Ochotona princeps isolate UAM:Mamm:113957 chromosome 16, OchPri4.0, whole genome shotgun sequence.
type: Entry
definition: Ochotona princeps isolate UAM:Mamm:113957 chromosome 16, OchPri4.0, whole genome shotgun sequence.
sequence version: NC_050551.1
sequence date: 2020-10-09
sequence: sequence
division: CON
label: NC_050551.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA666703
dblink: SAMN15664588
keyword: WGS
keyword: RefSeq
source: Ochotona princeps (American pika)
organism: Ochotona princeps
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM025736.1.\nAssembly name: OchPri4.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of British\nColumbia Okanagan on 2020/09/21. The original whole-genome shotgun\nproject has the accession JACJUE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of British Columbia\n Okanagan\nAssembly Method :: Dovetail HiRise v. 2017\nAssembly Name :: OchPri4.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: GCA_000292845.1\nGenome Coverage :: 23.68x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Ochotona princeps Annotation Release\n 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 81456354
topology: linear
so has quality: SO_0000987
location: 1..81456354
location: region:1-81456354:1
RO_0002162: 9978

NC_050551
type: RefSeq
SIO_000068: refseq

PRJNA666703
type: BioProject
SIO_000068: bioproject

SAMN15664588
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81456354:1
position: 81456354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-81456354:1:source
so part of: sequence
organism: Ochotona princeps
mol type: genomic DNA
isolate: UAM:Mamm:113957
chromosome: 16
sex: male
tissue type: liver
dev stage: adult
country: USA: Beaverhead-Deerlodge National Forest, Montana
lat lon: 45.34309 N 113.67609 W
collection date: 2010-06-19

9978
type: Taxonomy
SIO_000068: taxonomy

STX6
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: STX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4083..59706)
location: region:4083-59706:-1
so has part: feature:4083-59706:-1:exon
subclass of: SO_0000010

101520636
type: Gene
SIO_000068: ncbigene

position:4083:-1
position: 4083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59706:-1
position: 59706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4083-59706:-1:exon

STX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: STX6
product: syntaxin 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 10 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578836.2
SIO_010081: STX6
subclass of: SO_0000673
so part of: STX6
location: complement(join(4083..4274,8764..8858,10979..11085,11811..11936,15357..15419,27395..27489,29743..29912,59661..59706))
location: region:4083-59706:-1
so has part: feature:59661-59706:-1:exon
so has part: feature:29743-29912:-1:exon
so has part: feature:27395-27489:-1:exon
so has part: feature:15357-15419:-1:exon
so has part: feature:11811-11936:-1:exon
so has part: feature:10979-11085:-1:exon
so has part: feature:8764-8858:-1:exon
so has part: feature:4083-4274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59661-59706:-1:exon

position:59661:-1
position: 59661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29743-29912:-1:exon

position:29743:-1
position: 29743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29912:-1
position: 29912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27395-27489:-1:exon

position:27395:-1
position: 27395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27489:-1
position: 27489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15357-15419:-1:exon

position:15357:-1
position: 15357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15419:-1
position: 15419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11811-11936:-1:exon

position:11811:-1
position: 11811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11936:-1
position: 11936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10979-11085:-1:exon

position:10979:-1
position: 10979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11085:-1
position: 11085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8764-8858:-1:exon

position:8764:-1
position: 8764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8858:-1
position: 8858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4083-4274:-1:exon

position:4274:-1
position: 4274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: STX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-6
translation: MSMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSSSSVQALAERRNRQALLGDSGSQSWSSRAPDKYGRLDHELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKSMSQRIGGELEEQAVMLDSFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAVLFAILLVVLVLFLVL
SIO_010081: STX6
subclass of: SO_0000673
so part of: STX6
location: complement(join(4198..4274,8764..8858,10979..11085,11811..11936,15357..15419,27395..27489,29743..29912,59661..59695))
location: region:4198-59695:-1
so has part: feature:59661-59695:-1:exon
so has part: feature:29743-29912:-1:exon
so has part: feature:27395-27489:-1:exon
so has part: feature:15357-15419:-1:exon
so has part: feature:11811-11936:-1:exon
so has part: feature:10979-11085:-1:exon
so has part: feature:8764-8858:-1:exon
so has part: feature:4198-4274:-1:exon

XP_004578893.1
type: Protein
SIO_000068: ncbiprotein

position:4198:-1
position: 4198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59695:-1
position: 59695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59661-59695:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29743-29912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27395-27489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15357-15419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11811-11936:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10979-11085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8764-8858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4198-4274:-1:exon

IER5
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: IER5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 70676..71152
location: region:70676-71152:1
so has part: feature:70676-71152:1:exon
subclass of: SO_0000010

101526047
type: Gene
SIO_000068: ncbigene

position:70676:1
position: 70676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71152:1
position: 71152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70676-71152:1:exon

IER5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: IER5
product: immediate early response 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_004578991.1
SIO_010081: IER5
subclass of: SO_0000673
so part of: IER5
location: 70676..71152
location: region:70676-71152:1
so has part: feature:70676-71152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70676-71152:1:exon

IER5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: IER5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immediate early response gene 5 protein
translation: MEARLEAHRVVSISLGKMFSARTQRGGGKLHKNLLVSLVLRSARQVSLSQPGPSAAQPPAEGNATPGQAGDPRKRDAAGGGHAGHSAPRKRPRRQLPLTAADDEDMDTDTGAVAQLASVFGSSFSGLLRKSPAGGREEAVEPRARRGLRSWSWAVLAC
SIO_010081: IER5
subclass of: SO_0000673
so part of: IER5
location: 70676..71152
location: region:70676-71152:1
so has part: feature:70676-71152:1:exon

XP_004579048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70676-71152:1:exon

LOC101520399
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101520399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(121893..123902)
location: region:121893-123902:-1
so has part: feature:121893-123902:-1:exon
subclass of: SO_0000010

101520399
type: Gene
SIO_000068: ncbigene

position:121893:-1
position: 121893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123902:-1
position: 123902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121893-123902:-1:exon

LOC101520399
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101520399
product: ATP-dependent RNA helicase DDX18-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 Proteins
transcript id: XM_012930795.1
SIO_010081: LOC101520399
subclass of: SO_0000673
so part of: LOC101520399
location: complement(join(121893..123509,123579..123902))
location: region:121893-123902:-1
so has part: feature:123579-123902:-1:exon
so has part: feature:121893-123509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123579-123902:-1:exon

position:123579:-1
position: 123579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121893-123509:-1:exon

position:123509:-1
position: 123509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101520399
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101520399
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX18-like
translation: MSHLPMKLLRRKIEKRNLKLQARASDVNLSEDQNGDVPEEAMAQGKAKKARKRSMSAGLSEAQNGAMTEDVVEKIKVKQSPQKPAALTNGEMAAESPSPESNKKKKKCKKRKLANDAGPDAKKAKVEGSDTEAPKETESSVAAADNKEDSEVPSLPMGLTGAFEDTSFESLSNLVNENTLKAIKEMGFTNMTEIQHKSVRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGINIIVAXPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKASATMDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYNPPDDPKEYIHCVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFDFSWSKISNIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSLXSNDGKVRKRGGGGGFGYQKTKKVEKSIIFKHISKKPSNRRQFSH
SIO_010081: LOC101520399
subclass of: SO_0000673
so part of: LOC101520399
location: complement(join(121893..123509,123579..123902))
location: region:121893-123902:-1
so has part: feature:123579-123902:-1:exon
so has part: feature:121893-123509:-1:exon

XP_012786249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123579-123902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121893-123509:-1:exon

CACNA1E
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CACNA1E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 187169..368069
location: region:187169-368069:1
so has part: feature:187169-368069:1:exon
subclass of: SO_0000010

101525805
type: Gene
SIO_000068: ncbigene

position:187169:1
position: 187169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368069:1
position: 368069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187169-368069:1:exon

CACNA1E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CACNA1E
product: calcium voltage-gated channel subunit alpha1 E
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578990.1
SIO_010081: CACNA1E
subclass of: SO_0000673
so part of: CACNA1E
location: join(187169..187434,205704..205809,206293..206432,252535..252638,253421..253458,255107..255328,270142..270245,307461..307576,309992..310045,310186..310275,311345..311554,311941..312053,313053..313165,313816..313947,314317..314389,315293..315410,317093..317160,317897..317994,320849..320905,321774..322424,322650..322939,323361..323517,324503..324632,325151..325210,325464..325570,333461..333472,334957..335053,336945..337105,338855..338992,339506..339707,340273..340437,340895..341005,345525..345608,346160..346285,347815..347880,350681..350772,352155..352320,353715..353842,356884..356980,358656..358761,359283..359390,359782..359882,360026..360132,364063..364177,365406..365534,366105..366285,366806..366996,367533..368069)
location: region:187169-368069:1
so has part: feature:187169-187434:1:exon
so has part: feature:205704-205809:1:exon
so has part: feature:206293-206432:1:exon
so has part: feature:252535-252638:1:exon
so has part: feature:253421-253458:1:exon
so has part: feature:255107-255328:1:exon
so has part: feature:270142-270245:1:exon
so has part: feature:307461-307576:1:exon
so has part: feature:309992-310045:1:exon
so has part: feature:310186-310275:1:exon
so has part: feature:311345-311554:1:exon
so has part: feature:311941-312053:1:exon
so has part: feature:313053-313165:1:exon
so has part: feature:313816-313947:1:exon
so has part: feature:314317-314389:1:exon
so has part: feature:315293-315410:1:exon
so has part: feature:317093-317160:1:exon
so has part: feature:317897-317994:1:exon
so has part: feature:320849-320905:1:exon
so has part: feature:321774-322424:1:exon
so has part: feature:322650-322939:1:exon
so has part: feature:323361-323517:1:exon
so has part: feature:324503-324632:1:exon
so has part: feature:325151-325210:1:exon
so has part: feature:325464-325570:1:exon
so has part: feature:333461-333472:1:exon
so has part: feature:334957-335053:1:exon
so has part: feature:336945-337105:1:exon
so has part: feature:338855-338992:1:exon
so has part: feature:339506-339707:1:exon
so has part: feature:340273-340437:1:exon
so has part: feature:340895-341005:1:exon
so has part: feature:345525-345608:1:exon
so has part: feature:346160-346285:1:exon
so has part: feature:347815-347880:1:exon
so has part: feature:350681-350772:1:exon
so has part: feature:352155-352320:1:exon
so has part: feature:353715-353842:1:exon
so has part: feature:356884-356980:1:exon
so has part: feature:358656-358761:1:exon
so has part: feature:359283-359390:1:exon
so has part: feature:359782-359882:1:exon
so has part: feature:360026-360132:1:exon
so has part: feature:364063-364177:1:exon
so has part: feature:365406-365534:1:exon
so has part: feature:366105-366285:1:exon
so has part: feature:366806-366996:1:exon
so has part: feature:367533-368069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187169-187434:1:exon

position:187434:1
position: 187434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205704-205809:1:exon

position:205704:1
position: 205704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205809:1
position: 205809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206293-206432:1:exon

position:206293:1
position: 206293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206432:1
position: 206432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:252535-252638:1:exon

position:252535:1
position: 252535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252638:1
position: 252638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:253421-253458:1:exon

position:253421:1
position: 253421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253458:1
position: 253458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:255107-255328:1:exon

position:255107:1
position: 255107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255328:1
position: 255328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:270142-270245:1:exon

position:270142:1
position: 270142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270245:1
position: 270245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:307461-307576:1:exon

position:307461:1
position: 307461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307576:1
position: 307576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:309992-310045:1:exon

position:309992:1
position: 309992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310045:1
position: 310045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:310186-310275:1:exon

position:310186:1
position: 310186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310275:1
position: 310275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:311345-311554:1:exon

position:311345:1
position: 311345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311554:1
position: 311554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:311941-312053:1:exon

position:311941:1
position: 311941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312053:1
position: 312053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:313053-313165:1:exon

position:313053:1
position: 313053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313165:1
position: 313165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:313816-313947:1:exon

position:313816:1
position: 313816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313947:1
position: 313947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:314317-314389:1:exon

position:314317:1
position: 314317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314389:1
position: 314389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:315293-315410:1:exon

position:315293:1
position: 315293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315410:1
position: 315410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:317093-317160:1:exon

position:317093:1
position: 317093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317160:1
position: 317160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:317897-317994:1:exon

position:317897:1
position: 317897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317994:1
position: 317994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:320849-320905:1:exon

position:320849:1
position: 320849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320905:1
position: 320905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:321774-322424:1:exon

position:321774:1
position: 321774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322424:1
position: 322424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:322650-322939:1:exon

position:322650:1
position: 322650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322939:1
position: 322939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:323361-323517:1:exon

position:323361:1
position: 323361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323517:1
position: 323517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:324503-324632:1:exon

position:324503:1
position: 324503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324632:1
position: 324632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:325151-325210:1:exon

position:325151:1
position: 325151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325210:1
position: 325210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:325464-325570:1:exon

position:325464:1
position: 325464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325570:1
position: 325570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:333461-333472:1:exon

position:333461:1
position: 333461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333472:1
position: 333472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:334957-335053:1:exon

position:334957:1
position: 334957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335053:1
position: 335053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:336945-337105:1:exon

position:336945:1
position: 336945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337105:1
position: 337105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:338855-338992:1:exon

position:338855:1
position: 338855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338992:1
position: 338992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:339506-339707:1:exon

position:339506:1
position: 339506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339707:1
position: 339707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:340273-340437:1:exon

position:340273:1
position: 340273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340437:1
position: 340437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:340895-341005:1:exon

position:340895:1
position: 340895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341005:1
position: 341005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:345525-345608:1:exon

position:345525:1
position: 345525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345608:1
position: 345608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:346160-346285:1:exon

position:346160:1
position: 346160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346285:1
position: 346285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:347815-347880:1:exon

position:347815:1
position: 347815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347880:1
position: 347880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:350681-350772:1:exon

position:350681:1
position: 350681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350772:1
position: 350772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:352155-352320:1:exon

position:352155:1
position: 352155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352320:1
position: 352320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:353715-353842:1:exon

position:353715:1
position: 353715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353842:1
position: 353842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:356884-356980:1:exon

position:356884:1
position: 356884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356980:1
position: 356980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:358656-358761:1:exon

position:358656:1
position: 358656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358761:1
position: 358761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:359283-359390:1:exon

position:359283:1
position: 359283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359390:1
position: 359390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:359782-359882:1:exon

position:359782:1
position: 359782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359882:1
position: 359882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:360026-360132:1:exon

position:360026:1
position: 360026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360132:1
position: 360132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:364063-364177:1:exon

position:364063:1
position: 364063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364177:1
position: 364177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:365406-365534:1:exon

position:365406:1
position: 365406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365534:1
position: 365534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:366105-366285:1:exon

position:366105:1
position: 366105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366285:1
position: 366285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:366806-366996:1:exon

position:366806:1
position: 366806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366996:1
position: 366996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:367533-368069:1:exon

position:367533:1
position: 367533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CACNA1E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CACNA1E
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:322405..322407,aa:OTHER)
product: LOW QUALITY PROTEIN: voltage-dependent R-type calcium channel subunit alpha-1E
translation: MARFGEAAVGRPGSGEGDSDQSRNRPETPVPASGSAAAYKQSKAQRARTMALYNPIPVRQNCFTVNRSLFVFGEDNVVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNTHVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMSSREIVPPPHVPAGVLEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEENKNSGTSALEVLRRATIKRSRTEAMTRDSSDEHCVDISSVGTPLARASIKSAKVDGASYFRHKERLLRISVRHAVKSQVFYWIVLSLVALNTACVAIVHHNQPQWLTHLLYYAEFLFLGLFLLEMSLKMYGMGPRLYFHSSFNCFDFGVTVGSIFEVVWAIFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFNFNDGTPSANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVSSGMWSAVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQKAKEVSPMSAPNVPSIERDRRRRHHMSMWEPRSSHLRERRRRHHMSVWEQRTSQLRRHMQMSSQEALNKDEAPPMNPLNPLNPLSPLNPLNAHPSLYRRPRPIEGLALGLGLDKCEEERANRGGSLKGVLDSQRSPLSLSRREPPWLARPCHGNCEPAPQETTGGETVVTFEDQARHRQSQRRSRHRRVRTEAKESSSASRSRSASQERNLDEGALTEAERGQEAQGSLGKEPMIHEEEQAQDSRRXRKPRVSTGSGLAGTLEGADTALTPPLPELDEGQDAASTEQQLRASQEPSLQGHAQLDVGRAISQSEPDLSCTATTDKVATESSDVTVAIPDAEPLVDSTVVHISNKMDGEASPLKEAESKEAEQETEKTKKKERPAGGKAMVPHSSMFIFSTSNPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNRVLRYFDYVFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANALGTNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKECIGNYVDHEKNKMEVKGREWKRHEFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRSNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRHTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPCTYELALKYLNIAFTMVFSLECVLKVIAFGFLNYFRDTWNIFDFITVIGSITEIILADSKLVNTTGFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESHINRHNNFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCEPDTTAPAGQQESERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDRAACGRIHYTEMYEMLTLMSPPLGLGKRCPSKVAYKRLVLMNMPVAEDMTVHFTSTLMALIRTALDIKIAKGGADRQQLDSELQKEILAIWPHLSQKMLDLLVPMPKASDLTVGKIYAAMMIMDYYKQSKVKKQRRQLEEQKNAPMFQRMEPSSLPQEIIANAKALPYLPPGPPAGLGGRSRCPAMSPLSPQEIFQLTCMDPPEEEGQFQEQRSLEPEVSELESVRSANHGTQLPQDTREQEASGRASSMPRLTMEPQVVTDPGSMRRSFSTIRDKRSSSSW…
SIO_010081: CACNA1E
subclass of: SO_0000673
so part of: CACNA1E
location: join(187169..187434,205704..205809,206293..206432,252535..252638,253421..253458,255107..255328,270142..270245,307461..307576,309992..310045,310186..310275,311345..311554,311941..312053,313053..313165,313816..313947,314317..314389,315293..315410,317093..317160,317897..317994,320849..320905,321774..322424,322650..322939,323361..323517,324503..324632,325151..325210,325464..325570,333461..333472,334957..335053,336945..337105,338855..338992,339506..339707,340273..340437,340895..341005,345525..345608,346160..346285,347815..347880,350681..350772,352155..352320,353715..353842,356884..356980,358656..358761,359283..359390,359782..359882,360026..360132,364063..364177,365406..365534,366105..366285,366806..366996,367533..368069)
location: region:187169-368069:1
so has part: feature:187169-187434:1:exon
so has part: feature:205704-205809:1:exon
so has part: feature:206293-206432:1:exon
so has part: feature:252535-252638:1:exon
so has part: feature:253421-253458:1:exon
so has part: feature:255107-255328:1:exon
so has part: feature:270142-270245:1:exon
so has part: feature:307461-307576:1:exon
so has part: feature:309992-310045:1:exon
so has part: feature:310186-310275:1:exon
so has part: feature:311345-311554:1:exon
so has part: feature:311941-312053:1:exon
so has part: feature:313053-313165:1:exon
so has part: feature:313816-313947:1:exon
so has part: feature:314317-314389:1:exon
so has part: feature:315293-315410:1:exon
so has part: feature:317093-317160:1:exon
so has part: feature:317897-317994:1:exon
so has part: feature:320849-320905:1:exon
so has part: feature:321774-322424:1:exon
so has part: feature:322650-322939:1:exon
so has part: feature:323361-323517:1:exon
so has part: feature:324503-324632:1:exon
so has part: feature:325151-325210:1:exon
so has part: feature:325464-325570:1:exon
so has part: feature:333461-333472:1:exon
so has part: feature:334957-335053:1:exon
so has part: feature:336945-337105:1:exon
so has part: feature:338855-338992:1:exon
so has part: feature:339506-339707:1:exon
so has part: feature:340273-340437:1:exon
so has part: feature:340895-341005:1:exon
so has part: feature:345525-345608:1:exon
so has part: feature:346160-346285:1:exon
so has part: feature:347815-347880:1:exon
so has part: feature:350681-350772:1:exon
so has part: feature:352155-352320:1:exon
so has part: feature:353715-353842:1:exon
so has part: feature:356884-356980:1:exon
so has part: feature:358656-358761:1:exon
so has part: feature:359283-359390:1:exon
so has part: feature:359782-359882:1:exon
so has part: feature:360026-360132:1:exon
so has part: feature:364063-364177:1:exon
so has part: feature:365406-365534:1:exon
so has part: feature:366105-366285:1:exon
so has part: feature:366806-366996:1:exon
so has part: feature:367533-368069:1:exon

XP_004579047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187169-187434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205704-205809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206293-206432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252535-252638:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:253421-253458:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255107-255328:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:270142-270245:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307461-307576:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:309992-310045:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310186-310275:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:311345-311554:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:311941-312053:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:313053-313165:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:313816-313947:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:314317-314389:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:315293-315410:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:317093-317160:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:317897-317994:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:320849-320905:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:321774-322424:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:322650-322939:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:323361-323517:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:324503-324632:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:325151-325210:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:325464-325570:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:333461-333472:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:334957-335053:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:336945-337105:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:338855-338992:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:339506-339707:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:340273-340437:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:340895-341005:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:345525-345608:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:346160-346285:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:347815-347880:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:350681-350772:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:352155-352320:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:353715-353842:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:356884-356980:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:358656-358761:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:359283-359390:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:359782-359882:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:360026-360132:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:364063-364177:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:365406-365534:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:366105-366285:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:366806-366996:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:367533-368069:1:exon

GLUL
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: GLUL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(459623..462185)
location: region:459623-462185:-1
so has part: feature:459623-462185:-1:exon
subclass of: SO_0000010

101520151
type: Gene
SIO_000068: ncbigene

position:459623:-1
position: 459623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462185:-1
position: 462185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459623-462185:-1:exon

GLUL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GLUL
product: glutamate-ammonia ligase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578835.1
SIO_010081: GLUL
subclass of: SO_0000673
so part of: GLUL
location: complement(join(459623..459941,460159..460358,460438..460565,460640..460786,461431..461592,462020..462185))
location: region:459623-462185:-1
so has part: feature:462020-462185:-1:exon
so has part: feature:461431-461592:-1:exon
so has part: feature:460640-460786:-1:exon
so has part: feature:460438-460565:-1:exon
so has part: feature:460159-460358:-1:exon
so has part: feature:459623-459941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462020-462185:-1:exon

position:462020:-1
position: 462020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:461431-461592:-1:exon

position:461431:-1
position: 461431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461592:-1
position: 461592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:460640-460786:-1:exon

position:460640:-1
position: 460640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460786:-1
position: 460786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:460438-460565:-1:exon

position:460438:-1
position: 460438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460565:-1
position: 460565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:460159-460358:-1:exon

position:460159:-1
position: 460159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460358:-1
position: 460358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:459623-459941:-1:exon

position:459941:-1
position: 459941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GLUL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GLUL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamine synthetase
translation: MSTSASSHLNKGVKQVYMGLPQGEKVQALYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTFQSEGSNSDMYLIPAAMFRDPFRKDPNKLVFCEVLKYNRKPAESNLRYTCKHIMDMVSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKIAGTNAEVMPAQWEFQIGPCEGIHMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKHIEEAIEKLSRRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIPRAVGQERRGYFEDRRPSANCDPFAVTEALVRTCLLNETGDEPFQYKN
SIO_010081: GLUL
subclass of: SO_0000673
so part of: GLUL
location: complement(join(459623..459941,460159..460358,460438..460565,460640..460786,461431..461592,462020..462185))
location: region:459623-462185:-1
so has part: feature:462020-462185:-1:exon
so has part: feature:461431-461592:-1:exon
so has part: feature:460640-460786:-1:exon
so has part: feature:460438-460565:-1:exon
so has part: feature:460159-460358:-1:exon
so has part: feature:459623-459941:-1:exon

XP_004578892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462020-462185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:461431-461592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460640-460786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460438-460565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:460159-460358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459623-459941:-1:exon

LOC101525570
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101525570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(467289..468197)
location: region:467289-468197:-1
so has part: feature:467289-468197:-1:exon
subclass of: SO_0000010

101525570
type: Gene
SIO_000068: ncbigene

position:467289:-1
position: 467289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468197:-1
position: 468197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467289-468197:-1:exon

LOC101525570
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101525570
product: transmembrane epididymal protein 1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_004578989.1
SIO_010081: LOC101525570
subclass of: SO_0000673
so part of: LOC101525570
location: complement(467289..468197)
location: region:467289-468197:-1
so has part: feature:467289-468197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:467289-468197:-1:exon

LOC101525570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101525570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane epididymal protein 1A-like
translation: MGNFGGHVYPGFFLVLYSLHQAAMVSKELIAGNHIQQSPHAARSQGRWAWLWTVSYTGVLKTVAGSLLMVYEVNCVEGGLVLMDRGLPPRFMYPQEWQHLTMFTLLALLGCVELVSKHLLPYRCLALEQGALALSFHELLLLLASHVKESSGVELQVHILLILVVLLLVLVLTAQLWAPHTCCLRVIQTFLFLLMGSWLMQAGFILYRPVSGYPWQDDDISDIMFVTTFFCWHVMGDALCLLGVHGLSLLWLRCRSLGLKPSPVGAPGPHYVLLREGVQPETEEQALLVQMQPETGPGLPRP
SIO_010081: LOC101525570
subclass of: SO_0000673
so part of: LOC101525570
location: complement(467289..468197)
location: region:467289-468197:-1
so has part: feature:467289-468197:-1:exon

XP_004579046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467289-468197:-1:exon

LOC101525327
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101525327
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(479579..480487)
location: region:479579-480487:-1
so has part: feature:479579-480487:-1:exon
subclass of: SO_0000010

101525327
type: Gene
SIO_000068: ncbigene

position:479579:-1
position: 479579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480487:-1
position: 480487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479579-480487:-1:exon

LOC101525327
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101525327
product: transmembrane epididymal protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_004578988.1
SIO_010081: LOC101525327
subclass of: SO_0000673
so part of: LOC101525327
location: complement(479579..480487)
location: region:479579-480487:-1
so has part: feature:479579-480487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:479579-480487:-1:exon

LOC101525327
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101525327
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane epididymal protein 1-like
translation: MGKFNGHFFPGLYLFYHGLHQAAMVSNALTSGNHIQQPVQVPRSQGRWAWLWTVSYTGVLKTVAGLTLTLYVVFCLDDGMVLMDRGLPPRFMYPQEWQHLTMFTLLALLGCVELVSKHLLPYRCLALEQGALALSFHELLLLLASHVKESSGVELQVHILLILVVLLLVLVLTAQLWAPHTCCLRVIQTFLFLLMGSWLMQAGFILYRPVSGYPWQDDDISDIMFVTTFFCWHVMGDALCLLGVHGLSLLWLRCRSLGLKPSPVGAPGPHYVLLREGVQPETEEQALLVQMQPETGPGLPRP
SIO_010081: LOC101525327
subclass of: SO_0000673
so part of: LOC101525327
location: complement(479579..480487)
location: region:479579-480487:-1
so has part: feature:479579-480487:-1:exon

XP_004579045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479579-480487:-1:exon

LOC101525084
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101525084
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 507717..508565
location: region:507717-508565:1
so has part: feature:507717-508565:1:exon
subclass of: SO_0000010

101525084
type: Gene
SIO_000068: ncbigene

position:507717:1
position: 507717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508565:1
position: 508565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507717-508565:1:exon

LOC101525084
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101525084
product: transmembrane epididymal protein 1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_004578987.1
SIO_010081: LOC101525084
subclass of: SO_0000673
so part of: LOC101525084
location: 507717..508565
location: region:507717-508565:1
so has part: feature:507717-508565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507717-508565:1:exon

LOC101525084
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101525084
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane epididymal protein 1A-like
translation: MGGFEGHLYPGLSFFLYGLHHAQLFSRALICNSPAQHPPCGARGRGPWARLWQVCDVGLVKILSACILVAQELHSLPRPFALLTKRYHQRDFLFRKQWQHITLYAAFLLSGCVDMTSQHVLACRCVALEQGAQALGMAVLLPLMLSHMQDTEGVELRSHLLLTQVMFLLTLVLTAELWVPSELRLRALKAFLCALSGSWLMQLAFMLYRPMSGYKWMDDDHNDLAFVTTAFCCHVTCVAILMLWIHGCCWVWYGYISATARAGQVQPRGAHGSTCSSSQLLP
SIO_010081: LOC101525084
subclass of: SO_0000673
so part of: LOC101525084
location: 507717..508565
location: region:507717-508565:1
so has part: feature:507717-508565:1:exon

XP_004579044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507717-508565:1:exon

RGSL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RGSL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 515578..542357
location: region:515578-542357:1
so has part: feature:515578-542357:1:exon
subclass of: SO_0000010

101524848
type: Gene
SIO_000068: ncbigene

position:515578:1
position: 515578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542357:1
position: 542357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515578-542357:1:exon

RGSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RGSL1
product: regulator of G protein signaling like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_036495274.1
SIO_010081: RGSL1
subclass of: SO_0000673
so part of: RGSL1
location: join(515578..515590,517223..517320,520843..520917,521869..521998,524409..524513,525175..525336,525882..526813,529746..529808,530642..530864,532613..532720,534438..534540,534722..534915,535221..535338,535424..535556,536045..536174,536870..537041,538143..538281,538387..538511,538840..538946,541411..541503,541855..541921,542204..542357)
location: region:515578-542357:1
so has part: feature:515578-515590:1:exon
so has part: feature:517223-517320:1:exon
so has part: feature:520843-520917:1:exon
so has part: feature:521869-521998:1:exon
so has part: feature:524409-524513:1:exon
so has part: feature:525175-525336:1:exon
so has part: feature:525882-526813:1:exon
so has part: feature:529746-529808:1:exon
so has part: feature:530642-530864:1:exon
so has part: feature:532613-532720:1:exon
so has part: feature:534438-534540:1:exon
so has part: feature:534722-534915:1:exon
so has part: feature:535221-535338:1:exon
so has part: feature:535424-535556:1:exon
so has part: feature:536045-536174:1:exon
so has part: feature:536870-537041:1:exon
so has part: feature:538143-538281:1:exon
so has part: feature:538387-538511:1:exon
so has part: feature:538840-538946:1:exon
so has part: feature:541411-541503:1:exon
so has part: feature:541855-541921:1:exon
so has part: feature:542204-542357:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:515578-515590:1:exon

position:515590:1
position: 515590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:517223-517320:1:exon

position:517223:1
position: 517223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517320:1
position: 517320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:520843-520917:1:exon

position:520843:1
position: 520843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520917:1
position: 520917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:521869-521998:1:exon

position:521869:1
position: 521869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521998:1
position: 521998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:524409-524513:1:exon

position:524409:1
position: 524409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524513:1
position: 524513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:525175-525336:1:exon

position:525175:1
position: 525175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525336:1
position: 525336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:525882-526813:1:exon

position:525882:1
position: 525882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526813:1
position: 526813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:529746-529808:1:exon

position:529746:1
position: 529746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529808:1
position: 529808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:530642-530864:1:exon

position:530642:1
position: 530642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530864:1
position: 530864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:532613-532720:1:exon

position:532613:1
position: 532613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532720:1
position: 532720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:534438-534540:1:exon

position:534438:1
position: 534438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534540:1
position: 534540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:534722-534915:1:exon

position:534722:1
position: 534722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534915:1
position: 534915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:535221-535338:1:exon

position:535221:1
position: 535221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535338:1
position: 535338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:535424-535556:1:exon

position:535424:1
position: 535424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535556:1
position: 535556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:536045-536174:1:exon

position:536045:1
position: 536045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536174:1
position: 536174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:536870-537041:1:exon

position:536870:1
position: 536870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537041:1
position: 537041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:538143-538281:1:exon

position:538143:1
position: 538143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538281:1
position: 538281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:538387-538511:1:exon

position:538387:1
position: 538387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538511:1
position: 538511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:538840-538946:1:exon

position:538840:1
position: 538840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538946:1
position: 538946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:541411-541503:1:exon

position:541411:1
position: 541411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541503:1
position: 541503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:541855-541921:1:exon

position:541855:1
position: 541855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541921:1
position: 541921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:542204-542357:1:exon

position:542204:1
position: 542204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RGSL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RGSL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling protein-like
translation: MSNAALSLAELIKSTNLIILLEDEIFADFFNTFLSLPVFGQTPFYTVENSQWSLWPNIPYDLIVKYKGLLTWLEKYRLPFFCKTNLCFHYILCQELIGFVKSPEGAKMMRWKTADQWLLQKCTAGVRGMWRFCSYLKGSAGEELVDFWTLAEEILSLDETDPEVEDHYLSLLLALKATHLQEGSRVATLCNVNIKSLLNLSIWHPTQSVSRRETLGHMQKVALFKLQSYWLPNFYTHAKAQLAQQEACRGLMQEYETRLCSLCCAHAGSVPLNMSIQKGLYAQRRYSSHHAKRKLWQLLDSGCWSLEMDLQPDARPIPPRERPVPQAPSSKDRATDKELAYGWKASVRCRATGRLHMAGLLETLCCSHLRTDTPIISHSSQTLTIRGAPGHSRSCGCTHWALCADACAGGPFRDFLKKLNLKVEAQLLDLWQDLHSFLGVLTSSRKTGKAVFRHVLCNRICQLYLSEHSHPHLPLKPQTLQGLRELLPAGDVNPWIPRAQMEICQALSPWYEEFLNEEDYWFLNFTTQSRLVKSKWRKTESADGEESSFLCRRLQEALLLSQALAHLEEREAAEWQRLATEDLRQGGSLQVEVSSPVFLADFSKMTFQELCSKNPKLAIEKISADYRAYCEKAPPKDFTMAIVREPKKAPAPRKLSFYRKAGLRKPSVRPRNLTEILLNPQHLDFFREFLRERRAESPLQFLVAVQKLSTETSEKLYKLSLENIIKTFFHGKLPPEEMLQCNVPILREIANMRRVSTTTLLMLQGHVTKSLEEKWLKEYQDLFPGRPQETDVDMPSAPCKPSKVTTAATVTSSYFQDSQKRGWMKMVSFIKSFCKYRRFMADASRRQAFEDYLHLEMYNHKENFTSPNVAGRPTFLSPSTRSADQENGEPGLAKRRIFGHRIITINFAINDLYFFSEMEKFNELVNSAHKLCGSRTPSENDVVLLRNKASVVIKLFLNSDIPPKLRVNISEAQKDAVLTAFNEGHLDRSIFHGAIMSVFPVLMYFWKRFCSWKAVRSYLEYRGHRLKDRNPPKPSYKYPPWSGGDHAVLRFSLLRGVEWLRPQQREVTSSPAQNSSSSNLTQMRLVLSSVQLCSVPGRDHDSLRTGPRGASLEMTTVSESGSGMALLTPVTLFILRQKLPHSRKEKK
SIO_010081: RGSL1
subclass of: SO_0000673
so part of: RGSL1
location: join(515578..515590,517223..517320,520843..520917,521869..521998,524409..524513,525175..525336,525882..526813,529746..529808,530642..530864,532613..532720,534438..534540,534722..534915,535221..535338,535424..535556,536045..536174,536870..537041,538143..538281,538387..538511,538840..538946,541411..541503,541855..541921,542204..542357)
location: region:515578-542357:1
so has part: feature:515578-515590:1:exon
so has part: feature:517223-517320:1:exon
so has part: feature:520843-520917:1:exon
so has part: feature:521869-521998:1:exon
so has part: feature:524409-524513:1:exon
so has part: feature:525175-525336:1:exon
so has part: feature:525882-526813:1:exon
so has part: feature:529746-529808:1:exon
so has part: feature:530642-530864:1:exon
so has part: feature:532613-532720:1:exon
so has part: feature:534438-534540:1:exon
so has part: feature:534722-534915:1:exon
so has part: feature:535221-535338:1:exon
so has part: feature:535424-535556:1:exon
so has part: feature:536045-536174:1:exon
so has part: feature:536870-537041:1:exon
so has part: feature:538143-538281:1:exon
so has part: feature:538387-538511:1:exon
so has part: feature:538840-538946:1:exon
so has part: feature:541411-541503:1:exon
so has part: feature:541855-541921:1:exon
so has part: feature:542204-542357:1:exon

XP_036351167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515578-515590:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517223-517320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520843-520917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521869-521998:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:524409-524513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:525175-525336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:525882-526813:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:529746-529808:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:530642-530864:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:532613-532720:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534438-534540:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:534722-534915:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:535221-535338:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:535424-535556:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536045-536174:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:536870-537041:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:538143-538281:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:538387-538511:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:538840-538946:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:541411-541503:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:541855-541921:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542204-542357:1:exon

