5847664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5854684-5854755:1:exon

position:5854684:1
position: 5854684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PTPRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase N2
translation: MALWKNRFPANFALVTRIVHDGVFGRCQKVPARDTYRYEVSPVVLQHLRVTLQKLSRTGFTWQDDYTQHVMAQELANLPKTYPRHPEAPSSARTSKQNVDTDKRHSLEDDVALAKTLQRYLPYLGALSQATASNVYPRKKQDRATTEGYSPFPDSILTYVAHTSALTYPPVSRTKYPEELSPRAFSRLQPDELSPKVDSSMDRQHLIAALSAYTAQRSPATSREGDPGLQYLLRAPSRAPRPFLAPSVSQKWSSPPEDPKDPSMDDETVLQNLLKDLRKQQADVDSLSSLELDEMAHVIASAIQGGDAGGGQADRGRGAGGEPRGQVDSLAATLQDNRVHGDDDDERAYQEVNRLSVKLGDLLQERGSQLSPGSPTLVKPFKTEMKKSEEPEASLSSEEENAGVEDVKSQTYSKDLLEMPYSAPRLRLEEPPNWTQWPVKEEQSLPTRVRGPASDTLQLEVKSSEEDEYGYVVTQHDPLSLEKGKQLMEDIARLLQVPPSIFSDINVVGSAVTFKVNANVHNVTTADIAKTTADHKDKLEQTSGLKILQTGTGSKSQLKLLPHQADQEDSTKFAVLTFLSVACIVGVLLTSGLIYCIRHSSHYKLREKLSGLGGHAGADATAAYQELCRQRMAVRPSDRPEGQHTSRINSVSSQFSDGPMPSPSARSSTSSWSEEPVQSNMDISTGHMILAYMEDHLKNKNRLEKEWEALCAYQAEPNSSLVAQREENVPKNRSPAVLTYDHSRILLKSENSHSNSDYINASPIMDHDPRNPAYIATQGPLPATVADFWQMVWESGCVVIVMLTPLTENGVRQCYHYWPDEGSNLYHVYEVNLVSEHIWCEDFLVRSFYLKNLQTNETRTVTQFHFLSWYDQGVPSSTRPLLDFRRKVNKCYRGRSCPIIVHCSDGAGRSGTYVLIDMVLNKMAKGAKEIDIAATLEHLRDQRPGMVQTKEQFEFALTAVAEEVNAILKALPQ
SIO_010081: PTPRN2
subclass of: SO_0000673
so part of: PTPRN2
location: join(5087381..5087441,5100282..5100395,5221517..5221619,5241390..5241552,5259471..5259828,5272706..5272711,5282996..5283196,5284466..5284512,5288074..5288450,5309130..5309216,5327556..5327635,5506832..5506896,5723760..5723972,5748700..5748894,5781999..5782146,5799942..5800015,5806885..5806962,5821665..5821784,5822866..5823032,5828014..5828067,5830198..5830262,5847591..5847664,5854684..5854755)
location: region:5087381-5854755:1
so has part: feature:5087381-5087441:1:exon
so has part: feature:5100282-5100395:1:exon
so has part: feature:5221517-5221619:1:exon
so has part: feature:5241390-5241552:1:exon
so has part: feature:5259471-5259828:1:exon
so has part: feature:5272706-5272711:1:exon
so has part: feature:5282996-5283196:1:exon
so has part: feature:5284466-5284512:1:exon
so has part: feature:5288074-5288450:1:exon
so has part: feature:5309130-5309216:1:exon
so has part: feature:5327556-5327635:1:exon
so has part: feature:5506832-5506896:1:exon
so has part: feature:5723760-5723972:1:exon
so has part: feature:5748700-5748894:1:exon
so has part: feature:5781999-5782146:1:exon
so has part: feature:5799942-5800015:1:exon
so has part: feature:5806885-5806962:1:exon
so has part: feature:5821665-5821784:1:exon
so has part: feature:5822866-5823032:1:exon
so has part: feature:5828014-5828067:1:exon
so has part: feature:5830198-5830262:1:exon
so has part: feature:5847591-5847664:1:exon
so has part: feature:5854684-5854755:1:exon

XP_012786353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5087381-5087441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5100282-5100395:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5221517-5221619:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5241390-5241552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5259471-5259828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5272706-5272711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5282996-5283196:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5284466-5284512:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5288074-5288450:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5309130-5309216:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5327556-5327635:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5506832-5506896:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5723760-5723972:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5748700-5748894:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5781999-5782146:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5799942-5800015:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5806885-5806962:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5821665-5821784:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5822866-5823032:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5828014-5828067:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5830198-5830262:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5847591-5847664:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5854684-5854755:1:exon

LOC118760407
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760407
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5675665..5675730
location: region:5675665-5675730:1
so has part: feature:5675665-5675730:1:exon
subclass of: SO_0000578

118760407
type: Gene
SIO_000068: ncbigene

position:5675665:1
position: 5675665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5675730:1
position: 5675730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5675665-5675730:1:exon

LOC118760407
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118760407
product: small nucleolar RNA SNORD77
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00591
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996771.1
SIO_010081: LOC118760407
subclass of: SO_0000673
so part of: LOC118760407
location: 5675665..5675730
location: region:5675665-5675730:1
so has part: feature:5675665-5675730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5675665-5675730:1:exon

DNAJB6
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: DNAJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5960249..6045473)
location: region:5960249-6045473:-1
so has part: feature:5960249-6045473:-1:exon
subclass of: SO_0000010

101522917
type: Gene
SIO_000068: ncbigene

position:5960249:-1
position: 5960249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6045473:-1
position: 6045473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5960249-6045473:-1:exon

DNAJB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: DNAJB6
product: DnaJ heat shock protein family (Hsp40) member B6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004599015.2
SIO_010081: DNAJB6
subclass of: SO_0000673
so part of: DNAJB6
location: complement(join(5960249..5960331,5964235..5964429,5983058..5983128,5983644..5983785,5985322..5985453,5999160..5999270,6000187..6000246,6005131..6005240,6008815..6008905,6040918..6041124,6045290..6045473))
location: region:5960249-6045473:-1
so has part: feature:6045290-6045473:-1:exon
so has part: feature:6040918-6041124:-1:exon
so has part: feature:6008815-6008905:-1:exon
so has part: feature:6005131-6005240:-1:exon
so has part: feature:6000187-6000246:-1:exon
so has part: feature:5999160-5999270:-1:exon
so has part: feature:5985322-5985453:-1:exon
so has part: feature:5983644-5983785:-1:exon
so has part: feature:5983058-5983128:-1:exon
so has part: feature:5964235-5964429:-1:exon
so has part: feature:5960249-5960331:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6045290-6045473:-1:exon

position:6045290:-1
position: 6045290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6040918-6041124:-1:exon

position:6040918:-1
position: 6040918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6041124:-1
position: 6041124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6008815-6008905:-1:exon

position:6008815:-1
position: 6008815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6008905:-1
position: 6008905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6005131-6005240:-1:exon

position:6005131:-1
position: 6005131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6005240:-1
position: 6005240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6000187-6000246:-1:exon

position:6000187:-1
position: 6000187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6000246:-1
position: 6000246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5999160-5999270:-1:exon

position:5999160:-1
position: 5999160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5999270:-1
position: 5999270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5985322-5985453:-1:exon

position:5985322:-1
position: 5985322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5985453:-1
position: 5985453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5983644-5983785:-1:exon

position:5983644:-1
position: 5983644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5983785:-1
position: 5983785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5983058-5983128:-1:exon

position:5983058:-1
position: 5983058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5983128:-1
position: 5983128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5964235-5964429:-1:exon

position:5964235:-1
position: 5964235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5964429:-1
position: 5964429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5960249-5960331:-1:exon

position:5960331:-1
position: 5960331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DNAJB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: DNAJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily B member 6 isoform X1
translation: MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPEDVFREFFGGRDPFSFDFFEDPLEDFFGSRRGPRGNRSRGPGLFFSAFSGFPAFGGGFPAFDTGFTSFGSLGHGGITSFSSSSFGGSGMGNFKSVSTSTKIVNGRKITTKRIVENGQERVEIEEDGQLKSLTINGVADEHALAEECLRRGQQALPASTRPHKPALPRHTPAARHTPHSVWEEDEERVPGGGWEPPTCSAGIKEGGKRKKQKQKEESKKKKSTKGNH
SIO_010081: DNAJB6
subclass of: SO_0000673
so part of: DNAJB6
location: complement(join(5960249..5960331,5964235..5964429,5983058..5983128,5983644..5983785,5985322..5985453,5999160..5999270,6000187..6000246,6005131..6005240,6008815..6008879))
location: region:5960249-6008879:-1
so has part: feature:6008815-6008879:-1:exon
so has part: feature:6005131-6005240:-1:exon
so has part: feature:6000187-6000246:-1:exon
so has part: feature:5999160-5999270:-1:exon
so has part: feature:5985322-5985453:-1:exon
so has part: feature:5983644-5983785:-1:exon
so has part: feature:5983058-5983128:-1:exon
so has part: feature:5964235-5964429:-1:exon
so has part: feature:5960249-5960331:-1:exon

XP_004599072.1
type: Protein
SIO_000068: ncbiprotein

position:6008879:-1
position: 6008879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6008815-6008879:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6005131-6005240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6000187-6000246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5999160-5999270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5985322-5985453:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5983644-5983785:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5983058-5983128:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5964235-5964429:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5960249-5960331:-1:exon

DNAJB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: DNAJB6
product: DnaJ heat shock protein family (Hsp40) member B6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004599017.2
SIO_010081: DNAJB6
subclass of: SO_0000673
so part of: DNAJB6
location: complement(join(5982364..5983128,5983644..5983785,5985322..5985450,5999160..5999270,6000187..6000246,6005131..6005240,6008815..6008905,6040918..6041124,6045290..6045473))
location: region:5982364-6045473:-1
so has part: feature:6045290-6045473:-1:exon
so has part: feature:6040918-6041124:-1:exon
so has part: feature:6008815-6008905:-1:exon
so has part: feature:6005131-6005240:-1:exon
so has part: feature:6000187-6000246:-1:exon
so has part: feature:5999160-5999270:-1:exon
so has part: feature:5985322-5985450:-1:exon
so has part: feature:5983644-5983785:-1:exon
so has part: feature:5982364-5983128:-1:exon

position:5982364:-1
position: 5982364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6045290-6045473:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6040918-6041124:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6008815-6008905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6005131-6005240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6000187-6000246:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5999160-5999270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5985322-5985450:-1:exon

position:5985450:-1
position: 5985450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5983644-5983785:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5982364-5983128:-1:exon

DNAJB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: DNAJB6
product: DnaJ heat shock protein family (Hsp40) member B6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012930901.1
SIO_010081: DNAJB6
subclass of: SO_0000673
so part of: DNAJB6
location: complement(join(5982364..5983128,5983644..5983785,5985322..5985453,5999160..5999270,6000187..6000246,6005131..6005240,6008815..6008905,6040918..6041124,6045290..6045473))
location: region:5982364-6045473:-1
so has part: feature:6045290-6045473:-1:exon
so has part: feature:6040918-6041124:-1:exon
so has part: feature:6008815-6008905:-1:exon
so has part: feature:6005131-6005240:-1:exon
so has part: feature:6000187-6000246:-1:exon
so has part: feature:5999160-5999270:-1:exon
so has part: feature:5985322-5985453:-1:exon
so has part: feature:5983644-5983785:-1:exon
so has part: feature:5982364-5983128:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6045290-6045473:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6040918-6041124:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6008815-6008905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6005131-6005240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6000187-6000246:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5999160-5999270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5985322-5985453:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5983644-5983785:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5982364-5983128:-1:exon

DNAJB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: DNAJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily B member 6 isoform X4
translation: MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPEDVFREFFGGRDPFSFDFFDPLEDFFGSRRGPRGNRSRGPGLFFSAFSGFPAFGGGFPAFDTGFTSFGSLGHGGITSFSSSSFGGSGMGNFKSVSTSTKIVNGRKITTKRIVENGQERVEIEEDGQLKSLTINGKEQPLRLDNK
SIO_010081: DNAJB6
subclass of: SO_0000673
so part of: DNAJB6
location: complement(join(5983023..5983128,5983644..5983785,5985322..5985450,5999160..5999270,6000187..6000246,6005131..6005240,6008815..6008879))
location: region:5983023-6008879:-1
so has part: feature:6008815-6008879:-1:exon
so has part: feature:6005131-6005240:-1:exon
so has part: feature:6000187-6000246:-1:exon
so has part: feature:5999160-5999270:-1:exon
so has part: feature:5985322-5985450:-1:exon
so has part: feature:5983644-5983785:-1:exon
so has part: feature:5983023-5983128:-1:exon

XP_004599074.1
type: Protein
SIO_000068: ncbiprotein

position:5983023:-1
position: 5983023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6008815-6008879:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6005131-6005240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6000187-6000246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5999160-5999270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5985322-5985450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5983644-5983785:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5983023-5983128:-1:exon

DNAJB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: DNAJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily B member 6 isoform X3
translation: MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPEDVFREFFGGRDPFSFDFFEDPLEDFFGSRRGPRGNRSRGPGLFFSAFSGFPAFGGGFPAFDTGFTSFGSLGHGGITSFSSSSFGGSGMGNFKSVSTSTKIVNGRKITTKRIVENGQERVEIEEDGQLKSLTINGKEQPLRLDNK
SIO_010081: DNAJB6
subclass of: SO_0000673
so part of: DNAJB6
location: complement(join(5983023..5983128,5983644..5983785,5985322..5985453,5999160..5999270,6000187..6000246,6005131..6005240,6008815..6008879))
location: region:5983023-6008879:-1
so has part: feature:6008815-6008879:-1:exon
so has part: feature:6005131-6005240:-1:exon
so has part: feature:6000187-6000246:-1:exon
so has part: feature:5999160-5999270:-1:exon
so has part: feature:5985322-5985453:-1:exon
so has part: feature:5983644-5983785:-1:exon
so has part: feature:5983023-5983128:-1:exon

XP_012786355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6008815-6008879:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6005131-6005240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6000187-6000246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5999160-5999270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5985322-5985453:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5983644-5983785:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5983023-5983128:-1:exon

DNAJB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: DNAJB6
product: DnaJ heat shock protein family (Hsp40) member B6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004599016.3
SIO_010081: DNAJB6
subclass of: SO_0000673
so part of: DNAJB6
location: complement(join(5995634..5995970,5996937..5997041,5999160..5999270,6000187..6000246,6005131..6005240,6008815..6008905,6040918..6041124,6045290..6045473))
location: region:5995634-6045473:-1
so has part: feature:6045290-6045473:-1:exon
so has part: feature:6040918-6041124:-1:exon
so has part: feature:6008815-6008905:-1:exon
so has part: feature:6005131-6005240:-1:exon
so has part: feature:6000187-6000246:-1:exon
so has part: feature:5999160-5999270:-1:exon
so has part: feature:5996937-5997041:-1:exon
so has part: feature:5995634-5995970:-1:exon

position:5995634:-1
position: 5995634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6045290-6045473:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6040918-6041124:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6008815-6008905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6005131-6005240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6000187-6000246:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5999160-5999270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5996937-5997041:-1:exon

position:5996937:-1
position: 5996937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5997041:-1
position: 5997041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5995634-5995970:-1:exon

position:5995970:-1
position: 5995970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DNAJB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: DNAJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily B member 6 isoform X2
translation: MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPEDVFREFFGGRDPFSFDFFGVLGDFHFQAVRICTQEKKLLHGYYVYEVTVQPAGGFEEMASDDLEPSEELDQPVYEETVEDIPSEENSEVLDVVTSEELDVFSEDEPSEGYSRDQGELLSEDLELISSEDEASPGDVEELSEECEELLSEEEHSGPELEALLVQQ
SIO_010081: DNAJB6
subclass of: SO_0000673
so part of: DNAJB6
location: complement(join(5995636..5995970,5996937..5997041,5999160..5999270,6000187..6000246,6005131..6005240,6008815..6008879))
location: region:5995636-6008879:-1
so has part: feature:6008815-6008879:-1:exon
so has part: feature:6005131-6005240:-1:exon
so has part: feature:6000187-6000246:-1:exon
so has part: feature:5999160-5999270:-1:exon
so has part: feature:5996937-5997041:-1:exon
so has part: feature:5995636-5995970:-1:exon

XP_004599073.1
type: Protein
SIO_000068: ncbiprotein

position:5995636:-1
position: 5995636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6008815-6008879:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6005131-6005240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6000187-6000246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5999160-5999270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5996937-5997041:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5995636-5995970:-1:exon

PRRC2C
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PRRC2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6171887..6261679)
location: region:6171887-6261679:-1
so has part: feature:6171887-6261679:-1:exon
subclass of: SO_0000010

101534261
type: Gene
SIO_000068: ncbigene

position:6171887:-1
position: 6171887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6261679:-1
position: 6261679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6171887-6261679:-1:exon

PRRC2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PRRC2C
product: proline rich coiled-coil 2C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 1 Protein, and 60% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930096.2
SIO_010081: PRRC2C
subclass of: SO_0000673
so part of: PRRC2C
location: complement(join(6171887..6171898,6173404..6173640,6174407..6174533,6174902..6175005,6175333..6175551,6176576..6176683,6177379..6177610,6183529..6183665,6183965..6184077,6184630..6184833,6195000..6195201,6199203..6199304,6202073..6202201,6207940..6208022,6208290..6209061,6210146..6210300,6211053..6211261,6212363..6214591,6215560..6215770,6217071..6217335,6217549..6217716,6224062..6224115,6225819..6225960,6227250..6227337,6227418..6227551,6228129..6228211,6231913..6232133,6234194..6234319,6235378..6235487,6237043..6237220,6238572..6238750,6261618..6261679))
location: region:6171887-6261679:-1
so has part: feature:6261618-6261679:-1:exon
so has part: feature:6238572-6238750:-1:exon
so has part: feature:6237043-6237220:-1:exon
so has part: feature:6235378-6235487:-1:exon
so has part: feature:6234194-6234319:-1:exon
so has part: feature:6231913-6232133:-1:exon
so has part: feature:6228129-6228211:-1:exon
so has part: feature:6227418-6227551:-1:exon
so has part: feature:6227250-6227337:-1:exon
so has part: feature:6225819-6225960:-1:exon
so has part: feature:6224062-6224115:-1:exon
so has part: feature:6217549-6217716:-1:exon
so has part: feature:6217071-6217335:-1:exon
so has part: feature:6215560-6215770:-1:exon
so has part: feature:6212363-6214591:-1:exon
so has part: feature:6211053-6211261:-1:exon
so has part: feature:6210146-6210300:-1:exon
so has part: feature:6208290-6209061:-1:exon
so has part: feature:6207940-6208022:-1:exon
so has part: feature:6202073-6202201:-1:exon
so has part: feature:6199203-6199304:-1:exon
so has part: feature:6195000-6195201:-1:exon
so has part: feature:6184630-6184833:-1:exon
so has part: feature:6183965-6184077:-1:exon
so has part: feature:6183529-6183665:-1:exon
so has part: feature:6177379-6177610:-1:exon
so has part: feature:6176576-6176683:-1:exon
so has part: feature:6175333-6175551:-1:exon
so has part: feature:6174902-6175005:-1:exon
so has part: feature:6174407-6174533:-1:exon
so has part: feature:6173404-6173640:-1:exon
so has part: feature:6171887-6171898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6261618-6261679:-1:exon

position:6261618:-1
position: 6261618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6238572-6238750:-1:exon

position:6238572:-1
position: 6238572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6238750:-1
position: 6238750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6237043-6237220:-1:exon

position:6237043:-1
position: 6237043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6237220:-1
position: 6237220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6235378-6235487:-1:exon

position:6235378:-1
position: 6235378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6235487:-1
position: 6235487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6234194-6234319:-1:exon

position:6234194:-1
position: 6234194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6234319:-1
position: 6234319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6231913-6232133:-1:exon

position:6231913:-1
position: 6231913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6232133:-1
position: 6232133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6228129-6228211:-1:exon

position:6228129:-1
position: 6228129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6228211:-1
position: 6228211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6227418-6227551:-1:exon

position:6227418:-1
position: 6227418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6227551:-1
position: 6227551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6227250-6227337:-1:exon

position:6227250:-1
position: 6227250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6227337:-1
position: 6227337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6225819-6225960:-1:exon

position:6225819:-1
position: 6225819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6225960:-1
position: 6225960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6224062-6224115:-1:exon

position:6224062:-1
position: 6224062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6224115:-1
position: 6224115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6217549-6217716:-1:exon

position:6217549:-1
position: 6217549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6217716:-1
position: 6217716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6217071-6217335:-1:exon

position:6217071:-1
position: 6217071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6217335:-1
position: 6217335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6215560-6215770:-1:exon

position:6215560:-1
position: 6215560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6215770:-1
position: 6215770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6212363-6214591:-1:exon

position:6212363:-1
position: 6212363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6214591:-1
position: 6214591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6211053-6211261:-1:exon

position:6211053:-1
position: 6211053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6211261:-1
position: 6211261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6210146-6210300:-1:exon

position:6210146:-1
position: 6210146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6210300:-1
position: 6210300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6208290-6209061:-1:exon

position:6208290:-1
position: 6208290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6209061:-1
position: 6209061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6207940-6208022:-1:exon

position:6207940:-1
position: 6207940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6208022:-1
position: 6208022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6202073-6202201:-1:exon

position:6202073:-1
position: 6202073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6202201:-1
position: 6202201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6199203-6199304:-1:exon

position:6199203:-1
position: 6199203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6199304:-1
position: 6199304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6195000-6195201:-1:exon

position:6195000:-1
position: 6195000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6195201:-1
position: 6195201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6184630-6184833:-1:exon

position:6184630:-1
position: 6184630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6184833:-1
position: 6184833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6183965-6184077:-1:exon

position:6183965:-1
position: 6183965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6184077:-1
position: 6184077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6183529-6183665:-1:exon

position:6183529:-1
position: 6183529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6183665:-1
position: 6183665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:6177379-6177610:-1:exon

position:6177379:-1
position: 6177379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6177610:-1
position: 6177610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:6176576-6176683:-1:exon

position:6176576:-1
position: 6176576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6176683:-1
position: 6176683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:6175333-6175551:-1:exon

position:6175333:-1
position: 6175333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6175551:-1
position: 6175551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:6174902-6175005:-1:exon

position:6174902:-1
position: 6174902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6175005:-1
position: 6175005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:6174407-6174533:-1:exon

position:6174407:-1
position: 6174407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6174533:-1
position: 6174533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:6173404-6173640:-1:exon

position:6173404:-1
position: 6173404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6173640:-1
position: 6173640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:6171887-6171898:-1:exon

position:6171898:-1
position: 6171898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRRC2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PRRC2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein PRRC2C
translation: MSEKSGQSTKAKDGKKYATLSLFNTYKGKSLETQKTTVAARHGLQSLGKVGISRRMPPPANLPSLKAENKGNDPNVNIVPKDGSGWASKQEPHEEEKMPEVPPAQPKPGVAAPPEVAPAPKSWASNKQGGQGDGIQVNSQFQQEFPSLQAAGDQEKKEKESNDDSYGPGPSLRPPNVACWRDGGKSAGSPSSDQDEKLPGQDDSTNGTSEQSDILKVVEKRIACGPPQAKLNGQPGGLPSQYRAMMPPYMFQQYPRMAYPPLHGPMRFPPSLSETNKGLRGRGPPPSWASEPERPSILSASELKELDKFDNLDAEADEGWAGAQMEVDYTEQLNFSDDDEQGSSSPKENSSEEQGSKSSENTENRKEADEGCSPKPSQAAAQLPATKGSYGKAPPSNQERGLSSHLPPPPKLLAQQEEPLLSKQSSSRSEKEPAPVAHEAEAESGSQPRPAVLPGHFKQFQKSLPPRFQRQQEQMKQQQWQQQQQQQQQQQGVLPQTVSSQPSSGAVPPPAHRPLYQAMQPHPQHLASMGFDPRWLMMQSYMDPRMMSGRPAMDIAPIHPGMIPPKPLMRRDQMEGSANNSESFEHMARSPRDHATSLSEPRVMWGSEPYPQAEPPQGSPPTAAGETESGRPEAPPDPEQITAVYPGEHSHSESHPKADFVGESNETETQKSLSRSVEDIRLHHTDASDQSVDPKTLSTPPEDRVSAVESQPTRKRSVSHGSNHTQKPEEQRSEPSVSIPKASNRCIDSKEPAERPEDKPRKEGFIRSSEGPKPEKLYKSKSETRWGPRPNSSRREEGIDRPVRRSGPIKKPVLRDMKEERELRKEKEGEKVEKGLEKVIKVEKTEKKDLPPPLPPAPVQPQSVTPPTQPEPEKCSSTEISASTQKASQDIEKPLEPVSSVQVEPAVKTVNQQNAAPVVREEKQPEKIVSKEAVVERPRPDSRPVVRKESALPPRTYWKEARERDWFPDQGYRGRGRGEYYSRGRSYRGSYGGRGRGGRGHTRDYPPYRDSKSRTEHVPSGPLRPREESETRSESSDFEIVPKRRRQRGSETDTDSEVHESASDKDSLSKGKLPKREERSENKKPIKPPQSSFKPESNVRLDNRLPEKPCVREDDKSKPSFLPKGEPTRRGRGGTFRRGGRDPGARPSRPSTLRRPAYRDNQWNPRQAEAPKPEDGEQPRRHEQFIPIPADKRPPKFDRKFDPARERPRRQRPTRPPRQDKPPRFRRLREKEAASKTNDRSVSTSGTVSNAVLEPVNTTGDTSGTKTPDLSNQNSSDQANEEWETASESSDFNERRERDEKKNADLIAQAIVKAGDNGLPPKREIAKRSFSSQRPGVDRQNRRGNSGPPKSGRNFSGPRNEKRSGPPSKSGKKGPFDDQSASNAGVDSVNGGSSHHQEGTVNGTGQKNSKESTGKKREDPKPGPKKPKEKVDALSQFDLNNYASVVIIDDHPEVTVVEDPQSNLNDDGFTEVVSKKQQKRLQDEERRKKEEQVIQVWNKKNANEKGRSQTSKLPPRFAKKQVAGTQQVPSPASAPVPAPTVVPTPVSPAAPTPASTSAPVLTSTSSPVPASVSVPASTSATATATATVSSSAPASVSAPAPTTILASTSAPAPIPILTSASVPMLASALAPTSASTTLSTPPLPAITTPAPVSAPTASVSLTPASSSAQASTTPAQTQTQTHRPTQNPVQTTQSSKQPPPSLRLPSAQTPNGTDHVNPGKSIQTAQSHGALAAELWDNKVAPPAVLNDISKKLGPISPPQPPSVSAWNKPLTSFGSTSSEIRFETYFSITAPQESVTDYTTPSSLPNTVATNTAKMEDTLVNNVPLPNTLPLPKRETIQQSSSLTSVPPTTFSLTFKMESARKAWENSPNVREKGSPVTSAAPPIASGVSSSASGPSTATYNSFSSASMAQIPVASVTPTTSLSGAGTYTTSSLSTKSATTSDPPNICKVKPQQLQTSTLPSASHFSQLSCMPSLIAQQQQSPQVYVSQSAAAQIPAFYM…
SIO_010081: PRRC2C
subclass of: SO_0000673
so part of: PRRC2C
location: complement(join(6171887..6171898,6173404..6173640,6174407..6174533,6174902..6175005,6175333..6175551,6176576..6176683,6177379..6177610,6183529..6183665,6183965..6184077,6184630..6184833,6195000..6195201,6199203..6199304,6202073..6202201,6207940..6208022,6208290..6209061,6210146..6210300,6211053..6211261,6212363..6214591,6215560..6215770,6217071..6217335,6217549..6217716,6224062..6224115,6225819..6225960,6227250..6227337,6227418..6227551,6228129..6228211,6231913..6232133,6234194..6234319,6235378..6235487,6237043..6237220,6238572..6238683))
location: region:6171887-6238683:-1
so has part: feature:6238572-6238683:-1:exon
so has part: feature:6237043-6237220:-1:exon
so has part: feature:6235378-6235487:-1:exon
so has part: feature:6234194-6234319:-1:exon
so has part: feature:6231913-6232133:-1:exon
so has part: feature:6228129-6228211:-1:exon
so has part: feature:6227418-6227551:-1:exon
so has part: feature:6227250-6227337:-1:exon
so has part: feature:6225819-6225960:-1:exon
so has part: feature:6224062-6224115:-1:exon
so has part: feature:6217549-6217716:-1:exon
so has part: feature:6217071-6217335:-1:exon
so has part: feature:6215560-6215770:-1:exon
so has part: feature:6212363-6214591:-1:exon
so has part: feature:6211053-6211261:-1:exon
so has part: feature:6210146-6210300:-1:exon
so has part: feature:6208290-6209061:-1:exon
so has part: feature:6207940-6208022:-1:exon
so has part: feature:6202073-6202201:-1:exon
so has part: feature:6199203-6199304:-1:exon
so has part: feature:6195000-6195201:-1:exon
so has part: feature:6184630-6184833:-1:exon
so has part: feature:6183965-6184077:-1:exon
so has part: feature:6183529-6183665:-1:exon
so has part: feature:6177379-6177610:-1:exon
so has part: feature:6176576-6176683:-1:exon
so has part: feature:6175333-6175551:-1:exon
so has part: feature:6174902-6175005:-1:exon
so has part: feature:6174407-6174533:-1:exon
so has part: feature:6173404-6173640:-1:exon
so has part: feature:6171887-6171898:-1:exon

