Ochotona princeps isolate UAM:Mamm:113957 chromosome 4A, OchPri4.0, whole genome shotgun sequence.
type: Entry
definition: Ochotona princeps isolate UAM:Mamm:113957 chromosome 4A, OchPri4.0, whole genome shotgun sequence.
sequence version: NC_050562.1
sequence date: 2020-10-09
sequence: sequence
division: CON
label: NC_050562.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA666703
dblink: SAMN15664588
keyword: WGS
keyword: RefSeq
source: Ochotona princeps (American pika)
organism: Ochotona princeps
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM025750.1.\nAssembly name: OchPri4.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of British\nColumbia Okanagan on 2020/09/21. The original whole-genome shotgun\nproject has the accession JACJUE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of British Columbia\n Okanagan\nAssembly Method :: Dovetail HiRise v. 2017\nAssembly Name :: OchPri4.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: GCA_000292845.1\nGenome Coverage :: 23.68x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Ochotona princeps Annotation Release\n 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 39143389
topology: linear
so has quality: SO_0000987
location: 1..39143389
location: region:1-39143389:1
RO_0002162: 9978

NC_050562
type: RefSeq
SIO_000068: refseq

PRJNA666703
type: BioProject
SIO_000068: bioproject

SAMN15664588
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39143389:1
position: 39143389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-39143389:1:source
so part of: sequence
organism: Ochotona princeps
mol type: genomic DNA
isolate: UAM:Mamm:113957
chromosome: 4A
sex: male
tissue type: liver
dev stage: adult
country: USA: Beaverhead-Deerlodge National Forest, Montana
lat lon: 45.34309 N 113.67609 W
collection date: 2010-06-19

9978
type: Taxonomy
SIO_000068: taxonomy

GINS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: GINS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 96898..130847
location: region:96898-130847:1
so has part: feature:96898-130847:1:exon
subclass of: SO_0000010

101532475
type: Gene
SIO_000068: ncbigene

position:96898:1
position: 96898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130847:1
position: 130847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96898-130847:1:exon

GINS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GINS1
product: GINS complex subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012929294.1
SIO_010081: GINS1
subclass of: SO_0000673
so part of: GINS1
location: join(96898..96976,106917..107015,107635..107725,110973..111089,125851..125925,130508..130847)
location: region:96898-130847:1
so has part: feature:96898-96976:1:exon
so has part: feature:106917-107015:1:exon
so has part: feature:107635-107725:1:exon
so has part: feature:110973-111089:1:exon
so has part: feature:125851-125925:1:exon
so has part: feature:130508-130847:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96898-96976:1:exon

position:96976:1
position: 96976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106917-107015:1:exon

position:106917:1
position: 106917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107015:1
position: 107015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107635-107725:1:exon

position:107635:1
position: 107635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107725:1
position: 107725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:110973-111089:1:exon

position:110973:1
position: 110973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111089:1
position: 111089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:125851-125925:1:exon

position:125851:1
position: 125851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125925:1
position: 125925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:130508-130847:1:exon

position:130508:1
position: 130508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GINS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GINS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication complex GINS protein PSF1
translation: MFQEDGIRQVLEEMKILYEQNQSDVTEAKSGGRSDLIPTIKFRHCCLLRNRRCTLAYLYDRLLRIRALRWEYGSVLPNTLRFHMSSEETEWFSHYKKSLATYMRTLGGDEGLDITQDMKPPKSLYIEVRCLKDYGEFEIDDGTSVLLKKNSQHFLPRGKCEQLIRQGVLEHVLS
SIO_010081: GINS1
subclass of: SO_0000673
so part of: GINS1
location: join(96903..96976,106917..107015,107635..107725,110973..111089,125851..125925,130508..130576)
location: region:96903-130576:1
so has part: feature:96903-96976:1:exon
so has part: feature:106917-107015:1:exon
so has part: feature:107635-107725:1:exon
so has part: feature:110973-111089:1:exon
so has part: feature:125851-125925:1:exon
so has part: feature:130508-130576:1:exon

XP_012784748.1
type: Protein
SIO_000068: ncbiprotein

position:96903:1
position: 96903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130576:1
position: 130576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96903-96976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106917-107015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107635-107725:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110973-111089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125851-125925:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:130508-130576:1:exon

NINL
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: NINL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(134127..187982)
location: region:134127-187982:-1
so has part: feature:134127-187982:-1:exon
subclass of: SO_0000010

101532717
type: Gene
SIO_000068: ncbigene

position:134127:-1
position: 134127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187982:-1
position: 187982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134127-187982:-1:exon

NINL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: NINL
product: ninein like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_012929275.1
SIO_010081: NINL
subclass of: SO_0000673
so part of: NINL
location: complement(join(134127..134318,135563..135676,140733..140802,141604..141708,145485..145632,145789..146612,147813..148120,148943..149049,150731..150863,156939..157019,157315..157425,158599..158773,162756..162896,164188..164324,167535..167705,171185..171337,171884..172074,181072..181168,182229..182247,187864..187982))
location: region:134127-187982:-1
so has part: feature:187864-187982:-1:exon
so has part: feature:182229-182247:-1:exon
so has part: feature:181072-181168:-1:exon
so has part: feature:171884-172074:-1:exon
so has part: feature:171185-171337:-1:exon
so has part: feature:167535-167705:-1:exon
so has part: feature:164188-164324:-1:exon
so has part: feature:162756-162896:-1:exon
so has part: feature:158599-158773:-1:exon
so has part: feature:157315-157425:-1:exon
so has part: feature:156939-157019:-1:exon
so has part: feature:150731-150863:-1:exon
so has part: feature:148943-149049:-1:exon
so has part: feature:147813-148120:-1:exon
so has part: feature:145789-146612:-1:exon
so has part: feature:145485-145632:-1:exon
so has part: feature:141604-141708:-1:exon
so has part: feature:140733-140802:-1:exon
so has part: feature:135563-135676:-1:exon
so has part: feature:134127-134318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187864-187982:-1:exon

position:187864:-1
position: 187864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182229-182247:-1:exon

position:182229:-1
position: 182229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182247:-1
position: 182247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:181072-181168:-1:exon

position:181072:-1
position: 181072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181168:-1
position: 181168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:171884-172074:-1:exon

position:171884:-1
position: 171884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172074:-1
position: 172074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:171185-171337:-1:exon

position:171185:-1
position: 171185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171337:-1
position: 171337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:167535-167705:-1:exon

position:167535:-1
position: 167535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167705:-1
position: 167705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:164188-164324:-1:exon

position:164188:-1
position: 164188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164324:-1
position: 164324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:162756-162896:-1:exon

position:162756:-1
position: 162756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162896:-1
position: 162896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:158599-158773:-1:exon

position:158599:-1
position: 158599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158773:-1
position: 158773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:157315-157425:-1:exon

position:157315:-1
position: 157315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157425:-1
position: 157425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:156939-157019:-1:exon

position:156939:-1
position: 156939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157019:-1
position: 157019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:150731-150863:-1:exon

position:150731:-1
position: 150731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150863:-1
position: 150863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:148943-149049:-1:exon

position:148943:-1
position: 148943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149049:-1
position: 149049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:147813-148120:-1:exon

position:147813:-1
position: 147813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148120:-1
position: 148120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:145789-146612:-1:exon

position:145789:-1
position: 145789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146612:-1
position: 146612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:145485-145632:-1:exon

position:145485:-1
position: 145485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145632:-1
position: 145632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:141604-141708:-1:exon

position:141604:-1
position: 141604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141708:-1
position: 141708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:140733-140802:-1:exon

position:140733:-1
position: 140733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140802:-1
position: 140802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:135563-135676:-1:exon

position:135563:-1
position: 135563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135676:-1
position: 135676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:134127-134318:-1:exon

position:134318:-1
position: 134318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NINL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: NINL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ninein-like protein
translation: MEEEESHYILQLRAVYSSCDTTGTGFLDRDELTQLCRKLHLEEKMPVNFEEFKAGFVAVLASGAGADPAEQESSSVESGQLEAWGSEVLGGSQKSCSPSLDSPESQVRAIWDKLGVGHSGHLSRQELAVVCQSIGLRTLDTEELEDLFNKLDRDGDGRVSLEEFQLGLFSHVPPSLTETCSVVEPSRPWCHCQVPEESSCHTPTASSLVSVASGLLLFSSIDDGTGSAFPEQIIATLAQEGIHNGREILQSLDFRVDEKVNLLELSWALDNELLTVDGDAQQAALACYRQELSFLQGRMEQLVQERDKARQDLDRAEKRNLEFVKEMDDCHSTLEQLTEKKIKHLEQGYLERLNLLRSEVEMERELLWEQARKQKATLEQDVARLLAEEARLRQKLNLALKENSRLQKEIVEVVVKLSDSEKVALKLQSDLELVLREKLEPQSTELLVQEERFAAVLKECELKCRDLQDRNDELQAELEGLRARLPESQHSSAQGPSGHRRRLPGRGPAGILFVGESTPMSIETEIMMEQVKEHYQDLSIQLETKVNYYEREVETMKRNFEKERKEVELAHQQEISALEEQRADLEALQAKAQEVIQGLQEQLRDVARTPEPTQAGLGQCCAQALSGLALRLEEELRLRHQDQLQQMRKEAELELSQKLSWLEAEHAAHCENLALQQRRERAQLLQAHELQVQALTTQLELQREQQEGREQEIRTRCHKQQLKLRETTSEEQAQICKAFALEKEKLELTYRQQVQQLTRQVEALQALLQGRLSAAGREQEGAPSPAAPCLGGVERPPAQPELGADGETEEPAEGPGHSCCADTVQSPAAAPILASRGPSESIDHSENQGGLLNAKEGAAVPSDGASCVQSCAMDKRGNLEDPVPHDRAPESLSGPAGLEPPCPGAEANDLAASSRMTEPQLSDGQEQLAMLGQTEAEGTAEREKSDVQAKLVQLEGIVCALEAAAASRDAERIEFQRLSEENVLLKKELGRVRQELEAAENASDAYRKEIGVLKRDKEEACAAVEELSKQEERERQLEAAAERVREVETRLRNVELLLEDKVQELTQQLERNRRSDLLLKELYVENAHLVKALQVTEEQQRRAERRSRGLEEKVRALNSLVNRMAPAALSV
SIO_010081: NINL
subclass of: SO_0000673
so part of: NINL
location: complement(join(134127..134318,135563..135676,140733..140802,141604..141708,145485..145632,145789..146612,147813..148120,148943..149049,150731..150863,156939..157019,157315..157425,158599..158773,162756..162896,164188..164324,167535..167705,171185..171337,171884..172074,181072..181168,182229..182247,187864..187982))
location: region:134127-187982:-1
so has part: feature:187864-187982:-1:exon
so has part: feature:182229-182247:-1:exon
so has part: feature:181072-181168:-1:exon
so has part: feature:171884-172074:-1:exon
so has part: feature:171185-171337:-1:exon
so has part: feature:167535-167705:-1:exon
so has part: feature:164188-164324:-1:exon
so has part: feature:162756-162896:-1:exon
so has part: feature:158599-158773:-1:exon
so has part: feature:157315-157425:-1:exon
so has part: feature:156939-157019:-1:exon
so has part: feature:150731-150863:-1:exon
so has part: feature:148943-149049:-1:exon
so has part: feature:147813-148120:-1:exon
so has part: feature:145789-146612:-1:exon
so has part: feature:145485-145632:-1:exon
so has part: feature:141604-141708:-1:exon
so has part: feature:140733-140802:-1:exon
so has part: feature:135563-135676:-1:exon
so has part: feature:134127-134318:-1:exon

XP_012784729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187864-187982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182229-182247:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181072-181168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171884-172074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171185-171337:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167535-167705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164188-164324:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:162756-162896:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158599-158773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:157315-157425:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:156939-157019:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:150731-150863:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:148943-149049:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147813-148120:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145789-146612:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:145485-145632:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:141604-141708:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:140733-140802:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:135563-135676:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:134127-134318:-1:exon

LOC101532964
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101532964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(237529..260207)
location: region:237529-260207:-1
so has part: feature:237529-260207:-1:exon
subclass of: SO_0000010

101532964
type: Gene
SIO_000068: ncbigene

position:237529:-1
position: 237529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260207:-1
position: 260207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237529-260207:-1:exon

LOC101532964
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101532964
product: N-acetylneuraminic acid phosphatase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_004593377.2
SIO_010081: LOC101532964
subclass of: SO_0000673
so part of: LOC101532964
location: complement(join(237529..237562,238300..238394,238545..238865,238982..239115,248902..249535,260118..260207))
location: region:237529-260207:-1
so has part: feature:260118-260207:-1:exon
so has part: feature:248902-249535:-1:exon
so has part: feature:238982-239115:-1:exon
so has part: feature:238545-238865:-1:exon
so has part: feature:238300-238394:-1:exon
so has part: feature:237529-237562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260118-260207:-1:exon

position:260118:-1
position: 260118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:248902-249535:-1:exon

position:248902:-1
position: 248902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249535:-1
position: 249535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:238982-239115:-1:exon

position:238982:-1
position: 238982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239115:-1
position: 239115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:238545-238865:-1:exon

position:238545:-1
position: 238545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238865:-1
position: 238865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:238300-238394:-1:exon

position:238300:-1
position: 238300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238394:-1
position: 238394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:237529-237562:-1:exon

position:237562:-1
position: 237562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101532964
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101532964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acylneuraminate-9-phosphatase
translation: MGLSRVRAVFFDLDNTLIDTAGASRLGMLEVIKLLQSKYHYEEEAEVICDKVQVKLSKECFHPYNTCITELRTSHWEEAIRETRGGAGDRKLAEECYFLWKSARLQHMTLAEDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACASYFDAIVIGGEYPEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWVNRSGGVPLKSAPVPHYVVSSVLELPALLPSIDHPYSAQLASATPNPPPSSQAVQLSLPEAYTSPSRPQSLRDMGGRQAVQIGIPGRTWRTWAGQSRPRSPPTPCRPRLSLGADAAGARGGAWRARRGARRVGRPDTKEARAPSEKRRSCPQVSRACGLRAAELFRRTPLRPRAASGAGAEWANRKCPRVVRSRSNGTLEPQACGLRLHASHLARVRLLAGEPDEVE
SIO_010081: LOC101532964
subclass of: SO_0000673
so part of: LOC101532964
location: complement(join(237529..237562,238300..238394,238545..238865,238982..239115,248902..249535,260118..260207))
location: region:237529-260207:-1
so has part: feature:260118-260207:-1:exon
so has part: feature:248902-249535:-1:exon
so has part: feature:238982-239115:-1:exon
so has part: feature:238545-238865:-1:exon
so has part: feature:238300-238394:-1:exon
so has part: feature:237529-237562:-1:exon

XP_004593434.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260118-260207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248902-249535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238982-239115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:238545-238865:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:238300-238394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:237529-237562:-1:exon

LOC118760216
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760216
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 488423..488529
location: region:488423-488529:1
so has part: feature:488423-488529:1:exon
subclass of: SO_0000623

118760216
type: Gene
SIO_000068: ncbigene

position:488423:1
position: 488423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488529:1
position: 488529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488423-488529:1:exon

LOC118760216
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118760216
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996652.1
SIO_010081: LOC118760216
subclass of: SO_0000673
so part of: LOC118760216
location: 488423..488529
location: region:488423-488529:1
so has part: feature:488423-488529:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:488423-488529:1:exon

LOC105942256
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105942256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 635923..636650
location: region:635923-636650:1
so has part: feature:635923-636650:1:exon
subclass of: SO_0000011

105942256
type: Gene
SIO_000068: ncbigene

position:635923:1
position: 635923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636650:1
position: 636650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635923-636650:1:exon

LOC105942256
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: lncRNA
gene: LOC105942256
product: uncharacterized LOC105942256
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001168388.1
SIO_010081: LOC105942256
subclass of: SO_0000673
so part of: LOC105942256
location: join(635923..636023,636099..636650)
location: region:635923-636650:1
so has part: feature:635923-636023:1:exon
so has part: feature:636099-636650:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:635923-636023:1:exon

position:636023:1
position: 636023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:636099-636650:1:exon

position:636099:1
position: 636099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADRA1D
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ADRA1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 695498..710955
location: region:695498-710955:1
so has part: feature:695498-710955:1:exon
subclass of: SO_0000010

101517429
type: Gene
SIO_000068: ncbigene

position:695498:1
position: 695498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710955:1
position: 710955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695498-710955:1:exon

ADRA1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ADRA1D
product: adrenoceptor alpha 1D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
transcript id: XM_004593320.1
SIO_010081: ADRA1D
subclass of: SO_0000673
so part of: ADRA1D
location: join(695498..696641,710357..710955)
location: region:695498-710955:1
so has part: feature:695498-696641:1:exon
so has part: feature:710357-710955:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:695498-696641:1:exon

position:696641:1
position: 696641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:710357-710955:1:exon

position:710357:1
position: 710357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADRA1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ADRA1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1D adrenergic receptor
translation: MTFRHLLSVTFEGPRPDISAGGSSAGSSGAGAGSTASSESPAVGSVPGAAGGGAGGGGVVGAGGGEENQSSAGEPGGAGGGGGGEVNGTAAAVGGLVVSAQSVGVGVFLAAFILTAVAGNLLVILSVACNRHLQTVTNYFIVNLAVADLLLSAAVLPFSATMEVLGFWAFGRAFCDVWAAVDVLCCTASILSLCTISVDRYVGVRHSLKYPAIMTERKAAAILALLWAVALVVSMGPLLGWKEPVPPDERFCGITEEAGYAVFSSLCSFYLPMAVIVVMYCRVYVVARSTTRSLEAGVKRERGKASEVVLRIHCRGAAAGASASTDGAPGGTRGTKGHTFRSSLSVRLLKFSREKKAAKTLAIVVGVFVLCWFPFFFVLPLGSLFPQLKPSEGVFKVIFWLGYFNSCVNPLIYPCSSREFKRAFLRLLRCQCRHRRRRPIWRVYGHHWRASSTGAGPHPDGAPSPGAALPGVPLALTSPGCPIAPEGPAATAAGRCKAPSAFREWRLPGPLRKPTTQLRAKVTSLSHRIRAGGAQRADAPSALRSEVEAVSLSVAQHVAEGTTCQAYELADCSDLQETDI
SIO_010081: ADRA1D
subclass of: SO_0000673
so part of: ADRA1D
location: join(695498..696641,710357..710955)
location: region:695498-710955:1
so has part: feature:695498-696641:1:exon
so has part: feature:710357-710955:1:exon

XP_004593377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:695498-696641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:710357-710955:1:exon

SMOX
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SMOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(724233..733324)
location: region:724233-733324:-1
so has part: feature:724233-733324:-1:exon
subclass of: SO_0000010

101517676
type: Gene
SIO_000068: ncbigene

position:724233:-1
position: 724233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733324:-1
position: 733324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724233-733324:-1:exon

SMOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SMOX
product: spermine oxidase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 Proteins
transcript id: XM_004593326.2
SIO_010081: SMOX
subclass of: SO_0000673
so part of: SMOX
location: complement(join(724233..724539,730974..731200,733087..733324))
location: region:724233-733324:-1
so has part: feature:733087-733324:-1:exon
so has part: feature:730974-731200:-1:exon
so has part: feature:724233-724539:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:733087-733324:-1:exon

position:733087:-1
position: 733087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:730974-731200:-1:exon

position:730974:-1
position: 730974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731200:-1
position: 731200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:724233-724539:-1:exon

position:724539:-1
position: 724539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SMOX
product: spermine oxidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 mRNAs, 6 Proteins
transcript id: XM_004593322.2
SIO_010081: SMOX
subclass of: SO_0000673
so part of: SMOX
location: complement(join(724233..724539,725837..725997,726423..727194,727347..727520,730974..731200,733087..733324))
location: region:724233-733324:-1
so has part: feature:733087-733324:-1:exon
so has part: feature:730974-731200:-1:exon
so has part: feature:727347-727520:-1:exon
so has part: feature:726423-727194:-1:exon
so has part: feature:725837-725997:-1:exon
so has part: feature:724233-724539:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:733087-733324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730974-731200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727347-727520:-1:exon

position:727347:-1
position: 727347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727520:-1
position: 727520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:726423-727194:-1:exon

position:726423:-1
position: 726423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727194:-1
position: 727194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:725837-725997:-1:exon

position:725837:-1
position: 725837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725997:-1
position: 725997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:724233-724539:-1:exon

SMOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SMOX
product: spermine oxidase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 Protein
transcript id: XM_004593325.2
SIO_010081: SMOX
subclass of: SO_0000673
so part of: SMOX
location: complement(join(724402..724539,727347..727520,730974..731200,733087..733324))
location: region:724402-733324:-1
so has part: feature:733087-733324:-1:exon
so has part: feature:730974-731200:-1:exon
so has part: feature:727347-727520:-1:exon
so has part: feature:724402-724539:-1:exon

position:724402:-1
position: 724402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:733087-733324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730974-731200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727347-727520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724402-724539:-1:exon

SMOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SMOX
product: spermine oxidase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1 Protein
transcript id: XM_004593324.2
SIO_010081: SMOX
subclass of: SO_0000673
so part of: SMOX
location: complement(join(724402..724539,725837..725997,726423..726672,727347..727520,730974..731200,733087..733324))
location: region:724402-733324:-1
so has part: feature:733087-733324:-1:exon
so has part: feature:730974-731200:-1:exon
so has part: feature:727347-727520:-1:exon
so has part: feature:726423-726672:-1:exon
so has part: feature:725837-725997:-1:exon
so has part: feature:724402-724539:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:733087-733324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730974-731200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727347-727520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726423-726672:-1:exon

position:726672:-1
position: 726672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:725837-725997:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724402-724539:-1:exon

SMOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SMOX
product: spermine oxidase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 Protein
transcript id: XM_004593323.2
SIO_010081: SMOX
subclass of: SO_0000673
so part of: SMOX
location: complement(join(724402..724539,725837..725997,726423..726541,726962..727194,727347..727520,730974..731200,733087..733324))
location: region:724402-733324:-1
so has part: feature:733087-733324:-1:exon
so has part: feature:730974-731200:-1:exon
so has part: feature:727347-727520:-1:exon
so has part: feature:726962-727194:-1:exon
so has part: feature:726423-726541:-1:exon
so has part: feature:725837-725997:-1:exon
so has part: feature:724402-724539:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:733087-733324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730974-731200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727347-727520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726962-727194:-1:exon

position:726962:-1
position: 726962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:726423-726541:-1:exon

position:726541:-1
position: 726541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:725837-725997:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724402-724539:-1:exon

SMOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SMOX
product: spermine oxidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 mRNAs, 1 Protein
transcript id: XM_004593321.2
SIO_010081: SMOX
subclass of: SO_0000673
so part of: SMOX
location: complement(join(724402..724629,725837..725997,726423..727194,727347..727520,730974..731200,733087..733324))
location: region:724402-733324:-1
so has part: feature:733087-733324:-1:exon
so has part: feature:730974-731200:-1:exon
so has part: feature:727347-727520:-1:exon
so has part: feature:726423-727194:-1:exon
so has part: feature:725837-725997:-1:exon
so has part: feature:724402-724629:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:733087-733324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730974-731200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727347-727520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726423-727194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:725837-725997:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724402-724629:-1:exon

position:724629:-1
position: 724629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SMOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermine oxidase isoform X6
translation: MQSCDSSGDSTDDPLSRGLRRRGQPRVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSRIGGRVQSVNLGHATFELGATWIHGSHGNPVYHLAEDNGLLEETTDGERSVGRISLYSKNGVACYLTNRGQRIPKDVVEEFSDLYNEPMQVLFSGEATHRKYYSTTHGALLSGQREAARLIEMYRDLFQQGP
SIO_010081: SMOX
subclass of: SO_0000673
so part of: SMOX
location: complement(join(724402..724539,730974..731200,733087..733294))
location: region:724402-733294:-1
so has part: feature:733087-733294:-1:exon
so has part: feature:730974-731200:-1:exon
so has part: feature:724402-724539:-1:exon

XP_004593383.1
type: Protein
SIO_000068: ncbiprotein

position:733294:-1
position: 733294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:733087-733294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730974-731200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724402-724539:-1:exon

SMOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SMOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermine oxidase isoform X5
translation: MQSCDSSGDSTDDPLSRGLRRRGQPRVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSRIGGRVQSVNLGHATFELGATWIHGSHGNPVYHLAEDNGLLEETTDGERSVGRISLYSKNGVACYLTNRGQRIPKDVVEEFSDLYNEVYNMTQEFFRHGKPVNAESQNSVGVFTREQVRSRIRDDPDDPAATKRLKLAMIQQYLKPMQVLFSGEATHRKYYSTTHGALLSGQREAARLIEMYRDLFQQGP
SIO_010081: SMOX
subclass of: SO_0000673
so part of: SMOX
location: complement(join(724402..724539,727347..727520,730974..731200,733087..733294))
location: region:724402-733294:-1
so has part: feature:733087-733294:-1:exon
so has part: feature:730974-731200:-1:exon
so has part: feature:727347-727520:-1:exon
so has part: feature:724402-724539:-1:exon

XP_004593382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:733087-733294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730974-731200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727347-727520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724402-724539:-1:exon

SMOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SMOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermine oxidase isoform X4
translation: MQSCDSSGDSTDDPLSRGLRRRGQPRVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSRIGGRVQSVNLGHATFELGATWIHGSHGNPVYHLAEDNGLLEETTDGERSVGRISLYSKNGVACYLTNRGQRIPKDVVEEFSDLYNEVYNMTQEFFRHGKPVNAESQNSVGVFTREQVRSRIRDDPDDPAATKRLKLAMIQQYLKEPFWGPECNSLQFVWEDEAENCTLTYPPELWYRKICGFDVLYPPERYGHVLSGWICGEEALVMERCDDEAVAEICTEMLRQFTGNPNIPKPRRILRSAWGSNPFFRGSYSYTQVGSSGVDVEKLAKPLPYTESSKAAPMQVLFSGEATHRKYYSTTHGALLSGQREAARLIEMYRDLFQQGP
SIO_010081: SMOX
subclass of: SO_0000673
so part of: SMOX
location: complement(join(724402..724539,725837..725997,726423..726672,727347..727520,730974..731200,733087..733294))
location: region:724402-733294:-1
so has part: feature:733087-733294:-1:exon
so has part: feature:730974-731200:-1:exon
so has part: feature:727347-727520:-1:exon
so has part: feature:726423-726672:-1:exon
so has part: feature:725837-725997:-1:exon
so has part: feature:724402-724539:-1:exon

XP_004593381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:733087-733294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730974-731200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727347-727520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726423-726672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:725837-725997:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724402-724539:-1:exon

SMOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SMOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermine oxidase isoform X3
translation: MQSCDSSGDSTDDPLSRGLRRRGQPRVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSRIGGRVQSVNLGHATFELGATWIHGSHGNPVYHLAEDNGLLEETTDGERSVGRISLYSKNGVACYLTNRGQRIPKDVVEEFSDLYNEVYNMTQEFFRHGKPVNAESQNSVGVFTREQVRSRIRDDPDDPAATKRLKLAMIQQYLKVESCESSSHSMDEVSLSAFGEWTEIPGAHHVIPSGFMRVVELLAEGIPAHVIQLGKPVRCIHWDQASARTRGPEIEPRERYGHVLSGWICGEEALVMERCDDEAVAEICTEMLRQFTGNPNIPKPRRILRSAWGSNPFFRGSYSYTQVGSSGVDVEKLAKPLPYTESSKAAPMQVLFSGEATHRKYYSTTHGALLSGQREAARLIEMYRDLFQQGP
SIO_010081: SMOX
subclass of: SO_0000673
so part of: SMOX
location: complement(join(724402..724539,725837..725997,726423..726541,726962..727194,727347..727520,730974..731200,733087..733294))
location: region:724402-733294:-1
so has part: feature:733087-733294:-1:exon
so has part: feature:730974-731200:-1:exon
so has part: feature:727347-727520:-1:exon
so has part: feature:726962-727194:-1:exon
so has part: feature:726423-726541:-1:exon
so has part: feature:725837-725997:-1:exon
so has part: feature:724402-724539:-1:exon

XP_004593380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:733087-733294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730974-731200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727347-727520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726962-727194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726423-726541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:725837-725997:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724402-724539:-1:exon

SMOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SMOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermine oxidase isoform X2
translation: MQSCDSSGDSTDDPLSRGLRRRGQPRVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSRIGGRVQSVNLGHATFELGATWIHGSHGNPVYHLAEDNGLLEETTDGERSVGRISLYSKNGVACYLTNRGQRIPKDVVEEFSDLYNEVYNMTQEFFRHGKPVNAESQNSVGVFTREQVRSRIRDDPDDPAATKRLKLAMIQQYLKVESCESSSHSMDEVSLSAFGEWTEIPGAHHVIPSGFMRVVELLAEGIPAHVIQLGKPVRCIHWDQASARTRGPEIEPRAEGDHNHDTGEGSQGGEGPQGRIRGGVQDEDKCWPVMVECEDCEVVPADHVIVTVSLGVLKRQYPSFFRPGLPSEKVAAIHRLGISTTDKIFLEFEEPFWGPECNSLQFVWEDEAENCTLTYPPELWYRKICGFDVLYPPERYGHVLSGWICGEEALVMERCDDEAVAEICTEMLRQFTGNPNIPKPRRILRSAWGSNPFFRGSYSYTQVGSSGVDVEKLAKPLPYTESSKAAPMQVLFSGEATHRKYYSTTHGALLSGQREAARLIEMYRDLFQQGP
SIO_010081: SMOX
subclass of: SO_0000673
so part of: SMOX
location: complement(join(724402..724539,725837..725997,726423..727194,727347..727520,730974..731200,733087..733294))
location: region:724402-733294:-1
so has part: feature:733087-733294:-1:exon
so has part: feature:730974-731200:-1:exon
so has part: feature:727347-727520:-1:exon
so has part: feature:726423-727194:-1:exon
so has part: feature:725837-725997:-1:exon
so has part: feature:724402-724539:-1:exon

XP_004593379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:733087-733294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730974-731200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727347-727520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726423-727194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:725837-725997:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724402-724539:-1:exon

SMOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SMOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermine oxidase isoform X1
translation: MQSCDSSGDSTDDPLSRGLRRRGQPRVVVIGAGLAGLAAAKALLEQGFTDVTVLEASSRIGGRVQSVNLGHATFELGATWIHGSHGNPVYHLAEDNGLLEETTDGERSVGRISLYSKNGVACYLTNRGQRIPKDVVEEFSDLYNEVYNMTQEFFRHGKPVNAESQNSVGVFTREQVRSRIRDDPDDPAATKRLKLAMIQQYLKVESCESSSHSMDEVSLSAFGEWTEIPGAHHVIPSGFMRVVELLAEGIPAHVIQLGKPVRCIHWDQASARTRGPEIEPRAEGDHNHDTGEGSQGGEGPQGRIRGGVQDEDKCWPVMVECEDCEVVPADHVIVTVSLGVLKRQYPSFFRPGLPSEKVAAIHRLGISTTDKIFLEFEEPFWGPECNSLQFVWEDEAENCTLTYPPELWYRKICGFDVLYPPERYGHVLSGWICGEEALVMERCDDEAVAEICTEMLRQFTGNPNIPKPRRILRSAWGSNPFFRGSYSYTQVGSSGVDVEKLAKPLPYTESSKAAQLGRTRAAEAQHVQSVSGRCFSRALRLPAQPMQVLFSGEATHRKYYSTTHGALLSGQREAARLIEMYRDLFQQGP
SIO_010081: SMOX
subclass of: SO_0000673
so part of: SMOX
location: complement(join(724402..724629,725837..725997,726423..727194,727347..727520,730974..731200,733087..733294))
location: region:724402-733294:-1
so has part: feature:733087-733294:-1:exon
so has part: feature:730974-731200:-1:exon
so has part: feature:727347-727520:-1:exon
so has part: feature:726423-727194:-1:exon
so has part: feature:725837-725997:-1:exon
so has part: feature:724402-724629:-1:exon

XP_004593378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:733087-733294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730974-731200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727347-727520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726423-727194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:725837-725997:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724402-724629:-1:exon

LOC101533440
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101533440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(924502..924985)
location: region:924502-924985:-1
so has part: feature:924502-924985:-1:exon

101533440
type: Gene
SIO_000068: ncbigene

position:924502:-1
position: 924502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924985:-1
position: 924985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:924502-924985:-1:exon

LOC101533440
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101533440
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC101533440
subclass of: SO_0000673
so part of: LOC101533440
location: complement(924502..924985)
location: region:924502-924985:-1
so has part: feature:924502-924985:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:924502-924985:-1:exon

RNF24
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RNF24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 938938..975727
location: region:938938-975727:1
so has part: feature:938938-975727:1:exon
subclass of: SO_0000010

101518726
type: Gene
SIO_000068: ncbigene

position:938938:1
position: 938938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975727:1
position: 975727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938938-975727:1:exon

RNF24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RNF24
product: ring finger protein 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins
transcript id: XM_004593327.1
SIO_010081: RNF24
subclass of: SO_0000673
so part of: RNF24
location: join(938938..939080,956061..956103,957990..958031,974948..975027,975589..975727)
location: region:938938-975727:1
so has part: feature:938938-939080:1:exon
so has part: feature:956061-956103:1:exon
so has part: feature:957990-958031:1:exon
so has part: feature:974948-975027:1:exon
so has part: feature:975589-975727:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:938938-939080:1:exon

position:939080:1
position: 939080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:956061-956103:1:exon

position:956061:1
position: 956061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956103:1
position: 956103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:957990-958031:1:exon

position:957990:1
position: 957990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958031:1
position: 958031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:974948-975027:1:exon

position:974948:1
position: 974948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975027:1
position: 975027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:975589-975727:1:exon

position:975589:1
position: 975589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RNF24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 24
translation: MSSDFPHYNFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQAHKEFYAYKQVILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQLHSKQDRGPPQGPLPGAENIV
SIO_010081: RNF24
subclass of: SO_0000673
so part of: RNF24
location: join(938938..939080,956061..956103,957990..958031,974948..975027,975589..975727)
location: region:938938-975727:1
so has part: feature:938938-939080:1:exon
so has part: feature:956061-956103:1:exon
so has part: feature:957990-958031:1:exon
so has part: feature:974948-975027:1:exon
so has part: feature:975589-975727:1:exon

XP_004593384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:938938-939080:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:956061-956103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957990-958031:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:974948-975027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:975589-975727:1:exon

PANK2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PANK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(981428..1003121)
location: region:981428-1003121:-1
so has part: feature:981428-1003121:-1:exon
subclass of: SO_0000010

101518964
type: Gene
SIO_000068: ncbigene

position:981428:-1
position: 981428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003121:-1
position: 1003121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:981428-1003121:-1:exon

PANK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PANK2
product: pantothenate kinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 7 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593328.2
SIO_010081: PANK2
subclass of: SO_0000673
so part of: PANK2
location: complement(join(981428..982393,986089..986214,987208..987331,991528..991704,992872..993125,996071..996423,1003088..1003121))
location: region:981428-1003121:-1
so has part: feature:1003088-1003121:-1:exon
so has part: feature:996071-996423:-1:exon
so has part: feature:992872-993125:-1:exon
so has part: feature:991528-991704:-1:exon
so has part: feature:987208-987331:-1:exon
so has part: feature:986089-986214:-1:exon
so has part: feature:981428-982393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1003088-1003121:-1:exon

position:1003088:-1
position: 1003088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:996071-996423:-1:exon

position:996071:-1
position: 996071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996423:-1
position: 996423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:992872-993125:-1:exon

position:992872:-1
position: 992872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993125:-1
position: 993125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:991528-991704:-1:exon

position:991528:-1
position: 991528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991704:-1
position: 991704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:987208-987331:-1:exon

position:987208:-1
position: 987208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987331:-1
position: 987331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:986089-986214:-1:exon

position:986089:-1
position: 986089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986214:-1
position: 986214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:981428-982393:-1:exon

position:982393:-1
position: 982393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PANK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PANK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pantothenate kinase 2, mitochondrial
translation: MPAFIQMGRDKNFSSLHTVFCATGGGAYKFEQDFLTIGDLQLCKLDELDCLIKGILYIDSVGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLLLVNIGSGVSILAVYSKDNYKRVTGTSLGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKVDKLVRDIYGGDYERFGLPGWAVASSFGNMMSKEKREAVTKEDLARATLITITNNIGSIARMCALNENINQVVFVGNFLRINTIAMRLLAYALDYWSKGQLKALFSEHEGYFGAVGALLELLKIP
SIO_010081: PANK2
subclass of: SO_0000673
so part of: PANK2
location: complement(join(982343..982393,986089..986214,987208..987331,991528..991704,992872..993125,996071..996178))
location: region:982343-996178:-1
so has part: feature:996071-996178:-1:exon
so has part: feature:992872-993125:-1:exon
so has part: feature:991528-991704:-1:exon
so has part: feature:987208-987331:-1:exon
so has part: feature:986089-986214:-1:exon
so has part: feature:982343-982393:-1:exon

XP_004593385.1
type: Protein
SIO_000068: ncbiprotein

position:982343:-1
position: 982343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996178:-1
position: 996178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996071-996178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:992872-993125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:991528-991704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:987208-987331:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986089-986214:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982343-982393:-1:exon

LOC118760213
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760213
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1019714..1019820)
location: region:1019714-1019820:-1
so has part: feature:1019714-1019820:-1:exon
subclass of: SO_0000623

118760213
type: Gene
SIO_000068: ncbigene

position:1019714:-1
position: 1019714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019820:-1
position: 1019820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019714-1019820:-1:exon

LOC118760213
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118760213
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996649.1
SIO_010081: LOC118760213
subclass of: SO_0000673
so part of: LOC118760213
location: complement(1019714..1019820)
location: region:1019714-1019820:-1
so has part: feature:1019714-1019820:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1019714-1019820:-1:exon

MAVS
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: MAVS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1026982..1034780)
location: region:1026982-1034780:-1
so has part: feature:1026982-1034780:-1:exon
subclass of: SO_0000010

101533668
type: Gene
SIO_000068: ncbigene

position:1026982:-1
position: 1026982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034780:-1
position: 1034780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026982-1034780:-1:exon

MAVS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MAVS
product: mitochondrial antiviral signaling protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_004593379.1
SIO_010081: MAVS
subclass of: SO_0000673
so part of: MAVS
location: complement(join(1026982..1027407,1030128..1030229,1030568..1030713,1033081..1033255,1034664..1034780))
location: region:1026982-1034780:-1
so has part: feature:1034664-1034780:-1:exon
so has part: feature:1033081-1033255:-1:exon
so has part: feature:1030568-1030713:-1:exon
so has part: feature:1030128-1030229:-1:exon
so has part: feature:1026982-1027407:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1034664-1034780:-1:exon

position:1034664:-1
position: 1034664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1033081-1033255:-1:exon

position:1033081:-1
position: 1033081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033255:-1
position: 1033255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1030568-1030713:-1:exon

position:1030568:-1
position: 1030568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030713:-1
position: 1030713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1030128-1030229:-1:exon

position:1030128:-1
position: 1030128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030229:-1
position: 1030229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1026982-1027407:-1:exon

position:1027407:-1
position: 1027407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAVS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MAVS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial antiviral-signaling protein
translation: MMFAEEKTYKFICHQHSRFCRVEVLEILPHLPCLTASDQDRLRATYNRLGNRDTLWDLFNTLQRRTGWVNYFVEALRVCELADLADLVAHEYQSYLPRNLNHPRATREVPAPATPATPAVDHDGSRQQLSYPLPVQDTQQPKSLGQSPEQAPQIPSSEPVLRTLPVPLEPSCDLAAISPQETPMAPAPRDAPGDGLLSGPELSKPNELLSRFASLPYSGCSADLDISRSSSLAPGASHLPEENEYVSVGTFGVHVVEEPSANLLAGNPGPSVSPRLREEEEDEEEIQCNWVAPWAPWFGAAIAGALVATLLAMLYRRRALQ
SIO_010081: MAVS
subclass of: SO_0000673
so part of: MAVS
location: complement(join(1026982..1027407,1030128..1030229,1030568..1030713,1033081..1033255,1034664..1034780))
location: region:1026982-1034780:-1
so has part: feature:1034664-1034780:-1:exon
so has part: feature:1033081-1033255:-1:exon
so has part: feature:1030568-1030713:-1:exon
so has part: feature:1030128-1030229:-1:exon
so has part: feature:1026982-1027407:-1:exon

XP_004593436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1034664-1034780:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1033081-1033255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030568-1030713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030128-1030229:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1026982-1027407:-1:exon

AP5S1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: AP5S1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1062767..1064106)
location: region:1062767-1064106:-1
so has part: feature:1062767-1064106:-1:exon
subclass of: SO_0000010

101519211
type: Gene
SIO_000068: ncbigene

position:1062767:-1
position: 1062767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064106:-1
position: 1064106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062767-1064106:-1:exon

AP5S1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: AP5S1
product: adaptor related protein complex 5 subunit sigma 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_004593329.1
SIO_010081: AP5S1
subclass of: SO_0000673
so part of: AP5S1
location: complement(join(1062767..1063193,1063940..1064106))
location: region:1062767-1064106:-1
so has part: feature:1063940-1064106:-1:exon
so has part: feature:1062767-1063193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063940-1064106:-1:exon

position:1063940:-1
position: 1063940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1062767-1063193:-1:exon

position:1063193:-1
position: 1063193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP5S1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: AP5S1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-5 complex subunit sigma-1
translation: MVHAFLIHTVRAEDAGLCRVLYSRVFGAEDSAEDWPPRAAGTDRLLCKEQMLAVARQVDTMCQLQQQASGRSSMELQAQVSDEPVFLPEAPFGAFHLAAGDPFREPRTVLWLGVLSLGFTLVLDAHDNLLLAESTLRLLVRLLLDHLRLLTPGTNLLLRADRIEGLLSRFLPHGQLLFLNDQFVQVLEKEFSASWPR
SIO_010081: AP5S1
subclass of: SO_0000673
so part of: AP5S1
location: complement(join(1062767..1063193,1063940..1064106))
location: region:1062767-1064106:-1
so has part: feature:1063940-1064106:-1:exon
so has part: feature:1062767-1063193:-1:exon

XP_004593386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1063940-1064106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1062767-1063193:-1:exon

CDC25B
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CDC25B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1071792..1078947)
location: region:1071792-1078947:-1
so has part: feature:1071792-1078947:-1:exon
subclass of: SO_0000010

101533918
type: Gene
SIO_000068: ncbigene

position:1071792:-1
position: 1071792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078947:-1
position: 1078947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1071792-1078947:-1:exon

