Ochotona princeps isolate UAM:Mamm:113957 chromosome 14, OchPri4.0, whole genome shotgun sequence.
type: Entry
definition: Ochotona princeps isolate UAM:Mamm:113957 chromosome 14, OchPri4.0, whole genome shotgun sequence.
sequence version: NC_050549.1
sequence date: 2020-10-09
sequence: sequence
division: CON
label: NC_050549.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA666703
dblink: SAMN15664588
keyword: WGS
keyword: RefSeq
source: Ochotona princeps (American pika)
organism: Ochotona princeps
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM025734.1.\nAssembly name: OchPri4.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of British\nColumbia Okanagan on 2020/09/21. The original whole-genome shotgun\nproject has the accession JACJUE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of British Columbia\n Okanagan\nAssembly Method :: Dovetail HiRise v. 2017\nAssembly Name :: OchPri4.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: GCA_000292845.1\nGenome Coverage :: 23.68x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Ochotona princeps Annotation Release\n 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 122983744
topology: linear
so has quality: SO_0000987
location: 1..122983744
location: region:1-122983744:1
RO_0002162: 9978

NC_050549
type: RefSeq
SIO_000068: refseq

PRJNA666703
type: BioProject
SIO_000068: bioproject

SAMN15664588
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122983744:1
position: 122983744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-122983744:1:source
so part of: sequence
organism: Ochotona princeps
mol type: genomic DNA
isolate: UAM:Mamm:113957
chromosome: 14
sex: male
tissue type: liver
dev stage: adult
country: USA: Beaverhead-Deerlodge National Forest, Montana
lat lon: 45.34309 N 113.67609 W
collection date: 2010-06-19

9978
type: Taxonomy
SIO_000068: taxonomy

LOC101520060
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101520060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<38527..49462)
location: region:38527-49462:-1
so has part: feature:38527-49462:-1:exon
subclass of: SO_0000010

101520060
type: Gene
SIO_000068: ncbigene

position:38527:-1
position: 38527
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:49462:-1
position: 49462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38527-49462:-1:exon

LOC101520060
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101520060
product: ras GTPase-activating protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_012930760.2
SIO_010081: LOC101520060
subclass of: SO_0000673
so part of: LOC101520060
location: complement(join(<38527..38650,39269..39343,39722..39845,40546..40694,40947..41115,47981..48082,48986..49113,49439..49462))
location: region:38527-49462:-1
so has part: feature:49439-49462:-1:exon
so has part: feature:48986-49113:-1:exon
so has part: feature:47981-48082:-1:exon
so has part: feature:40947-41115:-1:exon
so has part: feature:40546-40694:-1:exon
so has part: feature:39722-39845:-1:exon
so has part: feature:39269-39343:-1:exon
so has part: feature:38527-38650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49439-49462:-1:exon

position:49439:-1
position: 49439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48986-49113:-1:exon

position:48986:-1
position: 48986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49113:-1
position: 49113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:47981-48082:-1:exon

position:47981:-1
position: 47981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48082:-1
position: 48082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:40947-41115:-1:exon

position:40947:-1
position: 40947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41115:-1
position: 41115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:40546-40694:-1:exon

position:40546:-1
position: 40546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40694:-1
position: 40694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:39722-39845:-1:exon

position:39722:-1
position: 39722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39845:-1
position: 39845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:39269-39343:-1:exon

position:39269:-1
position: 39269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39343:-1
position: 39343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:38527-38650:-1:exon

position:38650:-1
position: 38650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101520060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101520060
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(49063..49065),aa:OTHER)
product: LOW QUALITY PROTEIN: ras GTPase-activating protein 2-like
translation: MISKAWNKEKKVVKVIFWTGIFCWXVTISSSYTRKSQLQVEEEDIEKLEIRIDLWNNGNLVQDIFLVEIKFPVNVLRNDLSHQAWYLLQPRDNGNKTPKTDDLGSLRLHICCTEDYVLPSEHCGPLKTLLLKSPDVQLKSEPISASAAYILGEICGDKNDAVLLLVRLLLHHDKLVPFATAVAELDLKDTQDANTIFRGNSLATLCLDEMMKIVGGHYLKVTVKPVLDELQAICESSKSCEIDPITLKEGDNVESNKENLRYYVDKLFNTIVKSSMSCPTVMCNVFYSLRQMATQKFP
SIO_010081: LOC101520060
subclass of: SO_0000673
so part of: LOC101520060
location: complement(join(<38527..38650,39269..39343,39722..39845,40546..40694,40947..41115,47981..48082,48986..49113,49439..49462))
location: region:38527-49462:-1
so has part: feature:49439-49462:-1:exon
so has part: feature:48986-49113:-1:exon
so has part: feature:47981-48082:-1:exon
so has part: feature:40947-41115:-1:exon
so has part: feature:40546-40694:-1:exon
so has part: feature:39722-39845:-1:exon
so has part: feature:39269-39343:-1:exon
so has part: feature:38527-38650:-1:exon

XP_012786214.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49439-49462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48986-49113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47981-48082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40947-41115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40546-40694:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39722-39845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:39269-39343:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:38527-38650:-1:exon

MECOM
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: MECOM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 95120..636582
location: region:95120-636582:1
so has part: feature:95120-636582:1:exon
subclass of: SO_0000010

101517451
type: Gene
SIO_000068: ncbigene

position:95120:1
position: 95120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636582:1
position: 636582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95120-636582:1:exon

MECOM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MECOM
product: MDS1 and EVI1 complex locus, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 8 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036494941.1
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(95120..95481,359595..359932,577194..577328,588853..588955,592438..592654,597608..597755,599794..599947,604172..605528,608090..608177,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..636582)
location: region:95120-636582:1
so has part: feature:95120-95481:1:exon
so has part: feature:359595-359932:1:exon
so has part: feature:577194-577328:1:exon
so has part: feature:588853-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599794-599947:1:exon
so has part: feature:604172-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-636582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95120-95481:1:exon

position:95481:1
position: 95481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:359595-359932:1:exon

position:359595:1
position: 359595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359932:1
position: 359932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577194-577328:1:exon

position:577194:1
position: 577194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577328:1
position: 577328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:588853-588955:1:exon

position:588853:1
position: 588853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588955:1
position: 588955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:592438-592654:1:exon

position:592438:1
position: 592438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592654:1
position: 592654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:597608-597755:1:exon

position:597608:1
position: 597608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597755:1
position: 597755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:599794-599947:1:exon

position:599794:1
position: 599794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599947:1
position: 599947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:604172-605528:1:exon

position:604172:1
position: 604172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605528:1
position: 605528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:608090-608177:1:exon

position:608090:1
position: 608090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608177:1
position: 608177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:616878-617044:1:exon

position:616878:1
position: 616878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617044:1
position: 617044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:618111-618188:1:exon

position:618111:1
position: 618111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618188:1
position: 618188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:621907-622076:1:exon

position:621907:1
position: 621907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622076:1
position: 622076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:623994-624138:1:exon

position:623994:1
position: 623994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624138:1
position: 624138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:630019-630255:1:exon

position:630019:1
position: 630019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630255:1
position: 630255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:631058-631241:1:exon

position:631058:1
position: 631058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631241:1
position: 631241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:635046-636582:1:exon

position:635046:1
position: 635046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MECOM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MECOM
product: MDS1 and EVI1 complex locus, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 5 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036494939.1
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(95120..95481,359595..359932,577194..577328,588853..588955,592438..592654,597608..597755,599791..599947,604172..605528,608090..608177,611458..611484,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..636574)
location: region:95120-636574:1
so has part: feature:95120-95481:1:exon
so has part: feature:359595-359932:1:exon
so has part: feature:577194-577328:1:exon
so has part: feature:588853-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599791-599947:1:exon
so has part: feature:604172-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:611458-611484:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-636574:1:exon

position:636574:1
position: 636574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95120-95481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359595-359932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577194-577328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588853-588955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599791-599947:1:exon

position:599791:1
position: 599791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:604172-605528:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:611458-611484:1:exon

position:611458:1
position: 611458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611484:1
position: 611484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:635046-636574:1:exon

MECOM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MECOM
product: MDS1 and EVI1 complex locus, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 3 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036494940.1
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(95120..95481,359595..359932,577194..577328,588853..588955,592438..592654,597608..597755,599791..599947,604172..605528,608090..608177,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..636574)
location: region:95120-636574:1
so has part: feature:95120-95481:1:exon
so has part: feature:359595-359932:1:exon
so has part: feature:577194-577328:1:exon
so has part: feature:588853-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599791-599947:1:exon
so has part: feature:604172-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-636574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95120-95481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359595-359932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577194-577328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588853-588955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599791-599947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:604172-605528:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:635046-636574:1:exon

MECOM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MECOM
product: MDS1 and EVI1 complex locus, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 7 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004598608.3
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(95120..95481,359595..359932,577194..577328,588853..588955,592438..592654,597608..597755,599794..599947,604172..605528,608090..608177,611458..611484,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..636574)
location: region:95120-636574:1
so has part: feature:95120-95481:1:exon
so has part: feature:359595-359932:1:exon
so has part: feature:577194-577328:1:exon
so has part: feature:588853-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599794-599947:1:exon
so has part: feature:604172-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:611458-611484:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-636574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95120-95481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359595-359932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577194-577328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588853-588955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599794-599947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:604172-605528:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:611458-611484:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:635046-636574:1:exon

MECOM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MECOM
product: MDS1 and EVI1 complex locus, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 4 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036494942.1
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(95120..95481,359595..359932,577194..577328,588853..588955,592438..592654,597608..597755,599794..599947,605144..605528,608090..608177,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..636574)
location: region:95120-636574:1
so has part: feature:95120-95481:1:exon
so has part: feature:359595-359932:1:exon
so has part: feature:577194-577328:1:exon
so has part: feature:588853-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599794-599947:1:exon
so has part: feature:605144-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-636574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95120-95481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359595-359932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577194-577328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588853-588955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599794-599947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605144-605528:1:exon

position:605144:1
position: 605144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:635046-636574:1:exon

MECOM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MECOM
product: MDS1 and EVI1 complex locus, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 5 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004598610.3
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(95120..95481,577194..577328,588853..588955,592438..592654,597608..597755,599794..599947,604172..605528,608090..608177,611458..611484,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..636574)
location: region:95120-636574:1
so has part: feature:95120-95481:1:exon
so has part: feature:577194-577328:1:exon
so has part: feature:588853-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599794-599947:1:exon
so has part: feature:604172-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:611458-611484:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-636574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95120-95481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577194-577328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588853-588955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599794-599947:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:604172-605528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:611458-611484:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:635046-636574:1:exon

MECOM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MECOM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase MECOM isoform X1
translation: MRSKGRARKLATSNECVYSNSPEVPVEDMPDADGAGSTASLSVPEPCSPATSSEAFTPQDGSPYKAPIYIPDDIPIPAEFELRESNMPGAGLGIWTKRKIEVGEKFGPYVGEQRSNLKDPSYGWEILDEFCNVKFCIDASQADVGSWLKYIRFAGCQDQHNLVACQIDDQIFYRAVVEIAPGEELLLFMKSEDYPHEAMAPDIHEERQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQQKLESDSDLREIHAIQECKECDQVFPDLQSLEKHMLSHSEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKHYECENCAKQVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLKQHKHIHSSVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHFAAGGFFGQSISLPGTPAMDKTSMVNMSHANPGLADYFGANRHPAGLTFPTAPGFSFSFPGLFPSGLYHRPPLIPASSPVKGLSSTEQTNTSPSPLLTHPQILPATQDILKALSKHSPGGDSKPVELQAERSSEERPLEKLSDQSESSDLDDVSTPSGSDLETTSGSELDSDIESDKEKFKENGKMFKDKVSPLQNLASINNKKEYSNHSIFSPSLEEQTAVSGAVNDSIKAIASIAEKYFGSTGLVGLQDKKVGALPYPSMFPLPFFPAFSQSMYPFPDRDLRSLPLKVEPQSPNEVKKLQKGGSESPFDLTTKRKDEKPQTPVPSKPSATAATGQDQPLDLSMGSRSRASGAKVAEPRKNHVFGEKRGSSVEPRPASDGSLQHARPTPFFMDPIYRVEKRKLTDPLEALKEKYLRPAPGFLFHPQFQLPDQRTWMSAIENMAEKLESFSALKPDASELLQSMPSMFNFRAPPSALPESLLRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCDRCFGQQTNLDRHLKKHENGNMSGTATSSPHSELESTGAILDDKEDAYFTEIRNFIGNSNHGRQSPRNADERMNGSHFKDEKALVTSQHSDLLDDEEVEDEVLLDEEDEDNDMTGKTGKEPGTSHLHEGNPEDDYEDSSALEMSCKASPVRYKEEEYKSGLSALDHIRHFTDSLKMRQMEDNQYTEAELSSFSTSHVPEELKQPLPRKSKSQAYAMMLSLPDKESLHSPSHSSSTVWHSMARATAESSAIQSMSHV
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(95445..95481,359595..359932,577194..577328,588853..588955,592438..592654,597608..597755,599791..599947,604172..605528,608090..608177,611458..611484,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..635180)
location: region:95445-635180:1
so has part: feature:95445-95481:1:exon
so has part: feature:359595-359932:1:exon
so has part: feature:577194-577328:1:exon
so has part: feature:588853-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599791-599947:1:exon
so has part: feature:604172-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:611458-611484:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-635180:1:exon

XP_036350832.1
type: Protein
SIO_000068: ncbiprotein

position:95445:1
position: 95445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635180:1
position: 635180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95445-95481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359595-359932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577194-577328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588853-588955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599791-599947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:604172-605528:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:611458-611484:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:635046-635180:1:exon

MECOM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MECOM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase MECOM isoform X3
translation: MRSKGRARKLATSNECVYSNSPEVPVEDMPDADGAGSTASLSVPEPCSPATSSEAFTPQDGSPYKAPIYIPDDIPIPAEFELRESNMPGAGLGIWTKRKIEVGEKFGPYVGEQRSNLKDPSYGWEILDEFCNVKFCIDASQADVGSWLKYIRFAGCQDQHNLVACQIDDQIFYRAVVEIAPGEELLLFMKSEDYPHEAMAPDIHEERQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQQKLESDSDLREIHAIQECKECDQVFPDLQSLEKHMLSHSEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKHYECENCAKQVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLKQHKHIHSSVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHFAAGGFFGQSISLPGTPAMDKTSMVNMSHANPGLADYFGANRHPAGLTFPTAPGFSFSFPGLFPSGLYHRPPLIPASSPVKGLSSTEQTNTSPSPLLTHPQILPATQDILKALSKHSPGGDSKPVELQAERSSEERPLEKLSDQSESSDLDDVSTPSGSDLETTSGSELDSDIESDKEKFKENGKMFKDKVSPLQNLASINNKKEYSNHSIFSPSLEEQTAVSGAVNDSIKAIASIAEKYFGSTGLVGLQDKKVGALPYPSMFPLPFFPAFSQSMYPFPDRDLRSLPLKVEPQSPNEVKKLQKGGSESPFDLTTKRKDEKPQTPVPSKPSATAATGQDQPLDLSMGSRSRASGAKVAEPRKNHVFGEKRGSSVEPRPASDGSLQHARPTPFFMDPIYRVEKRKLTDPLEALKEKYLRPAPGFLFHPQMSAIENMAEKLESFSALKPDASELLQSMPSMFNFRAPPSALPESLLRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCDRCFGQQTNLDRHLKKHENGNMSGTATSSPHSELESTGAILDDKEDAYFTEIRNFIGNSNHGRQSPRNADERMNGSHFKDEKALVTSQHSDLLDDEEVEDEVLLDEEDEDNDMTGKTGKEPGTSHLHEGNPEDDYEDSSALEMSCKASPVRYKEEEYKSGLSALDHIRHFTDSLKMRQMEDNQYTEAELSSFSTSHVPEELKQPLPRKSKSQAYAMMLSLPDKESLHSPSHSSSTVWHSMARATAESSAIQSMSHV
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(95445..95481,359595..359932,577194..577328,588853..588955,592438..592654,597608..597755,599791..599947,604172..605528,608090..608177,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..635180)
location: region:95445-635180:1
so has part: feature:95445-95481:1:exon
so has part: feature:359595-359932:1:exon
so has part: feature:577194-577328:1:exon
so has part: feature:588853-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599791-599947:1:exon
so has part: feature:604172-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-635180:1:exon

XP_036350833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95445-95481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359595-359932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577194-577328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588853-588955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599791-599947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:604172-605528:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:635046-635180:1:exon

MECOM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MECOM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase MECOM isoform X2
translation: MRSKGRARKLATSNECVYSNSPEVPVEDMPDADGAGSTASLSVPEPCSPATSSEAFTPQDGSPYKAPIYIPDDIPIPAEFELRESNMPGAGLGIWTKRKIEVGEKFGPYVGEQRSNLKDPSYGWEILDEFCNVKFCIDASQADVGSWLKYIRFAGCQDQHNLVACQIDDQIFYRAVVEIAPGEELLLFMKSEDYPHEAMAPDIHEERQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQQKLESDSDLREIHAIQECKECDQVFPDLQSLEKHMLSHSEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKHYECENCAKVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLKQHKHIHSSVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHFAAGGFFGQSISLPGTPAMDKTSMVNMSHANPGLADYFGANRHPAGLTFPTAPGFSFSFPGLFPSGLYHRPPLIPASSPVKGLSSTEQTNTSPSPLLTHPQILPATQDILKALSKHSPGGDSKPVELQAERSSEERPLEKLSDQSESSDLDDVSTPSGSDLETTSGSELDSDIESDKEKFKENGKMFKDKVSPLQNLASINNKKEYSNHSIFSPSLEEQTAVSGAVNDSIKAIASIAEKYFGSTGLVGLQDKKVGALPYPSMFPLPFFPAFSQSMYPFPDRDLRSLPLKVEPQSPNEVKKLQKGGSESPFDLTTKRKDEKPQTPVPSKPSATAATGQDQPLDLSMGSRSRASGAKVAEPRKNHVFGEKRGSSVEPRPASDGSLQHARPTPFFMDPIYRVEKRKLTDPLEALKEKYLRPAPGFLFHPQFQLPDQRTWMSAIENMAEKLESFSALKPDASELLQSMPSMFNFRAPPSALPESLLRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCDRCFGQQTNLDRHLKKHENGNMSGTATSSPHSELESTGAILDDKEDAYFTEIRNFIGNSNHGRQSPRNADERMNGSHFKDEKALVTSQHSDLLDDEEVEDEVLLDEEDEDNDMTGKTGKEPGTSHLHEGNPEDDYEDSSALEMSCKASPVRYKEEEYKSGLSALDHIRHFTDSLKMRQMEDNQYTEAELSSFSTSHVPEELKQPLPRKSKSQAYAMMLSLPDKESLHSPSHSSSTVWHSMARATAESSAIQSMSHV
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(95445..95481,359595..359932,577194..577328,588853..588955,592438..592654,597608..597755,599794..599947,604172..605528,608090..608177,611458..611484,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..635180)
location: region:95445-635180:1
so has part: feature:95445-95481:1:exon
so has part: feature:359595-359932:1:exon
so has part: feature:577194-577328:1:exon
so has part: feature:588853-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599794-599947:1:exon
so has part: feature:604172-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:611458-611484:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-635180:1:exon

XP_004598665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95445-95481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359595-359932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577194-577328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588853-588955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599794-599947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:604172-605528:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:611458-611484:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:635046-635180:1:exon

MECOM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MECOM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase MECOM isoform X4
translation: MRSKGRARKLATSNECVYSNSPEVPVEDMPDADGAGSTASLSVPEPCSPATSSEAFTPQDGSPYKAPIYIPDDIPIPAEFELRESNMPGAGLGIWTKRKIEVGEKFGPYVGEQRSNLKDPSYGWEILDEFCNVKFCIDASQADVGSWLKYIRFAGCQDQHNLVACQIDDQIFYRAVVEIAPGEELLLFMKSEDYPHEAMAPDIHEERQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQQKLESDSDLREIHAIQECKECDQVFPDLQSLEKHMLSHSEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKHYECENCAKVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLKQHKHIHSSVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHFAAGGFFGQSISLPGTPAMDKTSMVNMSHANPGLADYFGANRHPAGLTFPTAPGFSFSFPGLFPSGLYHRPPLIPASSPVKGLSSTEQTNTSPSPLLTHPQILPATQDILKALSKHSPGGDSKPVELQAERSSEERPLEKLSDQSESSDLDDVSTPSGSDLETTSGSELDSDIESDKEKFKENGKMFKDKVSPLQNLASINNKKEYSNHSIFSPSLEEQTAVSGAVNDSIKAIASIAEKYFGSTGLVGLQDKKVGALPYPSMFPLPFFPAFSQSMYPFPDRDLRSLPLKVEPQSPNEVKKLQKGGSESPFDLTTKRKDEKPQTPVPSKPSATAATGQDQPLDLSMGSRSRASGAKVAEPRKNHVFGEKRGSSVEPRPASDGSLQHARPTPFFMDPIYRVEKRKLTDPLEALKEKYLRPAPGFLFHPQMSAIENMAEKLESFSALKPDASELLQSMPSMFNFRAPPSALPESLLRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCDRCFGQQTNLDRHLKKHENGNMSGTATSSPHSELESTGAILDDKEDAYFTEIRNFIGNSNHGRQSPRNADERMNGSHFKDEKALVTSQHSDLLDDEEVEDEVLLDEEDEDNDMTGKTGKEPGTSHLHEGNPEDDYEDSSALEMSCKASPVRYKEEEYKSGLSALDHIRHFTDSLKMRQMEDNQYTEAELSSFSTSHVPEELKQPLPRKSKSQAYAMMLSLPDKESLHSPSHSSSTVWHSMARATAESSAIQSMSHV
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(95445..95481,359595..359932,577194..577328,588853..588955,592438..592654,597608..597755,599794..599947,604172..605528,608090..608177,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..635180)
location: region:95445-635180:1
so has part: feature:95445-95481:1:exon
so has part: feature:359595-359932:1:exon
so has part: feature:577194-577328:1:exon
so has part: feature:588853-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599794-599947:1:exon
so has part: feature:604172-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-635180:1:exon

XP_036350834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95445-95481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359595-359932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577194-577328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588853-588955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599794-599947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:604172-605528:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:635046-635180:1:exon

MECOM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MECOM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase MECOM isoform X8
translation: MRSKGRARKLATSNECVYSNSPEVPVEDMPDADGAGSTASLSVPEPCSPATSSEAFTPQDGSPYKAPIYIPDDIPIPAEFELRESNMPGAGLGIWTKRKIEVGEKFGPYVGEQRSNLKDPSYGWEILDEFCNVKFCIDASQADVGSWLKYIRFAGCQDQHNLVACQIDDQIFYRAVVEIAPGEELLLFMKSEDYPHEAMAPDIHEERQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQQKLESDSDLREIHAIQECKECDQVFPDLQSLEKHMLSHSEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKHYECENCAKVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLKQHKHIHSSVKPFISFSQSMYPFPDRDLRSLPLKVEPQSPNEVKKLQKGGSESPFDLTTKRKDEKPQTPVPSKPSATAATGQDQPLDLSMGSRSRASGAKVAEPRKNHVFGEKRGSSVEPRPASDGSLQHARPTPFFMDPIYRVEKRKLTDPLEALKEKYLRPAPGFLFHPQMSAIENMAEKLESFSALKPDASELLQSMPSMFNFRAPPSALPESLLRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCDRCFGQQTNLDRHLKKHENGNMSGTATSSPHSELESTGAILDDKEDAYFTEIRNFIGNSNHGRQSPRNADERMNGSHFKDEKALVTSQHSDLLDDEEVEDEVLLDEEDEDNDMTGKTGKEPGTSHLHEGNPEDDYEDSSALEMSCKASPVRYKEEEYKSGLSALDHIRHFTDSLKMRQMEDNQYTEAELSSFSTSHVPEELKQPLPRKSKSQAYAMMLSLPDKESLHSPSHSSSTVWHSMARATAESSAIQSMSHV
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(95445..95481,359595..359932,577194..577328,588853..588955,592438..592654,597608..597755,599794..599947,605144..605528,608090..608177,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..635180)
location: region:95445-635180:1
so has part: feature:95445-95481:1:exon
so has part: feature:359595-359932:1:exon
so has part: feature:577194-577328:1:exon
so has part: feature:588853-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599794-599947:1:exon
so has part: feature:605144-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-635180:1:exon

XP_036350835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95445-95481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359595-359932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577194-577328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588853-588955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599794-599947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605144-605528:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:635046-635180:1:exon

MECOM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MECOM
product: MDS1 and EVI1 complex locus, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 4 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004598612.2
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(573437..574396,577194..577328,588853..588955,592438..592654,597608..597755,599794..599947,604172..605528,608090..608177,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..636582)
location: region:573437-636582:1
so has part: feature:573437-574396:1:exon
so has part: feature:577194-577328:1:exon
so has part: feature:588853-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599794-599947:1:exon
so has part: feature:604172-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-636582:1:exon

position:573437:1
position: 573437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573437-574396:1:exon

position:574396:1
position: 574396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577194-577328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588853-588955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599794-599947:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:604172-605528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:635046-636582:1:exon

MECOM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MECOM
product: MDS1 and EVI1 complex locus, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 3 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004598609.2
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(575992..576053,577194..577328,588853..588955,592438..592654,597608..597755,599791..599947,604172..605528,608090..608177,611458..611484,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..636574)
location: region:575992-636574:1
so has part: feature:575992-576053:1:exon
so has part: feature:577194-577328:1:exon
so has part: feature:588853-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599791-599947:1:exon
so has part: feature:604172-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:611458-611484:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-636574:1:exon

position:575992:1
position: 575992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575992-576053:1:exon

position:576053:1
position: 576053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577194-577328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588853-588955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599791-599947:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:604172-605528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:611458-611484:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:635046-636574:1:exon

MECOM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MECOM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase MECOM isoform X5
translation: MILDEFCNVKFCIDASQADVGSWLKYIRFAGCQDQHNLVACQIDDQIFYRAVVEIAPGEELLLFMKSEDYPHEAMAPDIHEERQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQQKLESDSDLREIHAIQECKECDQVFPDLQSLEKHMLSHSEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKHYECENCAKQVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLKQHKHIHSSVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHFAAGGFFGQSISLPGTPAMDKTSMVNMSHANPGLADYFGANRHPAGLTFPTAPGFSFSFPGLFPSGLYHRPPLIPASSPVKGLSSTEQTNTSPSPLLTHPQILPATQDILKALSKHSPGGDSKPVELQAERSSEERPLEKLSDQSESSDLDDVSTPSGSDLETTSGSELDSDIESDKEKFKENGKMFKDKVSPLQNLASINNKKEYSNHSIFSPSLEEQTAVSGAVNDSIKAIASIAEKYFGSTGLVGLQDKKVGALPYPSMFPLPFFPAFSQSMYPFPDRDLRSLPLKVEPQSPNEVKKLQKGGSESPFDLTTKRKDEKPQTPVPSKPSATAATGQDQPLDLSMGSRSRASGAKVAEPRKNHVFGEKRGSSVEPRPASDGSLQHARPTPFFMDPIYRVEKRKLTDPLEALKEKYLRPAPGFLFHPQFQLPDQRTWMSAIENMAEKLESFSALKPDASELLQSMPSMFNFRAPPSALPESLLRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCDRCFGQQTNLDRHLKKHENGNMSGTATSSPHSELESTGAILDDKEDAYFTEIRNFIGNSNHGRQSPRNADERMNGSHFKDEKALVTSQHSDLLDDEEVEDEVLLDEEDEDNDMTGKTGKEPGTSHLHEGNPEDDYEDSSALEMSCKASPVRYKEEEYKSGLSALDHIRHFTDSLKMRQMEDNQYTEAELSSFSTSHVPEELKQPLPRKSKSQAYAMMLSLPDKESLHSPSHSSSTVWHSMARATAESSAIQSMSHV
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(576051..576053,577194..577328,588853..588955,592438..592654,597608..597755,599791..599947,604172..605528,608090..608177,611458..611484,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..635180)
location: region:576051-635180:1
so has part: feature:576051-576053:1:exon
so has part: feature:577194-577328:1:exon
so has part: feature:588853-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599791-599947:1:exon
so has part: feature:604172-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:611458-611484:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-635180:1:exon

XP_004598666.1
type: Protein
SIO_000068: ncbiprotein

position:576051:1
position: 576051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576051-576053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577194-577328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588853-588955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599791-599947:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:604172-605528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:611458-611484:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:635046-635180:1:exon

MECOM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MECOM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase MECOM isoform X6
translation: MKSEDYPHEAMAPDIHEERQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQQKLESDSDLREIHAIQECKECDQVFPDLQSLEKHMLSHSEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKHYECENCAKVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLKQHKHIHSSVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHFAAGGFFGQSISLPGTPAMDKTSMVNMSHANPGLADYFGANRHPAGLTFPTAPGFSFSFPGLFPSGLYHRPPLIPASSPVKGLSSTEQTNTSPSPLLTHPQILPATQDILKALSKHSPGGDSKPVELQAERSSEERPLEKLSDQSESSDLDDVSTPSGSDLETTSGSELDSDIESDKEKFKENGKMFKDKVSPLQNLASINNKKEYSNHSIFSPSLEEQTAVSGAVNDSIKAIASIAEKYFGSTGLVGLQDKKVGALPYPSMFPLPFFPAFSQSMYPFPDRDLRSLPLKVEPQSPNEVKKLQKGGSESPFDLTTKRKDEKPQTPVPSKPSATAATGQDQPLDLSMGSRSRASGAKVAEPRKNHVFGEKRGSSVEPRPASDGSLQHARPTPFFMDPIYRVEKRKLTDPLEALKEKYLRPAPGFLFHPQFQLPDQRTWMSAIENMAEKLESFSALKPDASELLQSMPSMFNFRAPPSALPESLLRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCDRCFGQQTNLDRHLKKHENGNMSGTATSSPHSELESTGAILDDKEDAYFTEIRNFIGNSNHGRQSPRNADERMNGSHFKDEKALVTSQHSDLLDDEEVEDEVLLDEEDEDNDMTGKTGKEPGTSHLHEGNPEDDYEDSSALEMSCKASPVRYKEEEYKSGLSALDHIRHFTDSLKMRQMEDNQYTEAELSSFSTSHVPEELKQPLPRKSKSQAYAMMLSLPDKESLHSPSHSSSTVWHSMARATAESSAIQSMSHV
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(588907..588955,592438..592654,597608..597755,599794..599947,604172..605528,608090..608177,611458..611484,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..635180)
location: region:588907-635180:1
so has part: feature:588907-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599794-599947:1:exon
so has part: feature:604172-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:611458-611484:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-635180:1:exon

XP_004598667.1
type: Protein
SIO_000068: ncbiprotein

position:588907:1
position: 588907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588907-588955:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:599794-599947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604172-605528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611458-611484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:635046-635180:1:exon

MECOM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MECOM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase MECOM isoform X7
translation: MKSEDYPHEAMAPDIHEERQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQQKLESDSDLREIHAIQECKECDQVFPDLQSLEKHMLSHSEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKHYECENCAKVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLKQHKHIHSSVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHFAAGGFFGQSISLPGTPAMDKTSMVNMSHANPGLADYFGANRHPAGLTFPTAPGFSFSFPGLFPSGLYHRPPLIPASSPVKGLSSTEQTNTSPSPLLTHPQILPATQDILKALSKHSPGGDSKPVELQAERSSEERPLEKLSDQSESSDLDDVSTPSGSDLETTSGSELDSDIESDKEKFKENGKMFKDKVSPLQNLASINNKKEYSNHSIFSPSLEEQTAVSGAVNDSIKAIASIAEKYFGSTGLVGLQDKKVGALPYPSMFPLPFFPAFSQSMYPFPDRDLRSLPLKVEPQSPNEVKKLQKGGSESPFDLTTKRKDEKPQTPVPSKPSATAATGQDQPLDLSMGSRSRASGAKVAEPRKNHVFGEKRGSSVEPRPASDGSLQHARPTPFFMDPIYRVEKRKLTDPLEALKEKYLRPAPGFLFHPQMSAIENMAEKLESFSALKPDASELLQSMPSMFNFRAPPSALPESLLRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCDRCFGQQTNLDRHLKKHENGNMSGTATSSPHSELESTGAILDDKEDAYFTEIRNFIGNSNHGRQSPRNADERMNGSHFKDEKALVTSQHSDLLDDEEVEDEVLLDEEDEDNDMTGKTGKEPGTSHLHEGNPEDDYEDSSALEMSCKASPVRYKEEEYKSGLSALDHIRHFTDSLKMRQMEDNQYTEAELSSFSTSHVPEELKQPLPRKSKSQAYAMMLSLPDKESLHSPSHSSSTVWHSMARATAESSAIQSMSHV
SIO_010081: MECOM
subclass of: SO_0000673
so part of: MECOM
location: join(588907..588955,592438..592654,597608..597755,599794..599947,604172..605528,608090..608177,616878..617044,618111..618188,621907..622076,623994..624138,630019..630255,631058..631241,635046..635180)
location: region:588907-635180:1
so has part: feature:588907-588955:1:exon
so has part: feature:592438-592654:1:exon
so has part: feature:597608-597755:1:exon
so has part: feature:599794-599947:1:exon
so has part: feature:604172-605528:1:exon
so has part: feature:608090-608177:1:exon
so has part: feature:616878-617044:1:exon
so has part: feature:618111-618188:1:exon
so has part: feature:621907-622076:1:exon
so has part: feature:623994-624138:1:exon
so has part: feature:630019-630255:1:exon
so has part: feature:631058-631241:1:exon
so has part: feature:635046-635180:1:exon

XP_004598669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588907-588955:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592438-592654:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:597608-597755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:599794-599947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604172-605528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608090-608177:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:616878-617044:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:618111-618188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621907-622076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:623994-624138:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630019-630255:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:631058-631241:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:635046-635180:1:exon

LOC118759001
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118759001
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(611984..612089)
location: region:611984-612089:-1
so has part: feature:611984-612089:-1:exon

118759001
type: Gene
SIO_000068: ncbigene

position:611984:-1
position: 611984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612089:-1
position: 612089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611984-612089:-1:exon

LOC118759001
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118759001
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118759001
subclass of: SO_0000673
so part of: LOC118759001
location: complement(611984..612089)
location: region:611984-612089:-1
so has part: feature:611984-612089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:611984-612089:-1:exon

LOC101519573
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101519573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1478778..1494987)
location: region:1478778-1494987:-1
so has part: feature:1478778-1494987:-1:exon

101519573
type: Gene
SIO_000068: ncbigene

position:1478778:-1
position: 1478778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494987:-1
position: 1494987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478778-1494987:-1:exon

LOC101519573
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101519573
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC101519573
subclass of: SO_0000673
so part of: LOC101519573
location: complement(1478778..1479212)
location: region:1478778-1479212:-1
so has part: feature:1478778-1479212:-1:exon

position:1479212:-1
position: 1479212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478778-1479212:-1:exon

LOC101519573
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101519573
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC101519573
subclass of: SO_0000673
so part of: LOC101519573
location: complement(1494727..1494987)
location: region:1494727-1494987:-1
so has part: feature:1494727-1494987:-1:exon

position:1494727:-1
position: 1494727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1494727-1494987:-1:exon

GOLIM4
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: GOLIM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1582527..1654129
location: region:1582527-1654129:1
so has part: feature:1582527-1654129:1:exon
subclass of: SO_0000010

101517209
type: Gene
SIO_000068: ncbigene

position:1582527:1
position: 1582527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1654129:1
position: 1654129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1582527-1654129:1:exon

GOLIM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GOLIM4
product: golgi integral membrane protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 12% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004598607.3
SIO_010081: GOLIM4
subclass of: SO_0000673
so part of: GOLIM4
location: join(1582527..1582713,1624720..1624794,1626048..1626097,1626731..1626784,1628463..1628613,1632572..1632654,1633103..1633186,1636649..1636813,1639812..1640138,1642407..1642657,1643059..1643138,1644631..1644740,1647125..1647292,1648122..1648190,1653628..1653708,1653983..1654129)
location: region:1582527-1654129:1
so has part: feature:1582527-1582713:1:exon
so has part: feature:1624720-1624794:1:exon
so has part: feature:1626048-1626097:1:exon
so has part: feature:1626731-1626784:1:exon
so has part: feature:1628463-1628613:1:exon
so has part: feature:1632572-1632654:1:exon
so has part: feature:1633103-1633186:1:exon
so has part: feature:1636649-1636813:1:exon
so has part: feature:1639812-1640138:1:exon
so has part: feature:1642407-1642657:1:exon
so has part: feature:1643059-1643138:1:exon
so has part: feature:1644631-1644740:1:exon
so has part: feature:1647125-1647292:1:exon
so has part: feature:1648122-1648190:1:exon
so has part: feature:1653628-1653708:1:exon
so has part: feature:1653983-1654129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1582527-1582713:1:exon

position:1582713:1
position: 1582713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1624720-1624794:1:exon

position:1624720:1
position: 1624720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1624794:1
position: 1624794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1626048-1626097:1:exon

position:1626048:1
position: 1626048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626097:1
position: 1626097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1626731-1626784:1:exon

position:1626731:1
position: 1626731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626784:1
position: 1626784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1628463-1628613:1:exon

position:1628463:1
position: 1628463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1628613:1
position: 1628613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1632572-1632654:1:exon

position:1632572:1
position: 1632572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632654:1
position: 1632654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1633103-1633186:1:exon

position:1633103:1
position: 1633103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1633186:1
position: 1633186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1636649-1636813:1:exon

position:1636649:1
position: 1636649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1636813:1
position: 1636813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1639812-1640138:1:exon

position:1639812:1
position: 1639812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640138:1
position: 1640138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1642407-1642657:1:exon

position:1642407:1
position: 1642407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1642657:1
position: 1642657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1643059-1643138:1:exon

position:1643059:1
position: 1643059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1643138:1
position: 1643138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1644631-1644740:1:exon

position:1644631:1
position: 1644631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1644740:1
position: 1644740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1647125-1647292:1:exon

position:1647125:1
position: 1647125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647292:1
position: 1647292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1648122-1648190:1:exon

position:1648122:1
position: 1648122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648190:1
position: 1648190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1653628-1653708:1:exon

position:1653628:1
position: 1653628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653708:1
position: 1653708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1653983-1654129:1:exon

position:1653983:1
position: 1653983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GOLIM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GOLIM4
product: golgi integral membrane protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 12% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930761.2
SIO_010081: GOLIM4
subclass of: SO_0000673
so part of: GOLIM4
location: join(1582527..1582713,1624720..1624794,1626048..1626097,1626731..1626784,1628463..1628613,1632572..1632654,1636649..1636813,1639812..1640138,1642407..1642657,1643059..1643138,1644631..1644740,1647125..1647292,1648122..1648190,1653628..1653708,1653983..1654129)
location: region:1582527-1654129:1
so has part: feature:1582527-1582713:1:exon
so has part: feature:1624720-1624794:1:exon
so has part: feature:1626048-1626097:1:exon
so has part: feature:1626731-1626784:1:exon
so has part: feature:1628463-1628613:1:exon
so has part: feature:1632572-1632654:1:exon
so has part: feature:1636649-1636813:1:exon
so has part: feature:1639812-1640138:1:exon
so has part: feature:1642407-1642657:1:exon
so has part: feature:1643059-1643138:1:exon
so has part: feature:1644631-1644740:1:exon
so has part: feature:1647125-1647292:1:exon
so has part: feature:1648122-1648190:1:exon
so has part: feature:1653628-1653708:1:exon
so has part: feature:1653983-1654129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1582527-1582713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1624720-1624794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1626048-1626097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1626731-1626784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1628463-1628613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1632572-1632654:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1636649-1636813:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1639812-1640138:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1642407-1642657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1643059-1643138:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1644631-1644740:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1647125-1647292:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1648122-1648190:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1653628-1653708:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1653983-1654129:1:exon