XP_012785550.2
type: Protein
SIO_000068: ncbiprotein

position:6238683:-1
position: 6238683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6238572-6238683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6237043-6237220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6235378-6235487:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6234194-6234319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6231913-6232133:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6228129-6228211:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6227418-6227551:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6227250-6227337:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6225819-6225960:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6224062-6224115:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6217549-6217716:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6217071-6217335:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6215560-6215770:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6212363-6214591:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6211053-6211261:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6210146-6210300:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6208290-6209061:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6207940-6208022:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6202073-6202201:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6199203-6199304:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6195000-6195201:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6184630-6184833:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6183965-6184077:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6183529-6183665:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6177379-6177610:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6176576-6176683:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6175333-6175551:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6174902-6175005:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6174407-6174533:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6173404-6173640:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6171887-6171898:-1:exon

MYOC
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: MYOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6325822..6333915)
location: region:6325822-6333915:-1
so has part: feature:6325822-6333915:-1:exon
subclass of: SO_0000010

101529642
type: Gene
SIO_000068: ncbigene

position:6325822:-1
position: 6325822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6333915:-1
position: 6333915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6325822-6333915:-1:exon

MYOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MYOC
product: myocilin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_004596292.3
SIO_010081: MYOC
subclass of: SO_0000673
so part of: MYOC
location: complement(join(6325822..6326606,6328384..6328512,6333354..6333915))
location: region:6325822-6333915:-1
so has part: feature:6333354-6333915:-1:exon
so has part: feature:6328384-6328512:-1:exon
so has part: feature:6325822-6326606:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6333354-6333915:-1:exon

position:6333354:-1
position: 6333354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6328384-6328512:-1:exon

position:6328384:-1
position: 6328384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6328512:-1
position: 6328512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6325822-6326606:-1:exon

position:6326606:-1
position: 6326606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MYOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MYOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocilin
translation: MPAVQLLLLACLGWGVGARTAQLRKANDRSGRCQYTFTVASPNESSCPEQGQAMSAIQDLQRDSSTQRADLESTKARLSSLESILQRMTMQQTDGPQETRESLQEELDAVRRERDQLESQSRELEAAYSNLLQEKSALEEEKQRLVRENADLAGRWESSSQEVARLIRGQCPQTRDTSQEVTPGSREASQWNLDTLAFQELKSELTEVPASRILKESHPPVRSEGEDRDRGCGELVWVGQPVTLRTAETITGKYGVWMRDPKPTFPHTQETTWRIDTVGTDIHQVFEYELISQFVQGYPSKVYVLPRSLESTGAVVYGGSLYFQGADSRIVIRFELNTETVKAEKEIPAAGYHGQFPYSWGGYTDIDLAVDETGLWVIYSTEDAKGAIVLSKLNPENLALEQTWETNIRKQSVANAFIICGTLYTVSSYSSADATINFAYDTSTGNSKPLAIPFQNRYKYSSMVDYNPLEKKLFAWDNFNMVTYDIKLSRM
SIO_010081: MYOC
subclass of: SO_0000673
so part of: MYOC
location: complement(join(6325822..6326606,6328384..6328512,6333354..6333915))
location: region:6325822-6333915:-1
so has part: feature:6333354-6333915:-1:exon
so has part: feature:6328384-6328512:-1:exon
so has part: feature:6325822-6326606:-1:exon

XP_004596349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6333354-6333915:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6328384-6328512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6325822-6326606:-1:exon

VAMP4
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: VAMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6370001..6395743)
location: region:6370001-6395743:-1
so has part: feature:6370001-6395743:-1:exon
subclass of: SO_0000010

101529403
type: Gene
SIO_000068: ncbigene

position:6370001:-1
position: 6370001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6395743:-1
position: 6395743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6370001-6395743:-1:exon

VAMP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: VAMP4
product: vesicle associated membrane protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012930098.1
SIO_010081: VAMP4
subclass of: SO_0000673
so part of: VAMP4
location: complement(join(6370001..6371911,6373048..6373099,6377798..6377877,6378752..6378852,6382402..6382452,6388484..6388530,6395662..6395743))
location: region:6370001-6395743:-1
so has part: feature:6395662-6395743:-1:exon
so has part: feature:6388484-6388530:-1:exon
so has part: feature:6382402-6382452:-1:exon
so has part: feature:6378752-6378852:-1:exon
so has part: feature:6377798-6377877:-1:exon
so has part: feature:6373048-6373099:-1:exon
so has part: feature:6370001-6371911:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6395662-6395743:-1:exon

position:6395662:-1
position: 6395662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6388484-6388530:-1:exon

position:6388484:-1
position: 6388484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6388530:-1
position: 6388530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6382402-6382452:-1:exon

position:6382402:-1
position: 6382402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6382452:-1
position: 6382452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6378752-6378852:-1:exon

position:6378752:-1
position: 6378752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6378852:-1
position: 6378852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6377798-6377877:-1:exon

position:6377798:-1
position: 6377798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6377877:-1
position: 6377877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6373048-6373099:-1:exon

position:6373048:-1
position: 6373048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6373099:-1
position: 6373099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6370001-6371911:-1:exon

position:6371911:-1
position: 6371911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VAMP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: VAMP4
product: vesicle associated membrane protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004596291.2
SIO_010081: VAMP4
subclass of: SO_0000673
so part of: VAMP4
location: complement(join(6370001..6371911,6373048..6373094,6375735..6375739,6377798..6377877,6378752..6378852,6382402..6382452,6388484..6388530,6395662..6395743))
location: region:6370001-6395743:-1
so has part: feature:6395662-6395743:-1:exon
so has part: feature:6388484-6388530:-1:exon
so has part: feature:6382402-6382452:-1:exon
so has part: feature:6378752-6378852:-1:exon
so has part: feature:6377798-6377877:-1:exon
so has part: feature:6375735-6375739:-1:exon
so has part: feature:6373048-6373094:-1:exon
so has part: feature:6370001-6371911:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6395662-6395743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6388484-6388530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6382402-6382452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6378752-6378852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6377798-6377877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6375735-6375739:-1:exon

position:6375735:-1
position: 6375735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6375739:-1
position: 6375739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6373048-6373094:-1:exon

position:6373094:-1
position: 6373094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6370001-6371911:-1:exon

VAMP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: VAMP4
product: vesicle associated membrane protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930099.1
SIO_010081: VAMP4
subclass of: SO_0000673
so part of: VAMP4
location: complement(join(6370001..6371911,6373048..6373099,6377798..6377877,6378752..6378852,6382402..6382449,6388484..6388530,6395662..6395727))
location: region:6370001-6395727:-1
so has part: feature:6395662-6395727:-1:exon
so has part: feature:6388484-6388530:-1:exon
so has part: feature:6382402-6382449:-1:exon
so has part: feature:6378752-6378852:-1:exon
so has part: feature:6377798-6377877:-1:exon
so has part: feature:6373048-6373099:-1:exon
so has part: feature:6370001-6371911:-1:exon

position:6395727:-1
position: 6395727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6395662-6395727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6388484-6388530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6382402-6382449:-1:exon

position:6382449:-1
position: 6382449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6378752-6378852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6377798-6377877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6373048-6373099:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6370001-6371911:-1:exon

VAMP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: VAMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-associated membrane protein 4 isoform X4
translation: MPPKFKRHLNDDDVTGSVKSERRNLLEDDSDEEEDFFLGPSGPRFGPRSDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWWRGCKVRAIMALAAVILLLVIIILIVVKYRA
SIO_010081: VAMP4
subclass of: SO_0000673
so part of: VAMP4
location: complement(join(6371883..6371911,6373048..6373099,6377798..6377877,6378752..6378852,6382402..6382449,6388484..6388530,6395662..6395727))
location: region:6371883-6395727:-1
so has part: feature:6395662-6395727:-1:exon
so has part: feature:6388484-6388530:-1:exon
so has part: feature:6382402-6382449:-1:exon
so has part: feature:6378752-6378852:-1:exon
so has part: feature:6377798-6377877:-1:exon
so has part: feature:6373048-6373099:-1:exon
so has part: feature:6371883-6371911:-1:exon

XP_012785553.1
type: Protein
SIO_000068: ncbiprotein

position:6371883:-1
position: 6371883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6395662-6395727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6388484-6388530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6382402-6382449:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6378752-6378852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6377798-6377877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6373048-6373099:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6371883-6371911:-1:exon

VAMP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: VAMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-associated membrane protein 4 isoform X2
translation: MPPKFKRHLNDDDVTGSVKSERRNLLEDDSDEEEDFFLRGPSGPRFGPRSDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWWRGCKVRAIMALAAVILLLVIIILIVVKYRA
SIO_010081: VAMP4
subclass of: SO_0000673
so part of: VAMP4
location: complement(join(6371883..6371911,6373048..6373099,6377798..6377877,6378752..6378852,6382402..6382452,6388484..6388530,6395662..6395727))
location: region:6371883-6395727:-1
so has part: feature:6395662-6395727:-1:exon
so has part: feature:6388484-6388530:-1:exon
so has part: feature:6382402-6382452:-1:exon
so has part: feature:6378752-6378852:-1:exon
so has part: feature:6377798-6377877:-1:exon
so has part: feature:6373048-6373099:-1:exon
so has part: feature:6371883-6371911:-1:exon

XP_012785552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6395662-6395727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6388484-6388530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6382402-6382452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6378752-6378852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6377798-6377877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6373048-6373099:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6371883-6371911:-1:exon

VAMP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: VAMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-associated membrane protein 4 isoform X3
translation: MPPKFKRHLNDDDVTGSVKSERRNLLEDDSDEEEDFFLRGPSGPRFGPRSDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWWRGCKIKAIMALAAVILLLVIIILIVVKYRA
SIO_010081: VAMP4
subclass of: SO_0000673
so part of: VAMP4
location: complement(join(6371883..6371911,6373048..6373094,6375735..6375739,6377798..6377877,6378752..6378852,6382402..6382452,6388484..6388530,6395662..6395727))
location: region:6371883-6395727:-1
so has part: feature:6395662-6395727:-1:exon
so has part: feature:6388484-6388530:-1:exon
so has part: feature:6382402-6382452:-1:exon
so has part: feature:6378752-6378852:-1:exon
so has part: feature:6377798-6377877:-1:exon
so has part: feature:6375735-6375739:-1:exon
so has part: feature:6373048-6373094:-1:exon
so has part: feature:6371883-6371911:-1:exon

XP_004596348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6395662-6395727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6388484-6388530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6382402-6382452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6378752-6378852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6377798-6377877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6375735-6375739:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6373048-6373094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6371883-6371911:-1:exon

VAMP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: VAMP4
product: vesicle associated membrane protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012930097.1
SIO_010081: VAMP4
subclass of: SO_0000673
so part of: VAMP4
location: complement(join(6372579..6372705,6373048..6373099,6377798..6377877,6378752..6378852,6382402..6382452,6388484..6388530,6395662..6395743))
location: region:6372579-6395743:-1
so has part: feature:6395662-6395743:-1:exon
so has part: feature:6388484-6388530:-1:exon
so has part: feature:6382402-6382452:-1:exon
so has part: feature:6378752-6378852:-1:exon
so has part: feature:6377798-6377877:-1:exon
so has part: feature:6373048-6373099:-1:exon
so has part: feature:6372579-6372705:-1:exon

position:6372579:-1
position: 6372579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6395662-6395743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6388484-6388530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6382402-6382452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6378752-6378852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6377798-6377877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6373048-6373099:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6372579-6372705:-1:exon

position:6372705:-1
position: 6372705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VAMP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: VAMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-associated membrane protein 4 isoform X1
translation: MPPKFKRHLNDDDVTGSVKSERRNLLEDDSDEEEDFFLRGPSGPRFGPRSDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMWWRGCKVRAIMALAAVILLLVIIKRRSVPVDWRGGLGRC
SIO_010081: VAMP4
subclass of: SO_0000673
so part of: VAMP4
location: complement(join(6372656..6372705,6373048..6373099,6377798..6377877,6378752..6378852,6382402..6382452,6388484..6388530,6395662..6395727))
location: region:6372656-6395727:-1
so has part: feature:6395662-6395727:-1:exon
so has part: feature:6388484-6388530:-1:exon
so has part: feature:6382402-6382452:-1:exon
so has part: feature:6378752-6378852:-1:exon
so has part: feature:6377798-6377877:-1:exon
so has part: feature:6373048-6373099:-1:exon
so has part: feature:6372656-6372705:-1:exon

XP_012785551.1
type: Protein
SIO_000068: ncbiprotein

position:6372656:-1
position: 6372656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6395662-6395727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6388484-6388530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6382402-6382452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6378752-6378852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6377798-6377877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6373048-6373099:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6372656-6372705:-1:exon

EEF1AKNMT
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: EEF1AKNMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6406265..6418868
location: region:6406265-6418868:1
so has part: feature:6406265-6418868:1:exon
subclass of: SO_0000010

101528989
type: Gene
SIO_000068: ncbigene

position:6406265:1
position: 6406265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6418868:1
position: 6418868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6406265-6418868:1:exon

EEF1AKNMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: EEF1AKNMT
product: eEF1A lysine and N-terminal methyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 6 Proteins
transcript id: XM_004596289.1
SIO_010081: EEF1AKNMT
subclass of: SO_0000673
so part of: EEF1AKNMT
location: join(6406265..6406471,6408530..6409289,6410493..6410692,6411922..6412117,6412847..6413014,6414618..6414833,6416817..6416948,6418444..6418868)
location: region:6406265-6418868:1
so has part: feature:6406265-6406471:1:exon
so has part: feature:6408530-6409289:1:exon
so has part: feature:6410493-6410692:1:exon
so has part: feature:6411922-6412117:1:exon
so has part: feature:6412847-6413014:1:exon
so has part: feature:6414618-6414833:1:exon
so has part: feature:6416817-6416948:1:exon
so has part: feature:6418444-6418868:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6406265-6406471:1:exon

position:6406471:1
position: 6406471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6408530-6409289:1:exon

position:6408530:1
position: 6408530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6409289:1
position: 6409289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6410493-6410692:1:exon

position:6410493:1
position: 6410493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6410692:1
position: 6410692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6411922-6412117:1:exon

position:6411922:1
position: 6411922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6412117:1
position: 6412117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6412847-6413014:1:exon

position:6412847:1
position: 6412847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6413014:1
position: 6413014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6414618-6414833:1:exon

position:6414618:1
position: 6414618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6414833:1
position: 6414833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6416817-6416948:1:exon

position:6416817:1
position: 6416817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6416948:1
position: 6416948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6418444-6418868:1:exon

position:6418444:1
position: 6418444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EEF1AKNMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: EEF1AKNMT
product: eEF1A lysine and N-terminal methyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein
transcript id: XM_004596290.1
SIO_010081: EEF1AKNMT
subclass of: SO_0000673
so part of: EEF1AKNMT
location: join(6406319..6406471,6408530..6408829,6408922,6410502..6410692,6411922..6412117,6412847..6413014,6414618..6414833,6416817..6416948,6418444..6418718)
location: region:6406319-6418718:1
so has part: feature:6406319-6406471:1:exon
so has part: feature:6408530-6408829:1:exon
so has part: feature:6408922-6408922:1:exon
so has part: feature:6410502-6410692:1:exon
so has part: feature:6411922-6412117:1:exon
so has part: feature:6412847-6413014:1:exon
so has part: feature:6414618-6414833:1:exon
so has part: feature:6416817-6416948:1:exon
so has part: feature:6418444-6418718:1:exon

position:6406319:1
position: 6406319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6418718:1
position: 6418718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6406319-6406471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6408530-6408829:1:exon

position:6408829:1
position: 6408829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6408922-6408922:1:exon

position:6408922:1
position: 6408922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6410502-6410692:1:exon

position:6410502:1
position: 6410502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6411922-6412117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6412847-6413014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6414618-6414833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6416817-6416948:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6418444-6418718:1:exon

EEF1AKNMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: EEF1AKNMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eEF1A lysine and N-terminal methyltransferase isoform X1
translation: MNLLPKSSKEFGSVDYWEKFFQQRGKKAFEWYGTYLELCGVLHKYIKPREKVLVIGCGNSELSEQLYDVGYQDIVSIDISESAIKQMRERNATRRPQLSFLKMDMTQMDFPSASFQVVLDKGTLDAVLTDEGEKTLQQVDRMLAEVGRVLQVGGRYLCISLAQAHILKKAVGYFSREGWMVRVHQLATSQDQVLEAEPRFSLPVFAFVMTKFRPVPGRTLQIFELCAQEQGKPTRLESAERLAEAVRERQQYAWLCGQLRRKAGLGNVSLDLCDGDTGEPRYTLHVVDSPTVKPSRDNHFAIFIIPQGRETEWLFGMEEGRKQLAASAGFRRLVTVALHRGQQYEGMESIQAELSARVLELAPAGMPAQQQVPFLSVGGDIGVRTVQHQDCSPLSGDYVVEDVQGDDRRYFRRLIFLSNRNVVQSEARLLQDVSLRVQKKRKKDRKKQRPADPAEDPSIAPGQSIDKSYLCCEHHKAMIAGLALLRNPELLLETPLALLVVGLGGGSLPLFVHDHFPKCCVDAVEIDPSMLEVATQWFGFSQSDRMKVHIADGLDYITSLAGAEVRPRYDVIMFDVDSKDPTLGMSCPPAAFVEQPFLQKVKSILSPEGVFILNLVCRDMGLKDSVLARLKAVFPLLYVRRIEDEVNEILFCQLHPERKLAMPELLEMAQALQRALRKPGQAWDDTYILSDMLKSVKIV
SIO_010081: EEF1AKNMT
subclass of: SO_0000673
so part of: EEF1AKNMT
location: join(6406319..6406471,6408530..6409289,6410493..6410692,6411922..6412117,6412847..6413014,6414618..6414833,6416817..6416948,6418444..6418718)
location: region:6406319-6418718:1
so has part: feature:6406319-6406471:1:exon
so has part: feature:6408530-6409289:1:exon
so has part: feature:6410493-6410692:1:exon
so has part: feature:6411922-6412117:1:exon
so has part: feature:6412847-6413014:1:exon
so has part: feature:6414618-6414833:1:exon
so has part: feature:6416817-6416948:1:exon
so has part: feature:6418444-6418718:1:exon

XP_004596346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6406319-6406471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6408530-6409289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6410493-6410692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6411922-6412117:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6412847-6413014:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6414618-6414833:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6416817-6416948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6418444-6418718:1:exon

EEF1AKNMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: EEF1AKNMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eEF1A lysine and N-terminal methyltransferase isoform X2
translation: MNLLPKSSKEFGSVDYWEKFFQQRGKKAFEWYGTYLELCGVLHKYIKPREKVLVIGCGNSELSEQLYDVGYQDIVSIDISESAIKQMRERNATRRPQLSFLKMDMTQMDFPSASFQVVLDKGTLDAVLTDEGEKTLQQVDRMLAEVGRVLQGRETEWLFGMEEGRKQLAASAGFRRLVTVALHRGQQYEGMESIQAELSARVLELAPAGMPAQQQVPFLSVGGDIGVRTVQHQDCSPLSGDYVVEDVQGDDRRYFRRLIFLSNRNVVQSEARLLQDVSLRVQKKRKKDRKKQRPADPAEDPSIAPGQSIDKSYLCCEHHKAMIAGLALLRNPELLLETPLALLVVGLGGGSLPLFVHDHFPKCCVDAVEIDPSMLEVATQWFGFSQSDRMKVHIADGLDYITSLAGAEVRPRYDVIMFDVDSKDPTLGMSCPPAAFVEQPFLQKVKSILSPEGVFILNLVCRDMGLKDSVLARLKAVFPLLYVRRIEDEVNEILFCQLHPERKLAMPELLEMAQALQRALRKPGQAWDDTYILSDMLKSVKIV
SIO_010081: EEF1AKNMT
subclass of: SO_0000673
so part of: EEF1AKNMT
location: join(6406319..6406471,6408530..6408829,6408922,6410502..6410692,6411922..6412117,6412847..6413014,6414618..6414833,6416817..6416948,6418444..6418718)
location: region:6406319-6418718:1
so has part: feature:6406319-6406471:1:exon
so has part: feature:6408530-6408829:1:exon
so has part: feature:6408922-6408922:1:exon
so has part: feature:6410502-6410692:1:exon
so has part: feature:6411922-6412117:1:exon
so has part: feature:6412847-6413014:1:exon
so has part: feature:6414618-6414833:1:exon
so has part: feature:6416817-6416948:1:exon
so has part: feature:6418444-6418718:1:exon

XP_004596347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6406319-6406471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6408530-6408829:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6408922-6408922:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6410502-6410692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6411922-6412117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6412847-6413014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6414618-6414833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6416817-6416948:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6418444-6418718:1:exon

DNM3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: DNM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6464965..7013265
location: region:6464965-7013265:1
so has part: feature:6464965-7013265:1:exon
subclass of: SO_0000010

101528744
type: Gene
SIO_000068: ncbigene

position:6464965:1
position: 6464965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7013265:1
position: 7013265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6464965-7013265:1:exon

DNM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: DNM3
product: dynamin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036497639.1
SIO_010081: DNM3
subclass of: SO_0000673
so part of: DNM3
location: join(6464965..6465125,6471098..6471103,6508448..6508459,6538628..6538644,6551040..6551066,6586277..6586291,6594877..6595026,6596028..6596231,6632821..6632919,6633690..6633850,6636872..6637014,6639172..6639307,6641507..6641574,6643757..6643895,6678412..6678498,6686350..6686420,6702845..6702896,6703662..6703691,6732753..6732866,6854380..6854489,6906451..6906562,6977905..6978069,6984906..6985132,6985667..6985903,7013126..7013265)
location: region:6464965-7013265:1
so has part: feature:6464965-6465125:1:exon
so has part: feature:6471098-6471103:1:exon
so has part: feature:6508448-6508459:1:exon
so has part: feature:6538628-6538644:1:exon
so has part: feature:6551040-6551066:1:exon
so has part: feature:6586277-6586291:1:exon
so has part: feature:6594877-6595026:1:exon
so has part: feature:6596028-6596231:1:exon
so has part: feature:6632821-6632919:1:exon
so has part: feature:6633690-6633850:1:exon
so has part: feature:6636872-6637014:1:exon
so has part: feature:6639172-6639307:1:exon
so has part: feature:6641507-6641574:1:exon
so has part: feature:6643757-6643895:1:exon
so has part: feature:6678412-6678498:1:exon
so has part: feature:6686350-6686420:1:exon
so has part: feature:6702845-6702896:1:exon
so has part: feature:6703662-6703691:1:exon
so has part: feature:6732753-6732866:1:exon
so has part: feature:6854380-6854489:1:exon
so has part: feature:6906451-6906562:1:exon
so has part: feature:6977905-6978069:1:exon
so has part: feature:6984906-6985132:1:exon
so has part: feature:6985667-6985903:1:exon
so has part: feature:7013126-7013265:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6464965-6465125:1:exon

position:6465125:1
position: 6465125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6471098-6471103:1:exon

position:6471098:1
position: 6471098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6471103:1
position: 6471103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6508448-6508459:1:exon

position:6508448:1
position: 6508448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6508459:1
position: 6508459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6538628-6538644:1:exon

position:6538628:1
position: 6538628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6538644:1
position: 6538644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6551040-6551066:1:exon

position:6551040:1
position: 6551040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6551066:1
position: 6551066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6586277-6586291:1:exon

position:6586277:1
position: 6586277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6586291:1
position: 6586291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6594877-6595026:1:exon

position:6594877:1
position: 6594877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6595026:1
position: 6595026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6596028-6596231:1:exon

position:6596028:1
position: 6596028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6596231:1
position: 6596231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6632821-6632919:1:exon

position:6632821:1
position: 6632821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6632919:1
position: 6632919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6633690-6633850:1:exon

position:6633690:1
position: 6633690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6633850:1
position: 6633850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6636872-6637014:1:exon

position:6636872:1
position: 6636872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6637014:1
position: 6637014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6639172-6639307:1:exon

position:6639172:1
position: 6639172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6639307:1
position: 6639307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6641507-6641574:1:exon

position:6641507:1
position: 6641507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6641574:1
position: 6641574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6643757-6643895:1:exon

position:6643757:1
position: 6643757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6643895:1
position: 6643895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6678412-6678498:1:exon

position:6678412:1
position: 6678412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6678498:1
position: 6678498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6686350-6686420:1:exon

position:6686350:1
position: 6686350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6686420:1
position: 6686420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6702845-6702896:1:exon

position:6702845:1
position: 6702845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6702896:1
position: 6702896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6703662-6703691:1:exon

position:6703662:1
position: 6703662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6703691:1
position: 6703691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6732753-6732866:1:exon

position:6732753:1
position: 6732753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6732866:1
position: 6732866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6854380-6854489:1:exon

position:6854380:1
position: 6854380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6854489:1
position: 6854489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6906451-6906562:1:exon

position:6906451:1
position: 6906451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6906562:1
position: 6906562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6977905-6978069:1:exon

position:6977905:1
position: 6977905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6978069:1
position: 6978069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6984906-6985132:1:exon

position:6984906:1
position: 6984906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6985132:1
position: 6985132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6985667-6985903:1:exon

position:6985667:1
position: 6985667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6985903:1
position: 6985903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7013126-7013265:1:exon

position:7013126:1
position: 7013126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: DNM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-3
translation: MGNREMEELIPLVNRLQDAFSALGQSCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGIGIVTRRPFSILVLIFSLTEYAEFLHCKGKKFTDFDEVRHEIEAETDRVTGVNKGISPIPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIREMIMQFITRENCLVLAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYVGVVNRSQKDIDGKKDIKAAMLAERKFFLSHPAYRHIADRMGTPHLQKVLNQQLTNHIRDTLPNFRNKLQGQLLSIEHEVEAYKNFKPEDPTRKTKALLQMVQQFAVDFEKRIEGSGDQVDTLELSGGAKINRIFHERFPFEIVKMEFNEKELRREISYAIKNIHGIRTGLFTPDMAFEAIVKKQIVKLKGPSLKSVDLVMQELINTVKKCTRKLANFPRLCEETERIVANHIREREGKTKDQVLLLIDIQVSYINTNHEDFIGFANAQQRSSQVHKKATIGNQGTNLPPSRQIVIRKGWLTISNIGIMKGGSKGYWFVLTAESLSWYKDDEEKEKKYMLPLDNLKVRDVEKSFMSSKHIFALFNTEQRNVYKDYRFLELACDSQEDVDSWKASLLRAGVYPDKSLAENDENGQAENFSMDPQLERQVETIRNLVDSYMSIINKCIRDLIPKTIMHLMINSVKDFINSELLAQLYSSEDQNTLMEESAEQAQRRDEMLRMYQALKEALVIIGDINTATVSTPAPPPVDDSWLQHSRRSPPLSPTNQRRPTLSAPLTRPASGRGPAPAIPSPGPHSGAPPVPFRPGPLPPFPNSSDSFGAPPQVPSRPTRAPPSVPRRPPPAVPGRPS
SIO_010081: DNM3
subclass of: SO_0000673
so part of: DNM3
location: join(6464965..6465125,6471098..6471103,6508448..6508459,6538628..6538644,6551040..6551066,6586277..6586291,6594877..6595026,6596028..6596231,6632821..6632919,6633690..6633850,6636872..6637014,6639172..6639307,6641507..6641574,6643757..6643895,6678412..6678498,6686350..6686420,6702845..6702896,6703662..6703691,6732753..6732866,6854380..6854489,6906451..6906562,6977905..6978069,6984906..6985132,6985667..6985903,7013126..7013162)
location: region:6464965-7013162:1
so has part: feature:6464965-6465125:1:exon
so has part: feature:6471098-6471103:1:exon
so has part: feature:6508448-6508459:1:exon
so has part: feature:6538628-6538644:1:exon
so has part: feature:6551040-6551066:1:exon
so has part: feature:6586277-6586291:1:exon
so has part: feature:6594877-6595026:1:exon
so has part: feature:6596028-6596231:1:exon
so has part: feature:6632821-6632919:1:exon
so has part: feature:6633690-6633850:1:exon
so has part: feature:6636872-6637014:1:exon
so has part: feature:6639172-6639307:1:exon
so has part: feature:6641507-6641574:1:exon
so has part: feature:6643757-6643895:1:exon
so has part: feature:6678412-6678498:1:exon
so has part: feature:6686350-6686420:1:exon
so has part: feature:6702845-6702896:1:exon
so has part: feature:6703662-6703691:1:exon
so has part: feature:6732753-6732866:1:exon
so has part: feature:6854380-6854489:1:exon
so has part: feature:6906451-6906562:1:exon
so has part: feature:6977905-6978069:1:exon
so has part: feature:6984906-6985132:1:exon
so has part: feature:6985667-6985903:1:exon
so has part: feature:7013126-7013162:1:exon

XP_036353532.1
type: Protein
SIO_000068: ncbiprotein

position:7013162:1
position: 7013162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6464965-6465125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6471098-6471103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6508448-6508459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6538628-6538644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6551040-6551066:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6586277-6586291:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6594877-6595026:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6596028-6596231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6632821-6632919:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6633690-6633850:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6636872-6637014:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6639172-6639307:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6641507-6641574:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6643757-6643895:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6678412-6678498:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6686350-6686420:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6702845-6702896:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6703662-6703691:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6732753-6732866:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6854380-6854489:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6906451-6906562:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6977905-6978069:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6984906-6985132:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6985667-6985903:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7013126-7013162:1:exon

PIGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PIGC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7027273..7029884)
location: region:7027273-7029884:-1
so has part: feature:7027273-7029884:-1:exon
subclass of: SO_0000010

101528509
type: Gene
SIO_000068: ncbigene

position:7027273:-1
position: 7027273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7029884:-1
position: 7029884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7027273-7029884:-1:exon