RNASEL
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RNASEL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(545719..550165)
location: region:545719-550165:-1
so has part: feature:545719-550165:-1:exon
subclass of: SO_0000010

101524605
type: Gene
SIO_000068: ncbigene

position:545719:-1
position: 545719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550165:-1
position: 550165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545719-550165:-1:exon

RNASEL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RNASEL
product: ribonuclease L
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_004578985.1
SIO_010081: RNASEL
subclass of: SO_0000673
so part of: RNASEL
location: complement(join(545719..545908,546108..546244,546705..546837,546926..547131,547387..547481,548746..550165))
location: region:545719-550165:-1
so has part: feature:548746-550165:-1:exon
so has part: feature:547387-547481:-1:exon
so has part: feature:546926-547131:-1:exon
so has part: feature:546705-546837:-1:exon
so has part: feature:546108-546244:-1:exon
so has part: feature:545719-545908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548746-550165:-1:exon

position:548746:-1
position: 548746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547387-547481:-1:exon

position:547387:-1
position: 547387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547481:-1
position: 547481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:546926-547131:-1:exon

position:546926:-1
position: 546926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547131:-1
position: 547131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:546705-546837:-1:exon

position:546705:-1
position: 546705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546837:-1
position: 546837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:546108-546244:-1:exon

position:546108:-1
position: 546108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546244:-1
position: 546244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:545719-545908:-1:exon

position:545908:-1
position: 545908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNASEL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RNASEL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-5A-dependent ribonuclease
translation: MDTKDTGLALKLAVEAGDLQQVRRLLESGADANFQEQQNGWSPLHSAVQRDRADLVELLLAHRADPCLRKHNGATALIIAGMEGNVQVLQLLLDAGADVNERDLHGFTALMEAAGRGHVEALRFLHSRGAQVNMARDPPTERQALRQGGATALMDAAEGGHVEAVRALLEMGAEVAARDLRLRGALEHALLKGPEERAEDTVRLLLHHGADVNARDAEGKTPLILAVEKRRRLGLVRLLLEQRHVDLDSKDHEGRTALQVAVELGLGEVARLLCHKGARVDYGDLVAKAMKNYDNDLARFLLGQGAPEPAPPPTPTWRPRSLRWGRALSRLHGSNRKLINKLKICPDKEYKIADTQGGGVYLGLLEDQEVAVKVFVQGSECAGRELSALKSGQDSSRLVTLLACESHEANLYVCMTLCEWTLEEFLEHRPQPAQGDEDKWARQVLHSVFEAVRELHLQRAHAHQDLQPQNILIDAAHGIRLADFDQSVQLAEPTKVSQAVRTDLQALGRLVVYVLLKGDVPFEQLSAMHHRKVWRLCLERETRDLTRCLLTPQQAQEDPLGSLLGHPFFWEWQSRYRTLRNVGNESDIKRCNLRGAIVQLLSLKPSEHSLSFAQWTSKVDSLVLGQMNDFYKNKPHLCYTDSVQDLLRFIRNIGEHIDEDCNREMKARLGDPAIYFLRTFPDLLMHVYKQLQDSEFRRHFPQLPLPAGPGVLETEVPGGQALGADP
SIO_010081: RNASEL
subclass of: SO_0000673
so part of: RNASEL
location: complement(join(545719..545908,546108..546244,546705..546837,546926..547131,547387..547481,548746..550165))
location: region:545719-550165:-1
so has part: feature:548746-550165:-1:exon
so has part: feature:547387-547481:-1:exon
so has part: feature:546926-547131:-1:exon
so has part: feature:546705-546837:-1:exon
so has part: feature:546108-546244:-1:exon
so has part: feature:545719-545908:-1:exon

XP_004579042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548746-550165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547387-547481:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546926-547131:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:546705-546837:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:546108-546244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545719-545908:-1:exon

LOC101519905
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101519905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(565385..574176)
location: region:565385-574176:-1
so has part: feature:565385-574176:-1:exon
subclass of: SO_0000010

101519905
type: Gene
SIO_000068: ncbigene

position:565385:-1
position: 565385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574176:-1
position: 574176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565385-574176:-1:exon

LOC101519905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101519905
product: regulator of G-protein signaling 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XM_004578834.1
SIO_010081: LOC101519905
subclass of: SO_0000673
so part of: LOC101519905
location: complement(join(565385..565567,565714..565880,571969..572033,572481..572582,574151..574176))
location: region:565385-574176:-1
so has part: feature:574151-574176:-1:exon
so has part: feature:572481-572582:-1:exon
so has part: feature:571969-572033:-1:exon
so has part: feature:565714-565880:-1:exon
so has part: feature:565385-565567:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:574151-574176:-1:exon

position:574151:-1
position: 574151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:572481-572582:-1:exon

position:572481:-1
position: 572481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572582:-1
position: 572582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:571969-572033:-1:exon

position:571969:-1
position: 571969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572033:-1
position: 572033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:565714-565880:-1:exon

position:565714:-1
position: 565714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565880:-1
position: 565880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:565385-565567:-1:exon

position:565567:-1
position: 565567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101519905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101519905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 8
translation: MAALLMPRRSKGMRTRLGCLSHKSDSCSDFTAILPDKPSRALKRLSTEEAARWADSFDVLLAHKYGVAAFRAFLKTEFSEENLEFWLACEDFKRTRSAAKLASRAHRIFEEFVDVQAPREVNIDFQTREATRKNMEEPSLSCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS
SIO_010081: LOC101519905
subclass of: SO_0000673
so part of: LOC101519905
location: complement(join(565385..565567,565714..565880,571969..572033,572481..572582,574151..574176))
location: region:565385-574176:-1
so has part: feature:574151-574176:-1:exon
so has part: feature:572481-572582:-1:exon
so has part: feature:571969-572033:-1:exon
so has part: feature:565714-565880:-1:exon
so has part: feature:565385-565567:-1:exon

XP_004578891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:574151-574176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572481-572582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571969-572033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565714-565880:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:565385-565567:-1:exon

NPL
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: NPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 603057..615396
location: region:603057-615396:1
so has part: feature:603057-615396:1:exon
subclass of: SO_0000010

101524142
type: Gene
SIO_000068: ncbigene

position:603057:1
position: 603057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615396:1
position: 615396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603057-615396:1:exon

NPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: NPL
product: N-acetylneuraminate pyruvate lyase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_036495266.1
SIO_010081: NPL
subclass of: SO_0000673
so part of: NPL
location: join(603057..603121,605625..605698,607205..607292,608812..608869,609591..609666,610901..610993,611982..612130,612250..612296,615357..615396)
location: region:603057-615396:1
so has part: feature:603057-603121:1:exon
so has part: feature:605625-605698:1:exon
so has part: feature:607205-607292:1:exon
so has part: feature:608812-608869:1:exon
so has part: feature:609591-609666:1:exon
so has part: feature:610901-610993:1:exon
so has part: feature:611982-612130:1:exon
so has part: feature:612250-612296:1:exon
so has part: feature:615357-615396:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:603057-603121:1:exon

position:603121:1
position: 603121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:605625-605698:1:exon

position:605625:1
position: 605625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605698:1
position: 605698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:607205-607292:1:exon

position:607205:1
position: 607205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607292:1
position: 607292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:608812-608869:1:exon

position:608812:1
position: 608812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608869:1
position: 608869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:609591-609666:1:exon

position:609591:1
position: 609591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609666:1
position: 609666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:610901-610993:1:exon

position:610901:1
position: 610901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610993:1
position: 610993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:611982-612130:1:exon

position:611982:1
position: 611982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612130:1
position: 612130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:612250-612296:1:exon

position:612250:1
position: 612250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612296:1
position: 612296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:615357-615396:1:exon

position:615357:1
position: 615357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: NPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetylneuraminate lyase
translation: MAFQKQLRGLVAATVTPMTENGDVNLPVVARYVDYLVKEQGIRSVFVNGTTGEGLSLSISERRQVAEEWVAQGRSKLDQVVIHVGALSLKESQELAQHAAGIGADGIAVIAPFFLKPCSKDALVSFLKEVAAAAPNVPFYYYHIPALTGVRIRAEELLDSIQDQIPSFQGLKFSDTDLLDFGQCVDQHGPRQLALLFGVDEQLLGALAMGATGAVGSFVSRGSSTLWLS
SIO_010081: NPL
subclass of: SO_0000673
so part of: NPL
location: join(603057..603121,605625..605698,607205..607292,608812..608869,609591..609666,610901..610993,611982..612130,612250..612296,615357..615396)
location: region:603057-615396:1
so has part: feature:603057-603121:1:exon
so has part: feature:605625-605698:1:exon
so has part: feature:607205-607292:1:exon
so has part: feature:608812-608869:1:exon
so has part: feature:609591-609666:1:exon
so has part: feature:610901-610993:1:exon
so has part: feature:611982-612130:1:exon
so has part: feature:612250-612296:1:exon
so has part: feature:615357-615396:1:exon

XP_036351159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:603057-603121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:605625-605698:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:607205-607292:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608812-608869:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:609591-609666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610901-610993:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611982-612130:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:612250-612296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:615357-615396:1:exon

LOC101523901
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101523901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 625593..626744
location: region:625593-626744:1
so has part: feature:625593-626744:1:exon
subclass of: SO_0000010

101523901
type: Gene
SIO_000068: ncbigene

position:625593:1
position: 625593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626744:1
position: 626744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625593-626744:1:exon

LOC101523901
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101523901
product: ATP-dependent RNA helicase A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_004578982.1
SIO_010081: LOC101523901
subclass of: SO_0000673
so part of: LOC101523901
location: join(625593..625703,626201..626341,626667..626744)
location: region:625593-626744:1
so has part: feature:625593-625703:1:exon
so has part: feature:626201-626341:1:exon
so has part: feature:626667-626744:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:625593-625703:1:exon

position:625703:1
position: 625703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626201-626341:1:exon

position:626201:1
position: 626201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626341:1
position: 626341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:626667-626744:1:exon

position:626667:1
position: 626667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101523901
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101523901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase A-like
translation: MGDVKDFLYAWCGKRKMTPSYEIRAVGNKNRQKFMCEVRVEGYNYTGMGNSTNKKDAQSNAARDFLNYLVRINQVRSEDVPAMGTARLRLRLELMLAFLQTELRIRVLL
SIO_010081: LOC101523901
subclass of: SO_0000673
so part of: LOC101523901
location: join(625593..625703,626201..626341,626667..626744)
location: region:625593-626744:1
so has part: feature:625593-625703:1:exon
so has part: feature:626201-626341:1:exon
so has part: feature:626667-626744:1:exon

XP_004579039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:625593-625703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626201-626341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626667-626744:1:exon

LOC101519658
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101519658
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 638684..680035
location: region:638684-680035:1
so has part: feature:638684-680035:1:exon
subclass of: SO_0000010

101519658
type: Gene
SIO_000068: ncbigene

position:638684:1
position: 638684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680035:1
position: 680035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638684-680035:1:exon

LOC101519658
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101519658
product: DExH-box helicase 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578833.2
SIO_010081: LOC101519658
subclass of: SO_0000673
so part of: LOC101519658
location: join(638684..638794,639292..639432,651366..651480,652314..652426,653281..653429,655519..655565,657856..657992,658293..658382,658473..658634,658712..658789,659233..659424,662774..662915,663283..663365,668389..668545,670061..670161,671072..671285,671446..671540,671733..671806,672462..672614,673726..673886,674465..674576,675132..675293,675392..675519,676207..676436,676850..676965,677487..677687,679433..680035)
location: region:638684-680035:1
so has part: feature:638684-638794:1:exon
so has part: feature:639292-639432:1:exon
so has part: feature:651366-651480:1:exon
so has part: feature:652314-652426:1:exon
so has part: feature:653281-653429:1:exon
so has part: feature:655519-655565:1:exon
so has part: feature:657856-657992:1:exon
so has part: feature:658293-658382:1:exon
so has part: feature:658473-658634:1:exon
so has part: feature:658712-658789:1:exon
so has part: feature:659233-659424:1:exon
so has part: feature:662774-662915:1:exon
so has part: feature:663283-663365:1:exon
so has part: feature:668389-668545:1:exon
so has part: feature:670061-670161:1:exon
so has part: feature:671072-671285:1:exon
so has part: feature:671446-671540:1:exon
so has part: feature:671733-671806:1:exon
so has part: feature:672462-672614:1:exon
so has part: feature:673726-673886:1:exon
so has part: feature:674465-674576:1:exon
so has part: feature:675132-675293:1:exon
so has part: feature:675392-675519:1:exon
so has part: feature:676207-676436:1:exon
so has part: feature:676850-676965:1:exon
so has part: feature:677487-677687:1:exon
so has part: feature:679433-680035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:638684-638794:1:exon

position:638794:1
position: 638794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:639292-639432:1:exon

position:639292:1
position: 639292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639432:1
position: 639432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:651366-651480:1:exon

position:651366:1
position: 651366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651480:1
position: 651480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:652314-652426:1:exon

position:652314:1
position: 652314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652426:1
position: 652426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:653281-653429:1:exon

position:653281:1
position: 653281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653429:1
position: 653429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:655519-655565:1:exon

position:655519:1
position: 655519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655565:1
position: 655565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:657856-657992:1:exon

position:657856:1
position: 657856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657992:1
position: 657992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:658293-658382:1:exon

position:658293:1
position: 658293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658382:1
position: 658382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:658473-658634:1:exon

position:658473:1
position: 658473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658634:1
position: 658634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:658712-658789:1:exon

position:658712:1
position: 658712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658789:1
position: 658789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:659233-659424:1:exon

position:659233:1
position: 659233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659424:1
position: 659424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:662774-662915:1:exon

position:662774:1
position: 662774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662915:1
position: 662915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:663283-663365:1:exon

position:663283:1
position: 663283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663365:1
position: 663365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:668389-668545:1:exon

position:668389:1
position: 668389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668545:1
position: 668545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:670061-670161:1:exon

position:670061:1
position: 670061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670161:1
position: 670161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:671072-671285:1:exon

position:671072:1
position: 671072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671285:1
position: 671285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:671446-671540:1:exon

position:671446:1
position: 671446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671540:1
position: 671540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:671733-671806:1:exon

position:671733:1
position: 671733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671806:1
position: 671806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:672462-672614:1:exon

position:672462:1
position: 672462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672614:1
position: 672614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:673726-673886:1:exon

position:673726:1
position: 673726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673886:1
position: 673886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:674465-674576:1:exon

position:674465:1
position: 674465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674576:1
position: 674576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:675132-675293:1:exon

position:675132:1
position: 675132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675293:1
position: 675293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:675392-675519:1:exon

position:675392:1
position: 675392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675519:1
position: 675519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:676207-676436:1:exon

position:676207:1
position: 676207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676436:1
position: 676436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:676850-676965:1:exon

position:676850:1
position: 676850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676965:1
position: 676965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:677487-677687:1:exon

position:677487:1
position: 677487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677687:1
position: 677687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:679433-680035:1:exon

position:679433:1
position: 679433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101519658
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101519658
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase A
translation: MGDVKDFLYAWCGKRKMTPSYEIRAVGNKNRQKFMCEVRVEGYNYTGMGNSTNKKDAQSNAARDFLNYLVRINQVRSEDVPAMGLAPPLPTLTDGPNSNMANAGGLPTTMGGPLPPHLALKAENNSGVGASGYGPPGPTWDRGANLKDYYSKKEEQEVQATLESEEVDLNAGLHGNWTLENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHLGVIEPYSGLTKKKEGETVEPYIVNLSQDLELQLQNTVQELNLEVVPPPHDPSMPVVLNIGKLAHFEPSQRQNHVGVVPWSPPQSNWNPWTSSNIDEGPLAYATPEQISMDLKNELMYQLEQDQDLQAVLQERTLLPVKKFEDEILDAISQNSVVIIRGATGCGKTTQVPQFILDDFIQSGRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVRAYPEVRIVLMSATIDTSMFCEYFFHCPIIEVYGRTYPVQEYFLEDCIQMTQFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEYGPETRLSMAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPNGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRLGKMMIMGCIFYVGDAVCTISAATCFPEPFINEGKRLGYVHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCDHKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSDGQIVLVDDWIRLQMSHEAAACITALRAAMEALVVEVTKQPSIIGQLDPANEHMLNTIRQISRPSAAGISLMVGSTRYGDGPRPPKMARYDNGGGYRRGGSGYGGGGYGSSYGGGGSYGGGYGGGGGYRGGARGGFRGGSGGDYRGPGRGGYRGGGGFQRGGGRGAYGGGYFGQGRGGGGY
SIO_010081: LOC101519658
subclass of: SO_0000673
so part of: LOC101519658
location: join(638684..638794,639292..639432,651366..651480,652314..652426,653281..653429,655519..655565,657856..657992,658293..658382,658473..658634,658712..658789,659233..659424,662774..662915,663283..663365,668389..668545,670061..670161,671072..671285,671446..671540,671733..671806,672462..672614,673726..673886,674465..674576,675132..675293,675392..675519,676207..676436,676850..676965,677487..677687,679433..679748)
location: region:638684-679748:1
so has part: feature:638684-638794:1:exon
so has part: feature:639292-639432:1:exon
so has part: feature:651366-651480:1:exon
so has part: feature:652314-652426:1:exon
so has part: feature:653281-653429:1:exon
so has part: feature:655519-655565:1:exon
so has part: feature:657856-657992:1:exon
so has part: feature:658293-658382:1:exon
so has part: feature:658473-658634:1:exon
so has part: feature:658712-658789:1:exon
so has part: feature:659233-659424:1:exon
so has part: feature:662774-662915:1:exon
so has part: feature:663283-663365:1:exon
so has part: feature:668389-668545:1:exon
so has part: feature:670061-670161:1:exon
so has part: feature:671072-671285:1:exon
so has part: feature:671446-671540:1:exon
so has part: feature:671733-671806:1:exon
so has part: feature:672462-672614:1:exon
so has part: feature:673726-673886:1:exon
so has part: feature:674465-674576:1:exon
so has part: feature:675132-675293:1:exon
so has part: feature:675392-675519:1:exon
so has part: feature:676207-676436:1:exon
so has part: feature:676850-676965:1:exon
so has part: feature:677487-677687:1:exon
so has part: feature:679433-679748:1:exon

XP_004578890.1
type: Protein
SIO_000068: ncbiprotein

position:679748:1
position: 679748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638684-638794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639292-639432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651366-651480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:652314-652426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:653281-653429:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:655519-655565:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:657856-657992:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658293-658382:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:658473-658634:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:658712-658789:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:659233-659424:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:662774-662915:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:663283-663365:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:668389-668545:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:670061-670161:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:671072-671285:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:671446-671540:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:671733-671806:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:672462-672614:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:673726-673886:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:674465-674576:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:675132-675293:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:675392-675519:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:676207-676436:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:676850-676965:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:677487-677687:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:679433-679748:1:exon

SHCBP1L
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SHCBP1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(681719..698120)
location: region:681719-698120:-1
so has part: feature:681719-698120:-1:exon
subclass of: SO_0000010

101523659
type: Gene
SIO_000068: ncbigene

position:681719:-1
position: 681719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698120:-1
position: 698120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681719-698120:-1:exon

SHCBP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SHCBP1L
product: SHC binding and spindle associated 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578981.3
SIO_010081: SHCBP1L
subclass of: SO_0000673
so part of: SHCBP1L
location: complement(join(681719..682019,683229..683351,683978..684228,685142..685295,686795..686900,689232..689450,689518..689604,690331..690545,696114..696263,697764..698120))
location: region:681719-698120:-1
so has part: feature:697764-698120:-1:exon
so has part: feature:696114-696263:-1:exon
so has part: feature:690331-690545:-1:exon
so has part: feature:689518-689604:-1:exon
so has part: feature:689232-689450:-1:exon
so has part: feature:686795-686900:-1:exon
so has part: feature:685142-685295:-1:exon
so has part: feature:683978-684228:-1:exon
so has part: feature:683229-683351:-1:exon
so has part: feature:681719-682019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:697764-698120:-1:exon

position:697764:-1
position: 697764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:696114-696263:-1:exon

position:696114:-1
position: 696114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696263:-1
position: 696263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:690331-690545:-1:exon

position:690331:-1
position: 690331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690545:-1
position: 690545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:689518-689604:-1:exon

position:689518:-1
position: 689518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689604:-1
position: 689604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:689232-689450:-1:exon

position:689232:-1
position: 689232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689450:-1
position: 689450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:686795-686900:-1:exon

position:686795:-1
position: 686795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686900:-1
position: 686900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:685142-685295:-1:exon

position:685142:-1
position: 685142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685295:-1
position: 685295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:683978-684228:-1:exon

position:683978:-1
position: 683978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684228:-1
position: 684228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:683229-683351:-1:exon

position:683229:-1
position: 683229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683351:-1
position: 683351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:681719-682019:-1:exon

position:682019:-1
position: 682019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SHCBP1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SHCBP1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testicular spindle-associated protein SHCBP1L
translation: MASGLRAAGLEDPLRVLNPGEEVVSAAPVRSVVAAPRPVKGRAGREAVRRRLQPPGAPAAERPGEVAEPEPGEAAVGWRPAGPAEEARPLPAVCASPLRGMWRAEKVALYCDVVLLGCQAEDVDEAMSKYLSERLKLKETWLGVWKTNPELFFVKFEETSIPFVGILVEVTCQLRQSSSPCFKVSVSVAEPFASNIANIPREVVDETLEELGHSVPLLEVYPVEGQDAAVDDIALALEVARFFYDFLWRDWDEEESCENYTALIEERINLWCDIQDGTIPGPIAQRFRKTLEKYKSKRAELIEYQGGIKEDPSAAEAVECWKKYYEIVMLCSLLKMWEDLRLRVHGPFFPRILRRRKGKRDLGKTITHIVAKVMTTDMVKGLSADTLLQQHGDLDVALDSCYSGDTVVIFPGEYQASNLAVLTEDIVIKGVGRREEIIITSEPSHDSFVVSKADNVKLTHLSLVQQGTVDGIVVVESGHMTLQNCVLKCEGTGVCVLTGAALTVTDSEITGAQGAGVELYPGSTAVLERNEIHHCNDLRSSDSAQCALGGVSVKVLPAPRLKMANNHIHSNSGYGVSILQPTGQLLIVDALGNGAASGDTKDDQVLGKVMQNLDLEMSNNKLEDNLKGDIQVVAS
SIO_010081: SHCBP1L
subclass of: SO_0000673
so part of: SHCBP1L
location: complement(join(681774..682019,683229..683351,683978..684228,685142..685295,686795..686900,689232..689450,689518..689604,690331..690545,696114..696263,697764..698120))
location: region:681774-698120:-1
so has part: feature:697764-698120:-1:exon
so has part: feature:696114-696263:-1:exon
so has part: feature:690331-690545:-1:exon
so has part: feature:689518-689604:-1:exon
so has part: feature:689232-689450:-1:exon
so has part: feature:686795-686900:-1:exon
so has part: feature:685142-685295:-1:exon
so has part: feature:683978-684228:-1:exon
so has part: feature:683229-683351:-1:exon
so has part: feature:681774-682019:-1:exon

XP_004579038.1
type: Protein
SIO_000068: ncbiprotein

position:681774:-1
position: 681774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697764-698120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696114-696263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690331-690545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689518-689604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689232-689450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:686795-686900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:685142-685295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:683978-684228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:683229-683351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:681774-682019:-1:exon

LAMC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LAMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 729558..779440
location: region:729558-779440:1
so has part: feature:729558-779440:1:exon
subclass of: SO_0000010

101523409
type: Gene
SIO_000068: ncbigene

position:729558:1
position: 729558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779440:1
position: 779440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729558-779440:1:exon

LAMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LAMC1
product: laminin subunit gamma 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_004578980.3
SIO_010081: LAMC1
subclass of: SO_0000673
so part of: LAMC1
location: join(729558..729936,756759..757063,757720..757850,758488..758654,759395..759583,760052..760169,760402..760500,760588..760724,760886..761008,761118..761307,761393..761505,762815..763036,763113..763301,764889..765134,765396..765549,766080..766222,766356..766534,767160..767316,772312..772427,773101..773180,773960..774097,774685..774829,775572..775721,775799..775913,776301..776500,776937..777095,778832..778931,779184..779440)
location: region:729558-779440:1
so has part: feature:729558-729936:1:exon
so has part: feature:756759-757063:1:exon
so has part: feature:757720-757850:1:exon
so has part: feature:758488-758654:1:exon
so has part: feature:759395-759583:1:exon
so has part: feature:760052-760169:1:exon
so has part: feature:760402-760500:1:exon
so has part: feature:760588-760724:1:exon
so has part: feature:760886-761008:1:exon
so has part: feature:761118-761307:1:exon
so has part: feature:761393-761505:1:exon
so has part: feature:762815-763036:1:exon
so has part: feature:763113-763301:1:exon
so has part: feature:764889-765134:1:exon
so has part: feature:765396-765549:1:exon
so has part: feature:766080-766222:1:exon
so has part: feature:766356-766534:1:exon
so has part: feature:767160-767316:1:exon
so has part: feature:772312-772427:1:exon
so has part: feature:773101-773180:1:exon
so has part: feature:773960-774097:1:exon
so has part: feature:774685-774829:1:exon
so has part: feature:775572-775721:1:exon
so has part: feature:775799-775913:1:exon
so has part: feature:776301-776500:1:exon
so has part: feature:776937-777095:1:exon
so has part: feature:778832-778931:1:exon
so has part: feature:779184-779440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:729558-729936:1:exon

position:729936:1
position: 729936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:756759-757063:1:exon

position:756759:1
position: 756759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757063:1
position: 757063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:757720-757850:1:exon

position:757720:1
position: 757720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757850:1
position: 757850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:758488-758654:1:exon

position:758488:1
position: 758488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758654:1
position: 758654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:759395-759583:1:exon

position:759395:1
position: 759395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759583:1
position: 759583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:760052-760169:1:exon

position:760052:1
position: 760052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760169:1
position: 760169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:760402-760500:1:exon

position:760402:1
position: 760402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760500:1
position: 760500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:760588-760724:1:exon

position:760588:1
position: 760588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760724:1
position: 760724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:760886-761008:1:exon

position:760886:1
position: 760886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761008:1
position: 761008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:761118-761307:1:exon

position:761118:1
position: 761118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761307:1
position: 761307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:761393-761505:1:exon

position:761393:1
position: 761393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761505:1
position: 761505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:762815-763036:1:exon

position:762815:1
position: 762815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763036:1
position: 763036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:763113-763301:1:exon

position:763113:1
position: 763113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763301:1
position: 763301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:764889-765134:1:exon

position:764889:1
position: 764889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765134:1
position: 765134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:765396-765549:1:exon

position:765396:1
position: 765396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765549:1
position: 765549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:766080-766222:1:exon

position:766080:1
position: 766080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766222:1
position: 766222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:766356-766534:1:exon

position:766356:1
position: 766356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766534:1
position: 766534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:767160-767316:1:exon

position:767160:1
position: 767160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767316:1
position: 767316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:772312-772427:1:exon

position:772312:1
position: 772312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772427:1
position: 772427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:773101-773180:1:exon

position:773101:1
position: 773101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773180:1
position: 773180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:773960-774097:1:exon

position:773960:1
position: 773960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774097:1
position: 774097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:774685-774829:1:exon

position:774685:1
position: 774685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774829:1
position: 774829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:775572-775721:1:exon

position:775572:1
position: 775572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775721:1
position: 775721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:775799-775913:1:exon

position:775799:1
position: 775799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775913:1
position: 775913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:776301-776500:1:exon

position:776301:1
position: 776301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776500:1
position: 776500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:776937-777095:1:exon

position:776937:1
position: 776937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777095:1
position: 777095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:778832-778931:1:exon

position:778832:1
position: 778832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778931:1
position: 778931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:779184-779440:1:exon

position:779184:1
position: 779184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LAMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LAMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: laminin subunit gamma-1
translation: MRAPALWPALAVLAAAAGCARAAMDECADERGRPQRCMPEFVNAAFNATVVATNTCGSPPEEYCVQTGVTGVTKSCHLCDAAQPHLRHGAAFLTDYNNQADTTWWQSQTMLAGVQYPSAINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRAREDGPWVPYQYYSGSCENTYGRASRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFSDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNELGQLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSEECYFDPELYRSTGHGGHCVRCRDHTAGAHCERCREDFFRLGSSEACSPCHCSPVGSLSTQCDSYGRCSCKPGVTGDKCDRCQPGFHSLTEAGCRPCSCNPAGSADECSVETGRCVCKEHVEGFSCERCKPGFFNLDPSQPGGCTPCFCYGHSSVCTSAPGYSIHTVSSTFHADEDGWRVEQRDGSEASLEWSSERQDVAVISDSYLPRYFVAPAKFLGSQLLSYGQNLSFSFRVDRRDTRLSAEDVVLEGAGVRVAVPLIAQGNAYPSETAVKYVFRLHEAVDYPWRPALSAFEFQKLLNNLTAIKIRGTYSERSAGYLDDVTLATARLGPGVPVNWVESCTCPVGYGGQFCETCLPGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCDCRDNTAGPQCERCGDGYYGDSTTGTSADCQPCPCPGGSSCAMVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRPCQCSDNVDPNAVGNCNRSTGECLKCIYNTAGFYCDRCRDGFFGNPLAPSPADKCRACNCNSYGTVRQHGGCDPVTGQCECLSHVAGRDCGTCEPGFYNLQSGRGCQRCDCHALGSTDGQCDIRTGQCECQPGVTGQRCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCREDGGCECRPGFVGSRCDQCEENYFYNRSWPGCQECPACYRLVKDKVAEHRAKLQELESLVASLGTGDEAVTDQAFEDRLKEAEREVTDLLREAQDVKGSPGYQQPEQPGAEGRWHLLTCRLCTQREMKECEFLRQESITQPEATGDPNNMTLLAEEARRLAERHKQEADDIVRVATTANDTSAEAFALLLRTLAGENQTALEIQELNRKYEQARNLSRDLEAQAARVHEEAKRAGDKAVEIYASVAQLSPVDSEALENEARRIQKEAEDLDRLLDQKLQDYEDLRDDMRAKELEVQTLLEKGRTEQQTADQLLARADAAKALAEEAAKRGRNTLQEANDILNNLNDFDRRVNDNKTAAEEALRRVPAINRTIAEANEKTQGAQLALGNAAADATEAKHRAHEAERIASAVQKNATSTKAEAERTFAEVTDLDQEVSDMLKQLQDAEQELKQKQEDAEQDMMMAGMASQAAQEAEINARKVKNSATSLLGIINDLLQQLGQLDTVDLNKLNELEGSLSRAKGELEASGLLRKVSDLEDEARKQEAALLGYDRDIKEVLQDIQNLEDIRRSLPSGCFNTPSIEKP
SIO_010081: LAMC1
subclass of: SO_0000673
so part of: LAMC1
location: join(729558..729936,756759..757063,757720..757850,758488..758654,759395..759583,760052..760169,760402..760500,760588..760724,760886..761008,761118..761307,761393..761505,762815..763036,763113..763301,764889..765134,765396..765549,766080..766222,766356..766534,767160..767316,772312..772427,773101..773180,773960..774097,774685..774829,775572..775721,775799..775913,776301..776500,776937..777095,778832..778931,779184..779440)
location: region:729558-779440:1
so has part: feature:729558-729936:1:exon
so has part: feature:756759-757063:1:exon
so has part: feature:757720-757850:1:exon
so has part: feature:758488-758654:1:exon
so has part: feature:759395-759583:1:exon
so has part: feature:760052-760169:1:exon
so has part: feature:760402-760500:1:exon
so has part: feature:760588-760724:1:exon
so has part: feature:760886-761008:1:exon
so has part: feature:761118-761307:1:exon
so has part: feature:761393-761505:1:exon
so has part: feature:762815-763036:1:exon
so has part: feature:763113-763301:1:exon
so has part: feature:764889-765134:1:exon
so has part: feature:765396-765549:1:exon
so has part: feature:766080-766222:1:exon
so has part: feature:766356-766534:1:exon
so has part: feature:767160-767316:1:exon
so has part: feature:772312-772427:1:exon
so has part: feature:773101-773180:1:exon
so has part: feature:773960-774097:1:exon
so has part: feature:774685-774829:1:exon
so has part: feature:775572-775721:1:exon
so has part: feature:775799-775913:1:exon
so has part: feature:776301-776500:1:exon
so has part: feature:776937-777095:1:exon
so has part: feature:778832-778931:1:exon
so has part: feature:779184-779440:1:exon

XP_004579037.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:729558-729936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:756759-757063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:757720-757850:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:758488-758654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:759395-759583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:760052-760169:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:760402-760500:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:760588-760724:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:760886-761008:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:761118-761307:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:761393-761505:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:762815-763036:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:763113-763301:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:764889-765134:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:765396-765549:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:766080-766222:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:766356-766534:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:767160-767316:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:772312-772427:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:773101-773180:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:773960-774097:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:774685-774829:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:775572-775721:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:775799-775913:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:776301-776500:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:776937-777095:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:778832-778931:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:779184-779440:1:exon

LAMC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LAMC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 790164..819085
location: region:790164-819085:1
so has part: feature:790164-819085:1:exon
subclass of: SO_0000010

101523170
type: Gene
SIO_000068: ncbigene

position:790164:1
position: 790164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819085:1
position: 819085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790164-819085:1:exon