GOLIM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GOLIM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi integral membrane protein 4 isoform X1
translation: MGNGVCSRKQKRIFQTLLLLTVVFGFLYGVMLYYELQTQLRKAEAVALKYQQHQESLSAQLQVVYEHRSRLEKSLQKERLEHKKAKEDFLVYKLEAQETLNKGRQDSNSRYSALSVQHQMLKSQHEELKKQHSDLEEEHRRQGEDFSRTFNDHKQKYLQLQQEKEQELSKLKETVYNLREENRQLRKAHQDIHTQLQDVKQQHKNLLSAHEQLVVTLEDHRSALAAAQTQVAEYKQLKDTLNRIPSFRKPEPAEAQHRSPTQAGRSQQGYQAAREKPTSEPRQGSRHNAMWQKQEAVPGRTEDMNSISPTKKEAEGQAPVGPDRQEVDPREAEEHRAEEEHRKALAEEEMEQVGQAERLEEEHDPSPEEQGQEWREQRGEVAAGLRERHAAQVPPSDQAVTRLRSPYEEQLEQQRLAARQAEEAQQLQEHQEALHQQRLREHLLRQRQQQLLAREVARPRQAQQEERGQQPQHQLRPQVHYEAMDNDVVQGAEDQAAQEEEGAYERDNPHQDEAEGEPGTRQEPRAQAPREVDPDSEADRAAAEDINPADDPNNQGEDEFEEAEQVREENLPDDNEEHKQSNQKEETVETEARLRVAGNPDQQEDNADEQYQEEGEEEVQEDLTEEKKRELEHNAEETYGENEENADDNNDGEEPGGHNEKHPQGREGHYAVEEEEEEDGAALVGKPRRRAEM
SIO_010081: GOLIM4
subclass of: SO_0000673
so part of: GOLIM4
location: join(1582527..1582713,1624720..1624794,1626048..1626097,1626731..1626784,1628463..1628613,1632572..1632654,1633103..1633186,1636649..1636813,1639812..1640138,1642407..1642657,1643059..1643138,1644631..1644740,1647125..1647292,1648122..1648190,1653628..1653708,1653983..1654129)
location: region:1582527-1654129:1
so has part: feature:1582527-1582713:1:exon
so has part: feature:1624720-1624794:1:exon
so has part: feature:1626048-1626097:1:exon
so has part: feature:1626731-1626784:1:exon
so has part: feature:1628463-1628613:1:exon
so has part: feature:1632572-1632654:1:exon
so has part: feature:1633103-1633186:1:exon
so has part: feature:1636649-1636813:1:exon
so has part: feature:1639812-1640138:1:exon
so has part: feature:1642407-1642657:1:exon
so has part: feature:1643059-1643138:1:exon
so has part: feature:1644631-1644740:1:exon
so has part: feature:1647125-1647292:1:exon
so has part: feature:1648122-1648190:1:exon
so has part: feature:1653628-1653708:1:exon
so has part: feature:1653983-1654129:1:exon

XP_004598664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1582527-1582713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1624720-1624794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1626048-1626097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1626731-1626784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1628463-1628613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1632572-1632654:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1633103-1633186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1636649-1636813:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1639812-1640138:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642407-1642657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1643059-1643138:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1644631-1644740:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1647125-1647292:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1648122-1648190:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1653628-1653708:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1653983-1654129:1:exon

GOLIM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GOLIM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi integral membrane protein 4 isoform X2
translation: MGNGVCSRKQKRIFQTLLLLTVVFGFLYGVMLYYELQTQLRKAEAVALKYQQHQESLSAQLQVVYEHRSRLEKSLQKERLEHKKAKEDFLVYKLEAQETLNKGRQDSNSRYSALSVQHQMLKSQHEELKKQHSDLEEEHRRQGEDFSRTFNDHKQKYLQLQQEKEQELSKLKETVYNLREENRQLRKAHQDIHTQLQDVKTQVAEYKQLKDTLNRIPSFRKPEPAEAQHRSPTQAGRSQQGYQAAREKPTSEPRQGSRHNAMWQKQEAVPGRTEDMNSISPTKKEAEGQAPVGPDRQEVDPREAEEHRAEEEHRKALAEEEMEQVGQAERLEEEHDPSPEEQGQEWREQRGEVAAGLRERHAAQVPPSDQAVTRLRSPYEEQLEQQRLAARQAEEAQQLQEHQEALHQQRLREHLLRQRQQQLLAREVARPRQAQQEERGQQPQHQLRPQVHYEAMDNDVVQGAEDQAAQEEEGAYERDNPHQDEAEGEPGTRQEPRAQAPREVDPDSEADRAAAEDINPADDPNNQGEDEFEEAEQVREENLPDDNEEHKQSNQKEETVETEARLRVAGNPDQQEDNADEQYQEEGEEEVQEDLTEEKKRELEHNAEETYGENEENADDNNDGEEPGGHNEKHPQGREGHYAVEEEEEEDGAALVGKPRRRAEM
SIO_010081: GOLIM4
subclass of: SO_0000673
so part of: GOLIM4
location: join(1582527..1582713,1624720..1624794,1626048..1626097,1626731..1626784,1628463..1628613,1632572..1632654,1636649..1636813,1639812..1640138,1642407..1642657,1643059..1643138,1644631..1644740,1647125..1647292,1648122..1648190,1653628..1653708,1653983..1654129)
location: region:1582527-1654129:1
so has part: feature:1582527-1582713:1:exon
so has part: feature:1624720-1624794:1:exon
so has part: feature:1626048-1626097:1:exon
so has part: feature:1626731-1626784:1:exon
so has part: feature:1628463-1628613:1:exon
so has part: feature:1632572-1632654:1:exon
so has part: feature:1636649-1636813:1:exon
so has part: feature:1639812-1640138:1:exon
so has part: feature:1642407-1642657:1:exon
so has part: feature:1643059-1643138:1:exon
so has part: feature:1644631-1644740:1:exon
so has part: feature:1647125-1647292:1:exon
so has part: feature:1648122-1648190:1:exon
so has part: feature:1653628-1653708:1:exon
so has part: feature:1653983-1654129:1:exon

XP_012786215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1582527-1582713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1624720-1624794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1626048-1626097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1626731-1626784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1628463-1628613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1632572-1632654:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1636649-1636813:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1639812-1640138:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1642407-1642657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1643059-1643138:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1644631-1644740:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1647125-1647292:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1648122-1648190:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1653628-1653708:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1653983-1654129:1:exon

LOC101519327
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101519327
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1660814..1661401
location: region:1660814-1661401:1
so has part: feature:1660814-1661401:1:exon

101519327
type: Gene
SIO_000068: ncbigene

position:1660814:1
position: 1660814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1661401:1
position: 1661401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1660814-1661401:1:exon

LOC101519327
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101519327
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins
pseudo: true
SIO_010081: LOC101519327
subclass of: SO_0000673
so part of: LOC101519327
location: 1660814..1661401
location: region:1660814-1661401:1
so has part: feature:1660814-1661401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1660814-1661401:1:exon

SERPINI1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SERPINI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1835843..1862043)
location: region:1835843-1862043:-1
so has part: feature:1835843-1862043:-1:exon
subclass of: SO_0000010

101516962
type: Gene
SIO_000068: ncbigene

position:1835843:-1
position: 1835843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1862043:-1
position: 1862043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1835843-1862043:-1:exon

SERPINI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SERPINI1
product: serpin family I member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004598606.3
SIO_010081: SERPINI1
subclass of: SO_0000673
so part of: SERPINI1
location: complement(join(1835843..1836070,1836943..1837032,1838383..1838469,1850678..1850775,1857231..1857435,1859673..1859867,1860577..1860807,1861800..1862043))
location: region:1835843-1862043:-1
so has part: feature:1861800-1862043:-1:exon
so has part: feature:1860577-1860807:-1:exon
so has part: feature:1859673-1859867:-1:exon
so has part: feature:1857231-1857435:-1:exon
so has part: feature:1850678-1850775:-1:exon
so has part: feature:1838383-1838469:-1:exon
so has part: feature:1836943-1837032:-1:exon
so has part: feature:1835843-1836070:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1861800-1862043:-1:exon

position:1861800:-1
position: 1861800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1860577-1860807:-1:exon

position:1860577:-1
position: 1860577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1860807:-1
position: 1860807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1859673-1859867:-1:exon

position:1859673:-1
position: 1859673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1859867:-1
position: 1859867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1857231-1857435:-1:exon

position:1857231:-1
position: 1857231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1857435:-1
position: 1857435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1850678-1850775:-1:exon

position:1850678:-1
position: 1850678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1850775:-1
position: 1850775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1838383-1838469:-1:exon

position:1838383:-1
position: 1838383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1838469:-1
position: 1838469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1836943-1837032:-1:exon

position:1836943:-1
position: 1836943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1837032:-1
position: 1837032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1835843-1836070:-1:exon

position:1836070:-1
position: 1836070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERPINI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SERPINI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroserpin
translation: MAVLGLLLVLQSVAVEAAFPDESIAELSVNMYNHLRATAEDENILFSPLSIALAVGMMELGAQGSTLREIRHSMGYEGLNNGEEFSFLKDFSDMATAEESQYMMKIANSLFVQNGFYINDEFLQMLKKYFNAEVNHVDFGQNIAAANHINRWVEDNTNNLLKDLVSPRDFDAGTHLALINAVYFKGNWKSQFRPENTRTFSFTKDDETEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVLSRQEVPLATLEPLVKAQLIDEWANSVKKQKVEVYLPRFTVEQGVDMKDILKALGITEVFIKNANLTSLSENEDLFLSTAIHKSFIEVNEEGSEAAAASGMVAISRMAVLYPQVIVDHPFFFLIRNRRAGTILFMGRVMHPEAMNTSGHDFEEL
SIO_010081: SERPINI1
subclass of: SO_0000673
so part of: SERPINI1
location: complement(join(1835994..1836070,1836943..1837032,1838383..1838469,1850678..1850775,1857231..1857435,1859673..1859867,1860577..1860807,1861800..1862043))
location: region:1835994-1862043:-1
so has part: feature:1861800-1862043:-1:exon
so has part: feature:1860577-1860807:-1:exon
so has part: feature:1859673-1859867:-1:exon
so has part: feature:1857231-1857435:-1:exon
so has part: feature:1850678-1850775:-1:exon
so has part: feature:1838383-1838469:-1:exon
so has part: feature:1836943-1837032:-1:exon
so has part: feature:1835994-1836070:-1:exon

XP_004598663.1
type: Protein
SIO_000068: ncbiprotein

position:1835994:-1
position: 1835994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1861800-1862043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1860577-1860807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1859673-1859867:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1857231-1857435:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1850678-1850775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1838383-1838469:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1836943-1837032:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1835994-1836070:-1:exon

LOC101519089
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101519089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1934754..1935416)
location: region:1934754-1935416:-1
so has part: feature:1934754-1935416:-1:exon

101519089
type: Gene
SIO_000068: ncbigene

position:1934754:-1
position: 1934754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1935416:-1
position: 1935416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1934754-1935416:-1:exon

LOC101519089
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101519089
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC101519089
subclass of: SO_0000673
so part of: LOC101519089
location: complement(1934754..1935416)
location: region:1934754-1935416:-1
so has part: feature:1934754-1935416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1934754-1935416:-1:exon

PDCD10
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PDCD10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1948395..1977177
location: region:1948395-1977177:1
so has part: feature:1948395-1977177:1:exon
subclass of: SO_0000010

101516712
type: Gene
SIO_000068: ncbigene

position:1948395:1
position: 1948395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1977177:1
position: 1977177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1948395-1977177:1:exon

PDCD10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PDCD10
product: programmed cell death 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004598605.2
SIO_010081: PDCD10
subclass of: SO_0000673
so part of: PDCD10
location: join(1948395..1948606,1962128..1962181,1967523..1967640,1968836..1968962,1973985..1974063,1974371..1974453,1976677..1977177)
location: region:1948395-1977177:1
so has part: feature:1948395-1948606:1:exon
so has part: feature:1962128-1962181:1:exon
so has part: feature:1967523-1967640:1:exon
so has part: feature:1968836-1968962:1:exon
so has part: feature:1973985-1974063:1:exon
so has part: feature:1974371-1974453:1:exon
so has part: feature:1976677-1977177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1948395-1948606:1:exon

position:1948606:1
position: 1948606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1962128-1962181:1:exon

position:1962128:1
position: 1962128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1962181:1
position: 1962181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1967523-1967640:1:exon

position:1967523:1
position: 1967523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1967640:1
position: 1967640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1968836-1968962:1:exon

position:1968836:1
position: 1968836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1968962:1
position: 1968962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1973985-1974063:1:exon

position:1973985:1
position: 1973985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1974063:1
position: 1974063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1974371-1974453:1:exon

position:1974371:1
position: 1974371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1974453:1
position: 1974453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1976677-1977177:1:exon

position:1976677:1
position: 1976677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDCD10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PDCD10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 10
translation: MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQDIIMKILEKKSVDVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDEINDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKTYFKDGKAINVFISANRLIHQTNLILQTFKTVA
SIO_010081: PDCD10
subclass of: SO_0000673
so part of: PDCD10
location: join(1948511..1948606,1962128..1962181,1967523..1967640,1968836..1968962,1973985..1974063,1974371..1974453,1976677..1976758)
location: region:1948511-1976758:1
so has part: feature:1948511-1948606:1:exon
so has part: feature:1962128-1962181:1:exon
so has part: feature:1967523-1967640:1:exon
so has part: feature:1968836-1968962:1:exon
so has part: feature:1973985-1974063:1:exon
so has part: feature:1974371-1974453:1:exon
so has part: feature:1976677-1976758:1:exon

XP_004598662.1
type: Protein
SIO_000068: ncbiprotein

position:1948511:1
position: 1948511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1976758:1
position: 1976758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1948511-1948606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1962128-1962181:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1967523-1967640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1968836-1968962:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1973985-1974063:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1974371-1974453:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1976677-1976758:1:exon

WDR49
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: WDR49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1989284..2096251
location: region:1989284-2096251:1
so has part: feature:1989284-2096251:1:exon
subclass of: SO_0000010

101518836
type: Gene
SIO_000068: ncbigene

position:1989284:1
position: 1989284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2096251:1
position: 2096251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1989284-2096251:1:exon

WDR49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: WDR49
product: WD repeat domain 49, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_036494871.1
SIO_010081: WDR49
subclass of: SO_0000673
so part of: WDR49
location: join(1989284..1989448,2003409..2003849,2007611..2007787,2008630..2008804,2018134..2018301,2020101..2020249,2032725..2032958,2044414..2044578,2049268..2049391,2052823..2052847,2059276..2059406,2061732..2061830,2063304..2063468,2065045..2065232,2066116..2066313,2067881..2068062,2076499..2076608,2078389..2078535,2096121..2096251)
location: region:1989284-2096251:1
so has part: feature:1989284-1989448:1:exon
so has part: feature:2003409-2003849:1:exon
so has part: feature:2007611-2007787:1:exon
so has part: feature:2008630-2008804:1:exon
so has part: feature:2018134-2018301:1:exon
so has part: feature:2020101-2020249:1:exon
so has part: feature:2032725-2032958:1:exon
so has part: feature:2044414-2044578:1:exon
so has part: feature:2049268-2049391:1:exon
so has part: feature:2052823-2052847:1:exon
so has part: feature:2059276-2059406:1:exon
so has part: feature:2061732-2061830:1:exon
so has part: feature:2063304-2063468:1:exon
so has part: feature:2065045-2065232:1:exon
so has part: feature:2066116-2066313:1:exon
so has part: feature:2067881-2068062:1:exon
so has part: feature:2076499-2076608:1:exon
so has part: feature:2078389-2078535:1:exon
so has part: feature:2096121-2096251:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1989284-1989448:1:exon

position:1989448:1
position: 1989448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2003409-2003849:1:exon

position:2003409:1
position: 2003409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2003849:1
position: 2003849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2007611-2007787:1:exon

position:2007611:1
position: 2007611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2007787:1
position: 2007787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2008630-2008804:1:exon

position:2008630:1
position: 2008630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2008804:1
position: 2008804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2018134-2018301:1:exon

position:2018134:1
position: 2018134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2018301:1
position: 2018301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2020101-2020249:1:exon

position:2020101:1
position: 2020101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2020249:1
position: 2020249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2032725-2032958:1:exon

position:2032725:1
position: 2032725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2032958:1
position: 2032958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2044414-2044578:1:exon

position:2044414:1
position: 2044414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2044578:1
position: 2044578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2049268-2049391:1:exon

position:2049268:1
position: 2049268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2049391:1
position: 2049391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2052823-2052847:1:exon

position:2052823:1
position: 2052823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2052847:1
position: 2052847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2059276-2059406:1:exon

position:2059276:1
position: 2059276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2059406:1
position: 2059406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2061732-2061830:1:exon

position:2061732:1
position: 2061732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2061830:1
position: 2061830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2063304-2063468:1:exon

position:2063304:1
position: 2063304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2063468:1
position: 2063468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2065045-2065232:1:exon

position:2065045:1
position: 2065045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2065232:1
position: 2065232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2066116-2066313:1:exon

position:2066116:1
position: 2066116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2066313:1
position: 2066313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2067881-2068062:1:exon

position:2067881:1
position: 2067881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068062:1
position: 2068062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2076499-2076608:1:exon

position:2076499:1
position: 2076499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2076608:1
position: 2076608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2078389-2078535:1:exon

position:2078389:1
position: 2078389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2078535:1
position: 2078535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2096121-2096251:1:exon

position:2096121:1
position: 2096121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: WDR49
product: WD repeat domain 49, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_036494872.1
SIO_010081: WDR49
subclass of: SO_0000673
so part of: WDR49
location: join(1989284..1989448,2003409..2003849,2007611..2007787,2008630..2008804,2018134..2018301,2020101..2020249,2032725..2032958,2044414..2044578,2049268..2049383,2059276..2059406,2061732..2061830,2063304..2063468,2065045..2065232,2066116..2066313,2067881..2068062,2076499..2076608,2078389..2078535,2096121..2096251)
location: region:1989284-2096251:1
so has part: feature:1989284-1989448:1:exon
so has part: feature:2003409-2003849:1:exon
so has part: feature:2007611-2007787:1:exon
so has part: feature:2008630-2008804:1:exon
so has part: feature:2018134-2018301:1:exon
so has part: feature:2020101-2020249:1:exon
so has part: feature:2032725-2032958:1:exon
so has part: feature:2044414-2044578:1:exon
so has part: feature:2049268-2049383:1:exon
so has part: feature:2059276-2059406:1:exon
so has part: feature:2061732-2061830:1:exon
so has part: feature:2063304-2063468:1:exon
so has part: feature:2065045-2065232:1:exon
so has part: feature:2066116-2066313:1:exon
so has part: feature:2067881-2068062:1:exon
so has part: feature:2076499-2076608:1:exon
so has part: feature:2078389-2078535:1:exon
so has part: feature:2096121-2096251:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1989284-1989448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2003409-2003849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2007611-2007787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2008630-2008804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2018134-2018301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2020101-2020249:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2032725-2032958:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2044414-2044578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2049268-2049383:1:exon

position:2049383:1
position: 2049383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2059276-2059406:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2061732-2061830:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2063304-2063468:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2065045-2065232:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2066116-2066313:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2067881-2068062:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2076499-2076608:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2078389-2078535:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2096121-2096251:1:exon

WDR49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: WDR49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 49 isoform X1
translation: MSYQKPVLELNTRSQPGPRSPERAEAVTAGEDYGTHLLENQLRVGDFVKIQRAFEPPEPSKITCMSREEFMQTMPEVVGWGSEEDYGKLFDRVDVTRDGFINWDKLNTFVLLSLYEKDEHMKATVVPQWKDLEFLAGKHKDTIQNVVFLRSLSRYLTISKEGLVGFWDENLKLQETFPITSDVMKLKHLWVTSLVSLENVNKVAVALTSKEICFYDLLSSEELSCQYKLQGLKAAPICMHYWYDPGDANTSVLSFGDVTGKVQAIVFTAASISLFESPENVCEDEEATVIINWAELLSGNHKCCHVLQHKLHRGDWVRQVMYSASLEAIISSTTSNASTVVLAWREKPKKVLKMTSFNIDQGIHAFDYHSRLNLIATAGINNQVCLWNPYVVSKPAGVLWGHSASVIAVQFFVERKQLFSFSQDKVLRLWDVQHQLSIQRIACAFPQIQDFRCLFHFDEARGRLFISCNNQLALLAMQSEISRRVRSHEKAVTCVLYSSLLRQVISSDAGSTVSFWMIDTGQKIKQFTSCHGNAEISSMALDANETRLLTGSTDGTIKVWDFNGFCHHTLIVGQDGAVDISQILVLKKTILVTGWQRYGFASLKRIKQAITVFRPQNFKQFFIQPEVWKGGVQHQDDILCAAFSPPQTLATGSYDGEIVLWNNSTENAHHVLHPKYQTLVKSQPDSKPQRCLSAGNSCSIRLQADQACRGPWSIQVDTEGNHAVTRLCFLEARKNIAATGGSNLVSCGGSGYVRFWDTFKKQLQAEFVAHNGVGPIIMCTDKLNRYLTTGDLDGRLKIWNIEEYCLNSSESRIAEAPPLLRSFQPHEDRISSLAMCEVGGCVLVLSSSADGSVCVTGICDTPVCIFGQAKHWNIENYLFLPERDTDLEEGDVQKKEVRAIPVFSKEKSCLEPKEHSPLSKEITDDSTYQLRPCEDINLVMNYKERNSYMKNTQELSSGEAVQQAPSVFRLLHVGSLRELPVVCKPSFLLDPEQYFRAEAPDNHPPSPELPALSETLKSVFDEKNLFPKDILDRERKAKQLCQETSCEMKIRRNKKQL
SIO_010081: WDR49
subclass of: SO_0000673
so part of: WDR49
location: join(1989284..1989448,2003409..2003849,2007611..2007787,2008630..2008804,2018134..2018301,2020101..2020249,2032725..2032958,2044414..2044578,2049268..2049391,2052823..2052847,2059276..2059406,2061732..2061830,2063304..2063468,2065045..2065232,2066116..2066313,2067881..2068062,2076499..2076608,2078389..2078535,2096121..2096251)
location: region:1989284-2096251:1
so has part: feature:1989284-1989448:1:exon
so has part: feature:2003409-2003849:1:exon
so has part: feature:2007611-2007787:1:exon
so has part: feature:2008630-2008804:1:exon
so has part: feature:2018134-2018301:1:exon
so has part: feature:2020101-2020249:1:exon
so has part: feature:2032725-2032958:1:exon
so has part: feature:2044414-2044578:1:exon
so has part: feature:2049268-2049391:1:exon
so has part: feature:2052823-2052847:1:exon
so has part: feature:2059276-2059406:1:exon
so has part: feature:2061732-2061830:1:exon
so has part: feature:2063304-2063468:1:exon
so has part: feature:2065045-2065232:1:exon
so has part: feature:2066116-2066313:1:exon
so has part: feature:2067881-2068062:1:exon
so has part: feature:2076499-2076608:1:exon
so has part: feature:2078389-2078535:1:exon
so has part: feature:2096121-2096251:1:exon

XP_036350764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1989284-1989448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2003409-2003849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2007611-2007787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2008630-2008804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2018134-2018301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2020101-2020249:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2032725-2032958:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2044414-2044578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2049268-2049391:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2052823-2052847:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2059276-2059406:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2061732-2061830:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2063304-2063468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2065045-2065232:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2066116-2066313:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2067881-2068062:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2076499-2076608:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2078389-2078535:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2096121-2096251:1:exon

WDR49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: WDR49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 49 isoform X2
translation: MSYQKPVLELNTRSQPGPRSPERAEAVTAGEDYGTHLLENQLRVGDFVKIQRAFEPPEPSKITCMSREEFMQTMPEVVGWGSEEDYGKLFDRVDVTRDGFINWDKLNTFVLLSLYEKDEHMKATVVPQWKDLEFLAGKHKDTIQNVVFLRSLSRYLTISKEGLVGFWDENLKLQETFPITSDVMKLKHLWVTSLVSLENVNKVAVALTSKEICFYDLLSSEELSCQYKLQGLKAAPICMHYWYDPGDANTSVLSFGDVTGKVQAIVFTAASISLFESPENVCEDEEATVIINWAELLSGNHKCCHVLQHKLHRGDWVRQVMYSASLEAIISSTTSNASTVVLAWREKPKKVLKMTSFNIDQGIHAFDYHSRLNLIATAGINNQVCLWNPYVVSKPAGVLWGHSASVIAVQFFVERKQLFSFSQDKVLRLWDVQHQLSIQRIACAFPQIQDFRCLFHFDEARGRLFISCNNQLALLAMQSEISRRVRSHEKAVTCVLYSSLLRQVISSDAGSTVSFWMIDTGQKIKQFTSCHGNAEISSMALDANETRLLTGSTDGTIKVWDFNGFCHHTLIVGQDGAVDISQILVLKKTILVTGWQRAITVFRPQNFKQFFIQPEVWKGGVQHQDDILCAAFSPPQTLATGSYDGEIVLWNNSTENAHHVLHPKYQTLVKSQPDSKPQRCLSAGNSCSIRLQADQACRGPWSIQVDTEGNHAVTRLCFLEARKNIAATGGSNLVSCGGSGYVRFWDTFKKQLQAEFVAHNGVGPIIMCTDKLNRYLTTGDLDGRLKIWNIEEYCLNSSESRIAEAPPLLRSFQPHEDRISSLAMCEVGGCVLVLSSSADGSVCVTGICDTPVCIFGQAKHWNIENYLFLPERDTDLEEGDVQKKEVRAIPVFSKEKSCLEPKEHSPLSKEITDDSTYQLRPCEDINLVMNYKERNSYMKNTQELSSGEAVQQAPSVFRLLHVGSLRELPVVCKPSFLLDPEQYFRAEAPDNHPPSPELPALSETLKSVFDEKNLFPKDILDRERKAKQLCQETSCEMKIRRNKKQL
SIO_010081: WDR49
subclass of: SO_0000673
so part of: WDR49
location: join(1989284..1989448,2003409..2003849,2007611..2007787,2008630..2008804,2018134..2018301,2020101..2020249,2032725..2032958,2044414..2044578,2049268..2049383,2059276..2059406,2061732..2061830,2063304..2063468,2065045..2065232,2066116..2066313,2067881..2068062,2076499..2076608,2078389..2078535,2096121..2096251)
location: region:1989284-2096251:1
so has part: feature:1989284-1989448:1:exon
so has part: feature:2003409-2003849:1:exon
so has part: feature:2007611-2007787:1:exon
so has part: feature:2008630-2008804:1:exon
so has part: feature:2018134-2018301:1:exon
so has part: feature:2020101-2020249:1:exon
so has part: feature:2032725-2032958:1:exon
so has part: feature:2044414-2044578:1:exon
so has part: feature:2049268-2049383:1:exon
so has part: feature:2059276-2059406:1:exon
so has part: feature:2061732-2061830:1:exon
so has part: feature:2063304-2063468:1:exon
so has part: feature:2065045-2065232:1:exon
so has part: feature:2066116-2066313:1:exon
so has part: feature:2067881-2068062:1:exon
so has part: feature:2076499-2076608:1:exon
so has part: feature:2078389-2078535:1:exon
so has part: feature:2096121-2096251:1:exon

XP_036350765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1989284-1989448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2003409-2003849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2007611-2007787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2008630-2008804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2018134-2018301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2020101-2020249:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2032725-2032958:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2044414-2044578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2049268-2049383:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2059276-2059406:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2061732-2061830:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2063304-2063468:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2065045-2065232:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2066116-2066313:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2067881-2068062:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2076499-2076608:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2078389-2078535:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2096121-2096251:1:exon

SERPINI2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SERPINI2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2098592..2133526
location: region:2098592-2133526:1
so has part: feature:2098592-2133526:1:exon
subclass of: SO_0000010

101518594
type: Gene
SIO_000068: ncbigene

position:2098592:1
position: 2098592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2133526:1
position: 2133526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2098592-2133526:1:exon

SERPINI2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SERPINI2
product: serpin family I member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_036494809.1
SIO_010081: SERPINI2
subclass of: SO_0000673
so part of: SERPINI2
location: join(2098592..2098622,2098748..2098942,2099025..2099217,2120256..2120353,2123174..2123260,2128988..2129077,2133450..2133526)
location: region:2098592-2133526:1
so has part: feature:2098592-2098622:1:exon
so has part: feature:2098748-2098942:1:exon
so has part: feature:2099025-2099217:1:exon
so has part: feature:2120256-2120353:1:exon
so has part: feature:2123174-2123260:1:exon
so has part: feature:2128988-2129077:1:exon
so has part: feature:2133450-2133526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2098592-2098622:1:exon

position:2098622:1
position: 2098622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2098748-2098942:1:exon

position:2098748:1
position: 2098748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2098942:1
position: 2098942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2099025-2099217:1:exon

position:2099025:1
position: 2099025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2099217:1
position: 2099217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2120256-2120353:1:exon

position:2120256:1
position: 2120256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2120353:1
position: 2120353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2123174-2123260:1:exon

position:2123174:1
position: 2123174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2123260:1
position: 2123260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2128988-2129077:1:exon

position:2128988:1
position: 2128988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2129077:1
position: 2129077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2133450-2133526:1:exon

position:2133450:1
position: 2133450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SERPINI2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SERPINI2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serpin I2
translation: MFNIIPRLSQRKIKDMVSEEEFGPLTRLVLVNAIYFKGNWKQKFRREDTELMNFTKQNGSAVPIPMMKALLRTKYGHFSEFSINYQVLELPYEGDEFSLILILPAEGVNIEEVEKLLSAHRVLKWSSEINEKTVEVSIPRFKVEQKLDFKEPLHSLNVTELFNGGCDLSGITDSSEVYVSRIMQKVFFEINEEGSEAAASTGMHIPTIMSLAQNQFIANRPFLFIMKNNPTESILFMGRVTNPDTDTMKGRDFDSL
SIO_010081: SERPINI2
subclass of: SO_0000673
so part of: SERPINI2
location: join(2098592..2098622,2098748..2098942,2099025..2099217,2120256..2120353,2123174..2123260,2128988..2129077,2133450..2133526)
location: region:2098592-2133526:1
so has part: feature:2098592-2098622:1:exon
so has part: feature:2098748-2098942:1:exon
so has part: feature:2099025-2099217:1:exon
so has part: feature:2120256-2120353:1:exon
so has part: feature:2123174-2123260:1:exon
so has part: feature:2128988-2129077:1:exon
so has part: feature:2133450-2133526:1:exon

XP_036350702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2098592-2098622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2098748-2098942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2099025-2099217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2120256-2120353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2123174-2123260:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2128988-2129077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2133450-2133526:1:exon

ZBBX
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ZBBX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2182536..2289000
location: region:2182536-2289000:1
so has part: feature:2182536-2289000:1:exon
subclass of: SO_0000010

101518349
type: Gene
SIO_000068: ncbigene

position:2182536:1
position: 2182536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2289000:1
position: 2289000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2182536-2289000:1:exon

ZBBX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ZBBX
product: zinc finger B-box domain containing
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004598613.2
SIO_010081: ZBBX
subclass of: SO_0000673
so part of: ZBBX
location: join(2182536..2182642,2184567..2184680,2198811..2198901,2203125..2203173,2204038..2204147,2210921..2211016,2233801..2233941,2240306..2240471,2242515..2242520,2245126..2245246,2248530..2248639,2248998..2249089,2250668..2250747,2252006..2252145,2256949..2257256,2267022..2267172,2272987..2273100,2279147..2279404,2287200..2287338,2288737..2289000)
location: region:2182536-2289000:1
so has part: feature:2182536-2182642:1:exon
so has part: feature:2184567-2184680:1:exon
so has part: feature:2198811-2198901:1:exon
so has part: feature:2203125-2203173:1:exon
so has part: feature:2204038-2204147:1:exon
so has part: feature:2210921-2211016:1:exon
so has part: feature:2233801-2233941:1:exon
so has part: feature:2240306-2240471:1:exon
so has part: feature:2242515-2242520:1:exon
so has part: feature:2245126-2245246:1:exon
so has part: feature:2248530-2248639:1:exon
so has part: feature:2248998-2249089:1:exon
so has part: feature:2250668-2250747:1:exon
so has part: feature:2252006-2252145:1:exon
so has part: feature:2256949-2257256:1:exon
so has part: feature:2267022-2267172:1:exon
so has part: feature:2272987-2273100:1:exon
so has part: feature:2279147-2279404:1:exon
so has part: feature:2287200-2287338:1:exon
so has part: feature:2288737-2289000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2182536-2182642:1:exon

position:2182642:1
position: 2182642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2184567-2184680:1:exon

position:2184567:1
position: 2184567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2184680:1
position: 2184680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2198811-2198901:1:exon

position:2198811:1
position: 2198811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2198901:1
position: 2198901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2203125-2203173:1:exon

position:2203125:1
position: 2203125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2203173:1
position: 2203173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2204038-2204147:1:exon

position:2204038:1
position: 2204038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2204147:1
position: 2204147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2210921-2211016:1:exon

position:2210921:1
position: 2210921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2211016:1
position: 2211016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2233801-2233941:1:exon

position:2233801:1
position: 2233801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2233941:1
position: 2233941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2240306-2240471:1:exon

position:2240306:1
position: 2240306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2240471:1
position: 2240471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2242515-2242520:1:exon

position:2242515:1
position: 2242515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2242520:1
position: 2242520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2245126-2245246:1:exon

position:2245126:1
position: 2245126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2245246:1
position: 2245246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2248530-2248639:1:exon

position:2248530:1
position: 2248530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2248639:1
position: 2248639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2248998-2249089:1:exon

position:2248998:1
position: 2248998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2249089:1
position: 2249089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2250668-2250747:1:exon

position:2250668:1
position: 2250668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2250747:1
position: 2250747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2252006-2252145:1:exon

position:2252006:1
position: 2252006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2252145:1
position: 2252145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2256949-2257256:1:exon

position:2256949:1
position: 2256949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2257256:1
position: 2257256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2267022-2267172:1:exon

position:2267022:1
position: 2267022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2267172:1
position: 2267172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2272987-2273100:1:exon

position:2272987:1
position: 2272987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2273100:1
position: 2273100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2279147-2279404:1:exon

position:2279147:1
position: 2279147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2279404:1
position: 2279404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2287200-2287338:1:exon

position:2287200:1
position: 2287200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2287338:1
position: 2287338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2288737-2289000:1:exon

position:2288737:1
position: 2288737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZBBX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ZBBX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger B-box domain-containing protein 1
translation: MNTKDFVVLPWGKSGNSVKLRYKHAKELRMEKVQLELENEEMEKKLKEFRFARSKEKEEMGSNGYHWTSGKVGKLSHQSHTMLQSKGNPVKFSSQNLRFKFLKEQTQESVKQPFNSKMANSLRSEKSKTKGRVCGQCENKAALLVCLECGEDYCSGCFAKIHQKGALKLHRTTLLQAKSQILSSVLEAAHQFIKEAALENTATGESPGGRQEPRAPVHRGSSAVDVAVGKRTECTSPGEKLLLEGSFSEAASAQSFQEALRQWRAGSHEEERQNLPKAVKNSLEECEVQTTLKIWREPLHIEFKEDSLSYMEKLWLKKHRRTPPERRLSMVPGTFTALCATSGEVQCPQMENDEDRDDTNSKPSYFLPTEELNIESPEPSLKIVELDKTYEEDFGDPGSIVPYKVELADADYHQCCTFDEYQKNSFPCENGVYRHVFNKGQMAHLHLCLTNSFTHCKDDVTAGSPHSDLDNMVDPSAYCPDADQIEECSTSERNVKEKGVDAESNQNSDYYCISLEREDSLESLDSEKPSIDEKVTQGVKESLGFSNLPKWPDFEDSKTAHSLLWLQDIALRSKPIIEKYQGLERFFIFDTNEKVNSPSHSLAGTRSTHRNTFAGDREWLPSHSVSTHADHAVALGVLRTVQKLSIGKPQNTAQKSQRPSSANLPLSSSVKRGSRCLPASPFQSRRTAAQSQSTTAAQVSETEGLANADQNEAFLDDTADQQTIASLEKELNVLRNPADPSEERYSLASEGLPASDIPSLTPSWTSGGFVTPSPVRAPCGVEQLSSSGKYTEIPSTLSLSESSTDEEEEFLDKQQVIVLP
SIO_010081: ZBBX
subclass of: SO_0000673
so part of: ZBBX
location: join(2182575..2182642,2184567..2184680,2198811..2198901,2203125..2203173,2204038..2204147,2210921..2211016,2233801..2233941,2240306..2240471,2242515..2242520,2245126..2245246,2248530..2248639,2248998..2249089,2250668..2250747,2252006..2252145,2256949..2257256,2267022..2267172,2272987..2273100,2279147..2279404,2287200..2287338,2288737..2288845)
location: region:2182575-2288845:1
so has part: feature:2182575-2182642:1:exon
so has part: feature:2184567-2184680:1:exon
so has part: feature:2198811-2198901:1:exon
so has part: feature:2203125-2203173:1:exon
so has part: feature:2204038-2204147:1:exon
so has part: feature:2210921-2211016:1:exon
so has part: feature:2233801-2233941:1:exon
so has part: feature:2240306-2240471:1:exon
so has part: feature:2242515-2242520:1:exon
so has part: feature:2245126-2245246:1:exon
so has part: feature:2248530-2248639:1:exon
so has part: feature:2248998-2249089:1:exon
so has part: feature:2250668-2250747:1:exon
so has part: feature:2252006-2252145:1:exon
so has part: feature:2256949-2257256:1:exon
so has part: feature:2267022-2267172:1:exon
so has part: feature:2272987-2273100:1:exon
so has part: feature:2279147-2279404:1:exon
so has part: feature:2287200-2287338:1:exon
so has part: feature:2288737-2288845:1:exon

XP_004598670.2
type: Protein
SIO_000068: ncbiprotein

position:2182575:1
position: 2182575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2288845:1
position: 2288845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2182575-2182642:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2184567-2184680:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2198811-2198901:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2203125-2203173:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2204038-2204147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2210921-2211016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2233801-2233941:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2240306-2240471:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2242515-2242520:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2245126-2245246:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2248530-2248639:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2248998-2249089:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2250668-2250747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2252006-2252145:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2256949-2257256:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2267022-2267172:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2272987-2273100:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2279147-2279404:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2287200-2287338:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2288737-2288845:1:exon

LOC101520482
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101520482
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2398028..2398688
location: region:2398028-2398688:1
so has part: feature:2398028-2398688:1:exon

101520482
type: Gene
SIO_000068: ncbigene

position:2398028:1
position: 2398028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398688:1
position: 2398688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2398028-2398688:1:exon

LOC101520482
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101520482
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
pseudo: true
SIO_010081: LOC101520482
subclass of: SO_0000673
so part of: LOC101520482
location: 2398028..2398688
location: region:2398028-2398688:1
so has part: feature:2398028-2398688:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2398028-2398688:1:exon

GRK7
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: GRK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2469629..2497870
location: region:2469629-2497870:1
so has part: feature:2469629-2497870:1:exon
subclass of: SO_0000010

101519737
type: Gene
SIO_000068: ncbigene

position:2469629:1
position: 2469629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2497870:1
position: 2497870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2469629-2497870:1:exon