PIGC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PIGC
product: phosphatidylinositol glycan anchor biosynthesis class C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004596287.2
SIO_010081: PIGC
subclass of: SO_0000673
so part of: PIGC
location: complement(join(7027273..7028623,7029835..7029884))
location: region:7027273-7029884:-1
so has part: feature:7029835-7029884:-1:exon
so has part: feature:7027273-7028623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7029835-7029884:-1:exon

position:7029835:-1
position: 7029835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7027273-7028623:-1:exon

position:7028623:-1
position: 7028623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIGC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PIGC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol N-acetylglucosaminyltransferase subunit C
translation: MCAQPVTNTEEVRWQKVLYERQPFPDNYVDHRFLEELRKNIYARKYQYWAVVFESSVVVQQLCSVCVFVVIWWYMDEGLLAPHWLFGTGLASSLVGYILFDLVDGGEGRKKSGRTRWADLKSALVFITFTYGFSPVLKTLTESVSTDTIYAMAVFMLLGHLIFFDYGANAAIVSSTLSLNMAIFASVCLASRLPRSLHAFIMVTFAIQMFALWPMLQKKLKACTPRSYVGVTLLFALSALGGLLSISVVGAILFALLLVSISCLCPFYLIRLQLFKENIHGPWDEAEIKEDLSRFLS
SIO_010081: PIGC
subclass of: SO_0000673
so part of: PIGC
location: complement(7027536..7028429)
location: region:7027536-7028429:-1
so has part: feature:7027536-7028429:-1:exon

XP_004596344.1
type: Protein
SIO_000068: ncbiprotein

position:7027536:-1
position: 7027536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7028429:-1
position: 7028429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7027536-7028429:-1:exon

C13AH1orf105
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: C13AH1orf105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7028584..7052765
location: region:7028584-7052765:1
so has part: feature:7028584-7052765:1:exon
subclass of: SO_0000010

101534021
type: Gene
SIO_000068: ncbigene

position:7028584:1
position: 7028584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7052765:1
position: 7052765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7028584-7052765:1:exon

C13AH1orf105
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: C13AH1orf105
product: chromosome 13A C1orf105 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_012930095.1
SIO_010081: C13AH1orf105
subclass of: SO_0000673
so part of: C13AH1orf105
location: join(7028584..7028664,7030638..7030723,7033638..7033728,7046391..7046458,7049219..7049286,7052581..7052765)
location: region:7028584-7052765:1
so has part: feature:7028584-7028664:1:exon
so has part: feature:7030638-7030723:1:exon
so has part: feature:7033638-7033728:1:exon
so has part: feature:7046391-7046458:1:exon
so has part: feature:7049219-7049286:1:exon
so has part: feature:7052581-7052765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7028584-7028664:1:exon

position:7028664:1
position: 7028664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7030638-7030723:1:exon

position:7030638:1
position: 7030638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7030723:1
position: 7030723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7033638-7033728:1:exon

position:7033638:1
position: 7033638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7033728:1
position: 7033728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7046391-7046458:1:exon

position:7046391:1
position: 7046391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7046458:1
position: 7046458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7049219-7049286:1:exon

position:7049219:1
position: 7049219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7049286:1
position: 7049286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7052581-7052765:1:exon

position:7052581:1
position: 7052581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C13AH1orf105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: C13AH1orf105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf105 homolog
translation: MNFFSEAGQQSYVPRKRDTVNMPVKAEASVPKFDRVPWPSEASLLNKPLVLSIPGRSPRSLGAFLPASRKDGDLSAVFRVPDVLSKMQLRPVRIPDGLSVSFKNVGNHRTMNLHQSPTAACSKPSHDAMPTESLHYRLPMLGPRTAVFHRLLSATYQALQNVQQPSLLRKEPTVKTVRVNCSDRKRPHLAHL
SIO_010081: C13AH1orf105
subclass of: SO_0000673
so part of: C13AH1orf105
location: join(7028584..7028664,7030638..7030723,7033638..7033728,7046391..7046458,7049219..7049286,7052581..7052765)
location: region:7028584-7052765:1
so has part: feature:7028584-7028664:1:exon
so has part: feature:7030638-7030723:1:exon
so has part: feature:7033638-7033728:1:exon
so has part: feature:7046391-7046458:1:exon
so has part: feature:7049219-7049286:1:exon
so has part: feature:7052581-7052765:1:exon

XP_012785549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7028584-7028664:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7030638-7030723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7033638-7033728:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7046391-7046458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7049219-7049286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7052581-7052765:1:exon

SUCO
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SUCO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7055472..7211844
location: region:7055472-7211844:1
so has part: feature:7055472-7211844:1:exon
subclass of: SO_0000010

101533777
type: Gene
SIO_000068: ncbigene

position:7055472:1
position: 7055472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7211844:1
position: 7211844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7055472-7211844:1:exon

SUCO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SUCO
product: SUN domain containing ossification factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 49% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930094.1
SIO_010081: SUCO
subclass of: SO_0000673
so part of: SUCO
location: join(7055472..7055604,7141133..7141226,7145053..7145167,7146766..7146876,7155213..7155361,7157962..7158099,7161011..7161161,7164656..7164779,7165717..7165853,7166332..7166399,7169490..7169597,7170901..7171006,7172678..7172698,7172870..7172925,7173563..7173654,7185155..7185223,7185970..7186060,7188947..7190083,7191329..7191416,7195118..7195272,7195596..7195687,7210438..7210493,7211401..7211844)
location: region:7055472-7211844:1
so has part: feature:7055472-7055604:1:exon
so has part: feature:7141133-7141226:1:exon
so has part: feature:7145053-7145167:1:exon
so has part: feature:7146766-7146876:1:exon
so has part: feature:7155213-7155361:1:exon
so has part: feature:7157962-7158099:1:exon
so has part: feature:7161011-7161161:1:exon
so has part: feature:7164656-7164779:1:exon
so has part: feature:7165717-7165853:1:exon
so has part: feature:7166332-7166399:1:exon
so has part: feature:7169490-7169597:1:exon
so has part: feature:7170901-7171006:1:exon
so has part: feature:7172678-7172698:1:exon
so has part: feature:7172870-7172925:1:exon
so has part: feature:7173563-7173654:1:exon
so has part: feature:7185155-7185223:1:exon
so has part: feature:7185970-7186060:1:exon
so has part: feature:7188947-7190083:1:exon
so has part: feature:7191329-7191416:1:exon
so has part: feature:7195118-7195272:1:exon
so has part: feature:7195596-7195687:1:exon
so has part: feature:7210438-7210493:1:exon
so has part: feature:7211401-7211844:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7055472-7055604:1:exon

position:7055604:1
position: 7055604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7141133-7141226:1:exon

position:7141133:1
position: 7141133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7141226:1
position: 7141226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7145053-7145167:1:exon

position:7145053:1
position: 7145053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7145167:1
position: 7145167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7146766-7146876:1:exon

position:7146766:1
position: 7146766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7146876:1
position: 7146876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7155213-7155361:1:exon

position:7155213:1
position: 7155213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7155361:1
position: 7155361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7157962-7158099:1:exon

position:7157962:1
position: 7157962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7158099:1
position: 7158099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7161011-7161161:1:exon

position:7161011:1
position: 7161011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7161161:1
position: 7161161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7164656-7164779:1:exon

position:7164656:1
position: 7164656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7164779:1
position: 7164779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7165717-7165853:1:exon

position:7165717:1
position: 7165717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7165853:1
position: 7165853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7166332-7166399:1:exon

position:7166332:1
position: 7166332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7166399:1
position: 7166399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7169490-7169597:1:exon

position:7169490:1
position: 7169490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7169597:1
position: 7169597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7170901-7171006:1:exon

position:7170901:1
position: 7170901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7171006:1
position: 7171006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7172678-7172698:1:exon

position:7172678:1
position: 7172678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7172698:1
position: 7172698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7172870-7172925:1:exon

position:7172870:1
position: 7172870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7172925:1
position: 7172925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7173563-7173654:1:exon

position:7173563:1
position: 7173563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7173654:1
position: 7173654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7185155-7185223:1:exon

position:7185155:1
position: 7185155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7185223:1
position: 7185223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7185970-7186060:1:exon

position:7185970:1
position: 7185970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7186060:1
position: 7186060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7188947-7190083:1:exon

position:7188947:1
position: 7188947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7190083:1
position: 7190083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7191329-7191416:1:exon

position:7191329:1
position: 7191329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7191416:1
position: 7191416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7195118-7195272:1:exon

position:7195118:1
position: 7195118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7195272:1
position: 7195272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7195596-7195687:1:exon

position:7195596:1
position: 7195596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7195687:1
position: 7195687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7210438-7210493:1:exon

position:7210438:1
position: 7210438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7210493:1
position: 7210493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7211401-7211844:1:exon

position:7211401:1
position: 7211401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUCO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SUCO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SUN domain-containing ossification factor
translation: MTPLFLTVRAHRRPVRGPKLLEQLTVTLILPNVLNMFKNHSPLERFEEWMRQEKIRAKEKWKYEVARACRAFRVFVLPSWHVCCKESPSSSASTYYSQHDNCALENEGGQVQKKDEREGSINAELLGKSGSDLPIAPEENELKDDHVVDTQNTRKLSAPVVETLPAVGLHEDSSSVVVESENVENISSSSTSEITPVSKLDEIEKSGTIPVAKSSEADPSEAACEAREALELSAAAEQPAFVSTPGSLVGQHTENVSSSHDKGKIPKSKLESEVSGSEQADGTPKSALNASENLKNESSDYTESGEMDPTSVGNPKDPEDIPTFDEWKKKVMEVEKEKSLSAGQSMHPSPNGGPPAVKKVQKNRNNYASVECGAKILAANPEAKSTSAILIENMDLYMLNPCSTKIWFVIELCEPIQVKQLDIANYELFSSTPKDFLVSISDRYPTNKWVKLGTFHGRDERNVQSFPLDEQMYAKYVKMFIKYIKVDLVSHFGSEHFCPLSLIRVFGTSMVEEYEEIADSQYQSERQELFDEDYGAILNMVNIAANILGAKTEDLTEGNKSISENATATAAPKMPESAPGSTPVPAPEYVTPEAVQDPEPSADAPKESPIVQLVQEEEEEAGPSTVTLLGSGEQEDEAAPWFESETQTFCGDLTTVCCISSFSEYVYRRCSVGVTRYLQHSRVAVSKGEPLASAPPQLVLPEETVDVSETLSRESDSGSVDTEAETAVRGDFSGMHQGDSMNHTAQAIELEPSHSQTLSQSLFLDSTPEISSLSQIEVPESVKHETGHTPSQVILQESSVEVSSETEGKSESLSPLEKPSVPPEMKKGGEVTDGAVGADATYAVPSEPVAPPVPTATVPDSEGGEAGMNRADTPKLALTLGGESSSLPEVKEEEPSPEDALLRGLQRTATDFYAELQNSTDLGYANGNLVHGSNQKESVFMRLNNRIKALEVNMSLSGRYLEELSQRYRKQMEEMQKAFNKTIVKLQNTSRIAEEQVSDRQSYLVMSLVLCVVLGLMLCMQRCRNASPFDGDHIPKLPEGARYPSPKRCFSSYDDMSLKRRTSFPLIRSKSLQLTGREEDTNDLYIVEPLKFSPEKKKKRCKYKTEKIETIKPADPLHPVANGDIKGRKPFTNQRDFSNMGEVYHSSYKGPPSEGSSETSSQSEESYFCGISACTSLCNGQSQKTKTEKRALKRRRSKVQDQGKLIQTLIQTKSGSLPSLHDLIRGNKEITVGTLGVTAVSGHI
SIO_010081: SUCO
subclass of: SO_0000673
so part of: SUCO
location: join(7055472..7055604,7141133..7141226,7145053..7145167,7146766..7146876,7155213..7155361,7157962..7158099,7161011..7161161,7164656..7164779,7165717..7165853,7166332..7166399,7169490..7169597,7170901..7171006,7172678..7172698,7172870..7172925,7173563..7173654,7185155..7185223,7185970..7186060,7188947..7190083,7191329..7191416,7195118..7195272,7195596..7195687,7210438..7210493,7211401..7211844)
location: region:7055472-7211844:1
so has part: feature:7055472-7055604:1:exon
so has part: feature:7141133-7141226:1:exon
so has part: feature:7145053-7145167:1:exon
so has part: feature:7146766-7146876:1:exon
so has part: feature:7155213-7155361:1:exon
so has part: feature:7157962-7158099:1:exon
so has part: feature:7161011-7161161:1:exon
so has part: feature:7164656-7164779:1:exon
so has part: feature:7165717-7165853:1:exon
so has part: feature:7166332-7166399:1:exon
so has part: feature:7169490-7169597:1:exon
so has part: feature:7170901-7171006:1:exon
so has part: feature:7172678-7172698:1:exon
so has part: feature:7172870-7172925:1:exon
so has part: feature:7173563-7173654:1:exon
so has part: feature:7185155-7185223:1:exon
so has part: feature:7185970-7186060:1:exon
so has part: feature:7188947-7190083:1:exon
so has part: feature:7191329-7191416:1:exon
so has part: feature:7195118-7195272:1:exon
so has part: feature:7195596-7195687:1:exon
so has part: feature:7210438-7210493:1:exon
so has part: feature:7211401-7211844:1:exon

XP_012785548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7055472-7055604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7141133-7141226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7145053-7145167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7146766-7146876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7155213-7155361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7157962-7158099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7161011-7161161:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7164656-7164779:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7165717-7165853:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7166332-7166399:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7169490-7169597:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7170901-7171006:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7172678-7172698:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7172870-7172925:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7173563-7173654:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7185155-7185223:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7185970-7186060:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7188947-7190083:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7191329-7191416:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7195118-7195272:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7195596-7195687:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7210438-7210493:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7211401-7211844:1:exon

FASLG
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: FASLG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7254711..7261485
location: region:7254711-7261485:1
so has part: feature:7254711-7261485:1:exon
subclass of: SO_0000010

101528266
type: Gene
SIO_000068: ncbigene

position:7254711:1
position: 7254711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7261485:1
position: 7261485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7254711-7261485:1:exon

FASLG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: FASLG
product: Fas ligand
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_004596286.1
SIO_010081: FASLG
subclass of: SO_0000673
so part of: FASLG
location: join(7254711..7255058,7255801..7255846,7259891..7259947,7261091..7261485)
location: region:7254711-7261485:1
so has part: feature:7254711-7255058:1:exon
so has part: feature:7255801-7255846:1:exon
so has part: feature:7259891-7259947:1:exon
so has part: feature:7261091-7261485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7254711-7255058:1:exon

position:7255058:1
position: 7255058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7255801-7255846:1:exon

position:7255801:1
position: 7255801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7255846:1
position: 7255846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7259891-7259947:1:exon

position:7259891:1
position: 7259891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7259947:1
position: 7259947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7261091-7261485:1:exon

position:7261091:1
position: 7261091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FASLG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: FASLG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor ligand superfamily member 6
translation: MQQPFSYPYPQIYWVDSRASSPWAPPGAVLPCPPSVPERPGQRRPPPPPPPPLPPPPPPLPPLSSLPPSPLKKSKEHKTGLCLLVLFFIVLVALVGLGLAMFQLYHLQKELAELRESFSQRQTTSSMEKQVGHSSLPSEKKEARKVAHLTGKSNTRSNPLEWEDTYGIALISGVKYEKGSLVINDTGLYFVYSKVYFRGQACNNQPLSHKVYMRNSKYRQDLVLLEGKMMDYCTVGRMWARSSYLGAVFNLTSADHLHVNVSEISLVNFEESKTFFGLYKL
SIO_010081: FASLG
subclass of: SO_0000673
so part of: FASLG
location: join(7254711..7255058,7255801..7255846,7259891..7259947,7261091..7261485)
location: region:7254711-7261485:1
so has part: feature:7254711-7255058:1:exon
so has part: feature:7255801-7255846:1:exon
so has part: feature:7259891-7259947:1:exon
so has part: feature:7261091-7261485:1:exon

XP_004596343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7254711-7255058:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7255801-7255846:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7259891-7259947:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7261091-7261485:1:exon

TNFSF18
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TNFSF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7583605..7593550)
location: region:7583605-7593550:-1
so has part: feature:7583605-7593550:-1:exon
subclass of: SO_0000010

101533533
type: Gene
SIO_000068: ncbigene

position:7583605:-1
position: 7583605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7593550:-1
position: 7593550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7583605-7593550:-1:exon

TNFSF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TNFSF18
product: TNF superfamily member 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_004596305.1
SIO_010081: TNFSF18
subclass of: SO_0000673
so part of: TNFSF18
location: complement(join(7583605..7583951,7586633..7586663,7593398..7593550))
location: region:7583605-7593550:-1
so has part: feature:7593398-7593550:-1:exon
so has part: feature:7586633-7586663:-1:exon
so has part: feature:7583605-7583951:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7593398-7593550:-1:exon

position:7593398:-1
position: 7593398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7586633-7586663:-1:exon

position:7586633:-1
position: 7586633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7586663:-1
position: 7586663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7583605-7583951:-1:exon

position:7583951:-1
position: 7583951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNFSF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TNFSF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor ligand superfamily member 18
translation: MNLNRMESMPGSHSSQGPRRASWKLWLLCSTLLLLLLCCLSTLILTLMPLKMAKDPCVAKFGPSPSEWQMASSEPSCLNKMSDWKLRILQNGLYAIYGRVTPNPTYKGFAPFEVQLCKNKDAIQTLTDSSKIQNLGNIYEFNAGDTIELRFNSDDQVLKTNTYFGIILLANPQFGS
SIO_010081: TNFSF18
subclass of: SO_0000673
so part of: TNFSF18
location: complement(join(7583605..7583951,7586633..7586663,7593398..7593550))
location: region:7583605-7593550:-1
so has part: feature:7593398-7593550:-1:exon
so has part: feature:7586633-7586663:-1:exon
so has part: feature:7583605-7583951:-1:exon

XP_004596362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7593398-7593550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7586633-7586663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7583605-7583951:-1:exon

TNFSF4
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TNFSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7660330..7674648)
location: region:7660330-7674648:-1
so has part: feature:7660330-7674648:-1:exon
subclass of: SO_0000010

101528010
type: Gene
SIO_000068: ncbigene

position:7660330:-1
position: 7660330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7674648:-1
position: 7674648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7660330-7674648:-1:exon

TNFSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TNFSF4
product: TNF superfamily member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins
transcript id: XM_004596285.1
SIO_010081: TNFSF4
subclass of: SO_0000673
so part of: TNFSF4
location: complement(join(7660330..7660688,7662058..7662106,7674496..7674648))
location: region:7660330-7674648:-1
so has part: feature:7674496-7674648:-1:exon
so has part: feature:7662058-7662106:-1:exon
so has part: feature:7660330-7660688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7674496-7674648:-1:exon

position:7674496:-1
position: 7674496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7662058-7662106:-1:exon

position:7662058:-1
position: 7662058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7662106:-1
position: 7662106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7660330-7660688:-1:exon

position:7660688:-1
position: 7660688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNFSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TNFSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor ligand superfamily member 4
translation: MEGVQPLEENVEHTPRPRLERSKLLLVASVIQGLGLLLCLTYVCQHFRASQVSLQFAPIESIQARLQTLSPHGCENNFIITLLKTYGNMEVQNKSVIIRCDGFYLISLKGYFSQEVNINLHYRKGAEPFPILRKSKFANSNVVLRLGYKDKVYLNVTTDSNSCKQLNVNAGELFVIHQNPGGYCAP
SIO_010081: TNFSF4
subclass of: SO_0000673
so part of: TNFSF4
location: complement(join(7660330..7660688,7662058..7662106,7674496..7674648))
location: region:7660330-7674648:-1
so has part: feature:7674496-7674648:-1:exon
so has part: feature:7662058-7662106:-1:exon
so has part: feature:7660330-7660688:-1:exon

XP_004596342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7674496-7674648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7662058-7662106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7660330-7660688:-1:exon

LOC101533290
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101533290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7732426..7733626
location: region:7732426-7733626:1
so has part: feature:7732426-7733626:1:exon

101533290
type: Gene
SIO_000068: ncbigene

position:7732426:1
position: 7732426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7733626:1
position: 7733626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7732426-7733626:1:exon

LOC101533290
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101533290
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC101533290
subclass of: SO_0000673
so part of: LOC101533290
location: 7732426..7733153
location: region:7732426-7733153:1
so has part: feature:7732426-7733153:1:exon

position:7733153:1
position: 7733153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7732426-7733153:1:exon

LOC101533290
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101533290
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC101533290
subclass of: SO_0000673
so part of: LOC101533290
location: 7733228..7733626
location: region:7733228-7733626:1
so has part: feature:7733228-7733626:1:exon

position:7733228:1
position: 7733228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7733228-7733626:1:exon

LOC105942402
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105942402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7743567..7809469)
location: region:7743567-7809469:-1
so has part: feature:7743567-7809469:-1:exon

105942402
type: Gene
SIO_000068: ncbigene

position:7743567:-1
position: 7743567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7809469:-1
position: 7809469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7743567-7809469:-1:exon

LOC105942402
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC105942402
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC105942402
subclass of: SO_0000673
so part of: LOC105942402
location: complement(7743567..7744162)
location: region:7743567-7744162:-1
so has part: feature:7743567-7744162:-1:exon

position:7744162:-1
position: 7744162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7743567-7744162:-1:exon

LOC105942402
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC105942402
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC105942402
subclass of: SO_0000673
so part of: LOC105942402
location: complement(7744251..7745009)
location: region:7744251-7745009:-1
so has part: feature:7744251-7745009:-1:exon

position:7744251:-1
position: 7744251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7745009:-1
position: 7745009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7744251-7745009:-1:exon

LOC105942402
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC105942402
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC105942402
subclass of: SO_0000673
so part of: LOC105942402
location: complement(7809405..7809469)
location: region:7809405-7809469:-1
so has part: feature:7809405-7809469:-1:exon

position:7809405:-1
position: 7809405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7809405-7809469:-1:exon

PRDX6
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PRDX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7809433..7819581
location: region:7809433-7819581:1
so has part: feature:7809433-7819581:1:exon
subclass of: SO_0000010

101527755
type: Gene
SIO_000068: ncbigene

position:7809433:1
position: 7809433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7819581:1
position: 7819581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7809433-7819581:1:exon

PRDX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PRDX6
product: peroxiredoxin 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004596284.2
SIO_010081: PRDX6
subclass of: SO_0000673
so part of: PRDX6
location: join(7809433..7809562,7812507..7812663,7816351..7816497,7817552..7817698,7819282..7819581)
location: region:7809433-7819581:1
so has part: feature:7809433-7809562:1:exon
so has part: feature:7812507-7812663:1:exon
so has part: feature:7816351-7816497:1:exon
so has part: feature:7817552-7817698:1:exon
so has part: feature:7819282-7819581:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7809433-7809562:1:exon

position:7809562:1
position: 7809562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7812507-7812663:1:exon

position:7812507:1
position: 7812507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7812663:1
position: 7812663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7816351-7816497:1:exon

position:7816351:1
position: 7816351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7816497:1
position: 7816497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7817552-7817698:1:exon

position:7817552:1
position: 7817552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7817698:1
position: 7817698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7819282-7819581:1:exon

position:7819282:1
position: 7819282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRDX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PRDX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxiredoxin-6
translation: MPGGLLLGDEAPNFEANTTHGRIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKMIALSVDSVEDHLAWSKDINAYNGEAPTETLPFPIIDDNNRDLAILLGMLDPAERDEKNMPVTARVVFIFGPDKKLKLSILYPATTGRNFDEILRVVNSLQLTAEKRVATPVDWKEGDSVMVLPTIPEEEAKTLFPKGVFTKELPSGKKYLRYTPQP
SIO_010081: PRDX6
subclass of: SO_0000673
so part of: PRDX6
location: join(7809468..7809562,7812507..7812663,7816351..7816497,7817552..7817698,7819282..7819410)
location: region:7809468-7819410:1
so has part: feature:7809468-7809562:1:exon
so has part: feature:7812507-7812663:1:exon
so has part: feature:7816351-7816497:1:exon
so has part: feature:7817552-7817698:1:exon
so has part: feature:7819282-7819410:1:exon

XP_004596341.1
type: Protein
SIO_000068: ncbiprotein

position:7809468:1
position: 7809468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7819410:1
position: 7819410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7809468-7809562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7812507-7812663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7816351-7816497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7817552-7817698:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7819282-7819410:1:exon

SLC9C2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SLC9C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7829856..7898689)
location: region:7829856-7898689:-1
so has part: feature:7829856-7898689:-1:exon
subclass of: SO_0000010

101533049
type: Gene
SIO_000068: ncbigene

position:7829856:-1
position: 7829856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7898689:-1
position: 7898689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7829856-7898689:-1:exon

SLC9C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SLC9C2
product: solute carrier family 9 member C2 (putative)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930093.1
SIO_010081: SLC9C2
subclass of: SO_0000673
so part of: SLC9C2
location: complement(join(7829856..7830311,7830962..7831013,7833460..7833541,7836237..7836422,7839032..7839163,7840561..7840728,7844526..7844624,7847040..7847165,7849566..7849714,7851752..7851803,7856776..7856925,7859878..7860066,7860711..7860909,7861598..7861717,7863432..7863529,7865467..7865571,7872215..7872383,7875982..7876125,7878519..7878618,7879947..7880108,7881742..7881858,7883077..7883242,7897973..7898101,7898675..7898689))
location: region:7829856-7898689:-1
so has part: feature:7898675-7898689:-1:exon
so has part: feature:7897973-7898101:-1:exon
so has part: feature:7883077-7883242:-1:exon
so has part: feature:7881742-7881858:-1:exon
so has part: feature:7879947-7880108:-1:exon
so has part: feature:7878519-7878618:-1:exon
so has part: feature:7875982-7876125:-1:exon
so has part: feature:7872215-7872383:-1:exon
so has part: feature:7865467-7865571:-1:exon
so has part: feature:7863432-7863529:-1:exon
so has part: feature:7861598-7861717:-1:exon
so has part: feature:7860711-7860909:-1:exon
so has part: feature:7859878-7860066:-1:exon
so has part: feature:7856776-7856925:-1:exon
so has part: feature:7851752-7851803:-1:exon
so has part: feature:7849566-7849714:-1:exon
so has part: feature:7847040-7847165:-1:exon
so has part: feature:7844526-7844624:-1:exon
so has part: feature:7840561-7840728:-1:exon
so has part: feature:7839032-7839163:-1:exon
so has part: feature:7836237-7836422:-1:exon
so has part: feature:7833460-7833541:-1:exon
so has part: feature:7830962-7831013:-1:exon
so has part: feature:7829856-7830311:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7898675-7898689:-1:exon

position:7898675:-1
position: 7898675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7897973-7898101:-1:exon

position:7897973:-1
position: 7897973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7898101:-1
position: 7898101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7883077-7883242:-1:exon

position:7883077:-1
position: 7883077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7883242:-1
position: 7883242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7881742-7881858:-1:exon

position:7881742:-1
position: 7881742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7881858:-1
position: 7881858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7879947-7880108:-1:exon

position:7879947:-1
position: 7879947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7880108:-1
position: 7880108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7878519-7878618:-1:exon

position:7878519:-1
position: 7878519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7878618:-1
position: 7878618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7875982-7876125:-1:exon

position:7875982:-1
position: 7875982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7876125:-1
position: 7876125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7872215-7872383:-1:exon

position:7872215:-1
position: 7872215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7872383:-1
position: 7872383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7865467-7865571:-1:exon

position:7865467:-1
position: 7865467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7865571:-1
position: 7865571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7863432-7863529:-1:exon

position:7863432:-1
position: 7863432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7863529:-1
position: 7863529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7861598-7861717:-1:exon

position:7861598:-1
position: 7861598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7861717:-1
position: 7861717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7860711-7860909:-1:exon

position:7860711:-1
position: 7860711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7860909:-1
position: 7860909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7859878-7860066:-1:exon

position:7859878:-1
position: 7859878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7860066:-1
position: 7860066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7856776-7856925:-1:exon

position:7856776:-1
position: 7856776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7856925:-1
position: 7856925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7851752-7851803:-1:exon

position:7851752:-1
position: 7851752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7851803:-1
position: 7851803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7849566-7849714:-1:exon

position:7849566:-1
position: 7849566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7849714:-1
position: 7849714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7847040-7847165:-1:exon

position:7847040:-1
position: 7847040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7847165:-1
position: 7847165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7844526-7844624:-1:exon

position:7844526:-1
position: 7844526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7844624:-1
position: 7844624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7840561-7840728:-1:exon

position:7840561:-1
position: 7840561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7840728:-1
position: 7840728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7839032-7839163:-1:exon

position:7839032:-1
position: 7839032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7839163:-1
position: 7839163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7836237-7836422:-1:exon

position:7836237:-1
position: 7836237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7836422:-1
position: 7836422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7833460-7833541:-1:exon

position:7833460:-1
position: 7833460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7833541:-1
position: 7833541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7830962-7831013:-1:exon

position:7830962:-1
position: 7830962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7831013:-1
position: 7831013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7829856-7830311:-1:exon

position:7830311:-1
position: 7830311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC9C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SLC9C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 11
translation: MNPREVHQVVYPLLKTPSFSLLCYFLPIIIFMAALEVDLYILKNIIWQVLLTTLISFVTSFILIGYVVTNFNPEAWDPQSCLLFSIVLAITDPFYSVNALKIIGGSKMYTDIIRGESLIVCGVTAIFFGMFRSRPMHVTLFSEIHVLMEILKDICGSALCGYLCSRLIPSMLSELHSKMRSNVILCVSMVYLIFYLVEFCGMSGIVALIALGLNLDSLSFKPRMEFLLTKFLTMLSSVYQNLIYTFFGIVIGCGETKYFSFYTVVFVVILFTSVNFVRMLTIVLVSPILMRWSYEYNWRWGFVIAWSGIKGIFSILMAPDIHRLAGQRVLAPHMPGTKQFCVSPSEVETSPTDAVLIEEARLHVAMIQTSSFEKQCNDGILRKAAARILIGAVKSYCPSRGKFLSIYDVSTYVRARSWLMKFKNVLTYLGYHKERVPFPPPGSHKLMMFVYHIVFSEEFEYVGHIVTLIYVYPLIIHLWPMARELNVSTLITLNYYFMFVCILQSSLKIIIMKRRYFEQHWNILEFLIVIIGIIDVFCIYFVRLRPDNLLLIQVTVMLGYLRVIRFLHIFKILIPVLRKVVEVMVKKRLCMMFHITKGYIKSQEDTKLLLRQISACDSVYQKLQDILETNKRDAVRELGLMEHEDRDVVIAVKTEQAIRNVIAKALKNLNFLWSRGIIDKHEGSEVNEVLLTKIKALNNFPMAIPPPTADKYLPNIVWLENKYVLIDFFKERTRLAFFDYGDVICREGDRAQGIYLIVSGMASLRSSSPTFGIDSILKPRGDSKAPFTEYCTSGDVLGELSCLVKREIQYTAICETVLQAFFISVEDLYEGLDAFWPSLEYKIWLKLALSIACQYFKASLEDENLKFQSCVMDNHAYVETLSRYVELPINNATMKFVIVVYGNVINTKTEEPYFAPCIIPKTCDQVQGASDLSKLLIIQASDPDKDDNTNLGASVDTGLRMTRERK
SIO_010081: SLC9C2
subclass of: SO_0000673
so part of: SLC9C2
location: complement(join(7830970..7831013,7833460..7833541,7836237..7836422,7839032..7839163,7840561..7840728,7844526..7844624,7847040..7847165,7849566..7849714,7851752..7851803,7856776..7856925,7859878..7860066,7860711..7860909,7861598..7861717,7863432..7863529,7865467..7865571,7872215..7872383,7875982..7876125,7878519..7878618,7879947..7880108,7881742..7881858,7883077..7883242,7897973..7898101,7898675..7898689))
location: region:7830970-7898689:-1
so has part: feature:7898675-7898689:-1:exon
so has part: feature:7897973-7898101:-1:exon
so has part: feature:7883077-7883242:-1:exon
so has part: feature:7881742-7881858:-1:exon
so has part: feature:7879947-7880108:-1:exon
so has part: feature:7878519-7878618:-1:exon
so has part: feature:7875982-7876125:-1:exon
so has part: feature:7872215-7872383:-1:exon
so has part: feature:7865467-7865571:-1:exon
so has part: feature:7863432-7863529:-1:exon
so has part: feature:7861598-7861717:-1:exon
so has part: feature:7860711-7860909:-1:exon
so has part: feature:7859878-7860066:-1:exon
so has part: feature:7856776-7856925:-1:exon
so has part: feature:7851752-7851803:-1:exon
so has part: feature:7849566-7849714:-1:exon
so has part: feature:7847040-7847165:-1:exon
so has part: feature:7844526-7844624:-1:exon
so has part: feature:7840561-7840728:-1:exon
so has part: feature:7839032-7839163:-1:exon
so has part: feature:7836237-7836422:-1:exon
so has part: feature:7833460-7833541:-1:exon
so has part: feature:7830970-7831013:-1:exon