LAMC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LAMC2
product: laminin subunit gamma 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_004578979.1
SIO_010081: LAMC2
subclass of: SO_0000673
so part of: LAMC2
location: join(790164..790281,790382..790672,794545..794672,794837..794891,803142..803330,803597..803732,804739..804837,806324..806460,806555..806677,807380..807569,807717..807829,808063..808278,808625..808807,809003..809248,809647..809804,810146..810296,810460..810665,811225..811307,811384..811405,815534..815648,816172..816371,817500..817658,817784..817883,818832..819085)
location: region:790164-819085:1
so has part: feature:790164-790281:1:exon
so has part: feature:790382-790672:1:exon
so has part: feature:794545-794672:1:exon
so has part: feature:794837-794891:1:exon
so has part: feature:803142-803330:1:exon
so has part: feature:803597-803732:1:exon
so has part: feature:804739-804837:1:exon
so has part: feature:806324-806460:1:exon
so has part: feature:806555-806677:1:exon
so has part: feature:807380-807569:1:exon
so has part: feature:807717-807829:1:exon
so has part: feature:808063-808278:1:exon
so has part: feature:808625-808807:1:exon
so has part: feature:809003-809248:1:exon
so has part: feature:809647-809804:1:exon
so has part: feature:810146-810296:1:exon
so has part: feature:810460-810665:1:exon
so has part: feature:811225-811307:1:exon
so has part: feature:811384-811405:1:exon
so has part: feature:815534-815648:1:exon
so has part: feature:816172-816371:1:exon
so has part: feature:817500-817658:1:exon
so has part: feature:817784-817883:1:exon
so has part: feature:818832-819085:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:790164-790281:1:exon

position:790281:1
position: 790281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:790382-790672:1:exon

position:790382:1
position: 790382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790672:1
position: 790672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:794545-794672:1:exon

position:794545:1
position: 794545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794672:1
position: 794672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:794837-794891:1:exon

position:794837:1
position: 794837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794891:1
position: 794891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:803142-803330:1:exon

position:803142:1
position: 803142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803330:1
position: 803330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:803597-803732:1:exon

position:803597:1
position: 803597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803732:1
position: 803732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:804739-804837:1:exon

position:804739:1
position: 804739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804837:1
position: 804837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:806324-806460:1:exon

position:806324:1
position: 806324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806460:1
position: 806460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:806555-806677:1:exon

position:806555:1
position: 806555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806677:1
position: 806677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:807380-807569:1:exon

position:807380:1
position: 807380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807569:1
position: 807569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:807717-807829:1:exon

position:807717:1
position: 807717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807829:1
position: 807829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:808063-808278:1:exon

position:808063:1
position: 808063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808278:1
position: 808278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:808625-808807:1:exon

position:808625:1
position: 808625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808807:1
position: 808807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:809003-809248:1:exon

position:809003:1
position: 809003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809248:1
position: 809248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:809647-809804:1:exon

position:809647:1
position: 809647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809804:1
position: 809804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:810146-810296:1:exon

position:810146:1
position: 810146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810296:1
position: 810296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:810460-810665:1:exon

position:810460:1
position: 810460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810665:1
position: 810665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:811225-811307:1:exon

position:811225:1
position: 811225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811307:1
position: 811307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:811384-811405:1:exon

position:811384:1
position: 811384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811405:1
position: 811405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:815534-815648:1:exon

position:815534:1
position: 815534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815648:1
position: 815648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:816172-816371:1:exon

position:816172:1
position: 816172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816371:1
position: 816371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:817500-817658:1:exon

position:817500:1
position: 817500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817658:1
position: 817658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:817784-817883:1:exon

position:817784:1
position: 817784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817883:1
position: 817883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:818832-819085:1:exon

position:818832:1
position: 818832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LAMC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LAMC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: laminin subunit gamma-2
translation: MGTLRRVWGAKGTAQALEGAVGGSQRPQAQVSRKLEAGPRRTADHPGGGGAPGEQGPPPPDCAARARPAQVSESLWKRGVFLPGLSQGEARLKPAEGARRERRRGSAEPTAMPALWLRCCLCLALLPAARAASGSADTTATGTVMSQLLVALVARVQVGNITAAPRCSDHGLRCSGEKRTIQFQFTVFERARSSQGGVCDCNGKSQQCTFDQELFRQTGSGFRCLRCEDNTDGAHCEKCKEGFHRPRGGDRCLPCDCSPTGSLSTQCDTSGHCSCKPGVTGDKCDRCQPGFHSLTSSGCSQDRGTRSPQCDCDPAGVVKPCEAGRCACKTAVTGERCDRCRPGHYYLEQDNPEGCTPCFCYGHSDNCRSATQYSVHRVASTFPRDADGWRAVQRNGAPARLQWSPHHHDVFSSARRAEPVYFVAPAKFLGNQQLSYGQRLSFDYRVDRGGRQPSAHDVVLEGAGLRVSAPLAPRGKMLPCGVSKTYTFRLSEHPSSHWSPQLSFLEYRRLLRNLTALRIRATYGEYSTGYLDNVTMISARPVPGAPAPWVEECACPAGYRGQFCQDCASGYKRDAAGLGPFGACVPCNCQGGACDPDTGDCYAGDENPGIQCADCPAGFYNDPQDPRGCKPCPCGEGLGCSVVPETEEVVCSSCPLGAMGARCESCADGYFGDPLGEHGPVRPCQPCQCNNNVDPRASGNCDHVTGRCLKCIHNTAGAHCDQCPAGYFGDPLAPHVEDKCRACNCNPAGSENGQCRRDGSCVCKPGFSGPSCEREVQATVPTSCPACYQQVHSQLDLLTEQLRNLEALVSKAQGSAVPDSELEGRLQQAERALQDILQEAQVSQDAGRALGFQLAKARSQENNFRARLAELRRTAESLLALGGPHLRQAQDTRRLLTQTRLHLEESDASLQNIQVPLSSEHGVGPGSFRSLAQEAMRLADSPRGPLLSMSEQLLSRASLARSRAQDAFSMGNATFYEVDSILQSLQEFDLQVGDRRAEAEEAMRRLSSISQKVAASSARTRQAEAAMGSAAADAQRARSAAAEVQQIARGIEQDIGSLNLEANGTADGALALEKGLATLKSDLRELEGELASKGLELDSDMDTVQAVAVEAQRVGAGAESAGAAVQGTLSMLDSVLQLLDQPGSVDEARLTSLEQELSRARTQIRSQLRPLMAELEDRVRRQRGHLGLLESDIASVLADVRNLESVRDTLPPGCYNTQALEQQ
SIO_010081: LAMC2
subclass of: SO_0000673
so part of: LAMC2
location: join(790164..790281,790382..790672,794545..794672,794837..794891,803142..803330,803597..803732,804739..804837,806324..806460,806555..806677,807380..807569,807717..807829,808063..808278,808625..808807,809003..809248,809647..809804,810146..810296,810460..810665,811225..811307,811384..811405,815534..815648,816172..816371,817500..817658,817784..817883,818832..819085)
location: region:790164-819085:1
so has part: feature:790164-790281:1:exon
so has part: feature:790382-790672:1:exon
so has part: feature:794545-794672:1:exon
so has part: feature:794837-794891:1:exon
so has part: feature:803142-803330:1:exon
so has part: feature:803597-803732:1:exon
so has part: feature:804739-804837:1:exon
so has part: feature:806324-806460:1:exon
so has part: feature:806555-806677:1:exon
so has part: feature:807380-807569:1:exon
so has part: feature:807717-807829:1:exon
so has part: feature:808063-808278:1:exon
so has part: feature:808625-808807:1:exon
so has part: feature:809003-809248:1:exon
so has part: feature:809647-809804:1:exon
so has part: feature:810146-810296:1:exon
so has part: feature:810460-810665:1:exon
so has part: feature:811225-811307:1:exon
so has part: feature:811384-811405:1:exon
so has part: feature:815534-815648:1:exon
so has part: feature:816172-816371:1:exon
so has part: feature:817500-817658:1:exon
so has part: feature:817784-817883:1:exon
so has part: feature:818832-819085:1:exon

XP_004579036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:790164-790281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:790382-790672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794545-794672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:794837-794891:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803142-803330:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:803597-803732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:804739-804837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:806324-806460:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806555-806677:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:807380-807569:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:807717-807829:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:808063-808278:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:808625-808807:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:809003-809248:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:809647-809804:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:810146-810296:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:810460-810665:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:811225-811307:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:811384-811405:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:815534-815648:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:816172-816371:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:817500-817658:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:817784-817883:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:818832-819085:1:exon

NMNAT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: NMNAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(823870..872948)
location: region:823870-872948:-1
so has part: feature:823870-872948:-1:exon
subclass of: SO_0000010

101519415
type: Gene
SIO_000068: ncbigene

position:823870:-1
position: 823870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872948:-1
position: 872948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823870-872948:-1:exon

NMNAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: NMNAT2
product: nicotinamide nucleotide adenylyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_004578832.1
SIO_010081: NMNAT2
subclass of: SO_0000673
so part of: NMNAT2
location: complement(join(823870..823972,824731..824798,824889..824990,832594..832670,834630..834674,835597..835677,836255..836381,837112..837190,838340..838407,838810..838898,872864..872948))
location: region:823870-872948:-1
so has part: feature:872864-872948:-1:exon
so has part: feature:838810-838898:-1:exon
so has part: feature:838340-838407:-1:exon
so has part: feature:837112-837190:-1:exon
so has part: feature:836255-836381:-1:exon
so has part: feature:835597-835677:-1:exon
so has part: feature:834630-834674:-1:exon
so has part: feature:832594-832670:-1:exon
so has part: feature:824889-824990:-1:exon
so has part: feature:824731-824798:-1:exon
so has part: feature:823870-823972:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:872864-872948:-1:exon

position:872864:-1
position: 872864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838810-838898:-1:exon

position:838810:-1
position: 838810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838898:-1
position: 838898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:838340-838407:-1:exon

position:838340:-1
position: 838340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838407:-1
position: 838407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:837112-837190:-1:exon

position:837112:-1
position: 837112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837190:-1
position: 837190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:836255-836381:-1:exon

position:836255:-1
position: 836255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836381:-1
position: 836381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:835597-835677:-1:exon

position:835597:-1
position: 835597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835677:-1
position: 835677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:834630-834674:-1:exon

position:834630:-1
position: 834630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834674:-1
position: 834674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:832594-832670:-1:exon

position:832594:-1
position: 832594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832670:-1
position: 832670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:824889-824990:-1:exon

position:824889:-1
position: 824889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824990:-1
position: 824990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:824731-824798:-1:exon

position:824731:-1
position: 824731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824798:-1
position: 824798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:823870-823972:-1:exon

position:823972:-1
position: 823972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NMNAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: NMNAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2
translation: MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLVMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLQHHRDLMKRVTGCILSNVNTPSMTPVIGQPQQETPPPSYQNGNVPTKPTAAKILGKVGESLGRICCVRPPVERFTFVDENANLGTVMRYEEIELRILLLCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRIMNHSSILRKYRNNILVVKDDVNHPMSAVSSTKSRLALQHGDGHVVDYLSQPVIDYILKSQLYINASG
SIO_010081: NMNAT2
subclass of: SO_0000673
so part of: NMNAT2
location: complement(join(823870..823972,824731..824798,824889..824990,832594..832670,834630..834674,835597..835677,836255..836381,837112..837190,838340..838407,838810..838898,872864..872948))
location: region:823870-872948:-1
so has part: feature:872864-872948:-1:exon
so has part: feature:838810-838898:-1:exon
so has part: feature:838340-838407:-1:exon
so has part: feature:837112-837190:-1:exon
so has part: feature:836255-836381:-1:exon
so has part: feature:835597-835677:-1:exon
so has part: feature:834630-834674:-1:exon
so has part: feature:832594-832670:-1:exon
so has part: feature:824889-824990:-1:exon
so has part: feature:824731-824798:-1:exon
so has part: feature:823870-823972:-1:exon

XP_004578889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:872864-872948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838810-838898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838340-838407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837112-837190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836255-836381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:835597-835677:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:834630-834674:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:832594-832670:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824889-824990:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824731-824798:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:823870-823972:-1:exon

SMG7
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SMG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 933826..989215
location: region:933826-989215:1
so has part: feature:933826-989215:1:exon
subclass of: SO_0000010

101522925
type: Gene
SIO_000068: ncbigene

position:933826:1
position: 933826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989215:1
position: 989215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933826-989215:1:exon

SMG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SMG7
product: SMG7 nonsense mediated mRNA decay factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_012929914.2
SIO_010081: SMG7
subclass of: SO_0000673
so part of: SMG7
location: join(933826..933941,941148..941179,942555..942672,944324..944456,953860..954031,955734..955759,959498..959660,959951..960107,974220..974290,975031..975091,977182..977301,978785..979073,980205..980343,980600..980961,981442..981789,985498..985647,987296..987355,987614..987773,988422..988592,988679..988824,989102..989215)
location: region:933826-989215:1
so has part: feature:933826-933941:1:exon
so has part: feature:941148-941179:1:exon
so has part: feature:942555-942672:1:exon
so has part: feature:944324-944456:1:exon
so has part: feature:953860-954031:1:exon
so has part: feature:955734-955759:1:exon
so has part: feature:959498-959660:1:exon
so has part: feature:959951-960107:1:exon
so has part: feature:974220-974290:1:exon
so has part: feature:975031-975091:1:exon
so has part: feature:977182-977301:1:exon
so has part: feature:978785-979073:1:exon
so has part: feature:980205-980343:1:exon
so has part: feature:980600-980961:1:exon
so has part: feature:981442-981789:1:exon
so has part: feature:985498-985647:1:exon
so has part: feature:987296-987355:1:exon
so has part: feature:987614-987773:1:exon
so has part: feature:988422-988592:1:exon
so has part: feature:988679-988824:1:exon
so has part: feature:989102-989215:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:933826-933941:1:exon

position:933941:1
position: 933941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:941148-941179:1:exon

position:941148:1
position: 941148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941179:1
position: 941179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:942555-942672:1:exon

position:942555:1
position: 942555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942672:1
position: 942672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:944324-944456:1:exon

position:944324:1
position: 944324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944456:1
position: 944456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:953860-954031:1:exon

position:953860:1
position: 953860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954031:1
position: 954031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:955734-955759:1:exon

position:955734:1
position: 955734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955759:1
position: 955759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:959498-959660:1:exon

position:959498:1
position: 959498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959660:1
position: 959660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:959951-960107:1:exon

position:959951:1
position: 959951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960107:1
position: 960107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:974220-974290:1:exon

position:974220:1
position: 974220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974290:1
position: 974290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:975031-975091:1:exon

position:975031:1
position: 975031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975091:1
position: 975091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:977182-977301:1:exon

position:977182:1
position: 977182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977301:1
position: 977301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:978785-979073:1:exon

position:978785:1
position: 978785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979073:1
position: 979073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:980205-980343:1:exon

position:980205:1
position: 980205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980343:1
position: 980343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:980600-980961:1:exon

position:980600:1
position: 980600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980961:1
position: 980961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:981442-981789:1:exon

position:981442:1
position: 981442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981789:1
position: 981789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:985498-985647:1:exon

position:985498:1
position: 985498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985647:1
position: 985647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:987296-987355:1:exon

position:987296:1
position: 987296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987355:1
position: 987355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:987614-987773:1:exon

position:987614:1
position: 987614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987773:1
position: 987773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:988422-988592:1:exon

position:988422:1
position: 988422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988592:1
position: 988592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:988679-988824:1:exon

position:988679:1
position: 988679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988824:1
position: 988824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:989102-989215:1:exon

position:989102:1
position: 989102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SMG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG7
translation: MKDWMFWQIVTVGANVSFQSQMRTENLKSEEHLRSSAIRQAEVLKADMTDSKLAPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIERRALSPQLRLLFQKAFNSQQLVHVTAVNLFQLHHLRDFSSETEPHAYSQDEQLCWTQLLALFMSFLGVLCKCPLQGEPQGDACSTFPLPAVKVSMDWLRLRPRVFQEAVVGERQYIWPWLISLLNSFHPHEEDLCSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRLRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSETKENLILQEASVSEAPASDGSTGLKSVLSTGRGLGSGGEPGEKPVVTFRENGKPREGSRDQGRSFPSKEVKSQTELRKTPVSEARKTPVAQSQASTSPLIPIHHPAAFPPLPSRPGFPPPTYVIPPPVAFSAGSGYTFPAGVSVPGPFLQPTAHAPAGKQSHIPYSQQRPSGPGPVSQGPQPPQPPSQQPLPSLPAQPTAQPTGQGPGPARAQQQSPTKAGPALGRSSPPHSGFQQYQQTDTSKQLWNPPQVQSPLGKILPAKPPYYLQPQDPGTLLEPALQPAALQQPLEKKRKPFLEPCHHSPSDASVPDFYWDSAYSMADSRAVVDRRGKRPPAGFRLEQEPMSRVPFEGPPSSPLLPPDLLQSLAALEDEEELLFANPPELYPALLGPLASLPGRSLFKSLLEKPSELMSLTGFSLNQERYPNSSVFNEVCGKNLTTSAKAELNPSLAPQETSLYSLFEGTPWSPSLPASSDQSTPASQSPHSSNPSSLPSSPPTHSHSSIPFSNFGPIGTPDNRERRTGDRWKTDKPAMSGFGIDYLSGPSSSESSWHQASTPGGPWPGPGPSVEDSSAVLMESLKSIWSSSLMRPGPSALEQLLMQQKQKQQRGQGAVNPPH
SIO_010081: SMG7
subclass of: SO_0000673
so part of: SMG7
location: join(933826..933941,941148..941179,942555..942672,944324..944456,953860..954031,955734..955759,959498..959660,959951..960107,974220..974290,975031..975091,977182..977301,978785..979073,980205..980343,980600..980961,981442..981789,985498..985647,987296..987355,987614..987773,988422..988592,988679..988824,989102..989215)
location: region:933826-989215:1
so has part: feature:933826-933941:1:exon
so has part: feature:941148-941179:1:exon
so has part: feature:942555-942672:1:exon
so has part: feature:944324-944456:1:exon
so has part: feature:953860-954031:1:exon
so has part: feature:955734-955759:1:exon
so has part: feature:959498-959660:1:exon
so has part: feature:959951-960107:1:exon
so has part: feature:974220-974290:1:exon
so has part: feature:975031-975091:1:exon
so has part: feature:977182-977301:1:exon
so has part: feature:978785-979073:1:exon
so has part: feature:980205-980343:1:exon
so has part: feature:980600-980961:1:exon
so has part: feature:981442-981789:1:exon
so has part: feature:985498-985647:1:exon
so has part: feature:987296-987355:1:exon
so has part: feature:987614-987773:1:exon
so has part: feature:988422-988592:1:exon
so has part: feature:988679-988824:1:exon
so has part: feature:989102-989215:1:exon

XP_012785368.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:933826-933941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:941148-941179:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:942555-942672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:944324-944456:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:953860-954031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955734-955759:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:959498-959660:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:959951-960107:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:974220-974290:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:975031-975091:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:977182-977301:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:978785-979073:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:980205-980343:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:980600-980961:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:981442-981789:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:985498-985647:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:987296-987355:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:987614-987773:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:988422-988592:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:988679-988824:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:989102-989215:1:exon

LOC118759193
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118759193
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 976015..976180
location: region:976015-976180:1
so has part: feature:976015-976180:1:exon

118759193
type: Gene
SIO_000068: ncbigene

position:976015:1
position: 976015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976180:1
position: 976180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976015-976180:1:exon

LOC118759193
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118759193
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118759193
subclass of: SO_0000673
so part of: LOC118759193
location: 976015..976180
location: region:976015-976180:1
so has part: feature:976015-976180:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:976015-976180:1:exon

NCF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: NCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(991298..1002205)
location: region:991298-1002205:-1
so has part: feature:991298-1002205:-1:exon
subclass of: SO_0000010

101522690
type: Gene
SIO_000068: ncbigene

position:991298:-1
position: 991298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002205:-1
position: 1002205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991298-1002205:-1:exon

NCF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: NCF2
product: neutrophil cytosolic factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_004578977.1
SIO_010081: NCF2
subclass of: SO_0000673
so part of: NCF2
location: complement(join(991298..991410,992863..993040,994304..994415,994507..994658,994856..994881,995478..995553,995996..996064,996142..996283,997015..997058,997659..997718,998578..998685,999187..999321,1000300..1000408,1001377..1001459,1002032..1002205))
location: region:991298-1002205:-1
so has part: feature:1002032-1002205:-1:exon
so has part: feature:1001377-1001459:-1:exon
so has part: feature:1000300-1000408:-1:exon
so has part: feature:999187-999321:-1:exon
so has part: feature:998578-998685:-1:exon
so has part: feature:997659-997718:-1:exon
so has part: feature:997015-997058:-1:exon
so has part: feature:996142-996283:-1:exon
so has part: feature:995996-996064:-1:exon
so has part: feature:995478-995553:-1:exon
so has part: feature:994856-994881:-1:exon
so has part: feature:994507-994658:-1:exon
so has part: feature:994304-994415:-1:exon
so has part: feature:992863-993040:-1:exon
so has part: feature:991298-991410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1002032-1002205:-1:exon

position:1002032:-1
position: 1002032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1001377-1001459:-1:exon

position:1001377:-1
position: 1001377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001459:-1
position: 1001459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1000300-1000408:-1:exon

position:1000300:-1
position: 1000300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000408:-1
position: 1000408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:999187-999321:-1:exon

position:999187:-1
position: 999187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999321:-1
position: 999321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:998578-998685:-1:exon

position:998578:-1
position: 998578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998685:-1
position: 998685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:997659-997718:-1:exon

position:997659:-1
position: 997659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997718:-1
position: 997718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:997015-997058:-1:exon

position:997015:-1
position: 997015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997058:-1
position: 997058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:996142-996283:-1:exon

position:996142:-1
position: 996142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996283:-1
position: 996283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:995996-996064:-1:exon

position:995996:-1
position: 995996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996064:-1
position: 996064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:995478-995553:-1:exon

position:995478:-1
position: 995478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995553:-1
position: 995553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:994856-994881:-1:exon

position:994856:-1
position: 994856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994881:-1
position: 994881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:994507-994658:-1:exon

position:994507:-1
position: 994507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994658:-1
position: 994658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:994304-994415:-1:exon

position:994304:-1
position: 994304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994415:-1
position: 994415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:992863-993040:-1:exon

position:992863:-1
position: 992863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993040:-1
position: 993040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:991298-991410:-1:exon

position:991410:-1
position: 991410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: NCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutrophil cytosol factor 2
translation: MSLAEAISLWNEGVLAADRKDWEGALAAFSSVQDPHSRICFNVGCVHSLLGDLQAAEKAFTNSIHRDKHLAVAYFQRGMLYYHLERYDSAIKDLKEALTQLRGNQLIDYKILGLQFKLFACEVLYNIALMYAKKEEWKQAEEQLALALNLKSEPRHSKVDKAMECVWKQKLYEPVLIPTGRLFRPNERQVAQLAKKDYLGKATVVASVVDQDSFSGFAPLQPQAAEPPPRPKTPEIFRALEGEAHRVLFGFVPETPEELRVMPGNIVFVLKKGSDNWATVMFNGQKGLVPCNYLEPVELRIHTQQQPQEDPTPELHIPAPPSASAPGRPPRSPGQRQKDEPQETRLSGPQPYMVKVHYKFTVAVETRAQLPYSQLLDLVARKLELLPEHTKLSYRPRADQQPVPLSEDSMPDAWRHATCSCLTLWCENTVGDQGIPERPKECEPMEAGEQAAGPQLGEGSRVVALFSYEASQPEDLALSEGDVVLVLAQVNDEWLEGECRGQVGIFPRAFVEELATPGQAVTPGAV
SIO_010081: NCF2
subclass of: SO_0000673
so part of: NCF2
location: complement(join(991298..991410,992863..993040,994304..994415,994507..994658,994856..994881,995478..995553,995996..996064,996142..996283,997015..997058,997659..997718,998578..998685,999187..999321,1000300..1000408,1001377..1001459,1002032..1002205))
location: region:991298-1002205:-1
so has part: feature:1002032-1002205:-1:exon
so has part: feature:1001377-1001459:-1:exon
so has part: feature:1000300-1000408:-1:exon
so has part: feature:999187-999321:-1:exon
so has part: feature:998578-998685:-1:exon
so has part: feature:997659-997718:-1:exon
so has part: feature:997015-997058:-1:exon
so has part: feature:996142-996283:-1:exon
so has part: feature:995996-996064:-1:exon
so has part: feature:995478-995553:-1:exon
so has part: feature:994856-994881:-1:exon
so has part: feature:994507-994658:-1:exon
so has part: feature:994304-994415:-1:exon
so has part: feature:992863-993040:-1:exon
so has part: feature:991298-991410:-1:exon

XP_004579034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1002032-1002205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1001377-1001459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1000300-1000408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:999187-999321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998578-998685:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:997659-997718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:997015-997058:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:996142-996283:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:995996-996064:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:995478-995553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:994856-994881:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:994507-994658:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:994304-994415:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:992863-993040:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:991298-991410:-1:exon

ARPC5
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ARPC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1010010..1016031)
location: region:1010010-1016031:-1
so has part: feature:1010010-1016031:-1:exon
subclass of: SO_0000010

101518992
type: Gene
SIO_000068: ncbigene

position:1010010:-1
position: 1010010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016031:-1
position: 1016031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010010-1016031:-1:exon

ARPC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ARPC5
product: actin related protein 2/3 complex subunit 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_004578830.1
SIO_010081: ARPC5
subclass of: SO_0000673
so part of: ARPC5
location: complement(join(1010010..1010072,1011427..1011603,1014580..1014662,1015890..1016031))
location: region:1010010-1016031:-1
so has part: feature:1015890-1016031:-1:exon
so has part: feature:1014580-1014662:-1:exon
so has part: feature:1011427-1011603:-1:exon
so has part: feature:1010010-1010072:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1015890-1016031:-1:exon

position:1015890:-1
position: 1015890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1014580-1014662:-1:exon

position:1014580:-1
position: 1014580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014662:-1
position: 1014662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1011427-1011603:-1:exon

position:1011427:-1
position: 1011427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011603:-1
position: 1011603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1010010-1010072:-1:exon

position:1010072:-1
position: 1010072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARPC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ARPC5
product: actin related protein 2/3 complex subunit 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_004578831.1
SIO_010081: ARPC5
subclass of: SO_0000673
so part of: ARPC5
location: complement(join(1010010..1010072,1011427..1011603,1014580..1014652,1015889..1016031))
location: region:1010010-1016031:-1
so has part: feature:1015889-1016031:-1:exon
so has part: feature:1014580-1014652:-1:exon
so has part: feature:1011427-1011603:-1:exon
so has part: feature:1010010-1010072:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1015889-1016031:-1:exon

position:1015889:-1
position: 1015889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1014580-1014652:-1:exon

position:1014652:-1
position: 1014652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1011427-1011603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1010010-1010072:-1:exon

ARPC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ARPC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 2/3 complex subunit 5 isoform X1
translation: MAKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRHCRTGNMTAALQAALKNPPINTKSQAVKDRAGSIVLRVLISFKASDIEKAVQSLDRSGVDLLMKYIYRGFESPSDNSSALLLQWHERALAAGGVGSIVRVLTARKTV
SIO_010081: ARPC5
subclass of: SO_0000673
so part of: ARPC5
location: complement(join(1010010..1010072,1011427..1011603,1014580..1014662,1015890..1016031))
location: region:1010010-1016031:-1
so has part: feature:1015890-1016031:-1:exon
so has part: feature:1014580-1014662:-1:exon
so has part: feature:1011427-1011603:-1:exon
so has part: feature:1010010-1010072:-1:exon

XP_004578887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1015890-1016031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1014580-1014662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011427-1011603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1010010-1010072:-1:exon

ARPC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ARPC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 2/3 complex subunit 5 isoform X2
translation: MAKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLRVLISFKASDIEKAVQSLDRSGVDLLMKYIYRGFESPSDNSSALLLQWHERALAAGGVGSIVRVLTARKTV
SIO_010081: ARPC5
subclass of: SO_0000673
so part of: ARPC5
location: complement(join(1010010..1010072,1011427..1011603,1014580..1014652,1015889..1016031))
location: region:1010010-1016031:-1
so has part: feature:1015889-1016031:-1:exon
so has part: feature:1014580-1014652:-1:exon
so has part: feature:1011427-1011603:-1:exon
so has part: feature:1010010-1010072:-1:exon

XP_004578888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1015889-1016031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1014580-1014652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011427-1011603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1010010-1010072:-1:exon

COLGALT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: COLGALT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1197314..1268254)
location: region:1197314-1268254:-1
so has part: feature:1197314-1268254:-1:exon
subclass of: SO_0000010

101518754
type: Gene
SIO_000068: ncbigene

position:1197314:-1
position: 1197314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1268254:-1
position: 1268254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1197314-1268254:-1:exon

COLGALT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: COLGALT2
product: collagen beta(1-O)galactosyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_004578829.1
SIO_010081: COLGALT2
subclass of: SO_0000673
so part of: COLGALT2
location: complement(join(1197314..1197590,1197879..1198085,1198428..1198555,1199262..1199394,1201906..1202012,1204825..1204901,1207997..1208116,1210459..1210663,1212502..1212636,1214487..1214604,1217906..1218016,1268001..1268254))
location: region:1197314-1268254:-1
so has part: feature:1268001-1268254:-1:exon
so has part: feature:1217906-1218016:-1:exon
so has part: feature:1214487-1214604:-1:exon
so has part: feature:1212502-1212636:-1:exon
so has part: feature:1210459-1210663:-1:exon
so has part: feature:1207997-1208116:-1:exon
so has part: feature:1204825-1204901:-1:exon
so has part: feature:1201906-1202012:-1:exon
so has part: feature:1199262-1199394:-1:exon
so has part: feature:1198428-1198555:-1:exon
so has part: feature:1197879-1198085:-1:exon
so has part: feature:1197314-1197590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268001-1268254:-1:exon

position:1268001:-1
position: 1268001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1217906-1218016:-1:exon

position:1217906:-1
position: 1217906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218016:-1
position: 1218016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1214487-1214604:-1:exon

position:1214487:-1
position: 1214487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214604:-1
position: 1214604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1212502-1212636:-1:exon

position:1212502:-1
position: 1212502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212636:-1
position: 1212636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1210459-1210663:-1:exon

position:1210459:-1
position: 1210459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210663:-1
position: 1210663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1207997-1208116:-1:exon

position:1207997:-1
position: 1207997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208116:-1
position: 1208116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1204825-1204901:-1:exon

position:1204825:-1
position: 1204825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204901:-1
position: 1204901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1201906-1202012:-1:exon

position:1201906:-1
position: 1201906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202012:-1
position: 1202012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1199262-1199394:-1:exon

position:1199262:-1
position: 1199262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199394:-1
position: 1199394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1198428-1198555:-1:exon

position:1198428:-1
position: 1198428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198555:-1
position: 1198555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1197879-1198085:-1:exon

position:1197879:-1
position: 1197879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198085:-1
position: 1198085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1197314-1197590:-1:exon

position:1197590:-1
position: 1197590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COLGALT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: COLGALT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: procollagen galactosyltransferase 2
translation: MAARPAVLACLLLTSGLLRGGCGVRFTAEPDPQEDDEESRTFPESPLQRPTVLVAILARNAARALPTFLGCLERLDYPKSRMAVWVATDHNVDNTTEILREWLRNVRGFYHYVEWRPMDEPESYPDEIGPKHWPSSRFAHVMKLRQAALRTAREKWSDYILFIDADNFLTNPQTLSLMMAENRTIVAPMLESRGLYSNFWCGMTPQGFYRRTPDYVQIREWKRTGCFPVPMVHSTFLIDLRKEASGKLAFYPPHPDYTWTFDDIIVFAFSSRQAGVQMYLCNREHYGYLPIPLKPHQTLQEDIDNLVYVQIEAMIDRPPMEPSQFVSVVPRHPDKMGFDEIFMINLKRRQDRRGRMLRTLQEQDIAVKVVEAVDGKALNTTQLKALHIEMLPGYRDPYSSRPLTRGEIGCFLSHYSVWKEAIDRALERVLVIEDDVRFEYQFKKKLVTLMEDVERAQLDWELIYIGRKRMQVKVPERAVPSVDNLVEADYSYWTLGYAISLEGAQKLVRAEPFGKMLPVDEFLPIMYDKHPVAEYKAHYQVRDLKAFSAEPLLVHPTHYTGQPGYLSDTETSTIWDNETVATDWDRAHPWKSRQQGHSHDSAKNTEARLPPTSLDAAPSRDEL
SIO_010081: COLGALT2
subclass of: SO_0000673
so part of: COLGALT2
location: complement(join(1197314..1197590,1197879..1198085,1198428..1198555,1199262..1199394,1201906..1202012,1204825..1204901,1207997..1208116,1210459..1210663,1212502..1212636,1214487..1214604,1217906..1218016,1268001..1268254))
location: region:1197314-1268254:-1
so has part: feature:1268001-1268254:-1:exon
so has part: feature:1217906-1218016:-1:exon
so has part: feature:1214487-1214604:-1:exon
so has part: feature:1212502-1212636:-1:exon
so has part: feature:1210459-1210663:-1:exon
so has part: feature:1207997-1208116:-1:exon
so has part: feature:1204825-1204901:-1:exon
so has part: feature:1201906-1202012:-1:exon
so has part: feature:1199262-1199394:-1:exon
so has part: feature:1198428-1198555:-1:exon
so has part: feature:1197879-1198085:-1:exon
so has part: feature:1197314-1197590:-1:exon

XP_004578886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1268001-1268254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1217906-1218016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1214487-1214604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1212502-1212636:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1210459-1210663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207997-1208116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1204825-1204901:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1201906-1202012:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1199262-1199394:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1198428-1198555:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1197879-1198085:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1197314-1197590:-1:exon

TSEN15
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TSEN15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1278806..1288026
location: region:1278806-1288026:1
so has part: feature:1278806-1288026:1:exon
subclass of: SO_0000010

101522183
type: Gene
SIO_000068: ncbigene

position:1278806:1
position: 1278806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288026:1
position: 1288026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278806-1288026:1:exon

TSEN15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TSEN15
product: tRNA splicing endonuclease subunit 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_012929911.1
SIO_010081: TSEN15
subclass of: SO_0000673
so part of: TSEN15
location: join(1278806..1278832,1281697..1281778,1281993..1282128,1287858..1288026)
location: region:1278806-1288026:1
so has part: feature:1278806-1278832:1:exon
so has part: feature:1281697-1281778:1:exon
so has part: feature:1281993-1282128:1:exon
so has part: feature:1287858-1288026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1278806-1278832:1:exon

position:1278832:1
position: 1278832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1281697-1281778:1:exon

position:1281697:1
position: 1281697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281778:1
position: 1281778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1281993-1282128:1:exon

position:1281993:1
position: 1281993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282128:1
position: 1282128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1287858-1288026:1:exon

position:1287858:1
position: 1287858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSEN15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TSEN15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen15
translation: MEEEKVVNIYVEMMELDIGDAAQVYVAFLVYLDLMERQSWYEVSCVGLRELQLLCLVGTETQGEGLQTIVPTRVSASLSHNRIREILKASRKLRGDPDLPMSFTLAIVESDSTIVYYRLTDGFTLPDPQVSREKRKV
SIO_010081: TSEN15
subclass of: SO_0000673
so part of: TSEN15
location: join(1278806..1278832,1281697..1281778,1281993..1282128,1287858..1288026)
location: region:1278806-1288026:1
so has part: feature:1278806-1278832:1:exon
so has part: feature:1281697-1281778:1:exon
so has part: feature:1281993-1282128:1:exon
so has part: feature:1287858-1288026:1:exon

XP_012785365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1278806-1278832:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281697-1281778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1281993-1282128:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1287858-1288026:1:exon

C16H1orf21
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: C16H1orf21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1402703..1431843
location: region:1402703-1431843:1
so has part: feature:1402703-1431843:1:exon
subclass of: SO_0000010

101518517
type: Gene
SIO_000068: ncbigene

position:1402703:1
position: 1402703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431843:1
position: 1431843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1402703-1431843:1:exon

C16H1orf21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: C16H1orf21
product: chromosome 16 C1orf21 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_004578828.1
SIO_010081: C16H1orf21
subclass of: SO_0000673
so part of: C16H1orf21
location: join(1402703..1402796,1407928..1408022,1427375..1427451,1428268..1428328,1431805..1431843)
location: region:1402703-1431843:1
so has part: feature:1402703-1402796:1:exon
so has part: feature:1407928-1408022:1:exon
so has part: feature:1427375-1427451:1:exon
so has part: feature:1428268-1428328:1:exon
so has part: feature:1431805-1431843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1402703-1402796:1:exon

position:1402796:1
position: 1402796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1407928-1408022:1:exon

position:1407928:1
position: 1407928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408022:1
position: 1408022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1427375-1427451:1:exon

position:1427375:1
position: 1427375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427451:1
position: 1427451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1428268-1428328:1:exon

position:1428268:1
position: 1428268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428328:1
position: 1428328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1431805-1431843:1:exon

position:1431805:1
position: 1431805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C16H1orf21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: C16H1orf21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf21 homolog
translation: MGCASAKHVAAVQNEEEAQKGKSFQNGDVFGDEYRIKPVEEVRYMKPGAEDEQKIMARNQENLEKSASSSARLKTSKEVPGLVHQPRANMHISESQQEFFRMLDEKIEQGRDYCSEEEDVS
SIO_010081: C16H1orf21
subclass of: SO_0000673
so part of: C16H1orf21
location: join(1402703..1402796,1407928..1408022,1427375..1427451,1428268..1428328,1431805..1431843)
location: region:1402703-1431843:1
so has part: feature:1402703-1402796:1:exon
so has part: feature:1407928-1408022:1:exon
so has part: feature:1427375-1427451:1:exon
so has part: feature:1428268-1428328:1:exon
so has part: feature:1431805-1431843:1:exon

XP_004578885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1402703-1402796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1407928-1408022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427375-1427451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1428268-1428328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1431805-1431843:1:exon

EDEM3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: EDEM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1442945..1501736)
location: region:1442945-1501736:-1
so has part: feature:1442945-1501736:-1:exon
subclass of: SO_0000010

101518271
type: Gene
SIO_000068: ncbigene

position:1442945:-1
position: 1442945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1501736:-1
position: 1501736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1442945-1501736:-1:exon