GRK7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GRK7
product: G protein-coupled receptor kinase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_004599629.1
SIO_010081: GRK7
subclass of: SO_0000673
so part of: GRK7
location: join(2469629..2470240,2470789..2471226,2488666..2488940,2497534..2497870)
location: region:2469629-2497870:1
so has part: feature:2469629-2470240:1:exon
so has part: feature:2470789-2471226:1:exon
so has part: feature:2488666-2488940:1:exon
so has part: feature:2497534-2497870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2469629-2470240:1:exon

position:2470240:1
position: 2470240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2470789-2471226:1:exon

position:2470789:1
position: 2470789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2471226:1
position: 2471226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2488666-2488940:1:exon

position:2488666:1
position: 2488666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2488940:1
position: 2488940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2497534-2497870:1:exon

position:2497534:1
position: 2497534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRK7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GRK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhodopsin kinase GRK7
translation: MVDMGGLDNLIANTAYLQARSTSDGDSREVQRRRRSLALPGPQACAELRRELPVHFHSLCEQQPIGRRLFRDFLATIPTYREATAFLEEVQNWELAEEGPTKSNLLQGLVGICVQSLAPGQPHAFLSPALAAKCQAATTEEEQAALVAQARAETMSFLQEQPFREFLGSPFYEKFLQWKLFEMQPVSEKYFTEFRVLGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKNGEKMALLEKEILEKVNSPFIVSLAYAFESKTHLCLVMSLMNGGDLKFHIYNVGTRGLAMDRVVFYSAQMTCAVLHLHALGIVYRDLKPENVLLDDLGNCRLSDLGLAVQIQDDKPVTQRAGTNGYMAPEILMEKVSYSYPVDWFAMGCSIYEMVAGRTPFKDYKEKISKEDIRQRTLNEDVIFQHDNFTEEAKDICRLFLAKQPEQRLGSREKSDDPRKHPFFQTINFPRLEAGLVDPPFVPDPSVVYAKDIDEIEDFSEVRGVEFDDKDKKFFQRFATGAVPIAWQEEIIETGLFEELNDPNRPTMYGKGNSSRSGVCLLL
SIO_010081: GRK7
subclass of: SO_0000673
so part of: GRK7
location: join(2469629..2470240,2470789..2471226,2488666..2488940,2497534..2497870)
location: region:2469629-2497870:1
so has part: feature:2469629-2470240:1:exon
so has part: feature:2470789-2471226:1:exon
so has part: feature:2488666-2488940:1:exon
so has part: feature:2497534-2497870:1:exon

XP_004599686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2469629-2470240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2470789-2471226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2488666-2488940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2497534-2497870:1:exon

ATP1B3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ATP1B3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2575085..2614367
location: region:2575085-2614367:1
so has part: feature:2575085-2614367:1:exon
subclass of: SO_0000010

101519981
type: Gene
SIO_000068: ncbigene

position:2575085:1
position: 2575085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2614367:1
position: 2614367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2575085-2614367:1:exon

ATP1B3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ATP1B3
product: ATPase Na+/K+ transporting subunit beta 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_036494810.1
SIO_010081: ATP1B3
subclass of: SO_0000673
so part of: ATP1B3
location: join(2575085..2575208,2579690..2579797,2581440..2581444,2593390..2593476,2612582..2612598,2614130..2614367)
location: region:2575085-2614367:1
so has part: feature:2575085-2575208:1:exon
so has part: feature:2579690-2579797:1:exon
so has part: feature:2581440-2581444:1:exon
so has part: feature:2593390-2593476:1:exon
so has part: feature:2612582-2612598:1:exon
so has part: feature:2614130-2614367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2575085-2575208:1:exon

position:2575208:1
position: 2575208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2579690-2579797:1:exon

position:2579690:1
position: 2579690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2579797:1
position: 2579797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2581440-2581444:1:exon

position:2581440:1
position: 2581440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581444:1
position: 2581444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2593390-2593476:1:exon

position:2593390:1
position: 2593390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2593476:1
position: 2593476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2612582-2612598:1:exon

position:2612582:1
position: 2612582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2612598:1
position: 2612598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2614130-2614367:1:exon

position:2614130:1
position: 2614130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP1B3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ATP1B3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit beta-3
translation: MWVMLQTLNDEVPKYRDQIPSPGLTVYPKPLSALEYTFSASDPESYREYVEDLKSFLKHGEENVAAISTYPNNGTIDLKYFPYYGKKLHIGNYKSSRIGCGARRRQAPAAQVAARPGAAQSARVLPRNEEVSVAVPPSAAVAGLRRSCRDAPPRSSPPLPARPSPASPSAHTP
SIO_010081: ATP1B3
subclass of: SO_0000673
so part of: ATP1B3
location: join(2575142..2575208,2579690..2579797,2581440..2581444,2593390..2593476,2612582..2612598,2614130..2614367)
location: region:2575142-2614367:1
so has part: feature:2575142-2575208:1:exon
so has part: feature:2579690-2579797:1:exon
so has part: feature:2581440-2581444:1:exon
so has part: feature:2593390-2593476:1:exon
so has part: feature:2612582-2612598:1:exon
so has part: feature:2614130-2614367:1:exon

XP_036350703.1
type: Protein
SIO_000068: ncbiprotein

position:2575142:1
position: 2575142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2575142-2575208:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2579690-2579797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2581440-2581444:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2593390-2593476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2612582-2612598:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2614130-2614367:1:exon

TFDP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TFDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2653813..2805112)
location: region:2653813-2805112:-1
so has part: feature:2653813-2805112:-1:exon
subclass of: SO_0000010

101520141
type: Gene
SIO_000068: ncbigene

position:2653813:-1
position: 2653813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2805112:-1
position: 2805112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653813-2805112:-1:exon

TFDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TFDP2
product: transcription factor Dp-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930528.1
SIO_010081: TFDP2
subclass of: SO_0000673
so part of: TFDP2
location: complement(join(2653813..2654021,2654204..2654309,2658352..2658556,2664862..2665005,2666555..2666717,2673775..2673822,2675921..2676042,2683254..2683357,2784287..2784353,2805091..2805112))
location: region:2653813-2805112:-1
so has part: feature:2805091-2805112:-1:exon
so has part: feature:2784287-2784353:-1:exon
so has part: feature:2683254-2683357:-1:exon
so has part: feature:2675921-2676042:-1:exon
so has part: feature:2673775-2673822:-1:exon
so has part: feature:2666555-2666717:-1:exon
so has part: feature:2664862-2665005:-1:exon
so has part: feature:2658352-2658556:-1:exon
so has part: feature:2654204-2654309:-1:exon
so has part: feature:2653813-2654021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2805091-2805112:-1:exon

position:2805091:-1
position: 2805091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2784287-2784353:-1:exon

position:2784287:-1
position: 2784287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2784353:-1
position: 2784353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2683254-2683357:-1:exon

position:2683254:-1
position: 2683254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2683357:-1
position: 2683357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2675921-2676042:-1:exon

position:2675921:-1
position: 2675921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2676042:-1
position: 2676042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2673775-2673822:-1:exon

position:2673775:-1
position: 2673775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2673822:-1
position: 2673822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2666555-2666717:-1:exon

position:2666555:-1
position: 2666555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2666717:-1
position: 2666717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2664862-2665005:-1:exon

position:2664862:-1
position: 2664862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2665005:-1
position: 2665005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2658352-2658556:-1:exon

position:2658352:-1
position: 2658352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2658556:-1
position: 2658556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2654204-2654309:-1:exon

position:2654204:-1
position: 2654204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2654309:-1
position: 2654309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2653813-2654021:-1:exon

position:2654021:-1
position: 2654021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TFDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TFDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Dp-2
translation: MTKNVGLISTNAEQRGFVDQNLSPAKGNLSFVAFPVSSTNSPTKILPKTLGPINVNVGPQMIISTPQRLASSGSVLIGHPYTPAPAMVTQTHITEATGWVPSDRKRAREFIDSDFSESKRSKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSDNHWAADSAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWLGLPTNSAQECQNLEQQQPSYRLCSLCRFEYLFNFDNAFEIHDDIEVLKRMGLSFGLESGKCSLEDLKLAKSLVPKALEGYVTDISTGPSWVNRGLLLNSTQSVSTLDLTPGATLPQSSVSQVLCLDAEVALATGQLLGPHSHQSSSAASHCSESRGETPCSFNDDDDEDDEEDSSSPE
SIO_010081: TFDP2
subclass of: SO_0000673
so part of: TFDP2
location: complement(join(2653838..2654021,2654204..2654309,2658352..2658556,2664862..2665005,2666555..2666717,2673775..2673822,2675921..2676042,2683254..2683357,2784287..2784353,2805091..2805102))
location: region:2653838-2805102:-1
so has part: feature:2805091-2805102:-1:exon
so has part: feature:2784287-2784353:-1:exon
so has part: feature:2683254-2683357:-1:exon
so has part: feature:2675921-2676042:-1:exon
so has part: feature:2673775-2673822:-1:exon
so has part: feature:2666555-2666717:-1:exon
so has part: feature:2664862-2665005:-1:exon
so has part: feature:2658352-2658556:-1:exon
so has part: feature:2654204-2654309:-1:exon
so has part: feature:2653838-2654021:-1:exon

XP_012785982.1
type: Protein
SIO_000068: ncbiprotein

position:2653838:-1
position: 2653838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2805102:-1
position: 2805102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2805091-2805102:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2784287-2784353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2683254-2683357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2675921-2676042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2673775-2673822:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2666555-2666717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2664862-2665005:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2658352-2658556:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2654204-2654309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2653838-2654021:-1:exon

LOC118758929
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758929
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2721236..2721342
location: region:2721236-2721342:1
so has part: feature:2721236-2721342:1:exon
subclass of: SO_0000623

118758929
type: Gene
SIO_000068: ncbigene

position:2721236:1
position: 2721236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2721342:1
position: 2721342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2721236-2721342:1:exon

LOC118758929
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758929
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995878.1
SIO_010081: LOC118758929
subclass of: SO_0000673
so part of: LOC118758929
location: 2721236..2721342
location: region:2721236-2721342:1
so has part: feature:2721236-2721342:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2721236-2721342:1:exon

GK5
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: GK5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2849822..2962413)
location: region:2849822-2962413:-1
so has part: feature:2849822-2962413:-1:exon
subclass of: SO_0000010

101519896
type: Gene
SIO_000068: ncbigene

position:2849822:-1
position: 2849822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2962413:-1
position: 2962413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2849822-2962413:-1:exon

GK5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GK5
product: glycerol kinase 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_012930527.1
SIO_010081: GK5
subclass of: SO_0000673
so part of: GK5
location: complement(join(2849822..2849970,2854092..2854225,2855100..2855159,2856277..2856380,2877250..2877344,2892493..2892597,2897169..2897295,2904539..2904599,2904785..2904858,2905028..2905089,2906675..2906750,2908265..2908382,2930494..2930569,2946185..2946278,2962267..2962413))
location: region:2849822-2962413:-1
so has part: feature:2962267-2962413:-1:exon
so has part: feature:2946185-2946278:-1:exon
so has part: feature:2930494-2930569:-1:exon
so has part: feature:2908265-2908382:-1:exon
so has part: feature:2906675-2906750:-1:exon
so has part: feature:2905028-2905089:-1:exon
so has part: feature:2904785-2904858:-1:exon
so has part: feature:2904539-2904599:-1:exon
so has part: feature:2897169-2897295:-1:exon
so has part: feature:2892493-2892597:-1:exon
so has part: feature:2877250-2877344:-1:exon
so has part: feature:2856277-2856380:-1:exon
so has part: feature:2855100-2855159:-1:exon
so has part: feature:2854092-2854225:-1:exon
so has part: feature:2849822-2849970:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2962267-2962413:-1:exon

position:2962267:-1
position: 2962267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2946185-2946278:-1:exon

position:2946185:-1
position: 2946185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2946278:-1
position: 2946278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2930494-2930569:-1:exon

position:2930494:-1
position: 2930494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2930569:-1
position: 2930569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2908265-2908382:-1:exon

position:2908265:-1
position: 2908265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2908382:-1
position: 2908382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2906675-2906750:-1:exon

position:2906675:-1
position: 2906675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2906750:-1
position: 2906750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2905028-2905089:-1:exon

position:2905028:-1
position: 2905028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2905089:-1
position: 2905089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2904785-2904858:-1:exon

position:2904785:-1
position: 2904785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2904858:-1
position: 2904858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2904539-2904599:-1:exon

position:2904539:-1
position: 2904539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2904599:-1
position: 2904599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2897169-2897295:-1:exon

position:2897169:-1
position: 2897169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2897295:-1
position: 2897295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2892493-2892597:-1:exon

position:2892493:-1
position: 2892493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2892597:-1
position: 2892597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2877250-2877344:-1:exon

position:2877250:-1
position: 2877250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2877344:-1
position: 2877344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2856277-2856380:-1:exon

position:2856277:-1
position: 2856277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2856380:-1
position: 2856380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2855100-2855159:-1:exon

position:2855100:-1
position: 2855100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2855159:-1
position: 2855159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2854092-2854225:-1:exon

position:2854092:-1
position: 2854092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2854225:-1
position: 2854225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2849822-2849970:-1:exon

position:2849970:-1
position: 2849970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GK5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GK5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative glycerol kinase 5
translation: MSALPDGPERSASAASRAGFVLGLDVGSSVIRCHVYDRAARIRGSSAQKVESLYPQIGWVEIDPDVLWAQFIAVIKDSVKAAGIQMNQIVGLGISTQRATFITWNKMRRAGLGEGVPPGNYGYTGSGYSACEEDKERLSESLRSKVQKAAEEGNCCFGTIDTWLLHKLTNGSEYATDFSNASTTGLFDPYKMCWSGLITSLVSIPLSLLPPVKDTSHHFGSVDKEIFGVPIPIVALVGDQQSAMFGECCFRTGDVKLTMGTGTFLDINTGNNLQHTMGGFYPLIGWKIGQEVVCLAESNAGDTGTAIKWAQQLNLFTDAAETEKMAKSLKDSEGVYFVPSFNGLQAPLNDPCACASFMGLKPSTNKYHLVRAILESIAFRNKQLYETMQKEIHIPVTKIRADGGVCKNDFVMQMTSDLINENIERPDHSDISCLGAASLAGLAVGFWTDKEELEKLRQSEMVFKPQKKWQEYEMSMENWLRAVRRSMNWYNST
SIO_010081: GK5
subclass of: SO_0000673
so part of: GK5
location: complement(join(2849822..2849970,2854092..2854225,2855100..2855159,2856277..2856380,2877250..2877344,2892493..2892597,2897169..2897295,2904539..2904599,2904785..2904858,2905028..2905089,2906675..2906750,2908265..2908382,2930494..2930569,2946185..2946278,2962267..2962413))
location: region:2849822-2962413:-1
so has part: feature:2962267-2962413:-1:exon
so has part: feature:2946185-2946278:-1:exon
so has part: feature:2930494-2930569:-1:exon
so has part: feature:2908265-2908382:-1:exon
so has part: feature:2906675-2906750:-1:exon
so has part: feature:2905028-2905089:-1:exon
so has part: feature:2904785-2904858:-1:exon
so has part: feature:2904539-2904599:-1:exon
so has part: feature:2897169-2897295:-1:exon
so has part: feature:2892493-2892597:-1:exon
so has part: feature:2877250-2877344:-1:exon
so has part: feature:2856277-2856380:-1:exon
so has part: feature:2855100-2855159:-1:exon
so has part: feature:2854092-2854225:-1:exon
so has part: feature:2849822-2849970:-1:exon

XP_012785981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2962267-2962413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2946185-2946278:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2930494-2930569:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2908265-2908382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2906675-2906750:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2905028-2905089:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2904785-2904858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2904539-2904599:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2897169-2897295:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2892493-2892597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2877250-2877344:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2856277-2856380:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2855100-2855159:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2854092-2854225:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2849822-2849970:-1:exon

LOC101517203
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101517203
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2908033..2908381)
location: region:2908033-2908381:-1
so has part: feature:2908033-2908381:-1:exon

101517203
type: Gene
SIO_000068: ncbigene

position:2908033:-1
position: 2908033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2908381:-1
position: 2908381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2908033-2908381:-1:exon

LOC101517203
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101517203
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC101517203
subclass of: SO_0000673
so part of: LOC101517203
location: complement(2908033..2908381)
location: region:2908033-2908381:-1
so has part: feature:2908033-2908381:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2908033-2908381:-1:exon

XRN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: XRN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3016852..3167428)
location: region:3016852-3167428:-1
so has part: feature:3016852-3167428:-1:exon
subclass of: SO_0000010

101519646
type: Gene
SIO_000068: ncbigene

position:3016852:-1
position: 3016852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3167428:-1
position: 3167428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3016852-3167428:-1:exon

XRN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: XRN1
product: 5'-3' exoribonuclease 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930526.1
SIO_010081: XRN1
subclass of: SO_0000673
so part of: XRN1
location: complement(join(3016852..3017367,3017789..3017946,3026420..3026516,3026605..3026718,3027686..3027867,3032205..3032364,3032734..3032856,3033001..3033111,3036183..3036244,3041452..3041557,3044091..3044186,3045680..3045887,3048792..3048861,3051274..3051406,3051499..3051555,3068792..3068927,3069295..3069384,3071038..3071184,3071688..3071803,3074483..3074581,3077577..3077690,3079242..3079404,3081931..3082062,3083946..3084049,3087266..3087364,3087457..3087577,3088287..3088456,3098303..3098422,3100501..3100657,3121472..3121561,3123869..3123974,3130601..3130715,3130816..3130925,3149015..3149117,3167354..3167428))
location: region:3016852-3167428:-1
so has part: feature:3167354-3167428:-1:exon
so has part: feature:3149015-3149117:-1:exon
so has part: feature:3130816-3130925:-1:exon
so has part: feature:3130601-3130715:-1:exon
so has part: feature:3123869-3123974:-1:exon
so has part: feature:3121472-3121561:-1:exon
so has part: feature:3100501-3100657:-1:exon
so has part: feature:3098303-3098422:-1:exon
so has part: feature:3088287-3088456:-1:exon
so has part: feature:3087457-3087577:-1:exon
so has part: feature:3087266-3087364:-1:exon
so has part: feature:3083946-3084049:-1:exon
so has part: feature:3081931-3082062:-1:exon
so has part: feature:3079242-3079404:-1:exon
so has part: feature:3077577-3077690:-1:exon
so has part: feature:3074483-3074581:-1:exon
so has part: feature:3071688-3071803:-1:exon
so has part: feature:3071038-3071184:-1:exon
so has part: feature:3069295-3069384:-1:exon
so has part: feature:3068792-3068927:-1:exon
so has part: feature:3051499-3051555:-1:exon
so has part: feature:3051274-3051406:-1:exon
so has part: feature:3048792-3048861:-1:exon
so has part: feature:3045680-3045887:-1:exon
so has part: feature:3044091-3044186:-1:exon
so has part: feature:3041452-3041557:-1:exon
so has part: feature:3036183-3036244:-1:exon
so has part: feature:3033001-3033111:-1:exon
so has part: feature:3032734-3032856:-1:exon
so has part: feature:3032205-3032364:-1:exon
so has part: feature:3027686-3027867:-1:exon
so has part: feature:3026605-3026718:-1:exon
so has part: feature:3026420-3026516:-1:exon
so has part: feature:3017789-3017946:-1:exon
so has part: feature:3016852-3017367:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3167354-3167428:-1:exon

position:3167354:-1
position: 3167354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3149015-3149117:-1:exon

position:3149015:-1
position: 3149015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3149117:-1
position: 3149117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3130816-3130925:-1:exon

position:3130816:-1
position: 3130816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3130925:-1
position: 3130925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3130601-3130715:-1:exon

position:3130601:-1
position: 3130601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3130715:-1
position: 3130715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3123869-3123974:-1:exon

position:3123869:-1
position: 3123869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3123974:-1
position: 3123974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3121472-3121561:-1:exon

position:3121472:-1
position: 3121472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3121561:-1
position: 3121561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3100501-3100657:-1:exon

position:3100501:-1
position: 3100501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3100657:-1
position: 3100657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3098303-3098422:-1:exon

position:3098303:-1
position: 3098303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3098422:-1
position: 3098422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3088287-3088456:-1:exon

position:3088287:-1
position: 3088287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3088456:-1
position: 3088456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3087457-3087577:-1:exon

position:3087457:-1
position: 3087457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3087577:-1
position: 3087577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3087266-3087364:-1:exon

position:3087266:-1
position: 3087266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3087364:-1
position: 3087364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3083946-3084049:-1:exon

position:3083946:-1
position: 3083946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3084049:-1
position: 3084049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3081931-3082062:-1:exon

position:3081931:-1
position: 3081931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3082062:-1
position: 3082062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3079242-3079404:-1:exon

position:3079242:-1
position: 3079242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3079404:-1
position: 3079404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3077577-3077690:-1:exon

position:3077577:-1
position: 3077577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3077690:-1
position: 3077690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3074483-3074581:-1:exon

position:3074483:-1
position: 3074483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3074581:-1
position: 3074581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3071688-3071803:-1:exon

position:3071688:-1
position: 3071688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3071803:-1
position: 3071803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3071038-3071184:-1:exon

position:3071038:-1
position: 3071038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3071184:-1
position: 3071184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3069295-3069384:-1:exon

position:3069295:-1
position: 3069295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3069384:-1
position: 3069384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3068792-3068927:-1:exon

position:3068792:-1
position: 3068792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3068927:-1
position: 3068927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3051499-3051555:-1:exon

position:3051499:-1
position: 3051499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3051555:-1
position: 3051555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3051274-3051406:-1:exon

position:3051274:-1
position: 3051274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3051406:-1
position: 3051406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3048792-3048861:-1:exon

position:3048792:-1
position: 3048792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3048861:-1
position: 3048861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3045680-3045887:-1:exon

position:3045680:-1
position: 3045680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3045887:-1
position: 3045887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3044091-3044186:-1:exon

position:3044091:-1
position: 3044091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3044186:-1
position: 3044186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3041452-3041557:-1:exon

position:3041452:-1
position: 3041452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3041557:-1
position: 3041557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3036183-3036244:-1:exon

position:3036183:-1
position: 3036183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3036244:-1
position: 3036244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3033001-3033111:-1:exon

position:3033001:-1
position: 3033001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3033111:-1
position: 3033111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3032734-3032856:-1:exon

position:3032734:-1
position: 3032734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3032856:-1
position: 3032856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3032205-3032364:-1:exon

position:3032205:-1
position: 3032205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3032364:-1
position: 3032364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3027686-3027867:-1:exon

position:3027686:-1
position: 3027686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3027867:-1
position: 3027867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3026605-3026718:-1:exon

position:3026605:-1
position: 3026605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3026718:-1
position: 3026718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3026420-3026516:-1:exon

position:3026420:-1
position: 3026420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3026516:-1
position: 3026516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3017789-3017946:-1:exon

position:3017789:-1
position: 3017789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3017946:-1
position: 3017946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:3016852-3017367:-1:exon

position:3017367:-1
position: 3017367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

XRN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: XRN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-3' exoribonuclease 1
translation: MGVPKFYRWISERYPCLSEVVKEHQLRSAKEAEEKIKKAIEKGETLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLVDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISSLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTSENSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEERKRNQHSECLMCWYDRETEFTYPSPWPEKFPAIERCSARYKIISLDAWRVDINKNKITRTDQKALYFCGFPSLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILMDTESDELRIENIAASVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYLGRTAPPSKVVHLGDKEQSTWAKDVQGISEQYLRRKGIIINETSAVVYAQLLTGRKYQISQNGDVRLEKQWSKQVLPFVYQTVVKDIRAFDSRFSGIKTLDDLFPPGSMVFMLGTPYYGCTGEVQDSSDVITEGRIRVVFSIPYEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKKVGSEWMYSSAAEQLLAEYLERAPELFIYIAKNSQEDVFYEDDIWPGENENGAEKVQEITTWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPSSALVNLSHGSRPETGNQKLTAIVKPQPAVNHYSSNSLVSSGHLGGLNHSPQSLFVPTQVPVKDDDEFCNIWQSLQASGKPQHFQPPAQEKGAVLPQEINQVTQQHKSGLSDNSIKYQQRKDPHRKFKEECKSPKVEYQSQKMLNKQTSGGPAKCNIKLLKRNESPEVSETQKVVTGGPNAVDKPNPGIENALASLNISKESAEAPCPPGEPPDEAHLSPQSFAMKGTKMLKEILKIDGSDTGDSKNEMKKSGSEVTVSSNRNDAYGLSSQAKQNKKLPSYMQKPHSANEYHHVQSLDSVCWPAASQVPPVPTPVSELCRICSLVGMPQPDFSFLRTPQTMTVCQVKLSNGLLVHGPQCHSENEAKEKAALFALQQLGPLVNFPLSPPIYPNYPPAVAPGTIPVFPQPAAHLMPPSHVFGSMPWGPPVPVPGKAFHHQSYSGPVPVAGGMPGGVHNQFIPLQVTKKRIANKKNFENKEAQSASQATPLQTSQPGPSHGPEGSPQESSPASLRPPEITQPAPAQAEAAPQGRGVSHKSTPSSSRRKSRKLAVNFGISKSSE
SIO_010081: XRN1
subclass of: SO_0000673
so part of: XRN1
location: complement(join(3017071..3017367,3017789..3017946,3026420..3026516,3026605..3026718,3027686..3027867,3032205..3032364,3032734..3032856,3033001..3033111,3036183..3036244,3041452..3041557,3044091..3044186,3045680..3045887,3048792..3048861,3051274..3051406,3051499..3051555,3068792..3068927,3069295..3069384,3071038..3071184,3071688..3071803,3074483..3074581,3077577..3077690,3079242..3079404,3081931..3082062,3083946..3084049,3087266..3087364,3087457..3087577,3088287..3088456,3098303..3098422,3100501..3100657,3121472..3121561,3123869..3123974,3130601..3130715,3130816..3130925,3149015..3149117,3167354..3167428))
location: region:3017071-3167428:-1
so has part: feature:3167354-3167428:-1:exon
so has part: feature:3149015-3149117:-1:exon
so has part: feature:3130816-3130925:-1:exon
so has part: feature:3130601-3130715:-1:exon
so has part: feature:3123869-3123974:-1:exon
so has part: feature:3121472-3121561:-1:exon
so has part: feature:3100501-3100657:-1:exon
so has part: feature:3098303-3098422:-1:exon
so has part: feature:3088287-3088456:-1:exon
so has part: feature:3087457-3087577:-1:exon
so has part: feature:3087266-3087364:-1:exon
so has part: feature:3083946-3084049:-1:exon
so has part: feature:3081931-3082062:-1:exon
so has part: feature:3079242-3079404:-1:exon
so has part: feature:3077577-3077690:-1:exon
so has part: feature:3074483-3074581:-1:exon
so has part: feature:3071688-3071803:-1:exon
so has part: feature:3071038-3071184:-1:exon
so has part: feature:3069295-3069384:-1:exon
so has part: feature:3068792-3068927:-1:exon
so has part: feature:3051499-3051555:-1:exon
so has part: feature:3051274-3051406:-1:exon
so has part: feature:3048792-3048861:-1:exon
so has part: feature:3045680-3045887:-1:exon
so has part: feature:3044091-3044186:-1:exon
so has part: feature:3041452-3041557:-1:exon
so has part: feature:3036183-3036244:-1:exon
so has part: feature:3033001-3033111:-1:exon
so has part: feature:3032734-3032856:-1:exon
so has part: feature:3032205-3032364:-1:exon
so has part: feature:3027686-3027867:-1:exon
so has part: feature:3026605-3026718:-1:exon
so has part: feature:3026420-3026516:-1:exon
so has part: feature:3017789-3017946:-1:exon
so has part: feature:3017071-3017367:-1:exon

XP_012785980.1
type: Protein
SIO_000068: ncbiprotein

position:3017071:-1
position: 3017071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3167354-3167428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3149015-3149117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3130816-3130925:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3130601-3130715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3123869-3123974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3121472-3121561:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3100501-3100657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3098303-3098422:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3088287-3088456:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3087457-3087577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3087266-3087364:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3083946-3084049:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3081931-3082062:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3079242-3079404:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3077577-3077690:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3074483-3074581:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3071688-3071803:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3071038-3071184:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3069295-3069384:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3068792-3068927:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3051499-3051555:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3051274-3051406:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3048792-3048861:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3045680-3045887:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3044091-3044186:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3041452-3041557:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3036183-3036244:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3033001-3033111:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3032734-3032856:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3032205-3032364:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3027686-3027867:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3026605-3026718:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3026420-3026516:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3017789-3017946:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3017071-3017367:-1:exon

ATR
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ATR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3168643..3287274)
location: region:3168643-3287274:-1
so has part: feature:3168643-3287274:-1:exon
subclass of: SO_0000010

101519401
type: Gene
SIO_000068: ncbigene

position:3168643:-1
position: 3168643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3287274:-1
position: 3287274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3168643-3287274:-1:exon

ATR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ATR
product: ATR serine/threonine kinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597768.3
SIO_010081: ATR
subclass of: SO_0000673
so part of: ATR
location: complement(join(3168643..3169009,3170708..3170813,3177205..3177356,3178877..3179030,3179148..3179304,3183399..3183549,3184292..3184435,3186071..3186271,3188731..3188865,3190059..3190291,3190737..3190834,3202340..3202350,3203405..3203581,3207492..3207651,3208029..3208208,3209942..3210119,3210348..3210439,3212352..3212443,3213225..3213389,3214230..3214408,3217445..3217655,3219275..3219412,3221950..3222070,3232012..3232127,3238730..3238843,3243948..3244154,3245420..3245545,3246764..3246857,3248570..3248713,3252283..3252413,3255404..3255496,3258378..3258563,3260662..3260856,3263722..3263892,3264547..3264718,3264879..3264979,3265078..3265268,3267708..3267970,3268294..3268486,3269463..3269615,3270110..3270300,3272348..3272539,3273040..3273218,3273850..3274727,3277396..3277545,3282145..3282236,3287190..3287274))
location: region:3168643-3287274:-1
so has part: feature:3287190-3287274:-1:exon
so has part: feature:3282145-3282236:-1:exon
so has part: feature:3277396-3277545:-1:exon
so has part: feature:3273850-3274727:-1:exon
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so has part: feature:3272348-3272539:-1:exon
so has part: feature:3270110-3270300:-1:exon
so has part: feature:3269463-3269615:-1:exon
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so has part: feature:3267708-3267970:-1:exon
so has part: feature:3265078-3265268:-1:exon
so has part: feature:3264879-3264979:-1:exon
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so has part: feature:3263722-3263892:-1:exon
so has part: feature:3260662-3260856:-1:exon
so has part: feature:3258378-3258563:-1:exon
so has part: feature:3255404-3255496:-1:exon
so has part: feature:3252283-3252413:-1:exon
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so has part: feature:3246764-3246857:-1:exon
so has part: feature:3245420-3245545:-1:exon
so has part: feature:3243948-3244154:-1:exon
so has part: feature:3238730-3238843:-1:exon
so has part: feature:3232012-3232127:-1:exon
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so has part: feature:3214230-3214408:-1:exon
so has part: feature:3213225-3213389:-1:exon
so has part: feature:3212352-3212443:-1:exon
so has part: feature:3210348-3210439:-1:exon
so has part: feature:3209942-3210119:-1:exon
so has part: feature:3208029-3208208:-1:exon
so has part: feature:3207492-3207651:-1:exon
so has part: feature:3203405-3203581:-1:exon
so has part: feature:3202340-3202350:-1:exon
so has part: feature:3190737-3190834:-1:exon
so has part: feature:3190059-3190291:-1:exon
so has part: feature:3188731-3188865:-1:exon
so has part: feature:3186071-3186271:-1:exon
so has part: feature:3184292-3184435:-1:exon
so has part: feature:3183399-3183549:-1:exon
so has part: feature:3179148-3179304:-1:exon
so has part: feature:3178877-3179030:-1:exon
so has part: feature:3177205-3177356:-1:exon
so has part: feature:3170708-3170813:-1:exon
so has part: feature:3168643-3169009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3287190-3287274:-1:exon

position:3287190:-1
position: 3287190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3282145-3282236:-1:exon

position:3282145:-1
position: 3282145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3282236:-1
position: 3282236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3277396-3277545:-1:exon

position:3277396:-1
position: 3277396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3277545:-1
position: 3277545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3273850-3274727:-1:exon

position:3273850:-1
position: 3273850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3274727:-1
position: 3274727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3273040-3273218:-1:exon

position:3273040:-1
position: 3273040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3273218:-1
position: 3273218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3272348-3272539:-1:exon

position:3272348:-1
position: 3272348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272539:-1
position: 3272539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3270110-3270300:-1:exon

position:3270110:-1
position: 3270110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3270300:-1
position: 3270300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3269463-3269615:-1:exon

position:3269463:-1
position: 3269463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3269615:-1
position: 3269615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3268294-3268486:-1:exon

position:3268294:-1
position: 3268294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3268486:-1
position: 3268486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3267708-3267970:-1:exon

position:3267708:-1
position: 3267708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3267970:-1
position: 3267970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3265078-3265268:-1:exon

position:3265078:-1
position: 3265078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3265268:-1
position: 3265268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3264879-3264979:-1:exon

position:3264879:-1
position: 3264879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3264979:-1
position: 3264979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3264547-3264718:-1:exon

position:3264547:-1
position: 3264547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3264718:-1
position: 3264718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3263722-3263892:-1:exon

position:3263722:-1
position: 3263722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263892:-1
position: 3263892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3260662-3260856:-1:exon

position:3260662:-1
position: 3260662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3260856:-1
position: 3260856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3258378-3258563:-1:exon

position:3258378:-1
position: 3258378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3258563:-1
position: 3258563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3255404-3255496:-1:exon

position:3255404:-1
position: 3255404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3255496:-1
position: 3255496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3252283-3252413:-1:exon

position:3252283:-1
position: 3252283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3252413:-1
position: 3252413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3248570-3248713:-1:exon

position:3248570:-1
position: 3248570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3248713:-1
position: 3248713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3246764-3246857:-1:exon

position:3246764:-1
position: 3246764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3246857:-1
position: 3246857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3245420-3245545:-1:exon

position:3245420:-1
position: 3245420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3245545:-1
position: 3245545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3243948-3244154:-1:exon

position:3243948:-1
position: 3243948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3244154:-1
position: 3244154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3238730-3238843:-1:exon

position:3238730:-1
position: 3238730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3238843:-1
position: 3238843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3232012-3232127:-1:exon

position:3232012:-1
position: 3232012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3232127:-1
position: 3232127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3221950-3222070:-1:exon

position:3221950:-1
position: 3221950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3222070:-1
position: 3222070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3219275-3219412:-1:exon

position:3219275:-1
position: 3219275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3219412:-1
position: 3219412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3217445-3217655:-1:exon

position:3217445:-1
position: 3217445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3217655:-1
position: 3217655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3214230-3214408:-1:exon

position:3214230:-1
position: 3214230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3214408:-1
position: 3214408
reference: sequence
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urn:…
SIO_000300: 29
SIO_000628: feature:3213225-3213389:-1:exon

position:3213225:-1
position: 3213225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3213389:-1
position: 3213389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3212352-3212443:-1:exon

position:3212352:-1
position: 3212352
reference: sequence
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type: ExactPosition

position:3212443:-1
position: 3212443
reference: sequence
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urn:…
SIO_000300: 31
SIO_000628: feature:3210348-3210439:-1:exon

position:3210348:-1
position: 3210348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3210439:-1
position: 3210439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3209942-3210119:-1:exon

position:3209942:-1
position: 3209942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3210119:-1
position: 3210119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3208029-3208208:-1:exon

position:3208029:-1
position: 3208029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3208208:-1
position: 3208208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3207492-3207651:-1:exon

position:3207492:-1
position: 3207492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3207651:-1
position: 3207651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:3203405-3203581:-1:exon

position:3203405:-1
position: 3203405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3203581:-1
position: 3203581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:3202340-3202350:-1:exon

position:3202340:-1
position: 3202340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3202350:-1
position: 3202350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:3190737-3190834:-1:exon

position:3190737:-1
position: 3190737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3190834:-1
position: 3190834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:3190059-3190291:-1:exon

position:3190059:-1
position: 3190059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3190291:-1
position: 3190291
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 39
SIO_000628: feature:3188731-3188865:-1:exon

position:3188731:-1
position: 3188731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3188865:-1
position: 3188865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:3186071-3186271:-1:exon

position:3186071:-1
position: 3186071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3186271:-1
position: 3186271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:3184292-3184435:-1:exon

position:3184292:-1
position: 3184292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3184435:-1
position: 3184435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:3183399-3183549:-1:exon

position:3183399:-1
position: 3183399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3183549:-1
position: 3183549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:3179148-3179304:-1:exon

position:3179148:-1
position: 3179148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3179304:-1
position: 3179304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:3178877-3179030:-1:exon

position:3178877:-1
position: 3178877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3179030:-1
position: 3179030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:3177205-3177356:-1:exon

position:3177205:-1
position: 3177205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3177356:-1
position: 3177356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:3170708-3170813:-1:exon

position:3170708:-1
position: 3170708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3170813:-1
position: 3170813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:3168643-3169009:-1:exon

position:3169009:-1
position: 3169009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ATR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase ATR
translation: MAEHGLELASMIPALRELGSATPEEYNTVVQKPRQILCQFIDRILTDVNVVAVELIKKTDSQPTSVMLLDFIQHIMKSSPLMFVNVNGSHGQNETKGNCIEFSNWIITRLLRIAATPSCHMLHKKICEVICSLLFLFKSKSPAIFGVLTKEFLQLFEDVICLHRKHAMGHVVEWPVVVSHFLSQLDERMEYLQPAPLQFMSMQNLEFIEATLLMVLTRIVAIVFFRRQELLLWRIGCVLLEYGSPKIKSLAISLLTELFELGGLPAQPASSFFSSLLELLKRLVEMDPDQLKLYEKPLSKLLKTLFPFDADAYRNIEPVYLNMLLEKLCVMFEDGVLMRLKSDLLKAALCHLLQYFLRFVPAGYETASQVRKVYVSSICRALVDVLGVQVDAEYLLGPLYAALKIESMEVFEEIQCQTPEEDLSNDAHGVSPKRRRLSSSLSSSKRIPQETEEVRLVDMSKKSILWSALKQKAEFLQVSLEYNDARNPVLETLEGLTVALQLTALCTVHCSHQNIDCQNFKDHQHNCKKKASVVITWMPFEFYAKVLKSCRSLLESVQNPDLGAVIDKVVRIYDALIYMQVRSSFEEHILKDLCAMLSIPWIYPHAAEGSLKLTTFATDLVALSERILDSYSPQAQSRCVFLLTLFPRRISLEWRTAVYNWALQSSHEVIRASCVNGFFILLQEQNSYNRIPKILIDKVKDDSDIVKTEFASILGQLICSLHGDFYLTSSLTEPFSEHGHMDLFCKNLRAASQQECCSSRLKASVCKPLLFLLQKEVPSPVKLAFLDNLQHLCKHLDFREDETDVRAVLGTLLNLMEDPNKDVRVAFSGNIKYILECLNSEDGFIKELFVLRMKEAYTQAQISRNNELKDTLILTTGDIGRAAQGDLVPFALLHLLHCLLSKSASVSGAAYTEIRALVAAKSLKLQNFFSQYKKPICQFLVESLHSSQMTALPNTPCQNAEMRKQDVAHQREMALNTLSEVANVFDFPDLNRFLTRTLQVLLPDLAAKASPAASAIIRTLGKQLNVNRREILINNFKYIFSHLVCSCSKDELERALHYLKNETEIELGSLLRQDFQGLHNELLLRIGEHYQQVFNGLSILASFASSDDPYQGPRDITSPELMADYLQPKLLGILAFFNMQLLSSSVGIEDKKMALNSLMSLMKLMGPKHVSSVRVKMMTTLRTGLRFKDDFPELCCRAWDCFVHCLDHAYLGPLLSHVIVALLPLIHIQPKETAAIFHYLIIENRDAVQDFLHEIYFLPDHPELKKIKAVLQEYRKETSASTDLQTTLQLSMKAVQHENVDVRIHALTSLKETLYKNQEKLIKYATDSETVEPVISQLVTVLLKGCQDANPQARLLCGECLGELGAIDPGRLDFSATETQGKDFTFVTDVEDPNFAYGLLIELTRAYLAYADNSRAQDSAAYAIQELLSIYECREMQTDGPGHQLWRRFPEHVREILEPHLNTRYKSSQKSTDWSEVKKPIYLSKLGNNFAEWSASWAGYLITKVRDELASKIFTCCSIMMKHDFKVTIYLLPHILVYVLLGCTEEDQQEVYAEIMAVLKHDDQHSISTQDSASDLCQLSTQTVFSMLDHLAQWARHKFQEMNADKCLQSKSDSDTGESVGSSVGYEDYKSVTHFLDLIPQDTLAVASFRSKAYTRAVMHFESFITQKKQNIQEHLGFLQKLYAAMDEPDGVAGVSAIRKAEPSLKEQILEHESLGLLRDATACYDRAIQLEPDQIIHYHGVVKSMLGLGQLSTVITQVNGVHANRSEWTDELNRYRVEAAWKLSQWDLVENYLAEDGKSTSWSVRLGQLLLSAKKKDTTAFYDTLKLVRTEQIVPLSAASFERGSYQRGYEFIVRLHMLCELEHSLKPLFQQSPGDSFQEDSLNWVARLEMTQNSYRAKEPILALRRALLSLNKRPDYNEMVGECWLQSARVARKAGHHQTAYNALLNAGESRLAELYVERAKWLWSKGDVHQALIVLQKGVELCFPENTTTESKNTLI…
SIO_010081: ATR
subclass of: SO_0000673
so part of: ATR
location: complement(join(3168836..3169009,3170708..3170813,3177205..3177356,3178877..3179030,3179148..3179304,3183399..3183549,3184292..3184435,3186071..3186271,3188731..3188865,3190059..3190291,3190737..3190834,3202340..3202350,3203405..3203581,3207492..3207651,3208029..3208208,3209942..3210119,3210348..3210439,3212352..3212443,3213225..3213389,3214230..3214408,3217445..3217655,3219275..3219412,3221950..3222070,3232012..3232127,3238730..3238843,3243948..3244154,3245420..3245545,3246764..3246857,3248570..3248713,3252283..3252413,3255404..3255496,3258378..3258563,3260662..3260856,3263722..3263892,3264547..3264718,3264879..3264979,3265078..3265268,3267708..3267970,3268294..3268486,3269463..3269615,3270110..3270300,3272348..3272539,3273040..3273218,3273850..3274727,3277396..3277545,3282145..3282236,3287190..3287248))
location: region:3168836-3287248:-1
so has part: feature:3287190-3287248:-1:exon
so has part: feature:3282145-3282236:-1:exon
so has part: feature:3277396-3277545:-1:exon
so has part: feature:3273850-3274727:-1:exon
so has part: feature:3273040-3273218:-1:exon
so has part: feature:3272348-3272539:-1:exon
so has part: feature:3270110-3270300:-1:exon
so has part: feature:3269463-3269615:-1:exon
so has part: feature:3268294-3268486:-1:exon
so has part: feature:3267708-3267970:-1:exon
so has part: feature:3265078-3265268:-1:exon
so has part: feature:3264879-3264979:-1:exon
so has part: feature:3264547-3264718:-1:exon
so has part: feature:3263722-3263892:-1:exon
so has part: feature:3260662-3260856:-1:exon
so has part: feature:3258378-3258563:-1:exon
so has part: feature:3255404-3255496:-1:exon
so has part: feature:3252283-3252413:-1:exon
so has part: feature:3248570-3248713:-1:exon
so has part: feature:3246764-3246857:-1:exon
so has part: feature:3245420-3245545:-1:exon
so has part: feature:3243948-3244154:-1:exon
so has part: feature:3238730-3238843:-1:exon
so has part: feature:3232012-3232127:-1:exon
so has part: feature:3221950-3222070:-1:exon
so has part: feature:3219275-3219412:-1:exon
so has part: feature:3217445-3217655:-1:exon
so has part: feature:3214230-3214408:-1:exon
so has part: feature:3213225-3213389:-1:exon
so has part: feature:3212352-3212443:-1:exon
so has part: feature:3210348-3210439:-1:exon
so has part: feature:3209942-3210119:-1:exon
so has part: feature:3208029-3208208:-1:exon
so has part: feature:3207492-3207651:-1:exon
so has part: feature:3203405-3203581:-1:exon
so has part: feature:3202340-3202350:-1:exon
so has part: feature:3190737-3190834:-1:exon
so has part: feature:3190059-3190291:-1:exon
so has part: feature:3188731-3188865:-1:exon
so has part: feature:3186071-3186271:-1:exon
so has part: feature:3184292-3184435:-1:exon
so has part: feature:3183399-3183549:-1:exon
so has part: feature:3179148-3179304:-1:exon
so has part: feature:3178877-3179030:-1:exon
so has part: feature:3177205-3177356:-1:exon
so has part: feature:3170708-3170813:-1:exon
so has part: feature:3168836-3169009:-1:exon