XP_012785547.1
type: Protein
SIO_000068: ncbiprotein

position:7830970:-1
position: 7830970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7898675-7898689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7897973-7898101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7883077-7883242:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7881742-7881858:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7879947-7880108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7878519-7878618:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7875982-7876125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7872215-7872383:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7865467-7865571:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7863432-7863529:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7861598-7861717:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7860711-7860909:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7859878-7860066:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7856776-7856925:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7851752-7851803:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7849566-7849714:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7847040-7847165:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7844526-7844624:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7840561-7840728:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7839032-7839163:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7836237-7836422:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7833460-7833541:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7830970-7831013:-1:exon

ANKRD45
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ANKRD45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7907324..7937809)
location: region:7907324-7937809:-1
so has part: feature:7907324-7937809:-1:exon
subclass of: SO_0000010

101532809
type: Gene
SIO_000068: ncbigene

position:7907324:-1
position: 7907324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7937809:-1
position: 7937809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7907324-7937809:-1:exon

ANKRD45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ANKRD45
product: ankyrin repeat domain 45
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012930101.1
SIO_010081: ANKRD45
subclass of: SO_0000673
so part of: ANKRD45
location: complement(join(7907324..7907512,7911370..7911508,7914013..7914107,7926749..7926916,7931059..7931407,7937760..7937809))
location: region:7907324-7937809:-1
so has part: feature:7937760-7937809:-1:exon
so has part: feature:7931059-7931407:-1:exon
so has part: feature:7926749-7926916:-1:exon
so has part: feature:7914013-7914107:-1:exon
so has part: feature:7911370-7911508:-1:exon
so has part: feature:7907324-7907512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7937760-7937809:-1:exon

position:7937760:-1
position: 7937760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7931059-7931407:-1:exon

position:7931059:-1
position: 7931059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7931407:-1
position: 7931407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7926749-7926916:-1:exon

position:7926749:-1
position: 7926749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7926916:-1
position: 7926916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7914013-7914107:-1:exon

position:7914013:-1
position: 7914013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7914107:-1
position: 7914107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7911370-7911508:-1:exon

position:7911370:-1
position: 7911370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7911508:-1
position: 7911508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7907324-7907512:-1:exon

position:7907512:-1
position: 7907512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKRD45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ANKRD45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 45
translation: MEPEGPPELVSSVKSGSFSPHEEAQEEAALESEEVTRVNPILQPALSGNVEGLQEIFENPENPHHEHAMKLLLEEDIVGRNLLYAACMAGQSGVIRALAKYGVNLNGKTTRGYTLLHCAAAWGRLETLKALVELDVDIEALNFRQEKARDVAARYSQTECVEFLDWADARLTLKKYIAKATLAVTDTEKGPGKLFKEDKNTILNACRAKTEWLETHTEASVSELFEQKQQLEDTVTPILTKLSTPRQVKSAKSVT
SIO_010081: ANKRD45
subclass of: SO_0000673
so part of: ANKRD45
location: complement(join(7907481..7907512,7911370..7911508,7914013..7914107,7926749..7926916,7931059..7931392))
location: region:7907481-7931392:-1
so has part: feature:7931059-7931392:-1:exon
so has part: feature:7926749-7926916:-1:exon
so has part: feature:7914013-7914107:-1:exon
so has part: feature:7911370-7911508:-1:exon
so has part: feature:7907481-7907512:-1:exon

XP_012785555.1
type: Protein
SIO_000068: ncbiprotein

position:7907481:-1
position: 7907481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7931392:-1
position: 7931392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7931059-7931392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7926749-7926916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7914013-7914107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7911370-7911508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7907481-7907512:-1:exon

TEX50
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TEX50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7919034..7920845
location: region:7919034-7920845:1
so has part: feature:7919034-7920845:1:exon
subclass of: SO_0000010

105942404
type: Gene
SIO_000068: ncbigene

position:7919034:1
position: 7919034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7920845:1
position: 7920845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7919034-7920845:1:exon

TEX50
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TEX50
product: testis expressed 50
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012930102.2
SIO_010081: TEX50
subclass of: SO_0000673
so part of: TEX50
location: join(7919034..7919528,7920639..7920845)
location: region:7919034-7920845:1
so has part: feature:7919034-7919528:1:exon
so has part: feature:7920639-7920845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7919034-7919528:1:exon

position:7919528:1
position: 7919528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7920639-7920845:1:exon

position:7920639:1
position: 7920639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TEX50
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TEX50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed protein 50
translation: MCNQRLSMIFPLLFACFFRDSFCICDGTTWTKVGWEIFPEEVYYLKVSPSPSHCLPYPLNKLCCDFANMDILQSCLHVASILVQTLFLILSVLSTHYLWVKWKKHKKKMKEQACLDKTDKELHSPSVYDIEQLLCKLVATTSMMTKYLNEVSQRSSSKKIKHRKSKKKKFEGAMGY
SIO_010081: TEX50
subclass of: SO_0000673
so part of: TEX50
location: join(7919205..7919528,7920639..7920845)
location: region:7919205-7920845:1
so has part: feature:7919205-7919528:1:exon
so has part: feature:7920639-7920845:1:exon

XP_012785556.1
type: Protein
SIO_000068: ncbiprotein

position:7919205:1
position: 7919205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7919205-7919528:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7920639-7920845:1:exon

LOC118760387
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760387
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7941867..7942128
location: region:7941867-7942128:1
so has part: feature:7941867-7942128:1:exon

118760387
type: Gene
SIO_000068: ncbigene

position:7941867:1
position: 7941867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7942128:1
position: 7942128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7941867-7942128:1:exon

LOC118760387
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118760387
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC118760387
subclass of: SO_0000673
so part of: LOC118760387
location: 7941867..7942128
location: region:7941867-7942128:1
so has part: feature:7941867-7942128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7941867-7942128:1:exon

KLHL20
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: KLHL20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7961888..8017440
location: region:7961888-8017440:1
so has part: feature:7961888-8017440:1:exon
subclass of: SO_0000010

101527258
type: Gene
SIO_000068: ncbigene

position:7961888:1
position: 7961888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8017440:1
position: 8017440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7961888-8017440:1:exon

KLHL20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: KLHL20
product: kelch like family member 20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 7 Proteins
transcript id: XM_004596283.3
SIO_010081: KLHL20
subclass of: SO_0000673
so part of: KLHL20
location: join(7961888..7961948,7975163..7975736,7981280..7981438,7982303..7982397,7986246..7986361,7995889..7996072,7998668..7998811,8008796..8008929,8009597..8009805,8014070..8014176,8017354..8017440)
location: region:7961888-8017440:1
so has part: feature:7961888-7961948:1:exon
so has part: feature:7975163-7975736:1:exon
so has part: feature:7981280-7981438:1:exon
so has part: feature:7982303-7982397:1:exon
so has part: feature:7986246-7986361:1:exon
so has part: feature:7995889-7996072:1:exon
so has part: feature:7998668-7998811:1:exon
so has part: feature:8008796-8008929:1:exon
so has part: feature:8009597-8009805:1:exon
so has part: feature:8014070-8014176:1:exon
so has part: feature:8017354-8017440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7961888-7961948:1:exon

position:7961948:1
position: 7961948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7975163-7975736:1:exon

position:7975163:1
position: 7975163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7975736:1
position: 7975736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7981280-7981438:1:exon

position:7981280:1
position: 7981280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7981438:1
position: 7981438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7982303-7982397:1:exon

position:7982303:1
position: 7982303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7982397:1
position: 7982397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7986246-7986361:1:exon

position:7986246:1
position: 7986246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7986361:1
position: 7986361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7995889-7996072:1:exon

position:7995889:1
position: 7995889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7996072:1
position: 7996072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7998668-7998811:1:exon

position:7998668:1
position: 7998668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7998811:1
position: 7998811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8008796-8008929:1:exon

position:8008796:1
position: 8008796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8008929:1
position: 8008929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8009597-8009805:1:exon

position:8009597:1
position: 8009597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8009805:1
position: 8009805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8014070-8014176:1:exon

position:8014070:1
position: 8014070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8014176:1
position: 8014176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8017354-8017440:1:exon

position:8017354:1
position: 8017354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLHL20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: KLHL20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 20
translation: MEGEPMRRCTNVRPGETGMDVTSRCTLGDPNKLPEGVPQPARMPYISDKHPRQTLEVINLLRKHRELCDVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRDIDERAMELLIDFAYTSQVTVEEGNVQTLLPAACLLQLAEIQEACCEFLKRQLDPSNCLGIRAFADTHSCRELLRIADKFTQHNFQEVMESEEFMLLPANQLIDIISSDELNVRSEEQVFNAVMAWVKYSIQERRPQLPQVLQHVRLPLLSPKFLVGTVGSDPLIKSDEECRDLVDEAKNYLLLPQERPLMQGPRTRPRKPIRCGEVLFAVGGWCSGDAISSVERYDPQTNEWRMVASMSKRRCGVGVSVLDDLLYAVGGHDGSSYLNSVERYDPKTNQWSSDVAPTSTCRTSVGVAVLGGFLYAVGGQDGVSCLNIVERYDPKENKWTRVASMSTRRLGVAVAVLGGFLYAVGGSDGTSPLNTVERYNPQENRWHTIAPMGTRRKHLGCAVYQDMIYAVGGRDDTTELSSAERYNPRTNQWSPVVAMTSRRSGVGLAVVNGQLMAVGGFDGTTYLKTIEVFDPDANTWRLYGGMNYRRLGGGVGVIKMTHCESHIW
SIO_010081: KLHL20
subclass of: SO_0000673
so part of: KLHL20
location: join(7961926..7961948,7975163..7975736,7981280..7981438,7982303..7982397,7986246..7986361,7995889..7996072,7998668..7998811,8008796..8008929,8009597..8009805,8014070..8014176,8017354..8017438)
location: region:7961926-8017438:1
so has part: feature:7961926-7961948:1:exon
so has part: feature:7975163-7975736:1:exon
so has part: feature:7981280-7981438:1:exon
so has part: feature:7982303-7982397:1:exon
so has part: feature:7986246-7986361:1:exon
so has part: feature:7995889-7996072:1:exon
so has part: feature:7998668-7998811:1:exon
so has part: feature:8008796-8008929:1:exon
so has part: feature:8009597-8009805:1:exon
so has part: feature:8014070-8014176:1:exon
so has part: feature:8017354-8017438:1:exon

XP_004596340.1
type: Protein
SIO_000068: ncbiprotein

position:7961926:1
position: 7961926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8017438:1
position: 8017438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7961926-7961948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7975163-7975736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7981280-7981438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7982303-7982397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7986246-7986361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7995889-7996072:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7998668-7998811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8008796-8008929:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8009597-8009805:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8014070-8014176:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8017354-8017438:1:exon

LOC105942401
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105942401
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7987168..7987916
location: region:7987168-7987916:1
so has part: feature:7987168-7987916:1:exon

105942401
type: Gene
SIO_000068: ncbigene

position:7987168:1
position: 7987168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7987916:1
position: 7987916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7987168-7987916:1:exon

LOC105942401
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC105942401
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC105942401
subclass of: SO_0000673
so part of: LOC105942401
location: 7987168..7987916
location: region:7987168-7987916:1
so has part: feature:7987168-7987916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7987168-7987916:1:exon

CENPL
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CENPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8025502..8038212)
location: region:8025502-8038212:-1
so has part: feature:8025502-8038212:-1:exon
subclass of: SO_0000010

101532566
type: Gene
SIO_000068: ncbigene

position:8025502:-1
position: 8025502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8038212:-1
position: 8038212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8025502-8038212:-1:exon

CENPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CENPL
product: centromere protein L
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_036497629.1
SIO_010081: CENPL
subclass of: SO_0000673
so part of: CENPL
location: complement(join(8025502..8025573,8026694..8027236,8031364..8031549,8038036..8038212))
location: region:8025502-8038212:-1
so has part: feature:8038036-8038212:-1:exon
so has part: feature:8031364-8031549:-1:exon
so has part: feature:8026694-8027236:-1:exon
so has part: feature:8025502-8025573:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8038036-8038212:-1:exon

position:8038036:-1
position: 8038036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8031364-8031549:-1:exon

position:8031364:-1
position: 8031364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8031549:-1
position: 8031549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8026694-8027236:-1:exon

position:8026694:-1
position: 8026694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8027236:-1
position: 8027236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8025502-8025573:-1:exon

position:8025573:-1
position: 8025573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CENPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CENPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein L
translation: MDHYDGAESMPRQCPSSDLKGGCPGATPLQRRLESVRRQPAPCVPLTPRRRIPQCSQLQENVDPQKVAFLLHKQWTLYSLTPLYKFSYSNLKEYSRLLNAFFTTEKQKGLAVEVGEDLSIKILSKSPLPSASREGKVLWTGWLCCVCGDSLLGTVSEDFTCLPLLLANGAESNTAIIGTWFQKTFDCYVSPLAISAFNLSWMAAMWTACGTDRCVATTELLWSVPCSPHSLHISYAIHPEDARALWDSVHKTPGEVTQEEVDLFMQCLESHFYRHFRIHLSATKLVRVSTSVASAHTDGKIKILCHKYLVGVLAYLTELAVFQIE
SIO_010081: CENPL
subclass of: SO_0000673
so part of: CENPL
location: complement(join(8025502..8025573,8026694..8027236,8031364..8031549,8038036..8038212))
location: region:8025502-8038212:-1
so has part: feature:8038036-8038212:-1:exon
so has part: feature:8031364-8031549:-1:exon
so has part: feature:8026694-8027236:-1:exon
so has part: feature:8025502-8025573:-1:exon

XP_036353522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8038036-8038212:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8031364-8031549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8026694-8027236:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8025502-8025573:-1:exon

DARS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: DARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8046881..8067075
location: region:8046881-8067075:1
so has part: feature:8046881-8067075:1:exon
subclass of: SO_0000010

101532328
type: Gene
SIO_000068: ncbigene

position:8046881:1
position: 8046881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8067075:1
position: 8067075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8046881-8067075:1:exon

DARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: DARS2
product: aspartyl-tRNA synthetase 2, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_004596301.1
SIO_010081: DARS2
subclass of: SO_0000673
so part of: DARS2
location: join(8046881..8046989,8047585..8047684,8048711..8048777,8050047..8050148,8050529..8050624,8052799..8052922,8053602..8053648,8054249..8054355,8054826..8054895,8055847..8056026,8058436..8058543,8060040..8060102,8063016..8063168,8063673..8063891,8064100..8064210,8065451..8065526,8066867..8067075)
location: region:8046881-8067075:1
so has part: feature:8046881-8046989:1:exon
so has part: feature:8047585-8047684:1:exon
so has part: feature:8048711-8048777:1:exon
so has part: feature:8050047-8050148:1:exon
so has part: feature:8050529-8050624:1:exon
so has part: feature:8052799-8052922:1:exon
so has part: feature:8053602-8053648:1:exon
so has part: feature:8054249-8054355:1:exon
so has part: feature:8054826-8054895:1:exon
so has part: feature:8055847-8056026:1:exon
so has part: feature:8058436-8058543:1:exon
so has part: feature:8060040-8060102:1:exon
so has part: feature:8063016-8063168:1:exon
so has part: feature:8063673-8063891:1:exon
so has part: feature:8064100-8064210:1:exon
so has part: feature:8065451-8065526:1:exon
so has part: feature:8066867-8067075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8046881-8046989:1:exon

position:8046989:1
position: 8046989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8047585-8047684:1:exon

position:8047585:1
position: 8047585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8047684:1
position: 8047684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8048711-8048777:1:exon

position:8048711:1
position: 8048711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8048777:1
position: 8048777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8050047-8050148:1:exon

position:8050047:1
position: 8050047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8050148:1
position: 8050148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8050529-8050624:1:exon

position:8050529:1
position: 8050529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8050624:1
position: 8050624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8052799-8052922:1:exon

position:8052799:1
position: 8052799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8052922:1
position: 8052922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8053602-8053648:1:exon

position:8053602:1
position: 8053602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8053648:1
position: 8053648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8054249-8054355:1:exon

position:8054249:1
position: 8054249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8054355:1
position: 8054355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8054826-8054895:1:exon

position:8054826:1
position: 8054826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8054895:1
position: 8054895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8055847-8056026:1:exon

position:8055847:1
position: 8055847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8056026:1
position: 8056026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8058436-8058543:1:exon

position:8058436:1
position: 8058436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8058543:1
position: 8058543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8060040-8060102:1:exon

position:8060040:1
position: 8060040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8060102:1
position: 8060102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8063016-8063168:1:exon

position:8063016:1
position: 8063016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8063168:1
position: 8063168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8063673-8063891:1:exon

position:8063673:1
position: 8063673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8063891:1
position: 8063891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8064100-8064210:1:exon

position:8064100:1
position: 8064100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8064210:1
position: 8064210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8065451-8065526:1:exon

position:8065451:1
position: 8065451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8065526:1
position: 8065526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8066867-8067075:1:exon

position:8066867:1
position: 8066867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: DARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aspartate--tRNA ligase, mitochondrial
translation: MCSAAGLALLSRALCRPVGWASLHRSLTLSAGRRTPELSSFTARTNTCGELRSSHLGQDVTVCGWIQHRRQNLFLVLRDSYGLVQVVIPQDESAASVKKVLCEAPVESVVRVSGTVIPRPPGQENPKMPTGEIEIKVKTAEILNSCKKLPFEIKDFVKKTEALRLRYRYLDLRSSQMQHNLRLRSRMVMKMREYLCNMHGFVDIETPTLFKRTPGGAKEFLVPSREPGRFYSLPQSPQQFKQLLMIGGFDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVEQAGIQRLVEGLLQYCWPSGGAALAAPFPCMSYAEALAMYGTDKPDTRFGMKIIDISSVFRSTEVRFLQDALNKPQGTVQAIRVPEGAKYLKRKDIESIRKLAADHFNQEVLPVFLKASTSWNSPVAQLIMEEQRLELMRLMEVREEDVIFLTAGEHKKSCSVLGRLRLACADLLEARGVALRDPALFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPDDIHLVYTEPEKVRSQHYDLVLNGSEVGGGSIRIHDAELQRYILATLLKEDVKLLSHLLQALEYGAPPHGGIALGLDRLTCLVTGAASIRDVIAFPKSFRGHDLMSGAPDCVPAEELKPYHVQVSWPADSDESSASQPQHQES
SIO_010081: DARS2
subclass of: SO_0000673
so part of: DARS2
location: join(8046881..8046989,8047585..8047684,8048711..8048777,8050047..8050148,8050529..8050624,8052799..8052922,8053602..8053648,8054249..8054355,8054826..8054895,8055847..8056026,8058436..8058543,8060040..8060102,8063016..8063168,8063673..8063891,8064100..8064210,8065451..8065526,8066867..8067075)
location: region:8046881-8067075:1
so has part: feature:8046881-8046989:1:exon
so has part: feature:8047585-8047684:1:exon
so has part: feature:8048711-8048777:1:exon
so has part: feature:8050047-8050148:1:exon
so has part: feature:8050529-8050624:1:exon
so has part: feature:8052799-8052922:1:exon
so has part: feature:8053602-8053648:1:exon
so has part: feature:8054249-8054355:1:exon
so has part: feature:8054826-8054895:1:exon
so has part: feature:8055847-8056026:1:exon
so has part: feature:8058436-8058543:1:exon
so has part: feature:8060040-8060102:1:exon
so has part: feature:8063016-8063168:1:exon
so has part: feature:8063673-8063891:1:exon
so has part: feature:8064100-8064210:1:exon
so has part: feature:8065451-8065526:1:exon
so has part: feature:8066867-8067075:1:exon

XP_004596358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8046881-8046989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8047585-8047684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8048711-8048777:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8050047-8050148:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8050529-8050624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8052799-8052922:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8053602-8053648:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8054249-8054355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8054826-8054895:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8055847-8056026:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8058436-8058543:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8060040-8060102:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8063016-8063168:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8063673-8063891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8064100-8064210:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8065451-8065526:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8066867-8067075:1:exon

LOC105942403
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105942403
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8071227..8072450)
location: region:8071227-8072450:-1
so has part: feature:8071227-8072450:-1:exon
subclass of: SO_0000011

105942403
type: Gene
SIO_000068: ncbigene

position:8071227:-1
position: 8071227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8072450:-1
position: 8072450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8071227-8072450:-1:exon

LOC105942403
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: lncRNA
gene: LOC105942403
product: uncharacterized LOC105942403
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001168431.2
SIO_010081: LOC105942403
subclass of: SO_0000673
so part of: LOC105942403
location: complement(join(8071227..8071499,8071685..8071741,8071954..8072007,8072189..8072450))
location: region:8071227-8072450:-1
so has part: feature:8072189-8072450:-1:exon
so has part: feature:8071954-8072007:-1:exon
so has part: feature:8071685-8071741:-1:exon
so has part: feature:8071227-8071499:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8072189-8072450:-1:exon

position:8072189:-1
position: 8072189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8071954-8072007:-1:exon

position:8071954:-1
position: 8071954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8072007:-1
position: 8072007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8071685-8071741:-1:exon

position:8071685:-1
position: 8071685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8071741:-1
position: 8071741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8071227-8071499:-1:exon

position:8071499:-1
position: 8071499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118760398
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760398
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8071353..8071429)
location: region:8071353-8071429:-1
so has part: feature:8071353-8071429:-1:exon
subclass of: SO_0000578

118760398
type: Gene
SIO_000068: ncbigene

position:8071353:-1
position: 8071353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8071429:-1
position: 8071429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8071353-8071429:-1:exon

LOC118760398
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118760398
product: small nucleolar RNA SNORD81
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00136
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996762.1
SIO_010081: LOC118760398
subclass of: SO_0000673
so part of: LOC118760398
location: complement(8071353..8071429)
location: region:8071353-8071429:-1
so has part: feature:8071353-8071429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8071353-8071429:-1:exon

LOC118760400
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760400
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8071566..8071642)
location: region:8071566-8071642:-1
so has part: feature:8071566-8071642:-1:exon
subclass of: SO_0000578

118760400
type: Gene
SIO_000068: ncbigene

position:8071566:-1
position: 8071566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8071642:-1
position: 8071642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8071566-8071642:-1:exon

LOC118760400
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118760400
product: small nucleolar RNA SNORD47
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00281
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996764.1
SIO_010081: LOC118760400
subclass of: SO_0000673
so part of: LOC118760400
location: complement(8071566..8071642)
location: region:8071566-8071642:-1
so has part: feature:8071566-8071642:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8071566-8071642:-1:exon

LOC118760403
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760403
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8071833..8071914)
location: region:8071833-8071914:-1
so has part: feature:8071833-8071914:-1:exon
subclass of: SO_0000578

118760403
type: Gene
SIO_000068: ncbigene

position:8071833:-1
position: 8071833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8071914:-1
position: 8071914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8071833-8071914:-1:exon

LOC118760403
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118760403
product: small nucleolar RNA snR60/Z15/Z230/Z193/J17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00309
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996767.1
SIO_010081: LOC118760403
subclass of: SO_0000673
so part of: LOC118760403
location: complement(8071833..8071914)
location: region:8071833-8071914:-1
so has part: feature:8071833-8071914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8071833-8071914:-1:exon

LOC118760399
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760399
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8072071..8072153)
location: region:8072071-8072153:-1
so has part: feature:8072071-8072153:-1:exon
subclass of: SO_0000578

118760399
type: Gene
SIO_000068: ncbigene

position:8072071:-1
position: 8072071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8072153:-1
position: 8072153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8072071-8072153:-1:exon

LOC118760399
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118760399
product: small nucleolar RNA SNORD79
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00152
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996763.1
SIO_010081: LOC118760399
subclass of: SO_0000673
so part of: LOC118760399
location: complement(8072071..8072153)
location: region:8072071-8072153:-1
so has part: feature:8072071-8072153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8072071-8072153:-1:exon

LOC118760408
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760408
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8072845..8072908)
location: region:8072845-8072908:-1
so has part: feature:8072845-8072908:-1:exon
subclass of: SO_0000578

118760408
type: Gene
SIO_000068: ncbigene

position:8072845:-1
position: 8072845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8072908:-1
position: 8072908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8072845-8072908:-1:exon

LOC118760408
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118760408
product: small nucleolar RNA SNORD78
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00592
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996772.1
SIO_010081: LOC118760408
subclass of: SO_0000673
so part of: LOC118760408
location: complement(8072845..8072908)
location: region:8072845-8072908:-1
so has part: feature:8072845-8072908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8072845-8072908:-1:exon

LOC118760402
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760402
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8073127..8073187)
location: region:8073127-8073187:-1
so has part: feature:8073127-8073187:-1:exon
subclass of: SO_0000578

118760402
type: Gene
SIO_000068: ncbigene

position:8073127:-1
position: 8073127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8073187:-1
position: 8073187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8073127-8073187:-1:exon

LOC118760402
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118760402
product: small nucleolar RNA SNORD44
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00287
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996766.1
SIO_010081: LOC118760402
subclass of: SO_0000673
so part of: LOC118760402
location: complement(8073127..8073187)
location: region:8073127-8073187:-1
so has part: feature:8073127-8073187:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8073127-8073187:-1:exon

LOC118760406
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760406
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8073448..8073515)
location: region:8073448-8073515:-1
so has part: feature:8073448-8073515:-1:exon
subclass of: SO_0000578

118760406
type: Gene
SIO_000068: ncbigene

position:8073448:-1
position: 8073448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8073515:-1
position: 8073515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8073448-8073515:-1:exon

LOC118760406
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118760406
product: small nucleolar RNA SNORD77
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00591
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996770.1
SIO_010081: LOC118760406
subclass of: SO_0000673
so part of: LOC118760406
location: complement(8073448..8073515)
location: region:8073448-8073515:-1
so has part: feature:8073448-8073515:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8073448-8073515:-1:exon

LOC118760397
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760397
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8073691..8073772)
location: region:8073691-8073772:-1
so has part: feature:8073691-8073772:-1:exon
subclass of: SO_0000578

118760397
type: Gene
SIO_000068: ncbigene

position:8073691:-1
position: 8073691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8073772:-1
position: 8073772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8073691-8073772:-1:exon

LOC118760397
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118760397
product: small nucleolar RNA SNORD24
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00069
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996761.1
SIO_010081: LOC118760397
subclass of: SO_0000673
so part of: LOC118760397
location: complement(8073691..8073772)
location: region:8073691-8073772:-1
so has part: feature:8073691-8073772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8073691-8073772:-1:exon

LOC118760409
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760409
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8073919..8073980)
location: region:8073919-8073980:-1
so has part: feature:8073919-8073980:-1:exon
subclass of: SO_0000578

118760409
type: Gene
SIO_000068: ncbigene

position:8073919:-1
position: 8073919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8073980:-1
position: 8073980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8073919-8073980:-1:exon

LOC118760409
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118760409
product: small nucleolar RNA SNORD75
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00612
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996773.1
SIO_010081: LOC118760409
subclass of: SO_0000673
so part of: LOC118760409
location: complement(8073919..8073980)
location: region:8073919-8073980:-1
so has part: feature:8073919-8073980:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8073919-8073980:-1:exon

LOC118760401
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760401
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8074231..8074308)
location: region:8074231-8074308:-1
so has part: feature:8074231-8074308:-1:exon
subclass of: SO_0000578