EDEM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: EDEM3
product: ER degradation enhancing alpha-mannosidase like protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578827.1
SIO_010081: EDEM3
subclass of: SO_0000673
so part of: EDEM3
location: complement(join(1442945..1443375,1449805..1449990,1452082..1452247,1454032..1454223,1456078..1456231,1457252..1457406,1457997..1458162,1462404..1462528,1462930..1463013,1464118..1464201,1464309..1464434,1465452..1465549,1469605..1469710,1471213..1471347,1477885..1478038,1478790..1478902,1483868..1483907,1484253..1484353,1498395..1498440,1501712..1501736))
location: region:1442945-1501736:-1
so has part: feature:1501712-1501736:-1:exon
so has part: feature:1498395-1498440:-1:exon
so has part: feature:1484253-1484353:-1:exon
so has part: feature:1483868-1483907:-1:exon
so has part: feature:1478790-1478902:-1:exon
so has part: feature:1477885-1478038:-1:exon
so has part: feature:1471213-1471347:-1:exon
so has part: feature:1469605-1469710:-1:exon
so has part: feature:1465452-1465549:-1:exon
so has part: feature:1464309-1464434:-1:exon
so has part: feature:1464118-1464201:-1:exon
so has part: feature:1462930-1463013:-1:exon
so has part: feature:1462404-1462528:-1:exon
so has part: feature:1457997-1458162:-1:exon
so has part: feature:1457252-1457406:-1:exon
so has part: feature:1456078-1456231:-1:exon
so has part: feature:1454032-1454223:-1:exon
so has part: feature:1452082-1452247:-1:exon
so has part: feature:1449805-1449990:-1:exon
so has part: feature:1442945-1443375:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1501712-1501736:-1:exon

position:1501712:-1
position: 1501712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1498395-1498440:-1:exon

position:1498395:-1
position: 1498395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498440:-1
position: 1498440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1484253-1484353:-1:exon

position:1484253:-1
position: 1484253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1484353:-1
position: 1484353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1483868-1483907:-1:exon

position:1483868:-1
position: 1483868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483907:-1
position: 1483907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1478790-1478902:-1:exon

position:1478790:-1
position: 1478790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1478902:-1
position: 1478902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1477885-1478038:-1:exon

position:1477885:-1
position: 1477885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1478038:-1
position: 1478038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1471213-1471347:-1:exon

position:1471213:-1
position: 1471213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471347:-1
position: 1471347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1469605-1469710:-1:exon

position:1469605:-1
position: 1469605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1469710:-1
position: 1469710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1465452-1465549:-1:exon

position:1465452:-1
position: 1465452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1465549:-1
position: 1465549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1464309-1464434:-1:exon

position:1464309:-1
position: 1464309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1464434:-1
position: 1464434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1464118-1464201:-1:exon

position:1464118:-1
position: 1464118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1464201:-1
position: 1464201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1462930-1463013:-1:exon

position:1462930:-1
position: 1462930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1463013:-1
position: 1463013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1462404-1462528:-1:exon

position:1462404:-1
position: 1462404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1462528:-1
position: 1462528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1457997-1458162:-1:exon

position:1457997:-1
position: 1457997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1458162:-1
position: 1458162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1457252-1457406:-1:exon

position:1457252:-1
position: 1457252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1457406:-1
position: 1457406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1456078-1456231:-1:exon

position:1456078:-1
position: 1456078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1456231:-1
position: 1456231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1454032-1454223:-1:exon

position:1454032:-1
position: 1454032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454223:-1
position: 1454223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1452082-1452247:-1:exon

position:1452082:-1
position: 1452082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452247:-1
position: 1452247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1449805-1449990:-1:exon

position:1449805:-1
position: 1449805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449990:-1
position: 1449990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1442945-1443375:-1:exon

position:1443375:-1
position: 1443375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EDEM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: EDEM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER degradation-enhancing alpha-mannosidase-like protein 3
translation: MFDHAYGNYMEHAYPADELMPLTCRGRVRGQEPSRGDVDDALGKFSLTLIDSLDTLVVLNKTKEFEDAVKKVLRDVNLDNDVVVSVFETNIRVLGGLLGGHSLAIMLKEKGQHMQWYSGELLHMAKQLGYKLLPAFNTTSGLPYPRINLKFGIRKPEARTGAETDTCTACAGTLILEFAALSRFTGATIFEEYARKALDFLWEKRQRSSNLVGVTINIHTGDWVRKDSGVGAGIDSYYEYLLKAYVLLGDDSFLERFNTHYDAIMRYISQPPLLLDVHIHKPLLNARSWMDALLAFFPGLQVLKGDIRPAIETHEMLYQVIKKHNFLPEAFTTDFRVHWAQHPLRPEFAESTYFLYKATGDPYYLEVGKTLIENLNKYARVPCGFAAMKDVRTGSHEDRMDSFFLAEMFKYLYLLFAEKEDIIFDIEDYIFTTEAHLLPLWLSTSKHSVPRRNTTSEYTELDDSNFDWTCPNAQLLFPNDPLYAQSIREPLKNVVDKSCPRGIIRVEESFRSGAKPPLRARDFMATNPEHLEILKKMGVSLIHLKDGRVQLVQHAIQAASSVDAEDGLRFMQEMMELSSRQQKEQQLPPRAVQIVSHPFFGRVVLTAGPAQFGLDLSKHKGTRGFVASSKPYNGCSELTNPEAVVGKIALMQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIQIPMLFLFSKEGSIILEAMREYEQVEVLLSDRARDRDGEMDSEELPSPDQEAPSQSTEQVPTVPQTLDEARLDPAGEGPGASPPEPLSPTDPEPDLEPDPGTGDVPSGQTAHTPEAQEPDSLDGECTEGDPSQPREQSEPEDEATAQASWGDKAQPIDSMLADWSEDIEAFEMMGKDEL
SIO_010081: EDEM3
subclass of: SO_0000673
so part of: EDEM3
location: complement(join(1442945..1443375,1449805..1449990,1452082..1452247,1454032..1454223,1456078..1456231,1457252..1457406,1457997..1458162,1462404..1462528,1462930..1463013,1464118..1464201,1464309..1464434,1465452..1465549,1469605..1469710,1471213..1471347,1477885..1478038,1478790..1478902,1483868..1483907,1484253..1484353,1498395..1498424))
location: region:1442945-1498424:-1
so has part: feature:1498395-1498424:-1:exon
so has part: feature:1484253-1484353:-1:exon
so has part: feature:1483868-1483907:-1:exon
so has part: feature:1478790-1478902:-1:exon
so has part: feature:1477885-1478038:-1:exon
so has part: feature:1471213-1471347:-1:exon
so has part: feature:1469605-1469710:-1:exon
so has part: feature:1465452-1465549:-1:exon
so has part: feature:1464309-1464434:-1:exon
so has part: feature:1464118-1464201:-1:exon
so has part: feature:1462930-1463013:-1:exon
so has part: feature:1462404-1462528:-1:exon
so has part: feature:1457997-1458162:-1:exon
so has part: feature:1457252-1457406:-1:exon
so has part: feature:1456078-1456231:-1:exon
so has part: feature:1454032-1454223:-1:exon
so has part: feature:1452082-1452247:-1:exon
so has part: feature:1449805-1449990:-1:exon
so has part: feature:1442945-1443375:-1:exon

XP_004578884.1
type: Protein
SIO_000068: ncbiprotein

position:1498424:-1
position: 1498424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1498395-1498424:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1484253-1484353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1483868-1483907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1478790-1478902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1477885-1478038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1471213-1471347:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1469605-1469710:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1465452-1465549:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1464309-1464434:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1464118-1464201:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1462930-1463013:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1462404-1462528:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1457997-1458162:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1457252-1457406:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1456078-1456231:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1454032-1454223:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1452082-1452247:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1449805-1449990:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1442945-1443375:-1:exon

NIBAN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: NIBAN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1525789..1575029)
location: region:1525789-1575029:-1
so has part: feature:1525789-1575029:-1:exon
subclass of: SO_0000010

101521926
type: Gene
SIO_000068: ncbigene

position:1525789:-1
position: 1525789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575029:-1
position: 1575029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1525789-1575029:-1:exon

NIBAN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: NIBAN1
product: niban apoptosis regulator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_036495277.1
SIO_010081: NIBAN1
subclass of: SO_0000673
so part of: NIBAN1
location: complement(join(1525789..1526600,1527792..1527903,1528296..1528403,1530268..1530378,1532741..1532902,1533685..1533872,1534954..1535116,1535237..1535341,1536861..1536976,1568723..1568887,1571353..1571467,1572309..1572440,1574224..1574354,1574993..1575029))
location: region:1525789-1575029:-1
so has part: feature:1574993-1575029:-1:exon
so has part: feature:1574224-1574354:-1:exon
so has part: feature:1572309-1572440:-1:exon
so has part: feature:1571353-1571467:-1:exon
so has part: feature:1568723-1568887:-1:exon
so has part: feature:1536861-1536976:-1:exon
so has part: feature:1535237-1535341:-1:exon
so has part: feature:1534954-1535116:-1:exon
so has part: feature:1533685-1533872:-1:exon
so has part: feature:1532741-1532902:-1:exon
so has part: feature:1530268-1530378:-1:exon
so has part: feature:1528296-1528403:-1:exon
so has part: feature:1527792-1527903:-1:exon
so has part: feature:1525789-1526600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1574993-1575029:-1:exon

position:1574993:-1
position: 1574993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1574224-1574354:-1:exon

position:1574224:-1
position: 1574224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574354:-1
position: 1574354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1572309-1572440:-1:exon

position:1572309:-1
position: 1572309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572440:-1
position: 1572440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1571353-1571467:-1:exon

position:1571353:-1
position: 1571353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571467:-1
position: 1571467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1568723-1568887:-1:exon

position:1568723:-1
position: 1568723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568887:-1
position: 1568887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1536861-1536976:-1:exon

position:1536861:-1
position: 1536861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1536976:-1
position: 1536976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1535237-1535341:-1:exon

position:1535237:-1
position: 1535237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535341:-1
position: 1535341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1534954-1535116:-1:exon

position:1534954:-1
position: 1534954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535116:-1
position: 1535116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1533685-1533872:-1:exon

position:1533685:-1
position: 1533685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1533872:-1
position: 1533872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1532741-1532902:-1:exon

position:1532741:-1
position: 1532741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1532902:-1
position: 1532902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1530268-1530378:-1:exon

position:1530268:-1
position: 1530268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1530378:-1
position: 1530378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1528296-1528403:-1:exon

position:1528296:-1
position: 1528296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1528403:-1
position: 1528403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1527792-1527903:-1:exon

position:1527792:-1
position: 1527792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527903:-1
position: 1527903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1525789-1526600:-1:exon

position:1526600:-1
position: 1526600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NIBAN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: NIBAN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Niban 1
translation: MMVLVMSQEETEGKTEAVLKDFGPYYSGQYAVAFCSHVHCQVEQHRDAVTQLLKTKPPLEPGTVLYEAEVMQFAEDLKKWKERYIVIKDDFAMESYESREAYQKGAVPKSRVLPVDGKVFTSEAEYSLLADRHFPDPTGSSEDSSQLLAAPPREFPVFLWQPFLRHGCFCFAEATAQRRFSATLRDCIRRLNHDYMKQTTFEARAFLAAVQFFRQEKGHYGAQQNITGDEVQVLSSLVMEELLPALQADLLPSMKGKRNDRKRAWFGLLEEAFHLVQRQVAEGLRALREECRALTEGLDGKIRADMDQIVNSKNFLAGKLGVMLAQPAEEICAESVRPFLASVLDELLGPVSSGFRAVRSLFEKEVDELCQGFQTSTNSSQLQEHLDHLLHLPLDPVKMELCYSEASLLQEGLRDLNSRFRFFHVDLLVQRTQNHMQELMENAVFTFTQLLAPHLQGEPTRTPAAMEKVKLRVLKQYDHDSSCVRKKLLQEALVQIVLPTVQKALAPTCKPELHRYEQLIFADHSRMIQVDSVYEEVLQQLLLGEVLRVIGEAAVLKKHNLFEQGMALASESVSSLTDLKTPIGSDQASPARRASATPQEVPGSEGPGQGAGSQPKEEVQPGPPAPGGGGQEVPAATAPVAAEAGAESGSTGHPQDLEPSPRPPESTSGSLQELRKLLVESVQVVDRDPEEEASCSPGNQEEETATKHTAHHQATASDLLLGPQCWETPKAPPEPQPGPGELTHGPPEQELIARASPQNAQEGTEALGAESQGTPAVGSMGPEEAKAASAHACQWVVEVDPTPTDGAGEREGGQETSQ
SIO_010081: NIBAN1
subclass of: SO_0000673
so part of: NIBAN1
location: complement(join(1525789..1526600,1527792..1527903,1528296..1528403,1530268..1530378,1532741..1532902,1533685..1533872,1534954..1535116,1535237..1535341,1536861..1536976,1568723..1568887,1571353..1571467,1572309..1572440,1574224..1574354,1574993..1575029))
location: region:1525789-1575029:-1
so has part: feature:1574993-1575029:-1:exon
so has part: feature:1574224-1574354:-1:exon
so has part: feature:1572309-1572440:-1:exon
so has part: feature:1571353-1571467:-1:exon
so has part: feature:1568723-1568887:-1:exon
so has part: feature:1536861-1536976:-1:exon
so has part: feature:1535237-1535341:-1:exon
so has part: feature:1534954-1535116:-1:exon
so has part: feature:1533685-1533872:-1:exon
so has part: feature:1532741-1532902:-1:exon
so has part: feature:1530268-1530378:-1:exon
so has part: feature:1528296-1528403:-1:exon
so has part: feature:1527792-1527903:-1:exon
so has part: feature:1525789-1526600:-1:exon

XP_036351170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1574993-1575029:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1574224-1574354:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1572309-1572440:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1571353-1571467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1568723-1568887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1536861-1536976:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1535237-1535341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1534954-1535116:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1533685-1533872:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1532741-1532902:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1530268-1530378:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1528296-1528403:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1527792-1527903:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1525789-1526600:-1:exon

RNF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1666413..1683432
location: region:1666413-1683432:1
so has part: feature:1666413-1683432:1:exon
subclass of: SO_0000010

101518035
type: Gene
SIO_000068: ncbigene

position:1666413:1
position: 1666413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683432:1
position: 1683432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1666413-1683432:1:exon

RNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RNF2
product: ring finger protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036495256.1
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: join(1666413..1666499,1671534..1671693,1673009..1673076,1673901..1674049,1680780..1681052,1682317..1682488,1682704..1683432)
location: region:1666413-1683432:1
so has part: feature:1666413-1666499:1:exon
so has part: feature:1671534-1671693:1:exon
so has part: feature:1673009-1673076:1:exon
so has part: feature:1673901-1674049:1:exon
so has part: feature:1680780-1681052:1:exon
so has part: feature:1682317-1682488:1:exon
so has part: feature:1682704-1683432:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1666413-1666499:1:exon

position:1666499:1
position: 1666499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1671534-1671693:1:exon

position:1671534:1
position: 1671534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1671693:1
position: 1671693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1673009-1673076:1:exon

position:1673009:1
position: 1673009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1673076:1
position: 1673076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1673901-1674049:1:exon

position:1673901:1
position: 1673901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1674049:1
position: 1674049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1680780-1681052:1:exon

position:1680780:1
position: 1680780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681052:1
position: 1681052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1682317-1682488:1:exon

position:1682317:1
position: 1682317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682488:1
position: 1682488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1682704-1683432:1:exon

position:1682704:1
position: 1682704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING2
translation: MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNXDALISKIYPSRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLELDNNNASVAIDPVMDGASEIELVFRPHPTLMEKDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: join(1666413..1666499,1671534..1671693,1673009..1673076,1673901..1674049,1680780..1681052,1682317..1682488,1682704..1682805)
location: region:1666413-1682805:1
so has part: feature:1666413-1666499:1:exon
so has part: feature:1671534-1671693:1:exon
so has part: feature:1673009-1673076:1:exon
so has part: feature:1673901-1674049:1:exon
so has part: feature:1680780-1681052:1:exon
so has part: feature:1682317-1682488:1:exon
so has part: feature:1682704-1682805:1:exon

XP_036351149.1
type: Protein
SIO_000068: ncbiprotein

position:1682805:1
position: 1682805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1666413-1666499:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1671534-1671693:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1673009-1673076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1673901-1674049:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1680780-1681052:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1682317-1682488:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1682704-1682805:1:exon

TRMT1L
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TRMT1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1689988..1712275)
location: region:1689988-1712275:-1
so has part: feature:1689988-1712275:-1:exon
subclass of: SO_0000010

101521680
type: Gene
SIO_000068: ncbigene

position:1689988:-1
position: 1689988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1712275:-1
position: 1712275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1689988-1712275:-1:exon

TRMT1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TRMT1L
product: tRNA methyltransferase 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_012929908.1
SIO_010081: TRMT1L
subclass of: SO_0000673
so part of: TRMT1L
location: complement(join(1689988..1690240,1690334..1690460,1696866..1696891,1697260..1697338,1699904..1700094,1701781..1701993,1703001..1703247,1705196..1705275,1705710..1705833,1708045..1708174,1709921..1709985,1710901..1711014,1712173..1712275))
location: region:1689988-1712275:-1
so has part: feature:1712173-1712275:-1:exon
so has part: feature:1710901-1711014:-1:exon
so has part: feature:1709921-1709985:-1:exon
so has part: feature:1708045-1708174:-1:exon
so has part: feature:1705710-1705833:-1:exon
so has part: feature:1705196-1705275:-1:exon
so has part: feature:1703001-1703247:-1:exon
so has part: feature:1701781-1701993:-1:exon
so has part: feature:1699904-1700094:-1:exon
so has part: feature:1697260-1697338:-1:exon
so has part: feature:1696866-1696891:-1:exon
so has part: feature:1690334-1690460:-1:exon
so has part: feature:1689988-1690240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1712173-1712275:-1:exon

position:1712173:-1
position: 1712173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1710901-1711014:-1:exon

position:1710901:-1
position: 1710901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1711014:-1
position: 1711014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1709921-1709985:-1:exon

position:1709921:-1
position: 1709921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1709985:-1
position: 1709985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1708045-1708174:-1:exon

position:1708045:-1
position: 1708045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1708174:-1
position: 1708174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1705710-1705833:-1:exon

position:1705710:-1
position: 1705710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1705833:-1
position: 1705833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1705196-1705275:-1:exon

position:1705196:-1
position: 1705196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1705275:-1
position: 1705275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1703001-1703247:-1:exon

position:1703001:-1
position: 1703001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1703247:-1
position: 1703247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1701781-1701993:-1:exon

position:1701781:-1
position: 1701781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1701993:-1
position: 1701993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1699904-1700094:-1:exon

position:1699904:-1
position: 1699904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1700094:-1
position: 1700094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1697260-1697338:-1:exon

position:1697260:-1
position: 1697260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1697338:-1
position: 1697338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1696866-1696891:-1:exon

position:1696866:-1
position: 1696866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696891:-1
position: 1696891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1690334-1690460:-1:exon

position:1690334:-1
position: 1690334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1690460:-1
position: 1690460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1689988-1690240:-1:exon

position:1690240:-1
position: 1690240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRMT1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TRMT1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TRMT1-like protein
translation: MCICHLACRPVKPNTTGEQIASKMGAHYHCIICSATIARRTDMLGHVRRHENKGETKSSYVAASAVKAPHETLKETDTDVLVCPNCTVPQKADSYFNPKMKLNRQLVFCTLAALAEERKPLDCLDAFGATGIMGLQWAKHLGSAVQVTINDLSENSVTLIQENCHLNNLKVKDSRETGGSDGTLGEGEETLGDIKVTKMDANVLMHLRSFDFIHLDPFGTSVNYLDSAFRNVRNLGVVSVTSTDTSSLYAKAQHVARRHYGCTVVRTEYYKELAARVVVAAVARAAARCNKGIQVLLAVALEHFVLVAVRVLRGPTSADASARKIQYLIHCQWCEERIFRRGGDMVEANPYKQLPCDCHRSMPGKTAMELGPLCDSHSVHLGRKRKSSEVIANLAKKQKSDVSTEHPPFYYNVHRHSIKGMNMPKLKKFLCYLSQAGFRVSRTHFDPMGVRTDAPLMQFKSILLKYSTPTYAGGQAEGHVQSAPEDTAANRAETSVSDQAEAGGCRRR
SIO_010081: TRMT1L
subclass of: SO_0000673
so part of: TRMT1L
location: complement(join(1689988..1690240,1690334..1690460,1696866..1696891,1697260..1697338,1699904..1700094,1701781..1701993,1703001..1703247,1705196..1705275,1705710..1705833,1708045..1708174,1709921..1709977))
location: region:1689988-1709977:-1
so has part: feature:1709921-1709977:-1:exon
so has part: feature:1708045-1708174:-1:exon
so has part: feature:1705710-1705833:-1:exon
so has part: feature:1705196-1705275:-1:exon
so has part: feature:1703001-1703247:-1:exon
so has part: feature:1701781-1701993:-1:exon
so has part: feature:1699904-1700094:-1:exon
so has part: feature:1697260-1697338:-1:exon
so has part: feature:1696866-1696891:-1:exon
so has part: feature:1690334-1690460:-1:exon
so has part: feature:1689988-1690240:-1:exon

XP_012785362.1
type: Protein
SIO_000068: ncbiprotein

position:1709977:-1
position: 1709977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1709921-1709977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1708045-1708174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1705710-1705833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1705196-1705275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1703001-1703247:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1701781-1701993:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1699904-1700094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1697260-1697338:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1696866-1696891:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1690334-1690460:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1689988-1690240:-1:exon

SWT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SWT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1719284..1799422
location: region:1719284-1799422:1
so has part: feature:1719284-1799422:1:exon
subclass of: SO_0000010

101521446
type: Gene
SIO_000068: ncbigene

position:1719284:1
position: 1719284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799422:1
position: 1799422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1719284-1799422:1:exon

SWT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SWT1
product: SWT1 RNA endoribonuclease homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930637.2
SIO_010081: SWT1
subclass of: SO_0000673
so part of: SWT1
location: join(1719284..1719438,1722933..1723019,1729392..1729450,1733738..1734413,1737100..1737159,1738830..1738959,1740921..1741022,1741879..1742067,1743815..1743908,1750926..1751071,1752541..1752704,1754743..1754881,1757819..1757967,1764195..1764382,1766983..1767114,1782712..1782778,1789600..1789664,1798714..1799422)
location: region:1719284-1799422:1
so has part: feature:1719284-1719438:1:exon
so has part: feature:1722933-1723019:1:exon
so has part: feature:1729392-1729450:1:exon
so has part: feature:1733738-1734413:1:exon
so has part: feature:1737100-1737159:1:exon
so has part: feature:1738830-1738959:1:exon
so has part: feature:1740921-1741022:1:exon
so has part: feature:1741879-1742067:1:exon
so has part: feature:1743815-1743908:1:exon
so has part: feature:1750926-1751071:1:exon
so has part: feature:1752541-1752704:1:exon
so has part: feature:1754743-1754881:1:exon
so has part: feature:1757819-1757967:1:exon
so has part: feature:1764195-1764382:1:exon
so has part: feature:1766983-1767114:1:exon
so has part: feature:1782712-1782778:1:exon
so has part: feature:1789600-1789664:1:exon
so has part: feature:1798714-1799422:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1719284-1719438:1:exon

position:1719438:1
position: 1719438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1722933-1723019:1:exon

position:1722933:1
position: 1722933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1723019:1
position: 1723019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1729392-1729450:1:exon

position:1729392:1
position: 1729392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1729450:1
position: 1729450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1733738-1734413:1:exon

position:1733738:1
position: 1733738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1734413:1
position: 1734413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1737100-1737159:1:exon

position:1737100:1
position: 1737100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1737159:1
position: 1737159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1738830-1738959:1:exon

position:1738830:1
position: 1738830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1738959:1
position: 1738959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1740921-1741022:1:exon

position:1740921:1
position: 1740921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1741022:1
position: 1741022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1741879-1742067:1:exon

position:1741879:1
position: 1741879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1742067:1
position: 1742067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1743815-1743908:1:exon

position:1743815:1
position: 1743815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1743908:1
position: 1743908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1750926-1751071:1:exon

position:1750926:1
position: 1750926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1751071:1
position: 1751071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1752541-1752704:1:exon

position:1752541:1
position: 1752541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1752704:1
position: 1752704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1754743-1754881:1:exon

position:1754743:1
position: 1754743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1754881:1
position: 1754881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1757819-1757967:1:exon

position:1757819:1
position: 1757819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1757967:1
position: 1757967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1764195-1764382:1:exon

position:1764195:1
position: 1764195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1764382:1
position: 1764382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1766983-1767114:1:exon

position:1766983:1
position: 1766983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1767114:1
position: 1767114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1782712-1782778:1:exon

position:1782712:1
position: 1782712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1782778:1
position: 1782778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1789600-1789664:1:exon

position:1789600:1
position: 1789600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1789664:1
position: 1789664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1798714-1799422:1:exon

position:1798714:1
position: 1798714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SWT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SWT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional protein SWT1
translation: MLQLFKMSGRESCGKIETSQRRSTTSSPDSDEKSDQQDILCCNTKRRQNLKRLSIDIDTPRKRLKINSSPQRPDKIQEAPHSSHNRIIARSPSSDGTKTDFRDTKWTDVRGNPDQGNPKIAREGSPKSAGQAAEKSWPAGAAERDKVRKHKRKRHGTLKDSSGKCAPFPFSQDSHSNKIIKETLESRRKISFKIPVRSCALQKSVEENVFSLDSEKSETKEEKGFLDCSRVSRDLIRCKPEHLFSDSTCKQTVEWEGTFRREPQQRGDSSSGGSVSESFEAVCSSASSGSIEDTDQEMQIVEELHAARVGHMIDLPVAPSAGELMSMDIDLVEDDARSTAANTASDRKLLIVVDTNILMNHLKFVRILSTTEIPGFDSLILIIPWVVVQELDRMKEGKLLKHAQAKAVPAVHFIHDSLRSKDRKLWGQSLQLASQRLYGLRDENNDDRVLKCCLQYQELFPCSLVTLCTDDRNLRNKGLISGVKSLSKEELSAELLSLSQNAEVCHQLLIAKQQGSTEATLLEKSSEKEPAASGLSILLESIVSDLEKSLGAALSSILETEMKIAFGTLWMEILYVKPPWTLIHLLRCFKKHWLAVFGLIMEKNLLVTIESIYENLCKANNSMDFTTVRFLLQDSKSLLHAFSTRSDYHGVLPQAFAQVSRLLQTLAEVKTKVKPSSSESTVNGKQEDACLMKSHHQESTVFSGSHVPQPSRHQEIWAILENVWISICQNSTDVFQRLGTNSALSTSSVASLEEAFLYLQKLMAAVKDILEGIQRILAPDSNYQDVETLFNFLIKYEVNKNVRFTVEELRDCLSQTEYREKLAIGYRQLLEMAHTMQQCSASVYMEARHRGWCEGLQAQP
SIO_010081: SWT1
subclass of: SO_0000673
so part of: SWT1
location: join(1719430..1719438,1722933..1723019,1729392..1729450,1733738..1734413,1737100..1737159,1738830..1738959,1740921..1741022,1741879..1742067,1743815..1743908,1750926..1751071,1752541..1752704,1754743..1754881,1757819..1757967,1764195..1764382,1766983..1767114,1782712..1782778,1789600..1789664,1798714..1798840)
location: region:1719430-1798840:1
so has part: feature:1719430-1719438:1:exon
so has part: feature:1722933-1723019:1:exon
so has part: feature:1729392-1729450:1:exon
so has part: feature:1733738-1734413:1:exon
so has part: feature:1737100-1737159:1:exon
so has part: feature:1738830-1738959:1:exon
so has part: feature:1740921-1741022:1:exon
so has part: feature:1741879-1742067:1:exon
so has part: feature:1743815-1743908:1:exon
so has part: feature:1750926-1751071:1:exon
so has part: feature:1752541-1752704:1:exon
so has part: feature:1754743-1754881:1:exon
so has part: feature:1757819-1757967:1:exon
so has part: feature:1764195-1764382:1:exon
so has part: feature:1766983-1767114:1:exon
so has part: feature:1782712-1782778:1:exon
so has part: feature:1789600-1789664:1:exon
so has part: feature:1798714-1798840:1:exon

XP_012786091.1
type: Protein
SIO_000068: ncbiprotein

position:1719430:1
position: 1719430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1798840:1
position: 1798840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1719430-1719438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1722933-1723019:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1729392-1729450:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1733738-1734413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1737100-1737159:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1738830-1738959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1740921-1741022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741879-1742067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1743815-1743908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1750926-1751071:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1752541-1752704:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1754743-1754881:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1757819-1757967:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1764195-1764382:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1766983-1767114:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1782712-1782778:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1789600-1789664:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1798714-1798840:1:exon

LOC101517624
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101517624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1804833..1815899)
location: region:1804833-1815899:-1
so has part: feature:1804833-1815899:-1:exon
subclass of: SO_0000010

101517624
type: Gene
SIO_000068: ncbigene

position:1804833:-1
position: 1804833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815899:-1
position: 1815899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1804833-1815899:-1:exon

LOC101517624
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101517624
product: influenza virus NS1A binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578825.2
SIO_010081: LOC101517624
subclass of: SO_0000673
so part of: LOC101517624
location: complement(join(1804833..1805542,1806656..1806829,1806924..1807182,1807264..1807385,1807571..1807795,1808019..1808133,1812519..1812626,1814141..1814314,1815216..1815291,1815420..1815589,1815767..1815899))
location: region:1804833-1815899:-1
so has part: feature:1815767-1815899:-1:exon
so has part: feature:1815420-1815589:-1:exon
so has part: feature:1815216-1815291:-1:exon
so has part: feature:1814141-1814314:-1:exon
so has part: feature:1812519-1812626:-1:exon
so has part: feature:1808019-1808133:-1:exon
so has part: feature:1807571-1807795:-1:exon
so has part: feature:1807264-1807385:-1:exon
so has part: feature:1806924-1807182:-1:exon
so has part: feature:1806656-1806829:-1:exon
so has part: feature:1804833-1805542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1815767-1815899:-1:exon

position:1815767:-1
position: 1815767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1815420-1815589:-1:exon

position:1815420:-1
position: 1815420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815589:-1
position: 1815589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1815216-1815291:-1:exon

position:1815216:-1
position: 1815216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815291:-1
position: 1815291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1814141-1814314:-1:exon

position:1814141:-1
position: 1814141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1814314:-1
position: 1814314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1812519-1812626:-1:exon

position:1812519:-1
position: 1812519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1812626:-1
position: 1812626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1808019-1808133:-1:exon

position:1808019:-1
position: 1808019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808133:-1
position: 1808133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1807571-1807795:-1:exon

position:1807571:-1
position: 1807571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1807795:-1
position: 1807795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1807264-1807385:-1:exon

position:1807264:-1
position: 1807264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1807385:-1
position: 1807385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1806924-1807182:-1:exon

position:1806924:-1
position: 1806924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1807182:-1
position: 1807182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1806656-1806829:-1:exon

position:1806656:-1
position: 1806656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1806829:-1
position: 1806829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1804833-1805542:-1:exon

position:1805542:-1
position: 1805542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101517624
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101517624
product: influenza virus NS1A binding protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036495331.1
SIO_010081: LOC101517624
subclass of: SO_0000673
so part of: LOC101517624
location: complement(join(1804833..1805542,1806656..1806829,1806924..1807182,1807264..1807385,1807571..1807795,1808019..1808133,1812519..1812626,1813894..1813899,1814141..1814314,1815216..1815291,1815420..1815589,1815767..1815899))
location: region:1804833-1815899:-1
so has part: feature:1815767-1815899:-1:exon
so has part: feature:1815420-1815589:-1:exon
so has part: feature:1815216-1815291:-1:exon
so has part: feature:1814141-1814314:-1:exon
so has part: feature:1813894-1813899:-1:exon
so has part: feature:1812519-1812626:-1:exon
so has part: feature:1808019-1808133:-1:exon
so has part: feature:1807571-1807795:-1:exon
so has part: feature:1807264-1807385:-1:exon
so has part: feature:1806924-1807182:-1:exon
so has part: feature:1806656-1806829:-1:exon
so has part: feature:1804833-1805542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1815767-1815899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1815420-1815589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1815216-1815291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1814141-1814314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1813894-1813899:-1:exon

position:1813894:-1
position: 1813894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1813899:-1
position: 1813899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1812519-1812626:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1808019-1808133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1807571-1807795:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1807264-1807385:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1806924-1807182:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1806656-1806829:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1804833-1805542:-1:exon

LOC101517624
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101517624
product: influenza virus NS1A binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 12 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578824.2
SIO_010081: LOC101517624
subclass of: SO_0000673
so part of: LOC101517624
location: complement(join(1804833..1805542,1806656..1806829,1806924..1807182,1807264..1807385,1807571..1807795,1808019..1808133,1812519..1812626,1813774..1813899,1814141..1814314,1815216..1815291,1815420..1815589,1815767..1815899))
location: region:1804833-1815899:-1
so has part: feature:1815767-1815899:-1:exon
so has part: feature:1815420-1815589:-1:exon
so has part: feature:1815216-1815291:-1:exon
so has part: feature:1814141-1814314:-1:exon
so has part: feature:1813774-1813899:-1:exon
so has part: feature:1812519-1812626:-1:exon
so has part: feature:1808019-1808133:-1:exon
so has part: feature:1807571-1807795:-1:exon
so has part: feature:1807264-1807385:-1:exon
so has part: feature:1806924-1807182:-1:exon
so has part: feature:1806656-1806829:-1:exon
so has part: feature:1804833-1805542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1815767-1815899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1815420-1815589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1815216-1815291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1814141-1814314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1813774-1813899:-1:exon

position:1813774:-1
position: 1813774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1812519-1812626:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1808019-1808133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1807571-1807795:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1807264-1807385:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1806924-1807182:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1806656-1806829:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1804833-1805542:-1:exon

LOC101517624
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101517624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: influenza virus NS1A-binding protein isoform X2
translation: MIPNGYLMFEDENFIESSVAKLNALRKSGQFCDVRLQVCGHEMLAHRAVLACCSPYLFEIFNSDSDPHGVSHVKLDDLNPEAVEVLLNYAYTAQLKADKELVKDVYSAAKKLKMDRVKQVCGDYLLSRMDITSCISYRNFASCMGDSRLLNKVDAYIQEHLLQISEEEEFLKLPRLKVQTLYYSAHHKLLDGNLLEGQAEVFGSDDDHIQFVQKKPPRENGHKQLSGSSTGCLSSPSPKHEWKIVASEKTSNNTYLCLAVLDGIFCVIFLHGRNSPQSSPTSTPKLIKSLSFEVHPDELIEKAMSPMQYARSGLGTAEMNGRLIAAGGYNREECLRTVECYDPRTDHWSFLAPMRTPRARFQMAVLMGRLYVVGGSNGHSDDLSCGEMYDPNLDDWTPVPELRTNRCNAGVCALNGKLYIVGGSDPYGQKGLKNCDVFDPVTKVWTSCAPLNIRRHQSAVCELGGYLYIIGGAESWNCLNTVERYNPENNTWSLIAPMNVARRGAGVAVLDGKLFVGGGFDGSHAISCVEMYDPARNEWKVMGNMTSPRSNAGVTTVGNTIYAVGGFDGNEFLNTVEVYNLEANEWSPYTKIFQF
SIO_010081: LOC101517624
subclass of: SO_0000673
so part of: LOC101517624
location: complement(join(1805289..1805542,1806656..1806829,1806924..1807182,1807264..1807385,1807571..1807795,1808019..1808133,1812519..1812626,1814141..1814314,1815216..1815291,1815420..1815589,1815767..1815877))
location: region:1805289-1815877:-1
so has part: feature:1815767-1815877:-1:exon
so has part: feature:1815420-1815589:-1:exon
so has part: feature:1815216-1815291:-1:exon
so has part: feature:1814141-1814314:-1:exon
so has part: feature:1812519-1812626:-1:exon
so has part: feature:1808019-1808133:-1:exon
so has part: feature:1807571-1807795:-1:exon
so has part: feature:1807264-1807385:-1:exon
so has part: feature:1806924-1807182:-1:exon
so has part: feature:1806656-1806829:-1:exon
so has part: feature:1805289-1805542:-1:exon

XP_004578882.1
type: Protein
SIO_000068: ncbiprotein

position:1805289:-1
position: 1805289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815877:-1
position: 1815877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1815767-1815877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1815420-1815589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1815216-1815291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1814141-1814314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1812519-1812626:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1808019-1808133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1807571-1807795:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1807264-1807385:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1806924-1807182:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1806656-1806829:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1805289-1805542:-1:exon

LOC101517624
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101517624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: influenza virus NS1A-binding protein isoform X3
translation: MIPNGYLMFEDENFIESSVAKLNALRKSGQFCDVRLQVCGHEMLAHRAVLACCSPYLFEIFNSDSDPHGVSHVKLDDLNPEAVEVLLNYAYTAQLKADKELVKDVYSAAKKLKMDRVKQVCGDYLLSRMDITSCISYRNFASCMGDSRLLNKVDAYIQEHLLQISEEEEFLKLPRLKLEVQTLYYSAHHKLLDGNLLEGQAEVFGSDDDHIQFVQKKPPRENGHKQLSGSSTGCLSSPSPKHEWKIVASEKTSNNTYLCLAVLDGIFCVIFLHGRNSPQSSPTSTPKLIKSLSFEVHPDELIEKAMSPMQYARSGLGTAEMNGRLIAAGGYNREECLRTVECYDPRTDHWSFLAPMRTPRARFQMAVLMGRLYVVGGSNGHSDDLSCGEMYDPNLDDWTPVPELRTNRCNAGVCALNGKLYIVGGSDPYGQKGLKNCDVFDPVTKVWTSCAPLNIRRHQSAVCELGGYLYIIGGAESWNCLNTVERYNPENNTWSLIAPMNVARRGAGVAVLDGKLFVGGGFDGSHAISCVEMYDPARNEWKVMGNMTSPRSNAGVTTVGNTIYAVGGFDGNEFLNTVEVYNLEANEWSPYTKIFQF
SIO_010081: LOC101517624
subclass of: SO_0000673
so part of: LOC101517624
location: complement(join(1805289..1805542,1806656..1806829,1806924..1807182,1807264..1807385,1807571..1807795,1808019..1808133,1812519..1812626,1813894..1813899,1814141..1814314,1815216..1815291,1815420..1815589,1815767..1815877))
location: region:1805289-1815877:-1
so has part: feature:1815767-1815877:-1:exon
so has part: feature:1815420-1815589:-1:exon
so has part: feature:1815216-1815291:-1:exon
so has part: feature:1814141-1814314:-1:exon
so has part: feature:1813894-1813899:-1:exon
so has part: feature:1812519-1812626:-1:exon
so has part: feature:1808019-1808133:-1:exon
so has part: feature:1807571-1807795:-1:exon
so has part: feature:1807264-1807385:-1:exon
so has part: feature:1806924-1807182:-1:exon
so has part: feature:1806656-1806829:-1:exon
so has part: feature:1805289-1805542:-1:exon

XP_036351224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1815767-1815877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1815420-1815589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1815216-1815291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1814141-1814314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1813894-1813899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1812519-1812626:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1808019-1808133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1807571-1807795:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1807264-1807385:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1806924-1807182:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1806656-1806829:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1805289-1805542:-1:exon

LOC101517624
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101517624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: influenza virus NS1A-binding protein isoform X1
translation: MIPNGYLMFEDENFIESSVAKLNALRKSGQFCDVRLQVCGHEMLAHRAVLACCSPYLFEIFNSDSDPHGVSHVKLDDLNPEAVEVLLNYAYTAQLKADKELVKDVYSAAKKLKMDRVKQVCGDYLLSRMDITSCISYRNFASCMGDSRLLNKVDAYIQEHLLQISEEEEFLKLPRLKLEVMLEENVCLPSNGKLYTKVINWVQRSIWENGDSLEKLLEEVQTLYYSAHHKLLDGNLLEGQAEVFGSDDDHIQFVQKKPPRENGHKQLSGSSTGCLSSPSPKHEWKIVASEKTSNNTYLCLAVLDGIFCVIFLHGRNSPQSSPTSTPKLIKSLSFEVHPDELIEKAMSPMQYARSGLGTAEMNGRLIAAGGYNREECLRTVECYDPRTDHWSFLAPMRTPRARFQMAVLMGRLYVVGGSNGHSDDLSCGEMYDPNLDDWTPVPELRTNRCNAGVCALNGKLYIVGGSDPYGQKGLKNCDVFDPVTKVWTSCAPLNIRRHQSAVCELGGYLYIIGGAESWNCLNTVERYNPENNTWSLIAPMNVARRGAGVAVLDGKLFVGGGFDGSHAISCVEMYDPARNEWKVMGNMTSPRSNAGVTTVGNTIYAVGGFDGNEFLNTVEVYNLEANEWSPYTKIFQF
SIO_010081: LOC101517624
subclass of: SO_0000673
so part of: LOC101517624
location: complement(join(1805289..1805542,1806656..1806829,1806924..1807182,1807264..1807385,1807571..1807795,1808019..1808133,1812519..1812626,1813774..1813899,1814141..1814314,1815216..1815291,1815420..1815589,1815767..1815877))
location: region:1805289-1815877:-1
so has part: feature:1815767-1815877:-1:exon
so has part: feature:1815420-1815589:-1:exon
so has part: feature:1815216-1815291:-1:exon
so has part: feature:1814141-1814314:-1:exon
so has part: feature:1813774-1813899:-1:exon
so has part: feature:1812519-1812626:-1:exon
so has part: feature:1808019-1808133:-1:exon
so has part: feature:1807571-1807795:-1:exon
so has part: feature:1807264-1807385:-1:exon
so has part: feature:1806924-1807182:-1:exon
so has part: feature:1806656-1806829:-1:exon
so has part: feature:1805289-1805542:-1:exon

XP_004578881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1815767-1815877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1815420-1815589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1815216-1815291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1814141-1814314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1813774-1813899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1812519-1812626:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1808019-1808133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1807571-1807795:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1807264-1807385:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1806924-1807182:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1806656-1806829:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1805289-1805542:-1:exon

HMCN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: HMCN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2036450..2398247
location: region:2036450-2398247:1
so has part: feature:2036450-2398247:1:exon
subclass of: SO_0000010

101521202
type: Gene
SIO_000068: ncbigene

position:2036450:1
position: 2036450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398247:1
position: 2398247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2036450-2398247:1:exon

HMCN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: HMCN1
product: hemicentin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 1% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036495278.1
SIO_010081: HMCN1
subclass of: SO_0000673
so part of: HMCN1
location: join(2036450..2036571,2036841..2036930,2039524..2039686,2043066..2043312,2116691..2116761,2135901..2136059,2137039..2137161,2160244..2160415,2161947..2162053,2173654..2173774,2175809..2176072,2177451..2177595,2181274..2181395,2185689..2185964,2201920..2202061,2203486..2203613,2204458..2204571,2208323..2208481,2215232..2215426,2216576..2216671,2217734..2217861,2219130..2219274,2224246..2224358,2226007..2226166,2226751..2226919,2229318..2229445,2231595..2231867,2232708..2232803,2234715..2234909,2236139..2236269,2236363..2236510,2236759..2236885,2241375..2241529,2246576..2246833,2247352..2247633,2248833..2248944,2250134..2250303,2251171..2251325,2254608..2254731,2263244..2263345,2264036..2264212,2264835..2264986,2265660..2265783,2272173..2272348,2273331..2273427,2278618..2278740,2279635..2279796,2281267..2281548,2282748..2282915,2286008..2286121,2286693..2286779,2288270..2288461,2291596..2291769,2293239..2293352,2293985..2294130,2298134..2298284,2299518..2299712,2301053..2301166,2304140..2304327,2305294..2305390,2308554..2308715,2309466..2309579,2309858..2310060,2310294..2310375,2310480..2310611,2311210..2311359,2312996..2313155,2315153..2315277,2315448..2315631,2316190..2316287,2318424..2318702,2322621..2322817,2326113..2326194,2327704..2327840,2332446..2332587,2333518..2333662,2333988..2334115,2334388..2334544,2336066..2336187,2336359..2336523,2338674..2338781,2339159..2339296,2339412..2339546,2341501..2341770,2345666..2345856,2348461..2348674,2351903..2352037,2352430..2352620,2354175..2354256,2357217..2357486,2358026..2358196,2358330..2358500,2364015..2364185,2364327..2364497,2365224..2365394,2365555..2365725,2369866..2370015,2370425..2370562,2372156..2372277,2372836..2373073,2377632..2377694,2378611..2378730,2379112..2379246,2380598..2380711,2381544..2381669,2383279..2383407,2387588..2387935,2391935..2392054,2396509..2396635,2397881..2398247)
location: region:2036450-2398247:1
so has part: feature:2036450-2036571:1:exon
so has part: feature:2036841-2036930:1:exon
so has part: feature:2039524-2039686:1:exon
so has part: feature:2043066-2043312:1:exon
so has part: feature:2116691-2116761:1:exon
so has part: feature:2135901-2136059:1:exon
so has part: feature:2137039-2137161:1:exon
so has part: feature:2160244-2160415:1:exon
so has part: feature:2161947-2162053:1:exon
so has part: feature:2173654-2173774:1:exon
so has part: feature:2175809-2176072:1:exon
so has part: feature:2177451-2177595:1:exon
so has part: feature:2181274-2181395:1:exon
so has part: feature:2185689-2185964:1:exon
so has part: feature:2201920-2202061:1:exon
so has part: feature:2203486-2203613:1:exon
so has part: feature:2204458-2204571:1:exon
so has part: feature:2208323-2208481:1:exon
so has part: feature:2215232-2215426:1:exon
so has part: feature:2216576-2216671:1:exon
so has part: feature:2217734-2217861:1:exon
so has part: feature:2219130-2219274:1:exon
so has part: feature:2224246-2224358:1:exon
so has part: feature:2226007-2226166:1:exon
so has part: feature:2226751-2226919:1:exon
so has part: feature:2229318-2229445:1:exon
so has part: feature:2231595-2231867:1:exon
so has part: feature:2232708-2232803:1:exon
so has part: feature:2234715-2234909:1:exon
so has part: feature:2236139-2236269:1:exon
so has part: feature:2236363-2236510:1:exon
so has part: feature:2236759-2236885:1:exon
so has part: feature:2241375-2241529:1:exon
so has part: feature:2246576-2246833:1:exon
so has part: feature:2247352-2247633:1:exon
so has part: feature:2248833-2248944:1:exon
so has part: feature:2250134-2250303:1:exon
so has part: feature:2251171-2251325:1:exon
so has part: feature:2254608-2254731:1:exon
so has part: feature:2263244-2263345:1:exon
so has part: feature:2264036-2264212:1:exon
so has part: feature:2264835-2264986:1:exon
so has part: feature:2265660-2265783:1:exon
so has part: feature:2272173-2272348:1:exon
so has part: feature:2273331-2273427:1:exon
so has part: feature:2278618-2278740:1:exon
so has part: feature:2279635-2279796:1:exon
so has part: feature:2281267-2281548:1:exon
so has part: feature:2282748-2282915:1:exon
so has part: feature:2286008-2286121:1:exon
so has part: feature:2286693-2286779:1:exon
so has part: feature:2288270-2288461:1:exon
so has part: feature:2291596-2291769:1:exon
so has part: feature:2293239-2293352:1:exon
so has part: feature:2293985-2294130:1:exon
so has part: feature:2298134-2298284:1:exon
so has part: feature:2299518-2299712:1:exon
so has part: feature:2301053-2301166:1:exon
so has part: feature:2304140-2304327:1:exon
so has part: feature:2305294-2305390:1:exon
so has part: feature:2308554-2308715:1:exon
so has part: feature:2309466-2309579:1:exon
so has part: feature:2309858-2310060:1:exon
so has part: feature:2310294-2310375:1:exon
so has part: feature:2310480-2310611:1:exon
so has part: feature:2311210-2311359:1:exon
so has part: feature:2312996-2313155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2036450-2036571:1:exon

position:2036571:1
position: 2036571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2036841-2036930:1:exon

position:2036841:1
position: 2036841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2036930:1
position: 2036930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2039524-2039686:1:exon

position:2039524:1
position: 2039524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2039686:1
position: 2039686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2043066-2043312:1:exon

position:2043066:1
position: 2043066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2043312:1
position: 2043312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2116691-2116761:1:exon

position:2116691:1
position: 2116691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2116761:1
position: 2116761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2135901-2136059:1:exon

position:2135901:1
position: 2135901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2136059:1
position: 2136059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2137039-2137161:1:exon

position:2137039:1
position: 2137039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2137161:1
position: 2137161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2160244-2160415:1:exon

position:2160244:1
position: 2160244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2160415:1
position: 2160415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2161947-2162053:1:exon

position:2161947:1
position: 2161947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2162053:1
position: 2162053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2173654-2173774:1:exon

position:2173654:1
position: 2173654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2173774:1
position: 2173774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2175809-2176072:1:exon

position:2175809:1
position: 2175809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2176072:1
position: 2176072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2177451-2177595:1:exon

position:2177451:1
position: 2177451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2177595:1
position: 2177595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2181274-2181395:1:exon

position:2181274:1
position: 2181274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2181395:1
position: 2181395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2185689-2185964:1:exon

position:2185689:1
position: 2185689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2185964:1
position: 2185964
reference: sequence
type: ForwardStrandPosition
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position:2357486:1
position: 2357486
reference: sequence
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urn:…
SIO_000300: 91
SIO_000628: feature:2358026-2358196:1:exon

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position: 2358026
reference: sequence
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position:2358196:1
position: 2358196
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 92
SIO_000628: feature:2358330-2358500:1:exon

position:2358330:1
position: 2358330
reference: sequence
type: ForwardStrandPosition
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position:2358500:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 93
SIO_000628: feature:2364015-2364185:1:exon

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position: 2364015
reference: sequence
type: ForwardStrandPosition
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position:2364185:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 94
SIO_000628: feature:2364327-2364497:1:exon

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reference: sequence
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position:2364497:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 95
SIO_000628: feature:2365224-2365394:1:exon

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position: 2365224
reference: sequence
type: ForwardStrandPosition
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position:2365394:1
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urn:…
SIO_000300: 96
SIO_000628: feature:2365555-2365725:1:exon

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position: 2365555
reference: sequence
type: ForwardStrandPosition
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position:2365725:1
position: 2365725
reference: sequence
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urn:…
SIO_000300: 97
SIO_000628: feature:2369866-2370015:1:exon

position:2369866:1
position: 2369866
reference: sequence
type: ForwardStrandPosition
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position:2370015:1
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urn:…
SIO_000300: 98
SIO_000628: feature:2370425-2370562:1:exon

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reference: sequence
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 99
SIO_000628: feature:2372156-2372277:1:exon

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reference: sequence
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position:2372277:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 100
SIO_000628: feature:2372836-2373073:1:exon

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position: 2372836
reference: sequence
type: ForwardStrandPosition
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position:2373073:1
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urn:…
SIO_000300: 101
SIO_000628: feature:2377632-2377694:1:exon

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urn:…
SIO_000300: 102
SIO_000628: feature:2378611-2378730:1:exon

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position: 2378611
reference: sequence
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position:2378730:1
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urn:…
SIO_000300: 103
SIO_000628: feature:2379112-2379246:1:exon

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reference: sequence
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position:2379246:1
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reference: sequence
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urn:…
SIO_000300: 104
SIO_000628: feature:2380598-2380711:1:exon

position:2380598:1
position: 2380598
reference: sequence
type: ForwardStrandPosition
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position:2380711:1
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reference: sequence
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urn:…
SIO_000300: 105
SIO_000628: feature:2381544-2381669:1:exon

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position: 2381544
reference: sequence
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reference: sequence
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urn:…
SIO_000300: 106
SIO_000628: feature:2383279-2383407:1:exon

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reference: sequence
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position:2383407:1
position: 2383407
reference: sequence
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urn:…
SIO_000300: 107
SIO_000628: feature:2387588-2387935:1:exon

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position: 2387588
reference: sequence
type: ForwardStrandPosition
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position:2387935:1
position: 2387935
reference: sequence
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urn:…
SIO_000300: 108
SIO_000628: feature:2391935-2392054:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:2392054:1
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reference: sequence
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urn:…
SIO_000300: 109
SIO_000628: feature:2396509-2396635:1:exon

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position: 2396509
reference: sequence
type: ForwardStrandPosition
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position:2396635:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 110
SIO_000628: feature:2397881-2398247:1:exon

position:2397881:1
position: 2397881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMCN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: HMCN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hemicentin-1
translation: MINSAVRDKNIEFLFHKNEKNSTVFMKINDTVLILNEFMTVERMDQRQREKQVSEDKRTHCGTTEDELTSVLGVRHCRPDQTPFQVSVSSRLRNILLQASTISTEAEEQGSHGGLSHVLSRVFNSAAALLLALLGSALAGDASPEADAGARDVPEGASTLAFVFDVTGSMYDDLVQVIEGASKILETSLKRPKRPLYNFALVPFHDPEIGPVTITTDPKKFQFELRELYVQGGGDCPEMSIGAIKIALEISLPGSFIYVFTDARSKDYRLTHEVLQLIQQKQSQVVFVLTGDCDDRSHIGYKVYEEIASTSSGQVFHLDKKQVNEVLKWVEEAVQASKVHLLSTDHLEQAVNTWKIPLDPSLREVTVSLSGPSPAIEIRNPLGKLIKKGFGLNELLNIHNSARVVSVLEPAAGIWTVKTSSSGRHSVRISGLSTLDFRAGFARKPTLDFTQTASRPVQGIPTYVLLNTSGLSVPARVDHLELLSVSGSSLMTLPVKYYPDRKPYGIWNVSDFIPPDEAFFLKVAGYDKDDYLFQRVSSVSFSSIVPDAPKVTMPRKSPGYYLQPGRIPCSVESLLPFTVSFVRNGVTLGIEQNLKEPATVTWDIEQVTLADEGPYECIAVSSAGTGRAQTFLDVSEPPPVIQVPNNVTAAPGERAVLTCVVSSVADYNLTWQKNGRDIRLAEPARASALANLSLELRSVKSGDAGEYRCVVSSDSGSSAASVFLTVQERPRVSVTPRNQSFTGGSEVSIRCSATGYPRPAVSWTFNSLFITSSHRYRTTSDGTLVIRNALPRDAGIYACLASNSAGMDKQTSILSYMEAPELTVVRGELLVALGDTTVMECKASGVPPPQVKWFKGDLELRPSAFLIMDPLLGLLKIQETQDLDAGDYTCVAINDAGRATGRITLDVGSPPVFIQEPADVSVELGSNVTLPCYVQGFPEPRIKWRRSDGVSLFSRPMSVSSISQLRTGALSILNLWASDRGTYICEAENQFGKIQSQTTVTVTGLVAPLVGISPSVASVVEGQQLTLPCTLLAGNPIPERRWIKNSAVLVQNPYVTVRGDGSLHIERVRLQDGGQYTCVASSVAGSSNRTTSVVVHVLPTIQHGQQTLSTIEGVPVTLPCKASGIPQPTITWSKQGEPIAIDGARFSAGAEGSLSVLSPGAQESGEYVCTATNAAGHARRKVQLTVYVRPRVFGEQRGPSHEQPVEISVLAGEEATLPCEVKSLPPPVITWAKETQLISPFSPRHTFLSSGSMKIAETRMADTGMYLCVATNIAGSVTQSVKLNVHVPPKIQRGPKHVKVQVGQSVNIPCSAQGTPSPVVSWVKEGRSVPLDGVWPLSRPDGTLSFDRATLSDAGLYTCVATNIAGSDEVETTLLVQEPPTVEVLEPPFNTPFQERVANQRIAFPCPAKGTPKPTITWLHNGQQLTGREPGISILEGGALLVIASVAPSDRGDYICVAVSEAGTTERKYNLQVHVPPVIKEKEQVANLSVLVSQLTSLSCEAEGAPPPMVMWYKDGVLVTESSTVRTTNNGRTLKLLTATAEDTGRYSCKAVNVAGTSQKDFNINVLVPPSVTGASSTDDVAVILSHNVTLECLVTGTPFPDIHWFKDGKPLFLEDPNIELVDRGQILHVKNARRSDKGRYQCAVSNAAGKQVKEMKLSVYLPPSIKGGNITRVSALINSVIKLECETRGLPVPTVTWYKDSQPVSASSQGQLLHIPRAQASDSATYTCRVSNVAGTAEKSFHVEVYVPPVIEGASATPVSKQVLLARSLTLECKASGSPPPALTWLKDGAPVRAGDNVHVEAGGQRLKLLSAAELDRGQYVCLASSVAGEKQIKYEVAVLVPPTVEGGEETSYFIVIIDNLLELDCPVTAGSPPPTITWLKDGQLIDESDGFRILLDGRKLAITQAQVSDTGLYRCVATNAAGDHGKAFEVTVHVPPTIKSSGVPERTVLKHRAVTLQCVANGVPQPSLTWLKDDQPVSTAQGSLQIQSSGRVLHIAQT…
SIO_010081: HMCN1
subclass of: SO_0000673
so part of: HMCN1
location: join(2036450..2036571,2036841..2036930,2039524..2039686,2043066..2043312,2116691..2116761,2135901..2136059,2137039..2137161,2160244..2160415,2161947..2162053,2173654..2173774,2175809..2176072,2177451..2177595,2181274..2181395,2185689..2185964,2201920..2202061,2203486..2203613,2204458..2204571,2208323..2208481,2215232..2215426,2216576..2216671,2217734..2217861,2219130..2219274,2224246..2224358,2226007..2226166,2226751..2226919,2229318..2229445,2231595..2231867,2232708..2232803,2234715..2234909,2236139..2236269,2236363..2236510,2236759..2236885,2241375..2241529,2246576..2246833,2247352..2247633,2248833..2248944,2250134..2250303,2251171..2251325,2254608..2254731,2263244..2263345,2264036..2264212,2264835..2264986,2265660..2265783,2272173..2272348,2273331..2273427,2278618..2278740,2279635..2279796,2281267..2281548,2282748..2282915,2286008..2286121,2286693..2286779,2288270..2288461,2291596..2291769,2293239..2293352,2293985..2294130,2298134..2298284,2299518..2299712,2301053..2301166,2304140..2304327,2305294..2305390,2308554..2308715,2309466..2309579,2309858..2310060,2310294..2310375,2310480..2310611,2311210..2311359,2312996..2313155,2315153..2315277,2315448..2315631,2316190..2316287,2318424..2318702,2322621..2322817,2326113..2326194,2327704..2327840,2332446..2332587,2333518..2333662,2333988..2334115,2334388..2334544,2336066..2336187,2336359..2336523,2338674..2338781,2339159..2339296,2339412..2339546,2341501..2341770,2345666..2345856,2348461..2348674,2351903..2352037,2352430..2352620,2354175..2354256,2357217..2357486,2358026..2358196,2358330..2358500,2364015..2364185,2364327..2364497,2365224..2365394,2365555..2365725,2369866..2370015,2370425..2370562,2372156..2372277,2372836..2373073,2377632..2377694,2378611..2378730,2379112..2379246,2380598..2380711,2381544..2381669,2383279..2383407,2387588..2387935,2391935..2392054,2396509..2396635,2397881..2398247)
location: region:2036450-2398247:1
so has part: feature:2036450-2036571:1:exon
so has part: feature:2036841-2036930:1:exon
so has part: feature:2039524-2039686:1:exon
so has part: feature:2043066-2043312:1:exon
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so has part: feature:2310294-2310375:1:exon
so has part: feature:2310480-2310611:1:exon
so has part: feature:2311210-2311359:1:exon

XP_036351171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2036450-2036571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2036841-2036930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2039524-2039686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2043066-2043312:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2116691-2116761:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2135901-2136059:1:exon

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SIO_000300: 7
SIO_000628: feature:2137039-2137161:1:exon

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SIO_000300: 8
SIO_000628: feature:2160244-2160415:1:exon

urn:…
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SIO_000628: feature:2161947-2162053:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2173654-2173774:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2175809-2176072:1:exon

urn:…
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SIO_000628: feature:2177451-2177595:1:exon

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SIO_000628: feature:2181274-2181395:1:exon

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SIO_000628: feature:2185689-2185964:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2201920-2202061:1:exon

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SIO_000628: feature:2203486-2203613:1:exon

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SIO_000628: feature:2204458-2204571:1:exon

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SIO_000628: feature:2208323-2208481:1:exon

urn:…
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SIO_000628: feature:2217734-2217861:1:exon

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SIO_000628: feature:2219130-2219274:1:exon

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SIO_000628: feature:2224246-2224358:1:exon

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SIO_000628: feature:2226007-2226166:1:exon

urn:…
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SIO_000628: feature:2226751-2226919:1:exon

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SIO_000628: feature:2254608-2254731:1:exon

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SIO_000628: feature:2315448-2315631:1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:2316190-2316287:1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:2318424-2318702:1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:2322621-2322817:1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:2326113-2326194:1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:2327704-2327840:1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:2332446-2332587:1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:2333518-2333662:1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:2333988-2334115:1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:2334388-2334544:1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:2336066-2336187:1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:2336359-2336523:1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:2338674-2338781:1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:2339159-2339296:1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:2339412-2339546:1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:2341501-2341770:1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:2345666-2345856:1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:2348461-2348674:1:exon

urn:…
SIO_000300: 87
SIO_000628: feature:2351903-2352037:1:exon

urn:…
SIO_000300: 88
SIO_000628: feature:2352430-2352620:1:exon

urn:…
SIO_000300: 89
SIO_000628: feature:2354175-2354256:1:exon

urn:…
SIO_000300: 90
SIO_000628: feature:2357217-2357486:1:exon

urn:…
SIO_000300: 91
SIO_000628: feature:2358026-2358196:1:exon

urn:…
SIO_000300: 92
SIO_000628: feature:2358330-2358500:1:exon

urn:…
SIO_000300: 93
SIO_000628: feature:2364015-2364185:1:exon

urn:…
SIO_000300: 94
SIO_000628: feature:2364327-2364497:1:exon

urn:…
SIO_000300: 95
SIO_000628: feature:2365224-2365394:1:exon

urn:…
SIO_000300: 96
SIO_000628: feature:2365555-2365725:1:exon

urn:…
SIO_000300: 97
SIO_000628: feature:2369866-2370015:1:exon

urn:…
SIO_000300: 98
SIO_000628: feature:2370425-2370562:1:exon

urn:…
SIO_000300: 99
SIO_000628: feature:2372156-2372277:1:exon

urn:…
SIO_000300: 100
SIO_000628: feature:2372836-2373073:1:exon

urn:…
SIO_000300: 101
SIO_000628: feature:2377632-2377694:1:exon

urn:…
SIO_000300: 102
SIO_000628: feature:2378611-2378730:1:exon

urn:…
SIO_000300: 103
SIO_000628: feature:2379112-2379246:1:exon

urn:…
SIO_000300: 104
SIO_000628: feature:2380598-2380711:1:exon

urn:…
SIO_000300: 105
SIO_000628: feature:2381544-2381669:1:exon

urn:…
SIO_000300: 106
SIO_000628: feature:2383279-2383407:1:exon

urn:…
SIO_000300: 107
SIO_000628: feature:2387588-2387935:1:exon

urn:…
SIO_000300: 108
SIO_000628: feature:2391935-2392054:1:exon

urn:…
SIO_000300: 109
SIO_000628: feature:2396509-2396635:1:exon

urn:…
SIO_000300: 110
SIO_000628: feature:2397881-2398247:1:exon

PRG4
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2461646..2475899
location: region:2461646-2475899:1
so has part: feature:2461646-2475899:1:exon
subclass of: SO_0000010

101517374
type: Gene
SIO_000068: ncbigene

position:2461646:1
position: 2461646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2475899:1
position: 2475899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2461646-2475899:1:exon

PRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PRG4
product: proteoglycan 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036495344.1
SIO_010081: PRG4
subclass of: SO_0000673
so part of: PRG4
location: join(2461646..2461707,2462245..2462345,2464424..2464546,2465632..2465751,2467722..2467871,2468417..2468536,2469772..2470916,2471378..2472128,2472681..2472758,2473377..2473513,2474293..2474449,2474549..2474761,2475140..2475265,2475704..2475899)
location: region:2461646-2475899:1
so has part: feature:2461646-2461707:1:exon
so has part: feature:2462245-2462345:1:exon
so has part: feature:2464424-2464546:1:exon
so has part: feature:2465632-2465751:1:exon
so has part: feature:2467722-2467871:1:exon
so has part: feature:2468417-2468536:1:exon
so has part: feature:2469772-2470916:1:exon
so has part: feature:2471378-2472128:1:exon
so has part: feature:2472681-2472758:1:exon
so has part: feature:2473377-2473513:1:exon
so has part: feature:2474293-2474449:1:exon
so has part: feature:2474549-2474761:1:exon
so has part: feature:2475140-2475265:1:exon
so has part: feature:2475704-2475899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2461646-2461707:1:exon

position:2461707:1
position: 2461707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2462245-2462345:1:exon

position:2462245:1
position: 2462245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2462345:1
position: 2462345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2464424-2464546:1:exon

position:2464424:1
position: 2464424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2464546:1
position: 2464546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2465632-2465751:1:exon

position:2465632:1
position: 2465632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2465751:1
position: 2465751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2467722-2467871:1:exon

position:2467722:1
position: 2467722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2467871:1
position: 2467871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2468417-2468536:1:exon

position:2468417:1
position: 2468417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2468536:1
position: 2468536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2469772-2470916:1:exon

position:2469772:1
position: 2469772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2470916:1
position: 2470916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2471378-2472128:1:exon

position:2471378:1
position: 2471378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2472128:1
position: 2472128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2472681-2472758:1:exon

position:2472681:1
position: 2472681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2472758:1
position: 2472758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2473377-2473513:1:exon

position:2473377:1
position: 2473377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2473513:1
position: 2473513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2474293-2474449:1:exon

position:2474293:1
position: 2474293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2474449:1
position: 2474449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2474549-2474761:1:exon

position:2474549:1
position: 2474549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2474761:1
position: 2474761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2475140-2475265:1:exon

position:2475140:1
position: 2475140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2475265:1
position: 2475265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2475704-2475899:1:exon

position:2475704:1
position: 2475704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteoglycan 4
translation: MEWRLLPAGLLLLCSAVLIPQASSKDLSSCAGRCGEGYSRDAICNCDYNCQHYTECCPDFKKVCTVELSCKGRCFESFARGRECDCDAQCKTYGKCCSDYEEFCQEVHNPTSPPTSKPAPLPPGAPQSIKSTTKRSPKSPNKKKTKKVIESEEITEEHSVSENQESSSSSSSSSTIRKVKSSKNSAANRELQKKPKVKDNKKKRTPKEEPSSKPPAADDTGSGLDSGDPKPTPTPDVSTTARSKVTSPPKATTVKPANPKPSSPPHPDKSKEKPPKTNKETTAETKTTETNKQMSTSAKEKTTSVKETRTADKTPAKDSTPAPKLPAKPTPKAETTTKAPVLTTPKEPAATTPKEAAPTTAKQAAPTTPKGAAPTTPKEPAPTTTKEPAPTTTKETAPTTTKEPAPTTPKQSAPTTTKEPAPTTPKEPAPTTPKEPAPSTPKEPAPSTPKEPAPTTTKEPAPTTTKEPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTTKELAPTTTKESAPTTTKEPTPTTTKEPAPTTTKEPTPTTTKEPAPNSPKEPAPDSPKEPAPDSPKQPAPDSPKXPAPDSPKQPAPDSPKEPAPDSPKQPAPDSPKQLAPDSPKEPAPDSPKAPALDSPKAPAPSTSQTPAATTTTQPPTQSNAEPSTPKATTSVPKITTATIMTTTTEESTNKPEESPDADTDTKATDAKPPKPTKAPKKPTSPQKPTKAPKKPISTRKPNASKVKKPKTTPTPSKTTTPSSSELNPTTVAGALLQTTTKPTSTQKVDVAEANPGEKPFVIPGPPGLIPLVIPGGGYLVREPSERIITSPMLSDETNLCNGKPVDGLTTLRNGTLVAFRGHYFWMLNPFQPPSPPRRITEVWGVPSPIDTVFTRCNCEGKTFFFKDSQYWRFTNDVRDVGYPKPIAKGFGGLTGKIVAALSIAKYKNRPESVYFFKRGGNIQQYTYKQEPVRKCPGRSPINYSVYGETAQVRRRRFERALGPQMQTIRIQYSPVRVQYPPVRVSYQDKGFLHNEVKVSTIWSGLPGLVTSAISLPNARKPDGYDYYAFSKDQYYNIDVPTRMARAITTRSGQTLSKIWYNCP
SIO_010081: PRG4
subclass of: SO_0000673
so part of: PRG4
location: join(2462270..2462345,2464424..2464546,2465632..2465751,2467722..2467871,2468417..2468536,2469772..2470916,2471378..2472128,2472681..2472758,2473377..2473513,2474293..2474449,2474549..2474761,2475140..2475265,2475704..2475801)
location: region:2462270-2475801:1
so has part: feature:2462270-2462345:1:exon
so has part: feature:2464424-2464546:1:exon
so has part: feature:2465632-2465751:1:exon
so has part: feature:2467722-2467871:1:exon
so has part: feature:2468417-2468536:1:exon
so has part: feature:2469772-2470916:1:exon
so has part: feature:2471378-2472128:1:exon
so has part: feature:2472681-2472758:1:exon
so has part: feature:2473377-2473513:1:exon
so has part: feature:2474293-2474449:1:exon
so has part: feature:2474549-2474761:1:exon
so has part: feature:2475140-2475265:1:exon
so has part: feature:2475704-2475801:1:exon

XP_036351237.1
type: Protein
SIO_000068: ncbiprotein

position:2462270:1
position: 2462270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2475801:1
position: 2475801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2462270-2462345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2464424-2464546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2465632-2465751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2467722-2467871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2468417-2468536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2469772-2470916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2471378-2472128:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2472681-2472758:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2473377-2473513:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2474293-2474449:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2474549-2474761:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2475140-2475265:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2475704-2475801:1:exon

TPR
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2475859..2527135)
location: region:2475859-2527135:-1
so has part: feature:2475859-2527135:-1:exon
subclass of: SO_0000010

101517126
type: Gene
SIO_000068: ncbigene

position:2475859:-1
position: 2475859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2527135:-1
position: 2527135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2475859-2527135:-1:exon

TPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TPR
product: translocated promoter region, nuclear basket protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578822.2
SIO_010081: TPR
subclass of: SO_0000673
so part of: TPR
location: complement(join(2475859..2476046,2476480..2476575,2478046..2478164,2479559..2479715,2479815..2479910,2481281..2481387,2482672..2482766,2482850..2482918,2483999..2484180,2487851..2487941,2488101..2488232,2488777..2488977,2491540..2491623,2492124..2492272,2492602..2492874,2494338..2494546,2495087..2495148,2495232..2495437,2496858..2497056,2497310..2497453,2498857..2499067,2499873..2500003,2500913..2501044,2501507..2501644,2502464..2502611,2503200..2503384,2503508..2503711,2505065..2505181,2505534..2505686,2506932..2507098,2508364..2508529,2509311..2509451,2510324..2510458,2511887..2512049,2512912..2513060,2513176..2513309,2513692..2513855,2514652..2514878,2515511..2515618,2517210..2517407,2518355..2518446,2518777..2518917,2519788..2519875,2519950..2520030,2520364..2520456,2520823..2520987,2521485..2521588,2522530..2522626,2525157..2525230,2525897..2526001,2526985..2527135))
location: region:2475859-2527135:-1
so has part: feature:2526985-2527135:-1:exon
so has part: feature:2525897-2526001:-1:exon
so has part: feature:2525157-2525230:-1:exon
so has part: feature:2522530-2522626:-1:exon
so has part: feature:2521485-2521588:-1:exon
so has part: feature:2520823-2520987:-1:exon
so has part: feature:2520364-2520456:-1:exon
so has part: feature:2519950-2520030:-1:exon
so has part: feature:2519788-2519875:-1:exon
so has part: feature:2518777-2518917:-1:exon
so has part: feature:2518355-2518446:-1:exon
so has part: feature:2517210-2517407:-1:exon
so has part: feature:2515511-2515618:-1:exon
so has part: feature:2514652-2514878:-1:exon
so has part: feature:2513692-2513855:-1:exon
so has part: feature:2513176-2513309:-1:exon
so has part: feature:2512912-2513060:-1:exon
so has part: feature:2511887-2512049:-1:exon
so has part: feature:2510324-2510458:-1:exon
so has part: feature:2509311-2509451:-1:exon
so has part: feature:2508364-2508529:-1:exon
so has part: feature:2506932-2507098:-1:exon
so has part: feature:2505534-2505686:-1:exon
so has part: feature:2505065-2505181:-1:exon
so has part: feature:2503508-2503711:-1:exon
so has part: feature:2503200-2503384:-1:exon
so has part: feature:2502464-2502611:-1:exon
so has part: feature:2501507-2501644:-1:exon
so has part: feature:2500913-2501044:-1:exon
so has part: feature:2499873-2500003:-1:exon
so has part: feature:2498857-2499067:-1:exon
so has part: feature:2497310-2497453:-1:exon
so has part: feature:2496858-2497056:-1:exon
so has part: feature:2495232-2495437:-1:exon
so has part: feature:2495087-2495148:-1:exon
so has part: feature:2494338-2494546:-1:exon
so has part: feature:2492602-2492874:-1:exon
so has part: feature:2492124-2492272:-1:exon
so has part: feature:2491540-2491623:-1:exon
so has part: feature:2488777-2488977:-1:exon
so has part: feature:2488101-2488232:-1:exon
so has part: feature:2487851-2487941:-1:exon
so has part: feature:2483999-2484180:-1:exon
so has part: feature:2482850-2482918:-1:exon
so has part: feature:2482672-2482766:-1:exon
so has part: feature:2481281-2481387:-1:exon
so has part: feature:2479815-2479910:-1:exon
so has part: feature:2479559-2479715:-1:exon
so has part: feature:2478046-2478164:-1:exon
so has part: feature:2476480-2476575:-1:exon
so has part: feature:2475859-2476046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2526985-2527135:-1:exon

position:2526985:-1
position: 2526985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2525897-2526001:-1:exon

position:2525897:-1
position: 2525897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2526001:-1
position: 2526001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2525157-2525230:-1:exon

position:2525157:-1
position: 2525157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2525230:-1
position: 2525230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2522530-2522626:-1:exon

position:2522530:-1
position: 2522530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2522626:-1
position: 2522626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2521485-2521588:-1:exon

position:2521485:-1
position: 2521485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2521588:-1
position: 2521588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2520823-2520987:-1:exon

position:2520823:-1
position: 2520823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2520987:-1
position: 2520987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2520364-2520456:-1:exon

position:2520364:-1
position: 2520364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2520456:-1
position: 2520456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2519950-2520030:-1:exon

position:2519950:-1
position: 2519950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2520030:-1
position: 2520030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2519788-2519875:-1:exon

position:2519788:-1
position: 2519788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2519875:-1
position: 2519875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2518777-2518917:-1:exon

position:2518777:-1
position: 2518777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2518917:-1
position: 2518917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2518355-2518446:-1:exon

position:2518355:-1
position: 2518355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2518446:-1
position: 2518446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2517210-2517407:-1:exon

position:2517210:-1
position: 2517210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2517407:-1
position: 2517407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2515511-2515618:-1:exon

position:2515511:-1
position: 2515511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2515618:-1
position: 2515618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2514652-2514878:-1:exon

position:2514652:-1
position: 2514652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2514878:-1
position: 2514878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2513692-2513855:-1:exon

position:2513692:-1
position: 2513692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2513855:-1
position: 2513855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2513176-2513309:-1:exon

position:2513176:-1
position: 2513176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2513309:-1
position: 2513309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2512912-2513060:-1:exon

position:2512912:-1
position: 2512912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2513060:-1
position: 2513060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2511887-2512049:-1:exon

position:2511887:-1
position: 2511887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2512049:-1
position: 2512049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2510324-2510458:-1:exon

position:2510324:-1
position: 2510324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2510458:-1
position: 2510458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2509311-2509451:-1:exon

position:2509311:-1
position: 2509311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2509451:-1
position: 2509451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2508364-2508529:-1:exon

position:2508364:-1
position: 2508364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2508529:-1
position: 2508529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2506932-2507098:-1:exon

position:2506932:-1
position: 2506932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2507098:-1
position: 2507098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2505534-2505686:-1:exon

position:2505534:-1
position: 2505534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2505686:-1
position: 2505686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2505065-2505181:-1:exon

position:2505065:-1
position: 2505065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2505181:-1
position: 2505181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2503508-2503711:-1:exon

position:2503508:-1
position: 2503508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2503711:-1
position: 2503711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2503200-2503384:-1:exon

position:2503200:-1
position: 2503200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2503384:-1
position: 2503384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2502464-2502611:-1:exon

position:2502464:-1
position: 2502464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2502611:-1
position: 2502611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2501507-2501644:-1:exon

position:2501507:-1
position: 2501507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501644:-1
position: 2501644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2500913-2501044:-1:exon

position:2500913:-1
position: 2500913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501044:-1
position: 2501044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2499873-2500003:-1:exon

position:2499873:-1
position: 2499873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2500003:-1
position: 2500003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2498857-2499067:-1:exon

position:2498857:-1
position: 2498857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2499067:-1
position: 2499067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2497310-2497453:-1:exon

position:2497310:-1
position: 2497310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2497453:-1
position: 2497453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2496858-2497056:-1:exon

position:2496858:-1
position: 2496858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2497056:-1
position: 2497056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2495232-2495437:-1:exon

position:2495232:-1
position: 2495232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2495437:-1
position: 2495437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2495087-2495148:-1:exon

position:2495087:-1
position: 2495087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2495148:-1
position: 2495148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2494338-2494546:-1:exon

position:2494338:-1
position: 2494338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2494546:-1
position: 2494546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2492602-2492874:-1:exon

position:2492602:-1
position: 2492602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2492874:-1
position: 2492874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2492124-2492272:-1:exon

position:2492124:-1
position: 2492124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2492272:-1
position: 2492272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2491540-2491623:-1:exon

position:2491540:-1
position: 2491540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2491623:-1
position: 2491623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:2488777-2488977:-1:exon

position:2488777:-1
position: 2488777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2488977:-1
position: 2488977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:2488101-2488232:-1:exon

position:2488101:-1
position: 2488101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2488232:-1
position: 2488232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:2487851-2487941:-1:exon

position:2487851:-1
position: 2487851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2487941:-1
position: 2487941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:2483999-2484180:-1:exon

position:2483999:-1
position: 2483999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2484180:-1
position: 2484180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:2482850-2482918:-1:exon

position:2482850:-1
position: 2482850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2482918:-1
position: 2482918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:2482672-2482766:-1:exon

position:2482672:-1
position: 2482672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2482766:-1
position: 2482766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:2481281-2481387:-1:exon

position:2481281:-1
position: 2481281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2481387:-1
position: 2481387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:2479815-2479910:-1:exon

position:2479815:-1
position: 2479815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2479910:-1
position: 2479910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:2479559-2479715:-1:exon

position:2479559:-1
position: 2479559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2479715:-1
position: 2479715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:2478046-2478164:-1:exon

position:2478046:-1
position: 2478046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2478164:-1
position: 2478164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:2476480-2476575:-1:exon

position:2476480:-1
position: 2476480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2476575:-1
position: 2476575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:2475859-2476046:-1:exon

position:2476046:-1
position: 2476046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoprotein TPR
translation: MAAVLQQVLERAELSKLPKAVQGKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEVEKRLSHSQERLVNESRACQGLRAELEKLHNQVKVLTEQNRELQSAQDRTSAVQNQLTRTKEELEAEKRDLVRTNERLSQELEYLTEDVKRLSEKLKESNTTKGELQLKLDELQASDVSVKYREKRLEQEKELLHSQNTWLNAELKTKTDELLALGREKGNEILELKCNLENKKEEVSRLEEQMNGLKTSNEHLQKHVEDLLTKSKEAKEQQASMEEKFHSELNAHIKLSNLYKSAADDSEAKSSELTRAVDELHKLLKEAGEANKAIQDHLLEVEQSKERMEKEMLEKIGKLEKELENANDLLSATKRKGAVLSEEELVAMSPTAAAVAKIVKPGMKLTELYNAYVEAQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEMQRLQEDADKARKRSSVLERDNQRLEVQAKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKISELQLQLESSLTELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGVVIPLQASSLEDISLVSTPKRPGTSQTASTPAPVPVIESTEAVEAKAALQQLQEIFENYKKEKADNEKVQNEQLEKLQEQVTDLRSQNTKVSTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLGNQVEKLEQEVSHLKKKLENEAEQKRTVTRALDVQLSDAKRQLDTEINLHANSKELLKNAQKEVAALKQHLSNVEVQLASQSSQRTGRGQPGEKEDVGDLVSQLRQAEEQVNDLRERLRTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDEKRRAVESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQARRDCQQQAKMAVEAQNKYERELMLHAADVEALHAAKQQVSQMAAVRQHLEQTAQKAESQLLECKASWEERERMLKDEVSKCVSRCEDLEKQNRLLHDQIENLSDKVVASMKEGVQGPLNFSLSEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQELQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVNQQKDPDTEEYRKLLSEKEVHMKRIQQLTEEVGRLKAEVARSNASLTNNQNLIQSLKEELNKVKTEKETIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEELKAQQDKAVETSAQSSGDHQEQQVSVQEMQELKEALSHAEAKAKSLESQVETLQKTLSEKETEARSVQEQTAQLQSELARLRQDLQERATQEEQLRQQITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREQQERHLEQRDEPQEPASKVPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVSTPSKVTAAAMAGSKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHAQIEPANQELSPSIVELVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEENTIEASEQVSEDTVEMPLPKKLKSVTPVGTEEEVVAEESTDGEAEPPAYNQDSQDSIGEGVTQGDYTPVEDSEETSQSLQMALGPLQSDQQTTASSQDGQGKGDDVIVIDSDDEEEEEDENDGEHEDYEEDEEDDDEDEDDTGMGDEGEDSNEGTGSADGNDG…
SIO_010081: TPR
subclass of: SO_0000673
so part of: TPR
location: complement(join(2475991..2476046,2476480..2476575,2478046..2478164,2479559..2479715,2479815..2479910,2481281..2481387,2482672..2482766,2482850..2482918,2483999..2484180,2487851..2487941,2488101..2488232,2488777..2488977,2491540..2491623,2492124..2492272,2492602..2492874,2494338..2494546,2495087..2495148,2495232..2495437,2496858..2497056,2497310..2497453,2498857..2499067,2499873..2500003,2500913..2501044,2501507..2501644,2502464..2502611,2503200..2503384,2503508..2503711,2505065..2505181,2505534..2505686,2506932..2507098,2508364..2508529,2509311..2509451,2510324..2510458,2511887..2512049,2512912..2513060,2513176..2513309,2513692..2513855,2514652..2514878,2515511..2515618,2517210..2517407,2518355..2518446,2518777..2518917,2519788..2519875,2519950..2520030,2520364..2520456,2520823..2520987,2521485..2521588,2522530..2522626,2525157..2525230,2525897..2526001,2526985..2527135))
location: region:2475991-2527135:-1
so has part: feature:2526985-2527135:-1:exon
so has part: feature:2525897-2526001:-1:exon
so has part: feature:2525157-2525230:-1:exon
so has part: feature:2522530-2522626:-1:exon
so has part: feature:2521485-2521588:-1:exon
so has part: feature:2520823-2520987:-1:exon
so has part: feature:2520364-2520456:-1:exon
so has part: feature:2519950-2520030:-1:exon
so has part: feature:2519788-2519875:-1:exon
so has part: feature:2518777-2518917:-1:exon
so has part: feature:2518355-2518446:-1:exon
so has part: feature:2517210-2517407:-1:exon
so has part: feature:2515511-2515618:-1:exon
so has part: feature:2514652-2514878:-1:exon
so has part: feature:2513692-2513855:-1:exon
so has part: feature:2513176-2513309:-1:exon
so has part: feature:2512912-2513060:-1:exon
so has part: feature:2511887-2512049:-1:exon
so has part: feature:2510324-2510458:-1:exon
so has part: feature:2509311-2509451:-1:exon
so has part: feature:2508364-2508529:-1:exon
so has part: feature:2506932-2507098:-1:exon
so has part: feature:2505534-2505686:-1:exon
so has part: feature:2505065-2505181:-1:exon
so has part: feature:2503508-2503711:-1:exon
so has part: feature:2503200-2503384:-1:exon
so has part: feature:2502464-2502611:-1:exon
so has part: feature:2501507-2501644:-1:exon
so has part: feature:2500913-2501044:-1:exon
so has part: feature:2499873-2500003:-1:exon
so has part: feature:2498857-2499067:-1:exon
so has part: feature:2497310-2497453:-1:exon
so has part: feature:2496858-2497056:-1:exon
so has part: feature:2495232-2495437:-1:exon
so has part: feature:2495087-2495148:-1:exon
so has part: feature:2494338-2494546:-1:exon
so has part: feature:2492602-2492874:-1:exon
so has part: feature:2492124-2492272:-1:exon
so has part: feature:2491540-2491623:-1:exon
so has part: feature:2488777-2488977:-1:exon
so has part: feature:2488101-2488232:-1:exon
so has part: feature:2487851-2487941:-1:exon
so has part: feature:2483999-2484180:-1:exon
so has part: feature:2482850-2482918:-1:exon
so has part: feature:2482672-2482766:-1:exon
so has part: feature:2481281-2481387:-1:exon
so has part: feature:2479815-2479910:-1:exon
so has part: feature:2479559-2479715:-1:exon
so has part: feature:2478046-2478164:-1:exon
so has part: feature:2476480-2476575:-1:exon
so has part: feature:2475991-2476046:-1:exon

XP_004578879.1
type: Protein
SIO_000068: ncbiprotein

position:2475991:-1
position: 2475991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2526985-2527135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2525897-2526001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2525157-2525230:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2522530-2522626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2521485-2521588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2520823-2520987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2520364-2520456:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2519950-2520030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2519788-2519875:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2518777-2518917:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2518355-2518446:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2517210-2517407:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2515511-2515618:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2514652-2514878:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2513692-2513855:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2513176-2513309:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2512912-2513060:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2511887-2512049:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2510324-2510458:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2509311-2509451:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2508364-2508529:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2506932-2507098:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2505534-2505686:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2505065-2505181:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2503508-2503711:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2503200-2503384:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2502464-2502611:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2501507-2501644:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2500913-2501044:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2499873-2500003:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2498857-2499067:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2497310-2497453:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2496858-2497056:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2495232-2495437:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2495087-2495148:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2494338-2494546:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2492602-2492874:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2492124-2492272:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2491540-2491623:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2488777-2488977:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2488101-2488232:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2487851-2487941:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2483999-2484180:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2482850-2482918:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2482672-2482766:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2481281-2481387:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2479815-2479910:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2479559-2479715:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2478046-2478164:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2476480-2476575:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2475991-2476046:-1:exon

ODR4
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ODR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2529758..2559905
location: region:2529758-2559905:1
so has part: feature:2529758-2559905:1:exon
subclass of: SO_0000010

101516240
type: Gene
SIO_000068: ncbigene

position:2529758:1
position: 2529758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2559905:1
position: 2559905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2529758-2559905:1:exon

ODR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ODR4
product: odr-4 GPCR localization factor homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578817.3
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: join(2529758..2529856,2532233..2532358,2535308..2535403,2536487..2536593,2537481..2537517,2538867..2539007,2539902..2539997,2540709..2540777,2543401..2543529,2544004..2544100,2546303..2546488,2557830..2557940,2559593..2559905)
location: region:2529758-2559905:1
so has part: feature:2529758-2529856:1:exon
so has part: feature:2532233-2532358:1:exon
so has part: feature:2535308-2535403:1:exon
so has part: feature:2536487-2536593:1:exon
so has part: feature:2537481-2537517:1:exon
so has part: feature:2538867-2539007:1:exon
so has part: feature:2539902-2539997:1:exon
so has part: feature:2540709-2540777:1:exon
so has part: feature:2543401-2543529:1:exon
so has part: feature:2544004-2544100:1:exon
so has part: feature:2546303-2546488:1:exon
so has part: feature:2557830-2557940:1:exon
so has part: feature:2559593-2559905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2529758-2529856:1:exon

position:2529856:1
position: 2529856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2532233-2532358:1:exon

position:2532233:1
position: 2532233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2532358:1
position: 2532358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2535308-2535403:1:exon

position:2535308:1
position: 2535308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2535403:1
position: 2535403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2536487-2536593:1:exon

position:2536487:1
position: 2536487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2536593:1
position: 2536593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2537481-2537517:1:exon

position:2537481:1
position: 2537481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2537517:1
position: 2537517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2538867-2539007:1:exon

position:2538867:1
position: 2538867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2539007:1
position: 2539007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2539902-2539997:1:exon

position:2539902:1
position: 2539902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2539997:1
position: 2539997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2540709-2540777:1:exon

position:2540709:1
position: 2540709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2540777:1
position: 2540777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2543401-2543529:1:exon

position:2543401:1
position: 2543401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2543529:1
position: 2543529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2544004-2544100:1:exon

position:2544004:1
position: 2544004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2544100:1
position: 2544100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2546303-2546488:1:exon

position:2546303:1
position: 2546303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2546488:1
position: 2546488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2557830-2557940:1:exon

position:2557830:1
position: 2557830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2557940:1
position: 2557940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2559593-2559905:1:exon

position:2559593:1
position: 2559593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ODR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ODR4
product: odr-4 GPCR localization factor homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578818.3
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: join(2529758..2529856,2532233..2532358,2535308..2535403,2536487..2536593,2537481..2537517,2538867..2539007,2539902..2539997,2540709..2540777,2543401..2543529,2544004..2544100,2546315..2546488,2557830..2557940,2559593..2559905)
location: region:2529758-2559905:1
so has part: feature:2529758-2529856:1:exon
so has part: feature:2532233-2532358:1:exon
so has part: feature:2535308-2535403:1:exon
so has part: feature:2536487-2536593:1:exon
so has part: feature:2537481-2537517:1:exon
so has part: feature:2538867-2539007:1:exon
so has part: feature:2539902-2539997:1:exon
so has part: feature:2540709-2540777:1:exon
so has part: feature:2543401-2543529:1:exon
so has part: feature:2544004-2544100:1:exon
so has part: feature:2546315-2546488:1:exon
so has part: feature:2557830-2557940:1:exon
so has part: feature:2559593-2559905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2529758-2529856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2532233-2532358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2535308-2535403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2536487-2536593:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2537481-2537517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2538867-2539007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2539902-2539997:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2540709-2540777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2543401-2543529:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2544004-2544100:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2546315-2546488:1:exon

position:2546315:1
position: 2546315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2557830-2557940:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2559593-2559905:1:exon

ODR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ODR4
product: odr-4 GPCR localization factor homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578819.3
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: join(2529758..2529856,2532233..2532358,2535308..2535403,2536487..2536593,2537481..2537517,2538867..2539007,2539902..2539997,2543401..2543529,2544004..2544100,2546303..2546488,2557830..2557940,2559593..2559905)
location: region:2529758-2559905:1
so has part: feature:2529758-2529856:1:exon
so has part: feature:2532233-2532358:1:exon
so has part: feature:2535308-2535403:1:exon
so has part: feature:2536487-2536593:1:exon
so has part: feature:2537481-2537517:1:exon
so has part: feature:2538867-2539007:1:exon
so has part: feature:2539902-2539997:1:exon
so has part: feature:2543401-2543529:1:exon
so has part: feature:2544004-2544100:1:exon
so has part: feature:2546303-2546488:1:exon
so has part: feature:2557830-2557940:1:exon
so has part: feature:2559593-2559905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2529758-2529856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2532233-2532358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2535308-2535403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2536487-2536593:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2537481-2537517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2538867-2539007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2539902-2539997:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2543401-2543529:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2544004-2544100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2546303-2546488:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2557830-2557940:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2559593-2559905:1:exon

ODR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ODR4
product: odr-4 GPCR localization factor homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578821.3
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: join(2529758..2529856,2532233..2532358,2535308..2535403,2536487..2536593,2537481..2537517,2538867..2539007,2540709..2540777,2543401..2543529,2544004..2544100,2546315..2546488,2557830..2557940,2559593..2559905)
location: region:2529758-2559905:1
so has part: feature:2529758-2529856:1:exon
so has part: feature:2532233-2532358:1:exon
so has part: feature:2535308-2535403:1:exon
so has part: feature:2536487-2536593:1:exon
so has part: feature:2537481-2537517:1:exon
so has part: feature:2538867-2539007:1:exon
so has part: feature:2540709-2540777:1:exon
so has part: feature:2543401-2543529:1:exon
so has part: feature:2544004-2544100:1:exon
so has part: feature:2546315-2546488:1:exon
so has part: feature:2557830-2557940:1:exon
so has part: feature:2559593-2559905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2529758-2529856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2532233-2532358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2535308-2535403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2536487-2536593:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2537481-2537517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2538867-2539007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2540709-2540777:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2543401-2543529:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2544004-2544100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2546315-2546488:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2557830-2557940:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2559593-2559905:1:exon

ODR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ODR4
product: odr-4 GPCR localization factor homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578820.3
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: join(2529758..2529856,2532233..2532358,2536487..2536593,2537481..2537517,2538867..2539007,2539902..2539997,2540709..2540777,2543401..2543529,2544004..2544100,2546303..2546488,2557830..2557940,2559593..2559905)
location: region:2529758-2559905:1
so has part: feature:2529758-2529856:1:exon
so has part: feature:2532233-2532358:1:exon
so has part: feature:2536487-2536593:1:exon
so has part: feature:2537481-2537517:1:exon
so has part: feature:2538867-2539007:1:exon
so has part: feature:2539902-2539997:1:exon
so has part: feature:2540709-2540777:1:exon
so has part: feature:2543401-2543529:1:exon
so has part: feature:2544004-2544100:1:exon
so has part: feature:2546303-2546488:1:exon
so has part: feature:2557830-2557940:1:exon
so has part: feature:2559593-2559905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2529758-2529856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2532233-2532358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2536487-2536593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2537481-2537517:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2538867-2539007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2539902-2539997:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2540709-2540777:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2543401-2543529:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2544004-2544100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2546303-2546488:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2557830-2557940:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2559593-2559905:1:exon

ODR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ODR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein odr-4 homolog isoform X1
translation: MGRTYIVEETVGQYLSNISLQGKAFVSGLLVGQCSPQKDYVILAARTPPKEEQQENLEHPKAQLDEEWAAEHANQVSRMLPGGLLVLGVFIITTAELTNDFQHTLRRLLFAVEKSVSRKRLWRFTEEEVSERVALHLCCASKKLVCRTYDVHDPKSSARPADWKYQNGLSTSWLCLDGTVHINIHIPLSTTSASYSLEKNTRNGLTRWAKQIENGVYLINGQVKGEDCDLLEGQKKSPRGNAPGSGHSFDVRVLTQLLLSPDRRSTATVQICSGSVNLKGAVRCRAFLHSSRPKVKDAVQAVKRDILNTVVDRCEILFEDLLLNEIPGKKVMSSEKEFHILPHRVFVPIPGCAVMLCDYKFGDEPAEEIRDHFMEMLDHTIKAEDLEIAEEPNTACVSPSVDSEGSVDSTDEERPPQPVKSTVMMKVQQNTGVIAAFAVAVFAVGVSFHYFSD
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: join(2529758..2529856,2532233..2532358,2535308..2535403,2536487..2536593,2537481..2537517,2538867..2539007,2539902..2539997,2540709..2540777,2543401..2543529,2544004..2544100,2546303..2546488,2557830..2557940,2559593..2559660)
location: region:2529758-2559660:1
so has part: feature:2529758-2529856:1:exon
so has part: feature:2532233-2532358:1:exon
so has part: feature:2535308-2535403:1:exon
so has part: feature:2536487-2536593:1:exon
so has part: feature:2537481-2537517:1:exon
so has part: feature:2538867-2539007:1:exon
so has part: feature:2539902-2539997:1:exon
so has part: feature:2540709-2540777:1:exon
so has part: feature:2543401-2543529:1:exon
so has part: feature:2544004-2544100:1:exon
so has part: feature:2546303-2546488:1:exon
so has part: feature:2557830-2557940:1:exon
so has part: feature:2559593-2559660:1:exon

XP_004578874.1
type: Protein
SIO_000068: ncbiprotein

position:2559660:1
position: 2559660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2529758-2529856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2532233-2532358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2535308-2535403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2536487-2536593:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2537481-2537517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2538867-2539007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2539902-2539997:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2540709-2540777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2543401-2543529:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2544004-2544100:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2546303-2546488:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2557830-2557940:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2559593-2559660:1:exon

ODR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ODR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein odr-4 homolog isoform X2
translation: MGRTYIVEETVGQYLSNISLQGKAFVSGLLVGQCSPQKDYVILAARTPPKEEQQENLEHPKAQLDEEWAAEHANQVSRMLPGGLLVLGVFIITTAELTNDFQHTLRRLLFAVEKSVSRKRLWRFTEEEVSERVALHLCCASKKLVCRTYDVHDPKSSARPADWKYQNGLSTSWLCLDGTVHINIHIPLSTTSASYSLEKNTRNGLTRWAKQIENGVYLINGQVKGEDCDLLEGQKKSPRGNAPGSGHSFDVRVLTQLLLSPDRRSTATVQICSGSVNLKGAVRCRAFLHSSRPKVKDAVQAVKRDILNTVVDRCEILFEDLLLNEIPGKKVMKFHILPHRVFVPIPGCAVMLCDYKFGDEPAEEIRDHFMEMLDHTIKAEDLEIAEEPNTACVSPSVDSEGSVDSTDEERPPQPVKSTVMMKVQQNTGVIAAFAVAVFAVGVSFHYFSD
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: join(2529758..2529856,2532233..2532358,2535308..2535403,2536487..2536593,2537481..2537517,2538867..2539007,2539902..2539997,2540709..2540777,2543401..2543529,2544004..2544100,2546315..2546488,2557830..2557940,2559593..2559660)
location: region:2529758-2559660:1
so has part: feature:2529758-2529856:1:exon
so has part: feature:2532233-2532358:1:exon
so has part: feature:2535308-2535403:1:exon
so has part: feature:2536487-2536593:1:exon
so has part: feature:2537481-2537517:1:exon
so has part: feature:2538867-2539007:1:exon
so has part: feature:2539902-2539997:1:exon
so has part: feature:2540709-2540777:1:exon
so has part: feature:2543401-2543529:1:exon
so has part: feature:2544004-2544100:1:exon
so has part: feature:2546315-2546488:1:exon
so has part: feature:2557830-2557940:1:exon
so has part: feature:2559593-2559660:1:exon

XP_004578875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2529758-2529856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2532233-2532358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2535308-2535403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2536487-2536593:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2537481-2537517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2538867-2539007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2539902-2539997:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2540709-2540777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2543401-2543529:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2544004-2544100:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2546315-2546488:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2557830-2557940:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2559593-2559660:1:exon

ODR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ODR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein odr-4 homolog isoform X3
translation: MGRTYIVEETVGQYLSNISLQGKAFVSGLLVGQCSPQKDYVILAARTPPKEEQQENLEHPKAQLDEEWAAEHANQVSRMLPGGLLVLGVFIITTAELTNDFQHTLRRLLFAVEKSVSRKRLWRFTEEEVSERVALHLCCASKKLVCRTYDVHDPKSSARPADWKYQNGLSTSWLCLDGTVHINIHIPLSTTSASYSLEKNTRNGLTRWAKQIENGVYLINGQVKGEDCDLLEGQLLSPDRRSTATVQICSGSVNLKGAVRCRAFLHSSRPKVKDAVQAVKRDILNTVVDRCEILFEDLLLNEIPGKKVMSSEKEFHILPHRVFVPIPGCAVMLCDYKFGDEPAEEIRDHFMEMLDHTIKAEDLEIAEEPNTACVSPSVDSEGSVDSTDEERPPQPVKSTVMMKVQQNTGVIAAFAVAVFAVGVSFHYFSD
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: join(2529758..2529856,2532233..2532358,2535308..2535403,2536487..2536593,2537481..2537517,2538867..2539007,2539902..2539997,2543401..2543529,2544004..2544100,2546303..2546488,2557830..2557940,2559593..2559660)
location: region:2529758-2559660:1
so has part: feature:2529758-2529856:1:exon
so has part: feature:2532233-2532358:1:exon
so has part: feature:2535308-2535403:1:exon
so has part: feature:2536487-2536593:1:exon
so has part: feature:2537481-2537517:1:exon
so has part: feature:2538867-2539007:1:exon
so has part: feature:2539902-2539997:1:exon
so has part: feature:2543401-2543529:1:exon
so has part: feature:2544004-2544100:1:exon
so has part: feature:2546303-2546488:1:exon
so has part: feature:2557830-2557940:1:exon
so has part: feature:2559593-2559660:1:exon

XP_004578876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2529758-2529856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2532233-2532358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2535308-2535403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2536487-2536593:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2537481-2537517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2538867-2539007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2539902-2539997:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2543401-2543529:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2544004-2544100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2546303-2546488:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2557830-2557940:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2559593-2559660:1:exon

ODR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ODR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein odr-4 homolog isoform X5
translation: MGRTYIVEETVGQYLSNISLQGKAFVSGLLVGQCSPQKDYVILAARTPPKEEQQENLEHPKAQLDEEWAAEHANQVSRMLPGGLLVLGVFIITTAELTNDFQHTLRRLLFAVEKSVSRKRLWRFTEEEVSERVALHLCCASKKLVCRTYDVHDPKSSARPADWKYQNGLSTSWLCLDGTVHINIHIPLSTTSASYSLEKNTRKKSPRGNAPGSGHSFDVRVLTQLLLSPDRRSTATVQICSGSVNLKGAVRCRAFLHSSRPKVKDAVQAVKRDILNTVVDRCEILFEDLLLNEIPGKKVMKFHILPHRVFVPIPGCAVMLCDYKFGDEPAEEIRDHFMEMLDHTIKAEDLEIAEEPNTACVSPSVDSEGSVDSTDEERPPQPVKSTVMMKVQQNTGVIAAFAVAVFAVGVSFHYFSD
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: join(2529758..2529856,2532233..2532358,2535308..2535403,2536487..2536593,2537481..2537517,2538867..2539007,2540709..2540777,2543401..2543529,2544004..2544100,2546315..2546488,2557830..2557940,2559593..2559660)
location: region:2529758-2559660:1
so has part: feature:2529758-2529856:1:exon
so has part: feature:2532233-2532358:1:exon
so has part: feature:2535308-2535403:1:exon
so has part: feature:2536487-2536593:1:exon
so has part: feature:2537481-2537517:1:exon
so has part: feature:2538867-2539007:1:exon
so has part: feature:2540709-2540777:1:exon
so has part: feature:2543401-2543529:1:exon
so has part: feature:2544004-2544100:1:exon
so has part: feature:2546315-2546488:1:exon
so has part: feature:2557830-2557940:1:exon
so has part: feature:2559593-2559660:1:exon

XP_004578878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2529758-2529856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2532233-2532358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2535308-2535403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2536487-2536593:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2537481-2537517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2538867-2539007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2540709-2540777:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2543401-2543529:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2544004-2544100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2546315-2546488:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2557830-2557940:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2559593-2559660:1:exon

ODR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ODR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein odr-4 homolog isoform X4
translation: MGRTYIVEETVGQYLSNISLQGKAFVSGLLVGQCSPQKDYVILAARTPPKEEQQENLEHPKAQLDEEWAAEHANQLLFAVEKSVSRKRLWRFTEEEVSERVALHLCCASKKLVCRTYDVHDPKSSARPADWKYQNGLSTSWLCLDGTVHINIHIPLSTTSASYSLEKNTRNGLTRWAKQIENGVYLINGQVKGEDCDLLEGQKKSPRGNAPGSGHSFDVRVLTQLLLSPDRRSTATVQICSGSVNLKGAVRCRAFLHSSRPKVKDAVQAVKRDILNTVVDRCEILFEDLLLNEIPGKKVMSSEKEFHILPHRVFVPIPGCAVMLCDYKFGDEPAEEIRDHFMEMLDHTIKAEDLEIAEEPNTACVSPSVDSEGSVDSTDEERPPQPVKSTVMMKVQQNTGVIAAFAVAVFAVGVSFHYFSD
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: join(2529758..2529856,2532233..2532358,2536487..2536593,2537481..2537517,2538867..2539007,2539902..2539997,2540709..2540777,2543401..2543529,2544004..2544100,2546303..2546488,2557830..2557940,2559593..2559660)
location: region:2529758-2559660:1
so has part: feature:2529758-2529856:1:exon
so has part: feature:2532233-2532358:1:exon
so has part: feature:2536487-2536593:1:exon
so has part: feature:2537481-2537517:1:exon
so has part: feature:2538867-2539007:1:exon
so has part: feature:2539902-2539997:1:exon
so has part: feature:2540709-2540777:1:exon
so has part: feature:2543401-2543529:1:exon
so has part: feature:2544004-2544100:1:exon
so has part: feature:2546303-2546488:1:exon
so has part: feature:2557830-2557940:1:exon
so has part: feature:2559593-2559660:1:exon

XP_004578877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2529758-2529856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2532233-2532358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2536487-2536593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2537481-2537517:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2538867-2539007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2539902-2539997:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2540709-2540777:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2543401-2543529:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2544004-2544100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2546303-2546488:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2557830-2557940:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2559593-2559660:1:exon

PDC
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2587914..2592704)
location: region:2587914-2592704:-1
so has part: feature:2587914-2592704:-1:exon
subclass of: SO_0000010

101515996
type: Gene
SIO_000068: ncbigene

position:2587914:-1
position: 2587914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2592704:-1
position: 2592704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2587914-2592704:-1:exon

PDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PDC
product: phosducin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_004578816.3
SIO_010081: PDC
subclass of: SO_0000673
so part of: PDC
location: complement(join(2587914..2588438,2591214..2591362,2592632..2592704))
location: region:2587914-2592704:-1
so has part: feature:2592632-2592704:-1:exon
so has part: feature:2591214-2591362:-1:exon
so has part: feature:2587914-2588438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2592632-2592704:-1:exon

position:2592632:-1
position: 2592632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2591214-2591362:-1:exon

position:2591214:-1
position: 2591214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2591362:-1
position: 2591362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2587914-2588438:-1:exon

position:2588438:-1
position: 2588438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosducin
translation: MEESKSQSLEEDFEGQATHTGPKGVINDWRKFKLESEDSDSIPPSKKEFLRRMSSHSKDDKDAKDRLGRKMSTQEYELIHQEKEDENCLRKYRRQCMQDMHQKLSFGPRYGFVYELQTGEQFLETIEKEQKITTIVVHIYEEGIKGCDALNSSLTCLASEYPMVKFCKIKASNTGAGDRFSSDVLPTLLVYKGGELISNFINIGEQFAEEFFAGDVESFLIGYGLLPEREIQALEQTHPDEDME
SIO_010081: PDC
subclass of: SO_0000673
so part of: PDC
location: complement(join(2587914..2588438,2591214..2591362,2592632..2592692))
location: region:2587914-2592692:-1
so has part: feature:2592632-2592692:-1:exon
so has part: feature:2591214-2591362:-1:exon
so has part: feature:2587914-2588438:-1:exon

XP_004578873.1
type: Protein
SIO_000068: ncbiprotein

position:2592692:-1
position: 2592692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2592632-2592692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2591214-2591362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2587914-2588438:-1:exon

LOC118759117
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118759117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2656926..2657487
location: region:2656926-2657487:1
so has part: feature:2656926-2657487:1:exon

118759117
type: Gene
SIO_000068: ncbigene

position:2656926:1
position: 2656926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2657487:1
position: 2657487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2656926-2657487:1:exon

LOC118759117
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118759117
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC118759117
subclass of: SO_0000673
so part of: LOC118759117
location: 2656926..2657487
location: region:2656926-2657487:1
so has part: feature:2656926-2657487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2656926-2657487:1:exon

PTGS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PTGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2752363..2757373)
location: region:2752363-2757373:-1
so has part: feature:2752363-2757373:-1:exon
subclass of: SO_0000010

101536557
type: Gene
SIO_000068: ncbigene

position:2752363:-1
position: 2752363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2757373:-1
position: 2757373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2752363-2757373:-1:exon

PTGS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PTGS2
product: prostaglandin-endoperoxide synthase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
transcript id: XM_004578815.1
SIO_010081: PTGS2
subclass of: SO_0000673
so part of: PTGS2
location: complement(join(2752363..2752772,2752900..2753047,2753529..2753815,2754107..2754353,2754451..2754534,2755107..2755288,2755591..2755734,2756358..2756501,2756596..2756712,2757322..2757373))
location: region:2752363-2757373:-1
so has part: feature:2757322-2757373:-1:exon
so has part: feature:2756596-2756712:-1:exon
so has part: feature:2756358-2756501:-1:exon
so has part: feature:2755591-2755734:-1:exon
so has part: feature:2755107-2755288:-1:exon
so has part: feature:2754451-2754534:-1:exon
so has part: feature:2754107-2754353:-1:exon
so has part: feature:2753529-2753815:-1:exon
so has part: feature:2752900-2753047:-1:exon
so has part: feature:2752363-2752772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2757322-2757373:-1:exon

position:2757322:-1
position: 2757322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2756596-2756712:-1:exon

position:2756596:-1
position: 2756596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2756712:-1
position: 2756712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2756358-2756501:-1:exon

position:2756358:-1
position: 2756358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2756501:-1
position: 2756501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2755591-2755734:-1:exon

position:2755591:-1
position: 2755591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2755734:-1
position: 2755734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2755107-2755288:-1:exon

position:2755107:-1
position: 2755107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2755288:-1
position: 2755288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2754451-2754534:-1:exon

position:2754451:-1
position: 2754451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2754534:-1
position: 2754534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2754107-2754353:-1:exon

position:2754107:-1
position: 2754107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2754353:-1
position: 2754353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2753529-2753815:-1:exon

position:2753529:-1
position: 2753529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2753815:-1
position: 2753815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2752900-2753047:-1:exon

position:2752900:-1
position: 2752900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2753047:-1
position: 2753047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2752363-2752772:-1:exon

position:2752772:-1
position: 2752772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PTGS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PTGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin G/H synthase 2
translation: MLTRILLLFAAVALSHAANPCCSNPCQNQGVCMTMGFDQYKCDCTRTGFYGENCSTPEILTRIKLLLKPTPNTVHYILTHFKAVWNIVNNIPFLRNSIMRYVLTSRSHLIDSPPTYNVHYGYKNWEAFSNLSYYTRALPPVADDCPTPVGVKGKKELPDSKELVEKVLLRRKFIPDPQGTNMMFAFFAQHFTHQFFKTDQKRGPAFTRGLGHGVDLSHIYGETLDRQHKLRLFKDGKMKYQVIDGEVYPPTVRDTQAEMFYPPHVPEQLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWDDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFSQQFQYQNRIASEFNTLYHWHPLLPDAFHIDDQKYNYQQFLYNNSILLEHGLTQFVQSFTKQIAGRVAGGRNIPPAVQKVAKASIDQSRQMKYQSFNEYRKRFYLKPYESFEELTGEKEMAAELEALYGDIDAVELYPALLVERPRPDAIFGETMVEMGAPFSLKGLMGNPICSPNYWKPSTFGGEVGFKIVNTASIQSLICNNVKGCPFTSFNVPDPQLTKAVTINASSSHSRLEDINPTVLLKERSTEL
SIO_010081: PTGS2
subclass of: SO_0000673
so part of: PTGS2
location: complement(join(2752363..2752772,2752900..2753047,2753529..2753815,2754107..2754353,2754451..2754534,2755107..2755288,2755591..2755734,2756358..2756501,2756596..2756712,2757322..2757373))
location: region:2752363-2757373:-1
so has part: feature:2757322-2757373:-1:exon
so has part: feature:2756596-2756712:-1:exon
so has part: feature:2756358-2756501:-1:exon
so has part: feature:2755591-2755734:-1:exon
so has part: feature:2755107-2755288:-1:exon
so has part: feature:2754451-2754534:-1:exon
so has part: feature:2754107-2754353:-1:exon
so has part: feature:2753529-2753815:-1:exon
so has part: feature:2752900-2753047:-1:exon
so has part: feature:2752363-2752772:-1:exon

XP_004578872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2757322-2757373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2756596-2756712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2756358-2756501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2755591-2755734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2755107-2755288:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2754451-2754534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2754107-2754353:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2753529-2753815:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2752900-2753047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2752363-2752772:-1:exon

LOC118759118
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118759118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2830417..2830936
location: region:2830417-2830936:1
so has part: feature:2830417-2830936:1:exon

118759118
type: Gene
SIO_000068: ncbigene

position:2830417:1
position: 2830417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2830936:1
position: 2830936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2830417-2830936:1:exon

LOC118759118
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118759118
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC118759118
subclass of: SO_0000673
so part of: LOC118759118
location: 2830417..2830936
location: region:2830417-2830936:1
so has part: feature:2830417-2830936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2830417-2830936:1:exon

PLA2G4A
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PLA2G4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2894466..2977954
location: region:2894466-2977954:1
so has part: feature:2894466-2977954:1:exon
subclass of: SO_0000010

101520966
type: Gene
SIO_000068: ncbigene

position:2894466:1
position: 2894466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2977954:1
position: 2977954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2894466-2977954:1:exon

PLA2G4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PLA2G4A
product: phospholipase A2 group IVA
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578970.1
SIO_010081: PLA2G4A
subclass of: SO_0000673
so part of: PLA2G4A
location: join(2894466..2894570,2904465..2904546,2915097..2915245,2915883..2915996,2924648..2924685,2931036..2931177,2935770..2935906,2941863..2942085,2942805..2942919,2949357..2949494,2949576..2949668,2952008..2952079,2955687..2955926,2961265..2961449,2967482..2967677,2968937..2969094,2977823..2977954)
location: region:2894466-2977954:1
so has part: feature:2894466-2894570:1:exon
so has part: feature:2904465-2904546:1:exon
so has part: feature:2915097-2915245:1:exon
so has part: feature:2915883-2915996:1:exon
so has part: feature:2924648-2924685:1:exon
so has part: feature:2931036-2931177:1:exon
so has part: feature:2935770-2935906:1:exon
so has part: feature:2941863-2942085:1:exon
so has part: feature:2942805-2942919:1:exon
so has part: feature:2949357-2949494:1:exon
so has part: feature:2949576-2949668:1:exon
so has part: feature:2952008-2952079:1:exon
so has part: feature:2955687-2955926:1:exon
so has part: feature:2961265-2961449:1:exon
so has part: feature:2967482-2967677:1:exon
so has part: feature:2968937-2969094:1:exon
so has part: feature:2977823-2977954:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2894466-2894570:1:exon

position:2894570:1
position: 2894570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2904465-2904546:1:exon

position:2904465:1
position: 2904465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904546:1
position: 2904546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2915097-2915245:1:exon

position:2915097:1
position: 2915097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2915245:1
position: 2915245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2915883-2915996:1:exon

position:2915883:1
position: 2915883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2915996:1
position: 2915996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2924648-2924685:1:exon

position:2924648:1
position: 2924648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2924685:1
position: 2924685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2931036-2931177:1:exon

position:2931036:1
position: 2931036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2931177:1
position: 2931177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2935770-2935906:1:exon

position:2935770:1
position: 2935770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2935906:1
position: 2935906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2941863-2942085:1:exon

position:2941863:1
position: 2941863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2942085:1
position: 2942085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2942805-2942919:1:exon

position:2942805:1
position: 2942805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2942919:1
position: 2942919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2949357-2949494:1:exon

position:2949357:1
position: 2949357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2949494:1
position: 2949494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2949576-2949668:1:exon

position:2949576:1
position: 2949576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2949668:1
position: 2949668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2952008-2952079:1:exon

position:2952008:1
position: 2952008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2952079:1
position: 2952079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2955687-2955926:1:exon

position:2955687:1
position: 2955687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2955926:1
position: 2955926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2961265-2961449:1:exon

position:2961265:1
position: 2961265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2961449:1
position: 2961449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2967482-2967677:1:exon

position:2967482:1
position: 2967482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2967677:1
position: 2967677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2968937-2969094:1:exon

position:2968937:1
position: 2968937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2969094:1
position: 2969094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2977823-2977954:1:exon

position:2977823:1
position: 2977823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLA2G4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PLA2G4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic phospholipase A2
translation: MSFIDPYQHIIVEHQYSHKFTVVVLRATRVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYVMDETLGTAKFPVSSMKVGEEKEVPFIFNQVTEMILQMSLEVCSSPDLRFSMALCDQEKAFRQLRKGHVKENMKKLLGPKKSEGLCSTRDVPVVAILGSGGGFRAMVGFSGVMKALYESGILDCATYIAGLSGSTWYMSTLYSHPDFPEKGPEEINEELMQNVSHNPLLLLTPQKVKRYVESLWKKKSSGQPVTFTDIFGMLIGETLIHNRMSTTLSSLKEKVSAAQCPLPLFTCLHVKPDVSELMFADWVEFSPYEIGMAKYGTFMAPDLFGSKFFMGKVVKKYDENPLHFLMGVWGSAFSILFNRVLGVSGSQSRGATMEEELENITAKHIVSNDSSDSDDESQEPKGTESEEAEREYQDDHQASWVHRMLMALVSDSTLFNTREGRAGKVHNFMLGLNLNSSYPLSPLRDFRQESFDEDELDMAVADPDEFERIYEPLDVKSKKIHVVDSGLTFNLPYPLILRPQRGVDLIISFDFSARPSDTSPPFKELLLAEKWAKMNKLPFPKIDPYVFDREGLKECYVFKPKNTDVENDCPIIIHFVLANINFRKYKSPGVPRETKEEKEIADFDIFDDPESPFSTFNFQYPNQAFKRLHDLMYFNTLNNIEVIKDALVESIAYRRQNPSRCSVSLSDVEARKFFNKEFLGKPAP
SIO_010081: PLA2G4A
subclass of: SO_0000673
so part of: PLA2G4A
location: join(2894538..2894570,2904465..2904546,2915097..2915245,2915883..2915996,2924648..2924685,2931036..2931177,2935770..2935906,2941863..2942085,2942805..2942919,2949357..2949494,2949576..2949668,2952008..2952079,2955687..2955926,2961265..2961449,2967482..2967677,2968937..2969094,2977823..2977954)
location: region:2894538-2977954:1
so has part: feature:2894538-2894570:1:exon
so has part: feature:2904465-2904546:1:exon
so has part: feature:2915097-2915245:1:exon
so has part: feature:2915883-2915996:1:exon
so has part: feature:2924648-2924685:1:exon
so has part: feature:2931036-2931177:1:exon
so has part: feature:2935770-2935906:1:exon
so has part: feature:2941863-2942085:1:exon
so has part: feature:2942805-2942919:1:exon
so has part: feature:2949357-2949494:1:exon
so has part: feature:2949576-2949668:1:exon
so has part: feature:2952008-2952079:1:exon
so has part: feature:2955687-2955926:1:exon
so has part: feature:2961265-2961449:1:exon
so has part: feature:2967482-2967677:1:exon
so has part: feature:2968937-2969094:1:exon
so has part: feature:2977823-2977954:1:exon

XP_004579027.1
type: Protein
SIO_000068: ncbiprotein

position:2894538:1
position: 2894538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2894538-2894570:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2904465-2904546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2915097-2915245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2915883-2915996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2924648-2924685:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2931036-2931177:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2935770-2935906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2941863-2942085:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2942805-2942919:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2949357-2949494:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2949576-2949668:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2952008-2952079:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2955687-2955926:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2961265-2961449:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2967482-2967677:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2968937-2969094:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2977823-2977954:1:exon

LOC118759149
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118759149
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4268124..4268230)
location: region:4268124-4268230:-1
so has part: feature:4268124-4268230:-1:exon
subclass of: SO_0000623

118759149
type: Gene
SIO_000068: ncbigene

position:4268124:-1
position: 4268124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4268230:-1
position: 4268230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4268124-4268230:-1:exon

LOC118759149
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118759149
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996003.1
SIO_010081: LOC118759149
subclass of: SO_0000673
so part of: LOC118759149
location: complement(4268124..4268230)
location: region:4268124-4268230:-1
so has part: feature:4268124-4268230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4268124-4268230:-1:exon

LOC118759152
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118759152
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4780534..4780638
location: region:4780534-4780638:1
so has part: feature:4780534-4780638:1:exon
subclass of: SO_0000623

118759152
type: Gene
SIO_000068: ncbigene

position:4780534:1
position: 4780534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4780638:1
position: 4780638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4780534-4780638:1:exon

LOC118759152
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118759152
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996006.1
SIO_010081: LOC118759152
subclass of: SO_0000673
so part of: LOC118759152
location: 4780534..4780638
location: region:4780534-4780638:1
so has part: feature:4780534-4780638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4780534-4780638:1:exon

BRINP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: BRINP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4809090..5211224)
location: region:4809090-5211224:-1
so has part: feature:4809090-5211224:-1:exon
subclass of: SO_0000010

101535984
type: Gene
SIO_000068: ncbigene

position:4809090:-1
position: 4809090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5211224:-1
position: 5211224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4809090-5211224:-1:exon

BRINP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: BRINP3
product: BMP/retinoic acid inducible neural specific 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 Proteins
transcript id: XM_004578814.2
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: complement(join(4809090..4810563,4880818..4881040,4942699..4942935,4954308..4954413,4998950..4999140,5192352..5192650))
location: region:4809090-5192650:-1
so has part: feature:5192352-5192650:-1:exon
so has part: feature:4998950-4999140:-1:exon
so has part: feature:4954308-4954413:-1:exon
so has part: feature:4942699-4942935:-1:exon
so has part: feature:4880818-4881040:-1:exon
so has part: feature:4809090-4810563:-1:exon

position:5192650:-1
position: 5192650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5192352-5192650:-1:exon

position:5192352:-1
position: 5192352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4998950-4999140:-1:exon

position:4998950:-1
position: 4998950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4999140:-1
position: 4999140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4954308-4954413:-1:exon

position:4954308:-1
position: 4954308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4954413:-1
position: 4954413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4942699-4942935:-1:exon

position:4942699:-1
position: 4942699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4942935:-1
position: 4942935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4880818-4881040:-1:exon

position:4880818:-1
position: 4880818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4881040:-1
position: 4881040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4809090-4810563:-1:exon

position:4810563:-1
position: 4810563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BRINP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: BRINP3
product: BMP/retinoic acid inducible neural specific 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 8 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578813.1
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: complement(join(4809092..4810563,4880818..4881040,4942699..4942935,4954308..4954413,4998950..4999140,5013369..5013559,5192352..5192637,5211187..5211224))
location: region:4809092-5211224:-1
so has part: feature:5211187-5211224:-1:exon
so has part: feature:5192352-5192637:-1:exon
so has part: feature:5013369-5013559:-1:exon
so has part: feature:4998950-4999140:-1:exon
so has part: feature:4954308-4954413:-1:exon
so has part: feature:4942699-4942935:-1:exon
so has part: feature:4880818-4881040:-1:exon
so has part: feature:4809092-4810563:-1:exon

position:4809092:-1
position: 4809092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5211187-5211224:-1:exon

position:5211187:-1
position: 5211187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5192352-5192637:-1:exon

position:5192637:-1
position: 5192637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5013369-5013559:-1:exon

position:5013369:-1
position: 5013369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5013559:-1
position: 5013559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4998950-4999140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4954308-4954413:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4942699-4942935:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4880818-4881040:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4809092-4810563:-1:exon

BRINP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: BRINP3
product: BMP/retinoic acid inducible neural specific 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 8 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578812.2
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: complement(join(4809184..4810563,4880818..4881040,4942699..4942935,4954308..4954413,4998950..4999140,5013369..5013559,5192352..5192649))
location: region:4809184-5192649:-1
so has part: feature:5192352-5192649:-1:exon
so has part: feature:5013369-5013559:-1:exon
so has part: feature:4998950-4999140:-1:exon
so has part: feature:4954308-4954413:-1:exon
so has part: feature:4942699-4942935:-1:exon
so has part: feature:4880818-4881040:-1:exon
so has part: feature:4809184-4810563:-1:exon

position:4809184:-1
position: 4809184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5192649:-1
position: 5192649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5192352-5192649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5013369-5013559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4998950-4999140:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4954308-4954413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4942699-4942935:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4880818-4881040:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4809184-4810563:-1:exon

BRINP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: BRINP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BMP/retinoic acid-inducible neural-specific protein 3 isoform X1
translation: MIWRSRAGAEVFSLMALWEWIALSLHCWVLAVAAVSDQHATSPFDWLLSDKGPFHRSQEYTDFVDRSRQGFSTRYKIYREFGRWKVNNLAVERRHFLGSPLPLAPEFFRNIRLLGRRPTLQQITENLIKKYGTHFLLSATLGGEESLTIFVDKRKLSRRAEGSDSSTNSSSVTLETLHQLAASYFIDRDSTLRRLHHIQIASTAIKVTETRTGPLGCSNYDNLDSVSSVLVQSPENKIQLQGLQVLLPDYLQERFVQAALSYIACNSEGEFICKDNDCWCQCGPKFPECNCPSMDIQAMEENLLRITETWKAYSSDFEESDEFKLFMKRLPMNYFLNTSTLMHLWTMDSNFQRRYEQLENSMKQLFVKAQKIVHKLFSLSKRCHKQPLISLPRQRTSTYWLTRIQSFLYCNENGLLGSFSEETHSCTCPSDQVVCTAFLPCTVGDASACLTCAPDNRTRCGTCNTGYMLSQGLCKPEVAESTDHYIGFETDLQDLEMKYLLQKTDRRIEVHAIFISNDMRLNSWFDPSWRKRMLLTLKSNKYKSSLVHMILGLSLQICLTKNSTLEPVLAVYINPFGGSHSESWFMPVSENSFPDWERTKLDLPLQCYNWTLTLGNKWKTFFETVHIYLRSRIKSSGPNGNESIYYEPLEFIDPSRNLGYMKINNIQVFGYSMHFDPEAIRDLILQLDYPYTQGSQDSALLQLLEIRDRVNKLSPPGQRRLDLFSCLLRHRLKLSTSEVVRIQSALQAFNAKLPNTMDYDTTKLCS
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: complement(join(4809447..4810563,4880818..4881040,4942699..4942935,4954308..4954413,4998950..4999140,5013369..5013559,5192352..5192587))
location: region:4809447-5192587:-1
so has part: feature:5192352-5192587:-1:exon
so has part: feature:5013369-5013559:-1:exon
so has part: feature:4998950-4999140:-1:exon
so has part: feature:4954308-4954413:-1:exon
so has part: feature:4942699-4942935:-1:exon
so has part: feature:4880818-4881040:-1:exon
so has part: feature:4809447-4810563:-1:exon

XP_004578869.1
type: Protein
SIO_000068: ncbiprotein

position:4809447:-1
position: 4809447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5192587:-1
position: 5192587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5192352-5192587:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5013369-5013559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4998950-4999140:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4954308-4954413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4942699-4942935:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4880818-4881040:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4809447-4810563:-1:exon

BRINP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: BRINP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BMP/retinoic acid-inducible neural-specific protein 3 isoform X1
translation: MIWRSRAGAEVFSLMALWEWIALSLHCWVLAVAAVSDQHATSPFDWLLSDKGPFHRSQEYTDFVDRSRQGFSTRYKIYREFGRWKVNNLAVERRHFLGSPLPLAPEFFRNIRLLGRRPTLQQITENLIKKYGTHFLLSATLGGEESLTIFVDKRKLSRRAEGSDSSTNSSSVTLETLHQLAASYFIDRDSTLRRLHHIQIASTAIKVTETRTGPLGCSNYDNLDSVSSVLVQSPENKIQLQGLQVLLPDYLQERFVQAALSYIACNSEGEFICKDNDCWCQCGPKFPECNCPSMDIQAMEENLLRITETWKAYSSDFEESDEFKLFMKRLPMNYFLNTSTLMHLWTMDSNFQRRYEQLENSMKQLFVKAQKIVHKLFSLSKRCHKQPLISLPRQRTSTYWLTRIQSFLYCNENGLLGSFSEETHSCTCPSDQVVCTAFLPCTVGDASACLTCAPDNRTRCGTCNTGYMLSQGLCKPEVAESTDHYIGFETDLQDLEMKYLLQKTDRRIEVHAIFISNDMRLNSWFDPSWRKRMLLTLKSNKYKSSLVHMILGLSLQICLTKNSTLEPVLAVYINPFGGSHSESWFMPVSENSFPDWERTKLDLPLQCYNWTLTLGNKWKTFFETVHIYLRSRIKSSGPNGNESIYYEPLEFIDPSRNLGYMKINNIQVFGYSMHFDPEAIRDLILQLDYPYTQGSQDSALLQLLEIRDRVNKLSPPGQRRLDLFSCLLRHRLKLSTSEVVRIQSALQAFNAKLPNTMDYDTTKLCS
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: complement(join(4809447..4810563,4880818..4881040,4942699..4942935,4954308..4954413,4998950..4999140,5013369..5013559,5192352..5192587))
location: region:4809447-5192587:-1
so has part: feature:5192352-5192587:-1:exon
so has part: feature:5013369-5013559:-1:exon
so has part: feature:4998950-4999140:-1:exon
so has part: feature:4954308-4954413:-1:exon
so has part: feature:4942699-4942935:-1:exon
so has part: feature:4880818-4881040:-1:exon
so has part: feature:4809447-4810563:-1:exon

XP_004578870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5192352-5192587:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5013369-5013559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4998950-4999140:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4954308-4954413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4942699-4942935:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4880818-4881040:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4809447-4810563:-1:exon

BRINP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: BRINP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BMP/retinoic acid-inducible neural-specific protein 3 isoform X2
translation: MPQAPSTGSSLIRDPSIAHRNTQILWTEAGRDLAQDTRYTGEESLTIFVDKRKLSRRAEGSDSSTNSSSVTLETLHQLAASYFIDRDSTLRRLHHIQIASTAIKVTETRTGPLGCSNYDNLDSVSSVLVQSPENKIQLQGLQVLLPDYLQERFVQAALSYIACNSEGEFICKDNDCWCQCGPKFPECNCPSMDIQAMEENLLRITETWKAYSSDFEESDEFKLFMKRLPMNYFLNTSTLMHLWTMDSNFQRRYEQLENSMKQLFVKAQKIVHKLFSLSKRCHKQPLISLPRQRTSTYWLTRIQSFLYCNENGLLGSFSEETHSCTCPSDQVVCTAFLPCTVGDASACLTCAPDNRTRCGTCNTGYMLSQGLCKPEVAESTDHYIGFETDLQDLEMKYLLQKTDRRIEVHAIFISNDMRLNSWFDPSWRKRMLLTLKSNKYKSSLVHMILGLSLQICLTKNSTLEPVLAVYINPFGGSHSESWFMPVSENSFPDWERTKLDLPLQCYNWTLTLGNKWKTFFETVHIYLRSRIKSSGPNGNESIYYEPLEFIDPSRNLGYMKINNIQVFGYSMHFDPEAIRDLILQLDYPYTQGSQDSALLQLLEIRDRVNKLSPPGQRRLDLFSCLLRHRLKLSTSEVVRIQSALQAFNAKLPNTMDYDTTKLCS
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: complement(join(4809447..4810563,4880818..4881040,4942699..4942935,4954308..4954413,4998950..4999140,5192352..5192472))
location: region:4809447-5192472:-1
so has part: feature:5192352-5192472:-1:exon
so has part: feature:4998950-4999140:-1:exon
so has part: feature:4954308-4954413:-1:exon
so has part: feature:4942699-4942935:-1:exon
so has part: feature:4880818-4881040:-1:exon
so has part: feature:4809447-4810563:-1:exon

XP_004578871.1
type: Protein
SIO_000068: ncbiprotein

position:5192472:-1
position: 5192472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5192352-5192472:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4998950-4999140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4954308-4954413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4942699-4942935:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4880818-4881040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4809447-4810563:-1:exon

LOC118759205
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118759205
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 5008242..5008355
location: region:5008242-5008355:1
so has part: feature:5008242-5008355:1:exon

118759205
type: Gene
SIO_000068: ncbigene

position:5008242:1
position: 5008242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5008355:1
position: 5008355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5008242-5008355:1:exon

LOC118759205
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118759205
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118759205
subclass of: SO_0000673
so part of: LOC118759205
location: 5008242..5008355
location: region:5008242-5008355:1
so has part: feature:5008242-5008355:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5008242-5008355:1:exon

LOC101520483
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101520483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5240293..5273310)
location: region:5240293-5273310:-1
so has part: feature:5240293-5273310:-1:exon

101520483
type: Gene
SIO_000068: ncbigene

position:5240293:-1
position: 5240293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5273310:-1
position: 5273310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5240293-5273310:-1:exon

LOC101520483
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101520483
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC101520483
subclass of: SO_0000673
so part of: LOC101520483
location: complement(5240293..5240724)
location: region:5240293-5240724:-1
so has part: feature:5240293-5240724:-1:exon

position:5240724:-1
position: 5240724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5240293-5240724:-1:exon

LOC101520483
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101520483
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC101520483
subclass of: SO_0000673
so part of: LOC101520483
location: complement(5273190..5273310)
location: region:5273190-5273310:-1
so has part: feature:5273190-5273310:-1:exon

position:5273190:-1
position: 5273190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5273190-5273310:-1:exon

LOC118759128
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118759128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6238104..6238311)
location: region:6238104-6238311:-1
so has part: feature:6238104-6238311:-1:exon

118759128
type: Gene
SIO_000068: ncbigene

position:6238104:-1
position: 6238104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6238311:-1
position: 6238311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6238104-6238311:-1:exon

LOC118759128
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118759128
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC118759128
subclass of: SO_0000673
so part of: LOC118759128
location: complement(6238104..6238311)
location: region:6238104-6238311:-1
so has part: feature:6238104-6238311:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6238104-6238311:-1:exon

LOC118759119
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118759119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6338521..6351188)
location: region:6338521-6351188:-1
so has part: feature:6338521-6351188:-1:exon

118759119
type: Gene
SIO_000068: ncbigene

position:6338521:-1
position: 6338521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6351188:-1
position: 6351188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6338521-6351188:-1:exon

LOC118759119
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118759119
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC118759119
subclass of: SO_0000673
so part of: LOC118759119
location: complement(6338521..6339232)
location: region:6338521-6339232:-1
so has part: feature:6338521-6339232:-1:exon

position:6339232:-1
position: 6339232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6338521-6339232:-1:exon

LOC118759119
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118759119
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC118759119
subclass of: SO_0000673
so part of: LOC118759119
location: complement(6339269..6339322)
location: region:6339269-6339322:-1
so has part: feature:6339269-6339322:-1:exon

position:6339269:-1
position: 6339269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6339322:-1
position: 6339322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6339269-6339322:-1:exon

LOC118759119
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118759119
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC118759119
subclass of: SO_0000673
so part of: LOC118759119
location: complement(6345940..6346137)
location: region:6345940-6346137:-1
so has part: feature:6345940-6346137:-1:exon

position:6345940:-1
position: 6345940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6346137:-1
position: 6346137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6345940-6346137:-1:exon

LOC118759119
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118759119
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC118759119
subclass of: SO_0000673
so part of: LOC118759119
location: complement(6351149..6351188)
location: region:6351149-6351188:-1
so has part: feature:6351149-6351188:-1:exon

position:6351149:-1
position: 6351149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6351149-6351188:-1:exon

RGS18
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RGS18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6386115..6405487
location: region:6386115-6405487:1
so has part: feature:6386115-6405487:1:exon
subclass of: SO_0000010

101535516
type: Gene
SIO_000068: ncbigene

position:6386115:1
position: 6386115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6405487:1
position: 6405487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6386115-6405487:1:exon

RGS18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RGS18
product: regulator of G protein signaling 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_004578811.1
SIO_010081: RGS18
subclass of: SO_0000673
so part of: RGS18
location: join(6386115..6386233,6386887..6386988,6387507..6387568,6403653..6403819,6405230..6405487)
location: region:6386115-6405487:1
so has part: feature:6386115-6386233:1:exon
so has part: feature:6386887-6386988:1:exon
so has part: feature:6387507-6387568:1:exon
so has part: feature:6403653-6403819:1:exon
so has part: feature:6405230-6405487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6386115-6386233:1:exon

position:6386233:1
position: 6386233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6386887-6386988:1:exon

position:6386887:1
position: 6386887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6386988:1
position: 6386988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6387507-6387568:1:exon

position:6387507:1
position: 6387507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6387568:1
position: 6387568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6403653-6403819:1:exon

position:6403653:1
position: 6403653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6403819:1
position: 6403819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6405230-6405487:1:exon

position:6405230:1
position: 6405230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RGS18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RGS18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 18
translation: METSLVFFSPLNMCESKEKAFFKLLHGSGKEGTSKENKIRAKDKRNRLSLLVQKTEFHADSHPKRLGHLGKDERVPPEEAKKWGESFDQLLSHRDGLEAFTRFLKNEFSEENIEFWIACEDFKKIKEPQQIALTAKAMFEKFIQNDAPQEVNLDFHTKEVISQSIVQPTLHSFDAAQSRVYQLMEQDSYTRFLKSDIYLSLLEGRPRRPTNLRRRSRSFTCSEFQDVKSDVDIWL
SIO_010081: RGS18
subclass of: SO_0000673
so part of: RGS18
location: join(6386115..6386233,6386887..6386988,6387507..6387568,6403653..6403819,6405230..6405487)
location: region:6386115-6405487:1
so has part: feature:6386115-6386233:1:exon
so has part: feature:6386887-6386988:1:exon
so has part: feature:6387507-6387568:1:exon
so has part: feature:6403653-6403819:1:exon
so has part: feature:6405230-6405487:1:exon

XP_004578868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6386115-6386233:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6386887-6386988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6387507-6387568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6403653-6403819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6405230-6405487:1:exon

RGS21
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RGS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6558426..6575124
location: region:6558426-6575124:1
so has part: feature:6558426-6575124:1:exon
subclass of: SO_0000010

101535260
type: Gene
SIO_000068: ncbigene

position:6558426:1
position: 6558426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6575124:1
position: 6575124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6558426-6575124:1:exon

RGS21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RGS21
product: regulator of G protein signaling 21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins
transcript id: XM_004578810.2
SIO_010081: RGS21
subclass of: SO_0000673
so part of: RGS21
location: join(6558426..6558490,6562678..6562754,6566147..6566313,6574921..6575124)
location: region:6558426-6575124:1
so has part: feature:6558426-6558490:1:exon
so has part: feature:6562678-6562754:1:exon
so has part: feature:6566147-6566313:1:exon
so has part: feature:6574921-6575124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6558426-6558490:1:exon

position:6558490:1
position: 6558490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6562678-6562754:1:exon

position:6562678:1
position: 6562678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6562754:1
position: 6562754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6566147-6566313:1:exon

position:6566147:1
position: 6566147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6566313:1
position: 6566313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6574921-6575124:1:exon

position:6574921:1
position: 6574921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RGS21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RGS21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 21
translation: MPVKCCFYRSPTTESMAWSENMDTLLANQAGLDAFRTFLKSEFSEENVEFWLACEDFKKTESAEKIASKARMIYSEFIKADAPKEINIDFSTRDLISKNIAEPTLKCFDEAQKLIYSLMAKDSFPRFLKSEIYKKLVNSEQVGKHRKWLPFL
SIO_010081: RGS21
subclass of: SO_0000673
so part of: RGS21
location: join(6558480..6558490,6562678..6562754,6566147..6566313,6574921..6575124)
location: region:6558480-6575124:1
so has part: feature:6558480-6558490:1:exon
so has part: feature:6562678-6562754:1:exon
so has part: feature:6566147-6566313:1:exon
so has part: feature:6574921-6575124:1:exon

XP_004578867.1
type: Protein
SIO_000068: ncbiprotein

position:6558480:1
position: 6558480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6558480-6558490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6562678-6562754:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6566147-6566313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6574921-6575124:1:exon

RGS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RGS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6767446..6771205
location: region:6767446-6771205:1
so has part: feature:6767446-6771205:1:exon
subclass of: SO_0000010

101535011
type: Gene
SIO_000068: ncbigene

position:6767446:1
position: 6767446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6771205:1
position: 6771205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6767446-6771205:1:exon

RGS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RGS1
product: regulator of G protein signaling 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004578809.3
SIO_010081: RGS1
subclass of: SO_0000673
so part of: RGS1
location: join(6767446..6767596,6767935..6768015,6768442..6768503,6769808..6769971,6770625..6771205)
location: region:6767446-6771205:1
so has part: feature:6767446-6767596:1:exon
so has part: feature:6767935-6768015:1:exon
so has part: feature:6768442-6768503:1:exon
so has part: feature:6769808-6769971:1:exon
so has part: feature:6770625-6771205:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6767446-6767596:1:exon

position:6767596:1
position: 6767596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6767935-6768015:1:exon

position:6767935:1
position: 6767935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6768015:1
position: 6768015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6768442-6768503:1:exon

position:6768442:1
position: 6768442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6768503:1
position: 6768503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6769808-6769971:1:exon

position:6769808:1
position: 6769808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6769971:1
position: 6769971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6770625-6771205:1:exon

position:6770625:1
position: 6770625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RGS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RGS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 1
translation: MPGMFLSAHPKELKETGHSLLHDRTQKRRPKTFGMDMKAYLRSMIPHLESGIKSSKAKDILSADEVMQWSQSLERLLATQTGQDVFGNFLKSEFSEENIEFWLACEDYKKTESDHLHCKAEKIYKAFVHSDAAKQINIDFRTRESTAKRITAPTLTCFDEAQKVIFTLMEKDSYPRFLKSDIYLNLLNDLQANSLK
SIO_010081: RGS1
subclass of: SO_0000673
so part of: RGS1
location: join(6767499..6767596,6767935..6768015,6768442..6768503,6769808..6769971,6770625..6770810)
location: region:6767499-6770810:1
so has part: feature:6767499-6767596:1:exon
so has part: feature:6767935-6768015:1:exon
so has part: feature:6768442-6768503:1:exon
so has part: feature:6769808-6769971:1:exon
so has part: feature:6770625-6770810:1:exon

XP_004578866.1
type: Protein
SIO_000068: ncbiprotein

position:6767499:1
position: 6767499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6770810:1
position: 6770810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6767499-6767596:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6767935-6768015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6768442-6768503:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6769808-6769971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6770625-6770810:1:exon

RGS13
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RGS13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6837769..6851593
location: region:6837769-6851593:1
so has part: feature:6837769-6851593:1:exon
subclass of: SO_0000010

101534769
type: Gene
SIO_000068: ncbigene

position:6837769:1
position: 6837769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6851593:1
position: 6851593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6837769-6851593:1:exon

RGS13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RGS13
product: regulator of G protein signaling 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 Proteins
transcript id: XM_004578808.1
SIO_010081: RGS13
subclass of: SO_0000673
so part of: RGS13
location: join(6837769..6837833,6840755..6840816,6849836..6850002,6851411..6851593)
location: region:6837769-6851593:1
so has part: feature:6837769-6837833:1:exon
so has part: feature:6840755-6840816:1:exon
so has part: feature:6849836-6850002:1:exon
so has part: feature:6851411-6851593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6837769-6837833:1:exon

position:6837833:1
position: 6837833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6840755-6840816:1:exon

position:6840755:1
position: 6840755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6840816:1
position: 6840816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6849836-6850002:1:exon

position:6849836:1
position: 6849836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6850002:1
position: 6850002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6851411-6851593:1:exon

position:6851411:1
position: 6851411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RGS13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RGS13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 13
translation: MNRRNCWICKMCRDESKRSPSNLTLEEVLQWAQSFENLMATKYGPVVYSAYLKMEHSDENIKFWMACETYKKIDSRWSRISRAKKLYRIYIQPESPREINIDSSTREMIIRNIQEPTQTCFEEAQKTVYMHMVMDSYPRFLKSEMYQELLKTIQANNS
SIO_010081: RGS13
subclass of: SO_0000673
so part of: RGS13
location: join(6837769..6837833,6840755..6840816,6849836..6850002,6851411..6851593)
location: region:6837769-6851593:1
so has part: feature:6837769-6837833:1:exon
so has part: feature:6840755-6840816:1:exon
so has part: feature:6849836-6850002:1:exon
so has part: feature:6851411-6851593:1:exon

XP_004578865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6837769-6837833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6840755-6840816:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6849836-6850002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6851411-6851593:1:exon

RGS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6929448..6932234
location: region:6929448-6932234:1
so has part: feature:6929448-6932234:1:exon
subclass of: SO_0000010

101519982
type: Gene
SIO_000068: ncbigene

position:6929448:1
position: 6929448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6932234:1
position: 6932234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6929448-6932234:1:exon

RGS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RGS2
product: regulator of G protein signaling 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012930250.1
SIO_010081: RGS2
subclass of: SO_0000673
so part of: RGS2
location: join(6929448..6929582,6930320..6930421,6930524..6930585,6931012..6931178,6931370..6932234)
location: region:6929448-6932234:1
so has part: feature:6929448-6929582:1:exon
so has part: feature:6930320-6930421:1:exon
so has part: feature:6930524-6930585:1:exon
so has part: feature:6931012-6931178:1:exon
so has part: feature:6931370-6932234:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6929448-6929582:1:exon

position:6929582:1
position: 6929582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6930320-6930421:1:exon

position:6930320:1
position: 6930320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6930421:1
position: 6930421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6930524-6930585:1:exon

position:6930524:1
position: 6930524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6930585:1
position: 6930585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6931012-6931178:1:exon

position:6931012:1
position: 6931012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6931178:1
position: 6931178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6931370-6932234:1:exon

position:6931370:1
position: 6931370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RGS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 2
translation: MFLAVQHDCGAMDKSAGNVPKSEEKREKMKRTLLKDWKTRLSYFLQNSSTPGKPKTGKKSKQQAFIKPSPEEALLWSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYMDFIEKEAPKEINIDFQTKSLIAQNIQEATTGCFTTAQKRVYSLMENNSYPRFLESEFYQDLCKKPQITMEPRAT
SIO_010081: RGS2
subclass of: SO_0000673
so part of: RGS2
location: join(6929485..6929582,6930320..6930421,6930524..6930585,6931012..6931178,6931370..6931564)
location: region:6929485-6931564:1
so has part: feature:6929485-6929582:1:exon
so has part: feature:6930320-6930421:1:exon
so has part: feature:6930524-6930585:1:exon
so has part: feature:6931012-6931178:1:exon
so has part: feature:6931370-6931564:1:exon