CDC25B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CDC25B
product: cell division cycle 25B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 5 Proteins
transcript id: XM_012929288.1
SIO_010081: CDC25B
subclass of: SO_0000673
so part of: CDC25B
location: complement(join(1071792..1071932,1072073..1072184,1072911..1073044,1073235..1073333,1073470..1073532,1073929..1074024,1074115..1074294,1074390..1074470,1074792..1074926,1075022..1075144,1075263..1075388,1075587..1075623,1075716..1075757,1077353..1077404,1077995..1078074,1078811..1078947))
location: region:1071792-1078947:-1
so has part: feature:1078811-1078947:-1:exon
so has part: feature:1077995-1078074:-1:exon
so has part: feature:1077353-1077404:-1:exon
so has part: feature:1075716-1075757:-1:exon
so has part: feature:1075587-1075623:-1:exon
so has part: feature:1075263-1075388:-1:exon
so has part: feature:1075022-1075144:-1:exon
so has part: feature:1074792-1074926:-1:exon
so has part: feature:1074390-1074470:-1:exon
so has part: feature:1074115-1074294:-1:exon
so has part: feature:1073929-1074024:-1:exon
so has part: feature:1073470-1073532:-1:exon
so has part: feature:1073235-1073333:-1:exon
so has part: feature:1072911-1073044:-1:exon
so has part: feature:1072073-1072184:-1:exon
so has part: feature:1071792-1071932:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1078811-1078947:-1:exon

position:1078811:-1
position: 1078811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1077995-1078074:-1:exon

position:1077995:-1
position: 1077995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078074:-1
position: 1078074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1077353-1077404:-1:exon

position:1077353:-1
position: 1077353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077404:-1
position: 1077404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1075716-1075757:-1:exon

position:1075716:-1
position: 1075716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075757:-1
position: 1075757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1075587-1075623:-1:exon

position:1075587:-1
position: 1075587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075623:-1
position: 1075623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1075263-1075388:-1:exon

position:1075263:-1
position: 1075263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075388:-1
position: 1075388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1075022-1075144:-1:exon

position:1075022:-1
position: 1075022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075144:-1
position: 1075144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1074792-1074926:-1:exon

position:1074792:-1
position: 1074792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074926:-1
position: 1074926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1074390-1074470:-1:exon

position:1074390:-1
position: 1074390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074470:-1
position: 1074470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1074115-1074294:-1:exon

position:1074115:-1
position: 1074115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074294:-1
position: 1074294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1073929-1074024:-1:exon

position:1073929:-1
position: 1073929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074024:-1
position: 1074024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1073470-1073532:-1:exon

position:1073470:-1
position: 1073470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073532:-1
position: 1073532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1073235-1073333:-1:exon

position:1073235:-1
position: 1073235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073333:-1
position: 1073333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1072911-1073044:-1:exon

position:1072911:-1
position: 1072911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073044:-1
position: 1073044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1072073-1072184:-1:exon

position:1072073:-1
position: 1072073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072184:-1
position: 1072184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1071792-1071932:-1:exon

position:1071932:-1
position: 1071932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDC25B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CDC25B
product: cell division cycle 25B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 Proteins
transcript id: XM_012929289.1
SIO_010081: CDC25B
subclass of: SO_0000673
so part of: CDC25B
location: complement(join(1071792..1071932,1072073..1072184,1072911..1073044,1073235..1073333,1073470..1073532,1073929..1074024,1074115..1074294,1074390..1074470,1074792..1074926,1075022..1075144,1075587..1075623,1075716..1075757,1077353..1077404,1077995..1078116,1078811..1078947))
location: region:1071792-1078947:-1
so has part: feature:1078811-1078947:-1:exon
so has part: feature:1077995-1078116:-1:exon
so has part: feature:1077353-1077404:-1:exon
so has part: feature:1075716-1075757:-1:exon
so has part: feature:1075587-1075623:-1:exon
so has part: feature:1075022-1075144:-1:exon
so has part: feature:1074792-1074926:-1:exon
so has part: feature:1074390-1074470:-1:exon
so has part: feature:1074115-1074294:-1:exon
so has part: feature:1073929-1074024:-1:exon
so has part: feature:1073470-1073532:-1:exon
so has part: feature:1073235-1073333:-1:exon
so has part: feature:1072911-1073044:-1:exon
so has part: feature:1072073-1072184:-1:exon
so has part: feature:1071792-1071932:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1078811-1078947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077995-1078116:-1:exon

position:1078116:-1
position: 1078116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1077353-1077404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075716-1075757:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1075587-1075623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075022-1075144:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074792-1074926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074390-1074470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074115-1074294:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1073929-1074024:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1073470-1073532:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073235-1073333:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072911-1073044:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1072073-1072184:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1071792-1071932:-1:exon

CDC25B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CDC25B
product: cell division cycle 25B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 8 Proteins
transcript id: XM_004593380.2
SIO_010081: CDC25B
subclass of: SO_0000673
so part of: CDC25B
location: complement(join(1071792..1071932,1072073..1072184,1072911..1073044,1073235..1073333,1073470..1073532,1073929..1074024,1074115..1074294,1074390..1074470,1074792..1074926,1075022..1075144,1075263..1075388,1075587..1075623,1075716..1075757,1077353..1077404,1077995..1078116,1078811..1078947))
location: region:1071792-1078947:-1
so has part: feature:1078811-1078947:-1:exon
so has part: feature:1077995-1078116:-1:exon
so has part: feature:1077353-1077404:-1:exon
so has part: feature:1075716-1075757:-1:exon
so has part: feature:1075587-1075623:-1:exon
so has part: feature:1075263-1075388:-1:exon
so has part: feature:1075022-1075144:-1:exon
so has part: feature:1074792-1074926:-1:exon
so has part: feature:1074390-1074470:-1:exon
so has part: feature:1074115-1074294:-1:exon
so has part: feature:1073929-1074024:-1:exon
so has part: feature:1073470-1073532:-1:exon
so has part: feature:1073235-1073333:-1:exon
so has part: feature:1072911-1073044:-1:exon
so has part: feature:1072073-1072184:-1:exon
so has part: feature:1071792-1071932:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1078811-1078947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077995-1078116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077353-1077404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075716-1075757:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1075587-1075623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075263-1075388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1075022-1075144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074792-1074926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074390-1074470:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1074115-1074294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1073929-1074024:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073470-1073532:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1073235-1073333:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1072911-1073044:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1072073-1072184:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1071792-1071932:-1:exon

CDC25B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CDC25B
product: cell division cycle 25B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_012929290.1
SIO_010081: CDC25B
subclass of: SO_0000673
so part of: CDC25B
location: complement(join(1071792..1071932,1072073..1072184,1072911..1073044,1073235..1073333,1073470..1073532,1073929..1074024,1074115..1074294,1074390..1074470,1074792..1074926,1075218..1075388,1075587..1075623,1075716..1075757,1077353..1077404,1077995..1078116,1078811..1078887))
location: region:1071792-1078887:-1
so has part: feature:1078811-1078887:-1:exon
so has part: feature:1077995-1078116:-1:exon
so has part: feature:1077353-1077404:-1:exon
so has part: feature:1075716-1075757:-1:exon
so has part: feature:1075587-1075623:-1:exon
so has part: feature:1075218-1075388:-1:exon
so has part: feature:1074792-1074926:-1:exon
so has part: feature:1074390-1074470:-1:exon
so has part: feature:1074115-1074294:-1:exon
so has part: feature:1073929-1074024:-1:exon
so has part: feature:1073470-1073532:-1:exon
so has part: feature:1073235-1073333:-1:exon
so has part: feature:1072911-1073044:-1:exon
so has part: feature:1072073-1072184:-1:exon
so has part: feature:1071792-1071932:-1:exon

position:1078887:-1
position: 1078887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078811-1078887:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077995-1078116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077353-1077404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075716-1075757:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1075587-1075623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075218-1075388:-1:exon

position:1075218:-1
position: 1075218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1074792-1074926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074390-1074470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074115-1074294:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1073929-1074024:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1073470-1073532:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073235-1073333:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072911-1073044:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1072073-1072184:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1071792-1071932:-1:exon

CDC25B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CDC25B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: M-phase inducer phosphatase 2 isoform X2
translation: MHNLAGLGSSHLARLPMSRRASECSSSDSSESSDAGLCMDSPSPVDPQMAEQTFEQVIQAASRVIRSEQFAIRRFQSLPVRLLGHSPVLRNVTNSQTLHGWRKREAGGCCAASSLEEDKENEEVVFKMPWKPTHPSPTRALTEWASRREAFTQRPSSAPNLMHLSPEQKMEMEELCPLAQASLSLTPVQGTAEEDDGFVDILESDLKDDSAVPPGMESLISAPLVKIVDKQEEQDLVMFSKCQRLFRSPSMPCSVIRPILKRMERPQDRDVPVQSKRRRSGTPPKEEPWEPQQPKARVLRSKSLCNDEIESILDSDHRGLIGDYSKAFLLQTVDGKHQDLKYISPETMVALLMGKFSNIVEKFVIVDCRYPYEYEGGHIKSAVNLPLERDAETFLLQSPMVPCSLDKRIILIFHCEFSSERGPRMCRFIRERDRAANDYPNLFYPEMYILKGGYKEFFPQHPNFCEPQDYRPMHHEAFKDELRAFRLKTRSWAGERSRRELCSRLQEQ
SIO_010081: CDC25B
subclass of: SO_0000673
so part of: CDC25B
location: complement(join(1071792..1071932,1072073..1072184,1072911..1073044,1073235..1073333,1073470..1073532,1073929..1074024,1074115..1074294,1074390..1074470,1074792..1074926,1075022..1075144,1075263..1075388,1075587..1075623,1075716..1075757,1077353..1077404,1077995..1078074,1078811..1078836))
location: region:1071792-1078836:-1
so has part: feature:1078811-1078836:-1:exon
so has part: feature:1077995-1078074:-1:exon
so has part: feature:1077353-1077404:-1:exon
so has part: feature:1075716-1075757:-1:exon
so has part: feature:1075587-1075623:-1:exon
so has part: feature:1075263-1075388:-1:exon
so has part: feature:1075022-1075144:-1:exon
so has part: feature:1074792-1074926:-1:exon
so has part: feature:1074390-1074470:-1:exon
so has part: feature:1074115-1074294:-1:exon
so has part: feature:1073929-1074024:-1:exon
so has part: feature:1073470-1073532:-1:exon
so has part: feature:1073235-1073333:-1:exon
so has part: feature:1072911-1073044:-1:exon
so has part: feature:1072073-1072184:-1:exon
so has part: feature:1071792-1071932:-1:exon

XP_012784742.1
type: Protein
SIO_000068: ncbiprotein

position:1078836:-1
position: 1078836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078811-1078836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077995-1078074:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077353-1077404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075716-1075757:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1075587-1075623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075263-1075388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1075022-1075144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074792-1074926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074390-1074470:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1074115-1074294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1073929-1074024:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073470-1073532:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1073235-1073333:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1072911-1073044:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1072073-1072184:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1071792-1071932:-1:exon

CDC25B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CDC25B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: M-phase inducer phosphatase 2 isoform X3
translation: MHNLAGLGSETPRSPAGSLLFHSSHLARLPMSRRASECSSSDSSESSDAGLCMDSPSPVDPQMAEQTFEQVIQAASRVIRSEQFAIRRFQSLPEEVVFKMPWKPTHPSPTRALTEWASRREAFTQRPSSAPNLMHLSPEQKMEMEELCPLAQASLSLTPVQGTAEEDDGFVDILESDLKDDSAVPPGMESLISAPLVKIVDKQEEQDLVMFSKCQRLFRSPSMPCSVIRPILKRMERPQDRDVPVQSKRRRSGTPPKEEPWEPQQPKARVLRSKSLCNDEIESILDSDHRGLIGDYSKAFLLQTVDGKHQDLKYISPETMVALLMGKFSNIVEKFVIVDCRYPYEYEGGHIKSAVNLPLERDAETFLLQSPMVPCSLDKRIILIFHCEFSSERGPRMCRFIRERDRAANDYPNLFYPEMYILKGGYKEFFPQHPNFCEPQDYRPMHHEAFKDELRAFRLKTRSWAGERSRRELCSRLQEQ
SIO_010081: CDC25B
subclass of: SO_0000673
so part of: CDC25B
location: complement(join(1071792..1071932,1072073..1072184,1072911..1073044,1073235..1073333,1073470..1073532,1073929..1074024,1074115..1074294,1074390..1074470,1074792..1074926,1075022..1075144,1075587..1075623,1075716..1075757,1077353..1077404,1077995..1078116,1078811..1078836))
location: region:1071792-1078836:-1
so has part: feature:1078811-1078836:-1:exon
so has part: feature:1077995-1078116:-1:exon
so has part: feature:1077353-1077404:-1:exon
so has part: feature:1075716-1075757:-1:exon
so has part: feature:1075587-1075623:-1:exon
so has part: feature:1075022-1075144:-1:exon
so has part: feature:1074792-1074926:-1:exon
so has part: feature:1074390-1074470:-1:exon
so has part: feature:1074115-1074294:-1:exon
so has part: feature:1073929-1074024:-1:exon
so has part: feature:1073470-1073532:-1:exon
so has part: feature:1073235-1073333:-1:exon
so has part: feature:1072911-1073044:-1:exon
so has part: feature:1072073-1072184:-1:exon
so has part: feature:1071792-1071932:-1:exon

XP_012784743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1078811-1078836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077995-1078116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077353-1077404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075716-1075757:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1075587-1075623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075022-1075144:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074792-1074926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074390-1074470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074115-1074294:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1073929-1074024:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1073470-1073532:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073235-1073333:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072911-1073044:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1072073-1072184:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1071792-1071932:-1:exon

CDC25B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CDC25B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: M-phase inducer phosphatase 2 isoform X1
translation: MHNLAGLGSETPRSPAGSLLFHSSHLARLPMSRRASECSSSDSSESSDAGLCMDSPSPVDPQMAEQTFEQVIQAASRVIRSEQFAIRRFQSLPVRLLGHSPVLRNVTNSQTLHGWRKREAGGCCAASSLEEDKENEEVVFKMPWKPTHPSPTRALTEWASRREAFTQRPSSAPNLMHLSPEQKMEMEELCPLAQASLSLTPVQGTAEEDDGFVDILESDLKDDSAVPPGMESLISAPLVKIVDKQEEQDLVMFSKCQRLFRSPSMPCSVIRPILKRMERPQDRDVPVQSKRRRSGTPPKEEPWEPQQPKARVLRSKSLCNDEIESILDSDHRGLIGDYSKAFLLQTVDGKHQDLKYISPETMVALLMGKFSNIVEKFVIVDCRYPYEYEGGHIKSAVNLPLERDAETFLLQSPMVPCSLDKRIILIFHCEFSSERGPRMCRFIRERDRAANDYPNLFYPEMYILKGGYKEFFPQHPNFCEPQDYRPMHHEAFKDELRAFRLKTRSWAGERSRRELCSRLQEQ
SIO_010081: CDC25B
subclass of: SO_0000673
so part of: CDC25B
location: complement(join(1071792..1071932,1072073..1072184,1072911..1073044,1073235..1073333,1073470..1073532,1073929..1074024,1074115..1074294,1074390..1074470,1074792..1074926,1075022..1075144,1075263..1075388,1075587..1075623,1075716..1075757,1077353..1077404,1077995..1078116,1078811..1078836))
location: region:1071792-1078836:-1
so has part: feature:1078811-1078836:-1:exon
so has part: feature:1077995-1078116:-1:exon
so has part: feature:1077353-1077404:-1:exon
so has part: feature:1075716-1075757:-1:exon
so has part: feature:1075587-1075623:-1:exon
so has part: feature:1075263-1075388:-1:exon
so has part: feature:1075022-1075144:-1:exon
so has part: feature:1074792-1074926:-1:exon
so has part: feature:1074390-1074470:-1:exon
so has part: feature:1074115-1074294:-1:exon
so has part: feature:1073929-1074024:-1:exon
so has part: feature:1073470-1073532:-1:exon
so has part: feature:1073235-1073333:-1:exon
so has part: feature:1072911-1073044:-1:exon
so has part: feature:1072073-1072184:-1:exon
so has part: feature:1071792-1071932:-1:exon

XP_004593437.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1078811-1078836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077995-1078116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077353-1077404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075716-1075757:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1075587-1075623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075263-1075388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1075022-1075144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074792-1074926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074390-1074470:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1074115-1074294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1073929-1074024:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073470-1073532:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1073235-1073333:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1072911-1073044:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1072073-1072184:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1071792-1071932:-1:exon

CDC25B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CDC25B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: M-phase inducer phosphatase 2 isoform X4
translation: MHNLAGLGSETPRSPAGSLLFHSSHLARLPMSRRASECSSSDSSESSDAGLCMDSPSPVDPQMAEQTFEQVIQAASRVIRSEQFAIRRFQSLPVRLLGHSPVLRNVTNSQTLHGWRKREAGGCCAASSLEEDKENVSSKGPTRRAPGRLLHLSPEQKMEMEELCPLAQASLSLTPVQGTAEEDDGFVDILESDLKDDSAVPPGMESLISAPLVKIVDKQEEQDLVMFSKCQRLFRSPSMPCSVIRPILKRMERPQDRDVPVQSKRRRSGTPPKEEPWEPQQPKARVLRSKSLCNDEIESILDSDHRGLIGDYSKAFLLQTVDGKHQDLKYISPETMVALLMGKFSNIVEKFVIVDCRYPYEYEGGHIKSAVNLPLERDAETFLLQSPMVPCSLDKRIILIFHCEFSSERGPRMCRFIRERDRAANDYPNLFYPEMYILKGGYKEFFPQHPNFCEPQDYRPMHHEAFKDELRAFRLKTRSWAGERSRRELCSRLQEQ
SIO_010081: CDC25B
subclass of: SO_0000673
so part of: CDC25B
location: complement(join(1071792..1071932,1072073..1072184,1072911..1073044,1073235..1073333,1073470..1073532,1073929..1074024,1074115..1074294,1074390..1074470,1074792..1074926,1075218..1075388,1075587..1075623,1075716..1075757,1077353..1077404,1077995..1078116,1078811..1078836))
location: region:1071792-1078836:-1
so has part: feature:1078811-1078836:-1:exon
so has part: feature:1077995-1078116:-1:exon
so has part: feature:1077353-1077404:-1:exon
so has part: feature:1075716-1075757:-1:exon
so has part: feature:1075587-1075623:-1:exon
so has part: feature:1075218-1075388:-1:exon
so has part: feature:1074792-1074926:-1:exon
so has part: feature:1074390-1074470:-1:exon
so has part: feature:1074115-1074294:-1:exon
so has part: feature:1073929-1074024:-1:exon
so has part: feature:1073470-1073532:-1:exon
so has part: feature:1073235-1073333:-1:exon
so has part: feature:1072911-1073044:-1:exon
so has part: feature:1072073-1072184:-1:exon
so has part: feature:1071792-1071932:-1:exon

XP_012784744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1078811-1078836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077995-1078116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077353-1077404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075716-1075757:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1075587-1075623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075218-1075388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074792-1074926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074390-1074470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074115-1074294:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1073929-1074024:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1073470-1073532:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073235-1073333:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072911-1073044:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1072073-1072184:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1071792-1071932:-1:exon

CDC25B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CDC25B
product: cell division cycle 25B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_012929287.2
SIO_010081: CDC25B
subclass of: SO_0000673
so part of: CDC25B
location: complement(join(1071792..1071932,1072073..1072184,1072911..1073044,1073235..1073333,1073470..1073532,1073929..1074024,1074115..1074294,1074792..1074926,1075022..1075144,1075263..1075388,1075587..1075623,1075716..1075757,1077353..1077404,1077995..1078118))
location: region:1071792-1078118:-1
so has part: feature:1077995-1078118:-1:exon
so has part: feature:1077353-1077404:-1:exon
so has part: feature:1075716-1075757:-1:exon
so has part: feature:1075587-1075623:-1:exon
so has part: feature:1075263-1075388:-1:exon
so has part: feature:1075022-1075144:-1:exon
so has part: feature:1074792-1074926:-1:exon
so has part: feature:1074115-1074294:-1:exon
so has part: feature:1073929-1074024:-1:exon
so has part: feature:1073470-1073532:-1:exon
so has part: feature:1073235-1073333:-1:exon
so has part: feature:1072911-1073044:-1:exon
so has part: feature:1072073-1072184:-1:exon
so has part: feature:1071792-1071932:-1:exon

position:1078118:-1
position: 1078118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077995-1078118:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077353-1077404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075716-1075757:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075587-1075623:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1075263-1075388:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075022-1075144:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074792-1074926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074115-1074294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1073929-1074024:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1073470-1073532:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1073235-1073333:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072911-1073044:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072073-1072184:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1071792-1071932:-1:exon

CDC25B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CDC25B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: M-phase inducer phosphatase 2 isoform X5
translation: MSRRASECSSSDSSESSDAGLCMDSPSPVDPQMAEQTFEQVIQAASRVIRSEQFAIRRFQSLPVRLLGHSPVLRNVTNSQTLHGWRKREAGGCCAASSLEEDKENEEVVFKMPWKPTHPSPTRALTEWASRREAFTQRPSSAPNLMHLSPEQKMEMEELCPLAQASLSLTPVQGTAEEDDGFVDILESDLKDLVMFSKCQRLFRSPSMPCSVIRPILKRMERPQDRDVPVQSKRRRSGTPPKEEPWEPQQPKARVLRSKSLCNDEIESILDSDHRGLIGDYSKAFLLQTVDGKHQDLKYISPETMVALLMGKFSNIVEKFVIVDCRYPYEYEGGHIKSAVNLPLERDAETFLLQSPMVPCSLDKRIILIFHCEFSSERGPRMCRFIRERDRAANDYPNLFYPEMYILKGGYKEFFPQHPNFCEPQDYRPMHHEAFKDELRAFRLKTRSWAGERSRRELCSRLQEQ
SIO_010081: CDC25B
subclass of: SO_0000673
so part of: CDC25B
location: complement(join(1071792..1071932,1072073..1072184,1072911..1073044,1073235..1073333,1073470..1073532,1073929..1074024,1074115..1074294,1074792..1074926,1075022..1075144,1075263..1075388,1075587..1075623,1075716..1075757,1077353..1077404,1077995..1078052))
location: region:1071792-1078052:-1
so has part: feature:1077995-1078052:-1:exon
so has part: feature:1077353-1077404:-1:exon
so has part: feature:1075716-1075757:-1:exon
so has part: feature:1075587-1075623:-1:exon
so has part: feature:1075263-1075388:-1:exon
so has part: feature:1075022-1075144:-1:exon
so has part: feature:1074792-1074926:-1:exon
so has part: feature:1074115-1074294:-1:exon
so has part: feature:1073929-1074024:-1:exon
so has part: feature:1073470-1073532:-1:exon
so has part: feature:1073235-1073333:-1:exon
so has part: feature:1072911-1073044:-1:exon
so has part: feature:1072073-1072184:-1:exon
so has part: feature:1071792-1071932:-1:exon

XP_012784741.1
type: Protein
SIO_000068: ncbiprotein

position:1078052:-1
position: 1078052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077995-1078052:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077353-1077404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075716-1075757:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075587-1075623:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1075263-1075388:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075022-1075144:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074792-1074926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1074115-1074294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1073929-1074024:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1073470-1073532:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1073235-1073333:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072911-1073044:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1072073-1072184:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1071792-1071932:-1:exon

CENPB
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CENPB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1089795..1091651
location: region:1089795-1091651:1
so has part: feature:1089795-1091651:1:exon
subclass of: SO_0000010

101519455
type: Gene
SIO_000068: ncbigene

position:1089795:1
position: 1089795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091651:1
position: 1091651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089795-1091651:1:exon

CENPB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CENPB
product: centromere protein B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_004593330.1
SIO_010081: CENPB
subclass of: SO_0000673
so part of: CENPB
location: 1089795..1091651
location: region:1089795-1091651:1
so has part: feature:1089795-1091651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1089795-1091651:1:exon

CENPB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CENPB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major centromere autoantigen B
translation: MGPKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRRRHGVVSCSGVPRARARNAAPRTPAAPASPAAVPSEGSGGGTAGWRAREEQPPSVAEGYASQDVFSATETSLWYDFLPEQAAGLCGAGGSGGGGGDGRARQATQRLSVLLCANADGSEKLPPLVAGKSAKPRAGQAGLPCDYTANSKGGVTTQALAKYLKALDARMAAESRRVLLLAGRLAAQSLDTSGLRHVQLAFFPPGTVHPLERGVVQQVKGHYRQAMLLKAMAALEGQDRSGLQLGLMEALHFVAAAWQAVEPSDIAACFREAGFGGGPNTTITASLKSEGEEEEEEEEEEEEEEEEEEGEGEEEEEEEEEEGEEEEEGGEGEELGEEEEVEEEGDVDDSDEEEEEEEEEEESSSEGLEAEDWAQGVVEAAGSYGGYGAQEEARCPALHFLEGEEDSESDSEEEEGEEEEDDDDDDEDEDEDGDEVPVPSFGEAMAYFAMVKRYLTSFPIDDRVQSHILHLEHDLVHVTRKNHARQAGVRALGHQS
SIO_010081: CENPB
subclass of: SO_0000673
so part of: CENPB
location: 1089795..1091651
location: region:1089795-1091651:1
so has part: feature:1089795-1091651:1:exon

XP_004593387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1089795-1091651:1:exon

SPEF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SPEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1094474..1096848
location: region:1094474-1096848:1
so has part: feature:1094474-1096848:1:exon
subclass of: SO_0000010

101519707
type: Gene
SIO_000068: ncbigene

position:1094474:1
position: 1094474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096848:1
position: 1096848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1094474-1096848:1:exon

SPEF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SPEF1
product: sperm flagellar 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_004593331.1
SIO_010081: SPEF1
subclass of: SO_0000673
so part of: SPEF1
location: join(1094474..1094582,1095039..1095150,1095452..1095608,1095780..1095819,1095931..1095991,1096035..1096188,1096741..1096848)
location: region:1094474-1096848:1
so has part: feature:1094474-1094582:1:exon
so has part: feature:1095039-1095150:1:exon
so has part: feature:1095452-1095608:1:exon
so has part: feature:1095780-1095819:1:exon
so has part: feature:1095931-1095991:1:exon
so has part: feature:1096035-1096188:1:exon
so has part: feature:1096741-1096848:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1094474-1094582:1:exon

position:1094582:1
position: 1094582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1095039-1095150:1:exon

position:1095039:1
position: 1095039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095150:1
position: 1095150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1095452-1095608:1:exon

position:1095452:1
position: 1095452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095608:1
position: 1095608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1095780-1095819:1:exon

position:1095780:1
position: 1095780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095819:1
position: 1095819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1095931-1095991:1:exon

position:1095931:1
position: 1095931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095991:1
position: 1095991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1096035-1096188:1:exon

position:1096035:1
position: 1096035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096188:1
position: 1096188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1096741-1096848:1:exon

position:1096741:1
position: 1096741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPEF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SPEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm flagellar protein 1
translation: MATSVDEEALHQLYLWVDNIPLSRPKRNLSRDFSDGVLVAEVIKFYFPKMVEMHNYVPANSLQQKLSNWGHLNRKVLHKLNFSVPDDVMRKIAQCAPGVVELVLIPLRQRLEERQRRRKQGSGSLQELAPQDGSSYMDVGLSQKAQRESVADPQGGAQLSGHWTKEGAEVLPAHRGTQPPGQGQALQSNPNFVLQIAEKEQELLASQETVQVLQMKVRRLEHLLQLKNVRIEDLSRRLQQAERKQR
SIO_010081: SPEF1
subclass of: SO_0000673
so part of: SPEF1
location: join(1094474..1094582,1095039..1095150,1095452..1095608,1095780..1095819,1095931..1095991,1096035..1096188,1096741..1096848)
location: region:1094474-1096848:1
so has part: feature:1094474-1094582:1:exon
so has part: feature:1095039-1095150:1:exon
so has part: feature:1095452-1095608:1:exon
so has part: feature:1095780-1095819:1:exon
so has part: feature:1095931-1095991:1:exon
so has part: feature:1096035-1096188:1:exon
so has part: feature:1096741-1096848:1:exon

XP_004593388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1094474-1094582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1095039-1095150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1095452-1095608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1095780-1095819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1095931-1095991:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1096035-1096188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1096741-1096848:1:exon

C4AH20orf27
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: C4AH20orf27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1107429..1112335
location: region:1107429-1112335:1
so has part: feature:1107429-1112335:1:exon
subclass of: SO_0000010

101519951
type: Gene
SIO_000068: ncbigene

position:1107429:1
position: 1107429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112335:1
position: 1112335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1107429-1112335:1:exon

C4AH20orf27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: C4AH20orf27
product: chromosome 4A C20orf27 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_036497165.1
SIO_010081: C4AH20orf27
subclass of: SO_0000673
so part of: C4AH20orf27
location: join(1107429..1107453,1108498..1108640,1111126..1111264,1111957..1112079,1112235..1112335)
location: region:1107429-1112335:1
so has part: feature:1107429-1107453:1:exon
so has part: feature:1108498-1108640:1:exon
so has part: feature:1111126-1111264:1:exon
so has part: feature:1111957-1112079:1:exon
so has part: feature:1112235-1112335:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1107429-1107453:1:exon

position:1107453:1
position: 1107453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1108498-1108640:1:exon

position:1108498:1
position: 1108498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108640:1
position: 1108640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1111126-1111264:1:exon

position:1111126:1
position: 1111126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111264:1
position: 1111264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1111957-1112079:1:exon

position:1111957:1
position: 1111957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112079:1
position: 1112079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1112235-1112335:1:exon

position:1112235:1
position: 1112235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C4AH20orf27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: C4AH20orf27
product: chromosome 4A C20orf27 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_004593332.1
SIO_010081: C4AH20orf27
subclass of: SO_0000673
so part of: C4AH20orf27
location: join(1107429..1107447,1108498..1108640,1111126..1111264,1111957..1112079,1112235..1112335)
location: region:1107429-1112335:1
so has part: feature:1107429-1107447:1:exon
so has part: feature:1108498-1108640:1:exon
so has part: feature:1111126-1111264:1:exon
so has part: feature:1111957-1112079:1:exon
so has part: feature:1112235-1112335:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1107429-1107447:1:exon

position:1107447:1
position: 1107447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1108498-1108640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1111126-1111264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1111957-1112079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1112235-1112335:1:exon

C4AH20orf27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: C4AH20orf27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0687 protein C20orf27 homolog isoform X1
translation: MAAANKGECNKARVRSIRFAAGHDAEGSQSHVHFDEKLHDSVVMVTQESDSSFLVKVGFLKILHRYEITFTLPPVHRLSKDVGEAPMSSLHLRLLSVLPVPEGYSVKCEYSAHKEGVLKEEMLLACEGGAGIYVRVTVQARVMDRHHGTPMLLDGVKCVGAELEYDSEHSDWHGFD
SIO_010081: C4AH20orf27
subclass of: SO_0000673
so part of: C4AH20orf27
location: join(1107429..1107453,1108498..1108640,1111126..1111264,1111957..1112079,1112235..1112335)
location: region:1107429-1112335:1
so has part: feature:1107429-1107453:1:exon
so has part: feature:1108498-1108640:1:exon
so has part: feature:1111126-1111264:1:exon
so has part: feature:1111957-1112079:1:exon
so has part: feature:1112235-1112335:1:exon

XP_036353058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1107429-1107453:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1108498-1108640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1111126-1111264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1111957-1112079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1112235-1112335:1:exon

C4AH20orf27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: C4AH20orf27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0687 protein C20orf27 homolog isoform X2
translation: MAAANKGNKARVRSIRFAAGHDAEGSQSHVHFDEKLHDSVVMVTQESDSSFLVKVGFLKILHRYEITFTLPPVHRLSKDVGEAPMSSLHLRLLSVLPVPEGYSVKCEYSAHKEGVLKEEMLLACEGGAGIYVRVTVQARVMDRHHGTPMLLDGVKCVGAELEYDSEHSDWHGFD
SIO_010081: C4AH20orf27
subclass of: SO_0000673
so part of: C4AH20orf27
location: join(1107429..1107447,1108498..1108640,1111126..1111264,1111957..1112079,1112235..1112335)
location: region:1107429-1112335:1
so has part: feature:1107429-1107447:1:exon
so has part: feature:1108498-1108640:1:exon
so has part: feature:1111126-1111264:1:exon
so has part: feature:1111957-1112079:1:exon
so has part: feature:1112235-1112335:1:exon

XP_004593389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1107429-1107447:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1108498-1108640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1111126-1111264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1111957-1112079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1112235-1112335:1:exon

HSPA12B
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: HSPA12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1113745..1122264)
location: region:1113745-1122264:-1
so has part: feature:1113745-1122264:-1:exon
subclass of: SO_0000010

101520201
type: Gene
SIO_000068: ncbigene

position:1113745:-1
position: 1113745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1122264:-1
position: 1122264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113745-1122264:-1:exon

HSPA12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: HSPA12B
product: heat shock protein family A (Hsp70) member 12B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 Protein
transcript id: XM_004593335.1
SIO_010081: HSPA12B
subclass of: SO_0000673
so part of: HSPA12B
location: complement(join(1113745..1114578,1114853..1114956,1115333..1115591,1115688..1115792,1116023..1116109,1116776..1116959,1118261..1118377,1118580..1118684,1118894..1119080,1119506..1119630,1122213..1122264))
location: region:1113745-1122264:-1
so has part: feature:1122213-1122264:-1:exon
so has part: feature:1119506-1119630:-1:exon
so has part: feature:1118894-1119080:-1:exon
so has part: feature:1118580-1118684:-1:exon
so has part: feature:1118261-1118377:-1:exon
so has part: feature:1116776-1116959:-1:exon
so has part: feature:1116023-1116109:-1:exon
so has part: feature:1115688-1115792:-1:exon
so has part: feature:1115333-1115591:-1:exon
so has part: feature:1114853-1114956:-1:exon
so has part: feature:1113745-1114578:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1122213-1122264:-1:exon

position:1122213:-1
position: 1122213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1119506-1119630:-1:exon

position:1119506:-1
position: 1119506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119630:-1
position: 1119630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1118894-1119080:-1:exon

position:1118894:-1
position: 1118894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119080:-1
position: 1119080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1118580-1118684:-1:exon

position:1118580:-1
position: 1118580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118684:-1
position: 1118684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1118261-1118377:-1:exon

position:1118261:-1
position: 1118261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118377:-1
position: 1118377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1116776-1116959:-1:exon

position:1116776:-1
position: 1116776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116959:-1
position: 1116959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1116023-1116109:-1:exon

position:1116023:-1
position: 1116023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116109:-1
position: 1116109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1115688-1115792:-1:exon

position:1115688:-1
position: 1115688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115792:-1
position: 1115792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1115333-1115591:-1:exon

position:1115333:-1
position: 1115333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115591:-1
position: 1115591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1114853-1114956:-1:exon

position:1114853:-1
position: 1114853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114956:-1
position: 1114956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1113745-1114578:-1:exon

position:1114578:-1
position: 1114578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSPA12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: HSPA12B
product: heat shock protein family A (Hsp70) member 12B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein
transcript id: XM_004593334.1
SIO_010081: HSPA12B
subclass of: SO_0000673
so part of: HSPA12B
location: complement(join(1113745..1114578,1114853..1114956,1115333..1115591,1115688..1115792,1116023..1116109,1116776..1116959,1118261..1118374,1118580..1118684,1118894..1119080,1119506..1119630,1120499..1120596,1122213..1122264))
location: region:1113745-1122264:-1
so has part: feature:1122213-1122264:-1:exon
so has part: feature:1120499-1120596:-1:exon
so has part: feature:1119506-1119630:-1:exon
so has part: feature:1118894-1119080:-1:exon
so has part: feature:1118580-1118684:-1:exon
so has part: feature:1118261-1118374:-1:exon
so has part: feature:1116776-1116959:-1:exon
so has part: feature:1116023-1116109:-1:exon
so has part: feature:1115688-1115792:-1:exon
so has part: feature:1115333-1115591:-1:exon
so has part: feature:1114853-1114956:-1:exon
so has part: feature:1113745-1114578:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1122213-1122264:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1120499-1120596:-1:exon

position:1120499:-1
position: 1120499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120596:-1
position: 1120596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1119506-1119630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1118894-1119080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1118580-1118684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1118261-1118374:-1:exon

position:1118374:-1
position: 1118374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1116776-1116959:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1116023-1116109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115688-1115792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115333-1115591:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1114853-1114956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1113745-1114578:-1:exon

HSPA12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: HSPA12B
product: heat shock protein family A (Hsp70) member 12B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 9 Proteins
transcript id: XM_004593333.1
SIO_010081: HSPA12B
subclass of: SO_0000673
so part of: HSPA12B
location: complement(join(1113745..1114578,1114853..1114956,1115333..1115591,1115688..1115792,1116023..1116109,1116776..1116959,1118261..1118377,1118580..1118684,1118894..1119080,1119506..1119630,1120499..1120596,1122213..1122264))
location: region:1113745-1122264:-1
so has part: feature:1122213-1122264:-1:exon
so has part: feature:1120499-1120596:-1:exon
so has part: feature:1119506-1119630:-1:exon
so has part: feature:1118894-1119080:-1:exon
so has part: feature:1118580-1118684:-1:exon
so has part: feature:1118261-1118377:-1:exon
so has part: feature:1116776-1116959:-1:exon
so has part: feature:1116023-1116109:-1:exon
so has part: feature:1115688-1115792:-1:exon
so has part: feature:1115333-1115591:-1:exon
so has part: feature:1114853-1114956:-1:exon
so has part: feature:1113745-1114578:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1122213-1122264:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1120499-1120596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1119506-1119630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1118894-1119080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1118580-1118684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1118261-1118377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1116776-1116959:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1116023-1116109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115688-1115792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115333-1115591:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1114853-1114956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1113745-1114578:-1:exon

HSPA12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: HSPA12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 12B isoform X2
translation: MLAVPELGLQGLYIGSSPERSPVPSPPGSPRTQESCGIAPLTPSQSPKPEPRVLQPAPFSVVVAIDFGTTSSGYAFSFASDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPEGAFHSFGYTARDYYHDLDPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVNGRKMPALEVFAHALRFFKEHALQLQEQCPSLPKRDAVRWVLTVPAIWKQPAKQFMREAAYLAGLVSREDADQLLIALEPEAASVYCRKLRLHQLLDLSSRTPGGGGGGRLGERRSIDSSFRQAREQLRRSRHSRTFLVESGVGELWAEMQAGDRYVVADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDFIATFKRQRPAAWVDLTIAFEARKRTAGPHRSGALNISLPFSFIDFYRKQRGHNVETALRRSSVNFVKWSSQGMLRMSCEAMNELFQPTVSGIIQHIEALLARPEVQGVKLLFLVGGFAESAVLQQAVQASLGARGLRVVVPHDVGLTILKGAVLFGQAPGVVRVRRSPLTYGVGVLNRFVAGRHPPEKLLVRDGRRWCTDVFERFVAAEQSVALGEEVRRSYCPARPGQRRVLINLYCCAAEDANFITDPGVRKCGALSLELEPAEDGTSAPPGRREIRAAMQFGDTEIKVTAVDVSTNRSVRAAIDFLSN
SIO_010081: HSPA12B
subclass of: SO_0000673
so part of: HSPA12B
location: complement(join(1113932..1114578,1114853..1114956,1115333..1115591,1115688..1115792,1116023..1116109,1116776..1116959,1118261..1118374,1118580..1118684,1118894..1119080,1119506..1119630,1120499..1120596,1122213..1122255))
location: region:1113932-1122255:-1
so has part: feature:1122213-1122255:-1:exon
so has part: feature:1120499-1120596:-1:exon
so has part: feature:1119506-1119630:-1:exon
so has part: feature:1118894-1119080:-1:exon
so has part: feature:1118580-1118684:-1:exon
so has part: feature:1118261-1118374:-1:exon
so has part: feature:1116776-1116959:-1:exon
so has part: feature:1116023-1116109:-1:exon
so has part: feature:1115688-1115792:-1:exon
so has part: feature:1115333-1115591:-1:exon
so has part: feature:1114853-1114956:-1:exon
so has part: feature:1113932-1114578:-1:exon

XP_004593391.1
type: Protein
SIO_000068: ncbiprotein

position:1113932:-1
position: 1113932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1122255:-1
position: 1122255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1122213-1122255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1120499-1120596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1119506-1119630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1118894-1119080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1118580-1118684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1118261-1118374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1116776-1116959:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1116023-1116109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115688-1115792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115333-1115591:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1114853-1114956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1113932-1114578:-1:exon

HSPA12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: HSPA12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 12B isoform X1
translation: MLAVPELGLQGLYIGSSPERSPVPSPPGSPRTQESCGIAPLTPSQSPKPEPRVLQPAPFSVVVAIDFGTTSSGYAFSFASDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPEGAFHSFGYTARDYYHDLDPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVNGRKMPALEVFAHALRFFKEHALQELQEQCPSLPKRDAVRWVLTVPAIWKQPAKQFMREAAYLAGLVSREDADQLLIALEPEAASVYCRKLRLHQLLDLSSRTPGGGGGGRLGERRSIDSSFRQAREQLRRSRHSRTFLVESGVGELWAEMQAGDRYVVADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDFIATFKRQRPAAWVDLTIAFEARKRTAGPHRSGALNISLPFSFIDFYRKQRGHNVETALRRSSVNFVKWSSQGMLRMSCEAMNELFQPTVSGIIQHIEALLARPEVQGVKLLFLVGGFAESAVLQQAVQASLGARGLRVVVPHDVGLTILKGAVLFGQAPGVVRVRRSPLTYGVGVLNRFVAGRHPPEKLLVRDGRRWCTDVFERFVAAEQSVALGEEVRRSYCPARPGQRRVLINLYCCAAEDANFITDPGVRKCGALSLELEPAEDGTSAPPGRREIRAAMQFGDTEIKVTAVDVSTNRSVRAAIDFLSN
SIO_010081: HSPA12B
subclass of: SO_0000673
so part of: HSPA12B
location: complement(join(1113932..1114578,1114853..1114956,1115333..1115591,1115688..1115792,1116023..1116109,1116776..1116959,1118261..1118377,1118580..1118684,1118894..1119080,1119506..1119630,1120499..1120596,1122213..1122255))
location: region:1113932-1122255:-1
so has part: feature:1122213-1122255:-1:exon
so has part: feature:1120499-1120596:-1:exon
so has part: feature:1119506-1119630:-1:exon
so has part: feature:1118894-1119080:-1:exon
so has part: feature:1118580-1118684:-1:exon
so has part: feature:1118261-1118377:-1:exon
so has part: feature:1116776-1116959:-1:exon
so has part: feature:1116023-1116109:-1:exon
so has part: feature:1115688-1115792:-1:exon
so has part: feature:1115333-1115591:-1:exon
so has part: feature:1114853-1114956:-1:exon
so has part: feature:1113932-1114578:-1:exon

XP_004593390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1122213-1122255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1120499-1120596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1119506-1119630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1118894-1119080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1118580-1118684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1118261-1118377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1116776-1116959:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1116023-1116109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115688-1115792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115333-1115591:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1114853-1114956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1113932-1114578:-1:exon

HSPA12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: HSPA12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 12B isoform X3
translation: MMRKWEGGDPGVAHQKTPTCLLLTPEGAFHSFGYTARDYYHDLDPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVNGRKMPALEVFAHALRFFKEHALQELQEQCPSLPKRDAVRWVLTVPAIWKQPAKQFMREAAYLAGLVSREDADQLLIALEPEAASVYCRKLRLHQLLDLSSRTPGGGGGGRLGERRSIDSSFRQAREQLRRSRHSRTFLVESGVGELWAEMQAGDRYVVADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDFIATFKRQRPAAWVDLTIAFEARKRTAGPHRSGALNISLPFSFIDFYRKQRGHNVETALRRSSVNFVKWSSQGMLRMSCEAMNELFQPTVSGIIQHIEALLARPEVQGVKLLFLVGGFAESAVLQQAVQASLGARGLRVVVPHDVGLTILKGAVLFGQAPGVVRVRRSPLTYGVGVLNRFVAGRHPPEKLLVRDGRRWCTDVFERFVAAEQSVALGEEVRRSYCPARPGQRRVLINLYCCAAEDANFITDPGVRKCGALSLELEPAEDGTSAPPGRREIRAAMQFGDTEIKVTAVDVSTNRSVRAAIDFLSN
SIO_010081: HSPA12B
subclass of: SO_0000673
so part of: HSPA12B
location: complement(join(1113932..1114578,1114853..1114956,1115333..1115591,1115688..1115792,1116023..1116109,1116776..1116959,1118261..1118377,1118580..1118684,1118894..1119080,1119506..1119513))
location: region:1113932-1119513:-1
so has part: feature:1119506-1119513:-1:exon
so has part: feature:1118894-1119080:-1:exon
so has part: feature:1118580-1118684:-1:exon
so has part: feature:1118261-1118377:-1:exon
so has part: feature:1116776-1116959:-1:exon
so has part: feature:1116023-1116109:-1:exon
so has part: feature:1115688-1115792:-1:exon
so has part: feature:1115333-1115591:-1:exon
so has part: feature:1114853-1114956:-1:exon
so has part: feature:1113932-1114578:-1:exon

XP_004593392.1
type: Protein
SIO_000068: ncbiprotein

position:1119513:-1
position: 1119513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1119506-1119513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1118894-1119080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1118580-1118684:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1118261-1118377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1116776-1116959:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1116023-1116109:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1115688-1115792:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1115333-1115591:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1114853-1114956:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1113932-1114578:-1:exon

SIGLEC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SIGLEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1144328..1157924
location: region:1144328-1157924:1
so has part: feature:1144328-1157924:1:exon
subclass of: SO_0000010

101534157
type: Gene
SIO_000068: ncbigene

position:1144328:1
position: 1144328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157924:1
position: 1157924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144328-1157924:1:exon

SIGLEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SIGLEC1
product: sialic acid binding Ig like lectin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_004593381.1
SIO_010081: SIGLEC1
subclass of: SO_0000673
so part of: SIGLEC1
location: join(1144328..1144376,1145099..1145461,1145707..1146003,1147306..1147572,1147880..1148134,1148890..1149189,1149755..1150012,1150707..1151033,1151317..1151574,1151690..1151992,1152950..1153210,1153351..1153662,1154342..1154593,1154827..1155096,1155196..1155447,1155700..1156002,1156455..1156715,1157197..1157499,1157707..1157924)
location: region:1144328-1157924:1
so has part: feature:1144328-1144376:1:exon
so has part: feature:1145099-1145461:1:exon
so has part: feature:1145707-1146003:1:exon
so has part: feature:1147306-1147572:1:exon
so has part: feature:1147880-1148134:1:exon
so has part: feature:1148890-1149189:1:exon
so has part: feature:1149755-1150012:1:exon
so has part: feature:1150707-1151033:1:exon
so has part: feature:1151317-1151574:1:exon
so has part: feature:1151690-1151992:1:exon
so has part: feature:1152950-1153210:1:exon
so has part: feature:1153351-1153662:1:exon
so has part: feature:1154342-1154593:1:exon
so has part: feature:1154827-1155096:1:exon
so has part: feature:1155196-1155447:1:exon
so has part: feature:1155700-1156002:1:exon
so has part: feature:1156455-1156715:1:exon
so has part: feature:1157197-1157499:1:exon
so has part: feature:1157707-1157924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1144328-1144376:1:exon

position:1144376:1
position: 1144376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1145099-1145461:1:exon

position:1145099:1
position: 1145099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145461:1
position: 1145461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1145707-1146003:1:exon

position:1145707:1
position: 1145707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146003:1
position: 1146003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1147306-1147572:1:exon

position:1147306:1
position: 1147306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147572:1
position: 1147572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1147880-1148134:1:exon

position:1147880:1
position: 1147880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148134:1
position: 1148134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1148890-1149189:1:exon

position:1148890:1
position: 1148890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149189:1
position: 1149189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1149755-1150012:1:exon

position:1149755:1
position: 1149755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150012:1
position: 1150012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1150707-1151033:1:exon

position:1150707:1
position: 1150707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151033:1
position: 1151033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1151317-1151574:1:exon

position:1151317:1
position: 1151317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151574:1
position: 1151574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1151690-1151992:1:exon

position:1151690:1
position: 1151690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151992:1
position: 1151992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1152950-1153210:1:exon

position:1152950:1
position: 1152950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153210:1
position: 1153210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1153351-1153662:1:exon

position:1153351:1
position: 1153351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153662:1
position: 1153662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1154342-1154593:1:exon

position:1154342:1
position: 1154342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154593:1
position: 1154593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1154827-1155096:1:exon

position:1154827:1
position: 1154827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155096:1
position: 1155096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1155196-1155447:1:exon

position:1155196:1
position: 1155196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155447:1
position: 1155447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1155700-1156002:1:exon

position:1155700:1
position: 1155700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156002:1
position: 1156002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1156455-1156715:1:exon

position:1156455:1
position: 1156455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156715:1
position: 1156715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1157197-1157499:1:exon

position:1157197:1
position: 1157197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157499:1
position: 1157499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1157707-1157924:1:exon

position:1157707:1
position: 1157707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIGLEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SIGLEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sialoadhesin
translation: MAFPLRLLLLFPLLPSGRASWGVSSPRTVQGVRGSCLLIPCIFSFPDSVQVTDKGITTIWYYDYWGSRQVVTHSADPKLVEARFQGRAQLLGNTKHYTCNLLLRDLKPEDSGTYNFRFEISEGNRWSDVQGTSVTVTEEPVVPTISFPTELREGMAVDLNCSTPYACLEGQISLQWQGQDPSRSVTSNHLSLEPTGISHLQTLHMALTWEDHDRALHCQLSVANRKVQAETRLHVQYAPKGVQVLLSPSDRNILPGDLVTLTCLVNASYPEVNFVQWTKDGLHLEAKGRVLQLSQVAWSDAGVYTCRAGNRVGSSVSPPLSLHVFMAEVQVRPAGPFLEMQAVTLLCNTPSEGPSELHYSWYKNQVLLQGAHAHALLLPSASRADTGFYACEVQNAQGRERSGPVSVVVNHAPLVPELTAFLETQTGLMGILHCSVVSEPLATLTLSHRGLILASSTGENDPGPRFSISLAPNALHLEIRNLEPADDGEYECSATNSLGNSTTTLDFHANVARLLISPAAQVVEGQVVTLSCSSGLAPTSDARFSWYRNGVLLLEGPSSSLLLPTVSSSDAGSYYCRAQDGLSASGPSSPAILTVLHPPRRPALTAHLDLEAAEAGSGQRGLLSCQVDSDPPAQLRLLHETRVVATSLPPGGSCATCSPRVKVTSAPNSLRVEIREPVLEDEGEYVCEANNTLGSASASVSFNAKATVVVIRPSETPREGVEVNLKCVVSREAVGSPANFSWLRNEEPWAQGPLETVTLLPVARTDAGRYACRILTEAHTHLSAPAVLTVLYPPDPPKLSALLDVAQGHMAVFACTVDSWPLAHLALFRGELLLASSRGHQLPSHGRLRAKATANSLQLELRELDLGDSGNYRCEATNTLGSANASLFFQVRGAWVQVDPSPELQEGQAVVLSCHLPAGTAEGISYRWYRDGQPLEDANSATLRLVAITLKQAGAYHCQAQAPGTATASLAAPVVLHVSYAPRQATLTALLDAGPGHLGLLLCRVESDPPAQLRLLHGDSLVASTNQGVGEPAGSSPRLQVAVAPNTLRLEIHGAGLEDEGTYTCEATSVLGQASASTDFDAQAVSVHVWPTASVQEGQQVNLTCLVWTSDLAPLTYTWYRGSQQQPGGRSILLPNATASDAASYRCGVESHGRPSRLSRPVTLEVLYGPRNQHLTYLLESHGGRLVLILCTVDSHPPAQLAISHAGHLLASSTEGSGPNSLRLELREPRPSDEGLYICSAHNPLGQTNTSLELRLEGVQVTLVPSATVPEGAAVTVTCEDPAAQLPALYVWYYNGRWLQEGPVDSLVFPEAKQAHAGAYSCQVQDAQGTRSSRPAALQVLYAPRNAVLSSSWDSRTALVAVLQCTVDSEPPAELTLSLDGEVLATSHGANGSATGMGRVQVARNALWLHVQNATAGDGSTYVCTARNLLGSASTTGQLQASGGHVVANPGLDVPEGAALNLSCHFPGGPGPVDNSTVTWFWNGRPLHMEPLPTLTFSHVARAQAGLYHCRAELPTGSTTAAPVLLRVLYPPTMPTLTSFLEPEGGLQGILDCQVDSEPAASLTLHLGSQLVASSQLRGDPGQGRIRVSAWPNALRVQVEELQPGDQGEYVCAASNALGSSSASAYFGTRALHRLHLFQQLLWGLGLLASLFGLLLGLGACLAWRWVDGKAGPAASSSSPASSNPRFFRGTSFCQVHGLHPS
SIO_010081: SIGLEC1
subclass of: SO_0000673
so part of: SIGLEC1
location: join(1144328..1144376,1145099..1145461,1145707..1146003,1147306..1147572,1147880..1148134,1148890..1149189,1149755..1150012,1150707..1151033,1151317..1151574,1151690..1151992,1152950..1153210,1153351..1153662,1154342..1154593,1154827..1155096,1155196..1155447,1155700..1156002,1156455..1156715,1157197..1157499,1157707..1157924)
location: region:1144328-1157924:1
so has part: feature:1144328-1144376:1:exon
so has part: feature:1145099-1145461:1:exon
so has part: feature:1145707-1146003:1:exon
so has part: feature:1147306-1147572:1:exon
so has part: feature:1147880-1148134:1:exon
so has part: feature:1148890-1149189:1:exon
so has part: feature:1149755-1150012:1:exon
so has part: feature:1150707-1151033:1:exon
so has part: feature:1151317-1151574:1:exon
so has part: feature:1151690-1151992:1:exon
so has part: feature:1152950-1153210:1:exon
so has part: feature:1153351-1153662:1:exon
so has part: feature:1154342-1154593:1:exon
so has part: feature:1154827-1155096:1:exon
so has part: feature:1155196-1155447:1:exon
so has part: feature:1155700-1156002:1:exon
so has part: feature:1156455-1156715:1:exon
so has part: feature:1157197-1157499:1:exon
so has part: feature:1157707-1157924:1:exon

XP_004593438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1144328-1144376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145099-1145461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1145707-1146003:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147306-1147572:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1147880-1148134:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1148890-1149189:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1149755-1150012:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1150707-1151033:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1151317-1151574:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1151690-1151992:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1152950-1153210:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1153351-1153662:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1154342-1154593:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1154827-1155096:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1155196-1155447:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1155700-1156002:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1156455-1156715:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1157197-1157499:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1157707-1157924:1:exon

ADAM33
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ADAM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1162305..1172437
location: region:1162305-1172437:1
so has part: feature:1162305-1172437:1:exon
subclass of: SO_0000010

101534406
type: Gene
SIO_000068: ncbigene

position:1162305:1
position: 1162305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172437:1
position: 1172437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1162305-1172437:1:exon

ADAM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ADAM33
product: ADAM metallopeptidase domain 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_012929277.1
SIO_010081: ADAM33
subclass of: SO_0000673
so part of: ADAM33
location: join(1162305..1162676,1162760..1162847,1164260..1164336,1167088..1167176,1167406..1167481,1167612..1167688,1167758..1167947,1168138..1168203,1168296..1168367,1168487..1168653,1168754..1168838,1168921..1169063,1169467..1169644,1169767..1169856,1170004..1170199,1170292..1170400,1170497..1170695,1170773..1170850,1170946..1171054,1171143..1171296,1172143..1172234,1172400..1172437)
location: region:1162305-1172437:1
so has part: feature:1162305-1162676:1:exon
so has part: feature:1162760-1162847:1:exon
so has part: feature:1164260-1164336:1:exon
so has part: feature:1167088-1167176:1:exon
so has part: feature:1167406-1167481:1:exon
so has part: feature:1167612-1167688:1:exon
so has part: feature:1167758-1167947:1:exon
so has part: feature:1168138-1168203:1:exon
so has part: feature:1168296-1168367:1:exon
so has part: feature:1168487-1168653:1:exon
so has part: feature:1168754-1168838:1:exon
so has part: feature:1168921-1169063:1:exon
so has part: feature:1169467-1169644:1:exon
so has part: feature:1169767-1169856:1:exon
so has part: feature:1170004-1170199:1:exon
so has part: feature:1170292-1170400:1:exon
so has part: feature:1170497-1170695:1:exon
so has part: feature:1170773-1170850:1:exon
so has part: feature:1170946-1171054:1:exon
so has part: feature:1171143-1171296:1:exon
so has part: feature:1172143-1172234:1:exon
so has part: feature:1172400-1172437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1162305-1162676:1:exon

position:1162676:1
position: 1162676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1162760-1162847:1:exon

position:1162760:1
position: 1162760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162847:1
position: 1162847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1164260-1164336:1:exon

position:1164260:1
position: 1164260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164336:1
position: 1164336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1167088-1167176:1:exon

position:1167088:1
position: 1167088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167176:1
position: 1167176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1167406-1167481:1:exon

position:1167406:1
position: 1167406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167481:1
position: 1167481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1167612-1167688:1:exon

position:1167612:1
position: 1167612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167688:1
position: 1167688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1167758-1167947:1:exon

position:1167758:1
position: 1167758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167947:1
position: 1167947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1168138-1168203:1:exon

position:1168138:1
position: 1168138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168203:1
position: 1168203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1168296-1168367:1:exon

position:1168296:1
position: 1168296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168367:1
position: 1168367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1168487-1168653:1:exon

position:1168487:1
position: 1168487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168653:1
position: 1168653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1168754-1168838:1:exon

position:1168754:1
position: 1168754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168838:1
position: 1168838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1168921-1169063:1:exon

position:1168921:1
position: 1168921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1169063:1
position: 1169063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1169467-1169644:1:exon

position:1169467:1
position: 1169467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1169644:1
position: 1169644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1169767-1169856:1:exon

position:1169767:1
position: 1169767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1169856:1
position: 1169856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1170004-1170199:1:exon

position:1170004:1
position: 1170004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170199:1
position: 1170199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1170292-1170400:1:exon

position:1170292:1
position: 1170292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170400:1
position: 1170400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1170497-1170695:1:exon

position:1170497:1
position: 1170497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170695:1
position: 1170695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1170773-1170850:1:exon

position:1170773:1
position: 1170773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170850:1
position: 1170850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1170946-1171054:1:exon

position:1170946:1
position: 1170946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171054:1
position: 1171054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1171143-1171296:1:exon

position:1171143:1
position: 1171143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171296:1
position: 1171296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1172143-1172234:1:exon

position:1172143:1
position: 1172143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172234:1
position: 1172234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1172400-1172437:1:exon

position:1172400:1
position: 1172400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADAM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ADAM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 33
translation: MRSGSGALVHALRSLSLGVSGHIASAGHQAPRRTATPAWLPPSRDRGQAGREAVLVELRGALRTDRLSATGGVQARAASPARCSPTLQRHTGPRDQRGAGRGGLDPRLLRSLPALSPSTAAVLWIAWGSRPPPPLLLLLLLLPKPGPGTWVPRGGDPGEPATPRWVLDGRPGPVVTQELCLPSAVSPPRHRHRLQPPPIMSQGHWTLPLLLAPGYTETHYSPDGQLVVQARSHTDLCHYHGQVRGFPDSWVALSTCSGLSGLIVLSCNTTYYLRPKAPGDPKEASTHTIFRIQQLLTWKGACGHRDPREKAGMTSHPTVSQNRDRRGVGRSTKYLELYLVADHTLFLIRHRNVNRTKERLLEVASYVDQILRTLDIRVVLSGLEVWNEQDQSQVTPDANATLWAFLRWRRGLWARRPHDSAQLLTGRPFRGATVGLAPIEGMCGAESSGGVSTDHSELPLGSAATMAHEIGHSLGLSHDPDGCCEEAAREPGGCVMAAATGHPFPRVFSACSRRQLRAFFRKGGGACLADIPDPELLVRPARCGNGFVEAGEECDCGSGQECPELCCFAHNCSLHAGAQCAQGACCARCLLRPAGTPCRTAVGDCDLPEFCTGSSPHCPPDVYLLDGSPCAGGHGYCRDGACPTLEQQCQQLWGPGSRAAPEACFQVVNSAGDAHGNCDQDAEAGVAPQAKRDAWCGRLQCQGGDPGRLPPHTVPVDSTVHLEGGEVACRGLFPPPDAQPQLLDLGLVEAGTQCGPGMVCQDRRCQNVSFPELQRCAAACHHRGVCNSNGNCHCSPGWAPPFCDKPGLGGSVDSGPAQADNRGDAFLVGTILSFLLPLLPGAGLAWCRYRLLASRHQRCPWGCCRKDPSHSGPKDSPGQEYPLGSIHPTELDPTASAEPRPPEPENPAKTQQPP
SIO_010081: ADAM33
subclass of: SO_0000673
so part of: ADAM33
location: join(1162305..1162676,1162760..1162847,1164260..1164336,1167088..1167176,1167406..1167481,1167612..1167688,1167758..1167947,1168138..1168203,1168296..1168367,1168487..1168653,1168754..1168838,1168921..1169063,1169467..1169644,1169767..1169856,1170004..1170199,1170292..1170400,1170497..1170695,1170773..1170850,1170946..1171054,1171143..1171296,1172143..1172234,1172400..1172437)
location: region:1162305-1172437:1
so has part: feature:1162305-1162676:1:exon
so has part: feature:1162760-1162847:1:exon
so has part: feature:1164260-1164336:1:exon
so has part: feature:1167088-1167176:1:exon
so has part: feature:1167406-1167481:1:exon
so has part: feature:1167612-1167688:1:exon
so has part: feature:1167758-1167947:1:exon
so has part: feature:1168138-1168203:1:exon
so has part: feature:1168296-1168367:1:exon
so has part: feature:1168487-1168653:1:exon
so has part: feature:1168754-1168838:1:exon
so has part: feature:1168921-1169063:1:exon
so has part: feature:1169467-1169644:1:exon
so has part: feature:1169767-1169856:1:exon
so has part: feature:1170004-1170199:1:exon
so has part: feature:1170292-1170400:1:exon
so has part: feature:1170497-1170695:1:exon
so has part: feature:1170773-1170850:1:exon
so has part: feature:1170946-1171054:1:exon
so has part: feature:1171143-1171296:1:exon
so has part: feature:1172143-1172234:1:exon
so has part: feature:1172400-1172437:1:exon

XP_012784731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1162305-1162676:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1162760-1162847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1164260-1164336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1167088-1167176:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1167406-1167481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1167612-1167688:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1167758-1167947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1168138-1168203:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1168296-1168367:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1168487-1168653:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1168754-1168838:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1168921-1169063:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1169467-1169644:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1169767-1169856:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1170004-1170199:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1170292-1170400:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1170497-1170695:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1170773-1170850:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1170946-1171054:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1171143-1171296:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1172143-1172234:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1172400-1172437:1:exon

LOC101534894
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101534894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1183482..1187700
location: region:1183482-1187700:1
so has part: feature:1183482-1187700:1:exon
subclass of: SO_0000010

101534894
type: Gene
SIO_000068: ncbigene

position:1183482:1
position: 1183482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187700:1
position: 1187700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183482-1187700:1:exon

LOC101534894
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101534894
product: cystatin-11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004593384.2
SIO_010081: LOC101534894
subclass of: SO_0000673
so part of: LOC101534894
location: join(1183482..1183706,1184837..1184941,1187518..1187700)
location: region:1183482-1187700:1
so has part: feature:1183482-1183706:1:exon
so has part: feature:1184837-1184941:1:exon
so has part: feature:1187518-1187700:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1183482-1183706:1:exon

position:1183706:1
position: 1183706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1184837-1184941:1:exon

position:1184837:1
position: 1184837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184941:1
position: 1184941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1187518-1187700:1:exon

position:1187518:1
position: 1187518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101534894
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101534894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cystatin-11
translation: MARPWQVPQLLLAILVALLAVTQQSRRRSFVTVYEVSAVEEPVLGCLRFVTNEYNKQSDDKYNFRIIRILRILKQVTDHLEYHMNVEMWRTTCLKLDPKPCDFQQGELYKHIQCFFAVFADPWIEKFKILKQNCSSI
SIO_010081: LOC101534894
subclass of: SO_0000673
so part of: LOC101534894
location: join(1183482..1183706,1184837..1184941,1187518..1187601)
location: region:1183482-1187601:1
so has part: feature:1183482-1183706:1:exon
so has part: feature:1184837-1184941:1:exon
so has part: feature:1187518-1187601:1:exon

XP_004593441.1
type: Protein
SIO_000068: ncbiprotein

position:1187601:1
position: 1187601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183482-1183706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1184837-1184941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187518-1187601:1:exon

LOC101535136
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101535136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1195908..1199617
location: region:1195908-1199617:1
so has part: feature:1195908-1199617:1:exon
subclass of: SO_0000010

101535136
type: Gene
SIO_000068: ncbigene

position:1195908:1
position: 1195908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199617:1
position: 1199617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1195908-1199617:1:exon

LOC101535136
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101535136
product: cystatin-12-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004593385.3
SIO_010081: LOC101535136
subclass of: SO_0000673
so part of: LOC101535136
location: join(1195908..1196256,1198489..1198599,1199428..1199617)
location: region:1195908-1199617:1
so has part: feature:1195908-1196256:1:exon
so has part: feature:1198489-1198599:1:exon
so has part: feature:1199428-1199617:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1195908-1196256:1:exon

position:1196256:1
position: 1196256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1198489-1198599:1:exon

position:1198489:1
position: 1198489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198599:1
position: 1198599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1199428-1199617:1:exon

position:1199428:1
position: 1199428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101535136
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101535136
product: cystatin-12-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012929292.2
SIO_010081: LOC101535136
subclass of: SO_0000673
so part of: LOC101535136
location: join(1195908..1196256,1198486..1198599,1199428..1199616)
location: region:1195908-1199616:1
so has part: feature:1195908-1196256:1:exon
so has part: feature:1198486-1198599:1:exon
so has part: feature:1199428-1199616:1:exon

position:1199616:1
position: 1199616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1195908-1196256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1198486-1198599:1:exon

position:1198486:1
position: 1198486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1199428-1199616:1:exon

LOC101535136
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101535136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cystatin-12-like isoform X1
translation: MLLSPVSHMSPAPRAAMLHKALLLVGFVLMGSLVGSFKFMDNSKFVDIDKNSEFFANSMEYVVYKFNEAQEDEFAYKFLKVRHSQRKQMFSWTCLVDLEMGRTICKKHDEDIDNCPLQEGAGEKQVRCTYILTSLVWLTQFTVLDSSCVLTSEGGVHVASSSNPVPS
SIO_010081: LOC101535136
subclass of: SO_0000673
so part of: LOC101535136
location: join(1195996..1196256,1198486..1198599,1199428..1199556)
location: region:1195996-1199556:1
so has part: feature:1195996-1196256:1:exon
so has part: feature:1198486-1198599:1:exon
so has part: feature:1199428-1199556:1:exon

XP_012784746.1
type: Protein
SIO_000068: ncbiprotein

position:1195996:1
position: 1195996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199556:1
position: 1199556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1195996-1196256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1198486-1198599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1199428-1199556:1:exon

LOC101535136
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101535136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cystatin-12-like isoform X2
translation: MLLSPVSHMSPAPRAAMLHKALLLVGFVLMGSLVGSFKFMDNSKFVDIDKNSEFFANSMEYVVYKFNEAQEDEFAYKFLKVRHSQRKMFSWTCLVDLEMGRTICKKHDEDIDNCPLQEGAGEKQVRCTYILTSLVWLTQFTVLDSSCVLTSEGGVHVASSSNPVPS
SIO_010081: LOC101535136
subclass of: SO_0000673
so part of: LOC101535136
location: join(1195996..1196256,1198489..1198599,1199428..1199556)
location: region:1195996-1199556:1
so has part: feature:1195996-1196256:1:exon
so has part: feature:1198489-1198599:1:exon
so has part: feature:1199428-1199556:1:exon

XP_004593442.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1195996-1196256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1198489-1198599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1199428-1199556:1:exon

LOC101535390
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101535390
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1230082..1233170)
location: region:1230082-1233170:-1
so has part: feature:1230082-1233170:-1:exon
subclass of: SO_0000010

101535390
type: Gene
SIO_000068: ncbigene

position:1230082:-1
position: 1230082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233170:-1
position: 1233170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230082-1233170:-1:exon

LOC101535390
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101535390
product: cystatin-9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012929297.1
SIO_010081: LOC101535390
subclass of: SO_0000673
so part of: LOC101535390
location: complement(join(1230082..1230366,1231076..1231189,1232856..1233170))
location: region:1230082-1233170:-1
so has part: feature:1232856-1233170:-1:exon
so has part: feature:1231076-1231189:-1:exon
so has part: feature:1230082-1230366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1232856-1233170:-1:exon

position:1232856:-1
position: 1232856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1231076-1231189:-1:exon

position:1231076:-1
position: 1231076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231189:-1
position: 1231189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1230082-1230366:-1:exon

position:1230366:-1
position: 1230366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101535390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101535390
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cystatin-9-like
translation: MSWGPRKKALPWALLPLLLGLQLPRVHTWCSEEQTEIEAKYAKYPYSSVVRFAEEVFNKEMKDEYFYRMERILQFWREKGNFPVVFSTELLLHRTICKKTETDIEDCPFHKGTQFKHVIKCFFTISTTPWLSNYKLIQKDCQEQLL
SIO_010081: LOC101535390
subclass of: SO_0000673
so part of: LOC101535390
location: complement(join(1230277..1230366,1231076..1231189,1232856..1233092))
location: region:1230277-1233092:-1
so has part: feature:1232856-1233092:-1:exon
so has part: feature:1231076-1231189:-1:exon
so has part: feature:1230277-1230366:-1:exon

XP_012784751.1
type: Protein
SIO_000068: ncbiprotein

position:1230277:-1
position: 1230277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233092:-1
position: 1233092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1232856-1233092:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231076-1231189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1230277-1230366:-1:exon

CSTL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CSTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1300390..1305280)
location: region:1300390-1305280:-1
so has part: feature:1300390-1305280:-1:exon
subclass of: SO_0000010

101520771
type: Gene
SIO_000068: ncbigene

position:1300390:-1
position: 1300390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305280:-1
position: 1305280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1300390-1305280:-1:exon

CSTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CSTL1
product: cystatin like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004593336.3
SIO_010081: CSTL1
subclass of: SO_0000673
so part of: CSTL1
location: complement(join(1300390..1300548,1301102..1301212,1304603..1304857,1305140..1305280))
location: region:1300390-1305280:-1
so has part: feature:1305140-1305280:-1:exon
so has part: feature:1304603-1304857:-1:exon
so has part: feature:1301102-1301212:-1:exon
so has part: feature:1300390-1300548:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305140-1305280:-1:exon

position:1305140:-1
position: 1305140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1304603-1304857:-1:exon

position:1304603:-1
position: 1304603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304857:-1
position: 1304857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1301102-1301212:-1:exon

position:1301102:-1
position: 1301102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301212:-1
position: 1301212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1300390-1300548:-1:exon

position:1300548:-1
position: 1300548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CSTL1
product: cystatin like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012929296.2
SIO_010081: CSTL1
subclass of: SO_0000673
so part of: CSTL1
location: complement(join(1300391..1300548,1301095..1301212,1304603..1304857,1305140..1305280))
location: region:1300391-1305280:-1
so has part: feature:1305140-1305280:-1:exon
so has part: feature:1304603-1304857:-1:exon
so has part: feature:1301095-1301212:-1:exon
so has part: feature:1300391-1300548:-1:exon

position:1300391:-1
position: 1300391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305140-1305280:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1304603-1304857:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1301095-1301212:-1:exon

position:1301095:-1
position: 1301095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1300391-1300548:-1:exon

CSTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CSTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cystatin-like 1 isoform X1
translation: MEGGCWRMPLMVLMVLTLAVTLGHFQHWGGFQERPMSKKNMNSTLNFFIQSYNNNSNDTYLFRVQKLLRSQMQLTTGVEYKVTVKIGRTKCKRNSRTNSSCPLQKKKLKKSLICESLIYTVPWINYFRMWNNSCHDN
SIO_010081: CSTL1
subclass of: SO_0000673
so part of: CSTL1
location: complement(join(1300465..1300548,1301102..1301212,1304603..1304821))
location: region:1300465-1304821:-1
so has part: feature:1304603-1304821:-1:exon
so has part: feature:1301102-1301212:-1:exon
so has part: feature:1300465-1300548:-1:exon

XP_004593393.1
type: Protein
SIO_000068: ncbiprotein

position:1300465:-1
position: 1300465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304821:-1
position: 1304821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1304603-1304821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1301102-1301212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1300465-1300548:-1:exon

CSTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CSTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cystatin-like 1 isoform X2
translation: MEGGCWRMPLMVLMVLTLAVTLGHFQHWGGFQERPMSKKNMNSTLNFFIQSYNNNSNDTYLFRVQKLLRSQMQLTTGVEYKVTVKIGRTKCKRNSRTNSSCPLQKKKLKKVTKFDL
SIO_010081: CSTL1
subclass of: SO_0000673
so part of: CSTL1
location: complement(join(1300535..1300548,1301095..1301212,1304603..1304821))
location: region:1300535-1304821:-1
so has part: feature:1304603-1304821:-1:exon
so has part: feature:1301095-1301212:-1:exon
so has part: feature:1300535-1300548:-1:exon

XP_012784750.1
type: Protein
SIO_000068: ncbiprotein

position:1300535:-1
position: 1300535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1304603-1304821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1301095-1301212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1300535-1300548:-1:exon

LOC118760211
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760211
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1328078..1328184)
location: region:1328078-1328184:-1
so has part: feature:1328078-1328184:-1:exon
subclass of: SO_0000623

118760211
type: Gene
SIO_000068: ncbigene

position:1328078:-1
position: 1328078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328184:-1
position: 1328184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1328078-1328184:-1:exon

LOC118760211
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118760211
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996647.1
SIO_010081: LOC118760211
subclass of: SO_0000673
so part of: LOC118760211
location: complement(1328078..1328184)
location: region:1328078-1328184:-1
so has part: feature:1328078-1328184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1328078-1328184:-1:exon

PRNP
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PRNP
note: prion protein; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1397568..1398326
location: region:1397568-1398326:1
so has part: feature:1397568-1398326:1:exon
subclass of: SO_0000010

101521014
type: Gene
SIO_000068: ncbigene

position:1397568:1
position: 1397568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398326:1
position: 1398326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397568-1398326:1:exon

PRNP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PRNP
product: prion protein
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001279818.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001279818.1
SIO_010081: PRNP
subclass of: SO_0000673
so part of: PRNP
location: 1397568..1398326
location: region:1397568-1398326:1
so has part: feature:1397568-1398326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1397568-1398326:1:exon

PRNP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PRNP
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: prion protein precursor
translation: MAHLSYWLLVLFVAAWSDVGLCKKRPKPGGGWNTGGSRYPGQGSPGGNRYPPQGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQGGTHNQWGKPSKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPIIHFGNEYEDRYYRDNMYRYPNQVYYKPVDQYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDIKMMERVVEQMCVTQYQQEYQASYQRAASVVVFSSPPVILLISFLIFLIVG
SIO_010081: PRNP
subclass of: SO_0000673
so part of: PRNP
location: 1397568..1398326
location: region:1397568-1398326:1
so has part: feature:1397568-1398326:1:exon

NP_001266747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1397568-1398326:1:exon

PRNP
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9978
gene: PRNP
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: PRNP
subclass of: SO_0000673
so part of: PRNP
location: 1397568..1397633
location: region:1397568-1397633:1
so has part: feature:1397568-1397633:1:exon

position:1397633:1
position: 1397633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397568-1397633:1:exon

PRND
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PRND
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1411477..1412013
location: region:1411477-1412013:1
so has part: feature:1411477-1412013:1:exon
subclass of: SO_0000010

101521258
type: Gene
SIO_000068: ncbigene

position:1411477:1
position: 1411477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412013:1
position: 1412013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1411477-1412013:1:exon

PRND
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PRND
product: prion like protein doppel
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins
transcript id: XM_004593338.1
SIO_010081: PRND
subclass of: SO_0000673
so part of: PRND
location: 1411477..1412013
location: region:1411477-1412013:1
so has part: feature:1411477-1412013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1411477-1412013:1:exon

PRND
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PRND
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prion-like protein doppel
translation: MRKHLGGWGLAIVCVLLFSLLPTVKARGIKHRIKWNRKALPSTAQITEARVAENRPGTFIRQGQKLSIDFGPEGNKYYEANYWQFPDGIHYDGCSEGNVTKEVFVAKCINATQAANQGEFSREKQNKLHQRVLWRLIKELCSIKHCDFWLERGAGFPVTVGQPMVVLCLLIFTWVLVK
SIO_010081: PRND
subclass of: SO_0000673
so part of: PRND
location: 1411477..1412013
location: region:1411477-1412013:1
so has part: feature:1411477-1412013:1:exon

XP_004593395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1411477-1412013:1:exon

RASSF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RASSF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1443989..1460906)
location: region:1443989-1460906:-1
so has part: feature:1443989-1460906:-1:exon
subclass of: SO_0000010

101521501
type: Gene
SIO_000068: ncbigene

position:1443989:-1
position: 1443989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460906:-1
position: 1460906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1443989-1460906:-1:exon

RASSF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RASSF2
product: Ras association domain family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins
transcript id: XM_004593339.1
SIO_010081: RASSF2
subclass of: SO_0000673
so part of: RASSF2
location: complement(join(1443989..1444058,1444958..1445055,1446123..1446244,1446699..1446750,1449350..1449451,1450120..1450280,1452616..1452704,1454610..1454761,1457683..1457758,1460820..1460906))
location: region:1443989-1460906:-1
so has part: feature:1460820-1460906:-1:exon
so has part: feature:1457683-1457758:-1:exon
so has part: feature:1454610-1454761:-1:exon
so has part: feature:1452616-1452704:-1:exon
so has part: feature:1450120-1450280:-1:exon
so has part: feature:1449350-1449451:-1:exon
so has part: feature:1446699-1446750:-1:exon
so has part: feature:1446123-1446244:-1:exon
so has part: feature:1444958-1445055:-1:exon
so has part: feature:1443989-1444058:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1460820-1460906:-1:exon

position:1460820:-1
position: 1460820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1457683-1457758:-1:exon

position:1457683:-1
position: 1457683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1457758:-1
position: 1457758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1454610-1454761:-1:exon

position:1454610:-1
position: 1454610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454761:-1
position: 1454761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1452616-1452704:-1:exon

position:1452616:-1
position: 1452616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452704:-1
position: 1452704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1450120-1450280:-1:exon

position:1450120:-1
position: 1450120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1450280:-1
position: 1450280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1449350-1449451:-1:exon

position:1449350:-1
position: 1449350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449451:-1
position: 1449451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1446699-1446750:-1:exon

position:1446699:-1
position: 1446699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1446750:-1
position: 1446750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1446123-1446244:-1:exon

position:1446123:-1
position: 1446123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1446244:-1
position: 1446244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1444958-1445055:-1:exon

position:1444958:-1
position: 1444958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445055:-1
position: 1445055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1443989-1444058:-1:exon

position:1444058:-1
position: 1444058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RASSF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RASSF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras association domain-containing protein 2
translation: MDYTPQTSLVPCGQDKYISKNELLVHLKTYNLYYQGQNLQLRHREEEDEFIVEGLLNISWGLRRPIRLQMQDDNERLRPPPSSSSWHSGCNLATPGAILKPLTMPNIQISEVDAPAESEQSLSPTDSRGLKPVQEDTPQLMRTRSDVGVRRRGNVRTPSDQRRIRRHRFSINGHYYNHKTSVFTPAYGSVTNVRINSTMTTPQVLKLLLNKFKIENSAEEFALYVVHTSGEKQKLKATDYPLIARILQGPCEQVSKVFLMEKDQVEEVTYDVAQYIKFEMPVLKSFIQKLQEEEDREVKKLMRKYTVLRLMIRQRLEEIAESPATI
SIO_010081: RASSF2
subclass of: SO_0000673
so part of: RASSF2
location: complement(join(1443989..1444058,1444958..1445055,1446123..1446244,1446699..1446750,1449350..1449451,1450120..1450280,1452616..1452704,1454610..1454761,1457683..1457758,1460820..1460878))
location: region:1443989-1460878:-1
so has part: feature:1460820-1460878:-1:exon
so has part: feature:1457683-1457758:-1:exon
so has part: feature:1454610-1454761:-1:exon
so has part: feature:1452616-1452704:-1:exon
so has part: feature:1450120-1450280:-1:exon
so has part: feature:1449350-1449451:-1:exon
so has part: feature:1446699-1446750:-1:exon
so has part: feature:1446123-1446244:-1:exon
so has part: feature:1444958-1445055:-1:exon
so has part: feature:1443989-1444058:-1:exon

XP_004593396.1
type: Protein
SIO_000068: ncbiprotein

position:1460878:-1
position: 1460878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1460820-1460878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1457683-1457758:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1454610-1454761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1452616-1452704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1450120-1450280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1449350-1449451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1446699-1446750:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1446123-1446244:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1444958-1445055:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1443989-1444058:-1:exon

SLC23A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SLC23A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1500090..1552448)
location: region:1500090-1552448:-1
so has part: feature:1500090-1552448:-1:exon
subclass of: SO_0000010

101521741
type: Gene
SIO_000068: ncbigene

position:1500090:-1
position: 1500090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1552448:-1
position: 1552448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1500090-1552448:-1:exon

SLC23A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SLC23A2
product: solute carrier family 23 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 13 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593340.2
SIO_010081: SLC23A2
subclass of: SO_0000673
so part of: SLC23A2
location: complement(join(1500090..1500421,1502006..1502101,1503801..1503938,1504403..1504532,1509477..1509582,1511190..1511337,1514929..1515085,1515449..1515569,1523017..1523198,1524205..1524275,1525276..1525364,1536183..1536340,1538460..1538576,1542663..1542761,1552338..1552448))
location: region:1500090-1552448:-1
so has part: feature:1552338-1552448:-1:exon
so has part: feature:1542663-1542761:-1:exon
so has part: feature:1538460-1538576:-1:exon
so has part: feature:1536183-1536340:-1:exon
so has part: feature:1525276-1525364:-1:exon
so has part: feature:1524205-1524275:-1:exon
so has part: feature:1523017-1523198:-1:exon
so has part: feature:1515449-1515569:-1:exon
so has part: feature:1514929-1515085:-1:exon
so has part: feature:1511190-1511337:-1:exon
so has part: feature:1509477-1509582:-1:exon
so has part: feature:1504403-1504532:-1:exon
so has part: feature:1503801-1503938:-1:exon
so has part: feature:1502006-1502101:-1:exon
so has part: feature:1500090-1500421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1552338-1552448:-1:exon

position:1552338:-1
position: 1552338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1542663-1542761:-1:exon

position:1542663:-1
position: 1542663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1542761:-1
position: 1542761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1538460-1538576:-1:exon

position:1538460:-1
position: 1538460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1538576:-1
position: 1538576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1536183-1536340:-1:exon

position:1536183:-1
position: 1536183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1536340:-1
position: 1536340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1525276-1525364:-1:exon

position:1525276:-1
position: 1525276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525364:-1
position: 1525364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1524205-1524275:-1:exon

position:1524205:-1
position: 1524205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524275:-1
position: 1524275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1523017-1523198:-1:exon

position:1523017:-1
position: 1523017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523198:-1
position: 1523198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1515449-1515569:-1:exon

position:1515449:-1
position: 1515449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1515569:-1
position: 1515569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1514929-1515085:-1:exon

position:1514929:-1
position: 1514929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1515085:-1
position: 1515085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1511190-1511337:-1:exon

position:1511190:-1
position: 1511190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511337:-1
position: 1511337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1509477-1509582:-1:exon

position:1509477:-1
position: 1509477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509582:-1
position: 1509582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1504403-1504532:-1:exon

position:1504403:-1
position: 1504403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1504532:-1
position: 1504532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1503801-1503938:-1:exon

position:1503801:-1
position: 1503801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1503938:-1
position: 1503938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1502006-1502101:-1:exon

position:1502006:-1
position: 1502006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1502101:-1
position: 1502101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1500090-1500421:-1:exon

position:1500421:-1
position: 1500421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC23A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SLC23A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 23 member 2
translation: MMGIGKNTTPKSMEAGSSTEGKYEDEAKHPTFFTLPVVINGGATSSGEQDNEDTELMAIYTTENGIAEKSSLAETLDSTGSLDPQRSDMIYTIEDVPPWYLCIFLGLQHYLTCFSGTIAVPFLLADAMCVGYDQWATSQLIGTIFFCVGITTLLQTTFGCRLPLFQASAFAFLAPARAILSLDKWKCNTTDVSVVNGTAELLHTEHIWYPRIREIQGAIIMSSLIEVFIGLLGLPGALLRYIGPLTITPTVALIGLSGFQAAGERAGKHWGIAMLTIFLVLLFSQYARNVKFPLPIYKSKKGWTAYKLQLFKMFPIILAILVSWLLCFIFTVTDVFPPDSTKYGFYARTDARQGVLLVAPWFKVPYPFQWGLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAALMLALGMVGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFVDLNSSRNLFVLGFSIFFGLVLPSYLRQNPLVTGITGIDQVLNVLLTTAMFVGGCVAFILDNTIPGTPEERGIRKWKKGVSKGNKSLDGMESYNLPFGMNIIKKYRCFSYLPISPTFVGYTWKAFRKSDNGRSSDEDSRATV
SIO_010081: SLC23A2
subclass of: SO_0000673
so part of: SLC23A2
location: complement(join(1500189..1500421,1502006..1502101,1503801..1503938,1504403..1504532,1509477..1509582,1511190..1511337,1514929..1515085,1515449..1515569,1523017..1523198,1524205..1524275,1525276..1525364,1536183..1536340,1538460..1538576,1542663..1542761,1552338..1552445))
location: region:1500189-1552445:-1
so has part: feature:1552338-1552445:-1:exon
so has part: feature:1542663-1542761:-1:exon
so has part: feature:1538460-1538576:-1:exon
so has part: feature:1536183-1536340:-1:exon
so has part: feature:1525276-1525364:-1:exon
so has part: feature:1524205-1524275:-1:exon
so has part: feature:1523017-1523198:-1:exon
so has part: feature:1515449-1515569:-1:exon
so has part: feature:1514929-1515085:-1:exon
so has part: feature:1511190-1511337:-1:exon
so has part: feature:1509477-1509582:-1:exon
so has part: feature:1504403-1504532:-1:exon
so has part: feature:1503801-1503938:-1:exon
so has part: feature:1502006-1502101:-1:exon
so has part: feature:1500189-1500421:-1:exon

XP_004593397.1
type: Protein
SIO_000068: ncbiprotein

position:1500189:-1
position: 1500189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1552445:-1
position: 1552445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1552338-1552445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1542663-1542761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538460-1538576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1536183-1536340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525276-1525364:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1524205-1524275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1523017-1523198:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1515449-1515569:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1514929-1515085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1511190-1511337:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1509477-1509582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1504403-1504532:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1503801-1503938:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1502006-1502101:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1500189-1500421:-1:exon

LOC118760222
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760222
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1674246..1674348)
location: region:1674246-1674348:-1
so has part: feature:1674246-1674348:-1:exon
subclass of: SO_0000623

118760222
type: Gene
SIO_000068: ncbigene

position:1674246:-1
position: 1674246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674348:-1
position: 1674348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1674246-1674348:-1:exon

LOC118760222
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118760222
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996658.1
SIO_010081: LOC118760222
subclass of: SO_0000673
so part of: LOC118760222
location: complement(1674246..1674348)
location: region:1674246-1674348:-1
so has part: feature:1674246-1674348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1674246-1674348:-1:exon

TMEM230
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TMEM230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1685796..1692460)
location: region:1685796-1692460:-1
so has part: feature:1685796-1692460:-1:exon
subclass of: SO_0000010

101521986
type: Gene
SIO_000068: ncbigene

position:1685796:-1
position: 1685796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1692460:-1
position: 1692460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1685796-1692460:-1:exon

TMEM230
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TMEM230
product: transmembrane protein 230
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004593341.2
SIO_010081: TMEM230
subclass of: SO_0000673
so part of: TMEM230
location: complement(join(1685796..1686829,1691039..1691161,1692359..1692460))
location: region:1685796-1692460:-1
so has part: feature:1692359-1692460:-1:exon
so has part: feature:1691039-1691161:-1:exon
so has part: feature:1685796-1686829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1692359-1692460:-1:exon

position:1692359:-1
position: 1692359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1691039-1691161:-1:exon

position:1691039:-1
position: 1691039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691161:-1
position: 1691161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1685796-1686829:-1:exon

position:1686829:-1
position: 1686829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TMEM230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 230
translation: MMPSRTNLATGIPSSKVKYSRLSSTDDGYIDLQFKKSPPKIPYKAIALATVLFLIGAFLIIIGSLLLAGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDFDD
SIO_010081: TMEM230
subclass of: SO_0000673
so part of: TMEM230
location: complement(join(1686689..1686829,1691039..1691161,1692359..1692457))
location: region:1686689-1692457:-1
so has part: feature:1692359-1692457:-1:exon
so has part: feature:1691039-1691161:-1:exon
so has part: feature:1686689-1686829:-1:exon

XP_004593398.1
type: Protein
SIO_000068: ncbiprotein

position:1686689:-1
position: 1686689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1692457:-1
position: 1692457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1692359-1692457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1691039-1691161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1686689-1686829:-1:exon

CDS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CDS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1704415..1788335
location: region:1704415-1788335:1
so has part: feature:1704415-1788335:1:exon
subclass of: SO_0000010

101522240
type: Gene
SIO_000068: ncbigene

position:1704415:1
position: 1704415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1788335:1
position: 1788335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1704415-1788335:1:exon

CDS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CDS2
product: CDP-diacylglycerol synthase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 10 Proteins
transcript id: XM_004593342.3
SIO_010081: CDS2
subclass of: SO_0000673
so part of: CDS2
location: join(1704415..1704504,1773020..1773156,1774561..1774657,1777490..1777587,1777709..1777848,1779781..1779839,1781447..1781529,1783837..1783924,1784390..1784458,1785317..1785469,1786744..1786863,1787758..1787861,1788101..1788335)
location: region:1704415-1788335:1
so has part: feature:1704415-1704504:1:exon
so has part: feature:1773020-1773156:1:exon
so has part: feature:1774561-1774657:1:exon
so has part: feature:1777490-1777587:1:exon
so has part: feature:1777709-1777848:1:exon
so has part: feature:1779781-1779839:1:exon
so has part: feature:1781447-1781529:1:exon
so has part: feature:1783837-1783924:1:exon
so has part: feature:1784390-1784458:1:exon
so has part: feature:1785317-1785469:1:exon
so has part: feature:1786744-1786863:1:exon
so has part: feature:1787758-1787861:1:exon
so has part: feature:1788101-1788335:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1704415-1704504:1:exon

position:1704504:1
position: 1704504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1773020-1773156:1:exon

position:1773020:1
position: 1773020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1773156:1
position: 1773156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1774561-1774657:1:exon

position:1774561:1
position: 1774561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1774657:1
position: 1774657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1777490-1777587:1:exon

position:1777490:1
position: 1777490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1777587:1
position: 1777587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1777709-1777848:1:exon

position:1777709:1
position: 1777709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1777848:1
position: 1777848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1779781-1779839:1:exon

position:1779781:1
position: 1779781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1779839:1
position: 1779839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1781447-1781529:1:exon

position:1781447:1
position: 1781447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1781529:1
position: 1781529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1783837-1783924:1:exon

position:1783837:1
position: 1783837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783924:1
position: 1783924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1784390-1784458:1:exon

position:1784390:1
position: 1784390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1784458:1
position: 1784458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1785317-1785469:1:exon

position:1785317:1
position: 1785317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785469:1
position: 1785469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1786744-1786863:1:exon

position:1786744:1
position: 1786744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1786863:1
position: 1786863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1787758-1787861:1:exon

position:1787758:1
position: 1787758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1787861:1
position: 1787861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1788101-1788335:1:exon

position:1788101:1
position: 1788101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CDS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate cytidylyltransferase 2
translation: MTELRQRVAREPDAAPEDKESESEAKIDGETASDSESRAELAPPPAPADDTPEVLNRALSNLSSRWKNWWVRGILTLAMIAFFFIIIYLGPMVLMMIVMCVQIKCFHEIITIGYNVYHSYDLPWFRTLSWYFLLCVNYFFYGETVTDYFFTLVQREEPLRILSKYHRFISFTLYLTGFCMFVLSLVKKHYRLQFYMFGWTHVTLLIVVTQSHLVIHNLFEGMIWFIVPISCVICNDIMAYMFGFFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYIMSGYRCFVCPVEYNNDTNSFTVDCEPSDLFRLQEYNIPGVVQSVIGWKTVRMYPFQIHSIALSTFASLIGPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFIRGPNPSKLIQQFLTLRPDQQLHIFNTLKSHLTDKGLLTAAMEDK
SIO_010081: CDS2
subclass of: SO_0000673
so part of: CDS2
location: join(1704448..1704504,1773020..1773156,1774561..1774657,1777490..1777587,1777709..1777848,1779781..1779839,1781447..1781529,1783837..1783924,1784390..1784458,1785317..1785469,1786744..1786863,1787758..1787861,1788101..1788233)
location: region:1704448-1788233:1
so has part: feature:1704448-1704504:1:exon
so has part: feature:1773020-1773156:1:exon
so has part: feature:1774561-1774657:1:exon
so has part: feature:1777490-1777587:1:exon
so has part: feature:1777709-1777848:1:exon
so has part: feature:1779781-1779839:1:exon
so has part: feature:1781447-1781529:1:exon
so has part: feature:1783837-1783924:1:exon
so has part: feature:1784390-1784458:1:exon
so has part: feature:1785317-1785469:1:exon
so has part: feature:1786744-1786863:1:exon
so has part: feature:1787758-1787861:1:exon
so has part: feature:1788101-1788233:1:exon

XP_004593399.1
type: Protein
SIO_000068: ncbiprotein

position:1704448:1
position: 1704448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1788233:1
position: 1788233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1704448-1704504:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1773020-1773156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1774561-1774657:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1777490-1777587:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1777709-1777848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1779781-1779839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1781447-1781529:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1783837-1783924:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1784390-1784458:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1785317-1785469:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1786744-1786863:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1787758-1787861:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1788101-1788233:1:exon

PROKR2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PROKR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1808904..1815564)
location: region:1808904-1815564:-1
so has part: feature:1808904-1815564:-1:exon
subclass of: SO_0000010

101522498
type: Gene
SIO_000068: ncbigene

position:1808904:-1
position: 1808904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815564:-1
position: 1815564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808904-1815564:-1:exon

PROKR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PROKR2
product: prokineticin receptor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 9 Proteins
transcript id: XM_004593343.1
SIO_010081: PROKR2
subclass of: SO_0000673
so part of: PROKR2
location: complement(join(1808904..1809600,1815098..1815564))
location: region:1808904-1815564:-1
so has part: feature:1815098-1815564:-1:exon
so has part: feature:1808904-1809600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1815098-1815564:-1:exon

position:1815098:-1
position: 1815098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1808904-1809600:-1:exon

position:1809600:-1
position: 1809600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PROKR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PROKR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prokineticin receptor 2
translation: MATHNGNTSFAPNFNPPQDHASSPPFNFSYSDYDLPLEEEEDMTKTRTFFAAKIVIGVALAGIMLVCGIGNFLFIAALARYKKLRNLTNLLIANLAISDFLVAIVCCPFEMDYYVVRQLSWQHGHVLCASVNYLRTVSLYVSTNALLAIAIDRYLAIVHPLKPRMNYQTASLLIVAVWAVSLLIAIPSAYFTTETVLLIARSQEKMFCGQIWPVDQQLYYKSYFLFIFGLEFVGPVLTMALCYARISRELWFKAVPGFQTEQIRKRLRCRRRTVLVLMGVLTAYVLCWAPFYGFTLVRDFFPTVFVKEKHYLTAFYVVECIAMSNSMINTICFVAVKNNTIKYFKRMLLLHCRPSHQGSKSSAELDLKTSGMPATEEVDCIRLK
SIO_010081: PROKR2
subclass of: SO_0000673
so part of: PROKR2
location: complement(join(1808904..1809600,1815098..1815555))
location: region:1808904-1815555:-1
so has part: feature:1815098-1815555:-1:exon
so has part: feature:1808904-1809600:-1:exon

XP_004593400.1
type: Protein
SIO_000068: ncbiprotein

position:1815555:-1
position: 1815555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1815098-1815555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1808904-1809600:-1:exon

GPCPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: GPCPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1966962..2026757)
location: region:1966962-2026757:-1
so has part: feature:1966962-2026757:-1:exon
subclass of: SO_0000010

101522744
type: Gene
SIO_000068: ncbigene

position:1966962:-1
position: 1966962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2026757:-1
position: 2026757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1966962-2026757:-1:exon

GPCPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GPCPD1
product: glycerophosphocholine phosphodiesterase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 7 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593344.3
SIO_010081: GPCPD1
subclass of: SO_0000673
so part of: GPCPD1
location: complement(join(1966962..1968312,1972524..1972684,1973170..1973305,1973716..1973852,1976860..1976925,1977989..1978050,1979994..1980033,1980663..1980740,1983149..1983241,1986816..1986870,1988788..1988920,1989683..1989845,1991710..1991941,1995882..1996005,2004730..2004771,2006500..2006575,2012475..2012559,2020113..2020209,2023772..2023848,2026639..2026757))
location: region:1966962-2026757:-1
so has part: feature:2026639-2026757:-1:exon
so has part: feature:2023772-2023848:-1:exon
so has part: feature:2020113-2020209:-1:exon
so has part: feature:2012475-2012559:-1:exon
so has part: feature:2006500-2006575:-1:exon
so has part: feature:2004730-2004771:-1:exon
so has part: feature:1995882-1996005:-1:exon
so has part: feature:1991710-1991941:-1:exon
so has part: feature:1989683-1989845:-1:exon
so has part: feature:1988788-1988920:-1:exon
so has part: feature:1986816-1986870:-1:exon
so has part: feature:1983149-1983241:-1:exon
so has part: feature:1980663-1980740:-1:exon
so has part: feature:1979994-1980033:-1:exon
so has part: feature:1977989-1978050:-1:exon
so has part: feature:1976860-1976925:-1:exon
so has part: feature:1973716-1973852:-1:exon
so has part: feature:1973170-1973305:-1:exon
so has part: feature:1972524-1972684:-1:exon
so has part: feature:1966962-1968312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2026639-2026757:-1:exon

position:2026639:-1
position: 2026639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2023772-2023848:-1:exon

position:2023772:-1
position: 2023772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2023848:-1
position: 2023848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2020113-2020209:-1:exon

position:2020113:-1
position: 2020113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2020209:-1
position: 2020209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2012475-2012559:-1:exon

position:2012475:-1
position: 2012475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2012559:-1
position: 2012559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2006500-2006575:-1:exon

position:2006500:-1
position: 2006500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2006575:-1
position: 2006575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2004730-2004771:-1:exon

position:2004730:-1
position: 2004730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2004771:-1
position: 2004771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1995882-1996005:-1:exon

position:1995882:-1
position: 1995882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1996005:-1
position: 1996005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1991710-1991941:-1:exon

position:1991710:-1
position: 1991710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1991941:-1
position: 1991941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1989683-1989845:-1:exon

position:1989683:-1
position: 1989683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1989845:-1
position: 1989845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1988788-1988920:-1:exon

position:1988788:-1
position: 1988788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1988920:-1
position: 1988920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1986816-1986870:-1:exon

position:1986816:-1
position: 1986816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1986870:-1
position: 1986870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1983149-1983241:-1:exon

position:1983149:-1
position: 1983149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1983241:-1
position: 1983241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1980663-1980740:-1:exon

position:1980663:-1
position: 1980663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1980740:-1
position: 1980740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1979994-1980033:-1:exon

position:1979994:-1
position: 1979994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1980033:-1
position: 1980033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1977989-1978050:-1:exon

position:1977989:-1
position: 1977989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1978050:-1
position: 1978050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1976860-1976925:-1:exon

position:1976860:-1
position: 1976860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1976925:-1
position: 1976925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1973716-1973852:-1:exon

position:1973716:-1
position: 1973716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1973852:-1
position: 1973852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1973170-1973305:-1:exon

position:1973170:-1
position: 1973170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1973305:-1
position: 1973305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1972524-1972684:-1:exon

position:1972524:-1
position: 1972524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1972684:-1
position: 1972684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1966962-1968312:-1:exon

position:1968312:-1
position: 1968312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPCPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GPCPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerophosphocholine phosphodiesterase GPCPD1
translation: MTPCRVTFEIRGTLLPGEVFAICGSCDALGNWNPQSAVTLLPGNETGESMSWKVTVVLNRGTSIQYRYFKGCFLEPKTIGGPCQVIVHKWETHLQPRSITPLESEITIDDGQFGIHNGVETLDSGWLTCQTEIRLRLHYSEKPPVSITKKKLKKSRFRVKLTLEGPEEDDDDRISPTVLHKMSNTLEISLISDHEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSEHIVQGDALPGHVGTACLLSSTIAESGKSAGILTLPIMSRNSRKTIGKVRVDFIIIKPIPGYNCDMRSSFSKYWKPRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKFEDDPVELFEIPVKELTFDQLQLLKLSHVTALKSKDRKESVVEEQSSFLENQPFPSLKMVLDSLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMNLFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPELMDLRSRTTPIAMSFAQFENLLGINAHTEDLLRNPSYVQEARAKGLVVFCWGDDTNDPENRRKLKEFGVNGLVYDRIYDWMPEQPNIFQVEQLERLKQELPELKSCLCPTANRFVPSLCGEPEIHVDANGIESMENA
SIO_010081: GPCPD1
subclass of: SO_0000673
so part of: GPCPD1
location: complement(join(1968126..1968312,1972524..1972684,1973170..1973305,1973716..1973852,1976860..1976925,1977989..1978050,1979994..1980033,1980663..1980740,1983149..1983241,1986816..1986870,1988788..1988920,1989683..1989845,1991710..1991941,1995882..1996005,2004730..2004771,2006500..2006575,2012475..2012559,2020113..2020209,2023772..2023820))
location: region:1968126-2023820:-1
so has part: feature:2023772-2023820:-1:exon
so has part: feature:2020113-2020209:-1:exon
so has part: feature:2012475-2012559:-1:exon
so has part: feature:2006500-2006575:-1:exon
so has part: feature:2004730-2004771:-1:exon
so has part: feature:1995882-1996005:-1:exon
so has part: feature:1991710-1991941:-1:exon
so has part: feature:1989683-1989845:-1:exon
so has part: feature:1988788-1988920:-1:exon
so has part: feature:1986816-1986870:-1:exon
so has part: feature:1983149-1983241:-1:exon
so has part: feature:1980663-1980740:-1:exon
so has part: feature:1979994-1980033:-1:exon
so has part: feature:1977989-1978050:-1:exon
so has part: feature:1976860-1976925:-1:exon
so has part: feature:1973716-1973852:-1:exon
so has part: feature:1973170-1973305:-1:exon
so has part: feature:1972524-1972684:-1:exon
so has part: feature:1968126-1968312:-1:exon

XP_004593401.1
type: Protein
SIO_000068: ncbiprotein

position:1968126:-1
position: 1968126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2023820:-1
position: 2023820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2023772-2023820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2020113-2020209:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2012475-2012559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2006500-2006575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2004730-2004771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1995882-1996005:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1991710-1991941:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1989683-1989845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1988788-1988920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1986816-1986870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1983149-1983241:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1980663-1980740:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1979994-1980033:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1977989-1978050:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1976860-1976925:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1973716-1973852:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1973170-1973305:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1972524-1972684:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1968126-1968312:-1:exon

LOC105942251
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105942251
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2035630..2036390)
location: region:2035630-2036390:-1
so has part: feature:2035630-2036390:-1:exon

105942251
type: Gene
SIO_000068: ncbigene

position:2035630:-1
position: 2035630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2036390:-1
position: 2036390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2035630-2036390:-1:exon

LOC105942251
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC105942251
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
pseudo: true
SIO_010081: LOC105942251
subclass of: SO_0000673
so part of: LOC105942251
location: complement(2035630..2036390)
location: region:2035630-2036390:-1
so has part: feature:2035630-2036390:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2035630-2036390:-1:exon

LOC101536119
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101536119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2088891..2089343)
location: region:2088891-2089343:-1
so has part: feature:2088891-2089343:-1:exon
subclass of: SO_0000010

101536119
type: Gene
SIO_000068: ncbigene

position:2088891:-1
position: 2088891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2089343:-1
position: 2089343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2088891-2089343:-1:exon

LOC101536119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101536119
product: high mobility group protein B3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_012929278.2
SIO_010081: LOC101536119
subclass of: SO_0000673
so part of: LOC101536119
location: complement(2088891..2089343)
location: region:2088891-2089343:-1
so has part: feature:2088891-2089343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2088891-2089343:-1:exon

LOC101536119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101536119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group protein B3-like
translation: MAKSVPKKSKGKLLVYVQTCQEEHKRKNPEIPVNFTEFSQKCSERWKPTSGKEKSKFDQMAKEAKVRYDWEMKDYAPAKEGKKKKDPHVSKRPPSGFFLFISEFCHKIKSTNPRISMGDAAKKLGEMWNNLSDGEKNLYIIKVAKLKEKY
SIO_010081: LOC101536119
subclass of: SO_0000673
so part of: LOC101536119
location: complement(2088891..2089343)
location: region:2088891-2089343:-1
so has part: feature:2088891-2089343:-1:exon

XP_012784732.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2088891-2089343:-1:exon

LOC118760208
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760208
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(2120863..2120924)
location: region:2120863-2120924:-1
so has part: feature:2120863-2120924:-1:exon

118760208
type: Gene
SIO_000068: ncbigene

position:2120863:-1
position: 2120863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2120924:-1
position: 2120924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2120863-2120924:-1:exon

LOC118760208
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118760208
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118760208
subclass of: SO_0000673
so part of: LOC118760208
location: complement(2120863..2120924)
location: region:2120863-2120924:-1
so has part: feature:2120863-2120924:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2120863-2120924:-1:exon

SHLD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SHLD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2136286..2217064
location: region:2136286-2217064:1
so has part: feature:2136286-2217064:1:exon
subclass of: SO_0000010

101536358
type: Gene
SIO_000068: ncbigene

position:2136286:1
position: 2136286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2217064:1
position: 2217064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2136286-2217064:1:exon

SHLD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SHLD1
product: shieldin complex subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_004593389.1
SIO_010081: SHLD1
subclass of: SO_0000673
so part of: SHLD1
location: join(2136286..2136466,2216622..2217064)
location: region:2136286-2217064:1
so has part: feature:2136286-2136466:1:exon
so has part: feature:2216622-2217064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2136286-2136466:1:exon

position:2136466:1
position: 2136466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2216622-2217064:1:exon

position:2216622:1
position: 2216622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHLD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SHLD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: shieldin complex subunit 1
translation: MAAQEAAAGSLSPESCVLELPSTHDIGHFVLQRPSQEPSSEALGPPVEFQSLPCSSDVDSDTCNLNTEPKDSWASENYRTYASVEGQSETEEEDGGLRKALDVFYEAFGRPQPASRNPLSVRMCQCLTQKITELGGQESQAYTLRTFQMARVILSRDGCSVLQRHSKDTCFYPLEETAASLDDEKPIPGLSADVIRFLLQQKVMKEP
SIO_010081: SHLD1
subclass of: SO_0000673
so part of: SHLD1
location: join(2136286..2136466,2216622..2217064)
location: region:2136286-2217064:1
so has part: feature:2136286-2136466:1:exon
so has part: feature:2216622-2217064:1:exon

XP_004593446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2136286-2136466:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2216622-2217064:1:exon

CHGB
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CHGB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2238560..2249645
location: region:2238560-2249645:1
so has part: feature:2238560-2249645:1:exon
subclass of: SO_0000010

101536608
type: Gene
SIO_000068: ncbigene

position:2238560:1
position: 2238560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2249645:1
position: 2249645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2238560-2249645:1:exon

CHGB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CHGB
product: chromogranin B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593390.2
SIO_010081: CHGB
subclass of: SO_0000673
so part of: CHGB
location: join(2238560..2238608,2242447..2242493,2242959..2243052,2246816..2248470,2249277..2249645)
location: region:2238560-2249645:1
so has part: feature:2238560-2238608:1:exon
so has part: feature:2242447-2242493:1:exon
so has part: feature:2242959-2243052:1:exon
so has part: feature:2246816-2248470:1:exon
so has part: feature:2249277-2249645:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2238560-2238608:1:exon

position:2238608:1
position: 2238608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2242447-2242493:1:exon

position:2242447:1
position: 2242447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2242493:1
position: 2242493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2242959-2243052:1:exon

position:2242959:1
position: 2242959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2243052:1
position: 2243052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2246816-2248470:1:exon

position:2246816:1
position: 2246816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2248470:1
position: 2248470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2249277-2249645:1:exon

position:2249277:1
position: 2249277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHGB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CHGB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretogranin-1
translation: MLRARLLSLLGAAVLAAVSAVPLDNRNHNEEMVTRCIIEVLSSALSKSNAPPVTPECRQVLKNSGKEAKDEEKSGKENSKFEVRLLRDPGAASEGQRASSRAEEDAWGPTKVENRAPGGGRGQEGTVAPGSSTRAAKEAQTRPSEKTVGTDSEEEGENNSKERHGEDATEGKHRTELGETQKALPDKRSQAAAQTVRWDGHSEEETHSREKSSRESGEEMGSREERPPEPTTQSQSQEESEESREDATVEVAKRRARPRHHHGRSRPDRAQDGTLGSQEGGQSHPEMEAAGAGTAGAGGRAVQHAAHPRASEEEPAYGAEGRSSAGVRAPAYGGRGSEEYRAVGPQSVESREEGEEPSLELDNMAHRDGEGREVERGREQGKGPRSRGQGGEPAARSSLTTRGEQGPMGEGHRRIQESQMDKASRLLPGEWSAPPERRYLSYGDEGAQGKWPWQEDLQAPEEVMLQDRFGLYPSKERRKRLGGLFNPYFDPLQWKDGRFEKKDSLDDNFLEGEEENGMALNERAFFPEYSYDWWERKPFSEDVNWGYEKRSSARAPKLNLKRQYDRVAELDRLLHYRKKAAEFPDFYDSEEQMSPRHEAERERAGEDEAVLTDQEEKELENLAAMDLELQKIAEKFSQRG
SIO_010081: CHGB
subclass of: SO_0000673
so part of: CHGB
location: join(2238560..2238608,2242447..2242493,2242959..2243052,2246816..2248470,2249277..2249354)
location: region:2238560-2249354:1
so has part: feature:2238560-2238608:1:exon
so has part: feature:2242447-2242493:1:exon
so has part: feature:2242959-2243052:1:exon
so has part: feature:2246816-2248470:1:exon
so has part: feature:2249277-2249354:1:exon

XP_004593447.1
type: Protein
SIO_000068: ncbiprotein

position:2249354:1
position: 2249354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2238560-2238608:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2242447-2242493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2242959-2243052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2246816-2248470:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2249277-2249354:1:exon

TRMT6
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TRMT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2259130..2275402)
location: region:2259130-2275402:-1
so has part: feature:2259130-2275402:-1:exon
subclass of: SO_0000010

101516045
type: Gene
SIO_000068: ncbigene

position:2259130:-1
position: 2259130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2275402:-1
position: 2275402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2259130-2275402:-1:exon

TRMT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TRMT6
product: tRNA methyltransferase 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 7 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593391.1
SIO_010081: TRMT6
subclass of: SO_0000673
so part of: TRMT6
location: complement(join(2259130..2259300,2259400..2259502,2267342..2267427,2267818..2268176,2269515..2269639,2269903..2269986,2270116..2270207,2270721..2270830,2273107..2273237,2275293..2275402))
location: region:2259130-2275402:-1
so has part: feature:2275293-2275402:-1:exon
so has part: feature:2273107-2273237:-1:exon
so has part: feature:2270721-2270830:-1:exon
so has part: feature:2270116-2270207:-1:exon
so has part: feature:2269903-2269986:-1:exon
so has part: feature:2269515-2269639:-1:exon
so has part: feature:2267818-2268176:-1:exon
so has part: feature:2267342-2267427:-1:exon
so has part: feature:2259400-2259502:-1:exon
so has part: feature:2259130-2259300:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2275293-2275402:-1:exon

position:2275293:-1
position: 2275293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2273107-2273237:-1:exon

position:2273107:-1
position: 2273107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2273237:-1
position: 2273237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2270721-2270830:-1:exon

position:2270721:-1
position: 2270721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2270830:-1
position: 2270830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2270116-2270207:-1:exon

position:2270116:-1
position: 2270116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2270207:-1
position: 2270207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2269903-2269986:-1:exon

position:2269903:-1
position: 2269903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2269986:-1
position: 2269986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2269515-2269639:-1:exon

position:2269515:-1
position: 2269515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2269639:-1
position: 2269639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2267818-2268176:-1:exon

position:2267818:-1
position: 2267818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2268176:-1
position: 2268176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2267342-2267427:-1:exon

position:2267342:-1
position: 2267342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2267427:-1
position: 2267427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2259400-2259502:-1:exon

position:2259400:-1
position: 2259400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2259502:-1
position: 2259502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2259130-2259300:-1:exon

position:2259300:-1
position: 2259300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRMT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TRMT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6
translation: MEGAGEPRPANHCIRDGDFVVLKREDVFKAVQVQRRKKVTFEKQWFYLDNVIGHSYGTTFEVTGGGSLQPKKKKEGEPTAETKEAGTDNRNIIDDGKSQKLTQDDIKALKDRGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEAVITVVRPSTRILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGAVMERMGGFGSIIQLYAGGGPVRAATTCFGFPKSFFSGLYEFPLNKVDSLLNGTFSAEMLFSEPKDSATLEESSGALGGKQAAEAESEDGLAEAPESNLLEEQETLEEVSQDPEDKETKEKDGKRDYIQEKQRRQEEQKKRRLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRPFVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVGGSPGVLQVTGPSASIHGHGSVSDQR
SIO_010081: TRMT6
subclass of: SO_0000673
so part of: TRMT6
location: complement(join(2259130..2259300,2259400..2259502,2267342..2267427,2267818..2268176,2269515..2269639,2269903..2269986,2270116..2270207,2270721..2270830,2273107..2273237,2275293..2275402))
location: region:2259130-2275402:-1
so has part: feature:2275293-2275402:-1:exon
so has part: feature:2273107-2273237:-1:exon
so has part: feature:2270721-2270830:-1:exon
so has part: feature:2270116-2270207:-1:exon
so has part: feature:2269903-2269986:-1:exon
so has part: feature:2269515-2269639:-1:exon
so has part: feature:2267818-2268176:-1:exon
so has part: feature:2267342-2267427:-1:exon
so has part: feature:2259400-2259502:-1:exon
so has part: feature:2259130-2259300:-1:exon

XP_004593448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2275293-2275402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2273107-2273237:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2270721-2270830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2270116-2270207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2269903-2269986:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2269515-2269639:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2267818-2268176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2267342-2267427:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2259400-2259502:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2259130-2259300:-1:exon

MCM8
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: MCM8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2276533..2309540
location: region:2276533-2309540:1
so has part: feature:2276533-2309540:1:exon
subclass of: SO_0000010

101522980
type: Gene
SIO_000068: ncbigene

position:2276533:1
position: 2276533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2309540:1
position: 2309540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2276533-2309540:1:exon

MCM8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MCM8
product: minichromosome maintenance 8 homologous recombination repair factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036497174.1
SIO_010081: MCM8
subclass of: SO_0000673
so part of: MCM8
location: join(2276533..2276653,2276942..2277025,2278474..2278556,2278860..2279009,2286283..2286386,2289100..2289298,2290446..2290531,2294428..2294579,2294805..2295000,2297379..2297409,2300047..2300188,2303313..2303508,2304298..2304517,2305051..2305260,2306697..2306773,2307947..2308136,2309124..2309540)
location: region:2276533-2309540:1
so has part: feature:2276533-2276653:1:exon
so has part: feature:2276942-2277025:1:exon
so has part: feature:2278474-2278556:1:exon
so has part: feature:2278860-2279009:1:exon
so has part: feature:2286283-2286386:1:exon
so has part: feature:2289100-2289298:1:exon
so has part: feature:2290446-2290531:1:exon
so has part: feature:2294428-2294579:1:exon
so has part: feature:2294805-2295000:1:exon
so has part: feature:2297379-2297409:1:exon
so has part: feature:2300047-2300188:1:exon
so has part: feature:2303313-2303508:1:exon
so has part: feature:2304298-2304517:1:exon
so has part: feature:2305051-2305260:1:exon
so has part: feature:2306697-2306773:1:exon
so has part: feature:2307947-2308136:1:exon
so has part: feature:2309124-2309540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2276533-2276653:1:exon

position:2276653:1
position: 2276653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2276942-2277025:1:exon

position:2276942:1
position: 2276942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2277025:1
position: 2277025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2278474-2278556:1:exon

position:2278474:1
position: 2278474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2278556:1
position: 2278556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2278860-2279009:1:exon

position:2278860:1
position: 2278860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2279009:1
position: 2279009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2286283-2286386:1:exon

position:2286283:1
position: 2286283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2286386:1
position: 2286386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2289100-2289298:1:exon

position:2289100:1
position: 2289100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2289298:1
position: 2289298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2290446-2290531:1:exon

position:2290446:1
position: 2290446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2290531:1
position: 2290531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2294428-2294579:1:exon

position:2294428:1
position: 2294428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2294579:1
position: 2294579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2294805-2295000:1:exon

position:2294805:1
position: 2294805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2295000:1
position: 2295000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2297379-2297409:1:exon

position:2297379:1
position: 2297379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2297409:1
position: 2297409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2300047-2300188:1:exon

position:2300047:1
position: 2300047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2300188:1
position: 2300188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2303313-2303508:1:exon

position:2303313:1
position: 2303313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2303508:1
position: 2303508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2304298-2304517:1:exon

position:2304298:1
position: 2304298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2304517:1
position: 2304517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2305051-2305260:1:exon

position:2305051:1
position: 2305051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2305260:1
position: 2305260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2306697-2306773:1:exon

position:2306697:1
position: 2306697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2306773:1
position: 2306773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2307947-2308136:1:exon

position:2307947:1
position: 2307947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308136:1
position: 2308136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2309124-2309540:1:exon

position:2309124:1
position: 2309124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCM8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MCM8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA helicase MCM8
translation: MAGEYRGRGFGRGRFHSWKRGRGGGNSSGRWRPREHRPQLKQNSASLLLQSTLEQFIPYKGWKLYFSEVYSDGSFCIEKIQAFEQFFTRRIDLYDKDEIERKGSILVDFKELIEDDKLTNLIPNVANELRDAPERTLACMGLAIHQVLTKDLERHAAELQAQEGLPQDRGTIVNVPHVHARVYNYEPLTQLKNVRANLYGKYVALRGTVVRVSNIKPLCTKMAFRCASCGKVQSFPLPDGKYSLPTKCPVPGCRGRSFAALPSSPLTVTMDWQSIKIQELMSDDQREAGRIPRTIECELVHDLVDSCVPGDTVTITGIVKVSNAEEGSRNKNDKCMFLLYIEANSISNSKGQKAETSEDGCKHGALMEFSLKELYAIQEIQAEENLFKLIVNSLCPVIFGHEAVCNVAPRGVYVCGNTTTTSGLTVTLSKDSSSGDFALEAGALVLGDQGVCGIDEFDKMGNQHQALLEAMEQQSISLAKAGVVCTLPARTSIIAAANPVGGHYNKAKTVSENLKMGSALLSRFDLVFILLDTPNEDHDHLLSEHVIAIRAGKQNTVSSATVARMNSQESNTSILEVVSEKPLAERLKVAPGEAIDPIPHQLLRKYVGYARQYVYPRLSPEAAQVLQNFYLELRKQSQRLNSSPITTRQLESLIRLTEARARLELREEATKEDAEDIVEIMKYSMLGTYSDEFGNLDFERSQHGSGMSNRSTARRFISALNSIAERTYNNLFQLCQLRQIAKELNIQVADFENFVGSLNDQGYLLKKGPKVYQLQTM
SIO_010081: MCM8
subclass of: SO_0000673
so part of: MCM8
location: join(2276533..2276653,2276942..2277025,2278474..2278556,2278860..2279009,2286283..2286386,2289100..2289298,2290446..2290531,2294428..2294579,2294805..2295000,2297379..2297409,2300047..2300188,2303313..2303508,2304298..2304517,2305051..2305260,2306697..2306773,2307947..2308136,2309124..2309216)
location: region:2276533-2309216:1
so has part: feature:2276533-2276653:1:exon
so has part: feature:2276942-2277025:1:exon
so has part: feature:2278474-2278556:1:exon
so has part: feature:2278860-2279009:1:exon
so has part: feature:2286283-2286386:1:exon
so has part: feature:2289100-2289298:1:exon
so has part: feature:2290446-2290531:1:exon
so has part: feature:2294428-2294579:1:exon
so has part: feature:2294805-2295000:1:exon
so has part: feature:2297379-2297409:1:exon
so has part: feature:2300047-2300188:1:exon
so has part: feature:2303313-2303508:1:exon
so has part: feature:2304298-2304517:1:exon
so has part: feature:2305051-2305260:1:exon
so has part: feature:2306697-2306773:1:exon
so has part: feature:2307947-2308136:1:exon
so has part: feature:2309124-2309216:1:exon

XP_036353067.1
type: Protein
SIO_000068: ncbiprotein

position:2309216:1
position: 2309216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2276533-2276653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2276942-2277025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2278474-2278556:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2278860-2279009:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2286283-2286386:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2289100-2289298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2290446-2290531:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2294428-2294579:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2294805-2295000:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2297379-2297409:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2300047-2300188:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2303313-2303508:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2304298-2304517:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2305051-2305260:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2306697-2306773:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2307947-2308136:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2309124-2309216:1:exon

CRLS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CRLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2331840..2348704
location: region:2331840-2348704:1
so has part: feature:2331840-2348704:1:exon
subclass of: SO_0000010

101516291
type: Gene
SIO_000068: ncbigene

position:2331840:1
position: 2331840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2348704:1
position: 2348704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2331840-2348704:1:exon

CRLS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CRLS1
product: cardiolipin synthase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_036497175.1
SIO_010081: CRLS1
subclass of: SO_0000673
so part of: CRLS1
location: join(2331840..2331852,2333604..2333785,2333893..2333915,2348617..2348704)
location: region:2331840-2348704:1
so has part: feature:2331840-2331852:1:exon
so has part: feature:2333604-2333785:1:exon
so has part: feature:2333893-2333915:1:exon
so has part: feature:2348617-2348704:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2331840-2331852:1:exon

position:2331852:1
position: 2331852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2333604-2333785:1:exon

position:2333604:1
position: 2333604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2333785:1
position: 2333785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2333893-2333915:1:exon

position:2333893:1
position: 2333893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2333915:1
position: 2333915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2348617-2348704:1:exon

position:2348617:1
position: 2348617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRLS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CRLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cardiolipin synthase (CMP-forming)
translation: MSSLLILWCFIYFSFYVFQYENPWTIPNMLSMTRIGLAPILGYLIIEEDFNIALGVFALAGLTDLDTVKVKAMCLTAFTTAASAYSYYHYGRKTVQVIKGR
SIO_010081: CRLS1
subclass of: SO_0000673
so part of: CRLS1
location: join(2331840..2331852,2333604..2333785,2333893..2333915,2348617..2348704)
location: region:2331840-2348704:1
so has part: feature:2331840-2331852:1:exon
so has part: feature:2333604-2333785:1:exon
so has part: feature:2333893-2333915:1:exon
so has part: feature:2348617-2348704:1:exon

XP_036353068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2331840-2331852:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2333604-2333785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2333893-2333915:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2348617-2348704:1:exon

LRRN4
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LRRN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2355780..2364675)
location: region:2355780-2364675:-1
so has part: feature:2355780-2364675:-1:exon
subclass of: SO_0000010

101516529
type: Gene
SIO_000068: ncbigene

position:2355780:-1
position: 2355780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2364675:-1
position: 2364675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2355780-2364675:-1:exon

LRRN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LRRN4
product: leucine rich repeat neuronal 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_004593393.3
SIO_010081: LRRN4
subclass of: SO_0000673
so part of: LRRN4
location: complement(join(2355780..2356596,2356687..2356941,2359983..2360120,2362963..2363167,2364012..2364675))
location: region:2355780-2364675:-1
so has part: feature:2364012-2364675:-1:exon
so has part: feature:2362963-2363167:-1:exon
so has part: feature:2359983-2360120:-1:exon
so has part: feature:2356687-2356941:-1:exon
so has part: feature:2355780-2356596:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2364012-2364675:-1:exon

position:2364012:-1
position: 2364012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2362963-2363167:-1:exon

position:2362963:-1
position: 2362963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2363167:-1
position: 2363167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2359983-2360120:-1:exon

position:2359983:-1
position: 2359983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2360120:-1
position: 2360120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2356687-2356941:-1:exon

position:2356687:-1
position: 2356687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2356941:-1
position: 2356941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2355780-2356596:-1:exon

position:2356596:-1
position: 2356596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LRRN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 4
translation: MWHALLLLLLLPPSTVLRPGRAETSQRMVPIFWFTHQGPWASASSTTTSSPCEVTPAAATTDLNLANRSLELLPSCLPHALRSLDGSHNLLRALSAPELGHLRQLQVLTLHHNDIETLRWGPGGPAALHTLDLSYNCLAALPRCAAPELPSLRSLLLSGNPLQALQPQAFACVPELRLLNLSSTALGRGAPAAFAQAAFAGAAGAPLAIEVLDLSDTFLERVESSWMQDLPNLTHLYLRRMPRLRTLEGDVFKMTPHLQHLDCQDSPALASVHTAIFEDTPQLQHLLLQNCNLTSWPPWTLNSSQVLSISLFGNPLTCSCELSWLLVDTSRTVLSRAADTMCAPAAGSSGPFSAPVSLLQLPRVCQADRNTTLAAPNAHFFGATHTASTQGPAAASTQPAAGQRSVTKASSLSGTPSSSVGSATATPLSSKPPSPVPTRPSSWVTPQPQQRTQSGARAPHPSPSEDKSPVFLTGDYSDEEEEEEGTLEEVRAPAPDVFCDYHPCRHLQTPCAELQRRSRCRCPGLSGEDVAPDPPLLQAVSETADTWALVHWCAPTSVVRTYQIRYSVEGQAGNQSVVADIPATARQHLLYGLSPATTYRVCVLAANRAGLSRLRAAARRSACTAFSTRPSAGLVLAGLGAVSGLLLLCSLVLAACLCRRCRTPGAPQPPDTHLVAYRNPVFDYPLKLQPLN
SIO_010081: LRRN4
subclass of: SO_0000673
so part of: LRRN4
location: complement(join(2355780..2356596,2356687..2356941,2359983..2360120,2362963..2363167,2364012..2364675))
location: region:2355780-2364675:-1
so has part: feature:2364012-2364675:-1:exon
so has part: feature:2362963-2363167:-1:exon
so has part: feature:2359983-2360120:-1:exon
so has part: feature:2356687-2356941:-1:exon
so has part: feature:2355780-2356596:-1:exon

XP_004593450.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2364012-2364675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2362963-2363167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2359983-2360120:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2356687-2356941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2355780-2356596:-1:exon

FERMT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: FERMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2378521..2407966)
location: region:2378521-2407966:-1
so has part: feature:2378521-2407966:-1:exon
subclass of: SO_0000010

101516774
type: Gene
SIO_000068: ncbigene

position:2378521:-1
position: 2378521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2407966:-1
position: 2407966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2378521-2407966:-1:exon

FERMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: FERMT1
product: fermitin family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_004593394.1
SIO_010081: FERMT1
subclass of: SO_0000673
so part of: FERMT1
location: complement(join(2378521..2378694,2380813..2380954,2382904..2383028,2384592..2384813,2386746..2386852,2387548..2387672,2391847..2391896,2393323..2393454,2393861..2393968,2394204..2394268,2402504..2402650,2406012..2406245,2407816..2407966))
location: region:2378521-2407966:-1
so has part: feature:2407816-2407966:-1:exon
so has part: feature:2406012-2406245:-1:exon
so has part: feature:2402504-2402650:-1:exon
so has part: feature:2394204-2394268:-1:exon
so has part: feature:2393861-2393968:-1:exon
so has part: feature:2393323-2393454:-1:exon
so has part: feature:2391847-2391896:-1:exon
so has part: feature:2387548-2387672:-1:exon
so has part: feature:2386746-2386852:-1:exon
so has part: feature:2384592-2384813:-1:exon
so has part: feature:2382904-2383028:-1:exon
so has part: feature:2380813-2380954:-1:exon
so has part: feature:2378521-2378694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2407816-2407966:-1:exon

position:2407816:-1
position: 2407816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2406012-2406245:-1:exon

position:2406012:-1
position: 2406012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2406245:-1
position: 2406245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2402504-2402650:-1:exon

position:2402504:-1
position: 2402504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2402650:-1
position: 2402650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2394204-2394268:-1:exon

position:2394204:-1
position: 2394204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2394268:-1
position: 2394268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2393861-2393968:-1:exon

position:2393861:-1
position: 2393861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393968:-1
position: 2393968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2393323-2393454:-1:exon

position:2393323:-1
position: 2393323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393454:-1
position: 2393454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2391847-2391896:-1:exon

position:2391847:-1
position: 2391847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2391896:-1
position: 2391896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2387548-2387672:-1:exon

position:2387548:-1
position: 2387548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2387672:-1
position: 2387672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2386746-2386852:-1:exon

position:2386746:-1
position: 2386746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2386852:-1
position: 2386852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2384592-2384813:-1:exon

position:2384592:-1
position: 2384592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2384813:-1
position: 2384813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2382904-2383028:-1:exon

position:2382904:-1
position: 2382904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2383028:-1
position: 2383028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2380813-2380954:-1:exon

position:2380813:-1
position: 2380813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2380954:-1
position: 2380954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2378521-2378694:-1:exon

position:2378694:-1
position: 2378694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FERMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: FERMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fermitin family homolog 1
translation: MLSSSDFASASWELVVRVDHPDKEEQEEVRLRVSGDLHVGGVMLKLVEKINLAQDWSDFALWWEQKRCWLLKTHWTLDKCGVQADARLLFTPQHKTLRLRLPNVKTVRLRVSFSAVVFRAVTDICKTLNIRRSEELSLLKPSGDYFKKKKKKDRSNKEPVIEDVLDLECSSTSSGSPDVLGEPSCFILYVAVSMVMSTPYDAVRINQLYEQARWAILLEEIDCTEEEMLIFAALQYHISKLSLSAETQDLTSECEADEVEAALSHLEVTLEGGKADNPLEDITDIPKLADNLRLFRAKKLMLKSFKQYWFVFKDTSIAYFKSKEVEQGEPIEKLNLRGCEVVPDVNVAGRKFGIKLLIPVADGMNEVYLRCDHENQYARWMAACSLASKGKTMADSSYQPEVLNILSFLRMKNRTSASPAASGPENMDMNPECFVSPRCAKKHKSKQLAARILEAHQNVAQMPLVEAKLRFIQAWQSLPEFGLTYYLVRFKGSKKDDILGVSYNRLIRIDAVTGVPITTWRFTNMKQWNVNWEIRQVAIEFDQNVSIAFTCLSADCKVVHEYIGGYIFLSTRSKDQNETLDEDLFHKLTGGQD
SIO_010081: FERMT1
subclass of: SO_0000673
so part of: FERMT1
location: complement(join(2378521..2378694,2380813..2380954,2382904..2383028,2384592..2384813,2386746..2386852,2387548..2387672,2391847..2391896,2393323..2393454,2393861..2393968,2394204..2394268,2402504..2402650,2406012..2406245,2407816..2407966))
location: region:2378521-2407966:-1
so has part: feature:2407816-2407966:-1:exon
so has part: feature:2406012-2406245:-1:exon
so has part: feature:2402504-2402650:-1:exon
so has part: feature:2394204-2394268:-1:exon
so has part: feature:2393861-2393968:-1:exon
so has part: feature:2393323-2393454:-1:exon
so has part: feature:2391847-2391896:-1:exon
so has part: feature:2387548-2387672:-1:exon
so has part: feature:2386746-2386852:-1:exon
so has part: feature:2384592-2384813:-1:exon
so has part: feature:2382904-2383028:-1:exon
so has part: feature:2380813-2380954:-1:exon
so has part: feature:2378521-2378694:-1:exon

XP_004593451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2407816-2407966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2406012-2406245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2402504-2402650:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2394204-2394268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2393861-2393968:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2393323-2393454:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2391847-2391896:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2387548-2387672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2386746-2386852:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2384592-2384813:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2382904-2383028:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2380813-2380954:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2378521-2378694:-1:exon

LOC101523223
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101523223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2557783..2558974)
location: region:2557783-2558974:-1
so has part: feature:2557783-2558974:-1:exon
subclass of: SO_0000010

101523223
type: Gene
SIO_000068: ncbigene

position:2557783:-1
position: 2557783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2558974:-1
position: 2558974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2557783-2558974:-1:exon

LOC101523223
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101523223
product: ubiquitin-conjugating enzyme E2 variant 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593346.2
SIO_010081: LOC101523223
subclass of: SO_0000673
so part of: LOC101523223
location: complement(2557783..2558974)
location: region:2557783-2558974:-1
so has part: feature:2557783-2558974:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2557783-2558974:-1:exon

LOC101523223
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101523223
product: ubiquitin-conjugating enzyme E2 variant 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593347.2
SIO_010081: LOC101523223
subclass of: SO_0000673
so part of: LOC101523223
location: complement(join(2558521..2558668,2558795..2558973))
location: region:2558521-2558973:-1
so has part: feature:2558795-2558973:-1:exon
so has part: feature:2558521-2558668:-1:exon

position:2558521:-1
position: 2558521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2558973:-1
position: 2558973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2558795-2558973:-1:exon

position:2558795:-1
position: 2558795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2558521-2558668:-1:exon

position:2558668:-1
position: 2558668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101523223
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101523223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 variant 2-like isoform X2
translation: MAVSTGVEVPRNFRLLEELEEGQKGVGEDTFSWGLEDDEYMTLTRWTGVIIGPPRVAARSIPELAKWQNSYSIKVVLQELRRPMMSKENMKLPQLPEGQTYNN
SIO_010081: LOC101523223
subclass of: SO_0000673
so part of: LOC101523223
location: complement(join(2558521..2558668,2558795..2558958))
location: region:2558521-2558958:-1
so has part: feature:2558795-2558958:-1:exon
so has part: feature:2558521-2558668:-1:exon

XP_004593404.1
type: Protein
SIO_000068: ncbiprotein

position:2558958:-1
position: 2558958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2558795-2558958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2558521-2558668:-1:exon

LOC101523223
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101523223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 variant 2-like isoform X1
translation: MAVSTGVEVPRNFRLLEELEEGQKGVGEDTFSWGLEDDEYMTLTRWTGVIIGPPRMNYENRIHSLKLECGPKSPQAPPSVRFITKINMNGINNSSGMVAARSIPELAKWQNSYSIKVVLQELRRPMMSKENMKLPQLPEGQTYNN
SIO_010081: LOC101523223
subclass of: SO_0000673
so part of: LOC101523223
location: complement(2558521..2558958)
location: region:2558521-2558958:-1
so has part: feature:2558521-2558958:-1:exon

XP_004593403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2558521-2558958:-1:exon

BMP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: BMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2941146..2949489
location: region:2941146-2949489:1
so has part: feature:2941146-2949489:1:exon
subclass of: SO_0000010

101523631
type: Gene
SIO_000068: ncbigene

position:2941146:1
position: 2941146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2949489:1
position: 2949489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2941146-2949489:1:exon

BMP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: BMP2
product: bone morphogenetic protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 18 Proteins
transcript id: XM_004593348.1
SIO_010081: BMP2
subclass of: SO_0000673
so part of: BMP2
location: join(2941146..2941507,2948610..2949489)
location: region:2941146-2949489:1
so has part: feature:2941146-2941507:1:exon
so has part: feature:2948610-2949489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2941146-2941507:1:exon

position:2941507:1
position: 2941507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2948610-2949489:1:exon

position:2948610:1
position: 2948610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BMP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: BMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bone morphogenetic protein 2
translation: MVAGTRCLLALLLPQVLLGGAAGLLPELGRRKFAAAAAAAAAAGRPSSQPSDDILSEFELRLLSMFGLKQRPTPSRDAVVPPYMLDLYRRHSGQPGAPAPDHRLERAASRANTVRSFHHEESLEDLPETSGKTTRRFFFNLTSIPPEEFITSAELQVFREQMQEALGNNNTFYHRINIYEIIKPATANSKFPTSRLLDTRLVNGNTSQWESFDVTPAVTRWTAQGQANHGFVVEVTHSEEKPGVSERHVRISRSLHPDELSWPQTRPLLVTFGHDGKGHPLHKREKRQAKHKQRKRLKSSCKRHPLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNSVNSKIPKACCVPTELSAISMLYLDENEKVVLKNYQDMVVEGCGCR
SIO_010081: BMP2
subclass of: SO_0000673
so part of: BMP2
location: join(2941147..2941507,2948610..2949454)
location: region:2941147-2949454:1
so has part: feature:2941147-2941507:1:exon
so has part: feature:2948610-2949454:1:exon

XP_004593405.1
type: Protein
SIO_000068: ncbiprotein

position:2941147:1
position: 2941147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2949454:1
position: 2949454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2941147-2941507:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2948610-2949454:1:exon

HAO1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: HAO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3733584..3784252)
location: region:3733584-3784252:-1
so has part: feature:3733584-3784252:-1:exon
subclass of: SO_0000010

101523876
type: Gene
SIO_000068: ncbigene

position:3733584:-1
position: 3733584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3784252:-1
position: 3784252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733584-3784252:-1:exon

HAO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: HAO1
product: hydroxyacid oxidase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593349.2
SIO_010081: HAO1
subclass of: SO_0000673
so part of: HAO1
location: complement(join(3733584..3734286,3736435..3736504,3736612..3736770,3743989..3744080,3751609..3751784,3760950..3761205,3775458..3775609,3782852..3782996,3784242..3784252))
location: region:3733584-3784252:-1
so has part: feature:3784242-3784252:-1:exon
so has part: feature:3782852-3782996:-1:exon
so has part: feature:3775458-3775609:-1:exon
so has part: feature:3760950-3761205:-1:exon
so has part: feature:3751609-3751784:-1:exon
so has part: feature:3743989-3744080:-1:exon
so has part: feature:3736612-3736770:-1:exon
so has part: feature:3736435-3736504:-1:exon
so has part: feature:3733584-3734286:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3784242-3784252:-1:exon

position:3784242:-1
position: 3784242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3782852-3782996:-1:exon

position:3782852:-1
position: 3782852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3782996:-1
position: 3782996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3775458-3775609:-1:exon

position:3775458:-1
position: 3775458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3775609:-1
position: 3775609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3760950-3761205:-1:exon

position:3760950:-1
position: 3760950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3761205:-1
position: 3761205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3751609-3751784:-1:exon

position:3751609:-1
position: 3751609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3751784:-1
position: 3751784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3743989-3744080:-1:exon

position:3743989:-1
position: 3743989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3744080:-1
position: 3744080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3736612-3736770:-1:exon

position:3736612:-1
position: 3736612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3736770:-1
position: 3736770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3736435-3736504:-1:exon

position:3736435:-1
position: 3736435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3736504:-1
position: 3736504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3733584-3734286:-1:exon

position:3734286:-1
position: 3734286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: HAO1
product: hydroxyacid oxidase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012929286.1
SIO_010081: HAO1
subclass of: SO_0000673
so part of: HAO1
location: complement(join(3733584..3734286,3736435..3736504,3736612..3736770,3743989..3744080,3751609..3751784,3760950..3761205,3775458..3775609,3782852..3783047))
location: region:3733584-3783047:-1
so has part: feature:3782852-3783047:-1:exon
so has part: feature:3775458-3775609:-1:exon
so has part: feature:3760950-3761205:-1:exon
so has part: feature:3751609-3751784:-1:exon
so has part: feature:3743989-3744080:-1:exon
so has part: feature:3736612-3736770:-1:exon
so has part: feature:3736435-3736504:-1:exon
so has part: feature:3733584-3734286:-1:exon

position:3783047:-1
position: 3783047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3782852-3783047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3775458-3775609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3760950-3761205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3751609-3751784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3743989-3744080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3736612-3736770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3736435-3736504:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3733584-3734286:-1:exon

HAO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: HAO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroxyacid oxidase 1 isoform X2
translation: MKMSNQLVCINDYEQHAKLVLQKSIYDYYRSGANDQETLADNVAAFSRWKLYPRMLRNAADIDLSTSVLGQRVSMPICVGATAMQCMAHEDGELATVRACQSMGTGMMLSSWATSSIEEVAEAGPAALRWMQLYIYKDREVTKQLVRRAERMGYKAIFVTVDTPYLGNRFDDVRNRFKLPPQLRLKNFETSDLAFSPKENFGETSGLAAYVAKAIDPSISWEDIKWLRKLTSLPIVAKGILRGDDAREAVKHGLDGILVSNHGARQLDGVPATIDALPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLAFQGEKGVHDVLEILREEFRLAMALSGCQNVQVIDKTLVRKNPLAVSKI
SIO_010081: HAO1
subclass of: SO_0000673
so part of: HAO1
location: complement(join(3734216..3734286,3736435..3736504,3736612..3736770,3743989..3744080,3751609..3751784,3760950..3761205,3775458..3775609,3782852..3782994))
location: region:3734216-3782994:-1
so has part: feature:3782852-3782994:-1:exon
so has part: feature:3775458-3775609:-1:exon
so has part: feature:3760950-3761205:-1:exon
so has part: feature:3751609-3751784:-1:exon
so has part: feature:3743989-3744080:-1:exon
so has part: feature:3736612-3736770:-1:exon
so has part: feature:3736435-3736504:-1:exon
so has part: feature:3734216-3734286:-1:exon

XP_004593406.1
type: Protein
SIO_000068: ncbiprotein

position:3734216:-1
position: 3734216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3782994:-1
position: 3782994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3782852-3782994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3775458-3775609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3760950-3761205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3751609-3751784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3743989-3744080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3736612-3736770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3736435-3736504:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3734216-3734286:-1:exon

HAO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: HAO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroxyacid oxidase 1 isoform X2
translation: MKMSNQLVCINDYEQHAKLVLQKSIYDYYRSGANDQETLADNVAAFSRWKLYPRMLRNAADIDLSTSVLGQRVSMPICVGATAMQCMAHEDGELATVRACQSMGTGMMLSSWATSSIEEVAEAGPAALRWMQLYIYKDREVTKQLVRRAERMGYKAIFVTVDTPYLGNRFDDVRNRFKLPPQLRLKNFETSDLAFSPKENFGETSGLAAYVAKAIDPSISWEDIKWLRKLTSLPIVAKGILRGDDAREAVKHGLDGILVSNHGARQLDGVPATIDALPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLAFQGEKGVHDVLEILREEFRLAMALSGCQNVQVIDKTLVRKNPLAVSKI
SIO_010081: HAO1
subclass of: SO_0000673
so part of: HAO1
location: complement(join(3734216..3734286,3736435..3736504,3736612..3736770,3743989..3744080,3751609..3751784,3760950..3761205,3775458..3775609,3782852..3782994))
location: region:3734216-3782994:-1
so has part: feature:3782852-3782994:-1:exon
so has part: feature:3775458-3775609:-1:exon
so has part: feature:3760950-3761205:-1:exon
so has part: feature:3751609-3751784:-1:exon
so has part: feature:3743989-3744080:-1:exon
so has part: feature:3736612-3736770:-1:exon
so has part: feature:3736435-3736504:-1:exon
so has part: feature:3734216-3734286:-1:exon

XP_012784740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3782852-3782994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3775458-3775609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3760950-3761205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3751609-3751784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3743989-3744080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3736612-3736770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3736435-3736504:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3734216-3734286:-1:exon

HAO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: HAO1
product: hydroxyacid oxidase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012929285.1
SIO_010081: HAO1
subclass of: SO_0000673
so part of: HAO1
location: complement(join(3734391..3734621,3736435..3736504,3736612..3736770,3743989..3744080,3751609..3751784,3760950..3761205,3775458..3775609,3782852..3783047))
location: region:3734391-3783047:-1
so has part: feature:3782852-3783047:-1:exon
so has part: feature:3775458-3775609:-1:exon
so has part: feature:3760950-3761205:-1:exon
so has part: feature:3751609-3751784:-1:exon
so has part: feature:3743989-3744080:-1:exon
so has part: feature:3736612-3736770:-1:exon
so has part: feature:3736435-3736504:-1:exon
so has part: feature:3734391-3734621:-1:exon

position:3734391:-1
position: 3734391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3782852-3783047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3775458-3775609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3760950-3761205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3751609-3751784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3743989-3744080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3736612-3736770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3736435-3736504:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3734391-3734621:-1:exon

position:3734621:-1
position: 3734621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: HAO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroxyacid oxidase 1 isoform X1
translation: MKMSNQLVCINDYEQHAKLVLQKSIYDYYRSGANDQETLADNVAAFSRWKLYPRMLRNAADIDLSTSVLGQRVSMPICVGATAMQCMAHEDGELATVRACQSMGTGMMLSSWATSSIEEVAEAGPAALRWMQLYIYKDREVTKQLVRRAERMGYKAIFVTVDTPYLGNRFDDVRNRFKLPPQLRLKNFETSDLAFSPKENFGETSGLAAYVAKAIDPSISWEDIKWLRKLTSLPIVAKGILRGDDAREAVKHGLDGILVSNHGARQLDGVPATIDALPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLAFQGEKGVHDVLEILREEFRLAMALSGRASWRRMPFCESSLCILIGYRHILKESFQSLAHY
SIO_010081: HAO1
subclass of: SO_0000673
so part of: HAO1
location: complement(join(3734515..3734621,3736435..3736504,3736612..3736770,3743989..3744080,3751609..3751784,3760950..3761205,3775458..3775609,3782852..3782994))
location: region:3734515-3782994:-1
so has part: feature:3782852-3782994:-1:exon
so has part: feature:3775458-3775609:-1:exon
so has part: feature:3760950-3761205:-1:exon
so has part: feature:3751609-3751784:-1:exon
so has part: feature:3743989-3744080:-1:exon
so has part: feature:3736612-3736770:-1:exon
so has part: feature:3736435-3736504:-1:exon
so has part: feature:3734515-3734621:-1:exon

XP_012784739.1
type: Protein
SIO_000068: ncbiprotein

position:3734515:-1
position: 3734515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3782852-3782994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3775458-3775609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3760950-3761205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3751609-3751784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3743989-3744080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3736612-3736770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3736435-3736504:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3734515-3734621:-1:exon

LOC101524118
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101524118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3785907..3786096
location: region:3785907-3786096:1
so has part: feature:3785907-3786096:1:exon

101524118
type: Gene
SIO_000068: ncbigene

position:3785907:1
position: 3785907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3786096:1
position: 3786096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3785907-3786096:1:exon

LOC101524118
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101524118
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC101524118
subclass of: SO_0000673
so part of: LOC101524118
location: 3785907..3786096
location: region:3785907-3786096:1
so has part: feature:3785907-3786096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3785907-3786096:1:exon

TMX4
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TMX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3803351..3885870)
location: region:3803351-3885870:-1
so has part: feature:3803351-3885870:-1:exon
subclass of: SO_0000010

101517016
type: Gene
SIO_000068: ncbigene

position:3803351:-1
position: 3803351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3885870:-1
position: 3885870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3803351-3885870:-1:exon

TMX4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TMX4
product: thioredoxin related transmembrane protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593395.1
SIO_010081: TMX4
subclass of: SO_0000673
so part of: TMX4
location: complement(join(3803351..3803434,3810261..3810362,3819654..3819699,3821857..3821985,3823493..3823538,3827787..3827902,3885626..3885628,3885764..3885870))
location: region:3803351-3885870:-1
so has part: feature:3885764-3885870:-1:exon
so has part: feature:3885626-3885628:-1:exon
so has part: feature:3827787-3827902:-1:exon
so has part: feature:3823493-3823538:-1:exon
so has part: feature:3821857-3821985:-1:exon
so has part: feature:3819654-3819699:-1:exon
so has part: feature:3810261-3810362:-1:exon
so has part: feature:3803351-3803434:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3885764-3885870:-1:exon

position:3885764:-1
position: 3885764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3885626-3885628:-1:exon

position:3885626:-1
position: 3885626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3885628:-1
position: 3885628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3827787-3827902:-1:exon

position:3827787:-1
position: 3827787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3827902:-1
position: 3827902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3823493-3823538:-1:exon

position:3823493:-1
position: 3823493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3823538:-1
position: 3823538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3821857-3821985:-1:exon

position:3821857:-1
position: 3821857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3821985:-1
position: 3821985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3819654-3819699:-1:exon

position:3819654:-1
position: 3819654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3819699:-1
position: 3819699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3810261-3810362:-1:exon

position:3810261:-1
position: 3810261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3810362:-1
position: 3810362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3803351-3803434:-1:exon

position:3803434:-1
position: 3803434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMX4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TMX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-related transmembrane protein 4
translation: MSFLRYSPGSPLDCHSSQLKPATLPKDHAETIAPVRRYAPWCPSCQQTDSEWETFAKNGEVLQISVGKVDVIQEPGLSGRFFVTTLPAFFHAKDGIFRRYRGPGIFEDLQNYILEKKWQAVEPLTGWKSPASLTMSGMAGLFSISGKIWHLHNYFTVTLGIPAWCSYLFFIIATLAFGLLMGLLTIFSPSAVRLTQLLPVAVPSTVVTLV
SIO_010081: TMX4
subclass of: SO_0000673
so part of: TMX4
location: complement(join(3803351..3803434,3810261..3810362,3819654..3819699,3821857..3821985,3823493..3823538,3827787..3827902,3885626..3885628,3885764..3885870))
location: region:3803351-3885870:-1
so has part: feature:3885764-3885870:-1:exon
so has part: feature:3885626-3885628:-1:exon
so has part: feature:3827787-3827902:-1:exon
so has part: feature:3823493-3823538:-1:exon
so has part: feature:3821857-3821985:-1:exon
so has part: feature:3819654-3819699:-1:exon
so has part: feature:3810261-3810362:-1:exon
so has part: feature:3803351-3803434:-1:exon

XP_004593452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3885764-3885870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3885626-3885628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3827787-3827902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3823493-3823538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3821857-3821985:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3819654-3819699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3810261-3810362:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3803351-3803434:-1:exon

LOC101517261
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101517261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3906104..3906595
location: region:3906104-3906595:1
so has part: feature:3906104-3906595:1:exon

101517261
type: Gene
SIO_000068: ncbigene

position:3906104:1
position: 3906104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3906595:1
position: 3906595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3906104-3906595:1:exon

LOC101517261
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101517261
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC101517261
subclass of: SO_0000673
so part of: LOC101517261
location: 3906104..3906595
location: region:3906104-3906595:1
so has part: feature:3906104-3906595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3906104-3906595:1:exon

PLCB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PLCB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3935221..4568679
location: region:3935221-4568679:1
so has part: feature:3935221-4568679:1:exon
subclass of: SO_0000010

101524349
type: Gene
SIO_000068: ncbigene

position:3935221:1
position: 3935221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4568679:1
position: 4568679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935221-4568679:1:exon

PLCB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PLCB1
product: phospholipase C beta 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 9 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593351.1
SIO_010081: PLCB1
subclass of: SO_0000673
so part of: PLCB1
location: join(3935221..3935370,3950921..3950998,4164256..4164324,4362050..4362187,4385141..4385220,4387463..4387516,4388817..4388892,4395402..4395502,4397378..4397544,4418980..4419126,4430723..4430880,4442981..4443063,4449136..4449220,4450453..4450630,4454648..4454715,4456888..4456984,4458493..4458577,4461244..4461368,4462885..4463039,4465439..4465603,4467287..4467386,4467777..4467881,4469178..4469287,4479286..4479418,4481334..4481387,4484861..4485080,4495486..4495666,4503304..4503380,4503487..4503576,4503997..4504054,4504984..4505070,4515526..4515643,4568313..4568679)
location: region:3935221-4568679:1
so has part: feature:3935221-3935370:1:exon
so has part: feature:3950921-3950998:1:exon
so has part: feature:4164256-4164324:1:exon
so has part: feature:4362050-4362187:1:exon
so has part: feature:4385141-4385220:1:exon
so has part: feature:4387463-4387516:1:exon
so has part: feature:4388817-4388892:1:exon
so has part: feature:4395402-4395502:1:exon
so has part: feature:4397378-4397544:1:exon
so has part: feature:4418980-4419126:1:exon
so has part: feature:4430723-4430880:1:exon
so has part: feature:4442981-4443063:1:exon
so has part: feature:4449136-4449220:1:exon
so has part: feature:4450453-4450630:1:exon
so has part: feature:4454648-4454715:1:exon
so has part: feature:4456888-4456984:1:exon
so has part: feature:4458493-4458577:1:exon
so has part: feature:4461244-4461368:1:exon
so has part: feature:4462885-4463039:1:exon
so has part: feature:4465439-4465603:1:exon
so has part: feature:4467287-4467386:1:exon
so has part: feature:4467777-4467881:1:exon
so has part: feature:4469178-4469287:1:exon
so has part: feature:4479286-4479418:1:exon
so has part: feature:4481334-4481387:1:exon
so has part: feature:4484861-4485080:1:exon
so has part: feature:4495486-4495666:1:exon
so has part: feature:4503304-4503380:1:exon
so has part: feature:4503487-4503576:1:exon
so has part: feature:4503997-4504054:1:exon
so has part: feature:4504984-4505070:1:exon
so has part: feature:4515526-4515643:1:exon
so has part: feature:4568313-4568679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3935221-3935370:1:exon

position:3935370:1
position: 3935370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3950921-3950998:1:exon

position:3950921:1
position: 3950921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3950998:1
position: 3950998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4164256-4164324:1:exon

position:4164256:1
position: 4164256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4164324:1
position: 4164324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4362050-4362187:1:exon

position:4362050:1
position: 4362050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4362187:1
position: 4362187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4385141-4385220:1:exon

position:4385141:1
position: 4385141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4385220:1
position: 4385220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4387463-4387516:1:exon

position:4387463:1
position: 4387463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4387516:1
position: 4387516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4388817-4388892:1:exon

position:4388817:1
position: 4388817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4388892:1
position: 4388892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4395402-4395502:1:exon

position:4395402:1
position: 4395402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4395502:1
position: 4395502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4397378-4397544:1:exon

position:4397378:1
position: 4397378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4397544:1
position: 4397544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4418980-4419126:1:exon

position:4418980:1
position: 4418980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4419126:1
position: 4419126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4430723-4430880:1:exon

position:4430723:1
position: 4430723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4430880:1
position: 4430880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4442981-4443063:1:exon

position:4442981:1
position: 4442981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4443063:1
position: 4443063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4449136-4449220:1:exon

position:4449136:1
position: 4449136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4449220:1
position: 4449220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4450453-4450630:1:exon

position:4450453:1
position: 4450453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4450630:1
position: 4450630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4454648-4454715:1:exon

position:4454648:1
position: 4454648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4454715:1
position: 4454715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4456888-4456984:1:exon

position:4456888:1
position: 4456888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4456984:1
position: 4456984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4458493-4458577:1:exon

position:4458493:1
position: 4458493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4458577:1
position: 4458577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4461244-4461368:1:exon

position:4461244:1
position: 4461244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4461368:1
position: 4461368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4462885-4463039:1:exon

position:4462885:1
position: 4462885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4463039:1
position: 4463039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4465439-4465603:1:exon

position:4465439:1
position: 4465439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4465603:1
position: 4465603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4467287-4467386:1:exon

position:4467287:1
position: 4467287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4467386:1
position: 4467386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4467777-4467881:1:exon

position:4467777:1
position: 4467777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4467881:1
position: 4467881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4469178-4469287:1:exon

position:4469178:1
position: 4469178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4469287:1
position: 4469287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4479286-4479418:1:exon

position:4479286:1
position: 4479286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4479418:1
position: 4479418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4481334-4481387:1:exon

position:4481334:1
position: 4481334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4481387:1
position: 4481387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4484861-4485080:1:exon

position:4484861:1
position: 4484861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4485080:1
position: 4485080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4495486-4495666:1:exon

position:4495486:1
position: 4495486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4495666:1
position: 4495666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4503304-4503380:1:exon

position:4503304:1
position: 4503304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4503380:1
position: 4503380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4503487-4503576:1:exon

position:4503487:1
position: 4503487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4503576:1
position: 4503576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4503997-4504054:1:exon

position:4503997:1
position: 4503997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4504054:1
position: 4504054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:4504984-4505070:1:exon

position:4504984:1
position: 4504984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4505070:1
position: 4505070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:4515526-4515643:1:exon

position:4515526:1
position: 4515526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4515643:1
position: 4515643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:4568313-4568679:1:exon

position:4568313:1
position: 4568313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLCB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PLCB1
product: phospholipase C beta 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 13 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593350.1
SIO_010081: PLCB1
subclass of: SO_0000673
so part of: PLCB1
location: join(3935269..3935370,3950921..3950998,4164256..4164324,4362050..4362187,4385141..4385220,4387463..4387516,4388817..4388892,4395402..4395502,4397378..4397544,4418980..4419126,4430723..4430880,4442981..4443063,4449136..4449220,4450453..4450630,4454648..4454715,4456888..4456984,4458493..4458577,4461244..4461368,4462885..4463039,4465439..4465603,4467287..4467386,4467777..4467881,4469178..4469287,4479286..4479418,4481334..4481387,4484861..4485080,4495486..4495666,4503304..4503380,4503487..4503576,4503997..4504054,4504984..4505070,4568313..4568679)
location: region:3935269-4568679:1
so has part: feature:3935269-3935370:1:exon
so has part: feature:3950921-3950998:1:exon
so has part: feature:4164256-4164324:1:exon
so has part: feature:4362050-4362187:1:exon
so has part: feature:4385141-4385220:1:exon
so has part: feature:4387463-4387516:1:exon
so has part: feature:4388817-4388892:1:exon
so has part: feature:4395402-4395502:1:exon
so has part: feature:4397378-4397544:1:exon
so has part: feature:4418980-4419126:1:exon
so has part: feature:4430723-4430880:1:exon
so has part: feature:4442981-4443063:1:exon
so has part: feature:4449136-4449220:1:exon
so has part: feature:4450453-4450630:1:exon
so has part: feature:4454648-4454715:1:exon
so has part: feature:4456888-4456984:1:exon
so has part: feature:4458493-4458577:1:exon
so has part: feature:4461244-4461368:1:exon
so has part: feature:4462885-4463039:1:exon
so has part: feature:4465439-4465603:1:exon
so has part: feature:4467287-4467386:1:exon
so has part: feature:4467777-4467881:1:exon
so has part: feature:4469178-4469287:1:exon
so has part: feature:4479286-4479418:1:exon
so has part: feature:4481334-4481387:1:exon
so has part: feature:4484861-4485080:1:exon
so has part: feature:4495486-4495666:1:exon
so has part: feature:4503304-4503380:1:exon
so has part: feature:4503487-4503576:1:exon
so has part: feature:4503997-4504054:1:exon
so has part: feature:4504984-4505070:1:exon
so has part: feature:4568313-4568679:1:exon

position:3935269:1
position: 3935269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935269-3935370:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3950921-3950998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4164256-4164324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4362050-4362187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4385141-4385220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4387463-4387516:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4388817-4388892:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4395402-4395502:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4397378-4397544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4418980-4419126:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4430723-4430880:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4442981-4443063:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4449136-4449220:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4450453-4450630:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4454648-4454715:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4456888-4456984:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4458493-4458577:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4461244-4461368:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4462885-4463039:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4465439-4465603:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4467287-4467386:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4467777-4467881:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4469178-4469287:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4479286-4479418:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4481334-4481387:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4484861-4485080:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4495486-4495666:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4503304-4503380:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4503487-4503576:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4503997-4504054:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4504984-4505070:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4568313-4568679:1:exon

PLCB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PLCB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X1
translation: MAGAQPGVHALQLKPVCVSESLKKGIKFVKWDDDSTIVTPIILRTDPQGFFFYWTDQNKETELLDLSLVKDARCGKHAKAPKDPKLRELLDVGNIGRLEHRMITVVYGPDLVNISHLNLVAFQEEVAKEWTNEVFSLATNLLAQNMSRDAFLEKAYTKLKLQVTPEGRIPLKNIYRLFSADRKRVETALEACSLPSSRNDSIPQEDFTPEVYRVFLNNLCPRPEIDNIFSEFGAKSKPYLTVDQMMDFINLKQRDPRLNEILYPPLKQEQVQVLIEKYEPNSSLAKKGQISVDGFMRYLSGEENGVVSPEKLDLNEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKKSHKSSEGSGKKKLSEQASNTYSDSSSVFEPSSPGAGEADTESDDDDDDDDCKKSSMDEGTAGSEAMATEEMSNLVNYIQPVKFESFEISKKRNKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLAMQINMGMYEYNGKSGYRLKPEFMRRPDKHFDPFTEGIVDGIVANTLSVKIISGQFLSDKKVGTYVEVDMFGLPVDTRRKAFKTKTSQGNAVNPVWEEEPIVFKKVVLPSMACLRIAVYEEGGKFIGHRILPVQAIRPGYHYICLRNERNQPLMLPAVFVYIEVKDYVPDTYADVIEALSNPIRYVNLMEQRAKQLAALTLEDEEEVKKEADPGETLSEAPSEAKTTPAENGVNHTSSLAPKPTSQVLHSQPAPGSVKAPAKTEDLIQSVLTEVEAQTIEELKQQKPFVKLQKKHYKEMKDLVKRHHKKTTDLIKEHTTKYNEIQNDYLRRRAALEKTAKKDSKKRLEPSSPDHGSSAIEQDLAALDAEMNQKLIDLKDRQQQQLLNLRQEQYYSEKYQKREHIKLLMQKLTDVAEECQNNQLKKLKEICEKEKKELKKKMDKKRQEKITEAKCKDRSQMEEEKTEMIRSYIQEVVQYIKRLEEAQSKRQEKLVEKHKEIRQQILDEKPKLQTELEQEYQDKFKRLPLEILEFVQEAMKGKFSEDSSHGSVPPSVASDPGKVNHKPPPSEETEGDNPGKEFDTPL
SIO_010081: PLCB1
subclass of: SO_0000673
so part of: PLCB1
location: join(3935272..3935370,3950921..3950998,4164256..4164324,4362050..4362187,4385141..4385220,4387463..4387516,4388817..4388892,4395402..4395502,4397378..4397544,4418980..4419126,4430723..4430880,4442981..4443063,4449136..4449220,4450453..4450630,4454648..4454715,4456888..4456984,4458493..4458577,4461244..4461368,4462885..4463039,4465439..4465603,4467287..4467386,4467777..4467881,4469178..4469287,4479286..4479418,4481334..4481387,4484861..4485080,4495486..4495666,4503304..4503380,4503487..4503576,4503997..4504054,4504984..4505070,4568313..4568540)
location: region:3935272-4568540:1
so has part: feature:3935272-3935370:1:exon
so has part: feature:3950921-3950998:1:exon
so has part: feature:4164256-4164324:1:exon
so has part: feature:4362050-4362187:1:exon
so has part: feature:4385141-4385220:1:exon
so has part: feature:4387463-4387516:1:exon
so has part: feature:4388817-4388892:1:exon
so has part: feature:4395402-4395502:1:exon
so has part: feature:4397378-4397544:1:exon
so has part: feature:4418980-4419126:1:exon
so has part: feature:4430723-4430880:1:exon
so has part: feature:4442981-4443063:1:exon
so has part: feature:4449136-4449220:1:exon
so has part: feature:4450453-4450630:1:exon
so has part: feature:4454648-4454715:1:exon
so has part: feature:4456888-4456984:1:exon
so has part: feature:4458493-4458577:1:exon
so has part: feature:4461244-4461368:1:exon
so has part: feature:4462885-4463039:1:exon
so has part: feature:4465439-4465603:1:exon
so has part: feature:4467287-4467386:1:exon
so has part: feature:4467777-4467881:1:exon
so has part: feature:4469178-4469287:1:exon
so has part: feature:4479286-4479418:1:exon
so has part: feature:4481334-4481387:1:exon
so has part: feature:4484861-4485080:1:exon
so has part: feature:4495486-4495666:1:exon
so has part: feature:4503304-4503380:1:exon
so has part: feature:4503487-4503576:1:exon
so has part: feature:4503997-4504054:1:exon
so has part: feature:4504984-4505070:1:exon
so has part: feature:4568313-4568540:1:exon

XP_004593407.1
type: Protein
SIO_000068: ncbiprotein

position:3935272:1
position: 3935272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4568540:1
position: 4568540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935272-3935370:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3950921-3950998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4164256-4164324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4362050-4362187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4385141-4385220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4387463-4387516:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4388817-4388892:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4395402-4395502:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4397378-4397544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4418980-4419126:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4430723-4430880:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4442981-4443063:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4449136-4449220:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4450453-4450630:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4454648-4454715:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4456888-4456984:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4458493-4458577:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4461244-4461368:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4462885-4463039:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4465439-4465603:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4467287-4467386:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4467777-4467881:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4469178-4469287:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4479286-4479418:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4481334-4481387:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4484861-4485080:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4495486-4495666:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4503304-4503380:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4503487-4503576:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4503997-4504054:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4504984-4505070:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4568313-4568540:1:exon

PLCB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PLCB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X2
translation: MAGAQPGVHALQLKPVCVSESLKKGIKFVKWDDDSTIVTPIILRTDPQGFFFYWTDQNKETELLDLSLVKDARCGKHAKAPKDPKLRELLDVGNIGRLEHRMITVVYGPDLVNISHLNLVAFQEEVAKEWTNEVFSLATNLLAQNMSRDAFLEKAYTKLKLQVTPEGRIPLKNIYRLFSADRKRVETALEACSLPSSRNDSIPQEDFTPEVYRVFLNNLCPRPEIDNIFSEFGAKSKPYLTVDQMMDFINLKQRDPRLNEILYPPLKQEQVQVLIEKYEPNSSLAKKGQISVDGFMRYLSGEENGVVSPEKLDLNEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKKSHKSSEGSGKKKLSEQASNTYSDSSSVFEPSSPGAGEADTESDDDDDDDDCKKSSMDEGTAGSEAMATEEMSNLVNYIQPVKFESFEISKKRNKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLAMQINMGMYEYNGKSGYRLKPEFMRRPDKHFDPFTEGIVDGIVANTLSVKIISGQFLSDKKVGTYVEVDMFGLPVDTRRKAFKTKTSQGNAVNPVWEEEPIVFKKVVLPSMACLRIAVYEEGGKFIGHRILPVQAIRPGYHYICLRNERNQPLMLPAVFVYIEVKDYVPDTYADVIEALSNPIRYVNLMEQRAKQLAALTLEDEEEVKKEADPGETLSEAPSEAKTTPAENGVNHTSSLAPKPTSQVLHSQPAPGSVKAPAKTEDLIQSVLTEVEAQTIEELKQQKPFVKLQKKHYKEMKDLVKRHHKKTTDLIKEHTTKYNEIQNDYLRRRAALEKTAKKDSKKRLEPSSPDHGSSAIEQDLAALDAEMNQKLIDLKDRQQQQLLNLRQEQYYSEKYQKREHIKLLMQKLTDVAEECQNNQLKKLKEICEKEKKELKKKMDKKRQEKITEAKCKDRSQMEEEKTEMIRSYIQEVVQYIKRLEEAQSKRQEKLVEKHKEIRQQILDEKPKGDDSSSFLSESCHEDPSGPPNFTPPNPQALQW
SIO_010081: PLCB1
subclass of: SO_0000673
so part of: PLCB1
location: join(3935272..3935370,3950921..3950998,4164256..4164324,4362050..4362187,4385141..4385220,4387463..4387516,4388817..4388892,4395402..4395502,4397378..4397544,4418980..4419126,4430723..4430880,4442981..4443063,4449136..4449220,4450453..4450630,4454648..4454715,4456888..4456984,4458493..4458577,4461244..4461368,4462885..4463039,4465439..4465603,4467287..4467386,4467777..4467881,4469178..4469287,4479286..4479418,4481334..4481387,4484861..4485080,4495486..4495666,4503304..4503380,4503487..4503576,4503997..4504054,4504984..4505070,4515526..4515624)
location: region:3935272-4515624:1
so has part: feature:3935272-3935370:1:exon
so has part: feature:3950921-3950998:1:exon
so has part: feature:4164256-4164324:1:exon
so has part: feature:4362050-4362187:1:exon
so has part: feature:4385141-4385220:1:exon
so has part: feature:4387463-4387516:1:exon
so has part: feature:4388817-4388892:1:exon
so has part: feature:4395402-4395502:1:exon
so has part: feature:4397378-4397544:1:exon
so has part: feature:4418980-4419126:1:exon
so has part: feature:4430723-4430880:1:exon
so has part: feature:4442981-4443063:1:exon
so has part: feature:4449136-4449220:1:exon
so has part: feature:4450453-4450630:1:exon
so has part: feature:4454648-4454715:1:exon
so has part: feature:4456888-4456984:1:exon
so has part: feature:4458493-4458577:1:exon
so has part: feature:4461244-4461368:1:exon
so has part: feature:4462885-4463039:1:exon
so has part: feature:4465439-4465603:1:exon
so has part: feature:4467287-4467386:1:exon
so has part: feature:4467777-4467881:1:exon
so has part: feature:4469178-4469287:1:exon
so has part: feature:4479286-4479418:1:exon
so has part: feature:4481334-4481387:1:exon
so has part: feature:4484861-4485080:1:exon
so has part: feature:4495486-4495666:1:exon
so has part: feature:4503304-4503380:1:exon
so has part: feature:4503487-4503576:1:exon
so has part: feature:4503997-4504054:1:exon
so has part: feature:4504984-4505070:1:exon
so has part: feature:4515526-4515624:1:exon

XP_004593408.1
type: Protein
SIO_000068: ncbiprotein

position:4515624:1
position: 4515624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935272-3935370:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3950921-3950998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4164256-4164324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4362050-4362187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4385141-4385220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4387463-4387516:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4388817-4388892:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4395402-4395502:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4397378-4397544:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4418980-4419126:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4430723-4430880:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4442981-4443063:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4449136-4449220:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4450453-4450630:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4454648-4454715:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4456888-4456984:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4458493-4458577:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4461244-4461368:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4462885-4463039:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4465439-4465603:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4467287-4467386:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4467777-4467881:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4469178-4469287:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4479286-4479418:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4481334-4481387:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4484861-4485080:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4495486-4495666:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4503304-4503380:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4503487-4503576:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4503997-4504054:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4504984-4505070:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4515526-4515624:1:exon

LOC118760202
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760202
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 4312527..4312664
location: region:4312527-4312664:1
so has part: feature:4312527-4312664:1:exon

118760202
type: Gene
SIO_000068: ncbigene

position:4312527:1
position: 4312527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4312664:1
position: 4312664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4312527-4312664:1:exon

LOC118760202
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118760202
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118760202
subclass of: SO_0000673
so part of: LOC118760202
location: 4312527..4312664
location: region:4312527-4312664:1
so has part: feature:4312527-4312664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4312527-4312664:1:exon

LOC118760219
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760219
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4747534..4747640)
location: region:4747534-4747640:-1
so has part: feature:4747534-4747640:-1:exon
subclass of: SO_0000623

118760219
type: Gene
SIO_000068: ncbigene

position:4747534:-1
position: 4747534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4747640:-1
position: 4747640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4747534-4747640:-1:exon

LOC118760219
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118760219
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996655.1
SIO_010081: LOC118760219
subclass of: SO_0000673
so part of: LOC118760219
location: complement(4747534..4747640)
location: region:4747534-4747640:-1
so has part: feature:4747534-4747640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4747534-4747640:-1:exon

LOC101517508
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101517508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4773200..4773676)
location: region:4773200-4773676:-1
so has part: feature:4773200-4773676:-1:exon
subclass of: SO_0000010

101517508
type: Gene
SIO_000068: ncbigene

position:4773200:-1
position: 4773200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4773676:-1
position: 4773676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4773200-4773676:-1:exon

LOC101517508
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101517508
product: myosin regulatory light chain 2, smooth muscle minor isoform-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_036497115.1
SIO_010081: LOC101517508
subclass of: SO_0000673
so part of: LOC101517508
location: complement(join(4773200..4773361,4773524..4773676))
location: region:4773200-4773676:-1
so has part: feature:4773524-4773676:-1:exon
so has part: feature:4773200-4773361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4773524-4773676:-1:exon

position:4773524:-1
position: 4773524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4773200-4773361:-1:exon

position:4773361:-1
position: 4773361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101517508
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101517508
product: myosin regulatory light chain 2, smooth muscle minor isoform-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 Proteins
transcript id: XM_036497114.1
SIO_010081: LOC101517508
subclass of: SO_0000673
so part of: LOC101517508
location: complement(4773200..4773676)
location: region:4773200-4773676:-1
so has part: feature:4773200-4773676:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4773200-4773676:-1:exon

LOC101517508
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101517508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light chain 2, smooth muscle minor isoform-like isoform X2
translation: MKPTEKGPWCATSKVSATCVQAQIQEFKEVFSMTDQNRDSYTDKEDLRDRLEATGFIQEDHLQELLTTMGDHFKDKLVDKLYREAPVNKKRTCNYIKFTCILKH
SIO_010081: LOC101517508
subclass of: SO_0000673
so part of: LOC101517508
location: complement(join(4773200..4773361,4773524..4773676))
location: region:4773200-4773676:-1
so has part: feature:4773524-4773676:-1:exon
so has part: feature:4773200-4773361:-1:exon

XP_036353008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4773524-4773676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4773200-4773361:-1:exon

LOC101517508
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101517508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light chain 2, smooth muscle minor isoform-like isoform X1
translation: MKPTEKGPWCATSKVSATCVQAQIQEFKEVFSMTDQNRDSYTDKEDLRDRLASLGRNLTDAYLGAVKNQAPGPITLTMFLTMSGEKLDSTDPEVVIQNAFACSDEEATGFIQEDHLQELLTTMGDHFKDKLVDKLYREAPVNKKRTCNYIKFTCILKH
SIO_010081: LOC101517508
subclass of: SO_0000673
so part of: LOC101517508
location: complement(4773200..4773676)
location: region:4773200-4773676:-1
so has part: feature:4773200-4773676:-1:exon

XP_036353007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4773200-4773676:-1:exon

PLCB4
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PLCB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4863877..5076167
location: region:4863877-5076167:1
so has part: feature:4863877-5076167:1:exon
subclass of: SO_0000010

101524739
type: Gene
SIO_000068: ncbigene

position:4863877:1
position: 4863877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5076167:1
position: 5076167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4863877-5076167:1:exon

PLCB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PLCB4
product: phospholipase C beta 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 4 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593352.3
SIO_010081: PLCB4
subclass of: SO_0000673
so part of: PLCB4
location: join(4863877..4863936,4935347..4935445,4963633..4963713,4964485..4964544,4966063..4966206,4983931..4984010,4986740..4986793,4991525..4991606,4992339..4992439,4993082..4993139,5001185..5001293,5005933..5006143,5007414..5007507,5010267..5010346,5011102..5011186,5013746..5013836,5016142..5016237,5018211..5018305,5022030..5022171,5022937..5023021,5023352..5023476,5025264..5025315,5027208..5027310,5028370..5028534,5031175..5031379,5039703..5039791,5040242..5040392,5045538..5045587,5045721..5045786,5053728..5053843,5056597..5056672,5058508..5058683,5061933..5062034,5069323..5069380,5069783..5069869,5072693..5072729,5074644..5076167)
location: region:4863877-5076167:1
so has part: feature:4863877-4863936:1:exon
so has part: feature:4935347-4935445:1:exon
so has part: feature:4963633-4963713:1:exon
so has part: feature:4964485-4964544:1:exon
so has part: feature:4966063-4966206:1:exon
so has part: feature:4983931-4984010:1:exon
so has part: feature:4986740-4986793:1:exon
so has part: feature:4991525-4991606:1:exon
so has part: feature:4992339-4992439:1:exon
so has part: feature:4993082-4993139:1:exon
so has part: feature:5001185-5001293:1:exon
so has part: feature:5005933-5006143:1:exon
so has part: feature:5007414-5007507:1:exon
so has part: feature:5010267-5010346:1:exon
so has part: feature:5011102-5011186:1:exon
so has part: feature:5013746-5013836:1:exon
so has part: feature:5016142-5016237:1:exon
so has part: feature:5018211-5018305:1:exon
so has part: feature:5022030-5022171:1:exon
so has part: feature:5022937-5023021:1:exon
so has part: feature:5023352-5023476:1:exon
so has part: feature:5025264-5025315:1:exon
so has part: feature:5027208-5027310:1:exon
so has part: feature:5028370-5028534:1:exon
so has part: feature:5031175-5031379:1:exon
so has part: feature:5039703-5039791:1:exon
so has part: feature:5040242-5040392:1:exon
so has part: feature:5045538-5045587:1:exon
so has part: feature:5045721-5045786:1:exon
so has part: feature:5053728-5053843:1:exon
so has part: feature:5056597-5056672:1:exon
so has part: feature:5058508-5058683:1:exon
so has part: feature:5061933-5062034:1:exon
so has part: feature:5069323-5069380:1:exon
so has part: feature:5069783-5069869:1:exon
so has part: feature:5072693-5072729:1:exon
so has part: feature:5074644-5076167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4863877-4863936:1:exon

position:4863936:1
position: 4863936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4935347-4935445:1:exon

position:4935347:1
position: 4935347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4935445:1
position: 4935445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4963633-4963713:1:exon

position:4963633:1
position: 4963633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4963713:1
position: 4963713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4964485-4964544:1:exon

position:4964485:1
position: 4964485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4964544:1
position: 4964544
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:4966063-4966206:1:exon

position:4966063:1
position: 4966063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4966206:1
position: 4966206
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:4983931-4984010:1:exon

position:4983931:1
position: 4983931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4984010:1
position: 4984010
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:4986740-4986793:1:exon

position:4986740:1
position: 4986740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4986793:1
position: 4986793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4991525-4991606:1:exon

position:4991525:1
position: 4991525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4991606:1
position: 4991606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4992339-4992439:1:exon

position:4992339:1
position: 4992339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4992439:1
position: 4992439
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:4993082-4993139:1:exon

position:4993082:1
position: 4993082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4993139:1
position: 4993139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5001185-5001293:1:exon

position:5001185:1
position: 5001185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5001293:1
position: 5001293
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:5005933-5006143:1:exon

position:5005933:1
position: 5005933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5006143:1
position: 5006143
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:5007414-5007507:1:exon

position:5007414:1
position: 5007414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5007507:1
position: 5007507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5010267-5010346:1:exon

position:5010267:1
position: 5010267
reference: sequence
type: ForwardStrandPosition
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position:5010346:1
position: 5010346
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:5011102-5011186:1:exon

position:5011102:1
position: 5011102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5011186:1
position: 5011186
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:5013746-5013836:1:exon

position:5013746:1
position: 5013746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5013836:1
position: 5013836
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:5016142-5016237:1:exon

position:5016142:1
position: 5016142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5016237:1
position: 5016237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5018211-5018305:1:exon

position:5018211:1
position: 5018211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5018305:1
position: 5018305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5022030-5022171:1:exon

position:5022030:1
position: 5022030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5022171:1
position: 5022171
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:5022937-5023021:1:exon

position:5022937:1
position: 5022937
reference: sequence
type: ForwardStrandPosition
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position:5023021:1
position: 5023021
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:5023352-5023476:1:exon

position:5023352:1
position: 5023352
reference: sequence
type: ForwardStrandPosition
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position:5023476:1
position: 5023476
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:5025264-5025315:1:exon

position:5025264:1
position: 5025264
reference: sequence
type: ForwardStrandPosition
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position:5025315:1
position: 5025315
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:5027208-5027310:1:exon

position:5027208:1
position: 5027208
reference: sequence
type: ForwardStrandPosition
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position:5027310:1
position: 5027310
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 24
SIO_000628: feature:5028370-5028534:1:exon

position:5028370:1
position: 5028370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5028534:1
position: 5028534
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:5031175-5031379:1:exon

position:5031175:1
position: 5031175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5031379:1
position: 5031379
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:5039703-5039791:1:exon

position:5039703:1
position: 5039703
reference: sequence
type: ForwardStrandPosition
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position:5039791:1
position: 5039791
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:5040242-5040392:1:exon

position:5040242:1
position: 5040242
reference: sequence
type: ForwardStrandPosition
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position:5040392:1
position: 5040392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:5045538-5045587:1:exon

position:5045538:1
position: 5045538
reference: sequence
type: ForwardStrandPosition
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position:5045587:1
position: 5045587
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 29
SIO_000628: feature:5045721-5045786:1:exon

position:5045721:1
position: 5045721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5045786:1
position: 5045786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:5053728-5053843:1:exon

position:5053728:1
position: 5053728
reference: sequence
type: ForwardStrandPosition
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position:5053843:1
position: 5053843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:5056597-5056672:1:exon

position:5056597:1
position: 5056597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5056672:1
position: 5056672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:5058508-5058683:1:exon

position:5058508:1
position: 5058508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5058683:1
position: 5058683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:5061933-5062034:1:exon

position:5061933:1
position: 5061933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5062034:1
position: 5062034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:5069323-5069380:1:exon

position:5069323:1
position: 5069323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5069380:1
position: 5069380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:5069783-5069869:1:exon

position:5069783:1
position: 5069783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5069869:1
position: 5069869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:5072693-5072729:1:exon

position:5072693:1
position: 5072693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5072729:1
position: 5072729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:5074644-5076167:1:exon

position:5074644:1
position: 5074644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLCB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PLCB4
product: phospholipase C beta 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 5 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593353.3
SIO_010081: PLCB4
subclass of: SO_0000673
so part of: PLCB4
location: join(4863877..4863936,4935347..4935445,4963633..4963713,4964485..4964544,4966063..4966206,4983931..4984010,4986740..4986793,4991525..4991606,4992339..4992439,4993082..4993139,5001185..5001293,5005933..5006143,5007414..5007507,5010267..5010346,5011102..5011186,5013746..5013836,5016142..5016237,5018211..5018305,5022030..5022171,5022937..5023021,5023352..5023476,5025264..5025315,5027208..5027310,5028370..5028534,5031175..5031379,5039703..5039791,5040242..5040392,5045538..5045587,5045721..5045786,5053728..5053843,5056597..5056672,5058508..5058683,5061933..5062034,5069323..5069380,5069783..5069869,5074644..5076167)
location: region:4863877-5076167:1
so has part: feature:4863877-4863936:1:exon
so has part: feature:4935347-4935445:1:exon
so has part: feature:4963633-4963713:1:exon
so has part: feature:4964485-4964544:1:exon
so has part: feature:4966063-4966206:1:exon
so has part: feature:4983931-4984010:1:exon
so has part: feature:4986740-4986793:1:exon
so has part: feature:4991525-4991606:1:exon
so has part: feature:4992339-4992439:1:exon
so has part: feature:4993082-4993139:1:exon
so has part: feature:5001185-5001293:1:exon
so has part: feature:5005933-5006143:1:exon
so has part: feature:5007414-5007507:1:exon
so has part: feature:5010267-5010346:1:exon
so has part: feature:5011102-5011186:1:exon
so has part: feature:5013746-5013836:1:exon
so has part: feature:5016142-5016237:1:exon
so has part: feature:5018211-5018305:1:exon
so has part: feature:5022030-5022171:1:exon
so has part: feature:5022937-5023021:1:exon
so has part: feature:5023352-5023476:1:exon
so has part: feature:5025264-5025315:1:exon
so has part: feature:5027208-5027310:1:exon
so has part: feature:5028370-5028534:1:exon
so has part: feature:5031175-5031379:1:exon
so has part: feature:5039703-5039791:1:exon
so has part: feature:5040242-5040392:1:exon
so has part: feature:5045538-5045587:1:exon
so has part: feature:5045721-5045786:1:exon
so has part: feature:5053728-5053843:1:exon
so has part: feature:5056597-5056672:1:exon
so has part: feature:5058508-5058683:1:exon
so has part: feature:5061933-5062034:1:exon
so has part: feature:5069323-5069380:1:exon
so has part: feature:5069783-5069869:1:exon
so has part: feature:5074644-5076167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4863877-4863936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4935347-4935445:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4963633-4963713:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4964485-4964544:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4966063-4966206:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4983931-4984010:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4986740-4986793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4991525-4991606:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4992339-4992439:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4993082-4993139:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5001185-5001293:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5005933-5006143:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5007414-5007507:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5010267-5010346:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5011102-5011186:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5013746-5013836:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5016142-5016237:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5018211-5018305:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5022030-5022171:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5022937-5023021:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5023352-5023476:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5025264-5025315:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5027208-5027310:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5028370-5028534:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5031175-5031379:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5039703-5039791:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5040242-5040392:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5045538-5045587:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5045721-5045786:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5053728-5053843:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5056597-5056672:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5058508-5058683:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5061933-5062034:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5069323-5069380:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5069783-5069869:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5074644-5076167:1:exon

PLCB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PLCB4
product: phospholipase C beta 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036497119.1
SIO_010081: PLCB4
subclass of: SO_0000673
so part of: PLCB4
location: join(4935352..4935445,4963633..4963713,4964485..4964544,4966063..4966206,4983931..4984010,4986740..4986793,4991525..4991606,4992339..4992439,4993082..4993139,5001185..5001293,5005933..5006143,5007414..5007507,5010267..5010346,5011102..5011186,5013746..5013836,5016142..5016237,5018211..5018310,5019372..5019395,5022023..5022171,5022937..5023021,5023352..5023476,5025264..5025315,5027208..5027310,5028370..5028534,5031175..5031379,5039703..5039791,5040242..5040392,5045538..5045587,5045721..5045786,5053728..5053843,5056597..5056672,5058508..5058683,5061933..5062034,5069323..5069380,5069783..5069869,5074644..5074712)
location: region:4935352-5074712:1
so has part: feature:4935352-4935445:1:exon
so has part: feature:4963633-4963713:1:exon
so has part: feature:4964485-4964544:1:exon
so has part: feature:4966063-4966206:1:exon
so has part: feature:4983931-4984010:1:exon
so has part: feature:4986740-4986793:1:exon
so has part: feature:4991525-4991606:1:exon
so has part: feature:4992339-4992439:1:exon
so has part: feature:4993082-4993139:1:exon
so has part: feature:5001185-5001293:1:exon
so has part: feature:5005933-5006143:1:exon
so has part: feature:5007414-5007507:1:exon
so has part: feature:5010267-5010346:1:exon
so has part: feature:5011102-5011186:1:exon
so has part: feature:5013746-5013836:1:exon
so has part: feature:5016142-5016237:1:exon
so has part: feature:5018211-5018310:1:exon
so has part: feature:5019372-5019395:1:exon
so has part: feature:5022023-5022171:1:exon
so has part: feature:5022937-5023021:1:exon
so has part: feature:5023352-5023476:1:exon
so has part: feature:5025264-5025315:1:exon
so has part: feature:5027208-5027310:1:exon
so has part: feature:5028370-5028534:1:exon
so has part: feature:5031175-5031379:1:exon
so has part: feature:5039703-5039791:1:exon
so has part: feature:5040242-5040392:1:exon
so has part: feature:5045538-5045587:1:exon
so has part: feature:5045721-5045786:1:exon
so has part: feature:5053728-5053843:1:exon
so has part: feature:5056597-5056672:1:exon
so has part: feature:5058508-5058683:1:exon
so has part: feature:5061933-5062034:1:exon
so has part: feature:5069323-5069380:1:exon
so has part: feature:5069783-5069869:1:exon
so has part: feature:5074644-5074712:1:exon

position:4935352:1
position: 4935352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5074712:1
position: 5074712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4935352-4935445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4963633-4963713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4964485-4964544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4966063-4966206:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4983931-4984010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4986740-4986793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4991525-4991606:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4992339-4992439:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4993082-4993139:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5001185-5001293:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5005933-5006143:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5007414-5007507:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5010267-5010346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5011102-5011186:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5013746-5013836:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5016142-5016237:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5018211-5018310:1:exon

position:5018310:1
position: 5018310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5019372-5019395:1:exon

position:5019372:1
position: 5019372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5019395:1
position: 5019395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5022023-5022171:1:exon

position:5022023:1
position: 5022023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5022937-5023021:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5023352-5023476:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5025264-5025315:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5027208-5027310:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5028370-5028534:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5031175-5031379:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5039703-5039791:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5040242-5040392:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5045538-5045587:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5045721-5045786:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5053728-5053843:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5056597-5056672:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5058508-5058683:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5061933-5062034:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5069323-5069380:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5069783-5069869:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5074644-5074712:1:exon

PLCB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PLCB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1
translation: MAKPYEFNWQKEVPSFLQEGAVFDRYEEESFVFEPNCLFKVDEFGFFLTWKSEGKEGQVLECSLINSIRSGAVPKDPKILAALEAVGKSESDLEGRIVCVCSGTDLVNISFTYMVAENPEVTKQWVEGLRSIIHNFRANNVSPMTCLKKHWMKLAFMTNTSGKIPVRSITRTFASGKTEKVIFQALKELGLPSGKNDEIEPAAFTYEKFYELTQKICPRTDIEDLFKKINGDKTDYLTVDQLVSFLNEHQRDPRLNEILFPFYDAKRAMQIIEMYEPDEDLKKKGLISSDGFCRYLMSDENAPVFLDRLELYQEMDHPLAHYFISSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCVELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQAIKETAFVTSEYPVILSFENHCSKYQQYKMSKYCEDLFGDLLLKHALESHPLEPGRPLPSPNDLKRKILIKNKRLKPEVEKKQLEALKSVMEAGESAAPANILEDDNEEEIESADQEEEAHPEFKFGNELDDLGHKEAVANSVKKGLVTVEDEQAWMASYKYVGATTNIHPYLSTMINYAQPVKFQGFHVAEERNIHYNMSSFNESVGLGYLKTHAIEFVNYNKRQMSRIYPKGGRVDSSNYMPQIFWNAGCQMVSLNYQTPDLAMQLNQGKFEYNGSCGYLLKPDFMRRPDRTFDPFSETPVDGVIAATCSVQVISGQFLSDKKIGTYVEVDMYGLPTDTIRKEFRTRMVMNNGLNPVYNEESFVFRKVILPDLAVLRIAVYDDNNKLIGQRILPLDGLQAGYRHISLRNEGNKPLSLPTIFCNIVLKTYVPDGFGDIVDALSDPKKFLSITEKRADQMRAMGIETSDIADVPSDTSKNDKKGKANTAKASVTPQSSSELRPTTTAALASGVEAKKGIELIPQVRIEDLKQMKAYLKHLKKQQKELSSLKKKHAKEHSTMQKLHCTQVDKIVAQFDKEKSTHEKILEKAMKKKGGSNCLEMKKETEIKIQTLTSDHKSKVKEIVAQHTKEWSEMINTHSAEEQEIRDLHLSQQCELLKKLLINAHEQQTQQLRLSHDRESKEMRAHQAKISMENSKAISQDKSIKNKAERERRVRELNSSNTKKFLEERKRLAMKQSKEMDQLKKVQLEHLEFLERQNEQLLKSCHAVSQTQGEGDAADGEIGSRDGPQTSNHSVKLQNAN
SIO_010081: PLCB4
subclass of: SO_0000673
so part of: PLCB4
location: join(4935362..4935445,4963633..4963713,4964485..4964544,4966063..4966206,4983931..4984010,4986740..4986793,4991525..4991606,4992339..4992439,4993082..4993139,5001185..5001293,5005933..5006143,5007414..5007507,5010267..5010346,5011102..5011186,5013746..5013836,5016142..5016237,5018211..5018305,5022030..5022171,5022937..5023021,5023352..5023476,5025264..5025315,5027208..5027310,5028370..5028534,5031175..5031379,5039703..5039791,5040242..5040392,5045538..5045587,5045721..5045786,5053728..5053843,5056597..5056672,5058508..5058683,5061933..5062034,5069323..5069380,5069783..5069869,5072693..5072729,5074644..5074732)
location: region:4935362-5074732:1
so has part: feature:4935362-4935445:1:exon
so has part: feature:4963633-4963713:1:exon
so has part: feature:4964485-4964544:1:exon
so has part: feature:4966063-4966206:1:exon
so has part: feature:4983931-4984010:1:exon
so has part: feature:4986740-4986793:1:exon
so has part: feature:4991525-4991606:1:exon
so has part: feature:4992339-4992439:1:exon
so has part: feature:4993082-4993139:1:exon
so has part: feature:5001185-5001293:1:exon
so has part: feature:5005933-5006143:1:exon
so has part: feature:5007414-5007507:1:exon
so has part: feature:5010267-5010346:1:exon
so has part: feature:5011102-5011186:1:exon
so has part: feature:5013746-5013836:1:exon
so has part: feature:5016142-5016237:1:exon
so has part: feature:5018211-5018305:1:exon
so has part: feature:5022030-5022171:1:exon
so has part: feature:5022937-5023021:1:exon
so has part: feature:5023352-5023476:1:exon
so has part: feature:5025264-5025315:1:exon
so has part: feature:5027208-5027310:1:exon
so has part: feature:5028370-5028534:1:exon
so has part: feature:5031175-5031379:1:exon
so has part: feature:5039703-5039791:1:exon
so has part: feature:5040242-5040392:1:exon
so has part: feature:5045538-5045587:1:exon
so has part: feature:5045721-5045786:1:exon
so has part: feature:5053728-5053843:1:exon
so has part: feature:5056597-5056672:1:exon
so has part: feature:5058508-5058683:1:exon
so has part: feature:5061933-5062034:1:exon
so has part: feature:5069323-5069380:1:exon
so has part: feature:5069783-5069869:1:exon
so has part: feature:5072693-5072729:1:exon
so has part: feature:5074644-5074732:1:exon

XP_004593409.1
type: Protein
SIO_000068: ncbiprotein

position:4935362:1
position: 4935362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5074732:1
position: 5074732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4935362-4935445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4963633-4963713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4964485-4964544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4966063-4966206:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4983931-4984010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4986740-4986793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4991525-4991606:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4992339-4992439:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4993082-4993139:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5001185-5001293:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5005933-5006143:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5007414-5007507:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5010267-5010346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5011102-5011186:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5013746-5013836:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5016142-5016237:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5018211-5018305:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5022030-5022171:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5022937-5023021:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5023352-5023476:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5025264-5025315:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5027208-5027310:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5028370-5028534:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5031175-5031379:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5039703-5039791:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5040242-5040392:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5045538-5045587:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5045721-5045786:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5053728-5053843:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5056597-5056672:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5058508-5058683:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5061933-5062034:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5069323-5069380:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5069783-5069869:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5072693-5072729:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5074644-5074732:1:exon

PLCB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PLCB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X3
translation: MAKPYEFNWQKEVPSFLQEGAVFDRYEEESFVFEPNCLFKVDEFGFFLTWKSEGKEGQVLECSLINSIRSGAVPKDPKILAALEAVGKSESDLEGRIVCVCSGTDLVNISFTYMVAENPEVTKQWVEGLRSIIHNFRANNVSPMTCLKKHWMKLAFMTNTSGKIPVRSITRTFASGKTEKVIFQALKELGLPSGKNDEIEPAAFTYEKFYELTQKICPRTDIEDLFKKINGDKTDYLTVDQLVSFLNEHQRDPRLNEILFPFYDAKRAMQIIEMYEPDEDLKKKGLISSDGFCRYLMSDENAPVFLDRLELYQEMDHPLAHYFISSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCVELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQAIKETAFVTSEYPVILSFENHCSKYQQYKMSKYCEDLFGDLLLKHALESHPLEPGRPLPSPNDLKRKILIKNKRLKPEVEKKQLEALKSVMEAGESAAPANILEDDNEEEIESADQEEEAHPEFKFGNELDDLGHKEAVANSVKKVSDEMEGERNSQGLVTVEDEQAWMASYKYVGATTNIHPYLSTMINYAQPVKFQGFHVAEERNIHYNMSSFNESVGLGYLKTHAIEFVNYNKRQMSRIYPKGGRVDSSNYMPQIFWNAGCQMVSLNYQTPDLAMQLNQGKFEYNGSCGYLLKPDFMRRPDRTFDPFSETPVDGVIAATCSVQVISGQFLSDKKIGTYVEVDMYGLPTDTIRKEFRTRMVMNNGLNPVYNEESFVFRKVILPDLAVLRIAVYDDNNKLIGQRILPLDGLQAGYRHISLRNEGNKPLSLPTIFCNIVLKTYVPDGFGDIVDALSDPKKFLSITEKRADQMRAMGIETSDIADVPSDTSKNDKKGKANTAKASVTPQSSSELRPTTTAALASGVEAKKGIELIPQVRIEDLKQMKAYLKHLKKQQKELSSLKKKHAKEHSTMQKLHCTQVDKIVAQFDKEKSTHEKILEKAMKKKGGSNCLEMKKETEIKIQTLTSDHKSKVKEIVAQHTKEWSEMINTHSAEEQEIRDLHLSQQCELLKKLLINAHEQQTQQLRLSHDRESKEMRAHQAKISMENSKAISQDKSIKNKAERERRVRELNSSNTKKFLEERKRLAMKQSKEMDQLKKVQLEHLEFLERQNEQAKEMQQMVKLEAEMDRRPATIV
SIO_010081: PLCB4
subclass of: SO_0000673
so part of: PLCB4
location: join(4935362..4935445,4963633..4963713,4964485..4964544,4966063..4966206,4983931..4984010,4986740..4986793,4991525..4991606,4992339..4992439,4993082..4993139,5001185..5001293,5005933..5006143,5007414..5007507,5010267..5010346,5011102..5011186,5013746..5013836,5016142..5016237,5018211..5018310,5019372..5019395,5022023..5022171,5022937..5023021,5023352..5023476,5025264..5025315,5027208..5027310,5028370..5028534,5031175..5031379,5039703..5039791,5040242..5040392,5045538..5045587,5045721..5045786,5053728..5053843,5056597..5056672,5058508..5058683,5061933..5062034,5069323..5069380,5069783..5069869,5074644..5074712)
location: region:4935362-5074712:1
so has part: feature:4935362-4935445:1:exon
so has part: feature:4963633-4963713:1:exon
so has part: feature:4964485-4964544:1:exon
so has part: feature:4966063-4966206:1:exon
so has part: feature:4983931-4984010:1:exon
so has part: feature:4986740-4986793:1:exon
so has part: feature:4991525-4991606:1:exon
so has part: feature:4992339-4992439:1:exon
so has part: feature:4993082-4993139:1:exon
so has part: feature:5001185-5001293:1:exon
so has part: feature:5005933-5006143:1:exon
so has part: feature:5007414-5007507:1:exon
so has part: feature:5010267-5010346:1:exon
so has part: feature:5011102-5011186:1:exon
so has part: feature:5013746-5013836:1:exon
so has part: feature:5016142-5016237:1:exon
so has part: feature:5018211-5018310:1:exon
so has part: feature:5019372-5019395:1:exon
so has part: feature:5022023-5022171:1:exon
so has part: feature:5022937-5023021:1:exon
so has part: feature:5023352-5023476:1:exon
so has part: feature:5025264-5025315:1:exon
so has part: feature:5027208-5027310:1:exon
so has part: feature:5028370-5028534:1:exon
so has part: feature:5031175-5031379:1:exon
so has part: feature:5039703-5039791:1:exon
so has part: feature:5040242-5040392:1:exon
so has part: feature:5045538-5045587:1:exon
so has part: feature:5045721-5045786:1:exon
so has part: feature:5053728-5053843:1:exon
so has part: feature:5056597-5056672:1:exon
so has part: feature:5058508-5058683:1:exon
so has part: feature:5061933-5062034:1:exon
so has part: feature:5069323-5069380:1:exon
so has part: feature:5069783-5069869:1:exon
so has part: feature:5074644-5074712:1:exon

XP_036353012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4935362-4935445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4963633-4963713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4964485-4964544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4966063-4966206:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4983931-4984010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4986740-4986793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4991525-4991606:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4992339-4992439:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4993082-4993139:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5001185-5001293:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5005933-5006143:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5007414-5007507:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5010267-5010346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5011102-5011186:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5013746-5013836:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5016142-5016237:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5018211-5018310:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5019372-5019395:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5022023-5022171:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5022937-5023021:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5023352-5023476:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5025264-5025315:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5027208-5027310:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5028370-5028534:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5031175-5031379:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5039703-5039791:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5040242-5040392:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5045538-5045587:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5045721-5045786:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5053728-5053843:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5056597-5056672:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5058508-5058683:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5061933-5062034:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5069323-5069380:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5069783-5069869:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5074644-5074712:1:exon

PLCB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PLCB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X2
translation: MAKPYEFNWQKEVPSFLQEGAVFDRYEEESFVFEPNCLFKVDEFGFFLTWKSEGKEGQVLECSLINSIRSGAVPKDPKILAALEAVGKSESDLEGRIVCVCSGTDLVNISFTYMVAENPEVTKQWVEGLRSIIHNFRANNVSPMTCLKKHWMKLAFMTNTSGKIPVRSITRTFASGKTEKVIFQALKELGLPSGKNDEIEPAAFTYEKFYELTQKICPRTDIEDLFKKINGDKTDYLTVDQLVSFLNEHQRDPRLNEILFPFYDAKRAMQIIEMYEPDEDLKKKGLISSDGFCRYLMSDENAPVFLDRLELYQEMDHPLAHYFISSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCVELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQAIKETAFVTSEYPVILSFENHCSKYQQYKMSKYCEDLFGDLLLKHALESHPLEPGRPLPSPNDLKRKILIKNKRLKPEVEKKQLEALKSVMEAGESAAPANILEDDNEEEIESADQEEEAHPEFKFGNELDDLGHKEAVANSVKKGLVTVEDEQAWMASYKYVGATTNIHPYLSTMINYAQPVKFQGFHVAEERNIHYNMSSFNESVGLGYLKTHAIEFVNYNKRQMSRIYPKGGRVDSSNYMPQIFWNAGCQMVSLNYQTPDLAMQLNQGKFEYNGSCGYLLKPDFMRRPDRTFDPFSETPVDGVIAATCSVQVISGQFLSDKKIGTYVEVDMYGLPTDTIRKEFRTRMVMNNGLNPVYNEESFVFRKVILPDLAVLRIAVYDDNNKLIGQRILPLDGLQAGYRHISLRNEGNKPLSLPTIFCNIVLKTYVPDGFGDIVDALSDPKKFLSITEKRADQMRAMGIETSDIADVPSDTSKNDKKGKANTAKASVTPQSSSELRPTTTAALASGVEAKKGIELIPQVRIEDLKQMKAYLKHLKKQQKELSSLKKKHAKEHSTMQKLHCTQVDKIVAQFDKEKSTHEKILEKAMKKKGGSNCLEMKKETEIKIQTLTSDHKSKVKEIVAQHTKEWSEMINTHSAEEQEIRDLHLSQQCELLKKLLINAHEQQTQQLRLSHDRESKEMRAHQAKISMENSKAISQDKSIKNKAERERRVRELNSSNTKKFLEERKRLAMKQSKEMDQLKKVQLEHLEFLERQNEQAKEMQQMVKLEAEMDRRPATIV
SIO_010081: PLCB4
subclass of: SO_0000673
so part of: PLCB4
location: join(4935362..4935445,4963633..4963713,4964485..4964544,4966063..4966206,4983931..4984010,4986740..4986793,4991525..4991606,4992339..4992439,4993082..4993139,5001185..5001293,5005933..5006143,5007414..5007507,5010267..5010346,5011102..5011186,5013746..5013836,5016142..5016237,5018211..5018305,5022030..5022171,5022937..5023021,5023352..5023476,5025264..5025315,5027208..5027310,5028370..5028534,5031175..5031379,5039703..5039791,5040242..5040392,5045538..5045587,5045721..5045786,5053728..5053843,5056597..5056672,5058508..5058683,5061933..5062034,5069323..5069380,5069783..5069869,5074644..5074712)
location: region:4935362-5074712:1
so has part: feature:4935362-4935445:1:exon
so has part: feature:4963633-4963713:1:exon
so has part: feature:4964485-4964544:1:exon
so has part: feature:4966063-4966206:1:exon
so has part: feature:4983931-4984010:1:exon
so has part: feature:4986740-4986793:1:exon
so has part: feature:4991525-4991606:1:exon
so has part: feature:4992339-4992439:1:exon
so has part: feature:4993082-4993139:1:exon
so has part: feature:5001185-5001293:1:exon
so has part: feature:5005933-5006143:1:exon
so has part: feature:5007414-5007507:1:exon
so has part: feature:5010267-5010346:1:exon
so has part: feature:5011102-5011186:1:exon
so has part: feature:5013746-5013836:1:exon
so has part: feature:5016142-5016237:1:exon
so has part: feature:5018211-5018305:1:exon
so has part: feature:5022030-5022171:1:exon
so has part: feature:5022937-5023021:1:exon
so has part: feature:5023352-5023476:1:exon
so has part: feature:5025264-5025315:1:exon
so has part: feature:5027208-5027310:1:exon
so has part: feature:5028370-5028534:1:exon
so has part: feature:5031175-5031379:1:exon
so has part: feature:5039703-5039791:1:exon
so has part: feature:5040242-5040392:1:exon
so has part: feature:5045538-5045587:1:exon
so has part: feature:5045721-5045786:1:exon
so has part: feature:5053728-5053843:1:exon
so has part: feature:5056597-5056672:1:exon
so has part: feature:5058508-5058683:1:exon
so has part: feature:5061933-5062034:1:exon
so has part: feature:5069323-5069380:1:exon
so has part: feature:5069783-5069869:1:exon
so has part: feature:5074644-5074712:1:exon

XP_004593410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4935362-4935445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4963633-4963713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4964485-4964544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4966063-4966206:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4983931-4984010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4986740-4986793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4991525-4991606:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4992339-4992439:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4993082-4993139:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5001185-5001293:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5005933-5006143:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5007414-5007507:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5010267-5010346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5011102-5011186:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5013746-5013836:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5016142-5016237:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5018211-5018305:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5022030-5022171:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5022937-5023021:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5023352-5023476:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5025264-5025315:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5027208-5027310:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5028370-5028534:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5031175-5031379:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5039703-5039791:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5040242-5040392:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5045538-5045587:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5045721-5045786:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5053728-5053843:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5056597-5056672:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5058508-5058683:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5061933-5062034:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5069323-5069380:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5069783-5069869:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5074644-5074712:1:exon

LAMP5
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LAMP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5094217..5106885
location: region:5094217-5106885:1
so has part: feature:5094217-5106885:1:exon
subclass of: SO_0000010

101525131
type: Gene
SIO_000068: ncbigene

position:5094217:1
position: 5094217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5106885:1
position: 5106885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5094217-5106885:1:exon

LAMP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LAMP5
product: lysosomal associated membrane protein family member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593354.2
SIO_010081: LAMP5
subclass of: SO_0000673
so part of: LAMP5
location: join(5094217..5094280,5094853..5095025,5095406..5095537,5095651..5095756,5097072..5097260,5106086..5106885)
location: region:5094217-5106885:1
so has part: feature:5094217-5094280:1:exon
so has part: feature:5094853-5095025:1:exon
so has part: feature:5095406-5095537:1:exon
so has part: feature:5095651-5095756:1:exon
so has part: feature:5097072-5097260:1:exon
so has part: feature:5106086-5106885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5094217-5094280:1:exon

position:5094280:1
position: 5094280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5094853-5095025:1:exon

position:5094853:1
position: 5094853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5095025:1
position: 5095025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5095406-5095537:1:exon

position:5095406:1
position: 5095406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5095537:1
position: 5095537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5095651-5095756:1:exon

position:5095651:1
position: 5095651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5095756:1
position: 5095756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5097072-5097260:1:exon

position:5097072:1
position: 5097072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5097260:1
position: 5097260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5106086-5106885:1:exon

position:5106086:1
position: 5106086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LAMP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LAMP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosome-associated membrane glycoprotein 5
translation: MELRARALLGGHTLGVLLVLFHTSTRIVAEQEVENLSGLSTNPEKDIFVVRENGTTCLMAEFAAKFIVPYDVWASNYVDLITEQADIALTRGAEVQGHCGHNESELQVFWVDRAYTLKLLFVKESHNTSKGPEATWRLSKVQFVYDSSEKTHFKDAVSAGKHTANSHHLSALVTPAGKSYECQAQQTISLASSDPQKTVTMILSAVHIQPFDIISDFVFSEEHKCPVDEREQLEETLPLVLGLILGLVIVVTLVIYHIHHKMTANQVQIPRDRSQYKHMG
SIO_010081: LAMP5
subclass of: SO_0000673
so part of: LAMP5
location: join(5094217..5094280,5094853..5095025,5095406..5095537,5095651..5095756,5097072..5097260,5106086..5106264)
location: region:5094217-5106264:1
so has part: feature:5094217-5094280:1:exon
so has part: feature:5094853-5095025:1:exon
so has part: feature:5095406-5095537:1:exon
so has part: feature:5095651-5095756:1:exon
so has part: feature:5097072-5097260:1:exon
so has part: feature:5106086-5106264:1:exon

XP_004593411.1
type: Protein
SIO_000068: ncbiprotein

position:5106264:1
position: 5106264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5094217-5094280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5094853-5095025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5095406-5095537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5095651-5095756:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5097072-5097260:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5106086-5106264:1:exon

PAK5
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PAK5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5116626..5406917)
location: region:5116626-5406917:-1
so has part: feature:5116626-5406917:-1:exon
subclass of: SO_0000010

101517756
type: Gene
SIO_000068: ncbigene

position:5116626:-1
position: 5116626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5406917:-1
position: 5406917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5116626-5406917:-1:exon

PAK5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PAK5
product: p21 (RAC1) activated kinase 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593396.3
SIO_010081: PAK5
subclass of: SO_0000673
so part of: PAK5
location: complement(join(5116626..5117144,5118755..5118889,5135006..5135132,5145123..5145256,5148523..5149014,5161430..5162215,5238388..5238602,5297915..5298066,5406814..5406917))
location: region:5116626-5406917:-1
so has part: feature:5406814-5406917:-1:exon
so has part: feature:5297915-5298066:-1:exon
so has part: feature:5238388-5238602:-1:exon
so has part: feature:5161430-5162215:-1:exon
so has part: feature:5148523-5149014:-1:exon
so has part: feature:5145123-5145256:-1:exon
so has part: feature:5135006-5135132:-1:exon
so has part: feature:5118755-5118889:-1:exon
so has part: feature:5116626-5117144:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5406814-5406917:-1:exon

position:5406814:-1
position: 5406814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5297915-5298066:-1:exon

position:5297915:-1
position: 5297915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5298066:-1
position: 5298066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5238388-5238602:-1:exon

position:5238388:-1
position: 5238388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5238602:-1
position: 5238602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5161430-5162215:-1:exon

position:5161430:-1
position: 5161430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5162215:-1
position: 5162215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5148523-5149014:-1:exon

position:5148523:-1
position: 5148523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5149014:-1
position: 5149014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5145123-5145256:-1:exon

position:5145123:-1
position: 5145123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5145256:-1
position: 5145256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5135006-5135132:-1:exon

position:5135006:-1
position: 5135006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5135132:-1
position: 5135132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5118755-5118889:-1:exon

position:5118755:-1
position: 5118755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5118889:-1
position: 5118889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5116626-5117144:-1:exon

position:5117144:-1
position: 5117144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAK5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PAK5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 5
translation: MFGKKKKKIEISGPSNFEHRVHTGFDPQEQKFTGLPQQWHSLLADTANRPKPMVDPSCITPIQLAPMKTIVRGNKPCKETSINGLLEDFDNISVTRSNSLRKESPPTPDQGASSHGLGHSEENGFITFSQYSSESDTTVDYLTEKYREKSLYGDDLDPYYKGSHGTKQNGHVMRMKHGEAYYSDMKPVKGELARFPVDYHTHLDSLSKPGHYSDLKWEYQRASSCSPLDYPFQFMPSRTAGASGCSKESLAYSESEWAPSLEDYDRRPKSSYMNQTSPQPGMRQRSRSGSGLQEPMMPFGASAFKTHPQGHSYSSYTYPRLSEPTMCFPKVDYDRAQMVFSPPLSGSDTYPRGPAKLPQSQSKVSYSSSSHQYPSEYHKASLYHQPSLQTSSQYISTASYLSSLSISSSTYPPPSWGSSSDQQPSRVSHEQFRAALQLVVSPGDPREYLDNFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKISSVLRGFLDLMLVREPSQRATAQELLGHPFLKLAGPPSCIVPLMRQYRHH
SIO_010081: PAK5
subclass of: SO_0000673
so part of: PAK5
location: complement(join(5116989..5117144,5118755..5118889,5135006..5135132,5145123..5145256,5148523..5149014,5161430..5162215,5238388..5238591))
location: region:5116989-5238591:-1
so has part: feature:5238388-5238591:-1:exon
so has part: feature:5161430-5162215:-1:exon
so has part: feature:5148523-5149014:-1:exon
so has part: feature:5145123-5145256:-1:exon
so has part: feature:5135006-5135132:-1:exon
so has part: feature:5118755-5118889:-1:exon
so has part: feature:5116989-5117144:-1:exon

XP_004593453.1
type: Protein
SIO_000068: ncbiprotein

position:5116989:-1
position: 5116989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5238591:-1
position: 5238591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5238388-5238591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5161430-5162215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5148523-5149014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5145123-5145256:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5135006-5135132:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5118755-5118889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5116989-5117144:-1:exon

ANKEF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ANKEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5492220..5509225
location: region:5492220-5509225:1
so has part: feature:5492220-5509225:1:exon
subclass of: SO_0000010

101525373
type: Gene
SIO_000068: ncbigene

position:5492220:1
position: 5492220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5509225:1
position: 5509225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5492220-5509225:1:exon

ANKEF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ANKEF1
product: ankyrin repeat and EF-hand domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004593355.3
SIO_010081: ANKEF1
subclass of: SO_0000673
so part of: ANKEF1
location: join(5492220..5492604,5496408..5496607,5497323..5497472,5499059..5499182,5502690..5503512,5505318..5505544,5506627..5506790,5507953..5508090,5508888..5509225)
location: region:5492220-5509225:1
so has part: feature:5492220-5492604:1:exon
so has part: feature:5496408-5496607:1:exon
so has part: feature:5497323-5497472:1:exon
so has part: feature:5499059-5499182:1:exon
so has part: feature:5502690-5503512:1:exon
so has part: feature:5505318-5505544:1:exon
so has part: feature:5506627-5506790:1:exon
so has part: feature:5507953-5508090:1:exon
so has part: feature:5508888-5509225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5492220-5492604:1:exon

position:5492604:1
position: 5492604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5496408-5496607:1:exon

position:5496408:1
position: 5496408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5496607:1
position: 5496607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5497323-5497472:1:exon

position:5497323:1
position: 5497323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5497472:1
position: 5497472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5499059-5499182:1:exon

position:5499059:1
position: 5499059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5499182:1
position: 5499182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5502690-5503512:1:exon

position:5502690:1
position: 5502690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5503512:1
position: 5503512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5505318-5505544:1:exon

position:5505318:1
position: 5505318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5505544:1
position: 5505544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5506627-5506790:1:exon

position:5506627:1
position: 5506627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5506790:1
position: 5506790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5507953-5508090:1:exon

position:5507953:1
position: 5507953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5508090:1
position: 5508090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5508888-5509225:1:exon

position:5508888:1
position: 5508888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANKEF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ANKEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and EF-hand domain-containing protein 1
translation: MALADKRLENLQIYKVLQCVRNKDKAQIEKLIKFGYPELVNFTEPVNGISALHLASVSNDIDMVSFLLELGAHPDVQDRMGCTPTMRAAELGHELSMEILAKAKADMTIVDNEGKGVLFYCILPTKRHYRCSLIALEHGADVNNSTYEGKPVFLRACEEAHDVKEMCLTFLEKGANPNAINSSTGRTALMEASREGVLEIVRGILERGGEVNTFDNERHHAAHFAAKGGFFDILRLLFAYDGDMGLIAMNGNTPLHYAAMGGFADCCKYIAQRGCDLKWKNLEHKTPKAVAKDGGFKAASKEIRRAERIANKLAKPGVKNPNPLWALRLHDWSTEHETFLREGFSFVDRGDGTVSKEDFVLVLEERQDFATSEQLASIAQLHEKSRGGGVNINEFFKGTRYLSKSFVLGSYGPKKRKKGPGRKGRKGKFVLPLPICFIPESAFPRRPDGGPPYYMIETYQNVTDYSRFNRDHPPEHPIQDDSAWYIDDPSAVFANINFITKAGDLASLKRAFEGGIPVDMKDNCYKTPLMTACASGNIEVVKFLLEKGANVNATDNFLWTPLHFACHAGQQDIVELLVKSGASVDALSLNNSTPLSRAIESCRMDTVKYLLDIGAKFQLENRRGHNAMDVAKAYADYRIIGLIKEKLDNLPKPTENPKVKGKPPPKPKTEGAEIKKEEELLTSVYAVPTISEEKKMRKDNVVHLNSLITSGHTKKVDITFVPRRVWSPEATTTELIRKRELQRERFTYEVDFDDFMMPFQKNITEKARALEAALKT
SIO_010081: ANKEF1
subclass of: SO_0000673
so part of: ANKEF1
location: join(5492259..5492604,5496408..5496607,5497323..5497472,5499059..5499182,5502690..5503512,5505318..5505544,5506627..5506790,5507953..5508090,5508888..5509046)
location: region:5492259-5509046:1
so has part: feature:5492259-5492604:1:exon
so has part: feature:5496408-5496607:1:exon
so has part: feature:5497323-5497472:1:exon
so has part: feature:5499059-5499182:1:exon
so has part: feature:5502690-5503512:1:exon
so has part: feature:5505318-5505544:1:exon
so has part: feature:5506627-5506790:1:exon
so has part: feature:5507953-5508090:1:exon
so has part: feature:5508888-5509046:1:exon

XP_004593412.1
type: Protein
SIO_000068: ncbiprotein

position:5492259:1
position: 5492259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5509046:1
position: 5509046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5492259-5492604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5496408-5496607:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5497323-5497472:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5499059-5499182:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5502690-5503512:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5505318-5505544:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5506627-5506790:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5507953-5508090:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5508888-5509046:1:exon

LOC101525618
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101525618
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5630183..5630511
location: region:5630183-5630511:1
so has part: feature:5630183-5630511:1:exon

101525618
type: Gene
SIO_000068: ncbigene

position:5630183:1
position: 5630183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5630511:1
position: 5630511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5630183-5630511:1:exon

LOC101525618
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101525618
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC101525618
subclass of: SO_0000673
so part of: LOC101525618
location: 5630183..5630511
location: region:5630183-5630511:1
so has part: feature:5630183-5630511:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5630183-5630511:1:exon

SNAP25
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SNAP25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5665307..5749335
location: region:5665307-5749335:1
so has part: feature:5665307-5749335:1:exon
subclass of: SO_0000010

101525855
type: Gene
SIO_000068: ncbigene

position:5665307:1
position: 5665307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5749335:1
position: 5749335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5665307-5749335:1:exon

SNAP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SNAP25
product: synaptosome associated protein 25, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004593357.2
SIO_010081: SNAP25
subclass of: SO_0000673
so part of: SNAP25
location: join(5665307..5665456,5721803..5721938,5723483..5723524,5730014..5730062,5736713..5736830,5740720..5740845,5743395..5743539,5748067..5749335)
location: region:5665307-5749335:1
so has part: feature:5665307-5665456:1:exon
so has part: feature:5721803-5721938:1:exon
so has part: feature:5723483-5723524:1:exon
so has part: feature:5730014-5730062:1:exon
so has part: feature:5736713-5736830:1:exon
so has part: feature:5740720-5740845:1:exon
so has part: feature:5743395-5743539:1:exon
so has part: feature:5748067-5749335:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5665307-5665456:1:exon

position:5665456:1
position: 5665456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5721803-5721938:1:exon

position:5721803:1
position: 5721803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5721938:1
position: 5721938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5723483-5723524:1:exon

position:5723483:1
position: 5723483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5723524:1
position: 5723524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5730014-5730062:1:exon

position:5730014:1
position: 5730014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5730062:1
position: 5730062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5736713-5736830:1:exon

position:5736713:1
position: 5736713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5736830:1
position: 5736830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5740720-5740845:1:exon

position:5740720:1
position: 5740720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5740845:1
position: 5740845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5743395-5743539:1:exon

position:5743395:1
position: 5743395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5743539:1
position: 5743539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5748067-5749335:1:exon

position:5748067:1
position: 5748067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNAP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SNAP25
product: synaptosome associated protein 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004593356.2
SIO_010081: SNAP25
subclass of: SO_0000673
so part of: SNAP25
location: join(5665307..5665456,5721803..5721938,5723483..5723524,5730014..5730062,5737002..5737119,5740720..5740845,5743395..5743539,5748067..5749335)
location: region:5665307-5749335:1
so has part: feature:5665307-5665456:1:exon
so has part: feature:5721803-5721938:1:exon
so has part: feature:5723483-5723524:1:exon
so has part: feature:5730014-5730062:1:exon
so has part: feature:5737002-5737119:1:exon
so has part: feature:5740720-5740845:1:exon
so has part: feature:5743395-5743539:1:exon
so has part: feature:5748067-5749335:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5665307-5665456:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5721803-5721938:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5723483-5723524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5730014-5730062:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5737002-5737119:1:exon

position:5737002:1
position: 5737002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5737119:1
position: 5737119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5740720-5740845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5743395-5743539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5748067-5749335:1:exon

SNAP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SNAP25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptosomal-associated protein 25 isoform X2
translation: MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLGSG
SIO_010081: SNAP25
subclass of: SO_0000673
so part of: SNAP25
location: join(5721867..5721938,5723483..5723524,5730014..5730062,5736713..5736830,5740720..5740845,5743395..5743539,5748067..5748135)
location: region:5721867-5748135:1
so has part: feature:5721867-5721938:1:exon
so has part: feature:5723483-5723524:1:exon
so has part: feature:5730014-5730062:1:exon
so has part: feature:5736713-5736830:1:exon
so has part: feature:5740720-5740845:1:exon
so has part: feature:5743395-5743539:1:exon
so has part: feature:5748067-5748135:1:exon

XP_004593414.1
type: Protein
SIO_000068: ncbiprotein

position:5721867:1
position: 5721867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5748135:1
position: 5748135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5721867-5721938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5723483-5723524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5730014-5730062:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5736713-5736830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5740720-5740845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5743395-5743539:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5748067-5748135:1:exon

SNAP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SNAP25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptosomal-associated protein 25 isoform X1
translation: MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLGSG
SIO_010081: SNAP25
subclass of: SO_0000673
so part of: SNAP25
location: join(5721867..5721938,5723483..5723524,5730014..5730062,5737002..5737119,5740720..5740845,5743395..5743539,5748067..5748135)
location: region:5721867-5748135:1
so has part: feature:5721867-5721938:1:exon
so has part: feature:5723483-5723524:1:exon
so has part: feature:5730014-5730062:1:exon
so has part: feature:5737002-5737119:1:exon
so has part: feature:5740720-5740845:1:exon
so has part: feature:5743395-5743539:1:exon
so has part: feature:5748067-5748135:1:exon

XP_004593413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5721867-5721938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5723483-5723524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5730014-5730062:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5737002-5737119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5740720-5740845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5743395-5743539:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5748067-5748135:1:exon

MKKS
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: MKKS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5819444..5827651)
location: region:5819444-5827651:-1
so has part: feature:5819444-5827651:-1:exon
subclass of: SO_0000010

101526262
type: Gene
SIO_000068: ncbigene

position:5819444:-1
position: 5819444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5827651:-1
position: 5827651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5819444-5827651:-1:exon

MKKS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MKKS
product: McKusick-Kaufman syndrome, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012929293.1
SIO_010081: MKKS
subclass of: SO_0000673
so part of: MKKS
location: complement(join(5819444..5820198,5822235..5822345,5823547..5823722,5826667..5826742,5826941..5827651))
location: region:5819444-5827651:-1
so has part: feature:5826941-5827651:-1:exon
so has part: feature:5826667-5826742:-1:exon
so has part: feature:5823547-5823722:-1:exon
so has part: feature:5822235-5822345:-1:exon
so has part: feature:5819444-5820198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5826941-5827651:-1:exon

position:5826941:-1
position: 5826941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5826667-5826742:-1:exon

position:5826667:-1
position: 5826667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5826742:-1
position: 5826742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5823547-5823722:-1:exon

position:5823547:-1
position: 5823547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5823722:-1
position: 5823722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5822235-5822345:-1:exon

position:5822235:-1
position: 5822235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5822345:-1
position: 5822345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5819444-5820198:-1:exon

position:5820198:-1
position: 5820198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MKKS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MKKS
product: McKusick-Kaufman syndrome, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004593358.2
SIO_010081: MKKS
subclass of: SO_0000673
so part of: MKKS
location: complement(join(5819444..5820198,5822235..5822345,5823547..5823722,5826667..5827651))
location: region:5819444-5827651:-1
so has part: feature:5826667-5827651:-1:exon
so has part: feature:5823547-5823722:-1:exon
so has part: feature:5822235-5822345:-1:exon
so has part: feature:5819444-5820198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5826667-5827651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5823547-5823722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5822235-5822345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5819444-5820198:-1:exon

MKKS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MKKS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin isoform X2
translation: MSRLEAKKPSLCTGEPLTHEQVRATLSVLKGITASCYGPSGRLKQVHNGRGGYVCTSSQSSALLGHLAVTHPLLKILTAAVQSQAACFGDCGLFTAILSCSLIESDQRLGLSPATVVKVNKCLLSLCTNYLRSEACRCRIPVDFSRSHILLCLVRTVLTSKPACMLTRKEIEHISAVILRAFLLTIPETAEDHLVLGKAIIVPLKGHSVMDSLVLPGILIEMSEVQFRRILPFKKSSLLSSHRIIVIDRVGVTLMEPLRKVTGTQPIGSLGHVTPKSYGSVKTVCPARFGSKHFFHLLPDEATVCSLLLGNRNDSAWDELKLTCHSALNVLQLTLKEPWVLLGGGCTETHLAAYIRHRVHNEAADILSDEGVTRTELELVAEAFCRALEALASSLEHDGGGTLTDTRHGHCWSIQADPPSGVGWADLLSRCGCGLFSSQEGLSWASLGSACPPSAPHTCLPPTAPDSASSLAVDCLTAKLGGLQVAVETANLILDLSYVIEDQN
SIO_010081: MKKS
subclass of: SO_0000673
so part of: MKKS
location: complement(join(5819758..5820198,5822235..5822345,5823547..5823722,5826667..5826742,5826941..5827651))
location: region:5819758-5827651:-1
so has part: feature:5826941-5827651:-1:exon
so has part: feature:5826667-5826742:-1:exon
so has part: feature:5823547-5823722:-1:exon
so has part: feature:5822235-5822345:-1:exon
so has part: feature:5819758-5820198:-1:exon

XP_012784747.1
type: Protein
SIO_000068: ncbiprotein

position:5819758:-1
position: 5819758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5826941-5827651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5826667-5826742:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5823547-5823722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5822235-5822345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5819758-5820198:-1:exon

MKKS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MKKS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin isoform X1
translation: MSRLEAKKPSLCTGEPLTHEQVRATLSVLKGITASCYGPSGRLKQVHNGRGGYVCTSSQSSALLGHLAVTHPLLKILTAAVQSQAACFGDCGLFTAILSCSLIESDQRLGLSPATVVKVNKCLLSLCTNYLRSEACRCRIPVDFSRSHILLCLVRTVLTSKPACMLTRKEIEHISAVILRAFLLTIPETAEDHLVLGKAIIVPLKGHSVMDSLVLPGILIEMSEVQFRRILPFKKSSVLKVALFGMSLSGDFCDTGEGTVTVSQGVSLEKAVLDQLLRLGRQLVGDHVDLVLCQKVVHPSLKQLLSSHRIIVIDRVGVTLMEPLRKVTGTQPIGSLGHVTPKSYGSVKTVCPARFGSKHFFHLLPDEATVCSLLLGNRNDSAWDELKLTCHSALNVLQLTLKEPWVLLGGGCTETHLAAYIRHRVHNEAADILSDEGVTRTELELVAEAFCRALEALASSLEHDGGGTLTDTRHGHCWSIQADPPSGVGWADLLSRCGCGLFSSQEGLSWASLGSACPPSAPHTCLPPTAPDSASSLAVDCLTAKLGGLQVAVETANLILDLSYVIEDQN
SIO_010081: MKKS
subclass of: SO_0000673
so part of: MKKS
location: complement(join(5819758..5820198,5822235..5822345,5823547..5823722,5826667..5827651))
location: region:5819758-5827651:-1
so has part: feature:5826667-5827651:-1:exon
so has part: feature:5823547-5823722:-1:exon
so has part: feature:5822235-5822345:-1:exon
so has part: feature:5819758-5820198:-1:exon

XP_004593415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5826667-5827651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5823547-5823722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5822235-5822345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5819758-5820198:-1:exon

LOC101518011
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101518011
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5944191..6013804
location: region:5944191-6013804:1
so has part: feature:5944191-6013804:1:exon
subclass of: SO_0000010

101518011
type: Gene
SIO_000068: ncbigene

position:5944191:1
position: 5944191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6013804:1
position: 6013804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5944191-6013804:1:exon

LOC101518011
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101518011
product: SLX4 interacting protein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_036497176.1
SIO_010081: LOC101518011
subclass of: SO_0000673
so part of: LOC101518011
location: join(5944191..5944322,5947882..5948002,5992518..5992595,5995904..5995992,6011794..6011907,6013222..6013804)
location: region:5944191-6013804:1
so has part: feature:5944191-5944322:1:exon
so has part: feature:5947882-5948002:1:exon
so has part: feature:5992518-5992595:1:exon
so has part: feature:5995904-5995992:1:exon
so has part: feature:6011794-6011907:1:exon
so has part: feature:6013222-6013804:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5944191-5944322:1:exon

position:5944322:1
position: 5944322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5947882-5948002:1:exon

position:5947882:1
position: 5947882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5948002:1
position: 5948002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5992518-5992595:1:exon

position:5992518:1
position: 5992518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5992595:1
position: 5992595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5995904-5995992:1:exon

position:5995904:1
position: 5995904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5995992:1
position: 5995992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6011794-6011907:1:exon

position:6011794:1
position: 6011794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6011907:1
position: 6011907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6013222-6013804:1:exon

position:6013222:1
position: 6013222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101518011
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101518011
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:6013706..6013708,aa:OTHER)
product: LOW QUALITY PROTEIN: protein SLX4IP
translation: MSCTDTDAATDVFQCGNFAVLVDLHVSPQDSSKDTSWFSEHKKEEVCLLLKETIDSRIKEYLEVRKQHKPSSTEFTRSNPLSLKGYGFQITAYFLKRGIRLRCIRGSPNSDLRVFPDRFVVCVSQLPVDCDLLLSQKEELTAWALSGVSDYSAECAEXSPLPPSAKLQRNALEETQGQSSRTRGGEASSSPTKDYIKAAECHWGMPVQRQENVDSSQPEDTSSQQKKKKKTSTWERSEPGLLSRXPVYGCDSASLSRIQEKCRDCCSVGVSHHDRXDQLVPRETIVGECEAVGVLPTSGLSDSGFFLKSVLVKTTXKEDINVLENLSSRHLMKNNPRQALXSDSATNIERLSARQGQPNREKKNCKVFQGTS
SIO_010081: LOC101518011
subclass of: SO_0000673
so part of: LOC101518011
location: join(5944191..5944322,5947882..5948002,5992518..5992595,5995904..5995992,6011794..6011907,6013222..6013804)
location: region:5944191-6013804:1
so has part: feature:5944191-5944322:1:exon
so has part: feature:5947882-5948002:1:exon
so has part: feature:5992518-5992595:1:exon
so has part: feature:5995904-5995992:1:exon
so has part: feature:6011794-6011907:1:exon
so has part: feature:6013222-6013804:1:exon

XP_036353069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5944191-5944322:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5947882-5948002:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5992518-5992595:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5995904-5995992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6011794-6011907:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6013222-6013804:1:exon

JAG1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: JAG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6046236..6078456)
location: region:6046236-6078456:-1
so has part: feature:6046236-6078456:-1:exon
subclass of: SO_0000010

101526503
type: Gene
SIO_000068: ncbigene

position:6046236:-1
position: 6046236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6078456:-1
position: 6078456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6046236-6078456:-1:exon

JAG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: JAG1
product: jagged canonical Notch ligand 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins
transcript id: XM_004593359.3
SIO_010081: JAG1
subclass of: SO_0000673
so part of: JAG1
location: complement(join(6046236..6046716,6047612..6047762,6047975..6048106,6048304..6048537,6048631..6048740,6049212..6049325,6050245..6050330,6050813..6050840,6051350..6051466,6051639..6051752,6051839..6051952,6052396..6052509,6052943..6053107,6054123..6054273,6054702..6054875,6055130..6055176,6055589..6055702,6056304..6056417,6057354..6057467,6057829..6057948,6058166..6058296,6062425..6062485,6064164..6064418,6069665..6069716,6078110..6078456))
location: region:6046236-6078456:-1
so has part: feature:6078110-6078456:-1:exon
so has part: feature:6069665-6069716:-1:exon
so has part: feature:6064164-6064418:-1:exon
so has part: feature:6062425-6062485:-1:exon
so has part: feature:6058166-6058296:-1:exon
so has part: feature:6057829-6057948:-1:exon
so has part: feature:6057354-6057467:-1:exon
so has part: feature:6056304-6056417:-1:exon
so has part: feature:6055589-6055702:-1:exon
so has part: feature:6055130-6055176:-1:exon
so has part: feature:6054702-6054875:-1:exon
so has part: feature:6054123-6054273:-1:exon
so has part: feature:6052943-6053107:-1:exon
so has part: feature:6052396-6052509:-1:exon
so has part: feature:6051839-6051952:-1:exon
so has part: feature:6051639-6051752:-1:exon
so has part: feature:6051350-6051466:-1:exon
so has part: feature:6050813-6050840:-1:exon
so has part: feature:6050245-6050330:-1:exon
so has part: feature:6049212-6049325:-1:exon
so has part: feature:6048631-6048740:-1:exon
so has part: feature:6048304-6048537:-1:exon
so has part: feature:6047975-6048106:-1:exon
so has part: feature:6047612-6047762:-1:exon
so has part: feature:6046236-6046716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6078110-6078456:-1:exon

position:6078110:-1
position: 6078110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6069665-6069716:-1:exon

position:6069665:-1
position: 6069665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6069716:-1
position: 6069716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6064164-6064418:-1:exon

position:6064164:-1
position: 6064164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6064418:-1
position: 6064418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6062425-6062485:-1:exon

position:6062425:-1
position: 6062425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6062485:-1
position: 6062485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6058166-6058296:-1:exon

position:6058166:-1
position: 6058166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6058296:-1
position: 6058296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6057829-6057948:-1:exon

position:6057829:-1
position: 6057829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6057948:-1
position: 6057948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6057354-6057467:-1:exon

position:6057354:-1
position: 6057354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6057467:-1
position: 6057467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6056304-6056417:-1:exon

position:6056304:-1
position: 6056304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6056417:-1
position: 6056417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6055589-6055702:-1:exon

position:6055589:-1
position: 6055589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6055702:-1
position: 6055702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6055130-6055176:-1:exon

position:6055130:-1
position: 6055130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6055176:-1
position: 6055176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6054702-6054875:-1:exon

position:6054702:-1
position: 6054702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6054875:-1
position: 6054875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6054123-6054273:-1:exon

position:6054123:-1
position: 6054123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6054273:-1
position: 6054273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6052943-6053107:-1:exon

position:6052943:-1
position: 6052943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6053107:-1
position: 6053107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6052396-6052509:-1:exon

position:6052396:-1
position: 6052396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6052509:-1
position: 6052509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6051839-6051952:-1:exon

position:6051839:-1
position: 6051839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6051952:-1
position: 6051952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6051639-6051752:-1:exon

position:6051639:-1
position: 6051639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6051752:-1
position: 6051752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6051350-6051466:-1:exon

position:6051350:-1
position: 6051350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6051466:-1
position: 6051466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6050813-6050840:-1:exon

position:6050813:-1
position: 6050813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6050840:-1
position: 6050840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6050245-6050330:-1:exon

position:6050245:-1
position: 6050245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6050330:-1
position: 6050330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6049212-6049325:-1:exon

position:6049212:-1
position: 6049212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6049325:-1
position: 6049325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6048631-6048740:-1:exon

position:6048631:-1
position: 6048631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6048740:-1
position: 6048740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6048304-6048537:-1:exon

position:6048304:-1
position: 6048304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6048537:-1
position: 6048537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6047975-6048106:-1:exon

position:6047975:-1
position: 6047975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6048106:-1
position: 6048106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6047612-6047762:-1:exon

position:6047612:-1
position: 6047612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6047762:-1
position: 6047762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6046236-6046716:-1:exon

position:6046716:-1
position: 6046716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

JAG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: JAG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein jagged-1
translation: MQNVNGELQNGNCCGGSRNPGDRKCTRDECDTYFKVCLKEYQSRVTAGGPCSFGSGSTPVIGGNTFNLKASRGNDRNRIVLPFSFAWPRSYTLLVEAWDSSNDTVQPDSIIEKASHSGMINPSRQWQTLKQNTGVAHFEYQIRVTCDDYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPECNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCDKCIPHPGCVHGTCNEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEIAEHACLSDPCHNRGSCRETALGFECECAPGWTGPTCSTNIDDCSPNNCSHGGTCLDLVNGFKCVCPPQWTGKTCQLDANECEAKPCVNAKSCKNLIASYYCDCLPGWMGQNCDININDCLGQCQNDAACRDLVNGYRCICPPGYAGTHCERDIDECASNPCLNGGHCQDEINRFQCLCPTGFSGSLCQLDIDYCEPNPCQNGAQCYNRASDYFCKCPEDYEGKNCSHLKDHCRTTPCEVIDSCTVAMASNDTPEGVRYISSNVCGPHGKCKSQSGGKFTCDCNKGFTGTYCHENINDCESNPCKNGGTCIDGVNSYKCICSDGWEGTHCEANINDCSQNPCHNGGTCRDLVNDFYCDCKNGWKGKTCHSRDSQCDEATCNNGGTCYDEGDAFKCMCPGGWEGATCNIARNSSCLPNPCHNGGTCVVNGESFSCVCKEGWEGPTCTQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCAFGATCVDEINGYRCVCPPGHSGAKCQEVSGRPCITMGSMIPDGAKWDDDCNTCQCLNGRIACSKVWCGPRPCLLHKGHSECPSGQSCIPILDDQCFVRPCTGVGECRSSGLQPVKTKCTSDSYYQDNCANITFTFNKEMMSPGLTTEHICSELRNLNILKNVSAEYSIYIACEPSPLANNEIHVAISAEDIRDDGNPIKEITDKIIDLVSKRDGNSSLIAAVAEVRVQRRPQKNTTDFLVPLLSSVLTVAWVCCLVTAFYWCVRKRRKPSSHTRSASEDNTTNNVREQLNQIKNPIEKHGANTVPVKDYESKNSKMSKIRTHNSEVEEDDMDKHQQKARFAKQPAYTLVDRDEKPPNGTPTKHPNWTNKQDNRDLESAQSLNRMEYIV
SIO_010081: JAG1
subclass of: SO_0000673
so part of: JAG1
location: complement(join(6046259..6046716,6047612..6047762,6047975..6048106,6048304..6048537,6048631..6048740,6049212..6049325,6050245..6050330,6050813..6050840,6051350..6051466,6051639..6051752,6051839..6051952,6052396..6052509,6052943..6053107,6054123..6054273,6054702..6054875,6055130..6055176,6055589..6055702,6056304..6056417,6057354..6057467,6057829..6057948,6058166..6058296,6062425..6062485,6064164..6064418,6069665..6069716,6078110..6078373))
location: region:6046259-6078373:-1
so has part: feature:6078110-6078373:-1:exon
so has part: feature:6069665-6069716:-1:exon
so has part: feature:6064164-6064418:-1:exon
so has part: feature:6062425-6062485:-1:exon
so has part: feature:6058166-6058296:-1:exon
so has part: feature:6057829-6057948:-1:exon
so has part: feature:6057354-6057467:-1:exon
so has part: feature:6056304-6056417:-1:exon
so has part: feature:6055589-6055702:-1:exon
so has part: feature:6055130-6055176:-1:exon
so has part: feature:6054702-6054875:-1:exon
so has part: feature:6054123-6054273:-1:exon
so has part: feature:6052943-6053107:-1:exon
so has part: feature:6052396-6052509:-1:exon
so has part: feature:6051839-6051952:-1:exon
so has part: feature:6051639-6051752:-1:exon
so has part: feature:6051350-6051466:-1:exon
so has part: feature:6050813-6050840:-1:exon
so has part: feature:6050245-6050330:-1:exon
so has part: feature:6049212-6049325:-1:exon
so has part: feature:6048631-6048740:-1:exon
so has part: feature:6048304-6048537:-1:exon
so has part: feature:6047975-6048106:-1:exon
so has part: feature:6047612-6047762:-1:exon
so has part: feature:6046259-6046716:-1:exon

XP_004593416.1
type: Protein
SIO_000068: ncbiprotein

position:6046259:-1
position: 6046259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6078373:-1
position: 6078373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6078110-6078373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6069665-6069716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6064164-6064418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6062425-6062485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6058166-6058296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6057829-6057948:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6057354-6057467:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6056304-6056417:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6055589-6055702:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6055130-6055176:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6054702-6054875:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6054123-6054273:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6052943-6053107:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6052396-6052509:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6051839-6051952:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6051639-6051752:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6051350-6051466:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6050813-6050840:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6050245-6050330:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6049212-6049325:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6048631-6048740:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6048304-6048537:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6047975-6048106:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6047612-6047762:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6046259-6046716:-1:exon

LOC105942258
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105942258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6678706..6739082
location: region:6678706-6739082:1
so has part: feature:6678706-6739082:1:exon
subclass of: SO_0000011

105942258
type: Gene
SIO_000068: ncbigene

position:6678706:1
position: 6678706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6739082:1
position: 6739082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6678706-6739082:1:exon

LOC105942258
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: lncRNA
gene: LOC105942258
product: uncharacterized LOC105942258
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001168390.1
SIO_010081: LOC105942258
subclass of: SO_0000673
so part of: LOC105942258
location: join(6678706..6678825,6710575..6710647,6738908..6739082)
location: region:6678706-6739082:1
so has part: feature:6678706-6678825:1:exon
so has part: feature:6710575-6710647:1:exon
so has part: feature:6738908-6739082:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6678706-6678825:1:exon

position:6678825:1
position: 6678825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6710575-6710647:1:exon

position:6710575:1
position: 6710575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6710647:1
position: 6710647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6738908-6739082:1:exon

position:6738908:1
position: 6738908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BTBD3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: BTBD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7140472..7146852
location: region:7140472-7146852:1
so has part: feature:7140472-7146852:1:exon
subclass of: SO_0000010

101526753
type: Gene
SIO_000068: ncbigene

position:7140472:1
position: 7140472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7146852:1
position: 7146852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7140472-7146852:1:exon

BTBD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: BTBD3
product: BTB domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 17 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593360.3
SIO_010081: BTBD3
subclass of: SO_0000673
so part of: BTBD3
location: join(7140472..7141120,7141608..7141698,7142270..7142388,7145151..7146852)
location: region:7140472-7146852:1
so has part: feature:7140472-7141120:1:exon
so has part: feature:7141608-7141698:1:exon
so has part: feature:7142270-7142388:1:exon
so has part: feature:7145151-7146852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7140472-7141120:1:exon

position:7141120:1
position: 7141120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7141608-7141698:1:exon

position:7141608:1
position: 7141608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7141698:1
position: 7141698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7142270-7142388:1:exon

position:7142270:1
position: 7142270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7142388:1
position: 7142388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7145151-7146852:1:exon

position:7145151:1
position: 7145151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BTBD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: BTBD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein 3 isoform X1
translation: MVDDKEKNMKCLTFFLMLPETVKSRSKKSSKKASSSGSSGGSSGSGGSSSGGSSTKLPPVCYEIITLKTKKKKKMAADIFPRKKPAGSSSTTVQQYHQQNLSNNNLIPAPNWQGLYPTIRERNAVMFNNDLMADVHFVVGPPGGTQRLPGHKYVLAVGSSVFHAMFYGELAEDKDEIRIPDVEPAAFLAMLKYIYCDEIDLAADTVLATLYAAKKYIVPHLARACVNFLETSLSAKNACVLLSQSCLFEEPDLTQRCWEVIDAQAELALKSEGFCDIDFQTLESILRRETLNAKEIVVFEAALNWAEVECQRQDLALSIENKRKVLGKALYLIRIPTMALDDFANGAAQSGVLTLNETNDIFLWYTAAKKPELQFVSKARKGLVPQRCHRFQSCAYRSNQWRYRGRCDSIQFAVDKRVFIAGFGLYGSSCGSAEYSAKIELKRQGVVLGQNLSKYFSDGSSNTFPVWFEYPVQIEPDTFYTASVILDGNELSYFGQEGMTEVQCGKVTVQFQCSSDSTNGTGVQGGQIPELIFYA
SIO_010081: BTBD3
subclass of: SO_0000673
so part of: BTBD3
location: join(7140756..7141120,7141608..7141698,7142270..7142388,7145151..7146183)
location: region:7140756-7146183:1
so has part: feature:7140756-7141120:1:exon
so has part: feature:7141608-7141698:1:exon
so has part: feature:7142270-7142388:1:exon
so has part: feature:7145151-7146183:1:exon

XP_004593417.1
type: Protein
SIO_000068: ncbiprotein

position:7140756:1
position: 7140756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7146183:1
position: 7146183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7140756-7141120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7141608-7141698:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7142270-7142388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7145151-7146183:1:exon

BTBD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: BTBD3
product: BTB domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012929291.1
SIO_010081: BTBD3
subclass of: SO_0000673
so part of: BTBD3
location: join(7141016..7141120,7142270..7142388,7145151..7146852)
location: region:7141016-7146852:1
so has part: feature:7141016-7141120:1:exon
so has part: feature:7142270-7142388:1:exon
so has part: feature:7145151-7146852:1:exon

position:7141016:1
position: 7141016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7141016-7141120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7142270-7142388:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7145151-7146852:1:exon

BTBD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: BTBD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein 3 isoform X2
translation: MFYGELAEDKDEIRIPDVEPAAFLAMLKYIYCDEIDLAADTVLATLYAAKKYIVPHLARACVNFLETSLSAKNACVLLSQSCLFEEPDLTQRCWEVIDAQAELALKSEGFCDIDFQTLESILRRETLNAKEIVVFEAALNWAEVECQRQDLALSIENKRKVLGKALYLIRIPTMALDDFANGAAQSGVLTLNETNDIFLWYTAAKKPELQFVSKARKGLVPQRCHRFQSCAYRSNQWRYRGRCDSIQFAVDKRVFIAGFGLYGSSCGSAEYSAKIELKRQGVVLGQNLSKYFSDGSSNTFPVWFEYPVQIEPDTFYTASVILDGNELSYFGQEGMTEVQCGKVTVQFQCSSDSTNGTGVQGGQIPELIFYA
SIO_010081: BTBD3
subclass of: SO_0000673
so part of: BTBD3
location: join(7142306..7142388,7145151..7146183)
location: region:7142306-7146183:1
so has part: feature:7142306-7142388:1:exon
so has part: feature:7145151-7146183:1:exon

XP_012784745.1
type: Protein
SIO_000068: ncbiprotein

position:7142306:1
position: 7142306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7142306-7142388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7145151-7146183:1:exon

SPTLC3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SPTLC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8106228..8235710
location: region:8106228-8235710:1
so has part: feature:8106228-8235710:1:exon
subclass of: SO_0000010

101518727
type: Gene
SIO_000068: ncbigene

position:8106228:1
position: 8106228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8235710:1
position: 8235710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8106228-8235710:1:exon

SPTLC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SPTLC3
product: serine palmitoyltransferase long chain base subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_012929281.1
SIO_010081: SPTLC3
subclass of: SO_0000673
so part of: SPTLC3
location: join(8106228..8106344,8144166..8144348,8157719..8157873,8158406..8158554,8176448..8176572,8177688..8177781,8190085..8190190,8196581..8196800,8204305..8204431,8224512..8224647,8232623..8232701,8235597..8235710)
location: region:8106228-8235710:1
so has part: feature:8106228-8106344:1:exon
so has part: feature:8144166-8144348:1:exon
so has part: feature:8157719-8157873:1:exon
so has part: feature:8158406-8158554:1:exon
so has part: feature:8176448-8176572:1:exon
so has part: feature:8177688-8177781:1:exon
so has part: feature:8190085-8190190:1:exon
so has part: feature:8196581-8196800:1:exon
so has part: feature:8204305-8204431:1:exon
so has part: feature:8224512-8224647:1:exon
so has part: feature:8232623-8232701:1:exon
so has part: feature:8235597-8235710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8106228-8106344:1:exon

position:8106344:1
position: 8106344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8144166-8144348:1:exon

position:8144166:1
position: 8144166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8144348:1
position: 8144348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8157719-8157873:1:exon

position:8157719:1
position: 8157719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8157873:1
position: 8157873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8158406-8158554:1:exon

position:8158406:1
position: 8158406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8158554:1
position: 8158554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8176448-8176572:1:exon

position:8176448:1
position: 8176448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8176572:1
position: 8176572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8177688-8177781:1:exon

position:8177688:1
position: 8177688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8177781:1
position: 8177781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8190085-8190190:1:exon

position:8190085:1
position: 8190085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8190190:1
position: 8190190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8196581-8196800:1:exon

position:8196581:1
position: 8196581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8196800:1
position: 8196800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8204305-8204431:1:exon

position:8204305:1
position: 8204305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8204431:1
position: 8204431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8224512-8224647:1:exon

position:8224512:1
position: 8224512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8224647:1
position: 8224647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8232623-8232701:1:exon

position:8232623:1
position: 8232623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8232701:1
position: 8232701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8235597-8235710:1:exon

position:8235597:1
position: 8235597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPTLC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SPTLC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine palmitoyltransferase 3
translation: MANPGGGAVANGTLHSCKSPGHGVLDGHCPKNGIVRTAEQNGKPHIHADMEESFEEAPLHVMVFTYMGYGIGTLFGYLRDFLRNWGIEKCNAAVEREEQKDFVPLYQDFQNFYTRNLYMRIRDNWNRPVCSAPGPHFDMMERVSDDYNWTFRFTGRVIKDVINMGSYNFLGLVSKYNNSMRTVKEVLERYGTGVASTRHEMGTLDKHKELEELVAKFLNVEAAMVFGMGFATNSMNIPVLVGKGCLILSDELNHTSVVLGARLSGAIIRPFKHNNMQNLEKLLRDAIIHGQPRTHRAWRKILILVEGIYSMEGSIVKLPQIVALKKKYKAYLYIDEAHSIGSVGATGRGVSEFYGVDPGDIDVLMGTFTKSFGAAGGYIAGKKDLVDYIRVHSHSAAYATSMSPTVAEQIIRSMKFIMGLDGTTQGVERVQQLTKNAKYFRQRLREMGFIIYGNDYSPVVPVLLYMPGKVAENQMLKLQEYTRPDVPQSSELWLELMVLEAVDEIGDLLQVKYSRHRTSPRPELCDELSFELND
SIO_010081: SPTLC3
subclass of: SO_0000673
so part of: SPTLC3
location: join(8106228..8106344,8144166..8144348,8157719..8157873,8158406..8158554,8176448..8176572,8177688..8177781,8190085..8190190,8196581..8196800,8204305..8204431,8224512..8224647,8232623..8232701,8235597..8235710)
location: region:8106228-8235710:1
so has part: feature:8106228-8106344:1:exon
so has part: feature:8144166-8144348:1:exon
so has part: feature:8157719-8157873:1:exon
so has part: feature:8158406-8158554:1:exon
so has part: feature:8176448-8176572:1:exon
so has part: feature:8177688-8177781:1:exon
so has part: feature:8190085-8190190:1:exon
so has part: feature:8196581-8196800:1:exon
so has part: feature:8204305-8204431:1:exon
so has part: feature:8224512-8224647:1:exon
so has part: feature:8232623-8232701:1:exon
so has part: feature:8235597-8235710:1:exon

XP_012784735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8106228-8106344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8144166-8144348:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8157719-8157873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8158406-8158554:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8176448-8176572:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8177688-8177781:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8190085-8190190:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8196581-8196800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8204305-8204431:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8224512-8224647:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8232623-8232701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8235597-8235710:1:exon

ISM1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ISM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8278079..8339146
location: region:8278079-8339146:1
so has part: feature:8278079-8339146:1:exon
subclass of: SO_0000010

101526999
type: Gene
SIO_000068: ncbigene

position:8278079:1
position: 8278079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8339146:1
position: 8339146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8278079-8339146:1:exon

ISM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ISM1
product: isthmin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins
transcript id: XM_004593361.1
SIO_010081: ISM1
subclass of: SO_0000673
so part of: ISM1
location: join(8278079..8278216,8315269..8315508,8324031..8324295,8332028..8332171,8335140..8335229,8338593..8339146)
location: region:8278079-8339146:1
so has part: feature:8278079-8278216:1:exon
so has part: feature:8315269-8315508:1:exon
so has part: feature:8324031-8324295:1:exon
so has part: feature:8332028-8332171:1:exon
so has part: feature:8335140-8335229:1:exon
so has part: feature:8338593-8339146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8278079-8278216:1:exon

position:8278216:1
position: 8278216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8315269-8315508:1:exon

position:8315269:1
position: 8315269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8315508:1
position: 8315508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8324031-8324295:1:exon

position:8324031:1
position: 8324031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8324295:1
position: 8324295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8332028-8332171:1:exon

position:8332028:1
position: 8332028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8332171:1
position: 8332171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8335140-8335229:1:exon

position:8335140:1
position: 8335140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8335229:1
position: 8335229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8338593-8339146:1:exon

position:8338593:1
position: 8338593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ISM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ISM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isthmin-1
translation: MVRLAAELLLLLGLLLLTLHITVLRGSGATDGPDAAAANASGAQLQNNLNMETDSTSETNFPFSKAAAGEQPDHQAAHQPFPRQRFHQENGHPSLQRDGPRSFLLDLPNFPDLSKADINGQNPNIQVTIEVVDGPDSEADKDQQPETKPSWSVPSPDWRAWWQRSLSLARANSGDQDYKYDSTSDDSNFLNPPRGWDRPAPGHRTFETKEQPEYDSTDGEGDWSLWSVCSVTCGNGNQKRTRSCGYACTATESRTCDRPNCPGIEDTFRTAATEVSLLAGSEEFNATKLFEVDTDSCERWMSCKSEFLKKYMHKVINDLPSCPCSYPTEVAYSTADIFDRIKRKDFRWKDASGPKEKLEIYKPTARYCIRSMLSLESTTLAAQHCCYGDNMQLITRGKGAGTPNLISTEFSAELHYKVDVLPWIICKGDWSRYNEARPPNNGQKCAESPSDEDYIKQFQEAREY
SIO_010081: ISM1
subclass of: SO_0000673
so part of: ISM1
location: join(8278079..8278216,8315269..8315508,8324031..8324295,8332028..8332171,8335140..8335229,8338593..8339110)
location: region:8278079-8339110:1
so has part: feature:8278079-8278216:1:exon
so has part: feature:8315269-8315508:1:exon
so has part: feature:8324031-8324295:1:exon
so has part: feature:8332028-8332171:1:exon
so has part: feature:8335140-8335229:1:exon
so has part: feature:8338593-8339110:1:exon

XP_004593418.1
type: Protein
SIO_000068: ncbiprotein

position:8339110:1
position: 8339110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8278079-8278216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8315269-8315508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8324031-8324295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8332028-8332171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8335140-8335229:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8338593-8339110:1:exon

TASP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TASP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8396661..8580496)
location: region:8396661-8580496:-1
so has part: feature:8396661-8580496:-1:exon
subclass of: SO_0000010

101527246
type: Gene
SIO_000068: ncbigene

position:8396661:-1
position: 8396661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8580496:-1
position: 8580496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8396661-8580496:-1:exon

TASP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TASP1
product: taspase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593362.3
SIO_010081: TASP1
subclass of: SO_0000673
so part of: TASP1
location: complement(join(8396661..8397639,8420477..8420550,8437616..8437726,8458831..8458941,8487330..8487408,8491849..8491968,8510779..8510885,8517179..8517258,8527892..8527976,8534875..8534995,8561219..8561287,8565478..8565545,8569597..8569815,8580475..8580496))
location: region:8396661-8580496:-1
so has part: feature:8580475-8580496:-1:exon
so has part: feature:8569597-8569815:-1:exon
so has part: feature:8565478-8565545:-1:exon
so has part: feature:8561219-8561287:-1:exon
so has part: feature:8534875-8534995:-1:exon
so has part: feature:8527892-8527976:-1:exon
so has part: feature:8517179-8517258:-1:exon
so has part: feature:8510779-8510885:-1:exon
so has part: feature:8491849-8491968:-1:exon
so has part: feature:8487330-8487408:-1:exon
so has part: feature:8458831-8458941:-1:exon
so has part: feature:8437616-8437726:-1:exon
so has part: feature:8420477-8420550:-1:exon
so has part: feature:8396661-8397639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8580475-8580496:-1:exon

position:8580475:-1
position: 8580475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8569597-8569815:-1:exon

position:8569597:-1
position: 8569597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8569815:-1
position: 8569815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8565478-8565545:-1:exon

position:8565478:-1
position: 8565478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8565545:-1
position: 8565545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8561219-8561287:-1:exon

position:8561219:-1
position: 8561219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8561287:-1
position: 8561287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8534875-8534995:-1:exon

position:8534875:-1
position: 8534875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8534995:-1
position: 8534995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8527892-8527976:-1:exon

position:8527892:-1
position: 8527892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8527976:-1
position: 8527976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8517179-8517258:-1:exon

position:8517179:-1
position: 8517179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8517258:-1
position: 8517258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8510779-8510885:-1:exon

position:8510779:-1
position: 8510779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8510885:-1
position: 8510885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8491849-8491968:-1:exon

position:8491849:-1
position: 8491849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8491968:-1
position: 8491968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8487330-8487408:-1:exon

position:8487330:-1
position: 8487330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8487408:-1
position: 8487408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8458831-8458941:-1:exon

position:8458831:-1
position: 8458831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8458941:-1
position: 8458941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8437616-8437726:-1:exon

position:8437616:-1
position: 8437616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8437726:-1
position: 8437726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8420477-8420550:-1:exon

position:8420477:-1
position: 8420477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8420550:-1
position: 8420550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8396661-8397639:-1:exon

position:8397639:-1
position: 8397639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TASP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TASP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: threonine aspartase 1
translation: MTMEKGMSSGEGLPSRSAQISAVEVTARDLEVKQPHADQRGGFVLVHAGAGYHSESKAKEYKHVCKRACQKAIEKLQAGALATDAVTAALVELEDSPFTNAGMGSNLNLLGEIECDASIMDGKSLNFGAVGALSGIKNPVSVANRLLCEGQKGKLSAGRIPPCFLVGEGAYRWAVDHGIPSCPPNIMTTRFSLAAFKRNKRKLELAERVETDFIQLKKRRQSSEKENDSGTLDTVGAVVVDHEGNVAAAVSSGGLALKHPGRVGQAALYGCGCWAENTGAHSPYSTAVSTSGCGEHLVRTILARECSHALQAEDAHQALLETMQNKFISSPFLASEDGVLGGVIVLRSGRCSAEADSSQNKQTLLVEFLWSHTTESMCVGYMSAQDGKAKTHISRLPPGAVAGQSVAIEGGVCRLESPVN
SIO_010081: TASP1
subclass of: SO_0000673
so part of: TASP1
location: complement(join(8397547..8397639,8420477..8420550,8437616..8437726,8458831..8458941,8487330..8487408,8491849..8491968,8510779..8510885,8517179..8517258,8527892..8527976,8534875..8534995,8561219..8561287,8565478..8565545,8569597..8569741))
location: region:8397547-8569741:-1
so has part: feature:8569597-8569741:-1:exon
so has part: feature:8565478-8565545:-1:exon
so has part: feature:8561219-8561287:-1:exon
so has part: feature:8534875-8534995:-1:exon
so has part: feature:8527892-8527976:-1:exon
so has part: feature:8517179-8517258:-1:exon
so has part: feature:8510779-8510885:-1:exon
so has part: feature:8491849-8491968:-1:exon
so has part: feature:8487330-8487408:-1:exon
so has part: feature:8458831-8458941:-1:exon
so has part: feature:8437616-8437726:-1:exon
so has part: feature:8420477-8420550:-1:exon
so has part: feature:8397547-8397639:-1:exon

XP_004593419.1
type: Protein
SIO_000068: ncbiprotein

position:8397547:-1
position: 8397547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8569741:-1
position: 8569741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8569597-8569741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8565478-8565545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8561219-8561287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8534875-8534995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8527892-8527976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8517179-8517258:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8510779-8510885:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8491849-8491968:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8487330-8487408:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8458831-8458941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8437616-8437726:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8420477-8420550:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8397547-8397639:-1:exon

ESF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8641383..8708517)
location: region:8641383-8708517:-1
so has part: feature:8641383-8708517:-1:exon
subclass of: SO_0000010

101518965
type: Gene
SIO_000068: ncbigene

position:8641383:-1
position: 8641383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8708517:-1
position: 8708517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8641383-8708517:-1:exon

ESF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ESF1
product: ESF1 nucleolar pre-rRNA processing protein homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593400.3
SIO_010081: ESF1
subclass of: SO_0000673
so part of: ESF1
location: complement(join(8641383..8641799,8643272..8643418,8644908..8644984,8655886..8655973,8671365..8671486,8687860..8688018,8693115..8693262,8696247..8696307,8697673..8697825,8699250..8699350,8701556..8701669,8702258..8702628,8703783..8703804,8706533..8707187,8708453..8708517))
location: region:8641383-8708517:-1
so has part: feature:8708453-8708517:-1:exon
so has part: feature:8706533-8707187:-1:exon
so has part: feature:8703783-8703804:-1:exon
so has part: feature:8702258-8702628:-1:exon
so has part: feature:8701556-8701669:-1:exon
so has part: feature:8699250-8699350:-1:exon
so has part: feature:8697673-8697825:-1:exon
so has part: feature:8696247-8696307:-1:exon
so has part: feature:8693115-8693262:-1:exon
so has part: feature:8687860-8688018:-1:exon
so has part: feature:8671365-8671486:-1:exon
so has part: feature:8655886-8655973:-1:exon
so has part: feature:8644908-8644984:-1:exon
so has part: feature:8643272-8643418:-1:exon
so has part: feature:8641383-8641799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8708453-8708517:-1:exon

position:8708453:-1
position: 8708453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8706533-8707187:-1:exon

position:8706533:-1
position: 8706533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8707187:-1
position: 8707187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8703783-8703804:-1:exon

position:8703783:-1
position: 8703783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8703804:-1
position: 8703804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8702258-8702628:-1:exon

position:8702258:-1
position: 8702258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8702628:-1
position: 8702628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8701556-8701669:-1:exon

position:8701556:-1
position: 8701556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8701669:-1
position: 8701669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8699250-8699350:-1:exon

position:8699250:-1
position: 8699250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8699350:-1
position: 8699350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8697673-8697825:-1:exon

position:8697673:-1
position: 8697673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8697825:-1
position: 8697825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8696247-8696307:-1:exon

position:8696247:-1
position: 8696247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8696307:-1
position: 8696307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8693115-8693262:-1:exon

position:8693115:-1
position: 8693115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8693262:-1
position: 8693262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8687860-8688018:-1:exon

position:8687860:-1
position: 8687860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8688018:-1
position: 8688018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8671365-8671486:-1:exon

position:8671365:-1
position: 8671365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8671486:-1
position: 8671486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8655886-8655973:-1:exon

position:8655886:-1
position: 8655886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8655973:-1
position: 8655973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8644908-8644984:-1:exon

position:8644908:-1
position: 8644908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8644984:-1
position: 8644984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8643272-8643418:-1:exon

position:8643272:-1
position: 8643272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8643418:-1
position: 8643418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8641383-8641799:-1:exon

position:8641799:-1
position: 8641799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ESF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ESF1 homolog
translation: MSAKQEIMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPIHHSTTEDLKRFYELSDSDSDLSDEESKVLSQEKKEKKKPLTKREKDSNNLVEKKKKETKKINPKVSATKDDNSEGIQKRKNAHNSKIDSKISSKKSSEDSVRKSTKEKKNIVQSSADFPGKGKLRCADSETTDMGKSVKIKGPKTKQERMKVVPRMMAKDSDCFENSTDSRKFDRDDLEEESESVSDMGSDESEDEVSDVRTSADDSEEEDEEEEEEEDSEEEDESDSGPDLARGKGNIETSSEDEDDWADLSPEEPTFEHAWRELDRDAPRADEITHRLAVCNMDWDRLKAKDLLALFNSFKPKGGVVFSVKIYPSEFGKERMKEEQVQGPVELLSIPEDAPEKDWTSREKLRDYQFKRLKYYYAVVDCDSPETASKIYEDCDGLEFESSCSFIDLRYQAFILTCFQVFVSCLEHSHVEITWDETDHERITMLNRKFKKEELLDMDFQAYLASSSEDEEETEEELQGDDGVSLEDAKTKKSQKDDEEQIAKYRQLLQGIQEKEKKGKENDMEMEIKWVPGLKESAEEMVRNKLEGKDKLTPWEQFLEKKKEKKRLKKKQKALAEEGSEDELPSDVDLNDPYFAEEVKKIGVKKKSVKSTKDGTSPEEETEMEKQKAEMALLVMDEEEDGKKHFNYDKIVEHQNLSKKKRKQLLKRKELVEDDFEVNVTDARFQAMYTSHLFNLDPSDPNFKKTKAMEKILEEKARQRELKEQELTLAIKQKENEREKESQKSSMDPALSMLIKSVKSKTEQFQARKKQKVK
SIO_010081: ESF1
subclass of: SO_0000673
so part of: ESF1
location: complement(join(8641506..8641799,8643272..8643418,8644908..8644984,8655886..8655973,8671365..8671486,8687860..8688018,8693115..8693262,8696247..8696307,8697673..8697825,8699250..8699350,8701556..8701669,8702258..8702628,8703783..8703804,8706533..8707144))
location: region:8641506-8707144:-1
so has part: feature:8706533-8707144:-1:exon
so has part: feature:8703783-8703804:-1:exon
so has part: feature:8702258-8702628:-1:exon
so has part: feature:8701556-8701669:-1:exon
so has part: feature:8699250-8699350:-1:exon
so has part: feature:8697673-8697825:-1:exon
so has part: feature:8696247-8696307:-1:exon
so has part: feature:8693115-8693262:-1:exon
so has part: feature:8687860-8688018:-1:exon
so has part: feature:8671365-8671486:-1:exon
so has part: feature:8655886-8655973:-1:exon
so has part: feature:8644908-8644984:-1:exon
so has part: feature:8643272-8643418:-1:exon
so has part: feature:8641506-8641799:-1:exon

XP_004593457.1
type: Protein
SIO_000068: ncbiprotein

position:8641506:-1
position: 8641506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8707144:-1
position: 8707144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8706533-8707144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8703783-8703804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8702258-8702628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8701556-8701669:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8699250-8699350:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8697673-8697825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8696247-8696307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8693115-8693262:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8687860-8688018:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8671365-8671486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8655886-8655973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8644908-8644984:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8643272-8643418:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8641506-8641799:-1:exon

NDUFAF5
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: NDUFAF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8710829..8741632
location: region:8710829-8741632:1
so has part: feature:8710829-8741632:1:exon
subclass of: SO_0000010

101519212
type: Gene
SIO_000068: ncbigene

position:8710829:1
position: 8710829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8741632:1
position: 8741632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8710829-8741632:1:exon

NDUFAF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: NDUFAF5
product: NADH:ubiquinone oxidoreductase complex assembly factor 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 52% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036497112.1
SIO_010081: NDUFAF5
subclass of: SO_0000673
so part of: NDUFAF5
location: join(8710829..8710869,8720010..8720073,8722597..8722644,8723654..8723757,8727331..8727370,8729110..8729285,8733655..8733715,8740501..8740584,8741262..8741344,8741521..8741632)
location: region:8710829-8741632:1
so has part: feature:8710829-8710869:1:exon
so has part: feature:8720010-8720073:1:exon
so has part: feature:8722597-8722644:1:exon
so has part: feature:8723654-8723757:1:exon
so has part: feature:8727331-8727370:1:exon
so has part: feature:8729110-8729285:1:exon
so has part: feature:8733655-8733715:1:exon
so has part: feature:8740501-8740584:1:exon
so has part: feature:8741262-8741344:1:exon
so has part: feature:8741521-8741632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8710829-8710869:1:exon

position:8710869:1
position: 8710869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8720010-8720073:1:exon

position:8720010:1
position: 8720010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8720073:1
position: 8720073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8722597-8722644:1:exon

position:8722597:1
position: 8722597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8722644:1
position: 8722644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8723654-8723757:1:exon

position:8723654:1
position: 8723654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8723757:1
position: 8723757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8727331-8727370:1:exon

position:8727331:1
position: 8727331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8727370:1
position: 8727370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8729110-8729285:1:exon

position:8729110:1
position: 8729110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8729285:1
position: 8729285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8733655-8733715:1:exon

position:8733655:1
position: 8733655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8733715:1
position: 8733715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8740501-8740584:1:exon

position:8740501:1
position: 8740501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8740584:1
position: 8740584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8741262-8741344:1:exon

position:8741262:1
position: 8741262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8741344:1
position: 8741344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8741521-8741632:1:exon

position:8741521:1
position: 8741521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NDUFAF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: NDUFAF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine-hydroxylase NDUFAF5, mitochondrial
translation: MFGGDTLYELRCSLQLAETEREGGFSPHVSPFTAVNDLGHLLGRAGFNTLTVDTDEIQVNYPGMFELMEDLQGMGESNCSWNRKALLHRDTMLAAAAVYREMYGNEDGSVPATYQIYYMIGWKYHESQARPAERGSATVSFGELGKINHLMSQEKKPQ
SIO_010081: NDUFAF5
subclass of: SO_0000673
so part of: NDUFAF5
location: join(8729130..8729285,8733655..8733715,8740501..8740584,8741262..8741344,8741521..8741613)
location: region:8729130-8741613:1
so has part: feature:8729130-8729285:1:exon
so has part: feature:8733655-8733715:1:exon
so has part: feature:8740501-8740584:1:exon
so has part: feature:8741262-8741344:1:exon
so has part: feature:8741521-8741613:1:exon

XP_036353005.1
type: Protein
SIO_000068: ncbiprotein

position:8729130:1
position: 8729130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8741613:1
position: 8741613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8729130-8729285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8733655-8733715:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8740501-8740584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8741262-8741344:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8741521-8741613:1:exon

SEL1L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SEL1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8776809..8833610)
location: region:8776809-8833610:-1
so has part: feature:8776809-8833610:-1:exon
subclass of: SO_0000010

101527834
type: Gene
SIO_000068: ncbigene

position:8776809:-1
position: 8776809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8833610:-1
position: 8833610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8776809-8833610:-1:exon

SEL1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SEL1L2
product: SEL1L2 adaptor subunit of ERAD E3 ligase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593365.2
SIO_010081: SEL1L2
subclass of: SO_0000673
so part of: SEL1L2
location: complement(join(8776809..8777008,8777600..8777728,8792051..8792223,8797536..8797610,8797718..8797883,8799063..8799211,8802373..8802460,8803021..8803083,8813291..8813368,8814573..8814641,8819897..8819953,8820569..8820723,8821706..8821787,8821878..8821937,8822366..8822419,8833448..8833610))
location: region:8776809-8833610:-1
so has part: feature:8833448-8833610:-1:exon
so has part: feature:8822366-8822419:-1:exon
so has part: feature:8821878-8821937:-1:exon
so has part: feature:8821706-8821787:-1:exon
so has part: feature:8820569-8820723:-1:exon
so has part: feature:8819897-8819953:-1:exon
so has part: feature:8814573-8814641:-1:exon
so has part: feature:8813291-8813368:-1:exon
so has part: feature:8803021-8803083:-1:exon
so has part: feature:8802373-8802460:-1:exon
so has part: feature:8799063-8799211:-1:exon
so has part: feature:8797718-8797883:-1:exon
so has part: feature:8797536-8797610:-1:exon
so has part: feature:8792051-8792223:-1:exon
so has part: feature:8777600-8777728:-1:exon
so has part: feature:8776809-8777008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8833448-8833610:-1:exon

position:8833448:-1
position: 8833448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8822366-8822419:-1:exon

position:8822366:-1
position: 8822366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8822419:-1
position: 8822419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8821878-8821937:-1:exon

position:8821878:-1
position: 8821878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8821937:-1
position: 8821937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8821706-8821787:-1:exon

position:8821706:-1
position: 8821706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8821787:-1
position: 8821787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8820569-8820723:-1:exon

position:8820569:-1
position: 8820569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8820723:-1
position: 8820723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8819897-8819953:-1:exon

position:8819897:-1
position: 8819897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8819953:-1
position: 8819953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8814573-8814641:-1:exon

position:8814573:-1
position: 8814573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8814641:-1
position: 8814641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8813291-8813368:-1:exon

position:8813291:-1
position: 8813291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8813368:-1
position: 8813368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8803021-8803083:-1:exon

position:8803021:-1
position: 8803021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8803083:-1
position: 8803083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8802373-8802460:-1:exon

position:8802373:-1
position: 8802373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8802460:-1
position: 8802460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8799063-8799211:-1:exon

position:8799063:-1
position: 8799063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8799211:-1
position: 8799211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8797718-8797883:-1:exon

position:8797718:-1
position: 8797718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8797883:-1
position: 8797883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8797536-8797610:-1:exon

position:8797536:-1
position: 8797536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8797610:-1
position: 8797610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8792051-8792223:-1:exon

position:8792051:-1
position: 8792051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8792223:-1
position: 8792223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8777600-8777728:-1:exon

position:8777600:-1
position: 8777600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8777728:-1
position: 8777728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8776809-8777008:-1:exon

position:8777008:-1
position: 8777008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SEL1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SEL1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein sel-1 homolog 2
translation: MGNLKAMEKMADALLFGNFGMQNITAAIQLYESLAKEGSCKAQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGSLMSQMILGYRYLSGINVLQNCEVALNHYKIVADYIADKLEKNEGIPVEKVRLTERPENLSSNSEILDWDIYQYYKLLAERGDVQIQLHLGQLHLIGRKGLDQDYYKALYYFLKAAKAGSANAMALIGKMYLEGNVAAPQNNATAFKYFSMAASKGNAIGLHGLGLLYFYGKGVPVNYAEALKYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLAYKYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCELGHWAEKFLTAYFAYKDGDIDSSLIQYALLAEMGYEVAQSNSAFILESKKAKILEKEKMYPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKQDYQTAATHYSIAADKYHSAQAMFNLAYMYEHGLGITKDIHLARRLYDMAAETSPDAHIPVFFALIKLETVHFLQDVLFLNFTMKWKWMKLDNTLGPYWDFFVIGIIIAMLIFLLRNHHQ
SIO_010081: SEL1L2
subclass of: SO_0000673
so part of: SEL1L2
location: complement(join(8776889..8777008,8777600..8777728,8792051..8792223,8797536..8797610,8797718..8797883,8799063..8799211,8802373..8802460,8803021..8803083,8813291..8813368,8814573..8814641,8819897..8819953,8820569..8820723,8821706..8821787,8821878..8821937,8822366..8822419,8833448..8833579))
location: region:8776889-8833579:-1
so has part: feature:8833448-8833579:-1:exon
so has part: feature:8822366-8822419:-1:exon
so has part: feature:8821878-8821937:-1:exon
so has part: feature:8821706-8821787:-1:exon
so has part: feature:8820569-8820723:-1:exon
so has part: feature:8819897-8819953:-1:exon
so has part: feature:8814573-8814641:-1:exon
so has part: feature:8813291-8813368:-1:exon
so has part: feature:8803021-8803083:-1:exon
so has part: feature:8802373-8802460:-1:exon
so has part: feature:8799063-8799211:-1:exon
so has part: feature:8797718-8797883:-1:exon
so has part: feature:8797536-8797610:-1:exon
so has part: feature:8792051-8792223:-1:exon
so has part: feature:8777600-8777728:-1:exon
so has part: feature:8776889-8777008:-1:exon

XP_004593422.1
type: Protein
SIO_000068: ncbiprotein

position:8776889:-1
position: 8776889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8833579:-1
position: 8833579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8833448-8833579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8822366-8822419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8821878-8821937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8821706-8821787:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8820569-8820723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8819897-8819953:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8814573-8814641:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8813291-8813368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8803021-8803083:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8802373-8802460:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8799063-8799211:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8797718-8797883:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8797536-8797610:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8792051-8792223:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8777600-8777728:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8776889-8777008:-1:exon

LOC118760205
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118760205
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 9265085..9265144
location: region:9265085-9265144:1
so has part: feature:9265085-9265144:1:exon

118760205
type: Gene
SIO_000068: ncbigene

position:9265085:1
position: 9265085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9265144:1
position: 9265144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9265085-9265144:1:exon

LOC118760205
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118760205
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118760205
subclass of: SO_0000673
so part of: LOC118760205
location: 9265085..9265144
location: region:9265085-9265144:1
so has part: feature:9265085-9265144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9265085-9265144:1:exon

SYNDIG1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SYNDIG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9410810..9506306
location: region:9410810-9506306:1
so has part: feature:9410810-9506306:1:exon
subclass of: SO_0000010

101516937
type: Gene
SIO_000068: ncbigene

position:9410810:1
position: 9410810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9506306:1
position: 9506306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9410810-9506306:1:exon

SYNDIG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SYNDIG1
product: synapse differentiation inducing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins
transcript id: XM_004593318.1
SIO_010081: SYNDIG1
subclass of: SO_0000673
so part of: SYNDIG1
location: join(9410810..9411289,9438159..9438296,9506148..9506306)
location: region:9410810-9506306:1
so has part: feature:9410810-9411289:1:exon
so has part: feature:9438159-9438296:1:exon
so has part: feature:9506148-9506306:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9410810-9411289:1:exon

position:9411289:1
position: 9411289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9438159-9438296:1:exon

position:9438159:1
position: 9438159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9438296:1
position: 9438296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9506148-9506306:1:exon

position:9506148:1
position: 9506148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYNDIG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SYNDIG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synapse differentiation-inducing gene protein 1
translation: MDSILNQKGVLVHGKLTDAGKRNGLINTRNFMAEGRDGLVSVYPAPQYQSRQGVASVASASLDGSRNEPSQQLLNPNTLQQSVESHYHPNIILYSEGVLRSWGDGVAADCCETTFIEDRSPTKDSLDYPDTKFINLSADDIKIHTLSYEVEEEEEFQELESDYSSDTESEDNFLMMPPRDHLGLSVFSMLCCFWPLGIAAFYLSHETNKAMAKGDFHQASTSSRRALFLAVLSITIGTGIYVGVAVALIAYLSKSNHL
SIO_010081: SYNDIG1
subclass of: SO_0000673
so part of: SYNDIG1
location: join(9410810..9411289,9438159..9438296,9506148..9506306)
location: region:9410810-9506306:1
so has part: feature:9410810-9411289:1:exon
so has part: feature:9438159-9438296:1:exon
so has part: feature:9506148-9506306:1:exon

XP_004593375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9410810-9411289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9438159-9438296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9506148-9506306:1:exon

CST7
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CST7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9675741..9680639
location: region:9675741-9680639:1
so has part: feature:9675741-9680639:1:exon
subclass of: SO_0000010

101530801
type: Gene
SIO_000068: ncbigene

position:9675741:1
position: 9675741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9680639:1
position: 9680639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9675741-9680639:1:exon

CST7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CST7
product: cystatin F
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_004593368.1
SIO_010081: CST7
subclass of: SO_0000673
so part of: CST7
location: join(9675741..9675810,9678447..9678619,9680244..9680360,9680562..9680639)
location: region:9675741-9680639:1
so has part: feature:9675741-9675810:1:exon
so has part: feature:9678447-9678619:1:exon
so has part: feature:9680244-9680360:1:exon
so has part: feature:9680562-9680639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9675741-9675810:1:exon

position:9675810:1
position: 9675810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9678447-9678619:1:exon

position:9678447:1
position: 9678447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9678619:1
position: 9678619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9680244-9680360:1:exon

position:9680244:1
position: 9680244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9680360:1
position: 9680360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9680562-9680639:1:exon

position:9680562:1
position: 9680562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CST7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CST7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cystatin-F
translation: MWLAGALLAISCLMVHTTAAPFPVFCSQDRDSDVRPGFPESIKTDDPGALAAARHSVERFNNCTNDIFLFKVSHISRALVQIVKGLKYMLEVEFSRTICRKTSHARLDDCDFQTNHTLEKTLRCYAEVWVVPWLQTVEVPVLYCH
SIO_010081: CST7
subclass of: SO_0000673
so part of: CST7
location: join(9675741..9675810,9678447..9678619,9680244..9680360,9680562..9680639)
location: region:9675741-9680639:1
so has part: feature:9675741-9675810:1:exon
so has part: feature:9678447-9678619:1:exon
so has part: feature:9680244-9680360:1:exon
so has part: feature:9680562-9680639:1:exon

XP_004593425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9675741-9675810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9678447-9678619:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9680244-9680360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9680562-9680639:1:exon

LOC101531039
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101531039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9684766..9731628)
location: region:9684766-9731628:-1
so has part: feature:9684766-9731628:-1:exon
subclass of: SO_0000010

101531039
type: Gene
SIO_000068: ncbigene

position:9684766:-1
position: 9684766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9731628:-1
position: 9731628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9684766-9731628:-1:exon

LOC101531039
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101531039
product: adipocyte plasma membrane associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593369.2
SIO_010081: LOC101531039
subclass of: SO_0000673
so part of: LOC101531039
location: complement(join(9684766..9685023,9689117..9689309,9689899..9690033,9691784..9691958,9694546..9694662,9695701..9695793,9711702..9711817,9714423..9714539,9731535..9731628))
location: region:9684766-9731628:-1
so has part: feature:9731535-9731628:-1:exon
so has part: feature:9714423-9714539:-1:exon
so has part: feature:9711702-9711817:-1:exon
so has part: feature:9695701-9695793:-1:exon
so has part: feature:9694546-9694662:-1:exon
so has part: feature:9691784-9691958:-1:exon
so has part: feature:9689899-9690033:-1:exon
so has part: feature:9689117-9689309:-1:exon
so has part: feature:9684766-9685023:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9731535-9731628:-1:exon

position:9731535:-1
position: 9731535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9714423-9714539:-1:exon

position:9714423:-1
position: 9714423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9714539:-1
position: 9714539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9711702-9711817:-1:exon

position:9711702:-1
position: 9711702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9711817:-1
position: 9711817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9695701-9695793:-1:exon

position:9695701:-1
position: 9695701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9695793:-1
position: 9695793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9694546-9694662:-1:exon

position:9694546:-1
position: 9694546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9694662:-1
position: 9694662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9691784-9691958:-1:exon

position:9691784:-1
position: 9691784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9691958:-1
position: 9691958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9689899-9690033:-1:exon

position:9689899:-1
position: 9689899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9690033:-1
position: 9690033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9689117-9689309:-1:exon

position:9689117:-1
position: 9689117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9689309:-1
position: 9689309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9684766-9685023:-1:exon

position:9685023:-1
position: 9685023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101531039
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101531039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adipocyte plasma membrane-associated protein
translation: MGEADGLRQRRPLRPQVVTDEGQAPEAKDGSSFSGRVFRVTFLMLAASLTVPLLGAMMLLKSPIEPQPLSFKEPPFFLGVLQPNTKLRQAERLFENQLIGPESIANIGDVMFTGTADGRVVKLENGEIQTIARFGSGPCKTRDDEPACGRPLGIRAGPNGTLFVADAYKGLFEVNPWKREVKLLLSSEVPIEGKKLSFINDLAVTRDGRKIYFTDSSSKWQRRDYLLLVMEGTEDGRLLEYDTVTKEVRVLLDQLSFPNGVQLSPAEDFVLVAETTMARIRRVYVSGLMKGGAELFVENMPGFPDNIRPSSTGGYWVAMSSIRPNPGFSMLDFLAERPYIKRMIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDGLVATYVSEAHEQDGHLYLGSFRSPFLCRLNLQDA
SIO_010081: LOC101531039
subclass of: SO_0000673
so part of: LOC101531039
location: complement(join(9684814..9685023,9689117..9689309,9689899..9690033,9691784..9691958,9694546..9694662,9695701..9695793,9711702..9711817,9714423..9714539,9731535..9731626))
location: region:9684814-9731626:-1
so has part: feature:9731535-9731626:-1:exon
so has part: feature:9714423-9714539:-1:exon
so has part: feature:9711702-9711817:-1:exon
so has part: feature:9695701-9695793:-1:exon
so has part: feature:9694546-9694662:-1:exon
so has part: feature:9691784-9691958:-1:exon
so has part: feature:9689899-9690033:-1:exon
so has part: feature:9689117-9689309:-1:exon
so has part: feature:9684814-9685023:-1:exon

XP_004593426.1
type: Protein
SIO_000068: ncbiprotein

position:9684814:-1
position: 9684814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9731626:-1
position: 9731626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9731535-9731626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9714423-9714539:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9711702-9711817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9695701-9695793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9694546-9694662:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9691784-9691958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9689899-9690033:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9689117-9689309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9684814-9685023:-1:exon

ACSS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ACSS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9764172..9808447)
location: region:9764172-9808447:-1
so has part: feature:9764172-9808447:-1:exon
subclass of: SO_0000010

101531285
type: Gene
SIO_000068: ncbigene

position:9764172:-1
position: 9764172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9808447:-1
position: 9808447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9764172-9808447:-1:exon

ACSS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ACSS1
product: acyl-CoA synthetase short chain family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004593370.2
SIO_010081: ACSS1
subclass of: SO_0000673
so part of: ACSS1
location: complement(join(9764172..9764360,9765262..9765380,9768736..9768799,9768926..9769053,9769400..9769526,9769739..9769851,9770675..9770767,9772626..9772763,9774036..9774183,9777060..9777212,9777582..9777757,9781680..9781879,9798257..9798353,9808153..9808447))
location: region:9764172-9808447:-1
so has part: feature:9808153-9808447:-1:exon
so has part: feature:9798257-9798353:-1:exon
so has part: feature:9781680-9781879:-1:exon
so has part: feature:9777582-9777757:-1:exon
so has part: feature:9777060-9777212:-1:exon
so has part: feature:9774036-9774183:-1:exon
so has part: feature:9772626-9772763:-1:exon
so has part: feature:9770675-9770767:-1:exon
so has part: feature:9769739-9769851:-1:exon
so has part: feature:9769400-9769526:-1:exon
so has part: feature:9768926-9769053:-1:exon
so has part: feature:9768736-9768799:-1:exon
so has part: feature:9765262-9765380:-1:exon
so has part: feature:9764172-9764360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9808153-9808447:-1:exon

position:9808153:-1
position: 9808153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9798257-9798353:-1:exon

position:9798257:-1
position: 9798257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9798353:-1
position: 9798353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9781680-9781879:-1:exon

position:9781680:-1
position: 9781680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9781879:-1
position: 9781879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9777582-9777757:-1:exon

position:9777582:-1
position: 9777582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9777757:-1
position: 9777757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9777060-9777212:-1:exon

position:9777060:-1
position: 9777060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9777212:-1
position: 9777212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9774036-9774183:-1:exon

position:9774036:-1
position: 9774036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9774183:-1
position: 9774183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9772626-9772763:-1:exon

position:9772626:-1
position: 9772626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9772763:-1
position: 9772763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9770675-9770767:-1:exon

position:9770675:-1
position: 9770675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9770767:-1
position: 9770767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9769739-9769851:-1:exon

position:9769739:-1
position: 9769739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9769851:-1
position: 9769851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9769400-9769526:-1:exon

position:9769400:-1
position: 9769400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9769526:-1
position: 9769526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9768926-9769053:-1:exon

position:9768926:-1
position: 9768926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9769053:-1
position: 9769053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9768736-9768799:-1:exon

position:9768736:-1
position: 9768736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9768799:-1
position: 9768799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9765262-9765380:-1:exon

position:9765262:-1
position: 9765262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9765380:-1
position: 9765380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9764172-9764360:-1:exon

position:9764360:-1
position: 9764360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACSS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ACSS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetyl-coenzyme A synthetase 2-like, mitochondrial
translation: MAARSLGRGVGRLLGSLLVRSGQPLRSLRWVSAPRGADAPPPGSYPVLSAQAAREPAAFWGPLAREVLVWDTPYHTVWDCDFSRGKIGWFLGGRLNVSVCCLDQHVQKSPESVALIWERDEPGTEVRITYRELLETTCRLANTLKRYGVHRGDRVAIYMPVSPMAVAAMLACARIGAIHNVVFAGFSAESLAGRINDAKCKVVITYNQGLRGGRVTELKKIVDEAVKQCPTIQHVLVAHRTDAKVNMGPLDVHLEQEMANEVPVCAPEIMGSEDMLFMLYTSGSTGKPKGLVHTQAGYLLYAAVTHKLVFDYQPGDVFGCVADIGWITGHSYVVYGPLCNGATSVLFESTPVYPDAGRYWETVQRLKINQFYGAPTAVRLLLKHGDAWVKKYDRSSLRTLGSVGEPINNEAWDWLHKVVGDSRCTLVDTWWQTETGGICIAPRPSEEGAEILPGMAMRPFFGILPVLLDEKGNVVEGGEVTGALCIAQAWPGMARTIYGDHNRFIDSYFRTFPGYYFTGDGAYRTESGYYQITGRMDDVINISGHRLGTAEIEDAIAEHPAVPETAVVSFPHDIKGEVPFAFIVLKDDASDTESVMKEVKSSVAARIAKYAVPDQILVVKRLPKTRSGKVMRRLLRKIVMGTVQDLGDTTTLEDPNVIVEIMNTYQKHKDRQAATTK
SIO_010081: ACSS1
subclass of: SO_0000673
so part of: ACSS1
location: complement(join(9764178..9764360,9765262..9765380,9768736..9768799,9768926..9769053,9769400..9769526,9769739..9769851,9770675..9770767,9772626..9772763,9774036..9774183,9777060..9777212,9777582..9777757,9781680..9781879,9798257..9798353,9808153..9808447))
location: region:9764178-9808447:-1
so has part: feature:9808153-9808447:-1:exon
so has part: feature:9798257-9798353:-1:exon
so has part: feature:9781680-9781879:-1:exon
so has part: feature:9777582-9777757:-1:exon
so has part: feature:9777060-9777212:-1:exon
so has part: feature:9774036-9774183:-1:exon
so has part: feature:9772626-9772763:-1:exon
so has part: feature:9770675-9770767:-1:exon
so has part: feature:9769739-9769851:-1:exon
so has part: feature:9769400-9769526:-1:exon
so has part: feature:9768926-9769053:-1:exon
so has part: feature:9768736-9768799:-1:exon
so has part: feature:9765262-9765380:-1:exon
so has part: feature:9764178-9764360:-1:exon

XP_004593427.1
type: Protein
SIO_000068: ncbiprotein

position:9764178:-1
position: 9764178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9808153-9808447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9798257-9798353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9781680-9781879:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9777582-9777757:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9777060-9777212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9774036-9774183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9772626-9772763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9770675-9770767:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9769739-9769851:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9769400-9769526:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9768926-9769053:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9768736-9768799:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9765262-9765380:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9764178-9764360:-1:exon

LOC101531535
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101531535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9828109..9828540)
location: region:9828109-9828540:-1
so has part: feature:9828109-9828540:-1:exon
subclass of: SO_0000010

101531535
type: Gene
SIO_000068: ncbigene

position:9828109:-1
position: 9828109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9828540:-1
position: 9828540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9828109-9828540:-1:exon

LOC101531535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101531535
product: visual system homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_004593371.1
SIO_010081: LOC101531535
subclass of: SO_0000673
so part of: LOC101531535
location: complement(9828109..9828540)
location: region:9828109-9828540:-1
so has part: feature:9828109-9828540:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9828109-9828540:-1:exon

LOC101531535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101531535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: visual system homeobox 1
translation: MSGRDALSDGRTRSRAARALGGSSGASRPRGFAITDLLGLETELPAPGSGCEGAPAAPGPGPGFSRSCLAPGALPLGLGLLCGLGAKPPAASARAPYLLLTDVPFLPPAEPEPAAPQPPGGPPAACQKRGESVSTSGNQTPAP
SIO_010081: LOC101531535
subclass of: SO_0000673
so part of: LOC101531535
location: complement(9828109..9828540)
location: region:9828109-9828540:-1
so has part: feature:9828109-9828540:-1:exon

XP_004593428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9828109-9828540:-1:exon

LOC101531757
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101531757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9830130..>9830984)
location: region:9830130-9830984:-1
so has part: feature:9830130-9830984:-1:exon
subclass of: SO_0000010

101531757
type: Gene
SIO_000068: ncbigene

position:9830130:-1
position: 9830130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9830984:-1
position: 9830984
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9830130-9830984:-1:exon

LOC101531757
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101531757
product: visual system homeobox 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_012929273.2
SIO_010081: LOC101531757
subclass of: SO_0000673
so part of: LOC101531757
location: complement(join(9830130..9830419,9830924..>9830984))
location: region:9830130-9830984:-1
so has part: feature:9830924-9830984:-1:exon
so has part: feature:9830130-9830419:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9830924-9830984:-1:exon

position:9830924:-1
position: 9830924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9830130-9830419:-1:exon

position:9830419:-1
position: 9830419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101531757
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101531757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: visual system homeobox 1-like
translation: DSVLNSADGGLRGACVPWLLGMHKKSTETVRKPGSDDRLTGLWDPDHLQEASSRRPAGLERGSCQESPEHGLEDRAMDLSSSARQESRKVPPGAGAQGCSDIMELDRPQLGKPGAS
SIO_010081: LOC101531757
subclass of: SO_0000673
so part of: LOC101531757
location: complement(join(9830130..9830419,9830924..>9830984))
location: region:9830130-9830984:-1
so has part: feature:9830924-9830984:-1:exon
so has part: feature:9830130-9830419:-1:exon

XP_012784727.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9830924-9830984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9830130-9830419:-1:exon

ENTPD6
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ENTPD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9905968..9922256
location: region:9905968-9922256:1
so has part: feature:9905968-9922256:1:exon
subclass of: SO_0000010

101531995
type: Gene
SIO_000068: ncbigene

position:9905968:1
position: 9905968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9922256:1
position: 9922256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9905968-9922256:1:exon

ENTPD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ENTPD6
product: ectonucleoside triphosphate diphosphohydrolase 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XM_004593373.1
SIO_010081: ENTPD6
subclass of: SO_0000673
so part of: ENTPD6
location: join(9905968..9906265,9908937..9909013,9911895..9912038,9912920..9912995,9913417..9913452,9914298..9914386,9915226..9915305,9915626..9915690,9917320..9917421,9918341..9918343,9918792..9918929,9921096..9921152,9921954..9922066,9922152..9922256)
location: region:9905968-9922256:1
so has part: feature:9905968-9906265:1:exon
so has part: feature:9908937-9909013:1:exon
so has part: feature:9911895-9912038:1:exon
so has part: feature:9912920-9912995:1:exon
so has part: feature:9913417-9913452:1:exon
so has part: feature:9914298-9914386:1:exon
so has part: feature:9915226-9915305:1:exon
so has part: feature:9915626-9915690:1:exon
so has part: feature:9917320-9917421:1:exon
so has part: feature:9918341-9918343:1:exon
so has part: feature:9918792-9918929:1:exon
so has part: feature:9921096-9921152:1:exon
so has part: feature:9921954-9922066:1:exon
so has part: feature:9922152-9922256:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9905968-9906265:1:exon

position:9906265:1
position: 9906265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9908937-9909013:1:exon

position:9908937:1
position: 9908937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9909013:1
position: 9909013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9911895-9912038:1:exon

position:9911895:1
position: 9911895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9912038:1
position: 9912038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9912920-9912995:1:exon

position:9912920:1
position: 9912920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9912995:1
position: 9912995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9913417-9913452:1:exon

position:9913417:1
position: 9913417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9913452:1
position: 9913452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9914298-9914386:1:exon

position:9914298:1
position: 9914298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9914386:1
position: 9914386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9915226-9915305:1:exon

position:9915226:1
position: 9915226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9915305:1
position: 9915305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9915626-9915690:1:exon

position:9915626:1
position: 9915626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9915690:1
position: 9915690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9917320-9917421:1:exon

position:9917320:1
position: 9917320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9917421:1
position: 9917421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9918341-9918343:1:exon

position:9918341:1
position: 9918341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9918343:1
position: 9918343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9918792-9918929:1:exon

position:9918792:1
position: 9918792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9918929:1
position: 9918929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9921096-9921152:1:exon

position:9921096:1
position: 9921096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9921152:1
position: 9921152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9921954-9922066:1:exon

position:9921954:1
position: 9921954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9922066:1
position: 9922066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9922152-9922256:1:exon

position:9922152:1
position: 9922152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ENTPD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ENTPD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectonucleoside triphosphate diphosphohydrolase 6
translation: MRKLPSHGTLRMTRVMYPLGLCVGFFIYVVYIKWHRASTTQALFSISGVAPGAPWGPQAHSAPETAAAARDFEVFYGIMFDAGSTGTRIHVFRFARLPGETPTLTHETFKALKPGLSAYADDVDKSAQGIQELLDVAKQDIPFDFWKATPLVLKATAGLRLLPGVKAQKLLQKVEEVFRASPFLVEDDCVSIMNGTDEGVSAWITVNFLTGSLKTPGRSSVGMLDLGGGSTQITFLPSLEGTLQSSPPGHLTALHMFNRTFRLYSYSYLGLGLMSARLAILGGVEGKPARDGQELLSPCLPSNFRGEWEHAEITYQIAGQETAASLYEPCARRVSEVLQDKVHRTEEVKHVEFYAFSYYYDLAASVGLIDAEKGGSLVVGDFETAAKYVCRTLETQPRSSPFVCMDLTYISLLLQEFGFPRDKVLKLTRKIDNVETSWALGAIFHYIDSLNHRRAPARSS
SIO_010081: ENTPD6
subclass of: SO_0000673
so part of: ENTPD6
location: join(9905968..9906265,9908937..9909013,9911895..9912038,9912920..9912995,9913417..9913452,9914298..9914386,9915226..9915305,9915626..9915690,9917320..9917421,9918341..9918343,9918792..9918929,9921096..9921152,9921954..9922066,9922152..9922256)
location: region:9905968-9922256:1
so has part: feature:9905968-9906265:1:exon
so has part: feature:9908937-9909013:1:exon
so has part: feature:9911895-9912038:1:exon
so has part: feature:9912920-9912995:1:exon
so has part: feature:9913417-9913452:1:exon
so has part: feature:9914298-9914386:1:exon
so has part: feature:9915226-9915305:1:exon
so has part: feature:9915626-9915690:1:exon
so has part: feature:9917320-9917421:1:exon
so has part: feature:9918341-9918343:1:exon
so has part: feature:9918792-9918929:1:exon
so has part: feature:9921096-9921152:1:exon
so has part: feature:9921954-9922066:1:exon
so has part: feature:9922152-9922256:1:exon

XP_004593430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9905968-9906265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9908937-9909013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9911895-9912038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9912920-9912995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9913417-9913452:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9914298-9914386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9915226-9915305:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9915626-9915690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9917320-9917421:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9918341-9918343:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9918792-9918929:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9921096-9921152:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9921954-9922066:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9922152-9922256:1:exon

PYGB
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PYGB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9936387..9975748
location: region:9936387-9975748:1
so has part: feature:9936387-9975748:1:exon
subclass of: SO_0000010

101517184
type: Gene
SIO_000068: ncbigene

position:9936387:1
position: 9936387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9975748:1
position: 9975748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9936387-9975748:1:exon

PYGB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PYGB
product: glycogen phosphorylase B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 15 Proteins
transcript id: XM_004593319.1
SIO_010081: PYGB
subclass of: SO_0000673
so part of: PYGB
location: join(9936387..9936722,9953732..9953833,9955687..9955765,9958925..9959028,9960162..9960293,9960606..9960717,9961067..9961149,9961999..9962142,9962670..9962762,9963542..9963688,9964807..9964970,9965571..9965685,9966194..9966295,9966406..9966553,9968765..9968823,9971596..9971737,9972701..9972908,9973879..9974013,9975130..9975196,9975574..9975748)
location: region:9936387-9975748:1
so has part: feature:9936387-9936722:1:exon
so has part: feature:9953732-9953833:1:exon
so has part: feature:9955687-9955765:1:exon
so has part: feature:9958925-9959028:1:exon
so has part: feature:9960162-9960293:1:exon
so has part: feature:9960606-9960717:1:exon
so has part: feature:9961067-9961149:1:exon
so has part: feature:9961999-9962142:1:exon
so has part: feature:9962670-9962762:1:exon
so has part: feature:9963542-9963688:1:exon
so has part: feature:9964807-9964970:1:exon
so has part: feature:9965571-9965685:1:exon
so has part: feature:9966194-9966295:1:exon
so has part: feature:9966406-9966553:1:exon
so has part: feature:9968765-9968823:1:exon
so has part: feature:9971596-9971737:1:exon
so has part: feature:9972701-9972908:1:exon
so has part: feature:9973879-9974013:1:exon
so has part: feature:9975130-9975196:1:exon
so has part: feature:9975574-9975748:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9936387-9936722:1:exon

position:9936722:1
position: 9936722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9953732-9953833:1:exon

position:9953732:1
position: 9953732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9953833:1
position: 9953833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9955687-9955765:1:exon

position:9955687:1
position: 9955687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9955765:1
position: 9955765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9958925-9959028:1:exon

position:9958925:1
position: 9958925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9959028:1
position: 9959028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9960162-9960293:1:exon

position:9960162:1
position: 9960162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9960293:1
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