118760401
type: Gene
SIO_000068: ncbigene

position:8074231:-1
position: 8074231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8074308:-1
position: 8074308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8074231-8074308:-1:exon

LOC118760401
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118760401
product: small nucleolar RNA SNORD74
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00284
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996765.1
SIO_010081: LOC118760401
subclass of: SO_0000673
so part of: LOC118760401
location: complement(8074231..8074308)
location: region:8074231-8074308:-1
so has part: feature:8074231-8074308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8074231-8074308:-1:exon

ZBTB37
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ZBTB37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8076409..8110129
location: region:8076409-8110129:1
so has part: feature:8076409-8110129:1:exon
subclass of: SO_0000010

101527012
type: Gene
SIO_000068: ncbigene

position:8076409:1
position: 8076409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8110129:1
position: 8110129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8076409-8110129:1:exon

ZBTB37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ZBTB37
product: zinc finger and BTB domain containing 37
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_004596282.1
SIO_010081: ZBTB37
subclass of: SO_0000673
so part of: ZBTB37
location: join(8076409..8076470,8076571..8076784,8083081..8083727,8085196..8085295,8109641..8110129)
location: region:8076409-8110129:1
so has part: feature:8076409-8076470:1:exon
so has part: feature:8076571-8076784:1:exon
so has part: feature:8083081-8083727:1:exon
so has part: feature:8085196-8085295:1:exon
so has part: feature:8109641-8110129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8076409-8076470:1:exon

position:8076470:1
position: 8076470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8076571-8076784:1:exon

position:8076571:1
position: 8076571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8076784:1
position: 8076784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8083081-8083727:1:exon

position:8083081:1
position: 8083081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8083727:1
position: 8083727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8085196-8085295:1:exon

position:8085196:1
position: 8085196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8085295:1
position: 8085295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8109641-8110129:1:exon

position:8109641:1
position: 8109641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZBTB37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ZBTB37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 37
translation: MEKGGNIQLEIPDFSNSVLSHLNQLRMQGRLCDIVVNVQGQAFRAHKVVLAASSPYFRDHMSLNEMSTVSISVIKNPTVFEQLLSFCYTGRICLQLADIISYLTAASFLQMQHVIDKCTQILEGIHFKISVADVEPECTQVRTKHPERPPESPRVTPNLSRPLSPRHGTAKGNRRGPVSAVLDIRELSPPEESTSPHIIEQSSDVESREPILRINRAGQWYVETGLADRGGRSDDEVRVLGAVHIKTENLEEWLGPESQPSGEEGSSAEDVTAMVIDTTGHSAIGQESYSLSSAGPKVARPTSSEVDRFSPSGSVAPLTERHRARSESPGRMDEPKQPSSQVEESAVMGVSGYVEYLREQEVSERWFRYNPRLTCIYCAKSFNQKGSLDRHMRLHMGITPFVCRMCGKKYTRKDQLEYHIRKHTGNKPFHCHVCGKSFPFQAILNQHFRKNHPGCIPLEGPHSISPETTVTSRGQAEEESPSQEETVASGETAQGSVSTTGPD
SIO_010081: ZBTB37
subclass of: SO_0000673
so part of: ZBTB37
location: join(8076409..8076470,8076571..8076784,8083081..8083727,8085196..8085295,8109641..8110129)
location: region:8076409-8110129:1
so has part: feature:8076409-8076470:1:exon
so has part: feature:8076571-8076784:1:exon
so has part: feature:8083081-8083727:1:exon
so has part: feature:8085196-8085295:1:exon
so has part: feature:8109641-8110129:1:exon

XP_004596339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8076409-8076470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8076571-8076784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8083081-8083727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8085196-8085295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8109641-8110129:1:exon

SERPINC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SERPINC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8124982..8138299)
location: region:8124982-8138299:-1
so has part: feature:8124982-8138299:-1:exon
subclass of: SO_0000010

101526763
type: Gene
SIO_000068: ncbigene

position:8124982:-1
position: 8124982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8138299:-1
position: 8138299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8124982-8138299:-1:exon

SERPINC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SERPINC1
product: serpin family C member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 47% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036497637.1
SIO_010081: SERPINC1
subclass of: SO_0000673
so part of: SERPINC1
location: complement(join(8124982..8125235,8128616..8128680,8129934..8130324,8131941..8132078,8136008..8136377,8138216..8138299))
location: region:8124982-8138299:-1
so has part: feature:8138216-8138299:-1:exon
so has part: feature:8136008-8136377:-1:exon
so has part: feature:8131941-8132078:-1:exon
so has part: feature:8129934-8130324:-1:exon
so has part: feature:8128616-8128680:-1:exon
so has part: feature:8124982-8125235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8138216-8138299:-1:exon

position:8138216:-1
position: 8138216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8136008-8136377:-1:exon

position:8136008:-1
position: 8136008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8136377:-1
position: 8136377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8131941-8132078:-1:exon

position:8131941:-1
position: 8131941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8132078:-1
position: 8132078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8129934-8130324:-1:exon

position:8129934:-1
position: 8129934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8130324:-1
position: 8130324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8128616-8128680:-1:exon

position:8128616:-1
position: 8128616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8128680:-1
position: 8128680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8124982-8125235:-1:exon

position:8125235:-1
position: 8125235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERPINC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SERPINC1
product: serpin family C member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036497635.1
SIO_010081: SERPINC1
subclass of: SO_0000673
so part of: SERPINC1
location: complement(join(8124982..8125235,8128616..8128680,8129934..8130324,8131962..8132078,8132855..8133070,8136008..8136377,8138216..8138299))
location: region:8124982-8138299:-1
so has part: feature:8138216-8138299:-1:exon
so has part: feature:8136008-8136377:-1:exon
so has part: feature:8132855-8133070:-1:exon
so has part: feature:8131962-8132078:-1:exon
so has part: feature:8129934-8130324:-1:exon
so has part: feature:8128616-8128680:-1:exon
so has part: feature:8124982-8125235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8138216-8138299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8136008-8136377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8132855-8133070:-1:exon

position:8132855:-1
position: 8132855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8133070:-1
position: 8133070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8131962-8132078:-1:exon

position:8131962:-1
position: 8131962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8129934-8130324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8128616-8128680:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8124982-8125235:-1:exon

SERPINC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SERPINC1
product: serpin family C member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036497636.1
SIO_010081: SERPINC1
subclass of: SO_0000673
so part of: SERPINC1
location: complement(join(8124982..8125235,8128616..8128680,8129934..8130267,8131941..8132078,8132855..8133070,8136008..8136377,8138216..8138299))
location: region:8124982-8138299:-1
so has part: feature:8138216-8138299:-1:exon
so has part: feature:8136008-8136377:-1:exon
so has part: feature:8132855-8133070:-1:exon
so has part: feature:8131941-8132078:-1:exon
so has part: feature:8129934-8130267:-1:exon
so has part: feature:8128616-8128680:-1:exon
so has part: feature:8124982-8125235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8138216-8138299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8136008-8136377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8132855-8133070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8131941-8132078:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8129934-8130267:-1:exon

position:8130267:-1
position: 8130267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8128616-8128680:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8124982-8125235:-1:exon

SERPINC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SERPINC1
product: serpin family C member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004596281.2
SIO_010081: SERPINC1
subclass of: SO_0000673
so part of: SERPINC1
location: complement(join(8124982..8125235,8128616..8128680,8129934..8130324,8131941..8132078,8132855..8133070,8136008..8136377,8138216..8138299))
location: region:8124982-8138299:-1
so has part: feature:8138216-8138299:-1:exon
so has part: feature:8136008-8136377:-1:exon
so has part: feature:8132855-8133070:-1:exon
so has part: feature:8131941-8132078:-1:exon
so has part: feature:8129934-8130324:-1:exon
so has part: feature:8128616-8128680:-1:exon
so has part: feature:8124982-8125235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8138216-8138299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8136008-8136377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8132855-8133070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8131941-8132078:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8129934-8130324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8128616-8128680:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8124982-8125235:-1:exon

SERPINC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SERPINC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antithrombin-III isoform X4
translation: MYSKGMGAVAAGRRKGCLLSLLLLGVWGSVACYESPVEDICLAKPRDLPVNPMCIYRSPEKKTAEEEGSEPKLPEATNRRVWELSRANSRFATAFYQHLADSKSNSDNIFLSPLSISTAFAMTKLGACNDTLKQLMEGSAKQARTVINDWVSNKTEGRIKEVLPEGAIDELTVLVLVNTIYFKGLWKSKFSLENTRDELFHKADEASCSVPMMYQEGKFRYRRVAEGTQVLELPFRGDDITMVLILPQPGKSLAKLEQELSPETLQEWLDELGETLLAVHMPRFRIEDGFSLKEKLQDMGLVDLFNPAKSQLPGIVAGGREELYVSDAFHKAFLEVNEEGSEAAASTAIVIAGRSLNVNRVTFKANRPFLVLIREAALNTIIFMGRVANPCVR
SIO_010081: SERPINC1
subclass of: SO_0000673
so part of: SERPINC1
location: complement(join(8125059..8125235,8128616..8128680,8129934..8130324,8131941..8132078,8136008..8136377,8138216..8138256))
location: region:8125059-8138256:-1
so has part: feature:8138216-8138256:-1:exon
so has part: feature:8136008-8136377:-1:exon
so has part: feature:8131941-8132078:-1:exon
so has part: feature:8129934-8130324:-1:exon
so has part: feature:8128616-8128680:-1:exon
so has part: feature:8125059-8125235:-1:exon

XP_036353530.1
type: Protein
SIO_000068: ncbiprotein

position:8125059:-1
position: 8125059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8138256:-1
position: 8138256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8138216-8138256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8136008-8136377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8131941-8132078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8129934-8130324:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8128616-8128680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8125059-8125235:-1:exon

SERPINC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SERPINC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antithrombin-III isoform X2
translation: MYSKGMGAVAAGRRKGCLLSLLLLGVWGSVACYESPVEDICLAKPRDLPVNPMCIYRSPEKKTAEEEGSEPKLPEATNRRVWELSRANSRFATAFYQHLADSKSNSDNIFLSPLSISTAFAMTKLGACNDTLKQLMEVFKFDTISEKTSDQVHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNGTYQDISEAVYGAKLQPLDFKGSAKQARTVINDWVSNKTEGRIKEVLPEGAIDELTVLVLGLWKSKFSLENTRDELFHKADEASCSVPMMYQEGKFRYRRVAEGTQVLELPFRGDDITMVLILPQPGKSLAKLEQELSPETLQEWLDELGETLLAVHMPRFRIEDGFSLKEKLQDMGLVDLFNPAKSQLPGIVAGGREELYVSDAFHKAFLEVNEEGSEAAASTAIVIAGRSLNVNRVTFKANRPFLVLIREAALNTIIFMGRVANPCVR
SIO_010081: SERPINC1
subclass of: SO_0000673
so part of: SERPINC1
location: complement(join(8125059..8125235,8128616..8128680,8129934..8130324,8131962..8132078,8132855..8133070,8136008..8136377,8138216..8138256))
location: region:8125059-8138256:-1
so has part: feature:8138216-8138256:-1:exon
so has part: feature:8136008-8136377:-1:exon
so has part: feature:8132855-8133070:-1:exon
so has part: feature:8131962-8132078:-1:exon
so has part: feature:8129934-8130324:-1:exon
so has part: feature:8128616-8128680:-1:exon
so has part: feature:8125059-8125235:-1:exon

XP_036353528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8138216-8138256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8136008-8136377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8132855-8133070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8131962-8132078:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8129934-8130324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8128616-8128680:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8125059-8125235:-1:exon

SERPINC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SERPINC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antithrombin-III isoform X3
translation: MYSKGMGAVAAGRRKGCLLSLLLLGVWGSVACYESPVEDICLAKPRDLPVNPMCIYRSPEKKTAEEEGSEPKLPEATNRRVWELSRANSRFATAFYQHLADSKSNSDNIFLSPLSISTAFAMTKLGACNDTLKQLMEVFKFDTISEKTSDQVHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNGTYQDISEAVYGAKLQPLDFKGSAKQARTVINDWVSNKTEGRIKEVLPEGAIDELTVLVLVNTIYFKADEASCSVPMMYQEGKFRYRRVAEGTQVLELPFRGDDITMVLILPQPGKSLAKLEQELSPETLQEWLDELGETLLAVHMPRFRIEDGFSLKEKLQDMGLVDLFNPAKSQLPGIVAGGREELYVSDAFHKAFLEVNEEGSEAAASTAIVIAGRSLNVNRVTFKANRPFLVLIREAALNTIIFMGRVANPCVR
SIO_010081: SERPINC1
subclass of: SO_0000673
so part of: SERPINC1
location: complement(join(8125059..8125235,8128616..8128680,8129934..8130267,8131941..8132078,8132855..8133070,8136008..8136377,8138216..8138256))
location: region:8125059-8138256:-1
so has part: feature:8138216-8138256:-1:exon
so has part: feature:8136008-8136377:-1:exon
so has part: feature:8132855-8133070:-1:exon
so has part: feature:8131941-8132078:-1:exon
so has part: feature:8129934-8130267:-1:exon
so has part: feature:8128616-8128680:-1:exon
so has part: feature:8125059-8125235:-1:exon

XP_036353529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8138216-8138256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8136008-8136377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8132855-8133070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8131941-8132078:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8129934-8130267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8128616-8128680:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8125059-8125235:-1:exon

SERPINC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SERPINC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antithrombin-III isoform X1
translation: MYSKGMGAVAAGRRKGCLLSLLLLGVWGSVACYESPVEDICLAKPRDLPVNPMCIYRSPEKKTAEEEGSEPKLPEATNRRVWELSRANSRFATAFYQHLADSKSNSDNIFLSPLSISTAFAMTKLGACNDTLKQLMEVFKFDTISEKTSDQVHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNGTYQDISEAVYGAKLQPLDFKGSAKQARTVINDWVSNKTEGRIKEVLPEGAIDELTVLVLVNTIYFKGLWKSKFSLENTRDELFHKADEASCSVPMMYQEGKFRYRRVAEGTQVLELPFRGDDITMVLILPQPGKSLAKLEQELSPETLQEWLDELGETLLAVHMPRFRIEDGFSLKEKLQDMGLVDLFNPAKSQLPGIVAGGREELYVSDAFHKAFLEVNEEGSEAAASTAIVIAGRSLNVNRVTFKANRPFLVLIREAALNTIIFMGRVANPCVR
SIO_010081: SERPINC1
subclass of: SO_0000673
so part of: SERPINC1
location: complement(join(8125059..8125235,8128616..8128680,8129934..8130324,8131941..8132078,8132855..8133070,8136008..8136377,8138216..8138256))
location: region:8125059-8138256:-1
so has part: feature:8138216-8138256:-1:exon
so has part: feature:8136008-8136377:-1:exon
so has part: feature:8132855-8133070:-1:exon
so has part: feature:8131941-8132078:-1:exon
so has part: feature:8129934-8130324:-1:exon
so has part: feature:8128616-8128680:-1:exon
so has part: feature:8125059-8125235:-1:exon

XP_004596338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8138216-8138256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8136008-8136377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8132855-8133070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8131941-8132078:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8129934-8130324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8128616-8128680:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8125059-8125235:-1:exon

RC3H1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RC3H1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8150928..8213323)
location: region:8150928-8213323:-1
so has part: feature:8150928-8213323:-1:exon
subclass of: SO_0000010

101526515
type: Gene
SIO_000068: ncbigene

position:8150928:-1
position: 8150928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8213323:-1
position: 8213323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8150928-8213323:-1:exon

RC3H1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RC3H1
product: ring finger and CCCH-type domains 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_012930100.1
SIO_010081: RC3H1
subclass of: SO_0000673
so part of: RC3H1
location: complement(join(8150928..8151078,8152321..8152436,8154176..8154319,8156578..8156710,8156874..8156964,8157365..8157578,8159915..8160067,8161258..8161425,8161876..8162246,8166371..8166582,8166816..8167097,8170548..8170660,8172468..8172586,8176956..8177088,8179497..8179697,8182955..8183130,8183493..8183732,8185021..8185141,8213093..8213323))
location: region:8150928-8213323:-1
so has part: feature:8213093-8213323:-1:exon
so has part: feature:8185021-8185141:-1:exon
so has part: feature:8183493-8183732:-1:exon
so has part: feature:8182955-8183130:-1:exon
so has part: feature:8179497-8179697:-1:exon
so has part: feature:8176956-8177088:-1:exon
so has part: feature:8172468-8172586:-1:exon
so has part: feature:8170548-8170660:-1:exon
so has part: feature:8166816-8167097:-1:exon
so has part: feature:8166371-8166582:-1:exon
so has part: feature:8161876-8162246:-1:exon
so has part: feature:8161258-8161425:-1:exon
so has part: feature:8159915-8160067:-1:exon
so has part: feature:8157365-8157578:-1:exon
so has part: feature:8156874-8156964:-1:exon
so has part: feature:8156578-8156710:-1:exon
so has part: feature:8154176-8154319:-1:exon
so has part: feature:8152321-8152436:-1:exon
so has part: feature:8150928-8151078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8213093-8213323:-1:exon

position:8213093:-1
position: 8213093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8185021-8185141:-1:exon

position:8185021:-1
position: 8185021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8185141:-1
position: 8185141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8183493-8183732:-1:exon

position:8183493:-1
position: 8183493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8183732:-1
position: 8183732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8182955-8183130:-1:exon

position:8182955:-1
position: 8182955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8183130:-1
position: 8183130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8179497-8179697:-1:exon

position:8179497:-1
position: 8179497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8179697:-1
position: 8179697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8176956-8177088:-1:exon

position:8176956:-1
position: 8176956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8177088:-1
position: 8177088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8172468-8172586:-1:exon

position:8172468:-1
position: 8172468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8172586:-1
position: 8172586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8170548-8170660:-1:exon

position:8170548:-1
position: 8170548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8170660:-1
position: 8170660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8166816-8167097:-1:exon

position:8166816:-1
position: 8166816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8167097:-1
position: 8167097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8166371-8166582:-1:exon

position:8166371:-1
position: 8166371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8166582:-1
position: 8166582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8161876-8162246:-1:exon

position:8161876:-1
position: 8161876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8162246:-1
position: 8162246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8161258-8161425:-1:exon

position:8161258:-1
position: 8161258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8161425:-1
position: 8161425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8159915-8160067:-1:exon

position:8159915:-1
position: 8159915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8160067:-1
position: 8160067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8157365-8157578:-1:exon

position:8157365:-1
position: 8157365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8157578:-1
position: 8157578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8156874-8156964:-1:exon

position:8156874:-1
position: 8156874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8156964:-1
position: 8156964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8156578-8156710:-1:exon

position:8156578:-1
position: 8156578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8156710:-1
position: 8156710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8154176-8154319:-1:exon

position:8154176:-1
position: 8154176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8154319:-1
position: 8154319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8152321-8152436:-1:exon

position:8152321:-1
position: 8152321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8152436:-1
position: 8152436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8150928-8151078:-1:exon

position:8151078:-1
position: 8151078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RC3H1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RC3H1
product: ring finger and CCCH-type domains 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_004596280.1
SIO_010081: RC3H1
subclass of: SO_0000673
so part of: RC3H1
location: complement(join(8150928..8151078,8152321..8152436,8154176..8154346,8156578..8156710,8156874..8156964,8157365..8157578,8159915..8160067,8161258..8161425,8161876..8162246,8166371..8166582,8166816..8167097,8170548..8170660,8172468..8172586,8176956..8177088,8179497..8179697,8182955..8183130,8183493..8183732,8185021..8185141,8213093..8213323))
location: region:8150928-8213323:-1
so has part: feature:8213093-8213323:-1:exon
so has part: feature:8185021-8185141:-1:exon
so has part: feature:8183493-8183732:-1:exon
so has part: feature:8182955-8183130:-1:exon
so has part: feature:8179497-8179697:-1:exon
so has part: feature:8176956-8177088:-1:exon
so has part: feature:8172468-8172586:-1:exon
so has part: feature:8170548-8170660:-1:exon
so has part: feature:8166816-8167097:-1:exon
so has part: feature:8166371-8166582:-1:exon
so has part: feature:8161876-8162246:-1:exon
so has part: feature:8161258-8161425:-1:exon
so has part: feature:8159915-8160067:-1:exon
so has part: feature:8157365-8157578:-1:exon
so has part: feature:8156874-8156964:-1:exon
so has part: feature:8156578-8156710:-1:exon
so has part: feature:8154176-8154346:-1:exon
so has part: feature:8152321-8152436:-1:exon
so has part: feature:8150928-8151078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8213093-8213323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8185021-8185141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8183493-8183732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8182955-8183130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8179497-8179697:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8176956-8177088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8172468-8172586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8170548-8170660:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8166816-8167097:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8166371-8166582:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8161876-8162246:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8161258-8161425:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8159915-8160067:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8157365-8157578:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8156874-8156964:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8156578-8156710:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8154176-8154346:-1:exon

position:8154346:-1
position: 8154346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8152321-8152436:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8150928-8151078:-1:exon

RC3H1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RC3H1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roquin-1 isoform X2
translation: MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTDIELLPVNSALLQLVGAQVPEQQPVTLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQAPQHSKYKTYMCRDMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLAPRRPLSASLGQLNEVGLPSAAILPDETAVELPDRKPPALPNGIVSAGGSATQLIPRGTDPSYDAGLKPGKLDHLSSSAPGSPPDLLESVPKSVSALPVNPHSVPPRGPDLPPVPVAKPLQMVPRGSQLYPAQQADVYYQDPRGAAPTFEPAPYQQGVYYTAPPPCVSRFVRPAPSAPEPGPPCLDHYPAYLQDRVVSSQYGTQPQQYPPVYPPHYDGRRVYPAQSYTREEIFRESPIPIEVPPAPVPSYVPESRERYQQMEGYYPVAPHPSQIRAPYPREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPPAFHQEEFLDEDLKAAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDAVAAGSMEMMNMEGKGVRDPRLDPQRRAAEASDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMVPAGAPTKSLGISDYSPYGSHAAWGGSPYSPHQNMPSQGHFGERERIPMSEVGGHGKPLPCADREQLRLELQQLNHQISQQSQLRGLEREASTLAGQPQPPPPPPKWPGMISSEQLSLELHHVEREIGKRTRELSMENQCSLDMKSKLNASKQTENGQAEPQAKGPAEDLTLTFSDVPNGSALTQENASLLSSKTSSLKLSEDPEAGGDNSGCQRPGMPPSAAP
SIO_010081: RC3H1
subclass of: SO_0000673
so part of: RC3H1
location: complement(join(8150928..8151078,8152321..8152436,8154176..8154319,8156578..8156710,8156874..8156964,8157365..8157578,8159915..8160067,8161258..8161425,8161876..8162246,8166371..8166582,8166816..8167097,8170548..8170660,8172468..8172586,8176956..8177088,8179497..8179697,8182955..8183130,8183493..8183732,8185021..8185141,8213093..8213323))
location: region:8150928-8213323:-1
so has part: feature:8213093-8213323:-1:exon
so has part: feature:8185021-8185141:-1:exon
so has part: feature:8183493-8183732:-1:exon
so has part: feature:8182955-8183130:-1:exon
so has part: feature:8179497-8179697:-1:exon
so has part: feature:8176956-8177088:-1:exon
so has part: feature:8172468-8172586:-1:exon
so has part: feature:8170548-8170660:-1:exon
so has part: feature:8166816-8167097:-1:exon
so has part: feature:8166371-8166582:-1:exon
so has part: feature:8161876-8162246:-1:exon
so has part: feature:8161258-8161425:-1:exon
so has part: feature:8159915-8160067:-1:exon
so has part: feature:8157365-8157578:-1:exon
so has part: feature:8156874-8156964:-1:exon
so has part: feature:8156578-8156710:-1:exon
so has part: feature:8154176-8154319:-1:exon
so has part: feature:8152321-8152436:-1:exon
so has part: feature:8150928-8151078:-1:exon

XP_012785554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8213093-8213323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8185021-8185141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8183493-8183732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8182955-8183130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8179497-8179697:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8176956-8177088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8172468-8172586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8170548-8170660:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8166816-8167097:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8166371-8166582:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8161876-8162246:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8161258-8161425:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8159915-8160067:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8157365-8157578:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8156874-8156964:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8156578-8156710:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8154176-8154319:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8152321-8152436:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8150928-8151078:-1:exon

RC3H1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RC3H1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roquin-1 isoform X1
translation: MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTDIELLPVNSALLQLVGAQVPEQQPVTLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQAPQHSKYKTYMCRDMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLAPRRPLSASLGQLNEVGLPSAAILPDETAVELPDRKPPALPNGIVSAGGSATQLIPRGTDPSYDAGLKPGKLDHLSSSAPGSPPDLLESVPKSVSALPVNPHSVPPRGPDLPPVPVAKPLQMVPRGSQLYPAQQADVYYQDPRGAAPTFEPAPYQQGVYYTAPPPCVSRFVRPAPSAPEPGPPCLDHYPAYLQDRVVSSQYGTQPQQYPPVYPPHYDGRRVYPAQSYTREEIFRESPIPIEVPPAPVPSYVPESRERYQQMEGYYPVAPHPSQIRAPYPREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPPAFHQEEFLDEDLKAAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDAVAAGSMEMMNMEGKGVRDPRLDPQRRAAEASDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMVPAGAPTKSLGISDYSPYGSHAAWGGSPYSPHQNMPSQGHFGERERIPMSEVGGHGKPLPCADREQLRLELQQLNHQISQQSQLRGLEAVSNRLLLQREASTLAGQPQPPPPPPKWPGMISSEQLSLELHHVEREIGKRTRELSMENQCSLDMKSKLNASKQTENGQAEPQAKGPAEDLTLTFSDVPNGSALTQENASLLSSKTSSLKLSEDPEAGGDNSGCQRPGMPPSAAP
SIO_010081: RC3H1
subclass of: SO_0000673
so part of: RC3H1
location: complement(join(8150928..8151078,8152321..8152436,8154176..8154346,8156578..8156710,8156874..8156964,8157365..8157578,8159915..8160067,8161258..8161425,8161876..8162246,8166371..8166582,8166816..8167097,8170548..8170660,8172468..8172586,8176956..8177088,8179497..8179697,8182955..8183130,8183493..8183732,8185021..8185141,8213093..8213323))
location: region:8150928-8213323:-1
so has part: feature:8213093-8213323:-1:exon
so has part: feature:8185021-8185141:-1:exon
so has part: feature:8183493-8183732:-1:exon
so has part: feature:8182955-8183130:-1:exon
so has part: feature:8179497-8179697:-1:exon
so has part: feature:8176956-8177088:-1:exon
so has part: feature:8172468-8172586:-1:exon
so has part: feature:8170548-8170660:-1:exon
so has part: feature:8166816-8167097:-1:exon
so has part: feature:8166371-8166582:-1:exon
so has part: feature:8161876-8162246:-1:exon
so has part: feature:8161258-8161425:-1:exon
so has part: feature:8159915-8160067:-1:exon
so has part: feature:8157365-8157578:-1:exon
so has part: feature:8156874-8156964:-1:exon
so has part: feature:8156578-8156710:-1:exon
so has part: feature:8154176-8154346:-1:exon
so has part: feature:8152321-8152436:-1:exon
so has part: feature:8150928-8151078:-1:exon

XP_004596337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8213093-8213323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8185021-8185141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8183493-8183732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8182955-8183130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8179497-8179697:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8176956-8177088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8172468-8172586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8170548-8170660:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8166816-8167097:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8166371-8166582:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8161876-8162246:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8161258-8161425:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8159915-8160067:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8157365-8157578:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8156874-8156964:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8156578-8156710:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8154176-8154346:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8152321-8152436:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8150928-8151078:-1:exon

LOC105942406
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105942406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8432210..9042651
location: region:8432210-9042651:1
so has part: feature:8432210-9042651:1:exon
subclass of: SO_0000010

105942406
type: Gene
SIO_000068: ncbigene

position:8432210:1
position: 8432210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9042651:1
position: 9042651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8432210-9042651:1:exon