XP_012785704.1
type: Protein
SIO_000068: ncbiprotein

position:6929485:1
position: 6929485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6931564:1
position: 6931564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6929485-6929582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6930320-6930421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6930524-6930585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6931012-6931178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6931370-6931564:1:exon

LOC118759127
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118759127
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6956125..6956696
location: region:6956125-6956696:1
so has part: feature:6956125-6956696:1:exon

118759127
type: Gene
SIO_000068: ncbigene

position:6956125:1
position: 6956125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6956696:1
position: 6956696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6956125-6956696:1:exon

LOC118759127
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118759127
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC118759127
subclass of: SO_0000673
so part of: LOC118759127
location: 6956125..6956696
location: region:6956125-6956696:1
so has part: feature:6956125-6956696:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6956125-6956696:1:exon

UCHL5
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: UCHL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7074949..7109541)
location: region:7074949-7109541:-1
so has part: feature:7074949-7109541:-1:exon
subclass of: SO_0000010

101534192
type: Gene
SIO_000068: ncbigene

position:7074949:-1
position: 7074949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7109541:-1
position: 7109541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7074949-7109541:-1:exon

UCHL5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: UCHL5
product: ubiquitin C-terminal hydrolase L5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 13 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004578807.2
SIO_010081: UCHL5
subclass of: SO_0000673
so part of: UCHL5
location: complement(join(7074949..7075215,7081284..7081382,7088541..7088651,7089669..7089771,7091330..7091393,7094614..7094744,7094816..7094877,7094960..7095085,7099720..7099825,7102912..7102975,7109334..7109541))
location: region:7074949-7109541:-1
so has part: feature:7109334-7109541:-1:exon
so has part: feature:7102912-7102975:-1:exon
so has part: feature:7099720-7099825:-1:exon
so has part: feature:7094960-7095085:-1:exon
so has part: feature:7094816-7094877:-1:exon
so has part: feature:7094614-7094744:-1:exon
so has part: feature:7091330-7091393:-1:exon
so has part: feature:7089669-7089771:-1:exon
so has part: feature:7088541-7088651:-1:exon
so has part: feature:7081284-7081382:-1:exon
so has part: feature:7074949-7075215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7109334-7109541:-1:exon

position:7109334:-1
position: 7109334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7102912-7102975:-1:exon

position:7102912:-1
position: 7102912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7102975:-1
position: 7102975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7099720-7099825:-1:exon

position:7099720:-1
position: 7099720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7099825:-1
position: 7099825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7094960-7095085:-1:exon

position:7094960:-1
position: 7094960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7095085:-1
position: 7095085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7094816-7094877:-1:exon

position:7094816:-1
position: 7094816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7094877:-1
position: 7094877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7094614-7094744:-1:exon

position:7094614:-1
position: 7094614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7094744:-1
position: 7094744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7091330-7091393:-1:exon

position:7091330:-1
position: 7091330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7091393:-1
position: 7091393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7089669-7089771:-1:exon

position:7089669:-1
position: 7089669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7089771:-1
position: 7089771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7088541-7088651:-1:exon

position:7088541:-1
position: 7088541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7088651:-1
position: 7088651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7081284-7081382:-1:exon

position:7081284:-1
position: 7081284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7081382:-1
position: 7081382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7074949-7075215:-1:exon

position:7075215:-1
position: 7075215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UCHL5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: UCHL5
product: ubiquitin C-terminal hydrolase L5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004578806.2
SIO_010081: UCHL5
subclass of: SO_0000673
so part of: UCHL5
location: complement(join(7074949..7075215,7081284..7081382,7088541..7088654,7089669..7089771,7091330..7091393,7094614..7094744,7094816..7094877,7094960..7095085,7099720..7099825,7102912..7102975,7109334..7109435))
location: region:7074949-7109435:-1
so has part: feature:7109334-7109435:-1:exon
so has part: feature:7102912-7102975:-1:exon
so has part: feature:7099720-7099825:-1:exon
so has part: feature:7094960-7095085:-1:exon
so has part: feature:7094816-7094877:-1:exon
so has part: feature:7094614-7094744:-1:exon
so has part: feature:7091330-7091393:-1:exon
so has part: feature:7089669-7089771:-1:exon
so has part: feature:7088541-7088654:-1:exon
so has part: feature:7081284-7081382:-1:exon
so has part: feature:7074949-7075215:-1:exon

position:7109435:-1
position: 7109435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7109334-7109435:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7102912-7102975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7099720-7099825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7094960-7095085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7094816-7094877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7094614-7094744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7091330-7091393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7089669-7089771:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7088541-7088654:-1:exon

position:7088654:-1
position: 7088654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7081284-7081382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7074949-7075215:-1:exon

UCHL5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: UCHL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X3
translation: MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPESFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCSHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMFEFDAKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEEPMDTDQGSNMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNAKKAQETK
SIO_010081: UCHL5
subclass of: SO_0000673
so part of: UCHL5
location: complement(join(7075171..7075215,7081284..7081382,7088541..7088651,7089669..7089771,7091330..7091393,7094614..7094744,7094816..7094877,7094960..7095085,7099720..7099825,7102912..7102975,7109334..7109409))
location: region:7075171-7109409:-1
so has part: feature:7109334-7109409:-1:exon
so has part: feature:7102912-7102975:-1:exon
so has part: feature:7099720-7099825:-1:exon
so has part: feature:7094960-7095085:-1:exon
so has part: feature:7094816-7094877:-1:exon
so has part: feature:7094614-7094744:-1:exon
so has part: feature:7091330-7091393:-1:exon
so has part: feature:7089669-7089771:-1:exon
so has part: feature:7088541-7088651:-1:exon
so has part: feature:7081284-7081382:-1:exon
so has part: feature:7075171-7075215:-1:exon

XP_004578864.1
type: Protein
SIO_000068: ncbiprotein

position:7075171:-1
position: 7075171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7109409:-1
position: 7109409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7109334-7109409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7102912-7102975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7099720-7099825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7094960-7095085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7094816-7094877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7094614-7094744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7091330-7091393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7089669-7089771:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7088541-7088651:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7081284-7081382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7075171-7075215:-1:exon

UCHL5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: UCHL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X2
translation: MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPESFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCSHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMFEFDAKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEEEPMDTDQGSNMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNAKKAQETK
SIO_010081: UCHL5
subclass of: SO_0000673
so part of: UCHL5
location: complement(join(7075171..7075215,7081284..7081382,7088541..7088654,7089669..7089771,7091330..7091393,7094614..7094744,7094816..7094877,7094960..7095085,7099720..7099825,7102912..7102975,7109334..7109409))
location: region:7075171-7109409:-1
so has part: feature:7109334-7109409:-1:exon
so has part: feature:7102912-7102975:-1:exon
so has part: feature:7099720-7099825:-1:exon
so has part: feature:7094960-7095085:-1:exon
so has part: feature:7094816-7094877:-1:exon
so has part: feature:7094614-7094744:-1:exon
so has part: feature:7091330-7091393:-1:exon
so has part: feature:7089669-7089771:-1:exon
so has part: feature:7088541-7088654:-1:exon
so has part: feature:7081284-7081382:-1:exon
so has part: feature:7075171-7075215:-1:exon

XP_004578863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7109334-7109409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7102912-7102975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7099720-7099825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7094960-7095085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7094816-7094877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7094614-7094744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7091330-7091393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7089669-7089771:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7088541-7088654:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7081284-7081382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7075171-7075215:-1:exon

UCHL5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: UCHL5
product: ubiquitin C-terminal hydrolase L5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578805.1
SIO_010081: UCHL5
subclass of: SO_0000673
so part of: UCHL5
location: complement(join(7078294..7078442,7081284..7081382,7088541..7088654,7089669..7089771,7091330..7091393,7094614..7094744,7094816..7094877,7094960..7095085,7099720..7099825,7102912..7102975,7109334..7109456))
location: region:7078294-7109456:-1
so has part: feature:7109334-7109456:-1:exon
so has part: feature:7102912-7102975:-1:exon
so has part: feature:7099720-7099825:-1:exon
so has part: feature:7094960-7095085:-1:exon
so has part: feature:7094816-7094877:-1:exon
so has part: feature:7094614-7094744:-1:exon
so has part: feature:7091330-7091393:-1:exon
so has part: feature:7089669-7089771:-1:exon
so has part: feature:7088541-7088654:-1:exon
so has part: feature:7081284-7081382:-1:exon
so has part: feature:7078294-7078442:-1:exon

position:7078294:-1
position: 7078294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7109456:-1
position: 7109456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7109334-7109456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7102912-7102975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7099720-7099825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7094960-7095085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7094816-7094877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7094614-7094744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7091330-7091393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7089669-7089771:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7088541-7088654:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7081284-7081382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7078294-7078442:-1:exon

position:7078442:-1
position: 7078442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UCHL5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: UCHL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1
translation: MTGNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPESFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCSHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMFEFDAKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEEEPMDTDQGSNMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKISDVGEGIFIKPPRRV
SIO_010081: UCHL5
subclass of: SO_0000673
so part of: UCHL5
location: complement(join(7078392..7078442,7081284..7081382,7088541..7088654,7089669..7089771,7091330..7091393,7094614..7094744,7094816..7094877,7094960..7095085,7099720..7099825,7102912..7102975,7109334..7109409))
location: region:7078392-7109409:-1
so has part: feature:7109334-7109409:-1:exon
so has part: feature:7102912-7102975:-1:exon
so has part: feature:7099720-7099825:-1:exon
so has part: feature:7094960-7095085:-1:exon
so has part: feature:7094816-7094877:-1:exon
so has part: feature:7094614-7094744:-1:exon
so has part: feature:7091330-7091393:-1:exon
so has part: feature:7089669-7089771:-1:exon
so has part: feature:7088541-7088654:-1:exon
so has part: feature:7081284-7081382:-1:exon
so has part: feature:7078392-7078442:-1:exon

XP_004578862.1
type: Protein
SIO_000068: ncbiprotein

position:7078392:-1
position: 7078392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7109334-7109409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7102912-7102975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7099720-7099825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7094960-7095085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7094816-7094877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7094614-7094744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7091330-7091393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7089669-7089771:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7088541-7088654:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7081284-7081382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7078392-7078442:-1:exon

LOC118759185
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118759185
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7107230..7107362)
location: region:7107230-7107362:-1
so has part: feature:7107230-7107362:-1:exon
subclass of: SO_0000578

118759185
type: Gene
SIO_000068: ncbigene

position:7107230:-1
position: 7107230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7107362:-1
position: 7107362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7107230-7107362:-1:exon

LOC118759185
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118759185
product: small nucleolar RNA U109
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01233
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004996030.1
SIO_010081: LOC118759185
subclass of: SO_0000673
so part of: LOC118759185
location: complement(7107230..7107362)
location: region:7107230-7107362:-1
so has part: feature:7107230-7107362:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7107230-7107362:-1:exon

RO60
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RO60
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7115934..7130302
location: region:7115934-7130302:1
so has part: feature:7115934-7130302:1:exon
subclass of: SO_0000010

101533950
type: Gene
SIO_000068: ncbigene

position:7115934:1
position: 7115934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7130302:1
position: 7130302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7115934-7130302:1:exon

RO60
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RO60
product: Ro60, Y RNA binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
transcript id: XM_004578804.1
SIO_010081: RO60
subclass of: SO_0000673
so part of: RO60
location: join(7115934..7116513,7124696..7124916,7125309..7125455,7125768..7125905,7127078..7127194,7128569..7128682,7128907..7129053,7130150..7130302)
location: region:7115934-7130302:1
so has part: feature:7115934-7116513:1:exon
so has part: feature:7124696-7124916:1:exon
so has part: feature:7125309-7125455:1:exon
so has part: feature:7125768-7125905:1:exon
so has part: feature:7127078-7127194:1:exon
so has part: feature:7128569-7128682:1:exon
so has part: feature:7128907-7129053:1:exon
so has part: feature:7130150-7130302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7115934-7116513:1:exon

position:7116513:1
position: 7116513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7124696-7124916:1:exon

position:7124696:1
position: 7124696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7124916:1
position: 7124916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7125309-7125455:1:exon

position:7125309:1
position: 7125309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7125455:1
position: 7125455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7125768-7125905:1:exon

position:7125768:1
position: 7125768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7125905:1
position: 7125905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7127078-7127194:1:exon

position:7127078:1
position: 7127078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7127194:1
position: 7127194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7128569-7128682:1:exon

position:7128569:1
position: 7128569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7128682:1
position: 7128682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7128907-7129053:1:exon

position:7128907:1
position: 7128907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7129053:1
position: 7129053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7130150-7130302:1:exon

position:7130150:1
position: 7130150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RO60
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RO60
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60 kDa SS-A/Ro ribonucleoprotein
translation: MEDAASPLQAPDARRPGSSKDSCGWQVTDQSRLRRFLCFGSEGGTYHVKEQKLGLENAEALLRLIEDGRGCEVIEDIRLFSEGGRTARPEPLLFALAVCSQCSDTGTKQAAFKAVSEVCRIPTHLFTFIQFKKDLRESMKCGMWGRALRKAVADWYNEKGGMALALAVTKYKQRNGWAHKDLLRLSHLKPSGEGLAIVTKYITKGWKEVRESYKEKALSVESEKLLKYLEAVEKVKRTRDELEVTHLIEEHRLVREHLLTDHLKSKEVWKALLQEMPLTTLLRNLGKMTANSVLGPGNSEVSSVCEKLCDEQLLKKACIHPLHVLIALETYKTGHAVRGKLKWHPDEEILKALDTAFYKTFKTVEPTGKRFLLAVDVSASMNQRVLGGVLNAGTAAAAMCMVAARTEQDSCVVAFSHGMQPCAVTADMTLPQVVSALNQIPAGATDCALPMLWAQGTGTAADVFVVFTGSEACAGSVRPAAALRDYRQKMDIPAKLIVCGMTSNGFAIADPDDRGMLDMCGFDAGALDVMRNFTLGVI
SIO_010081: RO60
subclass of: SO_0000673
so part of: RO60
location: join(7115934..7116513,7124696..7124916,7125309..7125455,7125768..7125905,7127078..7127194,7128569..7128682,7128907..7129053,7130150..7130302)
location: region:7115934-7130302:1
so has part: feature:7115934-7116513:1:exon
so has part: feature:7124696-7124916:1:exon
so has part: feature:7125309-7125455:1:exon
so has part: feature:7125768-7125905:1:exon
so has part: feature:7127078-7127194:1:exon
so has part: feature:7128569-7128682:1:exon
so has part: feature:7128907-7129053:1:exon
so has part: feature:7130150-7130302:1:exon

XP_004578861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7115934-7116513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7124696-7124916:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7125309-7125455:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7125768-7125905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7127078-7127194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7128569-7128682:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7128907-7129053:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7130150-7130302:1:exon

GLRX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: GLRX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7142981..7148481
location: region:7142981-7148481:1
so has part: feature:7142981-7148481:1:exon
subclass of: SO_0000010

101533700
type: Gene
SIO_000068: ncbigene

position:7142981:1
position: 7142981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7148481:1
position: 7148481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7142981-7148481:1:exon

GLRX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GLRX2
product: glutaredoxin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004578803.2
SIO_010081: GLRX2
subclass of: SO_0000673
so part of: GLRX2
location: join(7142981..7143095,7144929..7144992,7147456..7147632,7148232..7148481)
location: region:7142981-7148481:1
so has part: feature:7142981-7143095:1:exon
so has part: feature:7144929-7144992:1:exon
so has part: feature:7147456-7147632:1:exon
so has part: feature:7148232-7148481:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7142981-7143095:1:exon

position:7143095:1
position: 7143095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7144929-7144992:1:exon

position:7144929:1
position: 7144929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7144992:1
position: 7144992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7147456-7147632:1:exon

position:7147456:1
position: 7147456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7147632:1
position: 7147632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7148232-7148481:1:exon

position:7148232:1
position: 7148232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GLRX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GLRX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutaredoxin 2
translation: MSWRHTARVGTQLFRRGGGAAQRLVGTTRAAGMGSSTSPSLGSSAASPANQIQETISDNCVVIFSKTTCSYCTMAKKLFHDMNINYKVVELDMLEYGSQFQDALCKMTGERTVPRIFVNGTFIGGATDTHRLHKEGKLLPLVHQCYFKKSKRSEFQ
SIO_010081: GLRX2
subclass of: SO_0000673
so part of: GLRX2
location: join(7143001..7143095,7144929..7144992,7147456..7147632,7148232..7148366)
location: region:7143001-7148366:1
so has part: feature:7143001-7143095:1:exon
so has part: feature:7144929-7144992:1:exon
so has part: feature:7147456-7147632:1:exon
so has part: feature:7148232-7148366:1:exon

XP_004578860.2
type: Protein
SIO_000068: ncbiprotein

position:7143001:1
position: 7143001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7148366:1
position: 7148366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7143001-7143095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7144929-7144992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7147456-7147632:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7148232-7148366:1:exon

CDC73
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CDC73
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7169667..7253740
location: region:7169667-7253740:1
so has part: feature:7169667-7253740:1:exon
subclass of: SO_0000010

101519487
type: Gene
SIO_000068: ncbigene

position:7169667:1
position: 7169667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7253740:1
position: 7253740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7169667-7253740:1:exon

CDC73
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CDC73
product: cell division cycle 73
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012929901.2
SIO_010081: CDC73
subclass of: SO_0000673
so part of: CDC73
location: join(7169667..7169797,7172542..7172647,7181389..7181458,7185748..7185810,7185896..7185948,7190012..7190100,7197419..7197635,7201515..7201605,7204259..7204337,7206776..7206840,7237956..7238013,7240075..7240150,7242482..7242643,7245770..7245870,7252141..7252282,7253066..7253740)
location: region:7169667-7253740:1
so has part: feature:7169667-7169797:1:exon
so has part: feature:7172542-7172647:1:exon
so has part: feature:7181389-7181458:1:exon
so has part: feature:7185748-7185810:1:exon
so has part: feature:7185896-7185948:1:exon
so has part: feature:7190012-7190100:1:exon
so has part: feature:7197419-7197635:1:exon
so has part: feature:7201515-7201605:1:exon
so has part: feature:7204259-7204337:1:exon
so has part: feature:7206776-7206840:1:exon
so has part: feature:7237956-7238013:1:exon
so has part: feature:7240075-7240150:1:exon
so has part: feature:7242482-7242643:1:exon
so has part: feature:7245770-7245870:1:exon
so has part: feature:7252141-7252282:1:exon
so has part: feature:7253066-7253740:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7169667-7169797:1:exon

position:7169797:1
position: 7169797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7172542-7172647:1:exon

position:7172542:1
position: 7172542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7172647:1
position: 7172647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7181389-7181458:1:exon

position:7181389:1
position: 7181389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7181458:1
position: 7181458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7185748-7185810:1:exon

position:7185748:1
position: 7185748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7185810:1
position: 7185810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7185896-7185948:1:exon

position:7185896:1
position: 7185896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7185948:1
position: 7185948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7190012-7190100:1:exon

position:7190012:1
position: 7190012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7190100:1
position: 7190100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7197419-7197635:1:exon

position:7197419:1
position: 7197419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7197635:1
position: 7197635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7201515-7201605:1:exon

position:7201515:1
position: 7201515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7201605:1
position: 7201605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7204259-7204337:1:exon

position:7204259:1
position: 7204259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7204337:1
position: 7204337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7206776-7206840:1:exon

position:7206776:1
position: 7206776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7206840:1
position: 7206840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7237956-7238013:1:exon

position:7237956:1
position: 7237956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7238013:1
position: 7238013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7240075-7240150:1:exon

position:7240075:1
position: 7240075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7240150:1
position: 7240150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7242482-7242643:1:exon

position:7242482:1
position: 7242482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7242643:1
position: 7242643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7245770-7245870:1:exon

position:7245770:1
position: 7245770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7245870:1
position: 7245870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7252141-7252282:1:exon

position:7252141:1
position: 7252141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7252282:1
position: 7252282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7253066-7253740:1:exon

position:7253066:1
position: 7253066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDC73
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CDC73
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:7201573..7201575,aa:OTHER)
product: LOW QUALITY PROTEIN: parafibromin
translation: MADVLSVLRQYNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAADEVLAEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIRSLSEAMSVEKIAAIKAKIMAKKRSTIKTDLDDDITALKQRSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKNFSKNIFAILQSVIEKGXGTXQRPAPNAAPVDPTLRTKQPIPAAYNRYDQERFKGKEETEGFKIDTMGTYHGMTLKSVTEGASARKTQTPAAQPVPRPGLPSLFNTSLKLTSPLLFESAAGFAGFVPSDEKKKQGCQRENETLIQRRKDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKYDEVRLDPNVQKCDVTMLELSYRQRHLDRPVFLRFWETLDRYMVKHKSHLRF
SIO_010081: CDC73
subclass of: SO_0000673
so part of: CDC73
location: join(7169667..7169797,7172542..7172647,7181389..7181458,7185748..7185810,7185896..7185948,7190012..7190100,7197419..7197635,7201515..7201605,7204259..7204337,7206776..7206840,7237956..7238013,7240075..7240150,7242482..7242643,7245770..7245870,7252141..7252282,7253066..7253102)
location: region:7169667-7253102:1
so has part: feature:7169667-7169797:1:exon
so has part: feature:7172542-7172647:1:exon
so has part: feature:7181389-7181458:1:exon
so has part: feature:7185748-7185810:1:exon
so has part: feature:7185896-7185948:1:exon
so has part: feature:7190012-7190100:1:exon
so has part: feature:7197419-7197635:1:exon
so has part: feature:7201515-7201605:1:exon
so has part: feature:7204259-7204337:1:exon
so has part: feature:7206776-7206840:1:exon
so has part: feature:7237956-7238013:1:exon
so has part: feature:7240075-7240150:1:exon
so has part: feature:7242482-7242643:1:exon
so has part: feature:7245770-7245870:1:exon
so has part: feature:7252141-7252282:1:exon
so has part: feature:7253066-7253102:1:exon

XP_012785355.1
type: Protein
SIO_000068: ncbiprotein

position:7253102:1
position: 7253102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7169667-7169797:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7172542-7172647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7181389-7181458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7185748-7185810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7185896-7185948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7190012-7190100:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7197419-7197635:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7201515-7201605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7204259-7204337:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7206776-7206840:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7237956-7238013:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7240075-7240150:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7242482-7242643:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7245770-7245870:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7252141-7252282:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7253066-7253102:1:exon

B3GALT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: B3GALT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7221506..7228040)
location: region:7221506-7228040:-1
so has part: feature:7221506-7228040:-1:exon
subclass of: SO_0000010

101533467
type: Gene
SIO_000068: ncbigene

position:7221506:-1
position: 7221506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7228040:-1
position: 7228040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7221506-7228040:-1:exon

B3GALT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: B3GALT2
product: beta-1,3-galactosyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004578802.3
SIO_010081: B3GALT2
subclass of: SO_0000673
so part of: B3GALT2
location: complement(join(7221506..7223572,7227749..7228040))
location: region:7221506-7228040:-1
so has part: feature:7227749-7228040:-1:exon
so has part: feature:7221506-7223572:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7227749-7228040:-1:exon

position:7227749:-1
position: 7227749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7221506-7223572:-1:exon

position:7223572:-1
position: 7223572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

B3GALT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: B3GALT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,3-galactosyltransferase 2
translation: MLQWRRRHCCFAKMTWNAKRSLFRTHLVGVLSLVCLFAMLLFFSHQDWLPGRAGLKENPVTYTLRGFRSTKNETNHSSLRNIWKETIAQTATNANNTELAPEVTGLENTLSANGSMYNEKGTRYSNSYHFKYVINEPEKCQEKSPFLILLIAAEPGQIEARRAIRQTWGNESLVPGIKITRIFLLGLSIKSNGYLQRALLEESREYHDIIQQEYLDTYYNLTIKTLMGMNWVATYCPHTPYVMKTDSDMFVNTEYLIHKLLKPDLPPRHNYFTGYLMRGYAPNRNKDSKWYMPPELYPSERYPVFCSGTGYVFSGDLAGKIFKVSLGIRRLHLEDVYVGICLAKLRIDPVPPPNEFVFNHWRVSYSSCKYSHLITSHQFQPSELIKHWNHLQQNKHNACASAAKGKAGSYRHRKLH
SIO_010081: B3GALT2
subclass of: SO_0000673
so part of: B3GALT2
location: complement(7222199..7223449)
location: region:7222199-7223449:-1
so has part: feature:7222199-7223449:-1:exon

XP_004578859.1
type: Protein
SIO_000068: ncbiprotein

position:7222199:-1
position: 7222199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7223449:-1
position: 7223449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7222199-7223449:-1:exon

LOC101519238
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101519238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7275209..7277305
location: region:7275209-7277305:1
so has part: feature:7275209-7277305:1:exon
subclass of: SO_0000010

101519238
type: Gene
SIO_000068: ncbigene

position:7275209:1
position: 7275209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7277305:1
position: 7277305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7275209-7277305:1:exon

LOC101519238
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101519238
product: armadillo repeat-containing protein 6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_036495279.1
SIO_010081: LOC101519238
subclass of: SO_0000673
so part of: LOC101519238
location: join(7275209..7275307,7276040..7276196,7276515..7277305)
location: region:7275209-7277305:1
so has part: feature:7275209-7275307:1:exon
so has part: feature:7276040-7276196:1:exon
so has part: feature:7276515-7277305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7275209-7275307:1:exon

position:7275307:1
position: 7275307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7276040-7276196:1:exon

position:7276040:1
position: 7276040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7276196:1
position: 7276196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7276515-7277305:1:exon

position:7276515:1
position: 7276515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101519238
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101519238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 6-like
translation: MTDVLLEQSKPPGVTAGRSQCLFWWGLLDRLVKTLLPITAFECCLTFYHGEPQNIPPSSSGSCNVRSVIENGMILVTLESKRDERSKESQRDVLKALGDLQKSVSLSRPQEAAAHLDRFCEHCRVQPSTGRTYPIILAAWKLAAGDPGLALAALNALSALTDGQPDLLDPQGLQLLVAALARHADAADLTCSGLRCVRHACLKHEHRRQGLVKAGVLPQLTQAVAWRGRHADVVREACCALRVLALHKPENSRVIVEGGGALASLRAMKTHPQEVGVQKQACMLIRNLMVRSQAFSKRLLELGAEALITQARAAHHDCEDVAKAALRDLGCRVELRELWTGQKGNLAQ
SIO_010081: LOC101519238
subclass of: SO_0000673
so part of: LOC101519238
location: join(7275209..7275307,7276040..7276196,7276515..7277305)
location: region:7275209-7277305:1
so has part: feature:7275209-7275307:1:exon
so has part: feature:7276040-7276196:1:exon
so has part: feature:7276515-7277305:1:exon

XP_036351172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7275209-7275307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7276040-7276196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7276515-7277305:1:exon

LOC101518994
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101518994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7414514..7415193)
location: region:7414514-7415193:-1
so has part: feature:7414514-7415193:-1:exon

101518994
type: Gene
SIO_000068: ncbigene

position:7414514:-1
position: 7414514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7415193:-1
position: 7415193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7414514-7415193:-1:exon

LOC101518994
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101518994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC101518994
subclass of: SO_0000673
so part of: LOC101518994
location: complement(7414514..7415193)
location: region:7414514-7415193:-1
so has part: feature:7414514-7415193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7414514-7415193:-1:exon

LOC101518756
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101518756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7493446..7563216
location: region:7493446-7563216:1
so has part: feature:7493446-7563216:1:exon
subclass of: SO_0000010

101518756
type: Gene
SIO_000068: ncbigene

position:7493446:1
position: 7493446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7563216:1
position: 7563216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7493446-7563216:1:exon

LOC101518756
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101518756
product: 40S ribosomal protein S14-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
transcript id: XM_036495280.1
SIO_010081: LOC101518756
subclass of: SO_0000673
so part of: LOC101518756
location: join(7493446..7493489,7499870..7500016,7562733..7563216)
location: region:7493446-7563216:1
so has part: feature:7493446-7493489:1:exon
so has part: feature:7499870-7500016:1:exon
so has part: feature:7562733-7563216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7493446-7493489:1:exon

position:7493489:1
position: 7493489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7499870-7500016:1:exon

position:7499870:1
position: 7499870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7500016:1
position: 7500016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7562733-7563216:1:exon

position:7562733:1
position: 7562733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101518756
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101518756
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:7562956..7562958,aa:OTHER)
transl except: (pos:7562962..7562964,aa:OTHER)
product: LOW QUALITY PROTEIN: 40S ribosomal protein S14-like
translation: MSASTWETVAVPGAGNVTVLRKAVFQNQLLKHSLFPQLPRAEIQPWEGRLLGASRQVEPWAEQCGGVKGRCARKAPCKGKGKKEEQVISLGPQVAEGKNVFGVCHFLLSFNDTFVYVTNLSGKETICRVTGGMEVKADXGXSSPHAAMLAAQDVAQRCKELGITALHIKLQAAGGNRTETPAPGTQSALRALVRSGMKIGQIEDVTPIPSDSTGRKGGCRGRRL
SIO_010081: LOC101518756
subclass of: SO_0000673
so part of: LOC101518756
location: join(7493446..7493489,7499870..7500016,7562733..7563216)
location: region:7493446-7563216:1
so has part: feature:7493446-7493489:1:exon
so has part: feature:7499870-7500016:1:exon
so has part: feature:7562733-7563216:1:exon

XP_036351173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7493446-7493489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7499870-7500016:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7562733-7563216:1:exon

LOC101518519
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101518519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7798723..7799228)
location: region:7798723-7799228:-1
so has part: feature:7798723-7799228:-1:exon

101518519
type: Gene
SIO_000068: ncbigene

position:7798723:-1
position: 7798723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7799228:-1
position: 7799228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7798723-7799228:-1:exon

LOC101518519
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101518519
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC101518519
subclass of: SO_0000673
so part of: LOC101518519
location: complement(7798723..7799228)
location: region:7798723-7799228:-1
so has part: feature:7798723-7799228:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7798723-7799228:-1:exon

LOC118759192
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118759192
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(8215583..8215702)
location: region:8215583-8215702:-1
so has part: feature:8215583-8215702:-1:exon

118759192
type: Gene
SIO_000068: ncbigene

position:8215583:-1
position: 8215583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8215702:-1
position: 8215702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8215583-8215702:-1:exon

LOC118759192
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118759192
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118759192
subclass of: SO_0000673
so part of: LOC118759192
location: complement(8215583..8215702)
location: region:8215583-8215702:-1
so has part: feature:8215583-8215702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8215583-8215702:-1:exon

LOC101518273
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101518273
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8709562..8711581
location: region:8709562-8711581:1
so has part: feature:8709562-8711581:1:exon

101518273
type: Gene
SIO_000068: ncbigene

position:8709562:1
position: 8709562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8711581:1
position: 8711581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8709562-8711581:1:exon

LOC101518273
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101518273
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC101518273
subclass of: SO_0000673
so part of: LOC101518273
location: 8709562..8709785
location: region:8709562-8709785:1
so has part: feature:8709562-8709785:1:exon

position:8709785:1
position: 8709785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8709562-8709785:1:exon

LOC101518273
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101518273
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC101518273
subclass of: SO_0000673
so part of: LOC101518273
location: 8709926..8710052
location: region:8709926-8710052:1
so has part: feature:8709926-8710052:1:exon

position:8709926:1
position: 8709926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8710052:1
position: 8710052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8709926-8710052:1:exon

LOC101518273
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101518273
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC101518273
subclass of: SO_0000673
so part of: LOC101518273
location: 8710585..8711581
location: region:8710585-8711581:1
so has part: feature:8710585-8711581:1:exon

position:8710585:1
position: 8710585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8710585-8711581:1:exon

KCNT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: KCNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9243809..9627036)
location: region:9243809-9627036:-1
so has part: feature:9243809-9627036:-1:exon
subclass of: SO_0000010

101533227
type: Gene
SIO_000068: ncbigene

position:9243809:-1
position: 9243809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9627036:-1
position: 9627036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9243809-9627036:-1:exon

KCNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: KCNT2
product: potassium sodium-activated channel subfamily T member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004578801.3
SIO_010081: KCNT2
subclass of: SO_0000673
so part of: KCNT2
location: complement(join(9243809..9243997,9249887..9249971,9260206..9260497,9279502..9279630,9281146..9281229,9283320..9283421,9298014..9298125,9312715..9312849,9316561..9316632,9324550..9324722,9333375..9333480,9337768..9337981,9340482..9340711,9342280..9342429,9372838..9372946,9392466..9392574,9410326..9410389,9412408..9412544,9415087..9415251,9416301..9416481,9461765..9461859,9465890..9465973,9467117..9467191,9477616..9477675,9480219..9480267,9487945..9488044,9490238..9490317,9626942..9627036))
location: region:9243809-9627036:-1
so has part: feature:9626942-9627036:-1:exon
so has part: feature:9490238-9490317:-1:exon
so has part: feature:9487945-9488044:-1:exon
so has part: feature:9480219-9480267:-1:exon
so has part: feature:9477616-9477675:-1:exon
so has part: feature:9467117-9467191:-1:exon
so has part: feature:9465890-9465973:-1:exon
so has part: feature:9461765-9461859:-1:exon
so has part: feature:9416301-9416481:-1:exon
so has part: feature:9415087-9415251:-1:exon
so has part: feature:9412408-9412544:-1:exon
so has part: feature:9410326-9410389:-1:exon
so has part: feature:9392466-9392574:-1:exon
so has part: feature:9372838-9372946:-1:exon
so has part: feature:9342280-9342429:-1:exon
so has part: feature:9340482-9340711:-1:exon
so has part: feature:9337768-9337981:-1:exon
so has part: feature:9333375-9333480:-1:exon
so has part: feature:9324550-9324722:-1:exon
so has part: feature:9316561-9316632:-1:exon
so has part: feature:9312715-9312849:-1:exon
so has part: feature:9298014-9298125:-1:exon
so has part: feature:9283320-9283421:-1:exon
so has part: feature:9281146-9281229:-1:exon
so has part: feature:9279502-9279630:-1:exon
so has part: feature:9260206-9260497:-1:exon
so has part: feature:9249887-9249971:-1:exon
so has part: feature:9243809-9243997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9626942-9627036:-1:exon

position:9626942:-1
position: 9626942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9490238-9490317:-1:exon

position:9490238:-1
position: 9490238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9490317:-1
position: 9490317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9487945-9488044:-1:exon

position:9487945:-1
position: 9487945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9488044:-1
position: 9488044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9480219-9480267:-1:exon

position:9480219:-1
position: 9480219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9480267:-1
position: 9480267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9477616-9477675:-1:exon

position:9477616:-1
position: 9477616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9477675:-1
position: 9477675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9467117-9467191:-1:exon

position:9467117:-1
position: 9467117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9467191:-1
position: 9467191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9465890-9465973:-1:exon

position:9465890:-1
position: 9465890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9465973:-1
position: 9465973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9461765-9461859:-1:exon

position:9461765:-1
position: 9461765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9461859:-1
position: 9461859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9416301-9416481:-1:exon

position:9416301:-1
position: 9416301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9416481:-1
position: 9416481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9415087-9415251:-1:exon

position:9415087:-1
position: 9415087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9415251:-1
position: 9415251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9412408-9412544:-1:exon

position:9412408:-1
position: 9412408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9412544:-1
position: 9412544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9410326-9410389:-1:exon

position:9410326:-1
position: 9410326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9410389:-1
position: 9410389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9392466-9392574:-1:exon

position:9392466:-1
position: 9392466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9392574:-1
position: 9392574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9372838-9372946:-1:exon

position:9372838:-1
position: 9372838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9372946:-1
position: 9372946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9342280-9342429:-1:exon

position:9342280:-1
position: 9342280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9342429:-1
position: 9342429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9340482-9340711:-1:exon