XP_004597825.1
type: Protein
SIO_000068: ncbiprotein

position:3168836:-1
position: 3168836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3287248:-1
position: 3287248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3287190-3287248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3282145-3282236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3277396-3277545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3273850-3274727:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3273040-3273218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3272348-3272539:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3270110-3270300:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3269463-3269615:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3268294-3268486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3267708-3267970:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3265078-3265268:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3264879-3264979:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3264547-3264718:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3263722-3263892:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3260662-3260856:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3258378-3258563:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3255404-3255496:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3252283-3252413:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3248570-3248713:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3246764-3246857:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3245420-3245545:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3243948-3244154:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3238730-3238843:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3232012-3232127:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3221950-3222070:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3219275-3219412:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3217445-3217655:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3214230-3214408:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3213225-3213389:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3212352-3212443:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3210348-3210439:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3209942-3210119:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3208029-3208208:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3207492-3207651:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3203405-3203581:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:3202340-3202350:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:3190737-3190834:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:3190059-3190291:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:3188731-3188865:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:3186071-3186271:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:3184292-3184435:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:3183399-3183549:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:3179148-3179304:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:3178877-3179030:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:3177205-3177356:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:3170708-3170813:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:3168836-3169009:-1:exon

LOC101516956
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101516956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3363060..3363215)
location: region:3363060-3363215:-1
so has part: feature:3363060-3363215:-1:exon
subclass of: SO_0000010

101516956
type: Gene
SIO_000068: ncbigene

position:3363060:-1
position: 3363060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3363215:-1
position: 3363215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3363060-3363215:-1:exon

LOC101516956
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101516956
product: mitochondrial import receptor subunit TOM5 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_036494938.1
SIO_010081: LOC101516956
subclass of: SO_0000673
so part of: LOC101516956
location: complement(3363060..3363215)
location: region:3363060-3363215:-1
so has part: feature:3363060-3363215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3363060-3363215:-1:exon

LOC101516956
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101516956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import receptor subunit TOM5 homolog
translation: MFPMEGLVRKLDPDEGKRGICDDVLSSIRNFLTYVALRQVTPFILKKLSSI
SIO_010081: LOC101516956
subclass of: SO_0000673
so part of: LOC101516956
location: complement(3363060..3363215)
location: region:3363060-3363215:-1
so has part: feature:3363060-3363215:-1:exon

XP_036350831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3363060-3363215:-1:exon

PLS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3392935..3442310
location: region:3392935-3442310:1
so has part: feature:3392935-3442310:1:exon
subclass of: SO_0000010

101516707
type: Gene
SIO_000068: ncbigene

position:3392935:1
position: 3392935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3442310:1
position: 3442310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3392935-3442310:1:exon

PLS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PLS1
product: plastin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036494801.1
SIO_010081: PLS1
subclass of: SO_0000673
so part of: PLS1
location: join(3392935..3393066,3395943..3396043,3401488..3401651,3404054..3404183,3408595..3408714,3410505..3410599,3416352..3416517,3416602..3416744,3417939..3418034,3420267..3420462,3425152..3425230,3428259..3428373,3434676..3434809,3435257..3435380,3441834..3441958,3442175..3442310)
location: region:3392935-3442310:1
so has part: feature:3392935-3393066:1:exon
so has part: feature:3395943-3396043:1:exon
so has part: feature:3401488-3401651:1:exon
so has part: feature:3404054-3404183:1:exon
so has part: feature:3408595-3408714:1:exon
so has part: feature:3410505-3410599:1:exon
so has part: feature:3416352-3416517:1:exon
so has part: feature:3416602-3416744:1:exon
so has part: feature:3417939-3418034:1:exon
so has part: feature:3420267-3420462:1:exon
so has part: feature:3425152-3425230:1:exon
so has part: feature:3428259-3428373:1:exon
so has part: feature:3434676-3434809:1:exon
so has part: feature:3435257-3435380:1:exon
so has part: feature:3441834-3441958:1:exon
so has part: feature:3442175-3442310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3392935-3393066:1:exon

position:3393066:1
position: 3393066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3395943-3396043:1:exon

position:3395943:1
position: 3395943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3396043:1
position: 3396043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3401488-3401651:1:exon

position:3401488:1
position: 3401488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3401651:1
position: 3401651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3404054-3404183:1:exon

position:3404054:1
position: 3404054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3404183:1
position: 3404183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3408595-3408714:1:exon

position:3408595:1
position: 3408595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3408714:1
position: 3408714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3410505-3410599:1:exon

position:3410505:1
position: 3410505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3410599:1
position: 3410599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3416352-3416517:1:exon

position:3416352:1
position: 3416352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3416517:1
position: 3416517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3416602-3416744:1:exon

position:3416602:1
position: 3416602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3416744:1
position: 3416744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3417939-3418034:1:exon

position:3417939:1
position: 3417939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3418034:1
position: 3418034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3420267-3420462:1:exon

position:3420267:1
position: 3420267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3420462:1
position: 3420462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3425152-3425230:1:exon

position:3425152:1
position: 3425152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3425230:1
position: 3425230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3428259-3428373:1:exon

position:3428259:1
position: 3428259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3428373:1
position: 3428373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3434676-3434809:1:exon

position:3434676:1
position: 3434676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3434809:1
position: 3434809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3435257-3435380:1:exon

position:3435257:1
position: 3435257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3435380:1
position: 3435380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3441834-3441958:1:exon

position:3441834:1
position: 3441834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3441958:1
position: 3441958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3442175-3442310:1:exon

position:3442175:1
position: 3442175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plastin-1
translation: MSKFARRGICIKNPARPALWSKGVTVSYPKMENSTTTISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEKILAVADNNKDGKISFEEFVSLMQELKSKDISKTFRKIINKREGITAIGGTSSISSEGTQHSYSEEEKVAFVNWINKALENDPDCRHLLPMNPNDDSLFKSXXXXFLFSKMINLSEPDTIDERAINKKKLTPFTVSENLNLALNSASAIGCTVVNIGAQDLKEGKPHLVLGLLWQIIKVGLFADIEISRNEALIALLNEGEDLEELMKLSPEELLLRWVNYHLTNAGWRTISNFSQDIKDSRAYFHLLNQIAPKGDRDDGPAVTIDLSGFNEKNDLKRAEFMLQEADKLGCRQFVTPADVVSGNPKLNLAFVANLFNMYPCLYKPDNNDIDINLLEGESKEERTFRNWMNSLGVNPYINHLYSDLADALVIFQLYEMIRVPVNWSHVNRPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLNEGNATLTLALVWQLMRRYTLNVLSDLGEGEKVNDDVIIKWVNQTLKNANKSTSISSFKDKSISTSLPVLDLIDAIAPNAVRQEMIKRENLSDEDKLNNAKYAISVARKIGARIYALPDDLVEVKPKMVMTVFACLMGRGLNRIK
SIO_010081: PLS1
subclass of: SO_0000673
so part of: PLS1
location: join(3393008..3393066,3395943..3396043,3401488..3401651,3404054..3404183,3408595..3408714,3410505..3410599,3416352..3416517,3416602..3416744,3417939..3418034,3420267..3420462,3425152..3425230,3428259..3428373,3434676..3434809,3435257..3435380,3441834..3441958,3442175..3442310)
location: region:3393008-3442310:1
so has part: feature:3393008-3393066:1:exon
so has part: feature:3395943-3396043:1:exon
so has part: feature:3401488-3401651:1:exon
so has part: feature:3404054-3404183:1:exon
so has part: feature:3408595-3408714:1:exon
so has part: feature:3410505-3410599:1:exon
so has part: feature:3416352-3416517:1:exon
so has part: feature:3416602-3416744:1:exon
so has part: feature:3417939-3418034:1:exon
so has part: feature:3420267-3420462:1:exon
so has part: feature:3425152-3425230:1:exon
so has part: feature:3428259-3428373:1:exon
so has part: feature:3434676-3434809:1:exon
so has part: feature:3435257-3435380:1:exon
so has part: feature:3441834-3441958:1:exon
so has part: feature:3442175-3442310:1:exon

XP_036350694.1
type: Protein
SIO_000068: ncbiprotein

position:3393008:1
position: 3393008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3393008-3393066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3395943-3396043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3401488-3401651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3404054-3404183:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3408595-3408714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3410505-3410599:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3416352-3416517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3416602-3416744:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3417939-3418034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3420267-3420462:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3425152-3425230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3428259-3428373:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3434676-3434809:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3435257-3435380:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3441834-3441958:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3442175-3442310:1:exon

TRPC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TRPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3447883..3547045
location: region:3447883-3547045:1
so has part: feature:3447883-3547045:1:exon
subclass of: SO_0000010

101516309
type: Gene
SIO_000068: ncbigene

position:3447883:1
position: 3447883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3547045:1
position: 3547045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3447883-3547045:1:exon

TRPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TRPC1
product: transient receptor potential cation channel subfamily C member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins
transcript id: XM_004597760.3
SIO_010081: TRPC1
subclass of: SO_0000673
so part of: TRPC1
location: join(3447883..3448087,3458221..3458375,3470717..3470919,3496243..3496374,3499204..3499399,3501360..3501696,3509661..3509800,3510911..3511054,3527394..3527569,3528293..3528451,3532432..3532474,3534117..3534311,3546818..3547045)
location: region:3447883-3547045:1
so has part: feature:3447883-3448087:1:exon
so has part: feature:3458221-3458375:1:exon
so has part: feature:3470717-3470919:1:exon
so has part: feature:3496243-3496374:1:exon
so has part: feature:3499204-3499399:1:exon
so has part: feature:3501360-3501696:1:exon
so has part: feature:3509661-3509800:1:exon
so has part: feature:3510911-3511054:1:exon
so has part: feature:3527394-3527569:1:exon
so has part: feature:3528293-3528451:1:exon
so has part: feature:3532432-3532474:1:exon
so has part: feature:3534117-3534311:1:exon
so has part: feature:3546818-3547045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3447883-3448087:1:exon

position:3448087:1
position: 3448087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3458221-3458375:1:exon

position:3458221:1
position: 3458221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3458375:1
position: 3458375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3470717-3470919:1:exon

position:3470717:1
position: 3470717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3470919:1
position: 3470919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3496243-3496374:1:exon

position:3496243:1
position: 3496243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3496374:1
position: 3496374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3499204-3499399:1:exon

position:3499204:1
position: 3499204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3499399:1
position: 3499399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3501360-3501696:1:exon

position:3501360:1
position: 3501360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3501696:1
position: 3501696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3509661-3509800:1:exon

position:3509661:1
position: 3509661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3509800:1
position: 3509800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3510911-3511054:1:exon

position:3510911:1
position: 3510911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3511054:1
position: 3511054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3527394-3527569:1:exon

position:3527394:1
position: 3527394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3527569:1
position: 3527569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3528293-3528451:1:exon

position:3528293:1
position: 3528293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3528451:1
position: 3528451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3532432-3532474:1:exon

position:3532432:1
position: 3532432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3532474:1
position: 3532474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3534117-3534311:1:exon

position:3534117:1
position: 3534117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3534311:1
position: 3534311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3546818-3547045:1:exon

position:3546818:1
position: 3546818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TRPC1
product: transient receptor potential cation channel subfamily C member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597759.2
SIO_010081: TRPC1
subclass of: SO_0000673
so part of: TRPC1
location: join(3447922..3448087,3458221..3458375,3465878..3465979,3470717..3470919,3496243..3496374,3499204..3499399,3501360..3501696,3509661..3509800,3510911..3511054,3527394..3527569,3528293..3528451,3532432..3532474,3534117..3534311,3546818..3547045)
location: region:3447922-3547045:1
so has part: feature:3447922-3448087:1:exon
so has part: feature:3458221-3458375:1:exon
so has part: feature:3465878-3465979:1:exon
so has part: feature:3470717-3470919:1:exon
so has part: feature:3496243-3496374:1:exon
so has part: feature:3499204-3499399:1:exon
so has part: feature:3501360-3501696:1:exon
so has part: feature:3509661-3509800:1:exon
so has part: feature:3510911-3511054:1:exon
so has part: feature:3527394-3527569:1:exon
so has part: feature:3528293-3528451:1:exon
so has part: feature:3532432-3532474:1:exon
so has part: feature:3534117-3534311:1:exon
so has part: feature:3546818-3547045:1:exon

position:3447922:1
position: 3447922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3447922-3448087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3458221-3458375:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3465878-3465979:1:exon

position:3465878:1
position: 3465878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3465979:1
position: 3465979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3470717-3470919:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3496243-3496374:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3499204-3499399:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3501360-3501696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3509661-3509800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3510911-3511054:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3527394-3527569:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3528293-3528451:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3532432-3532474:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3534117-3534311:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3546818-3547045:1:exon

TRPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TRPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short transient receptor potential channel 1 isoform X1
translation: MMAALYPTTDLSGASSLPSSPSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGDYYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAIDSEVVGAVDILLNHRSKPSSRPTIVKLMERIQSPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSNDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYSPQEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLLAVLGKNCLTSTNHEDKEWKFARAKLWLSYFDDKGTLPPPFNIIPSPKTICYMISSLSKWVCSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
SIO_010081: TRPC1
subclass of: SO_0000673
so part of: TRPC1
location: join(3447922..3448087,3458221..3458375,3465878..3465979,3470717..3470919,3496243..3496374,3499204..3499399,3501360..3501696,3509661..3509800,3510911..3511054,3527394..3527569,3528293..3528451,3532432..3532474,3534117..3534311,3546818..3547045)
location: region:3447922-3547045:1
so has part: feature:3447922-3448087:1:exon
so has part: feature:3458221-3458375:1:exon
so has part: feature:3465878-3465979:1:exon
so has part: feature:3470717-3470919:1:exon
so has part: feature:3496243-3496374:1:exon
so has part: feature:3499204-3499399:1:exon
so has part: feature:3501360-3501696:1:exon
so has part: feature:3509661-3509800:1:exon
so has part: feature:3510911-3511054:1:exon
so has part: feature:3527394-3527569:1:exon
so has part: feature:3528293-3528451:1:exon
so has part: feature:3532432-3532474:1:exon
so has part: feature:3534117-3534311:1:exon
so has part: feature:3546818-3547045:1:exon

XP_004597816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3447922-3448087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3458221-3458375:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3465878-3465979:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3470717-3470919:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3496243-3496374:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3499204-3499399:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3501360-3501696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3509661-3509800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3510911-3511054:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3527394-3527569:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3528293-3528451:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3532432-3532474:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3534117-3534311:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3546818-3547045:1:exon

TRPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TRPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short transient receptor potential channel 1 isoform X2
translation: MMAALYPTTDLSGASSLPSSPSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGDYYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQKLMERIQSPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSNDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYSPQEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLLAVLGKNCLTSTNHEDKEWKFARAKLWLSYFDDKGTLPPPFNIIPSPKTICYMISSLSKWVCSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
SIO_010081: TRPC1
subclass of: SO_0000673
so part of: TRPC1
location: join(3447922..3448087,3458221..3458375,3470717..3470919,3496243..3496374,3499204..3499399,3501360..3501696,3509661..3509800,3510911..3511054,3527394..3527569,3528293..3528451,3532432..3532474,3534117..3534311,3546818..3547045)
location: region:3447922-3547045:1
so has part: feature:3447922-3448087:1:exon
so has part: feature:3458221-3458375:1:exon
so has part: feature:3470717-3470919:1:exon
so has part: feature:3496243-3496374:1:exon
so has part: feature:3499204-3499399:1:exon
so has part: feature:3501360-3501696:1:exon
so has part: feature:3509661-3509800:1:exon
so has part: feature:3510911-3511054:1:exon
so has part: feature:3527394-3527569:1:exon
so has part: feature:3528293-3528451:1:exon
so has part: feature:3532432-3532474:1:exon
so has part: feature:3534117-3534311:1:exon
so has part: feature:3546818-3547045:1:exon

XP_004597817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3447922-3448087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3458221-3458375:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3470717-3470919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3496243-3496374:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3499204-3499399:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3501360-3501696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3509661-3509800:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3510911-3511054:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3527394-3527569:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3528293-3528451:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3532432-3532474:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3534117-3534311:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3546818-3547045:1:exon

PAQR9
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PAQR9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3690814..3691985)
location: region:3690814-3691985:-1
so has part: feature:3690814-3691985:-1:exon
subclass of: SO_0000010

101516064
type: Gene
SIO_000068: ncbigene

position:3690814:-1
position: 3690814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3691985:-1
position: 3691985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3690814-3691985:-1:exon

PAQR9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PAQR9
product: progestin and adipoQ receptor family member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 7 Proteins
transcript id: XM_004597758.1
SIO_010081: PAQR9
subclass of: SO_0000673
so part of: PAQR9
location: complement(3690814..3691985)
location: region:3690814-3691985:-1
so has part: feature:3690814-3691985:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3690814-3691985:-1:exon

PAQR9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PAQR9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor epsilon
translation: MSCTAHVFSCLSLRLRAVFFYLDYASISYYGFGSTVAYYYYLLPGLSLLDARVMTPYVQQRLGWHVDCTGLIAAYRALVLPVAFVLAVACTVACCKSRTDWCAYPFALRTFVFIMPLSMACPIMLESLLFDLRGENPTLFLHFYRRYFWLVVAAFFNVSKIPERIQPGLFDIIGHSHQLFHIFTFLSIYDQVYYVEEGLRQFLQAPPAAPTFSGTVGYMLLLVVCLGLVIRRFLKNSEFCSKK
SIO_010081: PAQR9
subclass of: SO_0000673
so part of: PAQR9
location: complement(3690923..3691654)
location: region:3690923-3691654:-1
so has part: feature:3690923-3691654:-1:exon

XP_004597815.1
type: Protein
SIO_000068: ncbiprotein

position:3690923:-1
position: 3690923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3691654:-1
position: 3691654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3690923-3691654:-1:exon

LOC118758856
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3744649..3772570
location: region:3744649-3772570:1
so has part: feature:3744649-3772570:1:exon
subclass of: SO_0000010

118758856
type: Gene
SIO_000068: ncbigene

position:3744649:1
position: 3744649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3772570:1
position: 3772570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3744649-3772570:1:exon

LOC118758856
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC118758856
product: U2 snRNP-associated SURP motif-containing protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036494811.1
SIO_010081: LOC118758856
subclass of: SO_0000673
so part of: LOC118758856
location: join(3744649..3744718,3760581..3760627,3764873..3765004,3766849..3766947,3772233..3772300,3772531..3772570)
location: region:3744649-3772570:1
so has part: feature:3744649-3744718:1:exon
so has part: feature:3760581-3760627:1:exon
so has part: feature:3764873-3765004:1:exon
so has part: feature:3766849-3766947:1:exon
so has part: feature:3772233-3772300:1:exon
so has part: feature:3772531-3772570:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3744649-3744718:1:exon

position:3744718:1
position: 3744718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3760581-3760627:1:exon

position:3760581:1
position: 3760581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3760627:1
position: 3760627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3764873-3765004:1:exon

position:3764873:1
position: 3764873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3765004:1
position: 3765004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3766849-3766947:1:exon

position:3766849:1
position: 3766849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3766947:1
position: 3766947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3772233-3772300:1:exon

position:3772233:1
position: 3772233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3772300:1
position: 3772300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3772531-3772570:1:exon

position:3772531:1
position: 3772531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118758856
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC118758856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U2 snRNP-associated SURP motif-containing protein-like
translation: MADKTPGGSQKASSKTRSSDAHSSGSSDAHMDASGPSDGDVPSRTRPKSPRKHNYRNESTRESVNDSPHQNLSKPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKPLKKGEKEKKKSNLELFKEELKHGSSIFTVMGYKA
SIO_010081: LOC118758856
subclass of: SO_0000673
so part of: LOC118758856
location: join(3744676..3744718,3760581..3760627,3764873..3765004,3766849..3766947,3772233..3772300,3772531..3772570)
location: region:3744676-3772570:1
so has part: feature:3744676-3744718:1:exon
so has part: feature:3760581-3760627:1:exon
so has part: feature:3764873-3765004:1:exon
so has part: feature:3766849-3766947:1:exon
so has part: feature:3772233-3772300:1:exon
so has part: feature:3772531-3772570:1:exon

XP_036350704.1
type: Protein
SIO_000068: ncbiprotein

position:3744676:1
position: 3744676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3744676-3744718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3760581-3760627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3764873-3765004:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3766849-3766947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3772233-3772300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3772531-3772570:1:exon

LOC101519161
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101519161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3752216..3802040
location: region:3752216-3802040:1
so has part: feature:3752216-3802040:1:exon
subclass of: SO_0000010

101519161
type: Gene
SIO_000068: ncbigene

position:3752216:1
position: 3752216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3802040:1
position: 3802040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3752216-3802040:1:exon

LOC101519161
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101519161
product: U2 snRNP-associated SURP motif-containing protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036494946.1
SIO_010081: LOC101519161
subclass of: SO_0000673
so part of: LOC101519161
location: join(3752216..3752345,3772233..3772300,3772827..3772921,3773003..3773038,3773124..3773206,3775629..3775794,3776189..3776400,3777328..3777371,3780445..3780549,3781417..3781483,3781563..3781726,3783004..3783166,3783635..3783714,3784411..3784498,3786101..3786223,3787725..3787881,3789092..3789187,3789873..3789939,3792385..3792544,3796025..3796135,3798607..3798725,3800162..3800329,3801492..3802040)
location: region:3752216-3802040:1
so has part: feature:3752216-3752345:1:exon
so has part: feature:3772233-3772300:1:exon
so has part: feature:3772827-3772921:1:exon
so has part: feature:3773003-3773038:1:exon
so has part: feature:3773124-3773206:1:exon
so has part: feature:3775629-3775794:1:exon
so has part: feature:3776189-3776400:1:exon
so has part: feature:3777328-3777371:1:exon
so has part: feature:3780445-3780549:1:exon
so has part: feature:3781417-3781483:1:exon
so has part: feature:3781563-3781726:1:exon
so has part: feature:3783004-3783166:1:exon
so has part: feature:3783635-3783714:1:exon
so has part: feature:3784411-3784498:1:exon
so has part: feature:3786101-3786223:1:exon
so has part: feature:3787725-3787881:1:exon
so has part: feature:3789092-3789187:1:exon
so has part: feature:3789873-3789939:1:exon
so has part: feature:3792385-3792544:1:exon
so has part: feature:3796025-3796135:1:exon
so has part: feature:3798607-3798725:1:exon
so has part: feature:3800162-3800329:1:exon
so has part: feature:3801492-3802040:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3752216-3752345:1:exon

position:3752345:1
position: 3752345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3772233-3772300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3772827-3772921:1:exon

position:3772827:1
position: 3772827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3772921:1
position: 3772921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3773003-3773038:1:exon

position:3773003:1
position: 3773003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3773038:1
position: 3773038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3773124-3773206:1:exon

position:3773124:1
position: 3773124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3773206:1
position: 3773206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3775629-3775794:1:exon

position:3775629:1
position: 3775629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3775794:1
position: 3775794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3776189-3776400:1:exon

position:3776189:1
position: 3776189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3776400:1
position: 3776400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3777328-3777371:1:exon

position:3777328:1
position: 3777328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3777371:1
position: 3777371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3780445-3780549:1:exon

position:3780445:1
position: 3780445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3780549:1
position: 3780549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3781417-3781483:1:exon

position:3781417:1
position: 3781417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3781483:1
position: 3781483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3781563-3781726:1:exon

position:3781563:1
position: 3781563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3781726:1
position: 3781726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3783004-3783166:1:exon

position:3783004:1
position: 3783004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3783166:1
position: 3783166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3783635-3783714:1:exon

position:3783635:1
position: 3783635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3783714:1
position: 3783714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3784411-3784498:1:exon

position:3784411:1
position: 3784411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3784498:1
position: 3784498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3786101-3786223:1:exon

position:3786101:1
position: 3786101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3786223:1
position: 3786223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3787725-3787881:1:exon

position:3787725:1
position: 3787725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3787881:1
position: 3787881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3789092-3789187:1:exon

position:3789092:1
position: 3789092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3789187:1
position: 3789187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3789873-3789939:1:exon

position:3789873:1
position: 3789873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3789939:1
position: 3789939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3792385-3792544:1:exon

position:3792385:1
position: 3792385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3792544:1
position: 3792544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3796025-3796135:1:exon

position:3796025:1
position: 3796025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3796135:1
position: 3796135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3798607-3798725:1:exon

position:3798607:1
position: 3798607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3798725:1
position: 3798725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3800162-3800329:1:exon

position:3800162:1
position: 3800162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3800329:1
position: 3800329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3801492-3802040:1:exon

position:3801492:1
position: 3801492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118758995
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758995
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 3766264..3766402
location: region:3766264-3766402:1
so has part: feature:3766264-3766402:1:exon

118758995
type: Gene
SIO_000068: ncbigene

position:3766264:1
position: 3766264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3766402:1
position: 3766402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3766264-3766402:1:exon

LOC118758995
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118758995
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118758995
subclass of: SO_0000673
so part of: LOC118758995
location: 3766264..3766402
location: region:3766264-3766402:1
so has part: feature:3766264-3766402:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3766264-3766402:1:exon

LOC101519161
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101519161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U2 snRNP-associated SURP motif-containing protein
translation: MDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQEQEAFVEEPSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDAAPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHDESEEEENQNQEEESEDEEDTQSSKSEDHHLYSNPIKEEMTESKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSASPSPSRSSSGRRVKSPSPKSERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKSKH
SIO_010081: LOC101519161
subclass of: SO_0000673
so part of: LOC101519161
location: join(3772921,3773003..3773038,3773124..3773206,3775629..3775794,3776189..3776400,3777328..3777371,3780445..3780549,3781417..3781483,3781563..3781726,3783004..3783166,3783635..3783714,3784411..3784498,3786101..3786223,3787725..3787881,3789092..3789187,3789873..3789939,3792385..3792544,3796025..3796135,3798607..3798725,3800162..3800329,3801492..3801630)
location: region:3772921-3801630:1
so has part: feature:3772921-3772921:1:exon
so has part: feature:3773003-3773038:1:exon
so has part: feature:3773124-3773206:1:exon
so has part: feature:3775629-3775794:1:exon
so has part: feature:3776189-3776400:1:exon
so has part: feature:3777328-3777371:1:exon
so has part: feature:3780445-3780549:1:exon
so has part: feature:3781417-3781483:1:exon
so has part: feature:3781563-3781726:1:exon
so has part: feature:3783004-3783166:1:exon
so has part: feature:3783635-3783714:1:exon
so has part: feature:3784411-3784498:1:exon
so has part: feature:3786101-3786223:1:exon
so has part: feature:3787725-3787881:1:exon
so has part: feature:3789092-3789187:1:exon
so has part: feature:3789873-3789939:1:exon
so has part: feature:3792385-3792544:1:exon
so has part: feature:3796025-3796135:1:exon
so has part: feature:3798607-3798725:1:exon
so has part: feature:3800162-3800329:1:exon
so has part: feature:3801492-3801630:1:exon

XP_036350839.1
type: Protein
SIO_000068: ncbiprotein

position:3801630:1
position: 3801630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3772921-3772921:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3773003-3773038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3773124-3773206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3775629-3775794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3776189-3776400:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3777328-3777371:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3780445-3780549:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3781417-3781483:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3781563-3781726:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3783004-3783166:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3783635-3783714:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3784411-3784498:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3786101-3786223:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3787725-3787881:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3789092-3789187:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3789873-3789939:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3792385-3792544:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3796025-3796135:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3798607-3798725:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3800162-3800329:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3801492-3801630:1:exon

LOC118758900
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758900
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(3791014..3791151)
location: region:3791014-3791151:-1
so has part: feature:3791014-3791151:-1:exon

118758900
type: Gene
SIO_000068: ncbigene

position:3791014:-1
position: 3791014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3791151:-1
position: 3791151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3791014-3791151:-1:exon

LOC118758900
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118758900
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118758900
subclass of: SO_0000673
so part of: LOC118758900
location: complement(3791014..3791151)
location: region:3791014-3791151:-1
so has part: feature:3791014-3791151:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3791014-3791151:-1:exon

LOC118758996
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758996
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3803399..3803556
location: region:3803399-3803556:1
so has part: feature:3803399-3803556:1:exon
subclass of: SO_0000623

118758996
type: Gene
SIO_000068: ncbigene

position:3803399:1
position: 3803399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3803556:1
position: 3803556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3803399-3803556:1:exon

LOC118758996
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758996
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995923.1
SIO_010081: LOC118758996
subclass of: SO_0000673
so part of: LOC118758996
location: 3803399..3803556
location: region:3803399-3803556:1
so has part: feature:3803399-3803556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3803399-3803556:1:exon

CHST2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CHST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3856968..3858766
location: region:3856968-3858766:1
so has part: feature:3856968-3858766:1:exon
subclass of: SO_0000010

101518908
type: Gene
SIO_000068: ncbigene

position:3856968:1
position: 3856968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3858766:1
position: 3858766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3856968-3858766:1:exon

CHST2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CHST2
product: carbohydrate sulfotransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_012930525.1
SIO_010081: CHST2
subclass of: SO_0000673
so part of: CHST2
location: join(3856968..3857106,3857532..3858766)
location: region:3856968-3858766:1
so has part: feature:3856968-3857106:1:exon
so has part: feature:3857532-3858766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3856968-3857106:1:exon

position:3857106:1
position: 3857106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3857532-3858766:1:exon

position:3857532:1
position: 3857532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHST2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CHST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 2
translation: MGELASGARDQPPLPPHEPRSRGPRAGARSRPAASSSRVVGPPPPRHPRTPYRPPPAAVAGAAPAGAAGLAGAASPPGNGTRGAGGGGAKRQLVYVFTTWRSGSSFFGELFNQNPEVFFLYEPVWHVWQKLYPGDAVSLQGAARDMLSALYRCDLSVFQLYSPAGSGGRNLTTLGIFGAATNKVVCSSPLCPAYRKEIVGLVDDRVCKKCPPQRLARFEEECRKYRTLVIKGVRVFDVAVLAPLLRDPALDLKVIHLVRDPRAVASSRIRSRHGLIRESLQVVRSRDPRAHRMPFLEAAGHKLGAKKEGMGGPADYHALGAMEVICNSMAKTLQTALQPPDWLQGHYLVVRYEDLVGDPVKTLRRVYDFVGLLVSPEMEQFALNMTSGSGSSSKPFVVSARNATQAANAWRTALTFQQIKQVEEFCHQPMAVLGYERVNSPEEVKDLSKSLLRKPRL
SIO_010081: CHST2
subclass of: SO_0000673
so part of: CHST2
location: join(3856968..3857106,3857532..3858766)
location: region:3856968-3858766:1
so has part: feature:3856968-3857106:1:exon
so has part: feature:3857532-3858766:1:exon

XP_012785979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3856968-3857106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3857532-3858766:1:exon

SLC9A9
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SLC9A9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4039516..4643498)
location: region:4039516-4643498:-1
so has part: feature:4039516-4643498:-1:exon
subclass of: SO_0000010

101536627
type: Gene
SIO_000068: ncbigene

position:4039516:-1
position: 4039516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4643498:-1
position: 4643498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4039516-4643498:-1:exon

SLC9A9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SLC9A9
product: solute carrier family 9 member A9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597757.2
SIO_010081: SLC9A9
subclass of: SO_0000673
so part of: SLC9A9
location: complement(join(4039516..4039743,4040967..4041072,4158129..4158208,4173318..4173369,4251201..4251354,4277418..4277529,4278751..4278864,4361094..4361182,4385044..4385149,4388941..4389079,4465685..4465790,4517848..4517963,4599875..4599951,4601405..4601482,4627114..4627316,4643175..4643498))
location: region:4039516-4643498:-1
so has part: feature:4643175-4643498:-1:exon
so has part: feature:4627114-4627316:-1:exon
so has part: feature:4601405-4601482:-1:exon
so has part: feature:4599875-4599951:-1:exon
so has part: feature:4517848-4517963:-1:exon
so has part: feature:4465685-4465790:-1:exon
so has part: feature:4388941-4389079:-1:exon
so has part: feature:4385044-4385149:-1:exon
so has part: feature:4361094-4361182:-1:exon
so has part: feature:4278751-4278864:-1:exon
so has part: feature:4277418-4277529:-1:exon
so has part: feature:4251201-4251354:-1:exon
so has part: feature:4173318-4173369:-1:exon
so has part: feature:4158129-4158208:-1:exon
so has part: feature:4040967-4041072:-1:exon
so has part: feature:4039516-4039743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4643175-4643498:-1:exon

position:4643175:-1
position: 4643175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4627114-4627316:-1:exon

position:4627114:-1
position: 4627114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4627316:-1
position: 4627316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4601405-4601482:-1:exon

position:4601405:-1
position: 4601405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4601482:-1
position: 4601482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4599875-4599951:-1:exon

position:4599875:-1
position: 4599875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4599951:-1
position: 4599951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4517848-4517963:-1:exon

position:4517848:-1
position: 4517848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4517963:-1
position: 4517963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4465685-4465790:-1:exon

position:4465685:-1
position: 4465685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4465790:-1
position: 4465790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4388941-4389079:-1:exon

position:4388941:-1
position: 4388941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4389079:-1
position: 4389079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4385044-4385149:-1:exon

position:4385044:-1
position: 4385044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4385149:-1
position: 4385149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4361094-4361182:-1:exon

position:4361094:-1
position: 4361094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4361182:-1
position: 4361182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4278751-4278864:-1:exon

position:4278751:-1
position: 4278751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4278864:-1
position: 4278864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4277418-4277529:-1:exon

position:4277418:-1
position: 4277418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4277529:-1
position: 4277529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4251201-4251354:-1:exon

position:4251201:-1
position: 4251201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4251354:-1
position: 4251354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4173318-4173369:-1:exon

position:4173318:-1
position: 4173318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4173369:-1
position: 4173369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4158129-4158208:-1:exon

position:4158129:-1
position: 4158129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4158208:-1
position: 4158208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4040967-4041072:-1:exon

position:4040967:-1
position: 4040967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4041072:-1
position: 4041072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4039516-4039743:-1:exon

position:4039743:-1
position: 4039743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC9A9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SLC9A9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 9
translation: MERQPRFLSEQDEYQFQHQGAVELLVFNFLLILTILTIWLFKNHRFRFLHETGGAMVYGLIMGLILRYATAPTDIESGTVYDCGKLTFSPSTLLVNITEKVYEYKYKREISQHNVNPHQGNAILEKMTFDPEIFFNVLLPPIIFHAGYSLKKRHFFQNLGSILTYAFLGTAVSCIVIGLIVYGFVKAMIYAGQLKNGDFHFTDCLFFGSLMSATDPVTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVLTYSISIYSPKENPNTFDAAAFFQSVGNFLGIFAGSFAMGSAYAVVTALLTKFTKLCEFPMLETGLFFLLSWSAFLSAEAAGLTGIVAVLFCGVTQAHYTYNNLSSDSKIRTKQLFEFMNFLAENVIFCYMGLALFTFQNHIFNALFILGAFLAIFIARACNIYPLSFLLNLGRKQKIPWSFQHMMMFSGLRGAIAFALAIRNTESQPKQMMFTTTLLLVFFTVWVFGGGTTPMLTWLQIRVGVDLDDNLKEEPPSHQEANNLNKSTTKTESAQLFRMWHGFDHKYLKPILTHAGPPLTTTLPEWCGPISRLLTSPQAYGEQLKEDDVECIVNQDELAMNYQEQTSSPCSPPGRLDQEQKPSPQTPSKENIYEGDLGLGGYELKLEQTLGQSQMN
SIO_010081: SLC9A9
subclass of: SO_0000673
so part of: SLC9A9
location: complement(join(4039516..4039743,4040967..4041072,4158129..4158208,4173318..4173369,4251201..4251354,4277418..4277529,4278751..4278864,4361094..4361182,4385044..4385149,4388941..4389079,4465685..4465790,4517848..4517963,4599875..4599951,4601405..4601482,4627114..4627316,4643175..4643349))
location: region:4039516-4643349:-1
so has part: feature:4643175-4643349:-1:exon
so has part: feature:4627114-4627316:-1:exon
so has part: feature:4601405-4601482:-1:exon
so has part: feature:4599875-4599951:-1:exon
so has part: feature:4517848-4517963:-1:exon
so has part: feature:4465685-4465790:-1:exon
so has part: feature:4388941-4389079:-1:exon
so has part: feature:4385044-4385149:-1:exon
so has part: feature:4361094-4361182:-1:exon
so has part: feature:4278751-4278864:-1:exon
so has part: feature:4277418-4277529:-1:exon
so has part: feature:4251201-4251354:-1:exon
so has part: feature:4173318-4173369:-1:exon
so has part: feature:4158129-4158208:-1:exon
so has part: feature:4040967-4041072:-1:exon
so has part: feature:4039516-4039743:-1:exon

XP_004597814.1
type: Protein
SIO_000068: ncbiprotein

position:4643349:-1
position: 4643349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4643175-4643349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4627114-4627316:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4601405-4601482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4599875-4599951:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4517848-4517963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4465685-4465790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4388941-4389079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4385044-4385149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4361094-4361182:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4278751-4278864:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4277418-4277529:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4251201-4251354:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4173318-4173369:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4158129-4158208:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4040967-4041072:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4039516-4039743:-1:exon

LOC105942474
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105942474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4116942..4135384
location: region:4116942-4135384:1
so has part: feature:4116942-4135384:1:exon
subclass of: SO_0000011

105942474
type: Gene
SIO_000068: ncbigene

position:4116942:1
position: 4116942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4135384:1
position: 4135384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4116942-4135384:1:exon

LOC105942474
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: lncRNA
gene: LOC105942474
product: uncharacterized LOC105942474
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001168457.2
SIO_010081: LOC105942474
subclass of: SO_0000673
so part of: LOC105942474
location: join(4116942..4117325,4134963..4135384)
location: region:4116942-4135384:1
so has part: feature:4116942-4117325:1:exon
so has part: feature:4134963-4135384:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4116942-4117325:1:exon

position:4117325:1
position: 4117325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4134963-4135384:1:exon

position:4134963:1
position: 4134963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DIPK2A
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: DIPK2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4760668..4780351
location: region:4760668-4780351:1
so has part: feature:4760668-4780351:1:exon
subclass of: SO_0000010

101536377
type: Gene
SIO_000068: ncbigene

position:4760668:1
position: 4760668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4780351:1
position: 4780351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4760668-4780351:1:exon

DIPK2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: DIPK2A
product: divergent protein kinase domain 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_004597756.1
SIO_010081: DIPK2A
subclass of: SO_0000673
so part of: DIPK2A
location: join(4760668..4761324,4777021..4777324,4780020..4780351)
location: region:4760668-4780351:1
so has part: feature:4760668-4761324:1:exon
so has part: feature:4777021-4777324:1:exon
so has part: feature:4780020-4780351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4760668-4761324:1:exon

position:4761324:1
position: 4761324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4777021-4777324:1:exon

position:4777021:1
position: 4777021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4777324:1
position: 4777324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4780020-4780351:1:exon

position:4780020:1
position: 4780020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DIPK2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: DIPK2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: divergent protein kinase domain 2A
translation: MWRLVPPKLGRLSRSLKLAALGSLLVLMVLHSPSLLASWQRNELTDRRFLQLNKCPACFGTSWCRRFLNGQVVFEAWGRLRLLDFLNVKNVYFAQYGEPREGGRRRVVLKRLGSQRELAQLDQSICKRATGRPRCDLLQAMPRTEFARLNGDVRLLTPEAVEGWSDLVHCPSQRLLDRLVRRYAETKDSGSFLLRNLKDSERMQLLLTLAFNPEPLVLQSFPSDEGWPFAKYLGACGRMVAVNYVGEELWSYFNAPWEKRVDLAWQLMEIAEQLTNNDFEFALYLLDVSFDNFAVGPRDGKVIIVDAENVLVADKRLIRQNKPENWDVWYESKFDDCDKEACLSFSKEILCARATVDHNYYAVCQNLLSRHATWRGTSGGLLHDPPSEIAKDGRLEALLDECANPKKRYGRFQAAKELREYLAQLSNNVR
SIO_010081: DIPK2A
subclass of: SO_0000673
so part of: DIPK2A
location: join(4760668..4761324,4777021..4777324,4780020..4780351)
location: region:4760668-4780351:1
so has part: feature:4760668-4761324:1:exon
so has part: feature:4777021-4777324:1:exon
so has part: feature:4780020-4780351:1:exon

XP_004597813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4760668-4761324:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4777021-4777324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4780020-4780351:1:exon

LOC118758975
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758975
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(4978848..4978963)
location: region:4978848-4978963:-1
so has part: feature:4978848-4978963:-1:exon

118758975
type: Gene
SIO_000068: ncbigene

position:4978848:-1
position: 4978848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4978963:-1
position: 4978963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4978848-4978963:-1:exon

LOC118758975
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118758975
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118758975
subclass of: SO_0000673
so part of: LOC118758975
location: complement(4978848..4978963)
location: region:4978848-4978963:-1
so has part: feature:4978848-4978963:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4978848-4978963:-1:exon

LOC101518669
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101518669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5026540..5054073)
location: region:5026540-5054073:-1
so has part: feature:5026540-5054073:-1:exon

101518669
type: Gene
SIO_000068: ncbigene

position:5026540:-1
position: 5026540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5054073:-1
position: 5054073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5026540-5054073:-1:exon

LOC101518669
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101518669
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC101518669
subclass of: SO_0000673
so part of: LOC101518669
location: complement(5026540..5027231)
location: region:5026540-5027231:-1
so has part: feature:5026540-5027231:-1:exon

position:5027231:-1
position: 5027231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5026540-5027231:-1:exon

LOC101518669
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101518669
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC101518669
subclass of: SO_0000673
so part of: LOC101518669
location: complement(5053939..5054073)
location: region:5053939-5054073:-1
so has part: feature:5053939-5054073:-1:exon

position:5053939:-1
position: 5053939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5053939-5054073:-1:exon

LOC101536136
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101536136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5489671..5490147
location: region:5489671-5490147:1
so has part: feature:5489671-5490147:1:exon
subclass of: SO_0000010

101536136
type: Gene
SIO_000068: ncbigene

position:5489671:1
position: 5489671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5490147:1
position: 5490147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5489671-5490147:1:exon

LOC101536136
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101536136
product: RNA-binding protein 38-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_036494880.1
SIO_010081: LOC101536136
subclass of: SO_0000673
so part of: LOC101536136
location: 5489671..5490147
location: region:5489671-5490147:1
so has part: feature:5489671-5490147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5489671-5490147:1:exon

LOC101536136
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101536136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 38-like
translation: MADRAAAERACKDLNPIIDGRKANVNLTSVGAKPRSLQTGFAVGVQQLHPTLIQQTYGLTPHYPQAMVQPSVVIPAAPGPSLSSPYLEYTPAIPAYAQYPPATYDQYPYAASPAMATSFVSYGCPAAAMPQGLSAPAGTTFMQYQAPQLQPNCMQ
SIO_010081: LOC101536136
subclass of: SO_0000673
so part of: LOC101536136
location: 5489680..5490147
location: region:5489680-5490147:1
so has part: feature:5489680-5490147:1:exon

XP_036350773.1
type: Protein
SIO_000068: ncbiprotein

position:5489680:1
position: 5489680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5489680-5490147:1:exon

LOC118758906
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758906
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 5656520..5656662
location: region:5656520-5656662:1
so has part: feature:5656520-5656662:1:exon

118758906
type: Gene
SIO_000068: ncbigene

position:5656520:1
position: 5656520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5656662:1
position: 5656662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5656520-5656662:1:exon

LOC118758906
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118758906
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118758906
subclass of: SO_0000673
so part of: LOC118758906
location: 5656520..5656662
location: region:5656520-5656662:1
so has part: feature:5656520-5656662:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5656520-5656662:1:exon

LOC101535887
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101535887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6266275..6266942
location: region:6266275-6266942:1
so has part: feature:6266275-6266942:1:exon

101535887
type: Gene
SIO_000068: ncbigene

position:6266275:1
position: 6266275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6266942:1
position: 6266942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6266275-6266942:1:exon

LOC101535887
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101535887
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101535887
subclass of: SO_0000673
so part of: LOC101535887
location: 6266275..6266942
location: region:6266275-6266942:1
so has part: feature:6266275-6266942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6266275-6266942:1:exon

LOC118758943
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758943
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6387638..6387743
location: region:6387638-6387743:1
so has part: feature:6387638-6387743:1:exon
subclass of: SO_0000623

118758943
type: Gene
SIO_000068: ncbigene

position:6387638:1
position: 6387638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6387743:1
position: 6387743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6387638-6387743:1:exon

LOC118758943
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758943
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995892.1
SIO_010081: LOC118758943
subclass of: SO_0000673
so part of: LOC118758943
location: 6387638..6387743
location: region:6387638-6387743:1
so has part: feature:6387638-6387743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6387638-6387743:1:exon

LOC118758960
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758960
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6410592..6410693
location: region:6410592-6410693:1
so has part: feature:6410592-6410693:1:exon
subclass of: SO_0000623

118758960
type: Gene
SIO_000068: ncbigene

position:6410592:1
position: 6410592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6410693:1
position: 6410693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6410592-6410693:1:exon

LOC118758960
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758960
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995903.1
SIO_010081: LOC118758960
subclass of: SO_0000673
so part of: LOC118758960
location: 6410592..6410693
location: region:6410592-6410693:1
so has part: feature:6410592-6410693:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6410592-6410693:1:exon

LOC101518429
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101518429
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6420991..6421696)
location: region:6420991-6421696:-1
so has part: feature:6420991-6421696:-1:exon

101518429
type: Gene
SIO_000068: ncbigene

position:6420991:-1
position: 6420991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6421696:-1
position: 6421696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6420991-6421696:-1:exon

LOC101518429
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101518429
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC101518429
subclass of: SO_0000673
so part of: LOC101518429
location: complement(6420991..6421696)
location: region:6420991-6421696:-1
so has part: feature:6420991-6421696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6420991-6421696:-1:exon

LOC105942472
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105942472
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6427276..6438294
location: region:6427276-6438294:1
so has part: feature:6427276-6438294:1:exon
subclass of: SO_0000010

105942472
type: Gene
SIO_000068: ncbigene

position:6427276:1
position: 6427276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6438294:1
position: 6438294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6427276-6438294:1:exon

LOC105942472
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC105942472
product: uncharacterized LOC105942472
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_012930523.1
SIO_010081: LOC105942472
subclass of: SO_0000673
so part of: LOC105942472
location: join(6427276..6429100,6438143..6438294)
location: region:6427276-6438294:1
so has part: feature:6427276-6429100:1:exon
so has part: feature:6438143-6438294:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6427276-6429100:1:exon

position:6429100:1
position: 6429100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6438143-6438294:1:exon

position:6438143:1
position: 6438143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105942472
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC105942472
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein LOC105942472
translation: MGQSITTPLSLTLQHWRDVQNTANNQSVNVRKRKWITLCSSEWPTFNVGWPRDGTFDLNIILQVKHKVMDPGPHGHPDQVAYIITWEALAHDPPLWVKPFVILKPPSITIPSAPSLTPITERPSQSSLYPTVVRPTRIQNERKKPPKVLPPGEDLVIDLLTEEPPPYRGPGHQQAAEAEPEETPAADPAPSPMAGRLQGRREQPPDSTSRALPLRTGPNDRLQYWPFSASDLYNWKHNNPPFSKDPSMLTSLIESILVTHQPTWDDCQQLLQTLLTTEEKQRIFLEARKNVLGDNGRPTQLPNEIDAAFPLERPNWDFTTDEGRNHLRLYRQLLIAGLHGAARRPTNLAQIKQVIQGPEETPSAFLERLKEAYHIYTPYNPEDPGQATNVAMSFIWQSAPDIRKKLERLDNLRESSIQDLLKEAERIFNKRETQEERDERLKKETEERDERLRREAEERENVRDRKRNKEISRLLATIVSGQSRERQGEDRRSPQIDRDQCAYCKEKGHWARDCPKNPKKFKRPGRQTQTSLLTLEDXGRSGPGAPPEPRITLNVGGQPVTFLVDTGAQHSVLTHAPGPLSDRSAWVQGATGGKRYRWTTDRRVQLATVPDFSCGNSTKNAHADLRQKTEAAGTVQLFRMNCRAGPLHKLDAIPGEAL
SIO_010081: LOC105942472
subclass of: SO_0000673
so part of: LOC105942472
location: join(6427276..6429100,6438143..6438294)
location: region:6427276-6438294:1
so has part: feature:6427276-6429100:1:exon
so has part: feature:6438143-6438294:1:exon

XP_012785977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6427276-6429100:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6438143-6438294:1:exon

PLOD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PLOD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6527234..6570406)
location: region:6527234-6570406:-1
so has part: feature:6527234-6570406:-1:exon
subclass of: SO_0000010

101535651
type: Gene
SIO_000068: ncbigene

position:6527234:-1
position: 6527234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6570406:-1
position: 6570406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6527234-6570406:-1:exon

PLOD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PLOD2
product: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597755.2
SIO_010081: PLOD2
subclass of: SO_0000673
so part of: PLOD2
location: complement(join(6527234..6528617,6528782..6528907,6529018..6529164,6530235..6530339,6531595..6531660,6534353..6534466,6535427..6535489,6536852..6536993,6538548..6538673,6542788..6542892,6544318..6544439,6545822..6545947,6548725..6548826,6552532..6552629,6554757..6554820,6556294..6556406,6557497..6557660,6567984..6568120,6570317..6570406))
location: region:6527234-6570406:-1
so has part: feature:6570317-6570406:-1:exon
so has part: feature:6567984-6568120:-1:exon
so has part: feature:6557497-6557660:-1:exon
so has part: feature:6556294-6556406:-1:exon
so has part: feature:6554757-6554820:-1:exon
so has part: feature:6552532-6552629:-1:exon
so has part: feature:6548725-6548826:-1:exon
so has part: feature:6545822-6545947:-1:exon
so has part: feature:6544318-6544439:-1:exon
so has part: feature:6542788-6542892:-1:exon
so has part: feature:6538548-6538673:-1:exon
so has part: feature:6536852-6536993:-1:exon
so has part: feature:6535427-6535489:-1:exon
so has part: feature:6534353-6534466:-1:exon
so has part: feature:6531595-6531660:-1:exon
so has part: feature:6530235-6530339:-1:exon
so has part: feature:6529018-6529164:-1:exon
so has part: feature:6528782-6528907:-1:exon
so has part: feature:6527234-6528617:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6570317-6570406:-1:exon

position:6570317:-1
position: 6570317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6567984-6568120:-1:exon

position:6567984:-1
position: 6567984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6568120:-1
position: 6568120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6557497-6557660:-1:exon

position:6557497:-1
position: 6557497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6557660:-1
position: 6557660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6556294-6556406:-1:exon

position:6556294:-1
position: 6556294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6556406:-1
position: 6556406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6554757-6554820:-1:exon

position:6554757:-1
position: 6554757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6554820:-1
position: 6554820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6552532-6552629:-1:exon

position:6552532:-1
position: 6552532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6552629:-1
position: 6552629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6548725-6548826:-1:exon

position:6548725:-1
position: 6548725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6548826:-1
position: 6548826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6545822-6545947:-1:exon

position:6545822:-1
position: 6545822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6545947:-1
position: 6545947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6544318-6544439:-1:exon

position:6544318:-1
position: 6544318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6544439:-1
position: 6544439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6542788-6542892:-1:exon

position:6542788:-1
position: 6542788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6542892:-1
position: 6542892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6538548-6538673:-1:exon

position:6538548:-1
position: 6538548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6538673:-1
position: 6538673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6536852-6536993:-1:exon

position:6536852:-1
position: 6536852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6536993:-1
position: 6536993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6535427-6535489:-1:exon

position:6535427:-1
position: 6535427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6535489:-1
position: 6535489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6534353-6534466:-1:exon

position:6534353:-1
position: 6534353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6534466:-1
position: 6534466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6531595-6531660:-1:exon

position:6531595:-1
position: 6531595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6531660:-1
position: 6531660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6530235-6530339:-1:exon

position:6530235:-1
position: 6530235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6530339:-1
position: 6530339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6529018-6529164:-1:exon

position:6529018:-1
position: 6529018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6529164:-1
position: 6529164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6528782-6528907:-1:exon

position:6528782:-1
position: 6528782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6528907:-1
position: 6528907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6527234-6528617:-1:exon

position:6528617:-1
position: 6528617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLOD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PLOD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2
translation: MQSATYFNYTVKVLGQGEEWRGGGGINSIGGGQKVRLMKEAMQHYASQEDLIILFTECFHVIFAGGPEEILKKFQKTNHKVVFAADGLLWPDKRLAEKYPIVHSGKPYLNSGGFIGYAPYVNRIVQQWALQDNDDDQLFYTKIYIDPLKRESFNITLDHKCKIFQTLNGAVDEVVLKFENNRTRVKNTFYETLPVVLNGNGPTKIVLNYFGNYVPNLWTQSNSCLLCEVDTIDLSSVNVHPNVTIGVFIEQPTPFLPRFLDTLLTLDYPKEALKLFIHNKEVYHEKDLKVFYDKAKHEISTIKIVGPEENLSQAKARNMGMDFCRQDEKCDYYFSVDSDVVLTNPRTLKILIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYARSEDYVDIVQGKRVGIWNVPYIANIYLIKGKTLRSEMRERNYFVRDKLDPDMALCRNARDMTLQREKDSPTPETFQMLSPPKGMFMYISNRHEFGRLLSTANYNTSHYNNDLWQIFENPVDWKEKYINRDYSKIFTENIVEQPCPDVFWFPIFSEKACDELVEEMEHYGQWSGGKHHDSRIAGGYENVPTDDIHMKQIGLENVWLHFIREFIAPVTLKVFAGYYTKGFALLNFVVKYSPERQRSLRPHHDASTFTINIALNNVGEDFQGGGCKFLRYNCSIESPRKGWSFMHPGRLTHLHEGLPVRNGTRYIAVSFIDP
SIO_010081: PLOD2
subclass of: SO_0000673
so part of: PLOD2
location: complement(join(6528462..6528617,6528782..6528907,6529018..6529164,6530235..6530339,6531595..6531660,6534353..6534466,6535427..6535489,6536852..6536993,6538548..6538673,6542788..6542892,6544318..6544439,6545822..6545947,6548725..6548826,6552532..6552629,6554757..6554820,6556294..6556406,6557497..6557660,6567984..6568120,6570317..6570352))
location: region:6528462-6570352:-1
so has part: feature:6570317-6570352:-1:exon
so has part: feature:6567984-6568120:-1:exon
so has part: feature:6557497-6557660:-1:exon
so has part: feature:6556294-6556406:-1:exon
so has part: feature:6554757-6554820:-1:exon
so has part: feature:6552532-6552629:-1:exon
so has part: feature:6548725-6548826:-1:exon
so has part: feature:6545822-6545947:-1:exon
so has part: feature:6544318-6544439:-1:exon
so has part: feature:6542788-6542892:-1:exon
so has part: feature:6538548-6538673:-1:exon
so has part: feature:6536852-6536993:-1:exon
so has part: feature:6535427-6535489:-1:exon
so has part: feature:6534353-6534466:-1:exon
so has part: feature:6531595-6531660:-1:exon
so has part: feature:6530235-6530339:-1:exon
so has part: feature:6529018-6529164:-1:exon
so has part: feature:6528782-6528907:-1:exon
so has part: feature:6528462-6528617:-1:exon

XP_004597812.1
type: Protein
SIO_000068: ncbiprotein

position:6528462:-1
position: 6528462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6570352:-1
position: 6570352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6570317-6570352:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6567984-6568120:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6557497-6557660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6556294-6556406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6554757-6554820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6552532-6552629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6548725-6548826:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6545822-6545947:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6544318-6544439:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6542788-6542892:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6538548-6538673:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6536852-6536993:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6535427-6535489:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6534353-6534466:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6531595-6531660:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6530235-6530339:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6529018-6529164:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6528782-6528907:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6528462-6528617:-1:exon

PLSCR4
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PLSCR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6648883..6668884)
location: region:6648883-6668884:-1
so has part: feature:6648883-6668884:-1:exon
subclass of: SO_0000010

101517942
type: Gene
SIO_000068: ncbigene

position:6648883:-1
position: 6648883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6668884:-1
position: 6668884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6648883-6668884:-1:exon

PLSCR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PLSCR4
product: phospholipid scramblase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_004597765.3
SIO_010081: PLSCR4
subclass of: SO_0000673
so part of: PLSCR4
location: complement(join(6648883..6648930,6649597..6649755,6651357..6651518,6653520..6653746,6654609..6654651,6659478..6659713,6668788..6668884))
location: region:6648883-6668884:-1
so has part: feature:6668788-6668884:-1:exon
so has part: feature:6659478-6659713:-1:exon
so has part: feature:6654609-6654651:-1:exon
so has part: feature:6653520-6653746:-1:exon
so has part: feature:6651357-6651518:-1:exon
so has part: feature:6649597-6649755:-1:exon
so has part: feature:6648883-6648930:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6668788-6668884:-1:exon

position:6668788:-1
position: 6668788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6659478-6659713:-1:exon

position:6659478:-1
position: 6659478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6659713:-1
position: 6659713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6654609-6654651:-1:exon

position:6654609:-1
position: 6654609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6654651:-1
position: 6654651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6653520-6653746:-1:exon

position:6653520:-1
position: 6653520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6653746:-1
position: 6653746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6651357-6651518:-1:exon

position:6651357:-1
position: 6651357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6651518:-1
position: 6651518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6649597-6649755:-1:exon

position:6649597:-1
position: 6649597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6649755:-1
position: 6649755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6648883-6648930:-1:exon

position:6648930:-1
position: 6648930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLSCR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PLSCR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid scramblase 4
translation: MEGQVTSPDPRPPSPPDYSSHFVPGPSGTAVPPPIANPAGLPIGYYATQNPSTFPLYQPIGTAQLIQSQPGKYPTPNQHAAVTWMPVPPPIPNCPAGLEYLAQLDNIHVLQHFEPLEMRTHFETINSYDIKNNSNQMVYFVTEDTDDYARNSYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTLGFVAEHWNLCRAVYSIQNERKEKVLKVRGPCSTYGCGSDSVFEVQSLDGVSNIGNIIRKWNGLLSAMEDADHFDIHFPLDMDVKMKAMIFGTCFLIDFMYFERSPSQHSSA
SIO_010081: PLSCR4
subclass of: SO_0000673
so part of: PLSCR4
location: complement(join(6648883..6648930,6649597..6649755,6651357..6651518,6653520..6653746,6654609..6654651,6659478..6659713,6668788..6668860))
location: region:6648883-6668860:-1
so has part: feature:6668788-6668860:-1:exon
so has part: feature:6659478-6659713:-1:exon
so has part: feature:6654609-6654651:-1:exon
so has part: feature:6653520-6653746:-1:exon
so has part: feature:6651357-6651518:-1:exon
so has part: feature:6649597-6649755:-1:exon
so has part: feature:6648883-6648930:-1:exon

XP_004597822.1
type: Protein
SIO_000068: ncbiprotein

position:6668860:-1
position: 6668860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6668788-6668860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6659478-6659713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6654609-6654651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6653520-6653746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6651357-6651518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6649597-6649755:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6648883-6648930:-1:exon

LOC105942475
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105942475
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6731622..6762851)
location: region:6731622-6762851:-1
so has part: feature:6731622-6762851:-1:exon
subclass of: SO_0000010

105942475
type: Gene
SIO_000068: ncbigene

position:6731622:-1
position: 6731622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6762851:-1
position: 6762851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6731622-6762851:-1:exon

LOC105942475
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC105942475
product: phospholipid scramblase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012930529.1
SIO_010081: LOC105942475
subclass of: SO_0000673
so part of: LOC105942475
location: complement(join(6731622..6731770,6736292..6736453,6748172..6748392,6759900..6759939,6760875..6761039,6762751..6762851))
location: region:6731622-6762851:-1
so has part: feature:6762751-6762851:-1:exon
so has part: feature:6760875-6761039:-1:exon
so has part: feature:6759900-6759939:-1:exon
so has part: feature:6748172-6748392:-1:exon
so has part: feature:6736292-6736453:-1:exon
so has part: feature:6731622-6731770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6762751-6762851:-1:exon

position:6762751:-1
position: 6762751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6760875-6761039:-1:exon

position:6760875:-1
position: 6760875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6761039:-1
position: 6761039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6759900-6759939:-1:exon

position:6759900:-1
position: 6759900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6759939:-1
position: 6759939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6748172-6748392:-1:exon

position:6748172:-1
position: 6748172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6748392:-1
position: 6748392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6736292-6736453:-1:exon

position:6736292:-1
position: 6736292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6736453:-1
position: 6736453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6731622-6731770:-1:exon

position:6731770:-1
position: 6731770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105942475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC105942475
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid scramblase 2-like
translation: MALHDLYPTMQRMCTPNNTGYCPPGLEHLDKVNQLVVCQRFDMEVLSHLEINKTYEVMNNQGHRLYFAEEKTNWFIQNFCGATRPFTMTIYDNLGQDVITIHKALRCSCCLSRCCLQKLLSLDEETAIGNISKQCPAVVKRLLSDTGKFGIQFPFDLDVKIKALVLAASFLINYMYYELWP
SIO_010081: LOC105942475
subclass of: SO_0000673
so part of: LOC105942475
location: complement(join(6731741..6731770,6736292..6736453,6748172..6748392,6759900..6759939,6760875..6760967))
location: region:6731741-6760967:-1
so has part: feature:6760875-6760967:-1:exon
so has part: feature:6759900-6759939:-1:exon
so has part: feature:6748172-6748392:-1:exon
so has part: feature:6736292-6736453:-1:exon
so has part: feature:6731741-6731770:-1:exon

XP_012785983.1
type: Protein
SIO_000068: ncbiprotein

position:6731741:-1
position: 6731741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6760967:-1
position: 6760967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6760875-6760967:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6759900-6759939:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6748172-6748392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6736292-6736453:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6731741-6731770:-1:exon

LOC101517691
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101517691
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6784531..6801115)
location: region:6784531-6801115:-1
so has part: feature:6784531-6801115:-1:exon
subclass of: SO_0000010

101517691
type: Gene
SIO_000068: ncbigene

position:6784531:-1
position: 6784531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6801115:-1
position: 6801115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6784531-6801115:-1:exon

LOC101517691
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101517691
product: phospholipid scramblase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004597764.2
SIO_010081: LOC101517691
subclass of: SO_0000673
so part of: LOC101517691
location: complement(join(6784531..6784584,6791756..6791917,6795660..6795821,6797250..6797470,6798456..6798498,6800968..6801115))
location: region:6784531-6801115:-1
so has part: feature:6800968-6801115:-1:exon
so has part: feature:6798456-6798498:-1:exon
so has part: feature:6797250-6797470:-1:exon
so has part: feature:6795660-6795821:-1:exon
so has part: feature:6791756-6791917:-1:exon
so has part: feature:6784531-6784584:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6800968-6801115:-1:exon

position:6800968:-1
position: 6800968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6798456-6798498:-1:exon

position:6798456:-1
position: 6798456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6798498:-1
position: 6798498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6797250-6797470:-1:exon

position:6797250:-1
position: 6797250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6797470:-1
position: 6797470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6795660-6795821:-1:exon

position:6795660:-1
position: 6795660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6795821:-1
position: 6795821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6791756-6791917:-1:exon

position:6791756:-1
position: 6791756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6791917:-1
position: 6791917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6784531-6784584:-1:exon

position:6784584:-1
position: 6784584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101517691
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101517691
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid scramblase 1-like
translation: MDSINLPVQNQPGCHLSNETGAIVEMPAPLYSWNCPPGLECLRQVNETLIHQKITFLDVIANSFKRNKYEIKNSLGQMIFFAVEDSSCCSRVCCGSARPFTLRIFNDMEQEVITLERALRCSRCCFPCCLQELNVQAPPGVPIGYVIQIWHPRLPMFIIQNAKRKDVLNISGPCCLWNCCREVNFEIKSVDEDDVVGKISKQSSGFIKEFLVNAGNIAIQFPEDVSETMKVLVLGACFLIDFIFFESRSNLQQFLFL
SIO_010081: LOC101517691
subclass of: SO_0000673
so part of: LOC101517691
location: complement(join(6784531..6784584,6791756..6791917,6795660..6795821,6797250..6797470,6798456..6798498,6800968..6801099))
location: region:6784531-6801099:-1
so has part: feature:6800968-6801099:-1:exon
so has part: feature:6798456-6798498:-1:exon
so has part: feature:6797250-6797470:-1:exon
so has part: feature:6795660-6795821:-1:exon
so has part: feature:6791756-6791917:-1:exon
so has part: feature:6784531-6784584:-1:exon

XP_004597821.2
type: Protein
SIO_000068: ncbiprotein

position:6801099:-1
position: 6801099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6800968-6801099:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6798456-6798498:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6797250-6797470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6795660-6795821:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6791756-6791917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6784531-6784584:-1:exon

LOC101535409
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101535409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6819424..6827886)
location: region:6819424-6827886:-1
so has part: feature:6819424-6827886:-1:exon
subclass of: SO_0000010

101535409
type: Gene
SIO_000068: ncbigene

position:6819424:-1
position: 6819424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6827886:-1
position: 6827886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6819424-6827886:-1:exon

LOC101535409
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101535409
product: phospholipid scramblase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597754.3
SIO_010081: LOC101535409
subclass of: SO_0000673
so part of: LOC101535409
location: complement(join(6819424..6820297,6822307..6822468,6823041..6823202,6823308..6823528,6826488..6826530,6827815..6827886))
location: region:6819424-6827886:-1
so has part: feature:6827815-6827886:-1:exon
so has part: feature:6826488-6826530:-1:exon
so has part: feature:6823308-6823528:-1:exon
so has part: feature:6823041-6823202:-1:exon
so has part: feature:6822307-6822468:-1:exon
so has part: feature:6819424-6820297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6827815-6827886:-1:exon

position:6827815:-1
position: 6827815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6826488-6826530:-1:exon

position:6826488:-1
position: 6826488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6826530:-1
position: 6826530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6823308-6823528:-1:exon

position:6823308:-1
position: 6823308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6823528:-1
position: 6823528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6823041-6823202:-1:exon

position:6823041:-1
position: 6823041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6823202:-1
position: 6823202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6822307-6822468:-1:exon

position:6822307:-1
position: 6822307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6822468:-1
position: 6822468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6819424-6820297:-1:exon

position:6820297:-1
position: 6820297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101535409
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101535409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid scramblase 1
translation: MPAPPVPLNCPPGLEYLTQIDQLLVHQRVELLEALIGFETQNKYEIRNSLGQRVFLAAEDTDCCTRNCCGPSRPFTLRIVDNMGREVMTLERPLRCSSCCFPCCLQEIEIQAPPGVPIGYVTQTWHPCLPKFKIQNEKKEDVLKISGPCIVCSCCADIDFEIKSLDEQSVVGKISKQWTGLLKEVFTDADNFGIQFPLDLDVKMKAVMLGACFLIDFMFFEKTGEQHQRAGIW
SIO_010081: LOC101535409
subclass of: SO_0000673
so part of: LOC101535409
location: complement(join(6820241..6820297,6822307..6822468,6823041..6823202,6823308..6823528,6826488..6826530,6827815..6827871))
location: region:6820241-6827871:-1
so has part: feature:6827815-6827871:-1:exon
so has part: feature:6826488-6826530:-1:exon
so has part: feature:6823308-6823528:-1:exon
so has part: feature:6823041-6823202:-1:exon
so has part: feature:6822307-6822468:-1:exon
so has part: feature:6820241-6820297:-1:exon

XP_004597811.1
type: Protein
SIO_000068: ncbiprotein

position:6820241:-1
position: 6820241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6827871:-1
position: 6827871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6827815-6827871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6826488-6826530:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6823308-6823528:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6823041-6823202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6822307-6822468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6820241-6820297:-1:exon

LOC101517446
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101517446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6846281..6892136)
location: region:6846281-6892136:-1
so has part: feature:6846281-6892136:-1:exon
subclass of: SO_0000010

101517446
type: Gene
SIO_000068: ncbigene

position:6846281:-1
position: 6846281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6892136:-1
position: 6892136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6846281-6892136:-1:exon

LOC101517446
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101517446
product: phospholipid scramblase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012930522.2
SIO_010081: LOC101517446
subclass of: SO_0000673
so part of: LOC101517446
location: complement(join(6846281..6846434,6865508..6865604,6868069..6868230,6891548..6891709,6891823..6892136))
location: region:6846281-6892136:-1
so has part: feature:6891823-6892136:-1:exon
so has part: feature:6891548-6891709:-1:exon
so has part: feature:6868069-6868230:-1:exon
so has part: feature:6865508-6865604:-1:exon
so has part: feature:6846281-6846434:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6891823-6892136:-1:exon

position:6891823:-1
position: 6891823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6891548-6891709:-1:exon

position:6891548:-1
position: 6891548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6891709:-1
position: 6891709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6868069-6868230:-1:exon

position:6868069:-1
position: 6868069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6868230:-1
position: 6868230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6865508-6865604:-1:exon

position:6865508:-1
position: 6865508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6865604:-1
position: 6865604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6846281-6846434:-1:exon

position:6846434:-1
position: 6846434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118758857
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6860947..6919657)
location: region:6860947-6919657:-1
so has part: feature:6860947-6919657:-1:exon
subclass of: SO_0000010

118758857
type: Gene
SIO_000068: ncbigene

position:6860947:-1
position: 6860947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6919657:-1
position: 6919657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6860947-6919657:-1:exon

LOC118758857
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC118758857
product: phospholipid scramblase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036494812.1
SIO_010081: LOC118758857
subclass of: SO_0000673
so part of: LOC118758857
location: complement(join(6860947..6861039,6861206..6861213,6863242..6863284,6864318..6864562,6900447..6900472,6919464..6919657))
location: region:6860947-6919657:-1
so has part: feature:6919464-6919657:-1:exon
so has part: feature:6900447-6900472:-1:exon
so has part: feature:6864318-6864562:-1:exon
so has part: feature:6863242-6863284:-1:exon
so has part: feature:6861206-6861213:-1:exon
so has part: feature:6860947-6861039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6919464-6919657:-1:exon

position:6919464:-1
position: 6919464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6900447-6900472:-1:exon

position:6900447:-1
position: 6900447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6900472:-1
position: 6900472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6864318-6864562:-1:exon

position:6864318:-1
position: 6864318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6864562:-1
position: 6864562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6863242-6863284:-1:exon

position:6863242:-1
position: 6863242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6863284:-1
position: 6863284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6861206-6861213:-1:exon

position:6861206:-1
position: 6861206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6861213:-1
position: 6861213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6860947-6861039:-1:exon

position:6861039:-1
position: 6861039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118758857
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC118758857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid scramblase 2-like
translation: MDKSRSPTHVGYPTAQTHSPDPKTSYPVSQYSSLVPPTDYPAAGPDTIPVQVQPRYIQPGAVTEVQWMQAPARPLNCPPGLEYLMQIDQVLVHQEVSIVEVFGGLTLEGAEFSQEDPGLDEAPVAMPFHLCRF
SIO_010081: LOC118758857
subclass of: SO_0000673
so part of: LOC118758857
location: complement(join(6860947..6861039,6861206..6861213,6863242..6863284,6864318..6864562,6900447..6900459))
location: region:6860947-6900459:-1
so has part: feature:6900447-6900459:-1:exon
so has part: feature:6864318-6864562:-1:exon
so has part: feature:6863242-6863284:-1:exon
so has part: feature:6861206-6861213:-1:exon
so has part: feature:6860947-6861039:-1:exon

XP_036350705.1
type: Protein
SIO_000068: ncbiprotein

position:6900459:-1
position: 6900459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6900447-6900459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6864318-6864562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6863242-6863284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6861206-6861213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6860947-6861039:-1:exon

LOC101517446
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101517446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid scramblase 1-like
translation: MRILDHMGQEVITMERPLKCACCCSPCCLQKIEIQAPRGVPIGYVAQIWHPFLPKFKIQNEKKEDVLKICGPFFVCNCGGDVDFHIKSLDEASVIGRISKQWSGCMKEMLTDADSYEIHFPLDLDVKVKAVLLGACLLIDFMFFESCAGLQPIIGVW
SIO_010081: LOC101517446
subclass of: SO_0000673
so part of: LOC101517446
location: complement(join(6865548..6865604,6868069..6868230,6891548..6891709,6891823..6891915))
location: region:6865548-6891915:-1
so has part: feature:6891823-6891915:-1:exon
so has part: feature:6891548-6891709:-1:exon
so has part: feature:6868069-6868230:-1:exon
so has part: feature:6865548-6865604:-1:exon

XP_012785976.2
type: Protein
SIO_000068: ncbiprotein

position:6865548:-1
position: 6865548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6891915:-1
position: 6891915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6891823-6891915:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6891548-6891709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6868069-6868230:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6865548-6865604:-1:exon

PLSCR5
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PLSCR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6972754..6999730)
location: region:6972754-6999730:-1
so has part: feature:6972754-6999730:-1:exon
subclass of: SO_0000010

101532909
type: Gene
SIO_000068: ncbigene

position:6972754:-1
position: 6972754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6999730:-1
position: 6999730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6972754-6999730:-1:exon

PLSCR5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PLSCR5
product: phospholipid scramblase family member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins
transcript id: XM_004598813.1
SIO_010081: PLSCR5
subclass of: SO_0000673
so part of: PLSCR5
location: complement(join(6972754..6972857,6972945..6973027,6986302..6986463,6988320..6988481,6990276..6990496,6991982..6992024,6996511..6996692,6999718..6999730))
location: region:6972754-6999730:-1
so has part: feature:6999718-6999730:-1:exon
so has part: feature:6996511-6996692:-1:exon
so has part: feature:6991982-6992024:-1:exon
so has part: feature:6990276-6990496:-1:exon
so has part: feature:6988320-6988481:-1:exon
so has part: feature:6986302-6986463:-1:exon
so has part: feature:6972945-6973027:-1:exon
so has part: feature:6972754-6972857:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6999718-6999730:-1:exon

position:6999718:-1
position: 6999718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6996511-6996692:-1:exon

position:6996511:-1
position: 6996511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6996692:-1
position: 6996692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6991982-6992024:-1:exon

position:6991982:-1
position: 6991982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6992024:-1
position: 6992024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6990276-6990496:-1:exon

position:6990276:-1
position: 6990276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6990496:-1
position: 6990496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6988320-6988481:-1:exon

position:6988320:-1
position: 6988320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6988481:-1
position: 6988481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6986302-6986463:-1:exon

position:6986302:-1
position: 6986302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6986463:-1
position: 6986463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6972945-6973027:-1:exon

position:6972945:-1
position: 6972945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6973027:-1
position: 6973027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6972754-6972857:-1:exon

position:6972857:-1
position: 6972857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLSCR5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PLSCR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid scramblase family member 5
translation: MASKDAHHQRNAALRGFLPGAPDPHQSQHASSSNPASLGWQPGDPPPNGFLPTVSLPPGLDYLSQLDLIIIHQQVELLGMILGTETANKYEIKNGLGQRIYFAVEESICFNRSFCSTLRSCTLRITDNSGQEVITVNRPLRCNSCWCPCYLQELEIQAPPGTVVGYVAQKWDPFLPKFTIQNANREDILNIVGPCTTCGCFGDVDFEIKTINEKLTIGKISKYWSGFVNDVFTNANNFGIHVPADLDVRVKAAMIGACFLFDFMFFEHSLAGL
SIO_010081: PLSCR5
subclass of: SO_0000673
so part of: PLSCR5
location: complement(join(6972989..6973027,6986302..6986463,6988320..6988481,6990276..6990496,6991982..6992024,6996511..6996692,6999718..6999730))
location: region:6972989-6999730:-1
so has part: feature:6999718-6999730:-1:exon
so has part: feature:6996511-6996692:-1:exon
so has part: feature:6991982-6992024:-1:exon
so has part: feature:6990276-6990496:-1:exon
so has part: feature:6988320-6988481:-1:exon
so has part: feature:6986302-6986463:-1:exon
so has part: feature:6972989-6973027:-1:exon

XP_004598870.1
type: Protein
SIO_000068: ncbiprotein

position:6972989:-1
position: 6972989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6999718-6999730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6996511-6996692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6991982-6992024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6990276-6990496:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6988320-6988481:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6986302-6986463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6972989-6973027:-1:exon

LOC101532663
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101532663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7335219..7336293
location: region:7335219-7336293:1
so has part: feature:7335219-7336293:1:exon

101532663
type: Gene
SIO_000068: ncbigene

position:7335219:1
position: 7335219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7336293:1
position: 7336293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7335219-7336293:1:exon

LOC101532663
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101532663
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC101532663
subclass of: SO_0000673
so part of: LOC101532663
location: 7335219..7336293
location: region:7335219-7336293:1
so has part: feature:7335219-7336293:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7335219-7336293:1:exon

LOC101533862
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101533862
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7430414..7505632)
location: region:7430414-7505632:-1
so has part: feature:7430414-7505632:-1:exon

101533862
type: Gene
SIO_000068: ncbigene

position:7430414:-1
position: 7430414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7505632:-1
position: 7505632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7430414-7505632:-1:exon

LOC101533862
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101533862
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC101533862
subclass of: SO_0000673
so part of: LOC101533862
location: complement(7430414..7431169)
location: region:7430414-7431169:-1
so has part: feature:7430414-7431169:-1:exon

position:7431169:-1
position: 7431169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7430414-7431169:-1:exon

LOC101533862
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101533862
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC101533862
subclass of: SO_0000673
so part of: LOC101533862
location: complement(7504308..7504402)
location: region:7504308-7504402:-1
so has part: feature:7504308-7504402:-1:exon

position:7504308:-1
position: 7504308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7504402:-1
position: 7504402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7504308-7504402:-1:exon

LOC101533862
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101533862
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC101533862
subclass of: SO_0000673
so part of: LOC101533862
location: complement(7505435..7505632)
location: region:7505435-7505632:-1
so has part: feature:7505435-7505632:-1:exon

position:7505435:-1
position: 7505435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7505435-7505632:-1:exon

ZIC4
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ZIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7681717..7696639)
location: region:7681717-7696639:-1
so has part: feature:7681717-7696639:-1:exon
subclass of: SO_0000010

101532424
type: Gene
SIO_000068: ncbigene

position:7681717:-1
position: 7681717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7696639:-1
position: 7696639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7681717-7696639:-1:exon

ZIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ZIC4
product: Zic family member 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 Proteins
transcript id: XM_036494790.1
SIO_010081: ZIC4
subclass of: SO_0000673
so part of: ZIC4
location: complement(join(7681717..7682029,7684012..7684330,7688803..7689420,7695287..7695371,7696504..7696639))
location: region:7681717-7696639:-1
so has part: feature:7696504-7696639:-1:exon
so has part: feature:7695287-7695371:-1:exon
so has part: feature:7688803-7689420:-1:exon
so has part: feature:7684012-7684330:-1:exon
so has part: feature:7681717-7682029:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7696504-7696639:-1:exon

position:7696504:-1
position: 7696504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7695287-7695371:-1:exon

position:7695287:-1
position: 7695287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7695371:-1
position: 7695371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7688803-7689420:-1:exon

position:7688803:-1
position: 7688803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7689420:-1
position: 7689420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7684012-7684330:-1:exon

position:7684012:-1
position: 7684012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7684330:-1
position: 7684330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7681717-7682029:-1:exon

position:7682029:-1
position: 7682029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ZIC4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein ZIC 4
translation: MLPFCRNAKLGLLSFLISAGMSSLPLGKDAFWLERIENHKILWEKAQNQKMRYKTSLVMRKRLRLYRNTLKESSSISGHHGPQVSAASCPSVFSGLHEQPPQASPSRPLNGLLHLGLPGDMYARPETFAPGPAARSDALAAAAALHGYGGMNLTVNLTAPHGPGAFFRYMRQPIKQELICKWLAADGPAPPRLCSKTFSTMHELVTHVTVEHVGGPEQSNHICFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFRCEFEGCERRFANSSDRKKHSHVHTSDKPYTCKVRGCDKCYTHPSSLRKHMKVHGRSPPPSSGYDSATPSALVSPSSDCGHEPPPVASSAAVAARGTDLSA
SIO_010081: ZIC4
subclass of: SO_0000673
so part of: ZIC4
location: complement(join(7682029,7684012..7684330,7688803..7689420,7695287..7695371,7696504..7696639))
location: region:7682029-7696639:-1
so has part: feature:7696504-7696639:-1:exon
so has part: feature:7695287-7695371:-1:exon
so has part: feature:7688803-7689420:-1:exon
so has part: feature:7684012-7684330:-1:exon
so has part: feature:7682029-7682029:-1:exon

XP_036350683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7696504-7696639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7695287-7695371:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7688803-7689420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7684012-7684330:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7682029-7682029:-1:exon

ZIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ZIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7702537..7706206
location: region:7702537-7706206:1
so has part: feature:7702537-7706206:1:exon
subclass of: SO_0000010

101532183
type: Gene
SIO_000068: ncbigene

position:7702537:1
position: 7702537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7706206:1
position: 7706206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7702537-7706206:1:exon

ZIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ZIC1
product: Zic family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 19 Proteins
transcript id: XM_004598811.1
SIO_010081: ZIC1
subclass of: SO_0000673
so part of: ZIC1
location: join(7702537..7703585,7705093..7705256,7705919..7706206)
location: region:7702537-7706206:1
so has part: feature:7702537-7703585:1:exon
so has part: feature:7705093-7705256:1:exon
so has part: feature:7705919-7706206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7702537-7703585:1:exon

position:7703585:1
position: 7703585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7705093-7705256:1:exon

position:7705093:1
position: 7705093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7705256:1
position: 7705256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7705919-7706206:1:exon

position:7705919:1
position: 7705919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ZIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 1
translation: MLLDAGPQYPAIGVTTFGASRHHSAGDVAERDVGLGINPFADGMGAFKLNPSSHELASAGQTAFTSQAPGYAAAAALGHHHHPGHVGSYSSAAFNSTRDFLFRNRGFGDAAAAASAQHSLFAASAGGFGGPHGHTDAAGHLLFPGLHEQAAGHASPNVVNGQMRLGFSGDMYPRPEQYGQVTSPRSEHYAAPQLHGYGPMNVNMAAHHGAGAFFRYMRQPIKQELICKWIEPEQLANPKKSCNKTFSTMHELVTHVTVEHVGGPEQSNHICFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSYTHPSSLRKHMKVHESSSQGSQPSPAASSGYESSTPPTIVSPSTDNPTTSSLSPSSSAVHHTAGHGALSSNFNEWYV
SIO_010081: ZIC1
subclass of: SO_0000673
so part of: ZIC1
location: join(7702604..7703585,7705093..7705256,7705919..7706116)
location: region:7702604-7706116:1
so has part: feature:7702604-7703585:1:exon
so has part: feature:7705093-7705256:1:exon
so has part: feature:7705919-7706116:1:exon

XP_004598868.1
type: Protein
SIO_000068: ncbiprotein

position:7702604:1
position: 7702604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7706116:1
position: 7706116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7702604-7703585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7705093-7705256:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7705919-7706116:1:exon

AGTR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: AGTR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8857768..8858891
location: region:8857768-8858891:1
so has part: feature:8857768-8858891:1:exon
subclass of: SO_0000010

101531941
type: Gene
SIO_000068: ncbigene

position:8857768:1
position: 8857768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8858891:1
position: 8858891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8857768-8858891:1:exon

AGTR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: AGTR1
product: angiotensin II receptor type 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 25 Proteins
transcript id: XM_004598810.2
SIO_010081: AGTR1
subclass of: SO_0000673
so part of: AGTR1
location: 8857768..8858891
location: region:8857768-8858891:1
so has part: feature:8857768-8858891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8857768-8858891:1:exon

AGTR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: AGTR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type-1 angiotensin II receptor
translation: MILNSTTEDGIKRIQDDCPKAGRHNYIFIMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLSIDRYLAIVHPMKSRLRRTMLVAKVTCIIIWLLAGLASLPAVIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLFPFLIILTSYTLIWKALKKAYEIQKNKPRNDDIFKIIMAIVLFFFFSWVPHQIFTFLDVLIQLGVIHDCKIADIVDTAMPITICIAYFNNCLNPLFYGFLGKKFKKYFLQLLKYIPPKAKSHSNLSTKMSTLSYRPSDNVSSSTKKPMPCFEVE
SIO_010081: AGTR1
subclass of: SO_0000673
so part of: AGTR1
location: 8857786..8858865
location: region:8857786-8858865:1
so has part: feature:8857786-8858865:1:exon

XP_004598867.1
type: Protein
SIO_000068: ncbiprotein

position:8857786:1
position: 8857786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8858865:1
position: 8858865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8857786-8858865:1:exon

CPB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CPB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8921532..8959029
location: region:8921532-8959029:1
so has part: feature:8921532-8959029:1:exon
subclass of: SO_0000010

101533613
type: Gene
SIO_000068: ncbigene

position:8921532:1
position: 8921532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8959029:1
position: 8959029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8921532-8959029:1:exon

CPB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CPB1
product: carboxypeptidase B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004598814.2
SIO_010081: CPB1
subclass of: SO_0000673
so part of: CPB1
location: join(8921532..8921627,8922164..8922231,8929085..8929160,8933254..8933378,8940184..8940283,8940369..8940470,8941313..8941414,8943568..8943678,8943767..8943857,8944424..8944626,8955946..8956030,8958672..8959029)
location: region:8921532-8959029:1
so has part: feature:8921532-8921627:1:exon
so has part: feature:8922164-8922231:1:exon
so has part: feature:8929085-8929160:1:exon
so has part: feature:8933254-8933378:1:exon
so has part: feature:8940184-8940283:1:exon
so has part: feature:8940369-8940470:1:exon
so has part: feature:8941313-8941414:1:exon
so has part: feature:8943568-8943678:1:exon
so has part: feature:8943767-8943857:1:exon
so has part: feature:8944424-8944626:1:exon
so has part: feature:8955946-8956030:1:exon
so has part: feature:8958672-8959029:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8921532-8921627:1:exon

position:8921627:1
position: 8921627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8922164-8922231:1:exon

position:8922164:1
position: 8922164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8922231:1
position: 8922231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8929085-8929160:1:exon

position:8929085:1
position: 8929085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8929160:1
position: 8929160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8933254-8933378:1:exon

position:8933254:1
position: 8933254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8933378:1
position: 8933378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8940184-8940283:1:exon

position:8940184:1
position: 8940184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8940283:1
position: 8940283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8940369-8940470:1:exon

position:8940369:1
position: 8940369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8940470:1
position: 8940470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8941313-8941414:1:exon

position:8941313:1
position: 8941313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8941414:1
position: 8941414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8943568-8943678:1:exon

position:8943568:1
position: 8943568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8943678:1
position: 8943678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8943767-8943857:1:exon

position:8943767:1
position: 8943767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8943857:1
position: 8943857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8944424-8944626:1:exon

position:8944424:1
position: 8944424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8944626:1
position: 8944626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8955946-8956030:1:exon

position:8955946:1
position: 8955946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8956030:1
position: 8956030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8958672-8959029:1:exon

position:8958672:1
position: 8958672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CPB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase B
translation: MPTMPINNDEQVKSMKTYTCISKRQNEKPAKKDSFVEFQTPQIQPEQALVVGDVHEKVLRVNVEDETHINLIQELASINQIDFWKPDSASQISPHSAVDFRVKAEDIDSVENFLNQNELQYEVLIDNLKHVLEEQFDSQVRATGHSYVKYNNWDTIEAWTKEVAAQNPNLISRSVLGTTFEGRSIYVLKVGKSKSNKPAIFLDCGFHAREWISPAFCQWFVKEAINNYGKDTVTTELLDELDFYVVPVVNIDGYIYTWTKNRMWRKTRSTKSGTSCVGVDPNRNFDAGWCQLGASSSACDETYCGSAPESEKETKALADFIRNNLSSIKAYLTIHSYSQLLLYPYSYSYKLPSNNAELNALAKAAVQKLTALYGTKYTYGPGATTIYPAAGGSDDWAYDQGIKYSFTFELRDTGRYGFALPESQIQATCEETLLAVNHIASYVLDNLY
SIO_010081: CPB1
subclass of: SO_0000673
so part of: CPB1
location: join(8921532..8921627,8922164..8922231,8929085..8929160,8933254..8933378,8940184..8940283,8940369..8940470,8941313..8941414,8943568..8943678,8943767..8943857,8944424..8944626,8955946..8956030,8958672..8958859)
location: region:8921532-8958859:1
so has part: feature:8921532-8921627:1:exon
so has part: feature:8922164-8922231:1:exon
so has part: feature:8929085-8929160:1:exon
so has part: feature:8933254-8933378:1:exon
so has part: feature:8940184-8940283:1:exon
so has part: feature:8940369-8940470:1:exon
so has part: feature:8941313-8941414:1:exon
so has part: feature:8943568-8943678:1:exon
so has part: feature:8943767-8943857:1:exon
so has part: feature:8944424-8944626:1:exon
so has part: feature:8955946-8956030:1:exon
so has part: feature:8958672-8958859:1:exon

XP_004598871.1
type: Protein
SIO_000068: ncbiprotein

position:8958859:1
position: 8958859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8921532-8921627:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8922164-8922231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8929085-8929160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8933254-8933378:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8940184-8940283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8940369-8940470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8941313-8941414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8943568-8943678:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8943767-8943857:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8944424-8944626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8955946-8956030:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8958672-8958859:1:exon

LOC101533384
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101533384
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8963251..8963508
location: region:8963251-8963508:1
so has part: feature:8963251-8963508:1:exon

101533384
type: Gene
SIO_000068: ncbigene

position:8963251:1
position: 8963251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8963508:1
position: 8963508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8963251-8963508:1:exon

LOC101533384
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101533384
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC101533384
subclass of: SO_0000673
so part of: LOC101533384
location: 8963251..8963508
location: region:8963251-8963508:1
so has part: feature:8963251-8963508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8963251-8963508:1:exon

CPA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CPA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <8965358..8987186
location: region:8965358-8987186:1
so has part: feature:8965358-8987186:1:exon
subclass of: SO_0000010

101533146
type: Gene
SIO_000068: ncbigene

position:8965358:1
position: 8965358
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:8987186:1
position: 8987186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8965358-8987186:1:exon

CPA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CPA3
product: carboxypeptidase A3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_004600002.1
SIO_010081: CPA3
subclass of: SO_0000673
so part of: CPA3
location: join(<8965358..8965494,8978234..8978336,8978431..8978532,8979518..8979673,8980909..8980993,8986999..8987186)
location: region:8965358-8987186:1
so has part: feature:8965358-8965494:1:exon
so has part: feature:8978234-8978336:1:exon
so has part: feature:8978431-8978532:1:exon
so has part: feature:8979518-8979673:1:exon
so has part: feature:8980909-8980993:1:exon
so has part: feature:8986999-8987186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8965358-8965494:1:exon

position:8965494:1
position: 8965494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8978234-8978336:1:exon

position:8978234:1
position: 8978234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8978336:1
position: 8978336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8978431-8978532:1:exon

position:8978431:1
position: 8978431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8978532:1
position: 8978532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8979518-8979673:1:exon

position:8979518:1
position: 8979518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8979673:1
position: 8979673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8980909-8980993:1:exon

position:8980909:1
position: 8980909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8980993:1
position: 8980993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8986999-8987186:1:exon

position:8986999:1
position: 8986999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CPA3
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:8965430..8965432,aa:OTHER)
product: LOW QUALITY PROTEIN: mast cell carboxypeptidase A
translation: SSLQLDFWHPDASHHVAANMTVDFXVREKDLQPIQSALDQNDTYYEILIPDLQREIERQFDVKEATLGSHSYAKYNNWDKIVAWTEKMAYKHPKMVSRIKIGSTAEDNPIYVLKIGENEGKRKAIFMDCGIHARGWVSPAFCQWFVYQVSESEQEKSQPHSPVRPQAKVAKMGTKALSTLYETRYICGPIASMLYPTSGNSLNWAYKMGIKYTFAFELRDGGRFGFLFPEFQLKSTCKETMLAVKSIVKYVLKHAT
SIO_010081: CPA3
subclass of: SO_0000673
so part of: CPA3
location: join(<8965358..8965494,8978234..8978336,8978431..8978532,8979518..8979673,8980909..8980993,8986999..8987186)
location: region:8965358-8987186:1
so has part: feature:8965358-8965494:1:exon
so has part: feature:8978234-8978336:1:exon
so has part: feature:8978431-8978532:1:exon
so has part: feature:8979518-8979673:1:exon
so has part: feature:8980909-8980993:1:exon
so has part: feature:8986999-8987186:1:exon

XP_004600059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8965358-8965494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8978234-8978336:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8978431-8978532:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8979518-8979673:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8980909-8980993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8986999-8987186:1:exon

BCHE
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: BCHE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9421252..9461569
location: region:9421252-9461569:1
so has part: feature:9421252-9461569:1:exon
subclass of: SO_0000010

101519650
type: Gene
SIO_000068: ncbigene

position:9421252:1
position: 9421252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9461569:1
position: 9461569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9421252-9461569:1:exon

BCHE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: BCHE
product: butyrylcholinesterase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004598348.2
SIO_010081: BCHE
subclass of: SO_0000673
so part of: BCHE
location: join(9421252..9422768,9451185..9451351,9460595..9461569)
location: region:9421252-9461569:1
so has part: feature:9421252-9422768:1:exon
so has part: feature:9451185-9451351:1:exon
so has part: feature:9460595-9461569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9421252-9422768:1:exon

position:9422768:1
position: 9422768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9451185-9451351:1:exon

position:9451185:1
position: 9451185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9451351:1
position: 9451351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9460595-9461569:1:exon

position:9460595:1
position: 9460595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BCHE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: BCHE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cholinesterase
translation: MQNQDTIIYIRFLLWLVLFFMVIQKAHSEEDVIITTRNGKIRGMSVPVLGGTVTAFLGVPYAQPPLGRLRFKKPQSLTKWSGIWNATKYANSCYQNIDQSFPGFHGSEMWNPNTDLSEDCLYLNVWVPTPKPKNATVMIWIYGGGFQTGTSSLPVYDGKFLTRVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSITLFGESAGAVSVGLHLLSPRSQPLFTRAILQSGSSNAPWAAMSLHEARNRTFTLARFVGCSRENETEIIKCLRSKDAQEILLNEVFVVPFDTLLSVNFGPTVDGDFLTDMPETLLQVGQFKKTQILLGVNKDEGTAFLVYGAPGFSKDNNSIITRKEFQDGLNIFFPSVSEFGKESILFHYADWLDDQRPENYREALDDVVGDYNIICPALEFAEKCSEMGSSAYFYYFEHRSSKLPWPEWMGVMHGYEIEFVFGLPLERRANYTKAEEVLSRSIMKHWASFAKYGYPNGTQNNGITWPLFKSAEQKYLTLNTESPRIHTKPRSQQCRFWKVFFPRVLEMTGNIDEAEQEWKAGFHRWNSYMMDWKSHFNDYTSRKESCAGI
SIO_010081: BCHE
subclass of: SO_0000673
so part of: BCHE
location: join(9421252..9422768,9451185..9451351,9460595..9460719)
location: region:9421252-9460719:1
so has part: feature:9421252-9422768:1:exon
so has part: feature:9451185-9451351:1:exon
so has part: feature:9460595-9460719:1:exon

XP_004598405.1
type: Protein
SIO_000068: ncbiprotein

position:9460719:1
position: 9460719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9421252-9422768:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9451185-9451351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9460595-9460719:1:exon

SLITRK3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SLITRK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9822674..9825616
location: region:9822674-9825616:1
so has part: feature:9822674-9825616:1:exon
subclass of: SO_0000010

101519899
type: Gene
SIO_000068: ncbigene

position:9822674:1
position: 9822674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9825616:1
position: 9825616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9822674-9825616:1:exon

SLITRK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SLITRK3
product: SLIT and NTRK like family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_004598349.1
SIO_010081: SLITRK3
subclass of: SO_0000673
so part of: SLITRK3
location: 9822674..9825616
location: region:9822674-9825616:1
so has part: feature:9822674-9825616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9822674-9825616:1:exon

SLITRK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SLITRK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SLIT and NTRK-like protein 3
translation: MMNPSVAEMLHRGRMLWIILLSTIALGWTTPIPLIEDSEEIDEPCFDPCYCEVKESLFHIHCDSKGFTNISQITEFWSRPFKLYLQKNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAVSLTHLDLRGNRLKVLFYRGMLDHIGRSLMELQLEENPWNCTCEIVQLKSWLERIPYTALVGDITCETPFHFHGKDLREIRKTELCPLLSDSEVEASLGIPHLTSNKENAWPTKPSSMLSSVHFTASSVEYKSSNKQPKPTKQPRTPRPPSTSQALYPGPNQPPIAPYQTRPPIPIICPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGTSLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCMSPDNLTHRDVRTIELEVLCPEMLHVAPAGASPAQPGDSHLGGPTSASPYEFSPPGGPLPLSVLILSLLVLFFSAVFVAAGLFAYVLRRRRKKLPFRSKRQEGVDLTGIQMQCHRLFDDGGGGSGGGGGNGGGGRPTLSSPEKAPPVGHVYEYIPHPVTQMCNNPIYKPREEEEVAVSAGQEAGGAERGGPGTQPPGRSEVVLGSEQFAETPEEGRGNCRTLLEKEKEWALAVSGCQLSTIVTVNHHHPHHPAVGGVSGVVGGSGGDLAGFRHREKNGGVVLFPPGGGCAGGSMLLDRDRPQPAPCTVGFVDCLYGTVPKLKELHVHPPGMQYPDLQQDARLKETLLFSAGKGFTDHQTPKSDYLELRAKLQTKPDYLEVLEKTTYRF
SIO_010081: SLITRK3
subclass of: SO_0000673
so part of: SLITRK3
location: 9822674..9825616
location: region:9822674-9825616:1
so has part: feature:9822674-9825616:1:exon

XP_004598406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9822674-9825616:1:exon

LOC118758965
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758965
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(9853701..9853805)
location: region:9853701-9853805:-1
so has part: feature:9853701-9853805:-1:exon
subclass of: SO_0000623

118758965
type: Gene
SIO_000068: ncbigene

position:9853701:-1
position: 9853701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9853805:-1
position: 9853805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9853701-9853805:-1:exon

LOC118758965
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758965
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995905.1
SIO_010081: LOC118758965
subclass of: SO_0000673
so part of: LOC118758965
location: complement(9853701..9853805)
location: region:9853701-9853805:-1
so has part: feature:9853701-9853805:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9853701-9853805:-1:exon

SI
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9905663..9973311
location: region:9905663-9973311:1
so has part: feature:9905663-9973311:1:exon
subclass of: SO_0000010

101520389
type: Gene
SIO_000068: ncbigene

position:9905663:1
position: 9905663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9973311:1
position: 9973311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9905663-9973311:1:exon

SI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SI
product: sucrase-isomaltase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_004598350.1
SIO_010081: SI
subclass of: SO_0000673
so part of: SI
location: join(9905663..9905780,9907098..9907177,9912203..9912354,9913602..9913773,9915109..9915208,9916091..9916203,9917739..9917864,9918489..9918620,9918708..9918827,9920864..9920977,9923261..9923345,9924031..9924148,9924578..9924749,9928482..9928598,9930363..9930517,9931298..9931382,9932648..9932704,9933252..9933376,9938124..9938212,9940230..9940279,9940968..9941138,9942255..9942410,9945932..9946138,9948169..9948323,9949631..9949799,9950311..9950407,9950499..9950611,9950699..9950824,9952217..9952345,9953517..9953627,9955844..9955906,9956571..9956687,9957777..9957864,9958991..9959129,9959756..9959889,9960823..9960857,9960942..9961058,9962701..9962849,9966570..9966654,9966738..9966794,9967415..9967539,9969621..9969709,9971392..9971441,9971629..9971796,9973243..9973311)
location: region:9905663-9973311:1
so has part: feature:9905663-9905780:1:exon
so has part: feature:9907098-9907177:1:exon
so has part: feature:9912203-9912354:1:exon
so has part: feature:9913602-9913773:1:exon
so has part: feature:9915109-9915208:1:exon
so has part: feature:9916091-9916203:1:exon
so has part: feature:9917739-9917864:1:exon
so has part: feature:9918489-9918620:1:exon
so has part: feature:9918708-9918827:1:exon
so has part: feature:9920864-9920977:1:exon
so has part: feature:9923261-9923345:1:exon
so has part: feature:9924031-9924148:1:exon
so has part: feature:9924578-9924749:1:exon
so has part: feature:9928482-9928598:1:exon
so has part: feature:9930363-9930517:1:exon
so has part: feature:9931298-9931382:1:exon
so has part: feature:9932648-9932704:1:exon
so has part: feature:9933252-9933376:1:exon
so has part: feature:9938124-9938212:1:exon
so has part: feature:9940230-9940279:1:exon
so has part: feature:9940968-9941138:1:exon
so has part: feature:9942255-9942410:1:exon
so has part: feature:9945932-9946138:1:exon
so has part: feature:9948169-9948323:1:exon
so has part: feature:9949631-9949799:1:exon
so has part: feature:9950311-9950407:1:exon
so has part: feature:9950499-9950611:1:exon
so has part: feature:9950699-9950824:1:exon
so has part: feature:9952217-9952345:1:exon
so has part: feature:9953517-9953627:1:exon
so has part: feature:9955844-9955906:1:exon
so has part: feature:9956571-9956687:1:exon
so has part: feature:9957777-9957864:1:exon
so has part: feature:9958991-9959129:1:exon
so has part: feature:9959756-9959889:1:exon
so has part: feature:9960823-9960857:1:exon
so has part: feature:9960942-9961058:1:exon
so has part: feature:9962701-9962849:1:exon
so has part: feature:9966570-9966654:1:exon
so has part: feature:9966738-9966794:1:exon
so has part: feature:9967415-9967539:1:exon
so has part: feature:9969621-9969709:1:exon
so has part: feature:9971392-9971441:1:exon
so has part: feature:9971629-9971796:1:exon
so has part: feature:9973243-9973311:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9905663-9905780:1:exon

position:9905780:1
position: 9905780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9907098-9907177:1:exon

position:9907098:1
position: 9907098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9907177:1
position: 9907177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9912203-9912354:1:exon

position:9912203:1
position: 9912203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9912354:1
position: 9912354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9913602-9913773:1:exon

position:9913602:1
position: 9913602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9913773:1
position: 9913773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9915109-9915208:1:exon

position:9915109:1
position: 9915109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9915208:1
position: 9915208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9916091-9916203:1:exon

position:9916091:1
position: 9916091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9916203:1
position: 9916203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9917739-9917864:1:exon

position:9917739:1
position: 9917739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9917864:1
position: 9917864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9918489-9918620:1:exon

position:9918489:1
position: 9918489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9918620:1
position: 9918620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9918708-9918827:1:exon

position:9918708:1
position: 9918708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9918827:1
position: 9918827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9920864-9920977:1:exon

position:9920864:1
position: 9920864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9920977:1
position: 9920977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9923261-9923345:1:exon

position:9923261:1
position: 9923261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9923345:1
position: 9923345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9924031-9924148:1:exon

position:9924031:1
position: 9924031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9924148:1
position: 9924148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9924578-9924749:1:exon

position:9924578:1
position: 9924578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9924749:1
position: 9924749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9928482-9928598:1:exon

position:9928482:1
position: 9928482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9928598:1
position: 9928598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9930363-9930517:1:exon

position:9930363:1
position: 9930363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9930517:1
position: 9930517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9931298-9931382:1:exon

position:9931298:1
position: 9931298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9931382:1
position: 9931382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9932648-9932704:1:exon

position:9932648:1
position: 9932648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9932704:1
position: 9932704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9933252-9933376:1:exon

position:9933252:1
position: 9933252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9933376:1
position: 9933376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9938124-9938212:1:exon

position:9938124:1
position: 9938124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9938212:1
position: 9938212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9940230-9940279:1:exon

position:9940230:1
position: 9940230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9940279:1
position: 9940279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9940968-9941138:1:exon

position:9940968:1
position: 9940968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9941138:1
position: 9941138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:9942255-9942410:1:exon

position:9942255:1
position: 9942255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9942410:1
position: 9942410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:9945932-9946138:1:exon

position:9945932:1
position: 9945932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9946138:1
position: 9946138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:9948169-9948323:1:exon

position:9948169:1
position: 9948169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9948323:1
position: 9948323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:9949631-9949799:1:exon

position:9949631:1
position: 9949631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9949799:1
position: 9949799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:9950311-9950407:1:exon

position:9950311:1
position: 9950311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9950407:1
position: 9950407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:9950499-9950611:1:exon

position:9950499:1
position: 9950499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9950611:1
position: 9950611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:9950699-9950824:1:exon

position:9950699:1
position: 9950699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9950824:1
position: 9950824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:9952217-9952345:1:exon

position:9952217:1
position: 9952217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9952345:1
position: 9952345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:9953517-9953627:1:exon

position:9953517:1
position: 9953517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9953627:1
position: 9953627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:9955844-9955906:1:exon

position:9955844:1
position: 9955844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9955906:1
position: 9955906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:9956571-9956687:1:exon

position:9956571:1
position: 9956571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9956687:1
position: 9956687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:9957777-9957864:1:exon

position:9957777:1
position: 9957777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9957864:1
position: 9957864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:9958991-9959129:1:exon

position:9958991:1
position: 9958991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9959129:1
position: 9959129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:9959756-9959889:1:exon

position:9959756:1
position: 9959756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9959889:1
position: 9959889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:9960823-9960857:1:exon

position:9960823:1
position: 9960823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9960857:1
position: 9960857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:9960942-9961058:1:exon

position:9960942:1
position: 9960942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9961058:1
position: 9961058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:9962701-9962849:1:exon

position:9962701:1
position: 9962701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9962849:1
position: 9962849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:9966570-9966654:1:exon

position:9966570:1
position: 9966570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9966654:1
position: 9966654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:9966738-9966794:1:exon

position:9966738:1
position: 9966738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9966794:1
position: 9966794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:9967415-9967539:1:exon

position:9967415:1
position: 9967415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9967539:1
position: 9967539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:9969621-9969709:1:exon

position:9969621:1
position: 9969621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9969709:1
position: 9969709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:9971392-9971441:1:exon

position:9971392:1
position: 9971392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9971441:1
position: 9971441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:9971629-9971796:1:exon

position:9971629:1
position: 9971629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9971796:1
position: 9971796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:9973243-9973311:1:exon

position:9973243:1
position: 9973243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sucrase-isomaltase, intestinal
translation: MAKKKFSALEITLIVLFAIVTIIAIALIVVLATNTPAVEDTAVCPAEQNDPVNERINCIPEQSPTQLTDANNARYEVPHQYVTEFTGPAATNTLYDVAVTENPFSIRVVRRSNGKVLFDTSVGPLVYSDQYLQISTRLPSEYMYGLGEHVHKRFRHDLYWKTWPIFTRDQDTADHTNNLYGHQTFFMCIEDTTGNSFGVFLMNSNAMEVFIQPTPIVTYRVIGGILDFYIFVGDTPEQVVQQYQELIGRPAMPAYWSLGFQLSRWNYNSLDVVKAVVERNRAARIPYDTQVSDIDYMEDKKDFTYDQTAYSGLPEFVQDLHDHGQKYVIILDPAISVGRRADGTAYLPYDRGSAQHVWVNESDGTTPLVGEVWPGVTVYPDFTSESCRTWWANECNIFHGEVEYDGLWIDMNEVSNFVQGSNQGCSDNTLNYPPYTPDILDKLLYSKTLCMDAVQAWGRQYDVHSLYGYSMAIATERAVETVFPGKRSFILTRSTFAGSGRHAAHWLGDNHATWEQMEWSITGILEFGLFGMPLVGADICGFQDETTEELCRRWMQLGAFYPFSRNHNADGFEHQDPAFFGQDSLLVQSSRHYLNIRYTLLPFLYTLFYKAHRYGETVARPVLHEFYQDTNSWVEDLEFLWGPALLITPVLTQGAETVSAYIPDAVWYDYETGARRPWRGQRVEMSLPADKIGLHLRGGYIIPTQEPDVTTTASRLNPLGLIIALDDNNAATGDFFWDDGETKGTIEDGTYIFYTFSVSDNTLVATCTQSSYPEGESLAFETVKVLGLTQTVNEVSVGVNEQAMNTHNNFTYDPSNQVLLINGLSFNLGTSFRIQWNQIFLPTEKITCYPDADLATQQKCVARGCIWNQDTVNSQEPECYLPVDHNPYSVTSIQYSPTGITADLQYNAASARVTLPSVSISTLRVEVKYHKNEMVQFKIFDPQNKRYEVPVPLDIPATPTSSQQNRLYDVEIKENPFGIQIRRRSTGKVIWDSCLPGFAFNDQFIQISTRLPSQYIYGFGEVEHPTFKHDLNWHTWGMFTRDQPPGYKLNSYGFHPYHMTLEDDGYAHGVLLLNSNAMDVTFMPTPGLTYRVIGGILDFYMFLGPTPEVATQQYHEVIGRPVMPPYWAMGFQLCRYGYRNTSQVQEVYEGMLNASIPYDVQYTDINYMERQLDFTIGYEFRELPQLVDRIRAGGMRYIIILDPAISGNETEPYPAFERGEEKDVFVKWPNTNDICWAKVWPDLPNITIDETLTEDEAVNASRAHVAFPDFFRNSTAEWWTREIIDFYNNYMKFDGLWIDMNEPSSFVNGTTSNVCRNDTLNFPPYFPELTKRTDGLHFRTMCMETEHILSDGSSVLHYDAHNLYGWSQAKPTYEALQKTTGKRGIVISRSTYPTGGRWAGHWLGDNYARWDNMDKSIIGMMEFSLFGISYTGADICGFFNDSEYHLCTRWTQLGAFYPFSRNHNIANTRRQDPVSWNETFVEMARDIINVRYTLLPFFYTQMHDIHANGGTVIRPLMHEFFDDRTTWDIYKQFLWGSAFMVTPALDPYVTTVNGYVPNARWFNYHDGTDIGVRGQFVDFDTPYEAINLHVRGGHILPCQEPAQNTVISRTNYMKLIVAADDDQTAQGTLFWDDGDSIDTYERDMYLLVQFNLNQTRLTSTPLKTGYINKTEIRLGYVDVWGIGRNEISQVNLVYNDRTEEAVFTQNVTQETLNINLTLNGVTLDDPIEIYWL
SIO_010081: SI
subclass of: SO_0000673
so part of: SI
location: join(9905663..9905780,9907098..9907177,9912203..9912354,9913602..9913773,9915109..9915208,9916091..9916203,9917739..9917864,9918489..9918620,9918708..9918827,9920864..9920977,9923261..9923345,9924031..9924148,9924578..9924749,9928482..9928598,9930363..9930517,9931298..9931382,9932648..9932704,9933252..9933376,9938124..9938212,9940230..9940279,9940968..9941138,9942255..9942410,9945932..9946138,9948169..9948323,9949631..9949799,9950311..9950407,9950499..9950611,9950699..9950824,9952217..9952345,9953517..9953627,9955844..9955906,9956571..9956687,9957777..9957864,9958991..9959129,9959756..9959889,9960823..9960857,9960942..9961058,9962701..9962849,9966570..9966654,9966738..9966794,9967415..9967539,9969621..9969709,9971392..9971441,9971629..9971796,9973243..9973311)
location: region:9905663-9973311:1
so has part: feature:9905663-9905780:1:exon
so has part: feature:9907098-9907177:1:exon
so has part: feature:9912203-9912354:1:exon
so has part: feature:9913602-9913773:1:exon
so has part: feature:9915109-9915208:1:exon
so has part: feature:9916091-9916203:1:exon
so has part: feature:9917739-9917864:1:exon
so has part: feature:9918489-9918620:1:exon
so has part: feature:9918708-9918827:1:exon
so has part: feature:9920864-9920977:1:exon
so has part: feature:9923261-9923345:1:exon
so has part: feature:9924031-9924148:1:exon
so has part: feature:9924578-9924749:1:exon
so has part: feature:9928482-9928598:1:exon
so has part: feature:9930363-9930517:1:exon
so has part: feature:9931298-9931382:1:exon
so has part: feature:9932648-9932704:1:exon
so has part: feature:9933252-9933376:1:exon
so has part: feature:9938124-9938212:1:exon
so has part: feature:9940230-9940279:1:exon
so has part: feature:9940968-9941138:1:exon
so has part: feature:9942255-9942410:1:exon
so has part: feature:9945932-9946138:1:exon
so has part: feature:9948169-9948323:1:exon
so has part: feature:9949631-9949799:1:exon
so has part: feature:9950311-9950407:1:exon
so has part: feature:9950499-9950611:1:exon
so has part: feature:9950699-9950824:1:exon
so has part: feature:9952217-9952345:1:exon
so has part: feature:9953517-9953627:1:exon
so has part: feature:9955844-9955906:1:exon
so has part: feature:9956571-9956687:1:exon
so has part: feature:9957777-9957864:1:exon
so has part: feature:9958991-9959129:1:exon
so has part: feature:9959756-9959889:1:exon
so has part: feature:9960823-9960857:1:exon
so has part: feature:9960942-9961058:1:exon
so has part: feature:9962701-9962849:1:exon
so has part: feature:9966570-9966654:1:exon
so has part: feature:9966738-9966794:1:exon
so has part: feature:9967415-9967539:1:exon
so has part: feature:9969621-9969709:1:exon
so has part: feature:9971392-9971441:1:exon
so has part: feature:9971629-9971796:1:exon
so has part: feature:9973243-9973311:1:exon

XP_004598407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9905663-9905780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9907098-9907177:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9912203-9912354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9913602-9913773:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9915109-9915208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9916091-9916203:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9917739-9917864:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9918489-9918620:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9918708-9918827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9920864-9920977:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9923261-9923345:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9924031-9924148:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9924578-9924749:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9928482-9928598:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9930363-9930517:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9931298-9931382:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9932648-9932704:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9933252-9933376:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9938124-9938212:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9940230-9940279:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9940968-9941138:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9942255-9942410:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9945932-9946138:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9948169-9948323:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9949631-9949799:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9950311-9950407:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:9950499-9950611:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:9950699-9950824:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:9952217-9952345:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:9953517-9953627:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:9955844-9955906:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:9956571-9956687:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:9957777-9957864:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:9958991-9959129:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:9959756-9959889:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:9960823-9960857:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:9960942-9961058:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:9962701-9962849:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:9966570-9966654:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:9966738-9966794:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:9967415-9967539:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:9969621-9969709:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:9971392-9971441:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:9971629-9971796:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:9973243-9973311:1:exon

LOC118758926
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758926
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(9926549..9926655)
location: region:9926549-9926655:-1
so has part: feature:9926549-9926655:-1:exon
subclass of: SO_0000623

118758926
type: Gene
SIO_000068: ncbigene

position:9926549:-1
position: 9926549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9926655:-1
position: 9926655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9926549-9926655:-1:exon

LOC118758926
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758926
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995875.1
SIO_010081: LOC118758926
subclass of: SO_0000673
so part of: LOC118758926
location: complement(9926549..9926655)
location: region:9926549-9926655:-1
so has part: feature:9926549-9926655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9926549-9926655:-1:exon

LOC118758978
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758978
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(10152799..10152905)
location: region:10152799-10152905:-1
so has part: feature:10152799-10152905:-1:exon
subclass of: SO_0000623

118758978
type: Gene
SIO_000068: ncbigene

position:10152799:-1
position: 10152799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10152905:-1
position: 10152905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10152799-10152905:-1:exon

LOC118758978
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758978
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995909.1
SIO_010081: LOC118758978
subclass of: SO_0000673
so part of: LOC118758978
location: complement(10152799..10152905)
location: region:10152799-10152905:-1
so has part: feature:10152799-10152905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10152799-10152905:-1:exon

LOC118758967
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758967
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 11865660..11865759
location: region:11865660-11865759:1
so has part: feature:11865660-11865759:1:exon

118758967
type: Gene
SIO_000068: ncbigene

position:11865660:1
position: 11865660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11865759:1
position: 11865759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11865660-11865759:1:exon

LOC118758967
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118758967
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118758967
subclass of: SO_0000673
so part of: LOC118758967
location: 11865660..11865759
location: region:11865660-11865759:1
so has part: feature:11865660-11865759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11865660-11865759:1:exon

LOC101520144
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101520144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(11903277..11910680)
location: region:11903277-11910680:-1
so has part: feature:11903277-11910680:-1:exon

101520144
type: Gene
SIO_000068: ncbigene

position:11903277:-1
position: 11903277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11910680:-1
position: 11910680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11903277-11910680:-1:exon

LOC101520144
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101520144
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC101520144
subclass of: SO_0000673
so part of: LOC101520144
location: complement(11903277..11904230)
location: region:11903277-11904230:-1
so has part: feature:11903277-11904230:-1:exon

position:11904230:-1
position: 11904230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11903277-11904230:-1:exon

LOC101520144
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101520144
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC101520144
subclass of: SO_0000673
so part of: LOC101520144
location: complement(11910542..11910680)
location: region:11910542-11910680:-1
so has part: feature:11910542-11910680:-1:exon

position:11910542:-1
position: 11910542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11910542-11910680:-1:exon

LOC101535155
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101535155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11931161..11987909)
location: region:11931161-11987909:-1
so has part: feature:11931161-11987909:-1:exon
subclass of: SO_0000010

101535155
type: Gene
SIO_000068: ncbigene

position:11931161:-1
position: 11931161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11987909:-1
position: 11987909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11931161-11987909:-1:exon

LOC101535155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101535155
product: vomeronasal type-2 receptor 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_036494814.1
SIO_010081: LOC101535155
subclass of: SO_0000673
so part of: LOC101535155
location: complement(join(11931161..11931214,11981628..11981855,11986953..11987802,11987853..11987909))
location: region:11931161-11987909:-1
so has part: feature:11987853-11987909:-1:exon
so has part: feature:11986953-11987802:-1:exon
so has part: feature:11981628-11981855:-1:exon
so has part: feature:11931161-11931214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11987853-11987909:-1:exon

position:11987853:-1
position: 11987853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11986953-11987802:-1:exon

position:11986953:-1
position: 11986953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11987802:-1
position: 11987802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11981628-11981855:-1:exon

position:11981628:-1
position: 11981628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11981855:-1
position: 11981855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11931161-11931214:-1:exon

position:11931214:-1
position: 11931214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101535155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101535155
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: vomeronasal type-2 receptor 1-like
translation: MENCEVSSLSNRYILELCNVGYASTSSILSDKSQFPSYVRTAPSDNFWSVAMVKLIQHFGWVWIGTIAADDDYGKYGVKVFKENMGTANLCIAFSEILPKVYSHEKMQKAIDAVRSSTAKVIVLYTSDIDLRPFVLEMVYHNITDRTWIASEAWITSAFIAKPEYFPYFGGSIGFAIPRSDIPGLKEFLYDVHPSRDPDDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKDDRLHAMSDKLCTGEEKLEELNNTYLDVSQLGITNNVRQAVYAMAYALDHLSXFIPGHYCANISDIQPWQLMFYLKTVMFTTHDGRKIEFDTNGDVVGYYDILNWQLDDNGDIAFVKVGQYVFTKSKYEFIISNNSAIFWNTESSKIGLRLYVALGLRKSEQI
SIO_010081: LOC101535155
subclass of: SO_0000673
so part of: LOC101535155
location: complement(join(11931161..11931214,11981628..11981855,11986953..11987802,11987853..11987909))
location: region:11931161-11987909:-1
so has part: feature:11987853-11987909:-1:exon
so has part: feature:11986953-11987802:-1:exon
so has part: feature:11981628-11981855:-1:exon
so has part: feature:11931161-11931214:-1:exon

XP_036350707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11987853-11987909:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11986953-11987802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11981628-11981855:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11931161-11931214:-1:exon

GYG1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: GYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12051489..12096919
location: region:12051489-12096919:1
so has part: feature:12051489-12096919:1:exon
subclass of: SO_0000010

101534911
type: Gene
SIO_000068: ncbigene

position:12051489:1
position: 12051489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12096919:1
position: 12096919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12051489-12096919:1:exon

GYG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GYG1
product: glycogenin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036494815.1
SIO_010081: GYG1
subclass of: SO_0000673
so part of: GYG1
location: join(12051489..12051519,12056884..12056970,12069654..12069673,12079399..12079427,12080470..12080644,12080896..12081058,12081994..12082120,12092739..12092958,12094752..12094802,12095086..12096919)
location: region:12051489-12096919:1
so has part: feature:12051489-12051519:1:exon
so has part: feature:12056884-12056970:1:exon
so has part: feature:12069654-12069673:1:exon
so has part: feature:12079399-12079427:1:exon
so has part: feature:12080470-12080644:1:exon
so has part: feature:12080896-12081058:1:exon
so has part: feature:12081994-12082120:1:exon
so has part: feature:12092739-12092958:1:exon
so has part: feature:12094752-12094802:1:exon
so has part: feature:12095086-12096919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12051489-12051519:1:exon

position:12051519:1
position: 12051519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12056884-12056970:1:exon

position:12056884:1
position: 12056884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12056970:1
position: 12056970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12069654-12069673:1:exon

position:12069654:1
position: 12069654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12069673:1
position: 12069673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12079399-12079427:1:exon

position:12079399:1
position: 12079399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12079427:1
position: 12079427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12080470-12080644:1:exon

position:12080470:1
position: 12080470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12080644:1
position: 12080644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12080896-12081058:1:exon

position:12080896:1
position: 12080896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12081058:1
position: 12081058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12081994-12082120:1:exon

position:12081994:1
position: 12081994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12082120:1
position: 12082120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12092739-12092958:1:exon

position:12092739:1
position: 12092739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12092958:1
position: 12092958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12094752-12094802:1:exon

position:12094752:1
position: 12094752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12094802:1
position: 12094802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12095086-12096919:1:exon

position:12095086:1
position: 12095086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GYG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycogenin-1
translation: MALVSLVAKPDQAFVTLTTNDAYAKGALVLGSSLKQHRTXRRLPVLHKPRVSEKLAKALEVVFDEVITVDILDSGDSAHLTLMKRPELGITLTKLHCWSLTQYSKCVFMDADTLVLKNIDDLFEREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLRCAAEQGSFDGGDQGLLNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFGANAKVVHFLGQTKPWNYTYDSKTKSVQSEAYDPTMAHPEFLNLWWDTFTTNVVPLLQQFGLVKDTCAYQNVLSDLVYTLAFSCGFCRKEDVSGAVSHLSLGEVPATTQPFVSSEERKERWEQGQADYMGADAFDNIKKKLDTYLQ
SIO_010081: GYG1
subclass of: SO_0000673
so part of: GYG1
location: join(12051489..12051519,12056884..12056970,12069654..12069673,12079399..12079427,12080470..12080644,12080896..12081058,12081994..12082120,12092739..12092958,12094752..12094802,12095086..12095259)
location: region:12051489-12095259:1
so has part: feature:12051489-12051519:1:exon
so has part: feature:12056884-12056970:1:exon
so has part: feature:12069654-12069673:1:exon
so has part: feature:12079399-12079427:1:exon
so has part: feature:12080470-12080644:1:exon
so has part: feature:12080896-12081058:1:exon
so has part: feature:12081994-12082120:1:exon
so has part: feature:12092739-12092958:1:exon
so has part: feature:12094752-12094802:1:exon
so has part: feature:12095086-12095259:1:exon

XP_036350708.1
type: Protein
SIO_000068: ncbiprotein

position:12095259:1
position: 12095259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12051489-12051519:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12056884-12056970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12069654-12069673:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12079399-12079427:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12080470-12080644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12080896-12081058:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12081994-12082120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12092739-12092958:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12094752-12094802:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12095086-12095259:1:exon

HLTF
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: HLTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12101381..12167726)
location: region:12101381-12167726:-1
so has part: feature:12101381-12167726:-1:exon
subclass of: SO_0000010

101534671
type: Gene
SIO_000068: ncbigene

position:12101381:-1
position: 12101381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12167726:-1
position: 12167726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12101381-12167726:-1:exon

HLTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: HLTF
product: helicase like transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930505.2
SIO_010081: HLTF
subclass of: SO_0000673
so part of: HLTF
location: complement(join(12101381..12101530,12104623..12104703,12107156..12107336,12108181..12108293,12108625..12108750,12110297..12110475,12111477..12111601,12116658..12116837,12119082..12119217,12125797..12125800,12126035..12126132,12129175..12129264,12130242..12130283,12141958..12142037,12144771..12144861,12145531..12145603,12146181..12146276,12146728..12146919,12147053..12147127,12153718..12153733,12154071..12154237,12166436..12166643,12167707..12167726))
location: region:12101381-12167726:-1
so has part: feature:12167707-12167726:-1:exon
so has part: feature:12166436-12166643:-1:exon
so has part: feature:12154071-12154237:-1:exon
so has part: feature:12153718-12153733:-1:exon
so has part: feature:12147053-12147127:-1:exon
so has part: feature:12146728-12146919:-1:exon
so has part: feature:12146181-12146276:-1:exon
so has part: feature:12145531-12145603:-1:exon
so has part: feature:12144771-12144861:-1:exon
so has part: feature:12141958-12142037:-1:exon
so has part: feature:12130242-12130283:-1:exon
so has part: feature:12129175-12129264:-1:exon
so has part: feature:12126035-12126132:-1:exon
so has part: feature:12125797-12125800:-1:exon
so has part: feature:12119082-12119217:-1:exon
so has part: feature:12116658-12116837:-1:exon
so has part: feature:12111477-12111601:-1:exon
so has part: feature:12110297-12110475:-1:exon
so has part: feature:12108625-12108750:-1:exon
so has part: feature:12108181-12108293:-1:exon
so has part: feature:12107156-12107336:-1:exon
so has part: feature:12104623-12104703:-1:exon
so has part: feature:12101381-12101530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12167707-12167726:-1:exon

position:12167707:-1
position: 12167707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12166436-12166643:-1:exon

position:12166436:-1
position: 12166436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12166643:-1
position: 12166643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12154071-12154237:-1:exon

position:12154071:-1
position: 12154071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12154237:-1
position: 12154237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12153718-12153733:-1:exon

position:12153718:-1
position: 12153718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12153733:-1
position: 12153733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12147053-12147127:-1:exon

position:12147053:-1
position: 12147053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12147127:-1
position: 12147127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12146728-12146919:-1:exon

position:12146728:-1
position: 12146728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12146919:-1
position: 12146919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12146181-12146276:-1:exon

position:12146181:-1
position: 12146181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12146276:-1
position: 12146276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12145531-12145603:-1:exon

position:12145531:-1
position: 12145531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12145603:-1
position: 12145603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12144771-12144861:-1:exon

position:12144771:-1
position: 12144771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12144861:-1
position: 12144861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12141958-12142037:-1:exon

position:12141958:-1
position: 12141958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12142037:-1
position: 12142037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12130242-12130283:-1:exon

position:12130242:-1
position: 12130242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12130283:-1
position: 12130283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:12129175-12129264:-1:exon

position:12129175:-1
position: 12129175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12129264:-1
position: 12129264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:12126035-12126132:-1:exon

position:12126035:-1
position: 12126035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12126132:-1
position: 12126132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:12125797-12125800:-1:exon

position:12125797:-1
position: 12125797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12125800:-1
position: 12125800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:12119082-12119217:-1:exon

position:12119082:-1
position: 12119082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12119217:-1
position: 12119217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:12116658-12116837:-1:exon

position:12116658:-1
position: 12116658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12116837:-1
position: 12116837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:12111477-12111601:-1:exon

position:12111477:-1
position: 12111477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12111601:-1
position: 12111601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:12110297-12110475:-1:exon

position:12110297:-1
position: 12110297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12110475:-1
position: 12110475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:12108625-12108750:-1:exon

position:12108625:-1
position: 12108625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12108750:-1
position: 12108750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:12108181-12108293:-1:exon

position:12108181:-1
position: 12108181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12108293:-1
position: 12108293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:12107156-12107336:-1:exon

position:12107156:-1
position: 12107156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12107336:-1
position: 12107336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:12104623-12104703:-1:exon

position:12104623:-1
position: 12104623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12104703:-1
position: 12104703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:12101381-12101530:-1:exon

position:12101530:-1
position: 12101530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HLTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: HLTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase-like transcription factor
translation: MSWMFKRDPVWKYLQTVQYGVHGNFARLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLFGTLRGHVVGLRYYTGVVNNNEMVALQREPNNAYDKNAIKVNNVNGNQVGYLKKDLAAALAHIMDNKLAQIEGVSGYGLKTEFDKLFEDLKEDDKTHEMEPAEAVETPLLPHQKQALAWMVSRENSKELPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGKTLTAIAVILTNFHDGKPLPVERMKKNQPKKECNSSESVKSRKNDTSKKGDELNKEACRCDEEPSISDVKKNECPTSELSGSCPKRRKISVQYIESSESEEIEINELPQKMKGKLKNTQSETKRIRAGTSKVKEDAAFACALDVSTPAPKRKMLKKGSSVVEGSKKADVEERARTTLIICPLSVLSNWINCTPIQNSLKDLWSLLSFLKLKPFVDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLTSTASPSGTSGNDTPEELRKTLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDLHGDNLLECPPEELACDTEKKSNVEWTSSSKINALMHALIDLRTKNPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKKNANEMKQAKINEIRTLIDL
SIO_010081: HLTF
subclass of: SO_0000673
so part of: HLTF
location: complement(join(12101381..12101530,12104623..12104703,12107156..12107336,12108181..12108293,12108625..12108750,12110297..12110475,12111477..12111601,12116658..12116837,12119082..12119217,12125797..12125800,12126035..12126132,12129175..12129264,12130242..12130283,12141958..12142037,12144771..12144861,12145531..12145603,12146181..12146276,12146728..12146919,12147053..12147127,12153718..12153733,12154071..12154237,12166436..12166643,12167707..12167726))
location: region:12101381-12167726:-1
so has part: feature:12167707-12167726:-1:exon
so has part: feature:12166436-12166643:-1:exon
so has part: feature:12154071-12154237:-1:exon
so has part: feature:12153718-12153733:-1:exon
so has part: feature:12147053-12147127:-1:exon
so has part: feature:12146728-12146919:-1:exon
so has part: feature:12146181-12146276:-1:exon
so has part: feature:12145531-12145603:-1:exon
so has part: feature:12144771-12144861:-1:exon
so has part: feature:12141958-12142037:-1:exon
so has part: feature:12130242-12130283:-1:exon
so has part: feature:12129175-12129264:-1:exon
so has part: feature:12126035-12126132:-1:exon
so has part: feature:12125797-12125800:-1:exon
so has part: feature:12119082-12119217:-1:exon
so has part: feature:12116658-12116837:-1:exon
so has part: feature:12111477-12111601:-1:exon
so has part: feature:12110297-12110475:-1:exon
so has part: feature:12108625-12108750:-1:exon
so has part: feature:12108181-12108293:-1:exon
so has part: feature:12107156-12107336:-1:exon
so has part: feature:12104623-12104703:-1:exon
so has part: feature:12101381-12101530:-1:exon

XP_012785959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12167707-12167726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12166436-12166643:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12154071-12154237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12153718-12153733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12147053-12147127:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12146728-12146919:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12146181-12146276:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12145531-12145603:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12144771-12144861:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12141958-12142037:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12130242-12130283:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12129175-12129264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12126035-12126132:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12125797-12125800:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12119082-12119217:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:12116658-12116837:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:12111477-12111601:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:12110297-12110475:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:12108625-12108750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:12108181-12108293:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:12107156-12107336:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:12104623-12104703:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:12101381-12101530:-1:exon

HPS3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: HPS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12179851..12215627
location: region:12179851-12215627:1
so has part: feature:12179851-12215627:1:exon
subclass of: SO_0000010

101522261
type: Gene
SIO_000068: ncbigene

position:12179851:1
position: 12179851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12215627:1
position: 12215627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12179851-12215627:1:exon

HPS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: HPS3
product: HPS3 biogenesis of lysosomal organelles complex 2 subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597703.2
SIO_010081: HPS3
subclass of: SO_0000673
so part of: HPS3
location: join(12179851..12180067,12186435..12186929,12187443..12187614,12187707..12187792,12191803..12191995,12193699..12193780,12195967..12196121,12200044..12200089,12200774..12201015,12201800..12201980,12203129..12203362,12204885..12205070,12205669..12205857,12206768..12206875,12210916..12211122,12212094..12212184,12215368..12215627)
location: region:12179851-12215627:1
so has part: feature:12179851-12180067:1:exon
so has part: feature:12186435-12186929:1:exon
so has part: feature:12187443-12187614:1:exon
so has part: feature:12187707-12187792:1:exon
so has part: feature:12191803-12191995:1:exon
so has part: feature:12193699-12193780:1:exon
so has part: feature:12195967-12196121:1:exon
so has part: feature:12200044-12200089:1:exon
so has part: feature:12200774-12201015:1:exon
so has part: feature:12201800-12201980:1:exon
so has part: feature:12203129-12203362:1:exon
so has part: feature:12204885-12205070:1:exon
so has part: feature:12205669-12205857:1:exon
so has part: feature:12206768-12206875:1:exon
so has part: feature:12210916-12211122:1:exon
so has part: feature:12212094-12212184:1:exon
so has part: feature:12215368-12215627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12179851-12180067:1:exon

position:12180067:1
position: 12180067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12186435-12186929:1:exon

position:12186435:1
position: 12186435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12186929:1
position: 12186929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12187443-12187614:1:exon

position:12187443:1
position: 12187443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12187614:1
position: 12187614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12187707-12187792:1:exon

position:12187707:1
position: 12187707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12187792:1
position: 12187792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12191803-12191995:1:exon

position:12191803:1
position: 12191803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12191995:1
position: 12191995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12193699-12193780:1:exon

position:12193699:1
position: 12193699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12193780:1
position: 12193780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12195967-12196121:1:exon

position:12195967:1
position: 12195967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12196121:1
position: 12196121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12200044-12200089:1:exon

position:12200044:1
position: 12200044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12200089:1
position: 12200089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12200774-12201015:1:exon

position:12200774:1
position: 12200774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12201015:1
position: 12201015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12201800-12201980:1:exon

position:12201800:1
position: 12201800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12201980:1
position: 12201980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12203129-12203362:1:exon

position:12203129:1
position: 12203129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12203362:1
position: 12203362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:12204885-12205070:1:exon

position:12204885:1
position: 12204885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12205070:1
position: 12205070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:12205669-12205857:1:exon

position:12205669:1
position: 12205669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12205857:1
position: 12205857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:12206768-12206875:1:exon

position:12206768:1
position: 12206768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12206875:1
position: 12206875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:12210916-12211122:1:exon

position:12210916:1
position: 12210916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12211122:1
position: 12211122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:12212094-12212184:1:exon

position:12212094:1
position: 12212094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12212184:1
position: 12212184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:12215368-12215627:1:exon

position:12215368:1
position: 12215368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HPS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: HPS3
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:12200789..12200791,aa:OTHER)
product: LOW QUALITY PROTEIN: Hermansky-Pudlak syndrome 3 protein
translation: MVQLYNLHPFGSQQVVPCKLEPERFCGGGRDALFVAAGCKVEAFAVAGQELCQPRCTFSTLGRVLRLAYSEPGDYLVTIEEKNKATFLRAYVNWRSKRTENSRVCIRMVGHHVEVPFPETLRDQMSIVEMPLSEAPLCISCCPVKGDLLVGCTNKLVLFSLKHQTINEEFSMLDFERSLIIHIDRMTPIEISFCAGYVAVMSDLEVLILKLESDPRTGERANHHVERTKIPVEQTEEGINDDTSQLEPDDFVVCQKPMELLGEKSEQSGISVTLESTGLSEEKVKYSHVQHLFYRRFAPDISLCAFSDDVKLHSLQLLPIYQTGSLTSDGKTSSQEKELLSLFCFFSLPHAGYLYMIVKSVELMSIYQYPERAQQAVLTPQFLHVITSNNLQCFTVRCSAAVAREEDPYMDTTLKACPPVSMDVCALRIQLFIGLKALCHFKNHIVLLTKADPEPIPERRESTRKFLDRRRSSICLFTPTVAGNFWDXFCESCLLLIYLLFQVDYSNTYKTVKTQSCIHLLSEAHLLVRAALMDASQLEPEEKEELLEAFKESCGHLGDCYSRLDTQHSHLALPYYKMSGLSMAEVLARVDWTGDNESQKYERGLIFFINHSLYENLDEELSEEFAAKVVKMFYVTEPKQLPHILCSPSMKNINPVTAMSYLRKMDTSGFSSVLVTLTKAAVALNMGDLDTYRNEMKSHSEMKLVCGFILEPRLLLQHRKGQGVPTEFAAHLKETQPGLLVASMLALQKNNKIGVEEADSFFKVLCGKGGDTVPQLLVDFWEAQLVACVPDVALPELLFKLTSQYIWRLSQRQPPDTTPLRTSEDLINACRHYGFIYPWVHVLVSSESLDDKNYAEDLSKLQSLICSPSFDIASVLPFLEPLSEDTVAGLSVHVLCRTRLKEHEQCIDTLLERCPEAVIPYANHELKEENRTLWWKKLLPELCQRIKYGGEKYQLHLSSLKETLSVLAVELELRDFLSVLPEDGAAAFFLPYLLYCSRKNSLT
SIO_010081: HPS3
subclass of: SO_0000673
so part of: HPS3
location: join(12179851..12180067,12186435..12186929,12187443..12187614,12187707..12187792,12191803..12191995,12193699..12193780,12195967..12196121,12200044..12200089,12200774..12201015,12201800..12201980,12203129..12203362,12204885..12205070,12205669..12205857,12206768..12206875,12210916..12211122,12212094..12212184,12215368..12215495)
location: region:12179851-12215495:1
so has part: feature:12179851-12180067:1:exon
so has part: feature:12186435-12186929:1:exon
so has part: feature:12187443-12187614:1:exon
so has part: feature:12187707-12187792:1:exon
so has part: feature:12191803-12191995:1:exon
so has part: feature:12193699-12193780:1:exon
so has part: feature:12195967-12196121:1:exon
so has part: feature:12200044-12200089:1:exon
so has part: feature:12200774-12201015:1:exon
so has part: feature:12201800-12201980:1:exon
so has part: feature:12203129-12203362:1:exon
so has part: feature:12204885-12205070:1:exon
so has part: feature:12205669-12205857:1:exon
so has part: feature:12206768-12206875:1:exon
so has part: feature:12210916-12211122:1:exon
so has part: feature:12212094-12212184:1:exon
so has part: feature:12215368-12215495:1:exon

XP_004597760.1
type: Protein
SIO_000068: ncbiprotein

position:12215495:1
position: 12215495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12179851-12180067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12186435-12186929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12187443-12187614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12187707-12187792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12191803-12191995:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12193699-12193780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12195967-12196121:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12200044-12200089:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12200774-12201015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12201800-12201980:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12203129-12203362:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12204885-12205070:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12205669-12205857:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12206768-12206875:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12210916-12211122:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:12212094-12212184:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:12215368-12215495:1:exon

LOC101534425
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101534425
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12215932..12256446)
location: region:12215932-12256446:-1
so has part: feature:12215932-12256446:-1:exon
subclass of: SO_0000010

101534425
type: Gene
SIO_000068: ncbigene

position:12215932:-1
position: 12215932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12256446:-1
position: 12256446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12215932-12256446:-1:exon

LOC101534425
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101534425
product: ceruloplasmin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930521.2
SIO_010081: LOC101534425
subclass of: SO_0000673
so part of: LOC101534425
location: complement(join(12215932..12216930,12218331..12218493,12219969..12220108,12220418..12220634,12221679..12221785,12223783..12223911,12224926..12225065,12226345..12226552,12227695..12227907,12230088..12230238,12234444..12234655,12235118..12235267,12237040..12237179,12239837..12240008,12243070..12243324,12244812..12244991,12245645..12245857,12247740..12247987,12256161..12256444))
location: region:12215932-12256444:-1
so has part: feature:12256161-12256444:-1:exon
so has part: feature:12247740-12247987:-1:exon
so has part: feature:12245645-12245857:-1:exon
so has part: feature:12244812-12244991:-1:exon
so has part: feature:12243070-12243324:-1:exon
so has part: feature:12239837-12240008:-1:exon
so has part: feature:12237040-12237179:-1:exon
so has part: feature:12235118-12235267:-1:exon
so has part: feature:12234444-12234655:-1:exon
so has part: feature:12230088-12230238:-1:exon
so has part: feature:12227695-12227907:-1:exon
so has part: feature:12226345-12226552:-1:exon
so has part: feature:12224926-12225065:-1:exon
so has part: feature:12223783-12223911:-1:exon
so has part: feature:12221679-12221785:-1:exon
so has part: feature:12220418-12220634:-1:exon
so has part: feature:12219969-12220108:-1:exon
so has part: feature:12218331-12218493:-1:exon
so has part: feature:12215932-12216930:-1:exon

position:12256444:-1
position: 12256444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12256161-12256444:-1:exon

position:12256161:-1
position: 12256161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12247740-12247987:-1:exon

position:12247740:-1
position: 12247740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12247987:-1
position: 12247987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12245645-12245857:-1:exon

position:12245645:-1
position: 12245645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12245857:-1
position: 12245857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12244812-12244991:-1:exon

position:12244812:-1
position: 12244812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12244991:-1
position: 12244991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12243070-12243324:-1:exon

position:12243070:-1
position: 12243070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12243324:-1
position: 12243324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12239837-12240008:-1:exon

position:12239837:-1
position: 12239837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12240008:-1
position: 12240008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12237040-12237179:-1:exon

position:12237040:-1
position: 12237040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12237179:-1
position: 12237179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12235118-12235267:-1:exon

position:12235118:-1
position: 12235118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12235267:-1
position: 12235267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12234444-12234655:-1:exon

position:12234444:-1
position: 12234444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12234655:-1
position: 12234655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12230088-12230238:-1:exon

position:12230088:-1
position: 12230088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12230238:-1
position: 12230238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12227695-12227907:-1:exon

position:12227695:-1
position: 12227695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12227907:-1
position: 12227907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:12226345-12226552:-1:exon

position:12226345:-1
position: 12226345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12226552:-1
position: 12226552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:12224926-12225065:-1:exon

position:12224926:-1
position: 12224926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12225065:-1
position: 12225065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:12223783-12223911:-1:exon

position:12223783:-1
position: 12223783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12223911:-1
position: 12223911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:12221679-12221785:-1:exon

position:12221679:-1
position: 12221679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12221785:-1
position: 12221785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:12220418-12220634:-1:exon

position:12220418:-1
position: 12220418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12220634:-1
position: 12220634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:12219969-12220108:-1:exon

position:12219969:-1
position: 12219969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12220108:-1
position: 12220108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:12218331-12218493:-1:exon

position:12218331:-1
position: 12218331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12218493:-1
position: 12218493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:12215932-12216930:-1:exon

position:12216930:-1
position: 12216930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101534425
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101534425
product: ceruloplasmin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597751.3
SIO_010081: LOC101534425
subclass of: SO_0000673
so part of: LOC101534425
location: complement(join(12216893..12216930,12218331..12218493,12219969..12220108,12220418..12220634,12221679..12221785,12223783..12223911,12224926..12225065,12226345..12226552,12227695..12227907,12230088..12230238,12234444..12234655,12235124..12235267,12237040..12237179,12239837..12240008,12243070..12243324,12244812..12244991,12245645..12245857,12247740..12247987,12256161..12256446))
location: region:12216893-12256446:-1
so has part: feature:12256161-12256446:-1:exon
so has part: feature:12247740-12247987:-1:exon
so has part: feature:12245645-12245857:-1:exon
so has part: feature:12244812-12244991:-1:exon
so has part: feature:12243070-12243324:-1:exon
so has part: feature:12239837-12240008:-1:exon
so has part: feature:12237040-12237179:-1:exon
so has part: feature:12235124-12235267:-1:exon
so has part: feature:12234444-12234655:-1:exon
so has part: feature:12230088-12230238:-1:exon
so has part: feature:12227695-12227907:-1:exon
so has part: feature:12226345-12226552:-1:exon
so has part: feature:12224926-12225065:-1:exon
so has part: feature:12223783-12223911:-1:exon
so has part: feature:12221679-12221785:-1:exon
so has part: feature:12220418-12220634:-1:exon
so has part: feature:12219969-12220108:-1:exon
so has part: feature:12218331-12218493:-1:exon
so has part: feature:12216893-12216930:-1:exon

position:12216893:-1
position: 12216893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12256161-12256446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12247740-12247987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12245645-12245857:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12244812-12244991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12243070-12243324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12239837-12240008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12237040-12237179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12235124-12235267:-1:exon

position:12235124:-1
position: 12235124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12234444-12234655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12230088-12230238:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12227695-12227907:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12226345-12226552:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12224926-12225065:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12223783-12223911:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12221679-12221785:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:12220418-12220634:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:12219969-12220108:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:12218331-12218493:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:12216893-12216930:-1:exon

LOC101534425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101534425
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceruloplasmin isoform X2
translation: MKLLMFGIFLFLCNTRARAEEKHYYIGIIETTWSYATDIGDKKLISVDTEHFNKYLQNGPTRIGRIYKKALYLQYTDENFTTVVEKPAWLGLLGPIIKAEIGDKVFVHLKNFASRPYTFHSHGMTYYKDHEGAIYPDNTTDFQKADDKVLPGQQYTYILSASEEQRPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLILCKKDSLDKEKEKERNIDQEFVVMFSVVDENLSWYLEDNIKAYCSEPEKVDRDDEEFQESNRMYSVNGHSFGSLPGLSMCAEDRVKWYLFGMGNEIDVHAAFFHGQTLTSKNYHIDTINLFPATLFDALMVAQSPGEWMLTCQNLNHLQAGLQAFFQVQDCKKPPAEDDILEKQVRHYYIAAEEIIWNYAPSGVDMFTNESLTAPGSASEVFFEQGPARIGGSYKKLVYREYTDASFTNRKERGPEEEHLGLLGPVIWAEVGDVIKVTFKNKGPFPLSIQPTGLRFSKDNEGTYYASHSNPSGPPSASHVAPTQSFTYEWRVPKEVGPTHADPVCLSKMYYSATHPTKDIFTGLIGPMKICKKGSLHENGKQKDVDKEFYLFPTVFDENESLLLDDNIRMFASAPDQVEKDDPDFQESNKMHSMNGFMYGNQPGLSMCQGDSVLWYLFSAGNEADVHGIYFSGNTYVSGGERRDTANLFPQTSLRLFMRPDSEGTFDVECLTTDHYTGGMKQKYTVDQCRRLSEGPAIYREERTYYIAAVEVEWDYSPSRKWEKELHHLQEQNVSNVFLDKEEFYIGSKYRKAVYREYTDSTFAVPVARKAEEEHLGVLGPQLHADVGDEVKIIFKNMATRPYSIHAHGVKTQSPTVTPTLPGETRTYIWQIPDRSGAGNEDLACIPWAYYSTVDQVKDLYSGLIGPLIVCRKHYLKVFNPIKKVEFSLLFLVFDENESWYLDDNIKRYSEHPDKVDKDDEDFIESNKMHAINGRMFGNLHGLTMHTGDEVNWYLMGMGNEIDLHTVHFHGHSFRYKHRGMYSSDVFDIFPGTYQTVEMFPETPGIWLLHCHVTDHIHAGMETTYTVLPNTETKSG
SIO_010081: LOC101534425
subclass of: SO_0000673
so part of: LOC101534425
location: complement(join(12216914..12216930,12218331..12218493,12219969..12220108,12220418..12220634,12221679..12221785,12223783..12223911,12224926..12225065,12226345..12226552,12227695..12227907,12230088..12230238,12234444..12234655,12235124..12235267,12237040..12237179,12239837..12240008,12243070..12243324,12244812..12244991,12245645..12245857,12247740..12247987,12256161..12256306))
location: region:12216914-12256306:-1
so has part: feature:12256161-12256306:-1:exon
so has part: feature:12247740-12247987:-1:exon
so has part: feature:12245645-12245857:-1:exon
so has part: feature:12244812-12244991:-1:exon
so has part: feature:12243070-12243324:-1:exon
so has part: feature:12239837-12240008:-1:exon
so has part: feature:12237040-12237179:-1:exon
so has part: feature:12235124-12235267:-1:exon
so has part: feature:12234444-12234655:-1:exon
so has part: feature:12230088-12230238:-1:exon
so has part: feature:12227695-12227907:-1:exon
so has part: feature:12226345-12226552:-1:exon
so has part: feature:12224926-12225065:-1:exon
so has part: feature:12223783-12223911:-1:exon
so has part: feature:12221679-12221785:-1:exon
so has part: feature:12220418-12220634:-1:exon
so has part: feature:12219969-12220108:-1:exon
so has part: feature:12218331-12218493:-1:exon
so has part: feature:12216914-12216930:-1:exon

XP_004597808.2
type: Protein
SIO_000068: ncbiprotein

position:12216914:-1
position: 12216914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12256306:-1
position: 12256306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12256161-12256306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12247740-12247987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12245645-12245857:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12244812-12244991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12243070-12243324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12239837-12240008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12237040-12237179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12235124-12235267:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12234444-12234655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12230088-12230238:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12227695-12227907:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12226345-12226552:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12224926-12225065:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12223783-12223911:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12221679-12221785:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:12220418-12220634:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:12219969-12220108:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:12218331-12218493:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:12216914-12216930:-1:exon

LOC101534425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101534425
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceruloplasmin isoform X1
translation: MKLLMFGIFLFLCNTRARAEEKHYYIGIIETTWSYATDIGDKKLISVDTEHFNKYLQNGPTRIGRIYKKALYLQYTDENFTTVVEKPAWLGLLGPIIKAEIGDKVFVHLKNFASRPYTFHSHGMTYYKDHEGAIYPDNTTDFQKADDKVLPGQQYTYILSASEEQRPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLILCKKDSLDKEKEKERNIDQEFVVMFSVVDENLSWYLEDNIKAYCSEPEKVDRDDEEFQESNRMYSVNGHSFGSLPGLSMCAEDRVKWYLFGMGNEIDVHAAFFHGQTLTSKNYHIDTINLFPATLFDALMVAQSPGEWMLTCQNLNHLQAGLQAFFQVQDCKKPPAEDDILEKQVRHYYIAAEEIIWNYAPSGVDMFTNESLTAPGSASEVFFEQGPARIGGSYKKLVYREYTDASFTNRKERGPEEEHLGLLGPVIWAEVGDVIKVTFKNKGPFPLSIQPTGLRFSKDNEGTYYASHSNPSGGGPPSASHVAPTQSFTYEWRVPKEVGPTHADPVCLSKMYYSATHPTKDIFTGLIGPMKICKKGSLHENGKQKDVDKEFYLFPTVFDENESLLLDDNIRMFASAPDQVEKDDPDFQESNKMHSMNGFMYGNQPGLSMCQGDSVLWYLFSAGNEADVHGIYFSGNTYVSGGERRDTANLFPQTSLRLFMRPDSEGTFDVECLTTDHYTGGMKQKYTVDQCRRLSEGPAIYREERTYYIAAVEVEWDYSPSRKWEKELHHLQEQNVSNVFLDKEEFYIGSKYRKAVYREYTDSTFAVPVARKAEEEHLGVLGPQLHADVGDEVKIIFKNMATRPYSIHAHGVKTQSPTVTPTLPGETRTYIWQIPDRSGAGNEDLACIPWAYYSTVDQVKDLYSGLIGPLIVCRKHYLKVFNPIKKVEFSLLFLVFDENESWYLDDNIKRYSEHPDKVDKDDEDFIESNKMHAINGRMFGNLHGLTMHTGDEVNWYLMGMGNEIDLHTVHFHGHSFRYKHRGMYSSDVFDIFPGTYQTVEMFPETPGIWLLHCHVTDHIHAGMETTYTVLPNTETKSG
SIO_010081: LOC101534425
subclass of: SO_0000673
so part of: LOC101534425
location: complement(join(12216914..12216930,12218331..12218493,12219969..12220108,12220418..12220634,12221679..12221785,12223783..12223911,12224926..12225065,12226345..12226552,12227695..12227907,12230088..12230238,12234444..12234655,12235118..12235267,12237040..12237179,12239837..12240008,12243070..12243324,12244812..12244991,12245645..12245857,12247740..12247987,12256161..12256306))
location: region:12216914-12256306:-1
so has part: feature:12256161-12256306:-1:exon
so has part: feature:12247740-12247987:-1:exon
so has part: feature:12245645-12245857:-1:exon
so has part: feature:12244812-12244991:-1:exon
so has part: feature:12243070-12243324:-1:exon
so has part: feature:12239837-12240008:-1:exon
so has part: feature:12237040-12237179:-1:exon
so has part: feature:12235118-12235267:-1:exon
so has part: feature:12234444-12234655:-1:exon
so has part: feature:12230088-12230238:-1:exon
so has part: feature:12227695-12227907:-1:exon
so has part: feature:12226345-12226552:-1:exon
so has part: feature:12224926-12225065:-1:exon
so has part: feature:12223783-12223911:-1:exon
so has part: feature:12221679-12221785:-1:exon
so has part: feature:12220418-12220634:-1:exon
so has part: feature:12219969-12220108:-1:exon
so has part: feature:12218331-12218493:-1:exon
so has part: feature:12216914-12216930:-1:exon

XP_012785975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12256161-12256306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12247740-12247987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12245645-12245857:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12244812-12244991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12243070-12243324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12239837-12240008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12237040-12237179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12235118-12235267:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12234444-12234655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12230088-12230238:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12227695-12227907:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12226345-12226552:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12224926-12225065:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12223783-12223911:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12221679-12221785:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:12220418-12220634:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:12219969-12220108:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:12218331-12218493:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:12216914-12216930:-1:exon

TM4SF18
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TM4SF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12288223..12298966)
location: region:12288223-12298966:-1
so has part: feature:12288223-12298966:-1:exon
subclass of: SO_0000010

101534176
type: Gene
SIO_000068: ncbigene

position:12288223:-1
position: 12288223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12298966:-1
position: 12298966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12288223-12298966:-1:exon

TM4SF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TM4SF18
product: transmembrane 4 L six family member 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012930520.1
SIO_010081: TM4SF18
subclass of: SO_0000673
so part of: TM4SF18
location: complement(join(12288223..12288523,12289401..12289581,12292263..12292405,12296232..12296321,12298520..12298713,12298803..12298966))
location: region:12288223-12298966:-1
so has part: feature:12298803-12298966:-1:exon
so has part: feature:12298520-12298713:-1:exon
so has part: feature:12296232-12296321:-1:exon
so has part: feature:12292263-12292405:-1:exon
so has part: feature:12289401-12289581:-1:exon
so has part: feature:12288223-12288523:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12298803-12298966:-1:exon

position:12298803:-1
position: 12298803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12298520-12298713:-1:exon

position:12298520:-1
position: 12298520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12298713:-1
position: 12298713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12296232-12296321:-1:exon

position:12296232:-1
position: 12296232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12296321:-1
position: 12296321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12292263-12292405:-1:exon

position:12292263:-1
position: 12292263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12292405:-1
position: 12292405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12289401-12289581:-1:exon

position:12289401:-1
position: 12289401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12289581:-1
position: 12289581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12288223-12288523:-1:exon

position:12288523:-1
position: 12288523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TM4SF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TM4SF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 4 L6 family member 18
translation: MGSRQCGGCLSCLLIPLALWSIIVNVLLYFPNGQTSYASSNKLASYVWYFEGICFSGVMMLIVAAILLVLENKNSCKCCQSENCSKKYMALLSIIFSALGIASSGYCLVISALGLVQGPYCRTIDGWEYAFESTRGRFLIDPSIWSQCLEPIHVVEWNIILFSILIALSGLQVVICFIRVVMQLFKMLCSTYSVIIQPRII
SIO_010081: TM4SF18
subclass of: SO_0000673
so part of: TM4SF18
location: complement(join(12288509..12288523,12289401..12289581,12292263..12292405,12296232..12296321,12298520..12298696))
location: region:12288509-12298696:-1
so has part: feature:12298520-12298696:-1:exon
so has part: feature:12296232-12296321:-1:exon
so has part: feature:12292263-12292405:-1:exon
so has part: feature:12289401-12289581:-1:exon
so has part: feature:12288509-12288523:-1:exon

XP_012785974.1
type: Protein
SIO_000068: ncbiprotein

position:12288509:-1
position: 12288509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12298696:-1
position: 12298696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12298520-12298696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12296232-12296321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12292263-12292405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12289401-12289581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12288509-12288523:-1:exon

LOC118758892
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758892
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 12300889..12300977
location: region:12300889-12300977:1
so has part: feature:12300889-12300977:1:exon

118758892
type: Gene
SIO_000068: ncbigene

position:12300889:1
position: 12300889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12300977:1
position: 12300977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12300889-12300977:1:exon

LOC118758892
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118758892
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118758892
subclass of: SO_0000673
so part of: LOC118758892
location: 12300889..12300977
location: region:12300889-12300977:1
so has part: feature:12300889-12300977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12300889-12300977:1:exon

TM4SF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TM4SF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12328120..12336427)
location: region:12328120-12336427:-1
so has part: feature:12328120-12336427:-1:exon
subclass of: SO_0000010

101533933
type: Gene
SIO_000068: ncbigene

position:12328120:-1
position: 12328120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12336427:-1
position: 12336427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12328120-12336427:-1:exon

TM4SF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TM4SF1
product: transmembrane 4 L six family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_012930514.1
SIO_010081: TM4SF1
subclass of: SO_0000673
so part of: TM4SF1
location: complement(join(12328120..12328895,12330573..12330753,12334449..12334594,12334681..12334770,12336151..12336427))
location: region:12328120-12336427:-1
so has part: feature:12336151-12336427:-1:exon
so has part: feature:12334681-12334770:-1:exon
so has part: feature:12334449-12334594:-1:exon
so has part: feature:12330573-12330753:-1:exon
so has part: feature:12328120-12328895:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12336151-12336427:-1:exon

position:12336151:-1
position: 12336151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12334681-12334770:-1:exon

position:12334681:-1
position: 12334681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12334770:-1
position: 12334770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12334449-12334594:-1:exon

position:12334449:-1
position: 12334449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12334594:-1
position: 12334594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12330573-12330753:-1:exon

position:12330573:-1
position: 12330573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12330753:-1
position: 12330753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12328120-12328895:-1:exon

position:12328895:-1
position: 12328895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TM4SF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TM4SF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 4 L6 family member 1
translation: MCYGRCARSIGHCLIWLAVLSIVANILLYFPNGETKYATENLLSRFVWFFAGILGGGLLILLPAFVFIGLEEDDCCGCCGHENCGKRCSMLSSGLMATIGILGSGYCIIVAALGLAEGPRCLNSLGQWNYTFASTEGQYLLDTSTWSQCVEPKHIVEWNVTLFSILLALGGIEFILCLVQVINGVLGGICGYCCSRQQRYDC
SIO_010081: TM4SF1
subclass of: SO_0000673
so part of: TM4SF1
location: complement(join(12328881..12328895,12330573..12330753,12334449..12334594,12334681..12334770,12336151..12336327))
location: region:12328881-12336327:-1
so has part: feature:12336151-12336327:-1:exon
so has part: feature:12334681-12334770:-1:exon
so has part: feature:12334449-12334594:-1:exon
so has part: feature:12330573-12330753:-1:exon
so has part: feature:12328881-12328895:-1:exon

XP_012785968.1
type: Protein
SIO_000068: ncbiprotein

position:12328881:-1
position: 12328881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12336327:-1
position: 12336327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12336151-12336327:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12334681-12334770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12334449-12334594:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12330573-12330753:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12328881-12328895:-1:exon

TM4SF4
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TM4SF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12432520..12450639
location: region:12432520-12450639:1
so has part: feature:12432520-12450639:1:exon
subclass of: SO_0000010

101533684
type: Gene
SIO_000068: ncbigene

position:12432520:1
position: 12432520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12450639:1
position: 12450639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12432520-12450639:1:exon

TM4SF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TM4SF4
product: transmembrane 4 L six family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004597748.3
SIO_010081: TM4SF4
subclass of: SO_0000673
so part of: TM4SF4
location: join(12432520..12432866,12433551..12433640,12443833..12443981,12450351..12450639)
location: region:12432520-12450639:1
so has part: feature:12432520-12432866:1:exon
so has part: feature:12433551-12433640:1:exon
so has part: feature:12443833-12443981:1:exon
so has part: feature:12450351-12450639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12432520-12432866:1:exon

position:12432866:1
position: 12432866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12433551-12433640:1:exon

position:12433551:1
position: 12433551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12433640:1
position: 12433640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12443833-12443981:1:exon

position:12443833:1
position: 12443833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12443981:1
position: 12443981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12450351-12450639:1:exon

position:12450351:1
position: 12450351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TM4SF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TM4SF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 4 L6 family member 4
translation: MCTGSCAKCLGGTLIPLAVIGLLANILLFFPGGKVSDSNDHITDEVWYFGGIAGSGVLMIFPALVFLGLKNNDCCGCCGNQGCGKRFAMFTSTIFAAIGFVGAGYSFIISAVAINKGPKCLFAGDASSGTWGYPFENGDYLGNHSIWSLCREPRDIVPWNLTLFSILLVVGIVQMCLCAIQVVNGLLGTLCGDCRCCCGVSEGPTGRRLIGRRVASADACRTAGLTAGRLVNP
SIO_010081: TM4SF4
subclass of: SO_0000673
so part of: TM4SF4
location: join(12432693..12432866,12433551..12433640,12443833..12443981,12450351..12450639)
location: region:12432693-12450639:1
so has part: feature:12432693-12432866:1:exon
so has part: feature:12433551-12433640:1:exon
so has part: feature:12443833-12443981:1:exon
so has part: feature:12450351-12450639:1:exon

XP_004597805.1
type: Protein
SIO_000068: ncbiprotein

position:12432693:1
position: 12432693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12432693-12432866:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12433551-12433640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12443833-12443981:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12450351-12450639:1:exon

WWTR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: WWTR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12476722..12607178)
location: region:12476722-12607178:-1
so has part: feature:12476722-12607178:-1:exon
subclass of: SO_0000010

101522007
type: Gene
SIO_000068: ncbigene

position:12476722:-1
position: 12476722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12607178:-1
position: 12607178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12476722-12607178:-1:exon

WWTR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: WWTR1
product: WW domain containing transcription regulator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597702.3
SIO_010081: WWTR1
subclass of: SO_0000673
so part of: WWTR1
location: complement(join(12476722..12477634,12480146..12480258,12481942..12482075,12495832..12496037,12524127..12524266,12606093..12606525,12606985..12607178))
location: region:12476722-12607178:-1
so has part: feature:12606985-12607178:-1:exon
so has part: feature:12606093-12606525:-1:exon
so has part: feature:12524127-12524266:-1:exon
so has part: feature:12495832-12496037:-1:exon
so has part: feature:12481942-12482075:-1:exon
so has part: feature:12480146-12480258:-1:exon
so has part: feature:12476722-12477634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12606985-12607178:-1:exon

position:12606985:-1
position: 12606985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12606093-12606525:-1:exon

position:12606093:-1
position: 12606093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12606525:-1
position: 12606525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12524127-12524266:-1:exon

position:12524127:-1
position: 12524127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12524266:-1
position: 12524266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12495832-12496037:-1:exon

position:12495832:-1
position: 12495832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12496037:-1
position: 12496037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12481942-12482075:-1:exon

position:12481942:-1
position: 12481942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12482075:-1
position: 12482075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12480146-12480258:-1:exon

position:12480146:-1
position: 12480146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12480258:-1
position: 12480258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12476722-12477634:-1:exon

position:12477634:-1
position: 12477634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WWTR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: WWTR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WW domain-containing transcription regulator protein 1
translation: MNPASAPPPLPPPGQQVIHVTQDLDTDLKALFNSVMNPKPSSWRKKILPESFFKEPDSGSHPRQSSTDSSAGHPGPRLPGGAQHVRSHSSPASLQLGTGAGAAASPAPQHVHYCQRSYDLTEEPPLPPGWEMAFTATGQRYFLNHIEKITTWQDPRKAMNQPLNPMNVHAAVSSNPVPPQRSLAVAQPNLVMNHQPQQSMTPSTLSQQSHPAQNPPAAGLMSMPSALTTQQQQQQKLQLQRIQMERERIRMRQEELMRQEAALCRQLPMEADTLATVQAAVNPPAMTPDMRSITNNSSDPFLNGGPYHSREQSTDSGLGLGCYSVPTTPEDFLSNVEEMDTGENAGQTPMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPLFNDVESALNKSEPFLTWL
SIO_010081: WWTR1
subclass of: SO_0000673
so part of: WWTR1
location: complement(join(12477450..12477634,12480146..12480258,12481942..12482075,12495832..12496037,12524127..12524266,12606093..12606523))
location: region:12477450-12606523:-1
so has part: feature:12606093-12606523:-1:exon
so has part: feature:12524127-12524266:-1:exon
so has part: feature:12495832-12496037:-1:exon
so has part: feature:12481942-12482075:-1:exon
so has part: feature:12480146-12480258:-1:exon
so has part: feature:12477450-12477634:-1:exon

XP_004597759.1
type: Protein
SIO_000068: ncbiprotein

position:12477450:-1
position: 12477450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12606523:-1
position: 12606523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12606093-12606523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12524127-12524266:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12495832-12496037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12481942-12482075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12480146-12480258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12477450-12477634:-1:exon

LOC101533454
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101533454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(12644116..12646353)
location: region:12644116-12646353:-1
so has part: feature:12644116-12646353:-1:exon

101533454
type: Gene
SIO_000068: ncbigene

position:12644116:-1
position: 12644116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12646353:-1
position: 12646353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12644116-12646353:-1:exon

LOC101533454
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101533454
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC101533454
subclass of: SO_0000673
so part of: LOC101533454
location: complement(12644116..12644126)
location: region:12644116-12644126:-1
so has part: feature:12644116-12644126:-1:exon

position:12644126:-1
position: 12644126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12644116-12644126:-1:exon

LOC101533454
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101533454
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC101533454
subclass of: SO_0000673
so part of: LOC101533454
location: complement(12644558..12644856)
location: region:12644558-12644856:-1
so has part: feature:12644558-12644856:-1:exon

position:12644558:-1
position: 12644558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12644856:-1
position: 12644856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12644558-12644856:-1:exon

LOC101533454
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101533454
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC101533454
subclass of: SO_0000673
so part of: LOC101533454
location: complement(12645194..12645306)
location: region:12645194-12645306:-1
so has part: feature:12645194-12645306:-1:exon

position:12645194:-1
position: 12645194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12645306:-1
position: 12645306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12645194-12645306:-1:exon

LOC101533454
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101533454
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC101533454
subclass of: SO_0000673
so part of: LOC101533454
location: complement(12645885..12645983)
location: region:12645885-12645983:-1
so has part: feature:12645885-12645983:-1:exon

position:12645885:-1
position: 12645885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12645983:-1
position: 12645983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12645885-12645983:-1:exon

LOC101533454
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101533454
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC101533454
subclass of: SO_0000673
so part of: LOC101533454
location: complement(12646312..12646353)
location: region:12646312-12646353:-1
so has part: feature:12646312-12646353:-1:exon

position:12646312:-1
position: 12646312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12646312-12646353:-1:exon

COMMD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: COMMD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12674863..12705247)
location: region:12674863-12705247:-1
so has part: feature:12674863-12705247:-1:exon
subclass of: SO_0000010

101521760
type: Gene
SIO_000068: ncbigene

position:12674863:-1
position: 12674863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12705247:-1
position: 12705247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12674863-12705247:-1:exon

COMMD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: COMMD2
product: COMM domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597701.2
SIO_010081: COMMD2
subclass of: SO_0000673
so part of: COMMD2
location: complement(join(12674863..12675127,12686333..12686506,12687041..12687123,12704977..12705054,12705141..12705247))
location: region:12674863-12705247:-1
so has part: feature:12705141-12705247:-1:exon
so has part: feature:12704977-12705054:-1:exon
so has part: feature:12687041-12687123:-1:exon
so has part: feature:12686333-12686506:-1:exon
so has part: feature:12674863-12675127:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12705141-12705247:-1:exon

position:12705141:-1
position: 12705141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12704977-12705054:-1:exon

position:12704977:-1
position: 12704977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12705054:-1
position: 12705054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12687041-12687123:-1:exon

position:12687041:-1
position: 12687041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12687123:-1
position: 12687123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12686333-12686506:-1:exon

position:12686333:-1
position: 12686333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12686506:-1
position: 12686506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12674863-12675127:-1:exon

position:12675127:-1
position: 12675127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COMMD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: COMMD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COMM domain-containing protein 2
translation: MLLDLSEEHREHLAFLPRVDSAVVAEFGRIAVEFLRRGSNPKVYEGAARKLNVSSDTVQHGVEGLIYLLTESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTILSELAPDLPTYHSLEWRLDVQLASRSLRQQIKPAVTMKLHLNQNGERATEVLQTDPATLLHLVQQLEQALEEMKTNHCRRVVRNIK
SIO_010081: COMMD2
subclass of: SO_0000673
so part of: COMMD2
location: complement(join(12674930..12675127,12686333..12686506,12687041..12687123,12704977..12705054,12705141..12705207))
location: region:12674930-12705207:-1
so has part: feature:12705141-12705207:-1:exon
so has part: feature:12704977-12705054:-1:exon
so has part: feature:12687041-12687123:-1:exon
so has part: feature:12686333-12686506:-1:exon
so has part: feature:12674930-12675127:-1:exon

XP_004597758.1
type: Protein
SIO_000068: ncbiprotein

position:12674930:-1
position: 12674930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12705207:-1
position: 12705207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12705141-12705207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12704977-12705054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12687041-12687123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12686333-12686506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12674930-12675127:-1:exon

ANKUB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ANKUB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12697182..12739723)
location: region:12697182-12739723:-1
so has part: feature:12697182-12739723:-1:exon
subclass of: SO_0000010

101533213
type: Gene
SIO_000068: ncbigene

position:12697182:-1
position: 12697182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12739723:-1
position: 12739723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12697182-12739723:-1:exon

ANKUB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ANKUB1
product: ankyrin repeat and ubiquitin domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_036494852.1
SIO_010081: ANKUB1
subclass of: SO_0000673
so part of: ANKUB1
location: complement(join(12697182..12697311,12712227..12713159,12716682..12716796,12728837..12729053,12737477..12737620,12739634..12739723))
location: region:12697182-12739723:-1
so has part: feature:12739634-12739723:-1:exon
so has part: feature:12737477-12737620:-1:exon
so has part: feature:12728837-12729053:-1:exon
so has part: feature:12716682-12716796:-1:exon
so has part: feature:12712227-12713159:-1:exon
so has part: feature:12697182-12697311:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12739634-12739723:-1:exon

position:12739634:-1
position: 12739634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12737477-12737620:-1:exon

position:12737477:-1
position: 12737477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12737620:-1
position: 12737620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12728837-12729053:-1:exon

position:12728837:-1
position: 12728837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12729053:-1
position: 12729053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12716682-12716796:-1:exon

position:12716682:-1
position: 12716682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12716796:-1
position: 12716796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12712227-12713159:-1:exon

position:12712227:-1
position: 12712227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12713159:-1
position: 12713159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12697182-12697311:-1:exon

position:12697311:-1
position: 12697311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKUB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ANKUB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ANKUB1
translation: MRIFIAFEGSFEPFDVSAEATVGTVKLMIKDHFHIPVSEDKQGVRYLELMYAGAALKDSWSLADIGVSFCSTLKCSVKEEDKPALYVFNAVTQETMAIIESTSLFGKKVCDLRTLVTLRCGFPVSVYCLRTPEGVELYDCNCLGDYGIDLGTTLRLDVWDGWKEFLMGCLLGQKMKVERYLSKEGPVLKYQRRVVLYIAALHGYMELTEWALKQGARPHEAVGVHPYRAWCQEALHADVSKCPIHAAAEAGQLLILKAFVNCSVLCLECANAAGHTPLTIAFKHRHKDCVLYLLSKMRSTVSFPKISVPMKIYIKIKQWVLRAQSRSLPRSQLCGTRLLGAKVGDTVMVDGFTEPKMTSRSWHQAESKDSRSTLHKLPPLRERAQSRKPVRSWASSQLDTKGQPLQFPPLMNANLSSVLQHSQQQNQKKATARKKEKLIKNAYLPQVPLPAVSRAGYSHPSFYYATPSADFLLRNCFAPFAQHSGRTPRENAIYCLAMASAFKEKRWLQQLGIARVLARKSISNLTPQGGLTARENPAATLL
SIO_010081: ANKUB1
subclass of: SO_0000673
so part of: ANKUB1
location: complement(join(12697182..12697311,12712227..12713159,12716682..12716796,12728837..12729053,12737477..12737620,12739634..12739723))
location: region:12697182-12739723:-1
so has part: feature:12739634-12739723:-1:exon
so has part: feature:12737477-12737620:-1:exon
so has part: feature:12728837-12729053:-1:exon
so has part: feature:12716682-12716796:-1:exon
so has part: feature:12712227-12713159:-1:exon
so has part: feature:12697182-12697311:-1:exon

XP_036350745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12739634-12739723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12737477-12737620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12728837-12729053:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12716682-12716796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12712227-12713159:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12697182-12697311:-1:exon

LOC118758916
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758916
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 12722773..12722856
location: region:12722773-12722856:1
so has part: feature:12722773-12722856:1:exon

118758916
type: Gene
SIO_000068: ncbigene

position:12722773:1
position: 12722773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12722856:1
position: 12722856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12722773-12722856:1:exon

LOC118758916
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118758916
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118758916
subclass of: SO_0000673
so part of: LOC118758916
location: 12722773..12722856
location: region:12722773-12722856:1
so has part: feature:12722773-12722856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12722773-12722856:1:exon

LOC101521520
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101521520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(12746257..12746684)
location: region:12746257-12746684:-1
so has part: feature:12746257-12746684:-1:exon

101521520
type: Gene
SIO_000068: ncbigene

position:12746257:-1
position: 12746257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12746684:-1
position: 12746684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12746257-12746684:-1:exon

LOC101521520
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101521520
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
pseudo: true
SIO_010081: LOC101521520
subclass of: SO_0000673
so part of: LOC101521520
location: complement(12746257..12746684)
location: region:12746257-12746684:-1
so has part: feature:12746257-12746684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12746257-12746684:-1:exon

RNF13
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RNF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12754120..12850458
location: region:12754120-12850458:1
so has part: feature:12754120-12850458:1:exon
subclass of: SO_0000010

101521275
type: Gene
SIO_000068: ncbigene

position:12754120:1
position: 12754120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12850458:1
position: 12850458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12754120-12850458:1:exon

RNF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RNF13
product: ring finger protein 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 18 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597700.1
SIO_010081: RNF13
subclass of: SO_0000673
so part of: RNF13
location: join(12754120..12754264,12785048..12785174,12793760..12793840,12810961..12811086,12833250..12833337,12838136..12838226,12842939..12843044,12846095..12846188,12849529..12849609,12849849..12850458)
location: region:12754120-12850458:1
so has part: feature:12754120-12754264:1:exon
so has part: feature:12785048-12785174:1:exon
so has part: feature:12793760-12793840:1:exon
so has part: feature:12810961-12811086:1:exon
so has part: feature:12833250-12833337:1:exon
so has part: feature:12838136-12838226:1:exon
so has part: feature:12842939-12843044:1:exon
so has part: feature:12846095-12846188:1:exon
so has part: feature:12849529-12849609:1:exon
so has part: feature:12849849-12850458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12754120-12754264:1:exon

position:12754264:1
position: 12754264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12785048-12785174:1:exon

position:12785048:1
position: 12785048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12785174:1
position: 12785174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12793760-12793840:1:exon

position:12793760:1
position: 12793760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12793840:1
position: 12793840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12810961-12811086:1:exon

position:12810961:1
position: 12810961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12811086:1
position: 12811086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12833250-12833337:1:exon

position:12833250:1
position: 12833250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12833337:1
position: 12833337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12838136-12838226:1:exon

position:12838136:1
position: 12838136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12838226:1
position: 12838226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12842939-12843044:1:exon

position:12842939:1
position: 12842939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12843044:1
position: 12843044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12846095-12846188:1:exon

position:12846095:1
position: 12846095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12846188:1
position: 12846188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12849529-12849609:1:exon

position:12849529:1
position: 12849529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12849609:1
position: 12849609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12849849-12850458:1:exon

position:12849849:1
position: 12849849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RNF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF13
translation: MLLSIGMLMLSATQVYTILTVQLFAFLNLLPVEADILAYDFENASQTFDDLPARFGYRLPTEGLKGFLINSKPENACEPIVPPPLKDNSSSAFIVLIRRFDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIDVLKKIDIPSVFIGESSANSLKDEFTYEKGGHIVLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVSEHTPLLRPLASGSAQSFGALSESRSHQNGTESSDYEEEDNEGSDSSDAENEVNEHSVVVQLQPNEWDYNIANTV
SIO_010081: RNF13
subclass of: SO_0000673
so part of: RNF13
location: join(12785061..12785174,12793760..12793840,12810961..12811086,12833250..12833337,12838136..12838226,12842939..12843044,12846095..12846188,12849529..12849609,12849849..12850210)
location: region:12785061-12850210:1
so has part: feature:12785061-12785174:1:exon
so has part: feature:12793760-12793840:1:exon
so has part: feature:12810961-12811086:1:exon
so has part: feature:12833250-12833337:1:exon
so has part: feature:12838136-12838226:1:exon
so has part: feature:12842939-12843044:1:exon
so has part: feature:12846095-12846188:1:exon
so has part: feature:12849529-12849609:1:exon
so has part: feature:12849849-12850210:1:exon

XP_004597757.1
type: Protein
SIO_000068: ncbiprotein

position:12785061:1
position: 12785061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12850210:1
position: 12850210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12785061-12785174:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12793760-12793840:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12810961-12811086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12833250-12833337:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12838136-12838226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12842939-12843044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12846095-12846188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12849529-12849609:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12849849-12850210:1:exon

LOC118758858
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12850594..12858275
location: region:12850594-12858275:1
so has part: feature:12850594-12858275:1:exon
subclass of: SO_0000010

118758858
type: Gene
SIO_000068: ncbigene

position:12850594:1
position: 12850594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12858275:1
position: 12858275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12850594-12858275:1:exon

LOC118758858
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC118758858
product: E3 ubiquitin-protein ligase RNF13-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036494817.1
SIO_010081: LOC118758858
subclass of: SO_0000673
so part of: LOC118758858
location: join(12850594..12850611,12852783..12852876,12856217..12856297,12856537..12858275)
location: region:12850594-12858275:1
so has part: feature:12850594-12850611:1:exon
so has part: feature:12852783-12852876:1:exon
so has part: feature:12856217-12856297:1:exon
so has part: feature:12856537-12858275:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12850594-12850611:1:exon

position:12850611:1
position: 12850611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12852783-12852876:1:exon

position:12852783:1
position: 12852783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12852876:1
position: 12852876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12856217-12856297:1:exon

position:12856217:1
position: 12856217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12856297:1
position: 12856297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12856537-12858275:1:exon

position:12856537:1
position: 12856537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118758858
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC118758858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF13-like
translation: MAELENITKFVQDRHRARRNRLRKDQLKKLPIHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVSEHTPLLRPLASGSAQSFGALSESRSHQNGTESSDYEEEDNEGSDSSDAENEVNEHSVVVQLQPNEWDYNIANTV
SIO_010081: LOC118758858
subclass of: SO_0000673
so part of: LOC118758858
location: join(12850594..12850611,12852783..12852876,12856217..12856297,12856537..12856898)
location: region:12850594-12856898:1
so has part: feature:12850594-12850611:1:exon
so has part: feature:12852783-12852876:1:exon
so has part: feature:12856217-12856297:1:exon
so has part: feature:12856537-12856898:1:exon

XP_036350710.1
type: Protein
SIO_000068: ncbiprotein

position:12856898:1
position: 12856898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12850594-12850611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12852783-12852876:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12856217-12856297:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12856537-12856898:1:exon

TSC22D2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TSC22D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13324348..13389917
location: region:13324348-13389917:1
so has part: feature:13324348-13389917:1:exon
subclass of: SO_0000010

101532978
type: Gene
SIO_000068: ncbigene

position:13324348:1
position: 13324348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13389917:1
position: 13389917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13324348-13389917:1:exon

TSC22D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TSC22D2
product: TSC22 domain family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597746.2
SIO_010081: TSC22D2
subclass of: SO_0000673
so part of: TSC22D2
location: join(13324348..13325075,13325597..13326154,13338351..13338422,13387414..13387465,13388206..13389917)
location: region:13324348-13389917:1
so has part: feature:13324348-13325075:1:exon
so has part: feature:13325597-13326154:1:exon
so has part: feature:13338351-13338422:1:exon
so has part: feature:13387414-13387465:1:exon
so has part: feature:13388206-13389917:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13324348-13325075:1:exon

position:13325075:1
position: 13325075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13325597-13326154:1:exon

position:13325597:1
position: 13325597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13326154:1
position: 13326154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13338351-13338422:1:exon

position:13338351:1
position: 13338351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13338422:1
position: 13338422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13387414-13387465:1:exon

position:13387414:1
position: 13387414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13387465:1
position: 13387465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13388206-13389917:1:exon

position:13388206:1
position: 13388206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSC22D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TSC22D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TSC22 domain family protein 2
translation: MSKMPAKKKSCFQITSVTTAQVASSITEDTESLDDPDESRTEDVSSEIFDVSRTTDYGPEEACERSSSEETLNNVGEAETPGAVSPNLLLDGQLAAAAAAAAPANGGGTVPARTVAGALASSLVTAAAPVSGTPAASGAPPPPPATCSSSRFRVIKLDQGSGEPYRRGRWTCMEYYERDADGSVLSRSGDCIRHNSPAEPAAERDSGLGATGGSVLVLVASVQGAHGPDSGPDSSLAAVSQLLDAMVLGPGPQAALGGVGPPQSVVVPAPPVGGTGQLAALPGGPHALVPGVANVPAAVPAPSVPSVATTSVTMPNVPAPLVPAQQLGSLAHAGLPLAPGTHSAPTSLPQSDLSQFQTPAQPLAGPADDTRRKSEPLPQAPLSLTAENKPVVKPPAADALANPLQLTPMNSLATSVFGIAIPVDGDEDRNPSTAFYQAFHLNTFQESKSLWDSASGGGVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELVERNCLLERENALLKSLSNNDQLSQLPAPPANPGSTSQQQAATAQPPQQPPQQPNVSSA
SIO_010081: TSC22D2
subclass of: SO_0000673
so part of: TSC22D2
location: join(13324348..13325075,13325597..13326154,13338351..13338422,13387414..13387465,13388206..13388460)
location: region:13324348-13388460:1
so has part: feature:13324348-13325075:1:exon
so has part: feature:13325597-13326154:1:exon
so has part: feature:13338351-13338422:1:exon
so has part: feature:13387414-13387465:1:exon
so has part: feature:13388206-13388460:1:exon

XP_004597803.1
type: Protein
SIO_000068: ncbiprotein

position:13388460:1
position: 13388460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13324348-13325075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13325597-13326154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13338351-13338422:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13387414-13387465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13388206-13388460:1:exon

SERP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SERP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13453455..13455383)
location: region:13453455-13455383:-1
so has part: feature:13453455-13455383:-1:exon
subclass of: SO_0000010

101520465
type: Gene
SIO_000068: ncbigene

position:13453455:-1
position: 13453455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13455383:-1
position: 13455383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13453455-13455383:-1:exon

SERP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SERP1
product: stress associated endoplasmic reticulum protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004597696.2
SIO_010081: SERP1
subclass of: SO_0000673
so part of: SERP1
location: complement(join(13453455..13453736,13454887..13454962,13455249..13455383))
location: region:13453455-13455383:-1
so has part: feature:13455249-13455383:-1:exon
so has part: feature:13454887-13454962:-1:exon
so has part: feature:13453455-13453736:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13455249-13455383:-1:exon

position:13455249:-1
position: 13455249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13454887-13454962:-1:exon

position:13454887:-1
position: 13454887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13454962:-1
position: 13454962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13453455-13453736:-1:exon

position:13453736:-1
position: 13453736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SERP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stress-associated endoplasmic reticulum protein 1
translation: MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMGM
SIO_010081: SERP1
subclass of: SO_0000673
so part of: SERP1
location: complement(join(13453696..13453736,13454887..13454962,13455249..13455332))
location: region:13453696-13455332:-1
so has part: feature:13455249-13455332:-1:exon
so has part: feature:13454887-13454962:-1:exon
so has part: feature:13453696-13453736:-1:exon

XP_004597753.1
type: Protein
SIO_000068: ncbiprotein

position:13453696:-1
position: 13453696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13455332:-1
position: 13455332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13455249-13455332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13454887-13454962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13453696-13453736:-1:exon

EIF2A
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: EIF2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13464400..13519731
location: region:13464400-13519731:1
so has part: feature:13464400-13519731:1:exon
subclass of: SO_0000010

101520217
type: Gene
SIO_000068: ncbigene

position:13464400:1
position: 13464400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13519731:1
position: 13519731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13464400-13519731:1:exon

EIF2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: EIF2A
product: eukaryotic translation initiation factor 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597695.2
SIO_010081: EIF2A
subclass of: SO_0000673
so part of: EIF2A
location: join(13464400..13464503,13472606..13472675,13481524..13481598,13484570..13484688,13492616..13492689,13492828..13492972,13493123..13493239,13495935..13496506,13500440..13500550,13517519..13517647,13518555..13518620,13519333..13519731)
location: region:13464400-13519731:1
so has part: feature:13464400-13464503:1:exon
so has part: feature:13472606-13472675:1:exon
so has part: feature:13481524-13481598:1:exon
so has part: feature:13484570-13484688:1:exon
so has part: feature:13492616-13492689:1:exon
so has part: feature:13492828-13492972:1:exon
so has part: feature:13493123-13493239:1:exon
so has part: feature:13495935-13496506:1:exon
so has part: feature:13500440-13500550:1:exon
so has part: feature:13517519-13517647:1:exon
so has part: feature:13518555-13518620:1:exon
so has part: feature:13519333-13519731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13464400-13464503:1:exon

position:13464503:1
position: 13464503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13472606-13472675:1:exon

position:13472606:1
position: 13472606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13472675:1
position: 13472675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13481524-13481598:1:exon

position:13481524:1
position: 13481524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13481598:1
position: 13481598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13484570-13484688:1:exon

position:13484570:1
position: 13484570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13484688:1
position: 13484688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13492616-13492689:1:exon

position:13492616:1
position: 13492616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13492689:1
position: 13492689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13492828-13492972:1:exon

position:13492828:1
position: 13492828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13492972:1
position: 13492972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13493123-13493239:1:exon

position:13493123:1
position: 13493123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13493239:1
position: 13493239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13495935-13496506:1:exon

position:13495935:1
position: 13495935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13496506:1
position: 13496506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13500440-13500550:1:exon

position:13500440:1
position: 13500440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13500550:1
position: 13500550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13517519-13517647:1:exon

position:13517519:1
position: 13517519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13517647:1
position: 13517647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13518555-13518620:1:exon

position:13518555:1
position: 13518555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13518620:1
position: 13518620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13519333-13519731:1:exon

position:13519333:1
position: 13519333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EIF2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: EIF2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 2A
translation: MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVYAFSKDGTLFTWCNGEKVNTINVTNKEPLHSFELPKTVCLEFSPKNTVLATWQPYTNTIANKLHLQKINDFVLSPGPQPYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIASTDVDKTGASYYGEQTLHYIATNGESAVVQLPKGGPIYDVVWNSSSTEFCAVYGFMPAKATIFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDAKNYKLISKPVASDSTYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPANGELWQVSWQPFLDGVFPAKAITYQAVPSEVPSEEPKVTTAYRPPALRNKPVTHSKLHEEEPPQNMKPQGNDKPISKTALKNQRKHEAKKAAKQEARSDKSPDLTSIPAPQSTPRNITSQSTSGDPEVDKKIKNLKKKLKAIEQLKEQAAGGKQLEKNQLEKIQKEKALLQELEDLELGI
SIO_010081: EIF2A
subclass of: SO_0000673
so part of: EIF2A
location: join(13464476..13464503,13472606..13472675,13481524..13481598,13484570..13484688,13492616..13492689,13492828..13492972,13493123..13493239,13495935..13496506,13500440..13500550,13517519..13517647,13518555..13518620,13519333..13519398)
location: region:13464476-13519398:1
so has part: feature:13464476-13464503:1:exon
so has part: feature:13472606-13472675:1:exon
so has part: feature:13481524-13481598:1:exon
so has part: feature:13484570-13484688:1:exon
so has part: feature:13492616-13492689:1:exon
so has part: feature:13492828-13492972:1:exon
so has part: feature:13493123-13493239:1:exon
so has part: feature:13495935-13496506:1:exon
so has part: feature:13500440-13500550:1:exon
so has part: feature:13517519-13517647:1:exon
so has part: feature:13518555-13518620:1:exon
so has part: feature:13519333-13519398:1:exon

XP_004597752.1
type: Protein
SIO_000068: ncbiprotein

position:13464476:1
position: 13464476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13519398:1
position: 13519398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13464476-13464503:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13472606-13472675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13481524-13481598:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13484570-13484688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13492616-13492689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13492828-13492972:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13493123-13493239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13495935-13496506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13500440-13500550:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13517519-13517647:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13518555-13518620:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13519333-13519398:1:exon

SELENOT
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SELENOT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13544535..13586250
location: region:13544535-13586250:1
so has part: feature:13544535-13586250:1:exon
subclass of: SO_0000010

101519965
type: Gene
SIO_000068: ncbigene

position:13544535:1
position: 13544535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13586250:1
position: 13586250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13544535-13586250:1:exon

SELENOT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SELENOT
product: selenoprotein T
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012930518.1
SIO_010081: SELENOT
subclass of: SO_0000673
so part of: SELENOT
location: join(13544535..13544707,13575953..13576063,13577135..13577261,13579077..13579164,13585420..13585572,13586069..13586250)
location: region:13544535-13586250:1
so has part: feature:13544535-13544707:1:exon
so has part: feature:13575953-13576063:1:exon
so has part: feature:13577135-13577261:1:exon
so has part: feature:13579077-13579164:1:exon
so has part: feature:13585420-13585572:1:exon
so has part: feature:13586069-13586250:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13544535-13544707:1:exon

position:13544707:1
position: 13544707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13575953-13576063:1:exon

position:13575953:1
position: 13575953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13576063:1
position: 13576063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13577135-13577261:1:exon

position:13577135:1
position: 13577135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13577261:1
position: 13577261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13579077-13579164:1:exon

position:13579077:1
position: 13579077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13579164:1
position: 13579164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13585420-13585572:1:exon

position:13585420:1
position: 13585420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13585572:1
position: 13585572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13586069-13586250:1:exon

position:13586069:1
position: 13586069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SELENOT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SELENOT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:13575960..13575962,aa:Sec)
product: thioredoxin reductase-like selenoprotein T
translation: MRLVLLFLVAASAVARSEASANLGGVPSKRLKMQYATGPLLKFQICVSUGYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFLGMQAPSIWQWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNGVPVWSKLESGHLPSMQQLVQILDNEMKLNVHMDSIPHHRS
SIO_010081: SELENOT
subclass of: SO_0000673
so part of: SELENOT
location: join(13544571..13544707,13575953..13576063,13577135..13577261,13579077..13579164,13585420..13585544)
location: region:13544571-13585544:1
so has part: feature:13544571-13544707:1:exon
so has part: feature:13575953-13576063:1:exon
so has part: feature:13577135-13577261:1:exon
so has part: feature:13579077-13579164:1:exon
so has part: feature:13585420-13585544:1:exon

XP_012785972.1
type: Protein
SIO_000068: ncbiprotein

position:13544571:1
position: 13544571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13585544:1
position: 13585544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13544571-13544707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13575953-13576063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13577135-13577261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13579077-13579164:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13585420-13585544:1:exon

ERICH6
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ERICH6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13610826..13662257)
location: region:13610826-13662257:-1
so has part: feature:13610826-13662257:-1:exon
subclass of: SO_0000010

101532732
type: Gene
SIO_000068: ncbigene

position:13610826:-1
position: 13610826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13662257:-1
position: 13662257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13610826-13662257:-1:exon

ERICH6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ERICH6
product: glutamate rich 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004597745.2
SIO_010081: ERICH6
subclass of: SO_0000673
so part of: ERICH6
location: complement(join(13610826..13611096,13613802..13614030,13616002..13616157,13619148..13619233,13623410..13623552,13636955..13637103,13637482..13637639,13637743..13637750,13647330..13647420,13650364..13650480,13650574..13650629,13650882..13650944,13652527..13652618,13661131..13661188,13661876..13662257))
location: region:13610826-13662257:-1
so has part: feature:13661876-13662257:-1:exon
so has part: feature:13661131-13661188:-1:exon
so has part: feature:13652527-13652618:-1:exon
so has part: feature:13650882-13650944:-1:exon
so has part: feature:13650574-13650629:-1:exon
so has part: feature:13650364-13650480:-1:exon
so has part: feature:13647330-13647420:-1:exon
so has part: feature:13637743-13637750:-1:exon
so has part: feature:13637482-13637639:-1:exon
so has part: feature:13636955-13637103:-1:exon
so has part: feature:13623410-13623552:-1:exon
so has part: feature:13619148-13619233:-1:exon
so has part: feature:13616002-13616157:-1:exon
so has part: feature:13613802-13614030:-1:exon
so has part: feature:13610826-13611096:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13661876-13662257:-1:exon

position:13661876:-1
position: 13661876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13661131-13661188:-1:exon

position:13661131:-1
position: 13661131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13661188:-1
position: 13661188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13652527-13652618:-1:exon

position:13652527:-1
position: 13652527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13652618:-1
position: 13652618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13650882-13650944:-1:exon