LOC105942406
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC105942406
product: rab GTPase-activating protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036497640.1
SIO_010081: LOC105942406
subclass of: SO_0000673
so part of: LOC105942406
location: join(8432210..8432389,8442046..8442220,8460049..8460206,8461608..8461718,8475421..8475487,8477541..8477643,8481110..8481276,8508110..8508251,8541350..8541443,8559368..8559518,8745346..8745459,8788863..8788937,8794405..8794530,8795347..8795490,8871726..8871767,8928409..8928537,9042084..9042176,9042365..9042651)
location: region:8432210-9042651:1
so has part: feature:8432210-8432389:1:exon
so has part: feature:8442046-8442220:1:exon
so has part: feature:8460049-8460206:1:exon
so has part: feature:8461608-8461718:1:exon
so has part: feature:8475421-8475487:1:exon
so has part: feature:8477541-8477643:1:exon
so has part: feature:8481110-8481276:1:exon
so has part: feature:8508110-8508251:1:exon
so has part: feature:8541350-8541443:1:exon
so has part: feature:8559368-8559518:1:exon
so has part: feature:8745346-8745459:1:exon
so has part: feature:8788863-8788937:1:exon
so has part: feature:8794405-8794530:1:exon
so has part: feature:8795347-8795490:1:exon
so has part: feature:8871726-8871767:1:exon
so has part: feature:8928409-8928537:1:exon
so has part: feature:9042084-9042176:1:exon
so has part: feature:9042365-9042651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8432210-8432389:1:exon

position:8432389:1
position: 8432389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8442046-8442220:1:exon

position:8442046:1
position: 8442046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8442220:1
position: 8442220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8460049-8460206:1:exon

position:8460049:1
position: 8460049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8460206:1
position: 8460206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8461608-8461718:1:exon

position:8461608:1
position: 8461608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8461718:1
position: 8461718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8475421-8475487:1:exon

position:8475421:1
position: 8475421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8475487:1
position: 8475487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8477541-8477643:1:exon

position:8477541:1
position: 8477541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8477643:1
position: 8477643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8481110-8481276:1:exon

position:8481110:1
position: 8481110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8481276:1
position: 8481276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8508110-8508251:1:exon

position:8508110:1
position: 8508110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8508251:1
position: 8508251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8541350-8541443:1:exon

position:8541350:1
position: 8541350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8541443:1
position: 8541443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8559368-8559518:1:exon

position:8559368:1
position: 8559368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8559518:1
position: 8559518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8745346-8745459:1:exon

position:8745346:1
position: 8745346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8745459:1
position: 8745459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8788863-8788937:1:exon

position:8788863:1
position: 8788863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8788937:1
position: 8788937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8794405-8794530:1:exon

position:8794405:1
position: 8794405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8794530:1
position: 8794530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8795347-8795490:1:exon

position:8795347:1
position: 8795347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8795490:1
position: 8795490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8871726-8871767:1:exon

position:8871726:1
position: 8871726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8871767:1
position: 8871767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8928409-8928537:1:exon

position:8928409:1
position: 8928409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8928537:1
position: 8928537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9042084-9042176:1:exon

position:9042084:1
position: 9042084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9042176:1
position: 9042176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9042365-9042651:1:exon

position:9042365:1
position: 9042365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105942406
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC105942406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-activating protein 1-like isoform X1
translation: MKVSSPRNEVEALRAMATMKSSCQYPFPVTLYVPNVPEGSVRIIEQSSNVEIASFPIYKVLFCARGHDGTAESGCFAFTESSHGSEEFQIHVFSCEIKEAVSRILYSFCTAFKRSSRQVSDVKDSIMPTPDSDVFTFSVSLEVKEDDGKGNFSPVPKDRDKFYFKLKQGIEKKVVITVQQLSNKELAIERCFGMLLSPGRSVKNSDMHLLDMESMGKSCDGRAYVITGMWNPNAPIFLALNEETPKDKRVYMTVAVDMVVTEVLEPVRFLLETVVRVYPANERFWYFSRKTFTETFFMRLKQSEGKGHSSTGDAIYEVVSLQRESDREEPVTPASGGAPSSPQEDEAEEESDSELSSGTGGVSKDCPEKILDSWGELLGRWHSNLGTRPKGLPALVKSGVPEALRAEVWQLLADCHDNQSMLDTYRILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYSVFDEDIGYCQGQSFLAAVLLLHMPEEQAFCVLVKIMCKYGLRDLYRNNFEILHCKFYQLERLMQEQLPDLHSHFSDLNLEAHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGLNIIFHVALALLKTSKEDLLQADFEGALKFFRVQLPKRYRAEENARRLMEQACNIKVPTKKLKKYEKEYQTMRESQLQQEDPMDRYKFVYF
SIO_010081: LOC105942406
subclass of: SO_0000673
so part of: LOC105942406
location: join(8432265..8432389,8442046..8442220,8460049..8460206,8461608..8461718,8475421..8475487,8477541..8477643,8481110..8481276,8508110..8508251,8541350..8541443,8559368..8559518,8745346..8745459,8788863..8788937,8794405..8794530,8795347..8795490,8871726..8871767,8928409..8928537,9042084..9042176,9042365..9042379)
location: region:8432265-9042379:1
so has part: feature:8432265-8432389:1:exon
so has part: feature:8442046-8442220:1:exon
so has part: feature:8460049-8460206:1:exon
so has part: feature:8461608-8461718:1:exon
so has part: feature:8475421-8475487:1:exon
so has part: feature:8477541-8477643:1:exon
so has part: feature:8481110-8481276:1:exon
so has part: feature:8508110-8508251:1:exon
so has part: feature:8541350-8541443:1:exon
so has part: feature:8559368-8559518:1:exon
so has part: feature:8745346-8745459:1:exon
so has part: feature:8788863-8788937:1:exon
so has part: feature:8794405-8794530:1:exon
so has part: feature:8795347-8795490:1:exon
so has part: feature:8871726-8871767:1:exon
so has part: feature:8928409-8928537:1:exon
so has part: feature:9042084-9042176:1:exon
so has part: feature:9042365-9042379:1:exon

XP_036353533.1
type: Protein
SIO_000068: ncbiprotein

position:8432265:1
position: 8432265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9042379:1
position: 9042379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8432265-8432389:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8442046-8442220:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8460049-8460206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8461608-8461718:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8475421-8475487:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8477541-8477643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8481110-8481276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8508110-8508251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8541350-8541443:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8559368-8559518:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8745346-8745459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8788863-8788937:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8794405-8794530:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8795347-8795490:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8871726-8871767:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8928409-8928537:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9042084-9042176:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9042365-9042379:1:exon

GPR52
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: GPR52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8616357..8617442
location: region:8616357-8617442:1
so has part: feature:8616357-8617442:1:exon
subclass of: SO_0000010

101526273
type: Gene
SIO_000068: ncbigene

position:8616357:1
position: 8616357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8617442:1
position: 8617442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8616357-8617442:1:exon

GPR52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GPR52
product: G protein-coupled receptor 52
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 8 Proteins
transcript id: XM_004596279.1
SIO_010081: GPR52
subclass of: SO_0000673
so part of: GPR52
location: 8616357..8617442
location: region:8616357-8617442:1
so has part: feature:8616357-8617442:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8616357-8617442:1:exon

GPR52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GPR52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 52
translation: MNESKWMEWRTLNLSTGLVNVSEHHSCPLGFGYYGTVDVCIFETIVIVLLTFLIIAGNLTVIFVFHCAPLLHHYTTSYFIQTMAYADLFVGVSCLVPTLSLLHYSTGVHESLTCQVFGYIISVLKSVSMACLACISVDRYLAITKPLSYNQLVTPCRLRVCIVLIWIYSCLIFLPSFFGWGKPGFHGDIFEWCATSWLTSAYFTGFIVCLLYAPAAFVVCFTYFHIFRICRQHTKEINDRRARFPSHKVDASRETGHSPDRRYAMVLFRITSVFYMLWLPYIIYFLLESSRVLDNPTLSFLTTWLAISNSFCNCVIYSLSNSVFRLGLRRLSETMCTSCLCVKDREVQDPKPRKRANSCSI
SIO_010081: GPR52
subclass of: SO_0000673
so part of: GPR52
location: 8616357..8617442
location: region:8616357-8617442:1
so has part: feature:8616357-8617442:1:exon

XP_004596336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8616357-8617442:1:exon

LOC118760395
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760395
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8636112..8636218)
location: region:8636112-8636218:-1
so has part: feature:8636112-8636218:-1:exon
subclass of: SO_0000623

118760395
type: Gene
SIO_000068: ncbigene

position:8636112:-1
position: 8636112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8636218:-1
position: 8636218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8636112-8636218:-1:exon

LOC118760395
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118760395
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996759.1
SIO_010081: LOC118760395
subclass of: SO_0000673
so part of: LOC118760395
location: complement(8636112..8636218)
location: region:8636112-8636218:-1
so has part: feature:8636112-8636218:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8636112-8636218:-1:exon

LOC118760396
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760396
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 8804886..8804988
location: region:8804886-8804988:1
so has part: feature:8804886-8804988:1:exon
subclass of: SO_0000623

118760396
type: Gene
SIO_000068: ncbigene

position:8804886:1
position: 8804886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8804988:1
position: 8804988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8804886-8804988:1:exon

LOC118760396
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118760396
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996760.1
SIO_010081: LOC118760396
subclass of: SO_0000673
so part of: LOC118760396
location: 8804886..8804988
location: region:8804886-8804988:1
so has part: feature:8804886-8804988:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8804886-8804988:1:exon

LOC105942406
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC105942406
product: rab GTPase-activating protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012930111.1
SIO_010081: LOC105942406
subclass of: SO_0000673
so part of: LOC105942406
location: join(8976640..8976770,8979563..8979758,9042084..9042176,9042365..9042651)
location: region:8976640-9042651:1
so has part: feature:8976640-8976770:1:exon
so has part: feature:8979563-8979758:1:exon
so has part: feature:9042084-9042176:1:exon
so has part: feature:9042365-9042651:1:exon

position:8976640:1
position: 8976640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8976640-8976770:1:exon

position:8976770:1
position: 8976770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8979563-8979758:1:exon

position:8979563:1
position: 8979563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8979758:1
position: 8979758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9042084-9042176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9042365-9042651:1:exon

LOC105942406
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC105942406
product: rab GTPase-activating protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012930109.1
SIO_010081: LOC105942406
subclass of: SO_0000673
so part of: LOC105942406
location: join(8976653..8976770,8979066..8979758,9042084..9042176,9042365..9042651)
location: region:8976653-9042651:1
so has part: feature:8976653-8976770:1:exon
so has part: feature:8979066-8979758:1:exon
so has part: feature:9042084-9042176:1:exon
so has part: feature:9042365-9042651:1:exon

position:8976653:1
position: 8976653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8976653-8976770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8979066-8979758:1:exon

position:8979066:1
position: 8979066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9042084-9042176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9042365-9042651:1:exon

LOC105942406
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC105942406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105942406 isoform X2
translation: MMEEVSILVAYDAHVFSQLHDEDFLSSLVAVSKPRSLVPTKKLKKYEKEYQTMRESQLQQEDPMDRYKFVYF
SIO_010081: LOC105942406
subclass of: SO_0000673
so part of: LOC105942406
location: join(8979648..8979758,9042084..9042176,9042365..9042379)
location: region:8979648-9042379:1
so has part: feature:8979648-8979758:1:exon
so has part: feature:9042084-9042176:1:exon
so has part: feature:9042365-9042379:1:exon

XP_012785563.1
type: Protein
SIO_000068: ncbiprotein

position:8979648:1
position: 8979648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8979648-8979758:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9042084-9042176:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9042365-9042379:1:exon

LOC105942406
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC105942406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105942406 isoform X2
translation: MMEEVSILVAYDAHVFSQLHDEDFLSSLVAVSKPRSLVPTKKLKKYEKEYQTMRESQLQQEDPMDRYKFVYF
SIO_010081: LOC105942406
subclass of: SO_0000673
so part of: LOC105942406
location: join(8979648..8979758,9042084..9042176,9042365..9042379)
location: region:8979648-9042379:1
so has part: feature:8979648-8979758:1:exon
so has part: feature:9042084-9042176:1:exon
so has part: feature:9042365-9042379:1:exon

XP_012785565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8979648-8979758:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9042084-9042176:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9042365-9042379:1:exon

LOC101532086
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101532086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9050190..9074006
location: region:9050190-9074006:1
so has part: feature:9050190-9074006:1:exon
subclass of: SO_0000010

101532086
type: Gene
SIO_000068: ncbigene

position:9050190:1
position: 9050190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9074006:1
position: 9074006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9050190-9074006:1:exon

LOC101532086
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101532086
product: rab GTPase-activating protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_012930091.1
SIO_010081: LOC101532086
subclass of: SO_0000673
so part of: LOC101532086
location: join(9050190..9050228,9054067..9054177,9063841..9063945,9068111..9068194,9072835..9073032,9073851..9074006)
location: region:9050190-9074006:1
so has part: feature:9050190-9050228:1:exon
so has part: feature:9054067-9054177:1:exon
so has part: feature:9063841-9063945:1:exon
so has part: feature:9068111-9068194:1:exon
so has part: feature:9072835-9073032:1:exon
so has part: feature:9073851-9074006:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9050190-9050228:1:exon

position:9050228:1
position: 9050228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9054067-9054177:1:exon

position:9054067:1
position: 9054067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9054177:1
position: 9054177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9063841-9063945:1:exon

position:9063841:1
position: 9063841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9063945:1
position: 9063945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9068111-9068194:1:exon

position:9068111:1
position: 9068111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9068194:1
position: 9068194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9072835-9073032:1:exon

position:9072835:1
position: 9072835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9073032:1
position: 9073032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9073851-9074006:1:exon

position:9073851:1
position: 9073851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101532086
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101532086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-activating protein 1-like
translation: MIESGSWSMTFEERENRRLQEASMRLEQENDDLAHELVTSKIALRNDLDQAEDKADVLNKELLLTKQRLVETEEEKRKQEEETAQLKEVFRKQLEKAEYEIKKTTAIIAEYKQGKMMACKHCSDVLSKEGTLKVAAVSRADQGVESDDEKDSLKKQLREMELELAQTKLQLVEAKCKIQELEHQRGALMNEIQAAKNSWFSKTLNSIKTAAGTQPLQPPAAGQPAKESST
SIO_010081: LOC101532086
subclass of: SO_0000673
so part of: LOC101532086
location: join(9050190..9050228,9054067..9054177,9063841..9063945,9068111..9068194,9072835..9073032,9073851..9074006)
location: region:9050190-9074006:1
so has part: feature:9050190-9050228:1:exon
so has part: feature:9054067-9054177:1:exon
so has part: feature:9063841-9063945:1:exon
so has part: feature:9068111-9068194:1:exon
so has part: feature:9072835-9073032:1:exon
so has part: feature:9073851-9074006:1:exon

XP_012785545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9050190-9050228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9054067-9054177:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9063841-9063945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9068111-9068194:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9072835-9073032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9073851-9074006:1:exon

LOC101526028
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101526028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9081102..9092388
location: region:9081102-9092388:1
so has part: feature:9081102-9092388:1:exon
subclass of: SO_0000010

101526028
type: Gene
SIO_000068: ncbigene

position:9081102:1
position: 9081102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9092388:1
position: 9092388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9081102-9092388:1:exon

LOC101526028
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101526028
product: calcyclin binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004596278.2
SIO_010081: LOC101526028
subclass of: SO_0000673
so part of: LOC101526028
location: join(9081102..9081214,9084973..9085180,9088273..9088369,9088928..9089027,9089867..9089964,9091642..9092388)
location: region:9081102-9092388:1
so has part: feature:9081102-9081214:1:exon
so has part: feature:9084973-9085180:1:exon
so has part: feature:9088273-9088369:1:exon
so has part: feature:9088928-9089027:1:exon
so has part: feature:9089867-9089964:1:exon
so has part: feature:9091642-9092388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9081102-9081214:1:exon

position:9081214:1
position: 9081214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9084973-9085180:1:exon

position:9084973:1
position: 9084973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9085180:1
position: 9085180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9088273-9088369:1:exon

position:9088273:1
position: 9088273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9088369:1
position: 9088369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9088928-9089027:1:exon

position:9088928:1
position: 9088928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9089027:1
position: 9089027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9089867-9089964:1:exon

position:9089867:1
position: 9089867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9089964:1
position: 9089964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9091642-9092388:1:exon

position:9091642:1
position: 9091642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101526028
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101526028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcyclin-binding protein
translation: MTSALEELQKDLEEVKVLLEKSTRKRVRDALTAEKAKIETEVRNKMQQKPQERAEPGDSDKPAPVTAGYTVKISNYGWDQSEKFVKIYITLTGVHQVPLEDVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKAENTRWDYLTQVEKECKEKEKPSYDAEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESREKQAKGDTEF
SIO_010081: LOC101526028
subclass of: SO_0000673
so part of: LOC101526028
location: join(9081194..9081214,9084973..9085180,9088273..9088369,9088928..9089027,9089867..9089964,9091642..9091798)
location: region:9081194-9091798:1
so has part: feature:9081194-9081214:1:exon
so has part: feature:9084973-9085180:1:exon
so has part: feature:9088273-9088369:1:exon
so has part: feature:9088928-9089027:1:exon
so has part: feature:9089867-9089964:1:exon
so has part: feature:9091642-9091798:1:exon

XP_004596335.1
type: Protein
SIO_000068: ncbiprotein

position:9081194:1
position: 9081194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9091798:1
position: 9091798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9081194-9081214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9084973-9085180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9088273-9088369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9088928-9089027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9089867-9089964:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9091642-9091798:1:exon

MRPS14
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: MRPS14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9100832..9114896)
location: region:9100832-9114896:-1
so has part: feature:9100832-9114896:-1:exon
subclass of: SO_0000010

101525784
type: Gene
SIO_000068: ncbigene

position:9100832:-1
position: 9100832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9114896:-1
position: 9114896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9100832-9114896:-1:exon

MRPS14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MRPS14
product: mitochondrial ribosomal protein S14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004596277.3
SIO_010081: MRPS14
subclass of: SO_0000673
so part of: MRPS14
location: complement(join(9100832..9101244,9109989..9110147,9114849..9114896))
location: region:9100832-9114896:-1
so has part: feature:9114849-9114896:-1:exon
so has part: feature:9109989-9110147:-1:exon
so has part: feature:9100832-9101244:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9114849-9114896:-1:exon

position:9114849:-1
position: 9114849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9109989-9110147:-1:exon

position:9109989:-1
position: 9109989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9110147:-1
position: 9110147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9100832-9101244:-1:exon

position:9101244:-1
position: 9101244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPS14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MRPS14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S14, mitochondrial
translation: MAASTLGSLLRALRQVSQLSASPQVRGYYVDWRMLRDVKRRKLAYEYADERLRINSLRKNTILPKALQEVADEEIAALPRDSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHLADHGQLSGVQRAIW
SIO_010081: MRPS14
subclass of: SO_0000673
so part of: MRPS14
location: complement(join(9101062..9101244,9109989..9110147,9114849..9114893))
location: region:9101062-9114893:-1
so has part: feature:9114849-9114893:-1:exon
so has part: feature:9109989-9110147:-1:exon
so has part: feature:9101062-9101244:-1:exon

XP_004596334.1
type: Protein
SIO_000068: ncbiprotein

position:9101062:-1
position: 9101062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9114893:-1
position: 9114893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9114849-9114893:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9109989-9110147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9101062-9101244:-1:exon

TNN
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TNN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9150100..9213633
location: region:9150100-9213633:1
so has part: feature:9150100-9213633:1:exon
subclass of: SO_0000010

101531844
type: Gene
SIO_000068: ncbigene

position:9150100:1
position: 9150100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9213633:1
position: 9213633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9150100-9213633:1:exon

TNN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TNN
product: tenascin N
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_036497630.1
SIO_010081: TNN
subclass of: SO_0000673
so part of: TNN
location: join(9150100..9150508,9151867..9152241,9152730..9152993,9156021..9156206,9157224..9157313,9166632..9166895,9171682..9171945,9172524..9172769,9176222..9176482,9179586..9179849,9181372..9181449,9185224..9185676,9195599..9195729,9196669..9196801,9197182..9197333,9204388..9204484,9205147..9205314,9211340..9211503,9213475..9213633)
location: region:9150100-9213633:1
so has part: feature:9150100-9150508:1:exon
so has part: feature:9151867-9152241:1:exon
so has part: feature:9152730-9152993:1:exon
so has part: feature:9156021-9156206:1:exon
so has part: feature:9157224-9157313:1:exon
so has part: feature:9166632-9166895:1:exon
so has part: feature:9171682-9171945:1:exon
so has part: feature:9172524-9172769:1:exon
so has part: feature:9176222-9176482:1:exon
so has part: feature:9179586-9179849:1:exon
so has part: feature:9181372-9181449:1:exon
so has part: feature:9185224-9185676:1:exon
so has part: feature:9195599-9195729:1:exon
so has part: feature:9196669-9196801:1:exon
so has part: feature:9197182-9197333:1:exon
so has part: feature:9204388-9204484:1:exon
so has part: feature:9205147-9205314:1:exon
so has part: feature:9211340-9211503:1:exon
so has part: feature:9213475-9213633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9150100-9150508:1:exon

position:9150508:1
position: 9150508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9151867-9152241:1:exon

position:9151867:1
position: 9151867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9152241:1
position: 9152241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9152730-9152993:1:exon

position:9152730:1
position: 9152730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9152993:1
position: 9152993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9156021-9156206:1:exon

position:9156021:1
position: 9156021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9156206:1
position: 9156206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9157224-9157313:1:exon

position:9157224:1
position: 9157224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9157313:1
position: 9157313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9166632-9166895:1:exon

position:9166632:1
position: 9166632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9166895:1
position: 9166895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9171682-9171945:1:exon

position:9171682:1
position: 9171682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9171945:1
position: 9171945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9172524-9172769:1:exon

position:9172524:1
position: 9172524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9172769:1
position: 9172769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9176222-9176482:1:exon

position:9176222:1
position: 9176222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9176482:1
position: 9176482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9179586-9179849:1:exon

position:9179586:1
position: 9179586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9179849:1
position: 9179849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9181372-9181449:1:exon

position:9181372:1
position: 9181372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9181449:1
position: 9181449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9185224-9185676:1:exon

position:9185224:1
position: 9185224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9185676:1
position: 9185676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9195599-9195729:1:exon

position:9195599:1
position: 9195599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9195729:1
position: 9195729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9196669-9196801:1:exon

position:9196669:1
position: 9196669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9196801:1
position: 9196801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9197182-9197333:1:exon

position:9197182:1
position: 9197182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9197333:1
position: 9197333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9204388-9204484:1:exon

position:9204388:1
position: 9204388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9204484:1
position: 9204484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9205147-9205314:1:exon

position:9205147:1
position: 9205147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9205314:1
position: 9205314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9211340-9211503:1:exon

position:9211340:1
position: 9211340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9211503:1
position: 9211503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9213475-9213633:1:exon

position:9213475:1
position: 9213475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TNN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenascin-N
translation: MGSQRMFSLPLGLLLGSVLLVASAPATPEPHSCSSKEQQVTLSHTYKIDVPKSALVQVEADPQPLSDEGTSLLALGEAGEEQNIIFRHNIRLQTPQKDCELADSVQDLLARVKKLEEEMAEMKEQCSPQRCCQGASDLSRHCSGHGTFSLETCTCRCDQGWEGSDCERPSCPGACSGHGRCEDGRCLCDEPYVGADCAYSACPEDCSGHGVCVQGVCQCYEDFTSEDCSERRCPGDCSGHGFCDTGECYCEEGFIGPDCAQVIAPQGLQLLKSTESSLLVSWEPTSQVDHYLLSYYPLGKELSAKQLQVPKEQHSYEIPGLQSGTKYIVTLRNVKKDVSSSPQHLLATTDHAVLGTAWVTEETETSLDVEWENPLTEVDYYKLQYGPLTGHEVDEVIVPKSSDPKSRYDITGLQPGTEYKITVIPMRGDLEGKPILLNGRTEIDGPTNVVTDRVTEDTAAVSWDPVKADIDKYVVRYISPEGESKETAVPKDQSSTVLQGLKPGEEYKIYVWAEKGSQGSKKADTKALTEIDSPTNLVTDRVTEDTATISWDPVQADIDKYMVRYTSADGDSKEIPVGKEQSSTILTGLRPGVEYKVYVWAQKGDQESKKADTEAPTDIDSPKNLVTSQVTENTATISWDPVQADIDKYIVHYTSADGETKEFSVGKKTSTVLTGLRPGVEYTVDVWAQKGSQESKKANNIDSPKNLVTSQVTENTVTISWDPVQADIDRYMVHYTSADGETRKFPVGKKTSTVLTGLRPGVEYTVDVWAQKGSQESKKANTKAPTEIDSPKNLVTNRVTEDTATISWDPVRANIDKYVVRYTSADGESKEIPVGKERSSTILMGLRPGVEYKVYVWAQKGTQESKKANTEALTGVEYTVDVWAQKGSQESKKANTKAPTDIDSPKNLVASQVTENTVTISWDPVQADIDRYMVHYTSADGETKEFLVKKEKTSTILTGLRPGVEYTVDVWAQKGSQESKKANTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRPGVEYTVDVWAQKGSQESKKANTKAPTEIDPPKNFHSFGVTQSGGALSWLPPSAQIDGYILTYELPNGTIKEVQLRRGEQSFEVQDLEHGVTYPFFLVAFKGDRRSKIVSTILSTVNAVFPHPSDCTQVQQNSNASSGLYTIYLNSDPKQPLQVYCDMETDGGGWIVFQRRNTGQLDFFKRWRSYVEGFGDPMQEFWIGLDKLHNLTTATPTRYEVRVDLETFNESAYAVYDFFQVASSKERYKLTVGKYNGTAGDALSYHNGWKFTTFDRDNDIALSNCALTHHGGWWYKNCHLANPNGKYGEAKHSEGVNWEPWKGHEFSIPYVELKIRPQGYKPKSDSRKSGQGRKKLAPGGGTTRMF
SIO_010081: TNN
subclass of: SO_0000673
so part of: TNN
location: join(9150100..9150508,9151867..9152241,9152730..9152993,9156021..9156206,9157224..9157313,9166632..9166895,9171682..9171945,9172524..9172769,9176222..9176482,9179586..9179849,9181372..9181449,9185224..9185676,9195599..9195729,9196669..9196801,9197182..9197333,9204388..9204484,9205147..9205314,9211340..9211503,9213475..9213633)
location: region:9150100-9213633:1
so has part: feature:9150100-9150508:1:exon
so has part: feature:9151867-9152241:1:exon
so has part: feature:9152730-9152993:1:exon
so has part: feature:9156021-9156206:1:exon
so has part: feature:9157224-9157313:1:exon
so has part: feature:9166632-9166895:1:exon
so has part: feature:9171682-9171945:1:exon
so has part: feature:9172524-9172769:1:exon
so has part: feature:9176222-9176482:1:exon
so has part: feature:9179586-9179849:1:exon
so has part: feature:9181372-9181449:1:exon
so has part: feature:9185224-9185676:1:exon
so has part: feature:9195599-9195729:1:exon
so has part: feature:9196669-9196801:1:exon
so has part: feature:9197182-9197333:1:exon
so has part: feature:9204388-9204484:1:exon
so has part: feature:9205147-9205314:1:exon
so has part: feature:9211340-9211503:1:exon
so has part: feature:9213475-9213633:1:exon

XP_036353523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9150100-9150508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9151867-9152241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9152730-9152993:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9156021-9156206:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9157224-9157313:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9166632-9166895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9171682-9171945:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9172524-9172769:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9176222-9176482:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9179586-9179849:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9181372-9181449:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9185224-9185676:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9195599-9195729:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9196669-9196801:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9197182-9197333:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9204388-9204484:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9205147-9205314:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9211340-9211503:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9213475-9213633:1:exon

KIAA0040
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: KIAA0040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9223940..9224236)
location: region:9223940-9224236:-1
so has part: feature:9223940-9224236:-1:exon
subclass of: SO_0000010

105942405
type: Gene
SIO_000068: ncbigene

position:9223940:-1
position: 9223940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9224236:-1
position: 9224236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9223940-9224236:-1:exon

KIAA0040
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: KIAA0040
product: KIAA0040 ortholog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_012930107.1
SIO_010081: KIAA0040
subclass of: SO_0000673
so part of: KIAA0040
location: complement(9223940..9224236)
location: region:9223940-9224236:-1
so has part: feature:9223940-9224236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9223940-9224236:-1:exon

KIAA0040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: KIAA0040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA0040 homolog
translation: MEKISAFFSSIWNTILAKHQEGLFNTICLGILLGLPLLVVLTLIFICCHCCWSRPGQGSRQPEANKKKKKKKKKDEEDLWISAQPKLLQMEKRPSLPV
SIO_010081: KIAA0040
subclass of: SO_0000673
so part of: KIAA0040
location: complement(9223940..9224236)
location: region:9223940-9224236:-1
so has part: feature:9223940-9224236:-1:exon

XP_012785561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9223940-9224236:-1:exon

TNR
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TNR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9362166..9437632)
location: region:9362166-9437632:-1
so has part: feature:9362166-9437632:-1:exon
subclass of: SO_0000010

101525305
type: Gene
SIO_000068: ncbigene

position:9362166:-1
position: 9362166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9437632:-1
position: 9437632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9362166-9437632:-1:exon

TNR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TNR
product: tenascin R, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004596276.1
SIO_010081: TNR
subclass of: SO_0000673
so part of: TNR
location: complement(join(9362166..9362285,9363113..9363276,9367089..9367250,9370735..9370831,9372133..9372284,9386980..9387112,9388000..9388130,9388775..9388918,9392420..9392539,9394747..9394893,9395742..9395861,9397264..9397533,9398011..9398274,9398850..9398939,9409368..9409553,9415152..9415421,9419723..9419873,9424994..9425109,9427763..9428026,9433923..9434399,9437134..9437632))
location: region:9362166-9437632:-1
so has part: feature:9437134-9437632:-1:exon
so has part: feature:9433923-9434399:-1:exon
so has part: feature:9427763-9428026:-1:exon
so has part: feature:9424994-9425109:-1:exon
so has part: feature:9419723-9419873:-1:exon
so has part: feature:9415152-9415421:-1:exon
so has part: feature:9409368-9409553:-1:exon
so has part: feature:9398850-9398939:-1:exon
so has part: feature:9398011-9398274:-1:exon
so has part: feature:9397264-9397533:-1:exon
so has part: feature:9395742-9395861:-1:exon
so has part: feature:9394747-9394893:-1:exon
so has part: feature:9392420-9392539:-1:exon
so has part: feature:9388775-9388918:-1:exon
so has part: feature:9388000-9388130:-1:exon
so has part: feature:9386980-9387112:-1:exon
so has part: feature:9372133-9372284:-1:exon
so has part: feature:9370735-9370831:-1:exon
so has part: feature:9367089-9367250:-1:exon
so has part: feature:9363113-9363276:-1:exon
so has part: feature:9362166-9362285:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9437134-9437632:-1:exon

position:9437134:-1
position: 9437134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9433923-9434399:-1:exon

position:9433923:-1
position: 9433923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9434399:-1
position: 9434399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9427763-9428026:-1:exon

position:9427763:-1
position: 9427763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9428026:-1
position: 9428026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9424994-9425109:-1:exon

position:9424994:-1
position: 9424994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9425109:-1
position: 9425109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9419723-9419873:-1:exon

position:9419723:-1
position: 9419723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9419873:-1
position: 9419873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9415152-9415421:-1:exon

position:9415152:-1
position: 9415152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9415421:-1
position: 9415421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9409368-9409553:-1:exon

position:9409368:-1
position: 9409368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9409553:-1
position: 9409553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9398850-9398939:-1:exon

position:9398850:-1
position: 9398850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9398939:-1
position: 9398939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9398011-9398274:-1:exon

position:9398011:-1
position: 9398011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9398274:-1
position: 9398274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9397264-9397533:-1:exon

position:9397264:-1
position: 9397264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9397533:-1
position: 9397533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9395742-9395861:-1:exon

position:9395742:-1
position: 9395742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9395861:-1
position: 9395861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9394747-9394893:-1:exon

position:9394747:-1
position: 9394747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9394893:-1
position: 9394893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9392420-9392539:-1:exon

position:9392420:-1
position: 9392420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9392539:-1
position: 9392539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9388775-9388918:-1:exon

position:9388775:-1
position: 9388775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9388918:-1
position: 9388918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9388000-9388130:-1:exon

position:9388000:-1
position: 9388000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9388130:-1
position: 9388130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9386980-9387112:-1:exon

position:9386980:-1
position: 9386980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9387112:-1
position: 9387112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9372133-9372284:-1:exon

position:9372133:-1
position: 9372133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9372284:-1
position: 9372284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9370735-9370831:-1:exon

position:9370735:-1
position: 9370735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9370831:-1
position: 9370831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9367089-9367250:-1:exon

position:9367089:-1
position: 9367089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9367250:-1
position: 9367250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9363113-9363276:-1:exon

position:9363113:-1
position: 9363113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9363276:-1
position: 9363276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9362166-9362285:-1:exon

position:9362285:-1
position: 9362285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TNR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenascin-R isoform X1
translation: MGVDGETAALKNMLISVNLILLGSMLKPLECQLEVTTERVQGQAAEEEGGVSSYNASSKEQPVVFNHVYNINVPLDSLCSSGLEASAEQEVSDEDETLAEYTGQTSDHESQVTFTHRIHLPKKACPCAGSAQVLQELLSRIEMLEREVSVLRDQCNANCCPESAATGQLDYIPHCSGHGNFSLESCGCICHEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPADCSSRGLCVDGECVCEEPYTGEDCRELRCPEDCSGKGSCANGTCLCQEGYVGEDCGQRWCLNACSGRGHCQEGLCICEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQPMALGGLQLQQRVPGDWSGVTIAELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQGLQFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEYIVNVVALKEQVRSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRARVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSVSAVRGTNESDSTTTQFTTEIDAPKNLRVGARTATSLDLEWDNSEAEVQEYKLVYSTLAGEQYHEMTIPKSIGPTTRATLTNLVPGTEYGVGISAIMNAQRSVPATMNARTELDNPRDFMVTASSETSISLIWTKASGPIDHYRITFTPSSGIASEITVPKDRTSYTLTDLEPGAEYIISITAERGRQQSLEATVDAFTGFRPISHLHFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMMEVSLDATKRHAVLMGLQPATEYIVNLVAIHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVTVSWSPPVAAFDYYRVSYRPTQVGRLDSSVVPNTVTEFTVPRLYPATEYEISLNSVRGREESERICTLVHTAMDNPVGLVATNITPTEALLQWKAPMGEVESYVIILTHFAVAGETILVDGVSEEFQLVDLLPSTHYTVAMYATSGPLTSGTITTNFSTLLDPPTNLTASEVTRQSALISWQPPRGEIENYVLTYKSADGSRKELIVDAEDTWIRLEGLLENTDYTVLLQAAQDTSRSGITSTAFSTGGRMFPHPQDCAQHLMNGDTLSGVYTIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNLEDEFWLGLDSIHRITSQGRYELRVDMRDGQEAAFAYYDKFSVEDNRSLYKLRLGSYNGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPYNHRLAAGRKRRALRF
SIO_010081: TNR
subclass of: SO_0000673
so part of: TNR
location: complement(join(9362166..9362285,9363113..9363276,9367089..9367250,9370735..9370831,9372133..9372284,9386980..9387112,9388000..9388130,9388775..9388918,9392420..9392539,9394747..9394893,9395742..9395861,9397264..9397533,9398011..9398274,9398850..9398939,9409368..9409553,9415152..9415421,9419723..9419873,9424994..9425109,9427763..9428026,9433923..9434399,9437134..9437632))
location: region:9362166-9437632:-1
so has part: feature:9437134-9437632:-1:exon
so has part: feature:9433923-9434399:-1:exon
so has part: feature:9427763-9428026:-1:exon
so has part: feature:9424994-9425109:-1:exon
so has part: feature:9419723-9419873:-1:exon
so has part: feature:9415152-9415421:-1:exon
so has part: feature:9409368-9409553:-1:exon
so has part: feature:9398850-9398939:-1:exon
so has part: feature:9398011-9398274:-1:exon
so has part: feature:9397264-9397533:-1:exon
so has part: feature:9395742-9395861:-1:exon
so has part: feature:9394747-9394893:-1:exon
so has part: feature:9392420-9392539:-1:exon
so has part: feature:9388775-9388918:-1:exon
so has part: feature:9388000-9388130:-1:exon
so has part: feature:9386980-9387112:-1:exon
so has part: feature:9372133-9372284:-1:exon
so has part: feature:9370735-9370831:-1:exon
so has part: feature:9367089-9367250:-1:exon
so has part: feature:9363113-9363276:-1:exon
so has part: feature:9362166-9362285:-1:exon

XP_004596333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9437134-9437632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9433923-9434399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9427763-9428026:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9424994-9425109:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9419723-9419873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9415152-9415421:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9409368-9409553:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9398850-9398939:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9398011-9398274:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9397264-9397533:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9395742-9395861:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9394747-9394893:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9392420-9392539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9388775-9388918:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9388000-9388130:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9386980-9387112:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9372133-9372284:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9370735-9370831:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9367089-9367250:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9363113-9363276:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9362166-9362285:-1:exon

TNR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TNR
product: tenascin R, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036497638.1
SIO_010081: TNR
subclass of: SO_0000673
so part of: TNR
location: complement(join(9362166..9362285,9363113..9363276,9367089..9367250,9370735..9370831,9372133..9372284,9386980..9387112,9388000..9388130,9388775..9388918,9392420..9392539,9394747..9394893,9395742..9395861,9397264..9397533,9398011..9398274,9398850..9398939,9409368..9409553,9415152..9415421,9419723..9419873,9424994..9425109,9427763..9427922,9433923..9434003))
location: region:9362166-9434003:-1
so has part: feature:9433923-9434003:-1:exon
so has part: feature:9427763-9427922:-1:exon
so has part: feature:9424994-9425109:-1:exon
so has part: feature:9419723-9419873:-1:exon
so has part: feature:9415152-9415421:-1:exon
so has part: feature:9409368-9409553:-1:exon
so has part: feature:9398850-9398939:-1:exon
so has part: feature:9398011-9398274:-1:exon
so has part: feature:9397264-9397533:-1:exon
so has part: feature:9395742-9395861:-1:exon
so has part: feature:9394747-9394893:-1:exon
so has part: feature:9392420-9392539:-1:exon
so has part: feature:9388775-9388918:-1:exon
so has part: feature:9388000-9388130:-1:exon
so has part: feature:9386980-9387112:-1:exon
so has part: feature:9372133-9372284:-1:exon
so has part: feature:9370735-9370831:-1:exon
so has part: feature:9367089-9367250:-1:exon
so has part: feature:9363113-9363276:-1:exon
so has part: feature:9362166-9362285:-1:exon

position:9434003:-1
position: 9434003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9433923-9434003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9427763-9427922:-1:exon

position:9427922:-1
position: 9427922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9424994-9425109:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9419723-9419873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9415152-9415421:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9409368-9409553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9398850-9398939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9398011-9398274:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9397264-9397533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9395742-9395861:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9394747-9394893:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9392420-9392539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9388775-9388918:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9388000-9388130:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9386980-9387112:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9372133-9372284:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9370735-9370831:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9367089-9367250:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9363113-9363276:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9362166-9362285:-1:exon

TNR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TNR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenascin-R isoform X2
translation: MPAVGEDTARRGSASVRRATRALTAQQPMALGGLQLQQRVPGDWSGVTIAELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQGLQFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEYIVNVVALKEQVRSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRARVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSVSAVRGTNESDSTTTQFTTEIDAPKNLRVGARTATSLDLEWDNSEAEVQEYKLVYSTLAGEQYHEMTIPKSIGPTTRATLTNLVPGTEYGVGISAIMNAQRSVPATMNARTELDNPRDFMVTASSETSISLIWTKASGPIDHYRITFTPSSGIASEITVPKDRTSYTLTDLEPGAEYIISITAERGRQQSLEATVDAFTGFRPISHLHFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMMEVSLDATKRHAVLMGLQPATEYIVNLVAIHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVTVSWSPPVAAFDYYRVSYRPTQVGRLDSSVVPNTVTEFTVPRLYPATEYEISLNSVRGREESERICTLVHTAMDNPVGLVATNITPTEALLQWKAPMGEVESYVIILTHFAVAGETILVDGVSEEFQLVDLLPSTHYTVAMYATSGPLTSGTITTNFSTLLDPPTNLTASEVTRQSALISWQPPRGEIENYVLTYKSADGSRKELIVDAEDTWIRLEGLLENTDYTVLLQAAQDTSRSGITSTAFSTGGRMFPHPQDCAQHLMNGDTLSGVYTIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNLEDEFWLGLDSIHRITSQGRYELRVDMRDGQEAAFAYYDKFSVEDNRSLYKLRLGSYNGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPYNHRLAAGRKRRALRF
SIO_010081: TNR
subclass of: SO_0000673
so part of: TNR
location: complement(join(9362166..9362285,9363113..9363276,9367089..9367250,9370735..9370831,9372133..9372284,9386980..9387112,9388000..9388130,9388775..9388918,9392420..9392539,9394747..9394893,9395742..9395861,9397264..9397533,9398011..9398274,9398850..9398939,9409368..9409553,9415152..9415421,9419723..9419873,9424994..9425109,9427763..9427922,9433923..9434003))
location: region:9362166-9434003:-1
so has part: feature:9433923-9434003:-1:exon
so has part: feature:9427763-9427922:-1:exon
so has part: feature:9424994-9425109:-1:exon
so has part: feature:9419723-9419873:-1:exon
so has part: feature:9415152-9415421:-1:exon
so has part: feature:9409368-9409553:-1:exon
so has part: feature:9398850-9398939:-1:exon
so has part: feature:9398011-9398274:-1:exon
so has part: feature:9397264-9397533:-1:exon
so has part: feature:9395742-9395861:-1:exon
so has part: feature:9394747-9394893:-1:exon
so has part: feature:9392420-9392539:-1:exon
so has part: feature:9388775-9388918:-1:exon
so has part: feature:9388000-9388130:-1:exon
so has part: feature:9386980-9387112:-1:exon
so has part: feature:9372133-9372284:-1:exon
so has part: feature:9370735-9370831:-1:exon
so has part: feature:9367089-9367250:-1:exon
so has part: feature:9363113-9363276:-1:exon
so has part: feature:9362166-9362285:-1:exon

XP_036353531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9433923-9434003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9427763-9427922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9424994-9425109:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9419723-9419873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9415152-9415421:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9409368-9409553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9398850-9398939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9398011-9398274:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9397264-9397533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9395742-9395861:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9394747-9394893:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9392420-9392539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9388775-9388918:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9388000-9388130:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9386980-9387112:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9372133-9372284:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9370735-9370831:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9367089-9367250:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9363113-9363276:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9362166-9362285:-1:exon

COP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: COP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9930109..10094450)
location: region:9930109-10094450:-1
so has part: feature:9930109-10094450:-1:exon
subclass of: SO_0000010

101531619
type: Gene
SIO_000068: ncbigene

position:9930109:-1
position: 9930109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10094450:-1
position: 10094450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9930109-10094450:-1:exon

COP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: COP1
product: COP1 E3 ubiquitin ligase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930090.1
SIO_010081: COP1
subclass of: SO_0000673
so part of: COP1
location: complement(join(9930109..9930441,9932486..9932530,9950355..9950515,9951007..9951131,9954488..9954660,9977848..9978006,9978356..9978464,9980557..9980700,10006088..10006223,10010756..10010870,10030176..10030236,10038168..10038244,10039537..10039596,10055697..10055765,10060919..10061038,10061555..10061631,10067826..10067923,10071873..10071932,10087210..10087359,10094371..10094450))
location: region:9930109-10094450:-1
so has part: feature:10094371-10094450:-1:exon
so has part: feature:10087210-10087359:-1:exon
so has part: feature:10071873-10071932:-1:exon
so has part: feature:10067826-10067923:-1:exon
so has part: feature:10061555-10061631:-1:exon
so has part: feature:10060919-10061038:-1:exon
so has part: feature:10055697-10055765:-1:exon
so has part: feature:10039537-10039596:-1:exon
so has part: feature:10038168-10038244:-1:exon
so has part: feature:10030176-10030236:-1:exon
so has part: feature:10010756-10010870:-1:exon
so has part: feature:10006088-10006223:-1:exon
so has part: feature:9980557-9980700:-1:exon
so has part: feature:9978356-9978464:-1:exon
so has part: feature:9977848-9978006:-1:exon
so has part: feature:9954488-9954660:-1:exon
so has part: feature:9951007-9951131:-1:exon
so has part: feature:9950355-9950515:-1:exon
so has part: feature:9932486-9932530:-1:exon
so has part: feature:9930109-9930441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10094371-10094450:-1:exon

position:10094371:-1
position: 10094371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10087210-10087359:-1:exon

position:10087210:-1
position: 10087210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10087359:-1
position: 10087359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10071873-10071932:-1:exon

position:10071873:-1
position: 10071873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10071932:-1
position: 10071932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10067826-10067923:-1:exon

position:10067826:-1
position: 10067826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10067923:-1
position: 10067923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10061555-10061631:-1:exon

position:10061555:-1
position: 10061555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10061631:-1
position: 10061631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10060919-10061038:-1:exon

position:10060919:-1
position: 10060919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10061038:-1
position: 10061038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10055697-10055765:-1:exon

position:10055697:-1
position: 10055697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10055765:-1
position: 10055765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10039537-10039596:-1:exon

position:10039537:-1
position: 10039537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10039596:-1
position: 10039596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10038168-10038244:-1:exon

position:10038168:-1
position: 10038168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10038244:-1
position: 10038244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10030176-10030236:-1:exon

position:10030176:-1
position: 10030176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10030236:-1
position: 10030236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10010756-10010870:-1:exon

position:10010756:-1
position: 10010756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10010870:-1
position: 10010870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10006088-10006223:-1:exon

position:10006088:-1
position: 10006088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10006223:-1
position: 10006223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9980557-9980700:-1:exon

position:9980557:-1
position: 9980557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9980700:-1
position: 9980700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9978356-9978464:-1:exon

position:9978356:-1
position: 9978356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9978464:-1
position: 9978464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9977848-9978006:-1:exon

position:9977848:-1
position: 9977848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9978006:-1
position: 9978006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9954488-9954660:-1:exon

position:9954488:-1
position: 9954488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9954660:-1
position: 9954660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9951007-9951131:-1:exon

position:9951007:-1
position: 9951007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9951131:-1
position: 9951131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9950355-9950515:-1:exon

position:9950355:-1
position: 9950355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9950515:-1
position: 9950515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9932486-9932530:-1:exon

position:9932486:-1
position: 9932486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9932530:-1
position: 9932530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9930109-9930441:-1:exon

position:9930441:-1
position: 9930441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: COP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase COP1
translation: MTPPPSVTPTSGSEPGSDQITMMSIWGLSCAARPSAGAGGGGGGSGLSGGSRKRPLLAPLCNGLLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNTDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQGNLDLANVNLMLELLAQKKKQLEAESHAAQLQILMEFLRVARRNKREQLEQIQKELNVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKGTVCDFCSSLSSQFSFSCPSELKELSLCPISSFYSMLFWFCYFLDHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
SIO_010081: COP1
subclass of: SO_0000673
so part of: COP1
location: complement(join(9930424..9930441,9932486..9932530,9950355..9950515,9951007..9951131,9954488..9954660,9977848..9978006,9978356..9978464,9980557..9980700,10006088..10006223,10010756..10010870,10030176..10030236,10038168..10038244,10039537..10039596,10055697..10055765,10060919..10061038,10061555..10061631,10067826..10067923,10071873..10071932,10087210..10087359,10094371..10094450))
location: region:9930424-10094450:-1
so has part: feature:10094371-10094450:-1:exon
so has part: feature:10087210-10087359:-1:exon
so has part: feature:10071873-10071932:-1:exon
so has part: feature:10067826-10067923:-1:exon
so has part: feature:10061555-10061631:-1:exon
so has part: feature:10060919-10061038:-1:exon
so has part: feature:10055697-10055765:-1:exon
so has part: feature:10039537-10039596:-1:exon
so has part: feature:10038168-10038244:-1:exon
so has part: feature:10030176-10030236:-1:exon
so has part: feature:10010756-10010870:-1:exon
so has part: feature:10006088-10006223:-1:exon
so has part: feature:9980557-9980700:-1:exon
so has part: feature:9978356-9978464:-1:exon
so has part: feature:9977848-9978006:-1:exon
so has part: feature:9954488-9954660:-1:exon
so has part: feature:9951007-9951131:-1:exon
so has part: feature:9950355-9950515:-1:exon
so has part: feature:9932486-9932530:-1:exon
so has part: feature:9930424-9930441:-1:exon

XP_012785544.1
type: Protein
SIO_000068: ncbiprotein

position:9930424:-1
position: 9930424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10094371-10094450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10087210-10087359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10071873-10071932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10067826-10067923:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10061555-10061631:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10060919-10061038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10055697-10055765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10039537-10039596:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10038168-10038244:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10030176-10030236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10010756-10010870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10006088-10006223:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9980557-9980700:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9978356-9978464:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9977848-9978006:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9954488-9954660:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9951007-9951131:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9950355-9950515:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9932486-9932530:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9930424-9930441:-1:exon

LOC118760405
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760405
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(9942413..9942553)
location: region:9942413-9942553:-1
so has part: feature:9942413-9942553:-1:exon
subclass of: SO_0000979

118760405
type: Gene
SIO_000068: ncbigene

position:9942413:-1
position: 9942413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9942553:-1
position: 9942553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9942413-9942553:-1:exon

LOC118760405
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: guide_RNA
gene: LOC118760405
product: small Cajal body-specific RNA 3
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00565
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996769.1
SIO_010081: LOC118760405
subclass of: SO_0000673
so part of: LOC118760405
location: complement(9942413..9942553)
location: region:9942413-9942553:-1
so has part: feature:9942413-9942553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9942413-9942553:-1:exon

LOC101525066
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101525066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(10094977..10095626)
location: region:10094977-10095626:-1
so has part: feature:10094977-10095626:-1:exon

101525066
type: Gene
SIO_000068: ncbigene

position:10094977:-1
position: 10094977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10095626:-1
position: 10095626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10094977-10095626:-1:exon

LOC101525066
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101525066
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
pseudo: true
SIO_010081: LOC101525066
subclass of: SO_0000673
so part of: LOC101525066
location: complement(10094977..10095626)
location: region:10094977-10095626:-1
so has part: feature:10094977-10095626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10094977-10095626:-1:exon

PAPPA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PAPPA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10353747..10604213
location: region:10353747-10604213:1
so has part: feature:10353747-10604213:1:exon
subclass of: SO_0000010

101531385
type: Gene
SIO_000068: ncbigene

position:10353747:1
position: 10353747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10604213:1
position: 10604213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10353747-10604213:1:exon

PAPPA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PAPPA2
product: pappalysin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_036497631.1
SIO_010081: PAPPA2
subclass of: SO_0000673
so part of: PAPPA2
location: join(10353747..10354644,10381219..10382290,10444703..10444848,10458217..10458510,10459597..10459789,10470352..10470473,10475842..10476331,10479193..10479321,10487219..10487555,10489406..10489552,10505598..10505733,10505918..10506134,10528151..10528322,10532285..10532462,10534137..10534350,10550712..10550880,10552318..10552453,10554004..10554113,10563989..10564060,10601898..10601996,10604139..10604213)
location: region:10353747-10604213:1
so has part: feature:10353747-10354644:1:exon
so has part: feature:10381219-10382290:1:exon
so has part: feature:10444703-10444848:1:exon
so has part: feature:10458217-10458510:1:exon
so has part: feature:10459597-10459789:1:exon
so has part: feature:10470352-10470473:1:exon
so has part: feature:10475842-10476331:1:exon
so has part: feature:10479193-10479321:1:exon
so has part: feature:10487219-10487555:1:exon
so has part: feature:10489406-10489552:1:exon
so has part: feature:10505598-10505733:1:exon
so has part: feature:10505918-10506134:1:exon
so has part: feature:10528151-10528322:1:exon
so has part: feature:10532285-10532462:1:exon
so has part: feature:10534137-10534350:1:exon
so has part: feature:10550712-10550880:1:exon
so has part: feature:10552318-10552453:1:exon
so has part: feature:10554004-10554113:1:exon
so has part: feature:10563989-10564060:1:exon
so has part: feature:10601898-10601996:1:exon
so has part: feature:10604139-10604213:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10353747-10354644:1:exon

position:10354644:1
position: 10354644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10381219-10382290:1:exon

position:10381219:1
position: 10381219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10382290:1
position: 10382290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10444703-10444848:1:exon

position:10444703:1
position: 10444703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10444848:1
position: 10444848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10458217-10458510:1:exon

position:10458217:1
position: 10458217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10458510:1
position: 10458510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10459597-10459789:1:exon

position:10459597:1
position: 10459597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10459789:1
position: 10459789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10470352-10470473:1:exon

position:10470352:1
position: 10470352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10470473:1
position: 10470473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10475842-10476331:1:exon

position:10475842:1
position: 10475842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10476331:1
position: 10476331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10479193-10479321:1:exon

position:10479193:1
position: 10479193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10479321:1
position: 10479321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10487219-10487555:1:exon

position:10487219:1
position: 10487219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10487555:1
position: 10487555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10489406-10489552:1:exon

position:10489406:1
position: 10489406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10489552:1
position: 10489552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10505598-10505733:1:exon

position:10505598:1
position: 10505598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10505733:1
position: 10505733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10505918-10506134:1:exon

position:10505918:1
position: 10505918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10506134:1
position: 10506134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:10528151-10528322:1:exon

position:10528151:1
position: 10528151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10528322:1
position: 10528322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:10532285-10532462:1:exon

position:10532285:1
position: 10532285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10532462:1
position: 10532462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:10534137-10534350:1:exon

position:10534137:1
position: 10534137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10534350:1
position: 10534350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:10550712-10550880:1:exon

position:10550712:1
position: 10550712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10550880:1
position: 10550880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:10552318-10552453:1:exon

position:10552318:1
position: 10552318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10552453:1
position: 10552453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:10554004-10554113:1:exon

position:10554004:1
position: 10554004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10554113:1
position: 10554113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:10563989-10564060:1:exon

position:10563989:1
position: 10563989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10564060:1
position: 10564060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:10601898-10601996:1:exon

position:10601898:1
position: 10601898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10601996:1
position: 10601996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:10604139-10604213:1:exon

position:10604139:1
position: 10604139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAPPA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PAPPA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pappalysin-2
translation: MVCLQLLSFSLVVLAGCTLSAANAELGWTRKRSLAQWGHLNQVPLEGDRCWLGAKVRRPRAAPQTRLFGLYPSRPGSHLRPFPMREQGTQHAGHKKLDSEGKPLSLVLQHLTENAVGARSAVEQPAAPWVGDSPIGQSEPLRDDDTYLGNRGSKKFLGEVVPRESLAPAATITAAFPRPTEPKPEIQSKGWATSRRHRGVTKRQAEDAQGDPDPALLHLRPRPEPPQKPRISIQNGGEDPAWDAEPARPPGGLAVVYFSGRRERLLLRPEALAEIPREAFTVEAWVKPEGGQNNPAIITGVFDNCSHTGTDKGWALGIRSDKDKRRQDARFFFSLRTDRVKKATIVTGHSRYQPDKWTHLAATYDGRRMSLYVDGTRVASSTDQTGALYSPFMTSCRSLLLGGDTSEDRHYFRGHLGTLTFWSTALPQSHLQHSPQHPSGIEELSTLILTASFDPLKEQWVPFRDGKYPQLEVLQGAEPEPDILSPLQPPLCGQTACDNVEVISQYNGHRPLRGEKVIRYQVVNICDDGGLNPTVSEEQIQRQHRELNAAFNRYNISWQLSVHRVHNSTLRHRVVLVNCEPGKIGNDHCDPECEHPLTGYDGGDCRLQGRCYSWNRRDGLCHAECNNILNDFDDGDCCDPDVTDVHKTCFDPDSPNRAYMSVKELKETLQLNSTHFLNVYFATSVREDLAGAATWPWDKEAVSHLGGVVLNPAYYGMPGHTNIMIHEVGHVLGLYHVFKGVSERESCDDPCRETVPSMETGDLCADTAPTPKSKLCQDPEPANDTCGFTYFPGAPFRNYMSYTDDDCTDSFTPNQVARMHCYLDLVYQQWSQSRKPTPIPIPPVVIGQTGKSLTIHWLPPISGDVYDRITGSVCGSCAEDGTFRQYVHMASSRRVCDSSGYWTPEEAVGPPDVDQPCEPSLQAWSPELHLYHMNMTVPCPAEGCSLELRFQHPVHADTLTLWVTYLSMDPSQALFDTEILLEHQESVHLGPLDTFCDTPLTIKLHVEGKVSGVKVYTFDERMEIDAALLTSQPQSPLCSGCRPVRYQILREPAFASGLPVMVTHPCRKFTDTEVMPGQMYRYQVQAVAGAEIGEASPPLSHIHGAPYCGDGKVEKSVLPFVCWGVAGNERIQSYGLEKKYCEPSFSHEIQKHSFSATCCVLAGEPSLCYVHEGDGVCESFEKKSSITDCGLYTPKGHQDQWAAQAHSPYEDMEKCPIALVTGEPHSMICTSYHPDLPKQRPLTAWFPCVTNGSKSQNKGREKPEDNLQREDEVWLQVCFNRPGVATAVFIFLASDGLAPGGHQKPTVTVYLTDTSGNNHSLGIYELSCRQNPLVINVTYPTTSFFYNTVSVLLNFSSPLVGISAVALRTSSHVRLSAPTSCISAKDGQEHQGQSCVHQPCGDHDSCAPLLLDHTDMVNCTSHGPGHMECAITCQRGFVLQTTSGKYLRPIQKEILLTCASGYWDMVVSCTPLDCGIPDPSLVNYATFSCSEGTGYLKRCSISCVPPAKLQGRNPWLTCLGDGLWSLPEVYCKLECDTLPVIPNANLLLPHCLQRNHDVGTICRYECKPGYYVEPSVGSNSRSKFLKIQCLEDGVWERGSCVPVVCKPPAPVFEGMYECTNGFKLGSQCVLNCNQESERRPILCTEDGLWTQEFKLCENLQGECPPPPSELSFVEYKCEQGYGIGAVCSPSCVIPPSDPVLLPENVTVDTLEHWMEPVKVQSIMCTGQQRWHPDPLLIHCIQSCEPFQADGWCDTINNRAYCHYDGGDCCSSTLSSKKVIPFAADCDQDECTCRDPKAEENQ
SIO_010081: PAPPA2
subclass of: SO_0000673
so part of: PAPPA2
location: join(10353747..10354644,10381219..10382290,10444703..10444848,10458217..10458510,10459597..10459789,10470352..10470473,10475842..10476331,10479193..10479321,10487219..10487555,10489406..10489552,10505598..10505733,10505918..10506134,10528151..10528322,10532285..10532462,10534137..10534350,10550712..10550880,10552318..10552453,10554004..10554113,10563989..10564060,10601898..10601996,10604139..10604213)
location: region:10353747-10604213:1
so has part: feature:10353747-10354644:1:exon
so has part: feature:10381219-10382290:1:exon
so has part: feature:10444703-10444848:1:exon
so has part: feature:10458217-10458510:1:exon
so has part: feature:10459597-10459789:1:exon
so has part: feature:10470352-10470473:1:exon
so has part: feature:10475842-10476331:1:exon
so has part: feature:10479193-10479321:1:exon
so has part: feature:10487219-10487555:1:exon
so has part: feature:10489406-10489552:1:exon
so has part: feature:10505598-10505733:1:exon
so has part: feature:10505918-10506134:1:exon
so has part: feature:10528151-10528322:1:exon
so has part: feature:10532285-10532462:1:exon
so has part: feature:10534137-10534350:1:exon
so has part: feature:10550712-10550880:1:exon
so has part: feature:10552318-10552453:1:exon
so has part: feature:10554004-10554113:1:exon
so has part: feature:10563989-10564060:1:exon
so has part: feature:10601898-10601996:1:exon
so has part: feature:10604139-10604213:1:exon

XP_036353524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10353747-10354644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10381219-10382290:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10444703-10444848:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10458217-10458510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10459597-10459789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10470352-10470473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10475842-10476331:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10479193-10479321:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10487219-10487555:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10489406-10489552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10505598-10505733:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10505918-10506134:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10528151-10528322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10532285-10532462:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10534137-10534350:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10550712-10550880:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10552318-10552453:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10554004-10554113:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10563989-10564060:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10601898-10601996:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10604139-10604213:1:exon

ASTN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ASTN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10624563..10937162)
location: region:10624563-10937162:-1
so has part: feature:10624563-10937162:-1:exon
subclass of: SO_0000010

101524665
type: Gene
SIO_000068: ncbigene

position:10624563:-1
position: 10624563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10937162:-1
position: 10937162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10624563-10937162:-1:exon

ASTN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ASTN1
product: astrotactin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 7 Proteins
transcript id: XM_004596275.1
SIO_010081: ASTN1
subclass of: SO_0000673
so part of: ASTN1
location: complement(join(10624563..10624991,10629294..10629477,10637128..10637228,10642196..10642331,10643363..10643514,10646837..10646970,10653458..10653726,10694626..10694814,10696514..10696618,10703986..10704113,10705317..10705511,10708994..10709160,10717768..10717918,10718503..10718640,10725094..10725168,10770675..10770759,10778542..10778709,10779632..10779781,10784268..10784375,10785785..10785931,10787268..10787661,10818772..10818959,10936594..10937162))
location: region:10624563-10937162:-1
so has part: feature:10936594-10937162:-1:exon
so has part: feature:10818772-10818959:-1:exon
so has part: feature:10787268-10787661:-1:exon
so has part: feature:10785785-10785931:-1:exon
so has part: feature:10784268-10784375:-1:exon
so has part: feature:10779632-10779781:-1:exon
so has part: feature:10778542-10778709:-1:exon
so has part: feature:10770675-10770759:-1:exon
so has part: feature:10725094-10725168:-1:exon
so has part: feature:10718503-10718640:-1:exon
so has part: feature:10717768-10717918:-1:exon
so has part: feature:10708994-10709160:-1:exon
so has part: feature:10705317-10705511:-1:exon
so has part: feature:10703986-10704113:-1:exon
so has part: feature:10696514-10696618:-1:exon
so has part: feature:10694626-10694814:-1:exon
so has part: feature:10653458-10653726:-1:exon
so has part: feature:10646837-10646970:-1:exon
so has part: feature:10643363-10643514:-1:exon
so has part: feature:10642196-10642331:-1:exon
so has part: feature:10637128-10637228:-1:exon
so has part: feature:10629294-10629477:-1:exon
so has part: feature:10624563-10624991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10936594-10937162:-1:exon

position:10936594:-1
position: 10936594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10818772-10818959:-1:exon

position:10818772:-1
position: 10818772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10818959:-1
position: 10818959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10787268-10787661:-1:exon

position:10787268:-1
position: 10787268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10787661:-1
position: 10787661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10785785-10785931:-1:exon

position:10785785:-1
position: 10785785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10785931:-1
position: 10785931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10784268-10784375:-1:exon

position:10784268:-1
position: 10784268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10784375:-1
position: 10784375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10779632-10779781:-1:exon

position:10779632:-1
position: 10779632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10779781:-1
position: 10779781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10778542-10778709:-1:exon

position:10778542:-1
position: 10778542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10778709:-1
position: 10778709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10770675-10770759:-1:exon

position:10770675:-1
position: 10770675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10770759:-1
position: 10770759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10725094-10725168:-1:exon

position:10725094:-1
position: 10725094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10725168:-1
position: 10725168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10718503-10718640:-1:exon

position:10718503:-1
position: 10718503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10718640:-1
position: 10718640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10717768-10717918:-1:exon

position:10717768:-1
position: 10717768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10717918:-1
position: 10717918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10708994-10709160:-1:exon

position:10708994:-1
position: 10708994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10709160:-1
position: 10709160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:10705317-10705511:-1:exon

position:10705317:-1
position: 10705317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10705511:-1
position: 10705511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:10703986-10704113:-1:exon

position:10703986:-1
position: 10703986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10704113:-1
position: 10704113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:10696514-10696618:-1:exon

position:10696514:-1
position: 10696514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10696618:-1
position: 10696618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:10694626-10694814:-1:exon

position:10694626:-1
position: 10694626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10694814:-1
position: 10694814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:10653458-10653726:-1:exon

position:10653458:-1
position: 10653458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10653726:-1
position: 10653726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:10646837-10646970:-1:exon

position:10646837:-1
position: 10646837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10646970:-1
position: 10646970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:10643363-10643514:-1:exon

position:10643363:-1
position: 10643363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10643514:-1
position: 10643514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:10642196-10642331:-1:exon

position:10642196:-1
position: 10642196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10642331:-1
position: 10642331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:10637128-10637228:-1:exon

position:10637128:-1
position: 10637128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10637228:-1
position: 10637228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:10629294-10629477:-1:exon

position:10629294:-1
position: 10629294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10629477:-1
position: 10629477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:10624563-10624991:-1:exon

position:10624991:-1
position: 10624991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASTN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ASTN1
product: astrotactin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 Proteins
transcript id: XM_004596274.1
SIO_010081: ASTN1
subclass of: SO_0000673
so part of: ASTN1
location: complement(join(10624563..10624991,10629294..10629477,10637128..10637228,10642196..10642331,10643363..10643514,10646837..10646970,10653458..10653726,10694626..10694814,10696514..10696618,10703986..10704113,10705317..10705511,10708994..10709160,10717768..10717918,10718503..10718640,10725094..10725168,10770675..10770759,10778518..10778709,10779632..10779781,10784268..10784375,10785785..10785931,10787268..10787661,10818772..10818959,10936594..10937162))
location: region:10624563-10937162:-1
so has part: feature:10936594-10937162:-1:exon
so has part: feature:10818772-10818959:-1:exon
so has part: feature:10787268-10787661:-1:exon
so has part: feature:10785785-10785931:-1:exon
so has part: feature:10784268-10784375:-1:exon
so has part: feature:10779632-10779781:-1:exon
so has part: feature:10778518-10778709:-1:exon
so has part: feature:10770675-10770759:-1:exon
so has part: feature:10725094-10725168:-1:exon
so has part: feature:10718503-10718640:-1:exon
so has part: feature:10717768-10717918:-1:exon
so has part: feature:10708994-10709160:-1:exon
so has part: feature:10705317-10705511:-1:exon
so has part: feature:10703986-10704113:-1:exon
so has part: feature:10696514-10696618:-1:exon
so has part: feature:10694626-10694814:-1:exon
so has part: feature:10653458-10653726:-1:exon
so has part: feature:10646837-10646970:-1:exon
so has part: feature:10643363-10643514:-1:exon
so has part: feature:10642196-10642331:-1:exon
so has part: feature:10637128-10637228:-1:exon
so has part: feature:10629294-10629477:-1:exon
so has part: feature:10624563-10624991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10936594-10937162:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10818772-10818959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10787268-10787661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10785785-10785931:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10784268-10784375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10779632-10779781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10778518-10778709:-1:exon

position:10778518:-1
position: 10778518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10770675-10770759:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10725094-10725168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10718503-10718640:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10717768-10717918:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10708994-10709160:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10705317-10705511:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10703986-10704113:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10696514-10696618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10694626-10694814:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10653458-10653726:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10646837-10646970:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10643363-10643514:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10642196-10642331:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10637128-10637228:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10629294-10629477:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10624563-10624991:-1:exon

ASTN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ASTN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: astrotactin-1 isoform X2
translation: MALTRLCALLACCWGPAAVLATAAGDVDASKELECKLKSITVSALPFLRENDLSIMHSPSASEPKLLFSVRNDFPGEMVVVDDLENTELPYFVLEISGNTEDIPLVRWRQQWLENGTLLFHIHHQDGAPSLPGQDPTEEPQHESAEEELRILHISVMGGMIALLLSILCLVMILYTRRRWCKRRRVPQPQKSASAEAANEIHYIPSVLIGGHGRESLRNARVQGHNSSGTLSIRETPILDGYEYDITDLRHHLQRECMNGGEDFASQVTRTLDSLQGCNEKAGMDLTPGSDNAKLCLMNKYKDNIIATSPVDSNHQQATLLSHTSSSQRKRISNKARAGSAFLNPEGDSGTEAENDPQLAFYTDPSRSRRRSRVGSPRSPVNKTTLTLISITSCVVGLVCSSHVSCPLVVKITLHVPEHLIADGSRFILLEGSQLDASDWLNPAQVVLFSQQNSSGPWAMDLCARRLLDPCEHQCDPETGECLCYEGYMKDPVHKHLCIRNEWGTNQGPWPYTIFQRGFDLVLGEQPSDKIFRFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVMEDAVEVREELMTSSSFDSLEVLLDSFGPVRDCSKDNGGCSKNFRCISDRKLDSTGCVCPAGLSPMKDNSGCYDRHIGVDCSDGFNGGCEQLCLQQMAPFPDDPTLYNILMFCGCIEDYKLAVDGRSCQLITETCPEGGDCVESRELPMNQTLFGEMFFGYNNHSQEVAVGQVLKGTFRQNNFARGIDQQLPDGLVVATVPLENQCLEEISEPTPDPDFLTGMVNFSEVSGYPVLQHWKVRSVMYHIKLNQVAISQALNNALHSLDGATSRADFVALLDQFGNHYIQEAIYGFEESCSIWYPNKQVQRRLWLEYEDISKGNSPSDESEERERDPKMLTFPEYIASLSDSGTKRMAAGVRMECQSKGRCPSSCPLCHVTSSPDTPAEPVLLEVTRAAPIYELVTNNQTQRLLQEATMSSLWCSGTGDVIEDWCRCDSTAFGADGLPTCAPLPQPVLRLSTVHEPSSTLVVLEWEHSEPPIGVQIVDYLIRQEKVTDRMDHSKVETETVLSFVDDIISGAKSPCAMPSQVPDKQASTISLIIRCLEPDTIYMFTLWGVDNTGRRSRPSDVIVKTPCPVVDDIKAQEIADKIYNLFNGYTSGKEQQTAYNTLLDLGSPTLHRVLYHYNQHYESFGEFTWRCEDELGPRKAGLILSQLGDLSSWCNGLLQEPRISLRRSSLKYLGCRYSEIKPYGLDWSELSRDLRKTCEEQTLSIPYNDYGDSKDI
SIO_010081: ASTN1
subclass of: SO_0000673
so part of: ASTN1
location: complement(join(10624754..10624991,10629294..10629477,10637128..10637228,10642196..10642331,10643363..10643514,10646837..10646970,10653458..10653726,10694626..10694814,10696514..10696618,10703986..10704113,10705317..10705511,10708994..10709160,10717768..10717918,10718503..10718640,10725094..10725168,10770675..10770759,10778542..10778709,10779632..10779781,10784268..10784375,10785785..10785931,10787268..10787661,10818772..10818959,10936594..10936876))
location: region:10624754-10936876:-1
so has part: feature:10936594-10936876:-1:exon
so has part: feature:10818772-10818959:-1:exon
so has part: feature:10787268-10787661:-1:exon
so has part: feature:10785785-10785931:-1:exon
so has part: feature:10784268-10784375:-1:exon
so has part: feature:10779632-10779781:-1:exon
so has part: feature:10778542-10778709:-1:exon
so has part: feature:10770675-10770759:-1:exon
so has part: feature:10725094-10725168:-1:exon
so has part: feature:10718503-10718640:-1:exon
so has part: feature:10717768-10717918:-1:exon
so has part: feature:10708994-10709160:-1:exon
so has part: feature:10705317-10705511:-1:exon
so has part: feature:10703986-10704113:-1:exon
so has part: feature:10696514-10696618:-1:exon
so has part: feature:10694626-10694814:-1:exon
so has part: feature:10653458-10653726:-1:exon
so has part: feature:10646837-10646970:-1:exon
so has part: feature:10643363-10643514:-1:exon
so has part: feature:10642196-10642331:-1:exon
so has part: feature:10637128-10637228:-1:exon
so has part: feature:10629294-10629477:-1:exon
so has part: feature:10624754-10624991:-1:exon

XP_004596332.1
type: Protein
SIO_000068: ncbiprotein

position:10624754:-1
position: 10624754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10936876:-1
position: 10936876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10936594-10936876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10818772-10818959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10787268-10787661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10785785-10785931:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10784268-10784375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10779632-10779781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10778542-10778709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10770675-10770759:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10725094-10725168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10718503-10718640:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10717768-10717918:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10708994-10709160:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10705317-10705511:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10703986-10704113:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10696514-10696618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10694626-10694814:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10653458-10653726:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10646837-10646970:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10643363-10643514:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10642196-10642331:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10637128-10637228:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10629294-10629477:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10624754-10624991:-1:exon

ASTN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ASTN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: astrotactin-1 isoform X1
translation: MALTRLCALLACCWGPAAVLATAAGDVDASKELECKLKSITVSALPFLRENDLSIMHSPSASEPKLLFSVRNDFPGEMVVVDDLENTELPYFVLEISGNTEDIPLVRWRQQWLENGTLLFHIHHQDGAPSLPGQDPTEEPQHESAEEELRILHISVMGGMIALLLSILCLVMILYTRRRWCKRRRVPQPQKSASAEAANEIHYIPSVLIGGHGRESLRNARVQGHNSSGTLSIRETPILDGYEYDITDLRHHLQRECMNGGEDFASQVTRTLDSLQGCNEKAGMDLTPGSDNAKLCLMNKYKDNIIATSPVDSNHQQATLLSHTSSSQRKRISNKARAGSAFLNPEGDSGTEAENDPQLAFYTDPSRSRRRSRVGSPRSPVNKTTLTLISITSCVVGLVCSSHVSCPLVVKITLHVPEHLIADGSRFILLEGSQLDASDWLNPAQVVLFSQQNSSGPWAMDLCARRLLDPCEHQCDPETGRREQRTVGECLCYEGYMKDPVHKHLCIRNEWGTNQGPWPYTIFQRGFDLVLGEQPSDKIFRFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVMEDAVEVREELMTSSSFDSLEVLLDSFGPVRDCSKDNGGCSKNFRCISDRKLDSTGCVCPAGLSPMKDNSGCYDRHIGVDCSDGFNGGCEQLCLQQMAPFPDDPTLYNILMFCGCIEDYKLAVDGRSCQLITETCPEGGDCVESRELPMNQTLFGEMFFGYNNHSQEVAVGQVLKGTFRQNNFARGIDQQLPDGLVVATVPLENQCLEEISEPTPDPDFLTGMVNFSEVSGYPVLQHWKVRSVMYHIKLNQVAISQALNNALHSLDGATSRADFVALLDQFGNHYIQEAIYGFEESCSIWYPNKQVQRRLWLEYEDISKGNSPSDESEERERDPKMLTFPEYIASLSDSGTKRMAAGVRMECQSKGRCPSSCPLCHVTSSPDTPAEPVLLEVTRAAPIYELVTNNQTQRLLQEATMSSLWCSGTGDVIEDWCRCDSTAFGADGLPTCAPLPQPVLRLSTVHEPSSTLVVLEWEHSEPPIGVQIVDYLIRQEKVTDRMDHSKVETETVLSFVDDIISGAKSPCAMPSQVPDKQASTISLIIRCLEPDTIYMFTLWGVDNTGRRSRPSDVIVKTPCPVVDDIKAQEIADKIYNLFNGYTSGKEQQTAYNTLLDLGSPTLHRVLYHYNQHYESFGEFTWRCEDELGPRKAGLILSQLGDLSSWCNGLLQEPRISLRRSSLKYLGCRYSEIKPYGLDWSELSRDLRKTCEEQTLSIPYNDYGDSKDI
SIO_010081: ASTN1
subclass of: SO_0000673
so part of: ASTN1
location: complement(join(10624754..10624991,10629294..10629477,10637128..10637228,10642196..10642331,10643363..10643514,10646837..10646970,10653458..10653726,10694626..10694814,10696514..10696618,10703986..10704113,10705317..10705511,10708994..10709160,10717768..10717918,10718503..10718640,10725094..10725168,10770675..10770759,10778518..10778709,10779632..10779781,10784268..10784375,10785785..10785931,10787268..10787661,10818772..10818959,10936594..10936876))
location: region:10624754-10936876:-1
so has part: feature:10936594-10936876:-1:exon
so has part: feature:10818772-10818959:-1:exon
so has part: feature:10787268-10787661:-1:exon
so has part: feature:10785785-10785931:-1:exon
so has part: feature:10784268-10784375:-1:exon
so has part: feature:10779632-10779781:-1:exon
so has part: feature:10778518-10778709:-1:exon
so has part: feature:10770675-10770759:-1:exon
so has part: feature:10725094-10725168:-1:exon
so has part: feature:10718503-10718640:-1:exon
so has part: feature:10717768-10717918:-1:exon
so has part: feature:10708994-10709160:-1:exon
so has part: feature:10705317-10705511:-1:exon
so has part: feature:10703986-10704113:-1:exon
so has part: feature:10696514-10696618:-1:exon
so has part: feature:10694626-10694814:-1:exon
so has part: feature:10653458-10653726:-1:exon
so has part: feature:10646837-10646970:-1:exon
so has part: feature:10643363-10643514:-1:exon
so has part: feature:10642196-10642331:-1:exon
so has part: feature:10637128-10637228:-1:exon
so has part: feature:10629294-10629477:-1:exon
so has part: feature:10624754-10624991:-1:exon

XP_004596331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10936594-10936876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10818772-10818959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10787268-10787661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10785785-10785931:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10784268-10784375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10779632-10779781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10778518-10778709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10770675-10770759:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10725094-10725168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10718503-10718640:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10717768-10717918:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10708994-10709160:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10705317-10705511:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10703986-10704113:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10696514-10696618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10694626-10694814:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10653458-10653726:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10646837-10646970:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10643363-10643514:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10642196-10642331:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10637128-10637228:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10629294-10629477:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10624754-10624991:-1:exon

LOC105942400
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105942400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10631727..10633465
location: region:10631727-10633465:1
so has part: feature:10631727-10633465:1:exon
subclass of: SO_0000010

105942400
type: Gene
SIO_000068: ncbigene

position:10631727:1
position: 10631727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10633465:1
position: 10633465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10631727-10633465:1:exon

LOC105942400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC105942400
product: E3 ubiquitin-protein ligase TRAIP-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_036497627.1
SIO_010081: LOC105942400
subclass of: SO_0000673
so part of: LOC105942400
location: join(10631727..10631987,10632317..10633465)
location: region:10631727-10633465:1
so has part: feature:10631727-10631987:1:exon
so has part: feature:10632317-10633465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10631727-10631987:1:exon

position:10631987:1
position: 10631987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10632317-10633465:1:exon

position:10632317:1
position: 10632317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105942400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC105942400
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:10632857..10632859,aa:OTHER)
transl except: (pos:10633127..10633129,aa:OTHER)
product: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRAIP-like
translation: MPIHALCTISRDVAAIQCGHTFHLHCLIQWFETAPSRTCPQCRIQIGKRTITNNLFFDLVQEDESILNPEFLKNELDRARRLGLAAKSRYLRKRQNSQAIIDALRDSLEEYNATVESLQKALGKAEMLQSTFQKQMKYFEQQQDEPKQAQEEACRLRSKMKTTEQIELLLQSQQPKVEEMIRDMGVGQPAVEQLAVYCVSLKKEYEHLKKARKASGELADKPRKDLISSRSKLQTIYSELDQTKLDLWSAQKDLQTADKEIMSLKKEXTVLQETLNLLPVASETVNRLVLESPAPVEMVNLKLLRPSFGDDIDLNAMFDVDTPPARPSSSLHGHSKKLCMEQAHYPVQNVSKKVFKGXKQEHQLLLGGQCCAGELDEELAGTFPPFICNAVLGQRQPKRAKTEFCRSTDVVRTGFDGLEGRTKFIQPTDMAMIHPLPVKLKAKTKQKVGVRPLKPTSQAKLDTFLWQRD
SIO_010081: LOC105942400
subclass of: SO_0000673
so part of: LOC105942400
location: join(10631727..10631987,10632317..10633465)
location: region:10631727-10633465:1
so has part: feature:10631727-10631987:1:exon
so has part: feature:10632317-10633465:1:exon

XP_036353520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10631727-10631987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10632317-10633465:1:exon

LOC118760394
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760394
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 10833745..10833848
location: region:10833745-10833848:1
so has part: feature:10833745-10833848:1:exon
subclass of: SO_0000623

118760394
type: Gene
SIO_000068: ncbigene

position:10833745:1
position: 10833745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10833848:1
position: 10833848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10833745-10833848:1:exon

LOC118760394
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118760394
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996758.1
SIO_010081: LOC118760394
subclass of: SO_0000673
so part of: LOC118760394
location: 10833745..10833848
location: region:10833745-10833848:1
so has part: feature:10833745-10833848:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10833745-10833848:1:exon

BRINP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: BRINP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11004474..11069635
location: region:11004474-11069635:1
so has part: feature:11004474-11069635:1:exon
subclass of: SO_0000010

101524435
type: Gene
SIO_000068: ncbigene

position:11004474:1
position: 11004474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11069635:1
position: 11069635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11004474-11069635:1:exon

BRINP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: BRINP2
product: BMP/retinoic acid inducible neural specific 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004596273.3
SIO_010081: BRINP2
subclass of: SO_0000673
so part of: BRINP2
location: join(11004474..11004742,11047429..11047619,11048649..11048857,11060731..11060836,11063321..11063557,11065825..11066047,11067675..11069635)
location: region:11004474-11069635:1
so has part: feature:11004474-11004742:1:exon
so has part: feature:11047429-11047619:1:exon
so has part: feature:11048649-11048857:1:exon
so has part: feature:11060731-11060836:1:exon
so has part: feature:11063321-11063557:1:exon
so has part: feature:11065825-11066047:1:exon
so has part: feature:11067675-11069635:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11004474-11004742:1:exon

position:11004742:1
position: 11004742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11047429-11047619:1:exon

position:11047429:1
position: 11047429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11047619:1
position: 11047619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11048649-11048857:1:exon

position:11048649:1
position: 11048649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11048857:1
position: 11048857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11060731-11060836:1:exon

position:11060731:1
position: 11060731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11060836:1
position: 11060836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11063321-11063557:1:exon

position:11063321:1
position: 11063321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11063557:1
position: 11063557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11065825-11066047:1:exon

position:11065825:1
position: 11065825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11066047:1
position: 11066047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11067675-11069635:1:exon

position:11067675:1
position: 11067675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRINP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: BRINP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BMP/retinoic acid-inducible neural-specific protein 2
translation: MRWQCGTRFRGLRPAAAPWAALLALGLPAWLWALLAPVAAVGPEQHASPAGQPPLDWLLSDRGPFHRAQEYADFMERYRQGFTTRYRIYREFARWKVSNLALERKDFFSLPLPLAPEFIRNIRLLGRRPNLQQVTENLIKKYGTHFLLSATLGGEESLTIFVDKRKLSRKTETAGSFPAAGGSGNSSAVSLETLHQLAASYFIDRESTLRRLHHIQIATGAIKVTETRTGPLGCSNYDNLDSVSSVLVQSPENKVHLLGLQVLLPEYLRERFVAAALSYITCSSEGELVCKENDCWCKCSSTFPECNCPDADIQAMEDSLLQIQDSWATHNRQFEESEEFQALLKRLPDDRFLNSTAISQFWAMDSSLQHRYQQLGTSLKMLFKKTHRIVRRLFNLCKRCHRQPRFRLPKERSLSYWWNRIQSLLYCGESTLPGTFLEQSHSCTCPYDQSSCQGPIPCALGEGPACAHCAADNSTRCGSCNPGYVLAQGLCRPEVAESLENFLGLETDLQDLELKYLLQKRDSRIEVHSIFISNDMRLGSWFDPSWRKRMLLTLKSNKYKPGLVHVMLALSLQICLTKNSTLEPVMAIYVNPFGGSHSESWFMPVNEGNFPDWERTTVDAAAQCQNWTITLGNRWKTFFETVHVYLRSRIKSLDDNSNETIYYEPLEMSDPSKNLGYMKINTLQVFGYSLPFDPDAIRDLILQLDYPYTQGSQDSALLQLIELRDRVNQLSPPGKVRLDLFSCLLRHRLKLANNEVGRIQSSLRTFNSKLPNPVEYETGKLCS
SIO_010081: BRINP2
subclass of: SO_0000673
so part of: BRINP2
location: join(11004474..11004742,11047429..11047619,11048649..11048857,11060731..11060836,11063321..11063557,11065825..11066047,11067675..11068791)
location: region:11004474-11068791:1
so has part: feature:11004474-11004742:1:exon
so has part: feature:11047429-11047619:1:exon
so has part: feature:11048649-11048857:1:exon
so has part: feature:11060731-11060836:1:exon
so has part: feature:11063321-11063557:1:exon
so has part: feature:11065825-11066047:1:exon
so has part: feature:11067675-11068791:1:exon

XP_004596330.1
type: Protein
SIO_000068: ncbiprotein

position:11068791:1
position: 11068791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11004474-11004742:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11047429-11047619:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11048649-11048857:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11060731-11060836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11063321-11063557:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11065825-11066047:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11067675-11068791:1:exon

LOC101524200
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101524200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 11386029..11386337
location: region:11386029-11386337:1
so has part: feature:11386029-11386337:1:exon

101524200
type: Gene
SIO_000068: ncbigene

position:11386029:1
position: 11386029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11386337:1
position: 11386337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11386029-11386337:1:exon

LOC101524200
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101524200
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC101524200
subclass of: SO_0000673
so part of: LOC101524200
location: 11386029..11386337
location: region:11386029-11386337:1
so has part: feature:11386029-11386337:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11386029-11386337:1:exon

LOC101531134
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101531134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 11495024..11508747
location: region:11495024-11508747:1
so has part: feature:11495024-11508747:1:exon

101531134
type: Gene
SIO_000068: ncbigene

position:11495024:1
position: 11495024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11508747:1
position: 11508747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11495024-11508747:1:exon

LOC101531134
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101531134
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC101531134
subclass of: SO_0000673
so part of: LOC101531134
location: 11495024..11495085
location: region:11495024-11495085:1
so has part: feature:11495024-11495085:1:exon

position:11495085:1
position: 11495085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11495024-11495085:1:exon

LOC101531134
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101531134
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC101531134
subclass of: SO_0000673
so part of: LOC101531134
location: 11499831..11499959
location: region:11499831-11499959:1
so has part: feature:11499831-11499959:1:exon

position:11499831:1
position: 11499831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11499959:1
position: 11499959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11499831-11499959:1:exon

LOC101531134
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101531134
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC101531134
subclass of: SO_0000673
so part of: LOC101531134
location: 11508095..11508747
location: region:11508095-11508747:1
so has part: feature:11508095-11508747:1:exon

position:11508095:1
position: 11508095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11508095-11508747:1:exon

LOC105941512
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105941512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 11508792..11514419
location: region:11508792-11514419:1
so has part: feature:11508792-11514419:1:exon

105941512
type: Gene
SIO_000068: ncbigene

position:11508792:1
position: 11508792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11514419:1
position: 11514419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11508792-11514419:1:exon

LOC105941512
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC105941512
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC105941512
subclass of: SO_0000673
so part of: LOC105941512
location: 11508792..11508870
location: region:11508792-11508870:1
so has part: feature:11508792-11508870:1:exon

position:11508870:1
position: 11508870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11508792-11508870:1:exon

LOC105941512
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC105941512
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC105941512
subclass of: SO_0000673
so part of: LOC105941512
location: 11513759..11514419
location: region:11513759-11514419:1
so has part: feature:11513759-11514419:1:exon

position:11513759:1
position: 11513759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11513759-11514419:1:exon

LOC101530890
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101530890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11696642..11741265)
location: region:11696642-11741265:-1
so has part: feature:11696642-11741265:-1:exon
subclass of: SO_0000010

101530890
type: Gene
SIO_000068: ncbigene

position:11696642:-1
position: 11696642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11741265:-1
position: 11741265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11696642-11741265:-1:exon

LOC101530890
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101530890
product: protein transport protein Sec16B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_036497632.1
SIO_010081: LOC101530890
subclass of: SO_0000673
so part of: LOC101530890
location: complement(join(11696642..11696713,11697456..11697554,11698618..11698697,11698827..11698938,11699316..11699414,11699554..11699706,11703685..11703761,11704561..11704849,11706162..11706209,11707016..11707126,11708716..11708919,11716499..11716580,11718240..11718337,11732521..11732751,11733169..11733244,11734636..11734739,11735089..11735240,11735850..11735994,11737332..11737428,11737562..11737564,11738449..11738569,11739701..11739813,11740985..11741265))
location: region:11696642-11741265:-1
so has part: feature:11740985-11741265:-1:exon
so has part: feature:11739701-11739813:-1:exon
so has part: feature:11738449-11738569:-1:exon
so has part: feature:11737562-11737564:-1:exon
so has part: feature:11737332-11737428:-1:exon
so has part: feature:11735850-11735994:-1:exon
so has part: feature:11735089-11735240:-1:exon
so has part: feature:11734636-11734739:-1:exon
so has part: feature:11733169-11733244:-1:exon
so has part: feature:11732521-11732751:-1:exon
so has part: feature:11718240-11718337:-1:exon
so has part: feature:11716499-11716580:-1:exon
so has part: feature:11708716-11708919:-1:exon
so has part: feature:11707016-11707126:-1:exon
so has part: feature:11706162-11706209:-1:exon
so has part: feature:11704561-11704849:-1:exon
so has part: feature:11703685-11703761:-1:exon
so has part: feature:11699554-11699706:-1:exon
so has part: feature:11699316-11699414:-1:exon
so has part: feature:11698827-11698938:-1:exon
so has part: feature:11698618-11698697:-1:exon
so has part: feature:11697456-11697554:-1:exon
so has part: feature:11696642-11696713:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11740985-11741265:-1:exon

position:11740985:-1
position: 11740985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11739701-11739813:-1:exon

position:11739701:-1
position: 11739701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11739813:-1
position: 11739813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11738449-11738569:-1:exon

position:11738449:-1
position: 11738449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11738569:-1
position: 11738569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11737562-11737564:-1:exon

position:11737562:-1
position: 11737562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11737564:-1
position: 11737564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11737332-11737428:-1:exon

position:11737332:-1
position: 11737332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11737428:-1
position: 11737428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11735850-11735994:-1:exon

position:11735850:-1
position: 11735850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11735994:-1
position: 11735994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11735089-11735240:-1:exon

position:11735089:-1
position: 11735089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11735240:-1
position: 11735240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11734636-11734739:-1:exon

position:11734636:-1
position: 11734636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11734739:-1
position: 11734739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11733169-11733244:-1:exon

position:11733169:-1
position: 11733169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11733244:-1
position: 11733244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11732521-11732751:-1:exon

position:11732521:-1
position: 11732521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11732751:-1
position: 11732751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition