Ochotona princeps isolate UAM:Mamm:113957 chromosome 8, OchPri4.0, whole genome shotgun sequence.
type: Entry
definition: Ochotona princeps isolate UAM:Mamm:113957 chromosome 8, OchPri4.0, whole genome shotgun sequence.
sequence version: NC_050543.1
sequence date: 2020-10-09
sequence: sequence
division: CON
label: NC_050543.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA666703
dblink: SAMN15664588
keyword: WGS
keyword: RefSeq
source: Ochotona princeps (American pika)
organism: Ochotona princeps
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM025728.1.\nAssembly name: OchPri4.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of British\nColumbia Okanagan on 2020/09/21. The original whole-genome shotgun\nproject has the accession JACJUE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of British Columbia\n Okanagan\nAssembly Method :: Dovetail HiRise v. 2017\nAssembly Name :: OchPri4.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: GCA_000292845.1\nGenome Coverage :: 23.68x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Ochotona princeps Annotation Release\n 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 74871712
topology: linear
so has quality: SO_0000987
location: 1..74871712
location: region:1-74871712:1
RO_0002162: 9978

NC_050543
type: RefSeq
SIO_000068: refseq

PRJNA666703
type: BioProject
SIO_000068: bioproject

SAMN15664588
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74871712:1
position: 74871712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-74871712:1:source
so part of: sequence
organism: Ochotona princeps
mol type: genomic DNA
isolate: UAM:Mamm:113957
chromosome: 8
sex: male
tissue type: liver
dev stage: adult
country: USA: Beaverhead-Deerlodge National Forest, Montana
lat lon: 45.34309 N 113.67609 W
collection date: 2010-06-19

9978
type: Taxonomy
SIO_000068: taxonomy

LOC101517536
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101517536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 150230..1115068
location: region:150230-1115068:1
so has part: feature:150230-1115068:1:exon
subclass of: SO_0000010

101517536
type: Gene
SIO_000068: ncbigene

position:150230:1
position: 150230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115068:1
position: 1115068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150230-1115068:1:exon

LOC101517536
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101517536
product: zinc finger protein 585A-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 Proteins
transcript id: XM_036493490.1
SIO_010081: LOC101517536
subclass of: SO_0000673
so part of: LOC101517536
location: join(150230..151803,151853..151968,667955..668738,1114053..1115068)
location: region:150230-1115068:1
so has part: feature:150230-151803:1:exon
so has part: feature:151853-151968:1:exon
so has part: feature:667955-668738:1:exon
so has part: feature:1114053-1115068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150230-151803:1:exon

position:151803:1
position: 151803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:151853-151968:1:exon

position:151853:1
position: 151853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151968:1
position: 151968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:667955-668738:1:exon

position:667955:1
position: 667955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668738:1
position: 668738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1114053-1115068:1:exon

position:1114053:1
position: 1114053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101517536
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101517536
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 585A-like
translation: MNITQQSFEHNGKEKTFSAKNFLMCDEVYTKDPHNKRPVNVGKTIQVEKKMFHNNLYFGKHQQTQPGEILHNHFNSEKSLLNKTDVKVNQISQRAKSHYICVCCTKSFSCASFLTTKQRTDTRENSYVCNECKEHMYQKSELTRGHILHTREKSYECNKLGKAFDKQLSLIRDQKIYTEQKTYKCRDCGKAFTNQSHFIRHQRIHTGGKPYQCSECGKAFSQKSSLIMHQRIHTGERPHECTECGKAFIKHSVLIRHQRSHTGEKPYECSQCGKAFSQKSNLVFHRRIHTGEKPYECTECGKAFIKHSGLIRHQRIHTGEKPYECRQCGKAFSQKSNQIIHQRIHTGEKPYECIQCGKAFSHKSHMIIHQRLHSRRIPYECSECGRAFSNHSSLITHVRIHTGEKPHECSQCGKAFSQKSQVIIHQRIHTGEKPHECSQCGKAFSQKSSLIIHQRIHTGEKPYQCAECGKAFSQKSSLIMHQRIHTGEKPYECAECGKAFTSSSNLFRHKRIHTGEKPYEYSDCGECQKAYYRKSHIMRHQRIQAGKETYRCSECGKCYCRQSNLTVHQRTHTGEKPYECNECSKTFCQKSNLSHQRTHTGEKLYERNKCSKSFYQKSHLIVHHRTHTGEKPYNCSKYMKSFSLKSDLTIHQRTHTGEKPYECNGCGKSFNQKSNLIRHQRTHTGEKPYECNKCEKSFYPKSNLILHQKTHTGEKPYECKECRKSFYQKSDLTIHQRIHTGEKPYECNECSKTFCRKSDLSSHMRIHTGEKPHECKECRKSFSRKSDLTVHQRTHTREKPYECNEYRKTFCQKSHLSMHQRTHTRFHTVEKPYECSQCGKAFSYKSHLIRHQRFHTGEKPYECNQCGKAFSCKSHLIRHXRIHTGEKLYECIQCGKAFSQKAQLIRHQRIHTGGNIYECNECGKAFTSHSNLMRHERIHTGEKPYECSECGKAYTRHSYLIAHQSIHTGEKPYECSDCGKAFSSHSYLIAHQSIHTGVKAYECSECGKAFTNHSHLIRHQKIHTREKPYECSQCGKAFTQHSSLIIHQKIHTGEKPYECSQCGKAFRDNSTFIRHQRIHTGEKPXKKAYCAKSYLIIHQKIHTGGKAYECSLCGKSFAHQACLITHQRIHTGEKLDKCSCFGNFFTYHSGLIAHHRIHMEEML
SIO_010081: LOC101517536
subclass of: SO_0000673
so part of: LOC101517536
location: join(150230..151803,151853..151968,667955..668738,1114053..1115068)
location: region:150230-1115068:1
so has part: feature:150230-151803:1:exon
so has part: feature:151853-151968:1:exon
so has part: feature:667955-668738:1:exon
so has part: feature:1114053-1115068:1:exon

XP_036349383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150230-151803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151853-151968:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667955-668738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1114053-1115068:1:exon

LOC101517625
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101517625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(164726..601836)
location: region:164726-601836:-1
so has part: feature:164726-601836:-1:exon
subclass of: SO_0000010

101517625
type: Gene
SIO_000068: ncbigene

position:164726:-1
position: 164726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601836:-1
position: 601836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164726-601836:-1:exon

LOC101517625
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101517625
product: zinc finger protein 585A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493486.1
SIO_010081: LOC101517625
subclass of: SO_0000673
so part of: LOC101517625
location: complement(join(164726..165176,191571..191731,191868..192457,254555..254620,254783..255300,440885..440889,453393..453408,591305..592218,592282..592946,601378..601467,601698..601836))
location: region:164726-601836:-1
so has part: feature:601698-601836:-1:exon
so has part: feature:601378-601467:-1:exon
so has part: feature:592282-592946:-1:exon
so has part: feature:591305-592218:-1:exon
so has part: feature:453393-453408:-1:exon
so has part: feature:440885-440889:-1:exon
so has part: feature:254783-255300:-1:exon
so has part: feature:254555-254620:-1:exon
so has part: feature:191868-192457:-1:exon
so has part: feature:191571-191731:-1:exon
so has part: feature:164726-165176:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:601698-601836:-1:exon

position:601698:-1
position: 601698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:601378-601467:-1:exon

position:601378:-1
position: 601378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601467:-1
position: 601467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:592282-592946:-1:exon

position:592282:-1
position: 592282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592946:-1
position: 592946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:591305-592218:-1:exon

position:591305:-1
position: 591305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592218:-1
position: 592218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:453393-453408:-1:exon

position:453393:-1
position: 453393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453408:-1
position: 453408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:440885-440889:-1:exon

position:440885:-1
position: 440885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440889:-1
position: 440889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:254783-255300:-1:exon

position:254783:-1
position: 254783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255300:-1
position: 255300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:254555-254620:-1:exon

position:254555:-1
position: 254555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254620:-1
position: 254620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:191868-192457:-1:exon

position:191868:-1
position: 191868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192457:-1
position: 192457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:191571-191731:-1:exon

position:191571:-1
position: 191571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191731:-1
position: 191731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:164726-165176:-1:exon

position:165176:-1
position: 165176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101517625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101517625
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 4 bases at 4 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(join(192456..192457, 254555)),aa:OTHER)
transl except: (pos:complement(191687..191689),aa:OTHER)
transl except: (pos:complement(191672..191674),aa:OTHER)
transl except: (pos:complement(191648..191650),aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger protein 585A-like
translation: MPLQGLVSFEDVAVDFTWEEWQDLDDTQKTLYRDVMLETYNCLASLGHCIPKPEMILKLEQGEEPWVVETLNQRHPDAQNVDHVIETIQENQDRHLWMVIISNSKSTTKQRLELGKPFNFNSNRISELIINNGNYLDNETKELIMCQNMNISSDAGTINAQEKSDNHDRTEIFFRRPDYIGKHQNKQCECEFRGQVRTFSTEAMFFIPRRLHREETSYKGKKYGKPSGKSAFIIQERTQVEGKAFDYGMYEKTFIKPKLTDLQKIHIGEKSSKCTEEPFILKAPIISHQGTHTPQKPYKCSDCNKYMKYFFQISDLILQPRIREKPHKCSDCRKSFCRKSDLIVHQRTHTGEKPYECNECSKTFCQKSNLSSHQRTHTGEKPYECNECSKSFYQKSDLIVHHRTHTGEKPYNCSKCMKSFSRKSDLTVHQRTHTGEKPYECNGCGKSFNQKSNLIRHQRTHTGEKPYECNKCEKSFYQKSNLILHQKTHTGEKPYECKECRKSFYQKSDLNIHQRIHTGEKPYECNECSKTFCRKSYLSSHMRIHTGEKPHECKECRKSFSRKSDLTVHQRTHTGEKPYECNECRKTFCQKSHLSVHQRTHTREKPHPCHECKENMYQKSELNRDQILQSAENPYECNEHGKTFHQQLSLIRHRSIDTRKKSYECSECGKAVFCKSHLIRHQRIHTGEKPYECSECGKAFSQKPHLIAHQRIHTGEKPYECSECGKCFRYRRHLFKHQRIHTGEKLHECSECGKAFSNKSSIRSHQRIHTGEKPHECRECGKSFSQKSHLIIHQRIHTGQKPYEXNPYECTECGKAFHRKLSLTRHRRIHTRKKSYECSECGKGFTRNSSLIIHQKIHTGEKPYECSDCGKAFSQKSYLTIHQRVHTGAKPYECSECGKAFSHKSNIRAHQKIHKGEKAYECSDCEKAFPRKLHLIAHQRIHSGEKPYECSECGKAFTQKSTLMRHQRVHTGEKPYECSVCSKAFIQQSGFIQHQRIHTGQKLYKCSLCEKVFTYXSGFIXHQRIHRAXEPYECNECGQSCCKQSSFIKHQNSHGPPKAKCWLPGHYPGAEDNGSCGYLPDPGMLEECHRKCKELFSIQMEGVKLTVNKGLSNHFRVNHTVALRTIGESNYHFGVTYMGTKQLSPKEAFPVLVEDMHNSGNLNTQVIHQLCLRLRSKLAIQTQQSKLVNWQLDGEYRGSDSITV
SIO_010081: LOC101517625
subclass of: SO_0000673
so part of: LOC101517625
location: complement(join(164726..165176,191571..191731,191868..192457,254555..254620,254783..255300,440885..440889,453393..453408,591305..592218,592282..592946,601378..601467,601698..601836))
location: region:164726-601836:-1
so has part: feature:601698-601836:-1:exon
so has part: feature:601378-601467:-1:exon
so has part: feature:592282-592946:-1:exon
so has part: feature:591305-592218:-1:exon
so has part: feature:453393-453408:-1:exon
so has part: feature:440885-440889:-1:exon
so has part: feature:254783-255300:-1:exon
so has part: feature:254555-254620:-1:exon
so has part: feature:191868-192457:-1:exon
so has part: feature:191571-191731:-1:exon
so has part: feature:164726-165176:-1:exon

XP_036349379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:601698-601836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:601378-601467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:592282-592946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591305-592218:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453393-453408:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440885-440889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:254783-255300:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254555-254620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191868-192457:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:191571-191731:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:164726-165176:-1:exon

LOC101517878
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101517878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(237676..250837)
location: region:237676-250837:-1
so has part: feature:237676-250837:-1:exon

101517878
type: Gene
SIO_000068: ncbigene

position:237676:-1
position: 237676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250837:-1
position: 250837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237676-250837:-1:exon

LOC101517878
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101517878
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC101517878
subclass of: SO_0000673
so part of: LOC101517878
location: complement(237676..238662)
location: region:237676-238662:-1
so has part: feature:237676-238662:-1:exon

position:238662:-1
position: 238662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237676-238662:-1:exon

LOC101517878
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101517878
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC101517878
subclass of: SO_0000673
so part of: LOC101517878
location: complement(239939..239971)
location: region:239939-239971:-1
so has part: feature:239939-239971:-1:exon

position:239939:-1
position: 239939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239971:-1
position: 239971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239939-239971:-1:exon

LOC101517878
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101517878
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC101517878
subclass of: SO_0000673
so part of: LOC101517878
location: complement(250813..250837)
location: region:250813-250837:-1
so has part: feature:250813-250837:-1:exon

position:250813:-1
position: 250813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250813-250837:-1:exon

LOC101527533
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101527533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 337635..345437
location: region:337635-345437:1
so has part: feature:337635-345437:1:exon
subclass of: SO_0000010

101527533
type: Gene
SIO_000068: ncbigene

position:337635:1
position: 337635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345437:1
position: 345437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337635-345437:1:exon

LOC101527533
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101527533
product: E3 ubiquitin-protein ligase Midline-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_036493487.1
SIO_010081: LOC101527533
subclass of: SO_0000673
so part of: LOC101527533
location: join(337635..338321,339256..339351,339442..339549,340304..340452,340580..340707,343359..343496,343874..344029,344456..344648,345020..345155,345243..345437)
location: region:337635-345437:1
so has part: feature:337635-338321:1:exon
so has part: feature:339256-339351:1:exon
so has part: feature:339442-339549:1:exon
so has part: feature:340304-340452:1:exon
so has part: feature:340580-340707:1:exon
so has part: feature:343359-343496:1:exon
so has part: feature:343874-344029:1:exon
so has part: feature:344456-344648:1:exon
so has part: feature:345020-345155:1:exon
so has part: feature:345243-345437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337635-338321:1:exon

position:338321:1
position: 338321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:339256-339351:1:exon

position:339256:1
position: 339256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339351:1
position: 339351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:339442-339549:1:exon

position:339442:1
position: 339442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339549:1
position: 339549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:340304-340452:1:exon

position:340304:1
position: 340304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340452:1
position: 340452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:340580-340707:1:exon

position:340580:1
position: 340580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340707:1
position: 340707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:343359-343496:1:exon

position:343359:1
position: 343359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343496:1
position: 343496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:343874-344029:1:exon

position:343874:1
position: 343874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344029:1
position: 344029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:344456-344648:1:exon

position:344456:1
position: 344456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344648:1
position: 344648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:345020-345155:1:exon

position:345020:1
position: 345020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345155:1
position: 345155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:345243-345437:1:exon

position:345243:1
position: 345243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101527533
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101527533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Midline-1-like
translation: MRACGGGRQTMAAAVGDPDAAFAEAPEAGGEDTAEEEEEEDDPDGDPGGDPDGDPAVPCQRGLGAQRSTCAAGPAPGQSTPPTTAGPSPHLITPPITAGHAPRLLNPPSTAGHAPRLLSPPTGFSGPICRLLCPPTKAGHAHEHLRDHAHRLLSLQQASGHAPRLLAPPTTTNHAPRLLVPPPSARHASSGPERPPSGADHAPSSPDHAHVNFPLVCVASITECAQAGRLELENSLGQLGRRRAELEAQLAKLTQTSHDVEESASRQEAKLVEECELLVRVIQQRRQAISTKIQEGKALRLSRLAQLVSQLKQSLERSASLAAQAELALRETDPARFLQTARELAERVSMATASSPVLLPAGPTPDAFDSLAFDFSREKELLAALDVLTVPSPPRLRPELCTASHDTVTLHWACDDAARVVSYELRYGLTDAGAGGPAPDAWLLVPDVRQTSFTVHGLQAGSRYAFRVRALNPAGGRDGETARLRTHSQPFKLDPETAHRKLRVSRDQLTVEPVSSSWRGHAPQWAAPGVAGNVVLDSGRHYWEVLLSAGAWYAVGLAYTSAPPQEWAGLGAASWALLRRAGAWVARHAGREWAPEAGLRRLGVLLDFEAGSLAFFDGSARLHVFRVTAFVQPVRPTFALDARPLSVRTGLPVPEHADHTP
SIO_010081: LOC101527533
subclass of: SO_0000673
so part of: LOC101527533
location: join(337635..338321,339256..339351,339442..339549,340304..340452,340580..340707,343359..343496,343874..344029,344456..344648,345020..345155,345243..345437)
location: region:337635-345437:1
so has part: feature:337635-338321:1:exon
so has part: feature:339256-339351:1:exon
so has part: feature:339442-339549:1:exon
so has part: feature:340304-340452:1:exon
so has part: feature:340580-340707:1:exon
so has part: feature:343359-343496:1:exon
so has part: feature:343874-344029:1:exon
so has part: feature:344456-344648:1:exon
so has part: feature:345020-345155:1:exon
so has part: feature:345243-345437:1:exon

XP_036349380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337635-338321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339256-339351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:339442-339549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340304-340452:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340580-340707:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:343359-343496:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343874-344029:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:344456-344648:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:345020-345155:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:345243-345437:1:exon

LOC105942626
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105942626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(358557..363278)
location: region:358557-363278:-1
so has part: feature:358557-363278:-1:exon
subclass of: SO_0000011

105942626
type: Gene
SIO_000068: ncbigene

position:358557:-1
position: 358557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363278:-1
position: 363278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358557-363278:-1:exon

LOC105942626
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: lncRNA
gene: LOC105942626
product: uncharacterized LOC105942626
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001168504.1
SIO_010081: LOC105942626
subclass of: SO_0000673
so part of: LOC105942626
location: complement(join(358557..358744,362320..362450,363225..363278))
location: region:358557-363278:-1
so has part: feature:363225-363278:-1:exon
so has part: feature:362320-362450:-1:exon
so has part: feature:358557-358744:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363225-363278:-1:exon

position:363225:-1
position: 363225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:362320-362450:-1:exon

position:362320:-1
position: 362320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362450:-1
position: 362450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:358557-358744:-1:exon

position:358744:-1
position: 358744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118758039
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758039
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(368501..368601)
location: region:368501-368601:-1
so has part: feature:368501-368601:-1:exon

118758039
type: Gene
SIO_000068: ncbigene

position:368501:-1
position: 368501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368601:-1
position: 368601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368501-368601:-1:exon

LOC118758039
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118758039
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118758039
subclass of: SO_0000673
so part of: LOC118758039
location: complement(368501..368601)
location: region:368501-368601:-1
so has part: feature:368501-368601:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368501-368601:-1:exon

LOC101527280
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101527280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 410725..435169
location: region:410725-435169:1
so has part: feature:410725-435169:1:exon

101527280
type: Gene
SIO_000068: ncbigene

position:410725:1
position: 410725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435169:1
position: 435169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410725-435169:1:exon

LOC101527280
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101527280
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC101527280
subclass of: SO_0000673
so part of: LOC101527280
location: 410725..410796
location: region:410725-410796:1
so has part: feature:410725-410796:1:exon

position:410796:1
position: 410796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410725-410796:1:exon

LOC101527280
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101527280
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC101527280
subclass of: SO_0000673
so part of: LOC101527280
location: 421235..422125
location: region:421235-422125:1
so has part: feature:421235-422125:1:exon

position:421235:1
position: 421235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422125:1
position: 422125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421235-422125:1:exon

LOC118758040
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758040
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 432379..432479
location: region:432379-432479:1
so has part: feature:432379-432479:1:exon

118758040
type: Gene
SIO_000068: ncbigene

position:432379:1
position: 432379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432479:1
position: 432479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432379-432479:1:exon

LOC118758040
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118758040
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118758040
subclass of: SO_0000673
so part of: LOC118758040
location: 432379..432479
location: region:432379-432479:1
so has part: feature:432379-432479:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:432379-432479:1:exon

LOC101527280
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101527280
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC101527280
subclass of: SO_0000673
so part of: LOC101527280
location: 435095..435169
location: region:435095-435169:1
so has part: feature:435095-435169:1:exon

position:435095:1
position: 435095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435095-435169:1:exon

LOC118758035
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758035
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 469635..469746
location: region:469635-469746:1
so has part: feature:469635-469746:1:exon
subclass of: SO_0000623

118758035
type: Gene
SIO_000068: ncbigene

position:469635:1
position: 469635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469746:1
position: 469746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469635-469746:1:exon

LOC118758035
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758035
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995496.1
SIO_010081: LOC118758035
subclass of: SO_0000673
so part of: LOC118758035
location: 469635..469746
location: region:469635-469746:1
so has part: feature:469635-469746:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469635-469746:1:exon

LOC118758066
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758066
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 614922..615087
location: region:614922-615087:1
so has part: feature:614922-615087:1:exon

118758066
type: Gene
SIO_000068: ncbigene

position:614922:1
position: 614922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615087:1
position: 615087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614922-615087:1:exon

LOC118758066
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118758066
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118758066
subclass of: SO_0000673
so part of: LOC118758066
location: 614922..615087
location: region:614922-615087:1
so has part: feature:614922-615087:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614922-615087:1:exon

LOC101517375
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101517375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 621805..623099
location: region:621805-623099:1
so has part: feature:621805-623099:1:exon

101517375
type: Gene
SIO_000068: ncbigene

position:621805:1
position: 621805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623099:1
position: 623099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621805-623099:1:exon

LOC101517375
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101517375
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC101517375
subclass of: SO_0000673
so part of: LOC101517375
location: 621805..621863
location: region:621805-621863:1
so has part: feature:621805-621863:1:exon

position:621863:1
position: 621863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621805-621863:1:exon

LOC101517375
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101517375
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC101517375
subclass of: SO_0000673
so part of: LOC101517375
location: 622594..623099
location: region:622594-623099:1
so has part: feature:622594-623099:1:exon

position:622594:1
position: 622594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622594-623099:1:exon

LOC101530265
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101530265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(724809..729066)
location: region:724809-729066:-1
so has part: feature:724809-729066:-1:exon
subclass of: SO_0000010

101530265
type: Gene
SIO_000068: ncbigene

position:724809:-1
position: 724809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729066:-1
position: 729066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724809-729066:-1:exon

LOC101530265
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101530265
product: zinc finger protein 260-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_036493488.1
SIO_010081: LOC101530265
subclass of: SO_0000673
so part of: LOC101530265
location: complement(join(724809..725376,725458..726264,727794..727854,728453..728545,728786..728893,729060..729066))
location: region:724809-729066:-1
so has part: feature:729060-729066:-1:exon
so has part: feature:728786-728893:-1:exon
so has part: feature:728453-728545:-1:exon
so has part: feature:727794-727854:-1:exon
so has part: feature:725458-726264:-1:exon
so has part: feature:724809-725376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:729060-729066:-1:exon

position:729060:-1
position: 729060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:728786-728893:-1:exon

position:728786:-1
position: 728786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728893:-1
position: 728893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:728453-728545:-1:exon

position:728453:-1
position: 728453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728545:-1
position: 728545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:727794-727854:-1:exon

position:727794:-1
position: 727794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727854:-1
position: 727854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:725458-726264:-1:exon

position:725458:-1
position: 725458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726264:-1
position: 726264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:724809-725376:-1:exon

position:725376:-1
position: 725376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101530265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101530265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 260-like
translation: MPDVAVDFTQEEWQHMNNAQKTLYKDVMLETYSHLLSLGFCIAKPDVIFKLEQESVHRIGENSVNQGLPEPYKKNELLEANRGSQEGIFRNPDATPFGKKPASNVPRSQKTFHQKSYLIKHHKIYTGEKPYEGSKCGKAFCHKSSLITHQRIHTGEKPYQCSECGKAFSRPSAVITHWRIHTGEKPYQCPKCGKAFSQKSYLIKHQKIHTGDKPYKCIACPKAFFRPSSLIRHERIHAGEMLYECSQCKKAFCHKSHLITHQRIHTGEKPYKCSDCGKTFYEQSSLTRHQRVHTEQNLYQCSQCGKAFRWKSYLIIHRRIHTGEKPYECSQCAKAFCRKSHLIPHQRIHTGEKPYECTNECGKAFCQKSALIIHQKIHQGEKPYQCPKCGKAFSQKSYLIKHQKIHTEEKPYECNECGRAFFRPSALITHQRTHTGEKPYKCSECPKAFSQQSSLTKHQRVHTGEKPYECSECGKAFYRKSYLTTHQRIHTGEKPYECSECGKVFGQKSCLIRHQKIHTGEKPYMCNECGKSFYTQSSLIRHQRIHT
SIO_010081: LOC101530265
subclass of: SO_0000673
so part of: LOC101530265
location: complement(join(724809..725376,725458..726264,727794..727854,728453..728545,728786..728893,729060..729066))
location: region:724809-729066:-1
so has part: feature:729060-729066:-1:exon
so has part: feature:728786-728893:-1:exon
so has part: feature:728453-728545:-1:exon
so has part: feature:727794-727854:-1:exon
so has part: feature:725458-726264:-1:exon
so has part: feature:724809-725376:-1:exon

XP_036349381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:729060-729066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:728786-728893:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:728453-728545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:727794-727854:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:725458-726264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724809-725376:-1:exon

LOC118758058
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758058
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 781288..781450
location: region:781288-781450:1
so has part: feature:781288-781450:1:exon
subclass of: SO_0000623

118758058
type: Gene
SIO_000068: ncbigene

position:781288:1
position: 781288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781450:1
position: 781450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:781288-781450:1:exon

LOC118758058
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758058
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995513.1
SIO_010081: LOC118758058
subclass of: SO_0000673
so part of: LOC118758058
location: 781288..781450
location: region:781288-781450:1
so has part: feature:781288-781450:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:781288-781450:1:exon

LOC118758057
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758057
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 795100..795262
location: region:795100-795262:1
so has part: feature:795100-795262:1:exon
subclass of: SO_0000623

118758057
type: Gene
SIO_000068: ncbigene

position:795100:1
position: 795100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795262:1
position: 795262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795100-795262:1:exon

LOC118758057
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758057
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995512.1
SIO_010081: LOC118758057
subclass of: SO_0000673
so part of: LOC118758057
location: 795100..795262
location: region:795100-795262:1
so has part: feature:795100-795262:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:795100-795262:1:exon

LOC101517127
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101517127
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(817723..817947)
location: region:817723-817947:-1
so has part: feature:817723-817947:-1:exon
subclass of: SO_0000010

101517127
type: Gene
SIO_000068: ncbigene

position:817723:-1
position: 817723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817947:-1
position: 817947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817723-817947:-1:exon

LOC101517127
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101517127
product: cytochrome c oxidase assembly factor 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_036493465.1
SIO_010081: LOC101517127
subclass of: SO_0000673
so part of: LOC101517127
location: complement(817723..817947)
location: region:817723-817947:-1
so has part: feature:817723-817947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:817723-817947:-1:exon

LOC101517127
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101517127
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly factor 5-like
translation: MPRYYEDKPEGGACSGVKEDLGACLLQSDCVLQEGKSPGQCLKDGHCQALKYSFFECKRSMLEDRSRFRGRKGY
SIO_010081: LOC101517127
subclass of: SO_0000673
so part of: LOC101517127
location: complement(817723..817947)
location: region:817723-817947:-1
so has part: feature:817723-817947:-1:exon

XP_036349358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:817723-817947:-1:exon

LOC118758060
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758060
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(879457..879619)
location: region:879457-879619:-1
so has part: feature:879457-879619:-1:exon
subclass of: SO_0000623

118758060
type: Gene
SIO_000068: ncbigene

position:879457:-1
position: 879457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879619:-1
position: 879619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879457-879619:-1:exon

LOC118758060
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758060
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995515.1
SIO_010081: LOC118758060
subclass of: SO_0000673
so part of: LOC118758060
location: complement(879457..879619)
location: region:879457-879619:-1
so has part: feature:879457-879619:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:879457-879619:-1:exon

LOC118758082
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758082
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1274321..1274423
location: region:1274321-1274423:1
so has part: feature:1274321-1274423:1:exon
subclass of: SO_0000623

118758082
type: Gene
SIO_000068: ncbigene

position:1274321:1
position: 1274321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274423:1
position: 1274423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1274321-1274423:1:exon

LOC118758082
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758082
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995519.1
SIO_010081: LOC118758082
subclass of: SO_0000673
so part of: LOC118758082
location: 1274321..1274423
location: region:1274321-1274423:1
so has part: feature:1274321-1274423:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1274321-1274423:1:exon

ATP12A
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ATP12A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1294388..1321026
location: region:1294388-1321026:1
so has part: feature:1294388-1321026:1:exon
subclass of: SO_0000010

101519902
type: Gene
SIO_000068: ncbigene

position:1294388:1
position: 1294388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1321026:1
position: 1321026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294388-1321026:1:exon

ATP12A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ATP12A
product: ATPase H+/K+ transporting non-gastric alpha2 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 5 Proteins
transcript id: XM_012926783.1
SIO_010081: ATP12A
subclass of: SO_0000673
so part of: ATP12A
location: join(1294388..1294443,1299202..1299462,1299965..1300163,1302870..1302929,1304074..1304277,1305105..1305218,1306108..1306242,1306343..1306460,1306644..1306912,1307852..1308050,1308206..1308315,1309753..1309887,1312378..1312570,1314742..1314917,1315543..1315679,1316917..1317067,1317474..1317642,1317730..1317884,1318646..1318769,1318935..1319080,1319684..1319817,1319969..1320070,1320814..1320905,1320993..1321026)
location: region:1294388-1321026:1
so has part: feature:1294388-1294443:1:exon
so has part: feature:1299202-1299462:1:exon
so has part: feature:1299965-1300163:1:exon
so has part: feature:1302870-1302929:1:exon
so has part: feature:1304074-1304277:1:exon
so has part: feature:1305105-1305218:1:exon
so has part: feature:1306108-1306242:1:exon
so has part: feature:1306343-1306460:1:exon
so has part: feature:1306644-1306912:1:exon
so has part: feature:1307852-1308050:1:exon
so has part: feature:1308206-1308315:1:exon
so has part: feature:1309753-1309887:1:exon
so has part: feature:1312378-1312570:1:exon
so has part: feature:1314742-1314917:1:exon
so has part: feature:1315543-1315679:1:exon
so has part: feature:1316917-1317067:1:exon
so has part: feature:1317474-1317642:1:exon
so has part: feature:1317730-1317884:1:exon
so has part: feature:1318646-1318769:1:exon
so has part: feature:1318935-1319080:1:exon
so has part: feature:1319684-1319817:1:exon
so has part: feature:1319969-1320070:1:exon
so has part: feature:1320814-1320905:1:exon
so has part: feature:1320993-1321026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294388-1294443:1:exon

position:1294443:1
position: 1294443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1299202-1299462:1:exon

position:1299202:1
position: 1299202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299462:1
position: 1299462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1299965-1300163:1:exon

position:1299965:1
position: 1299965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300163:1
position: 1300163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1302870-1302929:1:exon

position:1302870:1
position: 1302870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1302929:1
position: 1302929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1304074-1304277:1:exon

position:1304074:1
position: 1304074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1304277:1
position: 1304277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1305105-1305218:1:exon

position:1305105:1
position: 1305105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1305218:1
position: 1305218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1306108-1306242:1:exon

position:1306108:1
position: 1306108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306242:1
position: 1306242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1306343-1306460:1:exon

position:1306343:1
position: 1306343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306460:1
position: 1306460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1306644-1306912:1:exon

position:1306644:1
position: 1306644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306912:1
position: 1306912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1307852-1308050:1:exon

position:1307852:1
position: 1307852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1308050:1
position: 1308050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1308206-1308315:1:exon

position:1308206:1
position: 1308206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1308315:1
position: 1308315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1309753-1309887:1:exon

position:1309753:1
position: 1309753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1309887:1
position: 1309887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1312378-1312570:1:exon

position:1312378:1
position: 1312378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1312570:1
position: 1312570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1314742-1314917:1:exon

position:1314742:1
position: 1314742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314917:1
position: 1314917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1315543-1315679:1:exon

position:1315543:1
position: 1315543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1315679:1
position: 1315679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1316917-1317067:1:exon

position:1316917:1
position: 1316917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317067:1
position: 1317067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1317474-1317642:1:exon

position:1317474:1
position: 1317474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317642:1
position: 1317642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1317730-1317884:1:exon

position:1317730:1
position: 1317730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317884:1
position: 1317884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1318646-1318769:1:exon

position:1318646:1
position: 1318646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1318769:1
position: 1318769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1318935-1319080:1:exon

position:1318935:1
position: 1318935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319080:1
position: 1319080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1319684-1319817:1:exon

position:1319684:1
position: 1319684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319817:1
position: 1319817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1319969-1320070:1:exon

position:1319969:1
position: 1319969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320070:1
position: 1320070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1320814-1320905:1:exon

position:1320814:1
position: 1320814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320905:1
position: 1320905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1320993-1321026:1:exon

position:1320993:1
position: 1320993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP12A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ATP12A
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1299993..1299995,aa:OTHER)
product: LOW QUALITY PROTEIN: potassium-transporting ATPase alpha chain 2
translation: MGGDKNAEVEDKRYKVANRATYAVAGAWAGRAAFKADDTSPGQRLAIGCGGARRTSEVVGTSITNTVANTNAAAAGPDHRSIHCRCLGSPSLQQLAPGAPRTTCARRERPFRKPTXGQPCTLLLFQKKVNIYSVELDPAADSKRTERSGKKDNDSELKRNQQKEELKKELDLDDHKLSPKDLEKRYGTDIIRGLSSARAAELLAQNGPNALTPPKQTPEIIKFLKQMVGGFSILLWIGAILCWIAYGIQYVNNPSVSLDNVYLGAVLAVVVVLTGIFAYYQEAKSTNIMASFNKMIPQQALVIRDSEKKVIPADQLVVGDIVEIKGGDQIPADLRLLAAQGCKVDNSSLTGESEPQSRSTECTHENPLETKNISFYSTTCLEGTATGMVINTGDRTIIGRIASLASGVGNEKTPIALEIEHFVHIVAGVAVSVGILFFIIMVSMKYYILDAIIFLIAIIVANVPEGLLATVTVSLSLTAKRMAKKNCLVKNLEAVETLGSTSIICSDKTGTLTQNRMTVAHLWFDNQIFVADTSEDNLNQAFDQSSGTWTSLSKIITLCNRAEFRPGQENVPIMKRIVVGDASETALLKFSEVVLGDVMEIRRRNHKVVEIPFNSTNKFQLSIHRMEDPNDKRFLLVMKGAPERILEKCSTIMIHGEEQPLDQNNAQAFHTAYMELGGLGERVLGFCHFYLPTDEFPEDYSFDSETMNFPTSNFCFVGLLSMIDPPRSTVPDAVSKCRSAGIKVIMVTGDHPITAKAIAKNVGIISANSETVEDIAKRCNIAVEQVNKREAKAAVVTGMELKDMSQQQLDELLVNYPEIVFARTSPQQKLIIVEGCQRQDAVVAVTGDGVNDSPALKKADIGIAMGIAGSDAAKNTADMILLDDNFASIVTGVEEGRLIFDNLKKTIAYTLTKNFAELCPFLIYIVVGLPLPIGTITLLFIDLGTDIIPSIALAYEKAESDIMNRKPRHKKKDRLVNDQLAIYSYLHIGLMQSLGGFLLYFTVYAQQGFRPTTLFYLRETWESDYVNDLEDNYGQEWTRYQREYLEWTGYTAFFVAIMVQQIADLIIRKTRRNSIFQQGLFRNKVIWVGIASQIIVALLLSYGLGSIPALSFTMLRAQYWFVAVPHAILIWVYDEMRKFFIRRYPESWWDKNMYY
SIO_010081: ATP12A
subclass of: SO_0000673
so part of: ATP12A
location: join(1294388..1294443,1299202..1299462,1299965..1300163,1302870..1302929,1304074..1304277,1305105..1305218,1306108..1306242,1306343..1306460,1306644..1306912,1307852..1308050,1308206..1308315,1309753..1309887,1312378..1312570,1314742..1314917,1315543..1315679,1316917..1317067,1317474..1317642,1317730..1317884,1318646..1318769,1318935..1319080,1319684..1319817,1319969..1320070,1320814..1320905,1320993..1321021)
location: region:1294388-1321021:1
so has part: feature:1294388-1294443:1:exon
so has part: feature:1299202-1299462:1:exon
so has part: feature:1299965-1300163:1:exon
so has part: feature:1302870-1302929:1:exon
so has part: feature:1304074-1304277:1:exon
so has part: feature:1305105-1305218:1:exon
so has part: feature:1306108-1306242:1:exon
so has part: feature:1306343-1306460:1:exon
so has part: feature:1306644-1306912:1:exon
so has part: feature:1307852-1308050:1:exon
so has part: feature:1308206-1308315:1:exon
so has part: feature:1309753-1309887:1:exon
so has part: feature:1312378-1312570:1:exon
so has part: feature:1314742-1314917:1:exon
so has part: feature:1315543-1315679:1:exon
so has part: feature:1316917-1317067:1:exon
so has part: feature:1317474-1317642:1:exon
so has part: feature:1317730-1317884:1:exon
so has part: feature:1318646-1318769:1:exon
so has part: feature:1318935-1319080:1:exon
so has part: feature:1319684-1319817:1:exon
so has part: feature:1319969-1320070:1:exon
so has part: feature:1320814-1320905:1:exon
so has part: feature:1320993-1321021:1:exon

XP_012782237.1
type: Protein
SIO_000068: ncbiprotein

position:1321021:1
position: 1321021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294388-1294443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299202-1299462:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1299965-1300163:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1302870-1302929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1304074-1304277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1305105-1305218:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1306108-1306242:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1306343-1306460:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1306644-1306912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1307852-1308050:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1308206-1308315:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1309753-1309887:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1312378-1312570:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1314742-1314917:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1315543-1315679:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1316917-1317067:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1317474-1317642:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1317730-1317884:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1318646-1318769:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1318935-1319080:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1319684-1319817:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1319969-1320070:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1320814-1320905:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1320993-1321021:1:exon

RNF17
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RNF17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1340239..1454185
location: region:1340239-1454185:1
so has part: feature:1340239-1454185:1:exon
subclass of: SO_0000010

101519653
type: Gene
SIO_000068: ncbigene

position:1340239:1
position: 1340239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1454185:1
position: 1454185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340239-1454185:1:exon

RNF17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RNF17
product: ring finger protein 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577719.2
SIO_010081: RNF17
subclass of: SO_0000673
so part of: RNF17
location: join(1340239..1340400,1345033..1345127,1355099..1355190,1357865..1357982,1359172..1359252,1370824..1370924,1376777..1376948,1378317..1378393,1378593..1378667,1383503..1383789,1384472..1384561,1392470..1392659,1393146..1393314,1394467..1394657,1395579..1395720,1400397..1400550,1401778..1401893,1407121..1407241,1410467..1410587,1418753..1418980,1419524..1419674,1419812..1419930,1422205..1422295,1424888..1425003,1428763..1429061,1431164..1431327,1433393..1433512,1435057..1435137,1440492..1440617,1442251..1442307,1445524..1445640,1446805..1446973,1447082..1447206,1453632..1453731,1454009..1454185)
location: region:1340239-1454185:1
so has part: feature:1340239-1340400:1:exon
so has part: feature:1345033-1345127:1:exon
so has part: feature:1355099-1355190:1:exon
so has part: feature:1357865-1357982:1:exon
so has part: feature:1359172-1359252:1:exon
so has part: feature:1370824-1370924:1:exon
so has part: feature:1376777-1376948:1:exon
so has part: feature:1378317-1378393:1:exon
so has part: feature:1378593-1378667:1:exon
so has part: feature:1383503-1383789:1:exon
so has part: feature:1384472-1384561:1:exon
so has part: feature:1392470-1392659:1:exon
so has part: feature:1393146-1393314:1:exon
so has part: feature:1394467-1394657:1:exon
so has part: feature:1395579-1395720:1:exon
so has part: feature:1400397-1400550:1:exon
so has part: feature:1401778-1401893:1:exon
so has part: feature:1407121-1407241:1:exon
so has part: feature:1410467-1410587:1:exon
so has part: feature:1418753-1418980:1:exon
so has part: feature:1419524-1419674:1:exon
so has part: feature:1419812-1419930:1:exon
so has part: feature:1422205-1422295:1:exon
so has part: feature:1424888-1425003:1:exon
so has part: feature:1428763-1429061:1:exon
so has part: feature:1431164-1431327:1:exon
so has part: feature:1433393-1433512:1:exon
so has part: feature:1435057-1435137:1:exon
so has part: feature:1440492-1440617:1:exon
so has part: feature:1442251-1442307:1:exon
so has part: feature:1445524-1445640:1:exon
so has part: feature:1446805-1446973:1:exon
so has part: feature:1447082-1447206:1:exon
so has part: feature:1453632-1453731:1:exon
so has part: feature:1454009-1454185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1340239-1340400:1:exon

position:1340400:1
position: 1340400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1345033-1345127:1:exon

position:1345033:1
position: 1345033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1345127:1
position: 1345127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1355099-1355190:1:exon

position:1355099:1
position: 1355099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1355190:1
position: 1355190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1357865-1357982:1:exon

position:1357865:1
position: 1357865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357982:1
position: 1357982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1359172-1359252:1:exon

position:1359172:1
position: 1359172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359252:1
position: 1359252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1370824-1370924:1:exon

position:1370824:1
position: 1370824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370924:1
position: 1370924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1376777-1376948:1:exon

position:1376777:1
position: 1376777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376948:1
position: 1376948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1378317-1378393:1:exon

position:1378317:1
position: 1378317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378393:1
position: 1378393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1378593-1378667:1:exon

position:1378593:1
position: 1378593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378667:1
position: 1378667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1383503-1383789:1:exon

position:1383503:1
position: 1383503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383789:1
position: 1383789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1384472-1384561:1:exon

position:1384472:1
position: 1384472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384561:1
position: 1384561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1392470-1392659:1:exon

position:1392470:1
position: 1392470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392659:1
position: 1392659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1393146-1393314:1:exon

position:1393146:1
position: 1393146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393314:1
position: 1393314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1394467-1394657:1:exon

position:1394467:1
position: 1394467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1394657:1
position: 1394657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1395579-1395720:1:exon

position:1395579:1
position: 1395579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1395720:1
position: 1395720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1400397-1400550:1:exon

position:1400397:1
position: 1400397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400550:1
position: 1400550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1401778-1401893:1:exon

position:1401778:1
position: 1401778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401893:1
position: 1401893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1407121-1407241:1:exon

position:1407121:1
position: 1407121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1407241:1
position: 1407241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1410467-1410587:1:exon

position:1410467:1
position: 1410467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1410587:1
position: 1410587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1418753-1418980:1:exon

position:1418753:1
position: 1418753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1418980:1
position: 1418980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1419524-1419674:1:exon

position:1419524:1
position: 1419524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419674:1
position: 1419674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1419812-1419930:1:exon

position:1419812:1
position: 1419812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419930:1
position: 1419930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1422205-1422295:1:exon

position:1422205:1
position: 1422205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1422295:1
position: 1422295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1424888-1425003:1:exon

position:1424888:1
position: 1424888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425003:1
position: 1425003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1428763-1429061:1:exon

position:1428763:1
position: 1428763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429061:1
position: 1429061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1431164-1431327:1:exon

position:1431164:1
position: 1431164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431327:1
position: 1431327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1433393-1433512:1:exon

position:1433393:1
position: 1433393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1433512:1
position: 1433512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1435057-1435137:1:exon

position:1435057:1
position: 1435057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1435137:1
position: 1435137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1440492-1440617:1:exon

position:1440492:1
position: 1440492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1440617:1
position: 1440617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1442251-1442307:1:exon

position:1442251:1
position: 1442251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1442307:1
position: 1442307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1445524-1445640:1:exon

position:1445524:1
position: 1445524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445640:1
position: 1445640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1446805-1446973:1:exon

position:1446805:1
position: 1446805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446973:1
position: 1446973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1447082-1447206:1:exon

position:1447082:1
position: 1447082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447206:1
position: 1447206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1453632-1453731:1:exon

position:1453632:1
position: 1453632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453731:1
position: 1453731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1454009-1454185:1:exon

position:1454009:1
position: 1454009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RNF17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 17
translation: MASEPSKAWPAVISCPQLGRKSRPWDVGETQCSRCGRSVAHGHHNELQCGHTFCELCLLIPKEHSTLMCPDCKVASPVIMKQGHYSMDEYIKEDSFIGKLQPKTLKKCPHDFKKNADEPAVGIEAEHSTSVPRTLMNSSAVTLEAKTTEEIDEALKVAGYNVEQLRTAVQVLEHIQNRTKEETNSLIQVMEKQFDQLFASLNSRKKKLCEELVRSTDDYLAHLVMAENHIEEKRKDLDAAMKIAAELKSAPSLRTYCDLNQIIRTLKLTFESELSQVSSLKLRNSPRLNMNCSEIICMLSNIGKIEFENSTKYHPQENETIQNVQRKYNKKAFCCPDTYFSPEEKKEDMSLLSSEALETNSVHLEIRNTPPHKEMVAVTPPKAIAVLPQMGSSPDVIIEEFIDENLETCSADGLVEAPAYPEEPLQKEPSVCFGSQTGARIFVHSIENGMWCRGTITELIPKENKNKRKSCGPTRFSVCEVALMQIFMVDFGNSEVLIVTGVGDSQMKPEHITEQHVFLNDLCLVLRKPEPFIERLLKEIPSLAQPCSLKDIVPQNSNEGWEDEAKVEFLKMVNNKAVLMKVFREEDGVLIVDLQKPPTNKISSDMPVSLRDALVFMELARFRLQSTRSHSEKNPTLHYHPPILPKEMTDVSVLVCHINSPTDFYIQVLENQDFLILLKTIEEFYESEDGDNLEILCPVQDQACVAKFEDGVWYRAKVTGLPGLREVEVKYVDFGNTAKITRKEMRKIKDEFMDLPEKAIKCKLAYIEPYKRTTKWSRKAKEKFEEKTQDKFMTCSVIKIFEDNVLLVELYDAVGIPGMSLTSINEQLVKEGVASYEGRYTLKNNSEKHTEVWDPSPEEIISNEVKNFSAVSARSLPDENLQSLYNKELPVHICNVVSPEKIYVQWLLTENLINSLEEKMIAAYEHSKWEPVKWENDMHCAVKVPENNQWRRGQIISVVTDTLVEVLLYDVGVEVVVNINCLRELEESLKTMGRLSLECSLVDIRPTGGSNKWTATACDCLSLYLTGAVATIILQDNSTTWPLPVKIFCRDEKGERVDVSKYLIKKGLALRERRVNKLADSCSASEKSLELPPEQKDSVTTKCTELSLDPDKTSADTTDEHNVNTVHDLKETISEPRAPGCYKPPTIPKMKVFDAVVSCIGDDGTIFIVPKLSELELSKMMNEIQNNLKCLGLLEPYLWKKGEACAIRGSDTLWYRGKVVEVAGSTIKVQYLDHGFTEKIPQCHLYPVLLHPDIPQFCIPCQLHHTVPVGNVWQSDSIELLQELLSKREVEIHVMELPENPWEKLSVLLYFDGMSLSYFMAHYKFCTSDHSEEILKERPTDYDKNYEVERWEINFEELLLSETETPIVPAYVSSSLPPPGELFAVQVKHVVSPNEVYICLDSVESCNQFNHHSDTDDSGVSWDSEPESLEEALRRSNKNVDTFPPLTDFRTGLPVAHLSHFPDQEGELKRSDSFVSIFTFQRSGCVEKLRKEDAQTPEQVVTLYDDEQCPVHMSLVEMGLADKDD
SIO_010081: RNF17
subclass of: SO_0000673
so part of: RNF17
location: join(1340277..1340400,1345033..1345127,1355099..1355190,1357865..1357982,1359172..1359252,1370824..1370924,1376777..1376948,1378317..1378393,1378593..1378667,1383503..1383789,1384472..1384561,1392470..1392659,1393146..1393314,1394467..1394657,1395579..1395720,1400397..1400550,1401778..1401893,1407121..1407241,1410467..1410587,1418753..1418980,1419524..1419674,1419812..1419930,1422205..1422295,1424888..1425003,1428763..1429061,1431164..1431327,1433393..1433512,1435057..1435137,1440492..1440617,1442251..1442307,1445524..1445640,1446805..1446973,1447082..1447206,1453632..1453730)
location: region:1340277-1453730:1
so has part: feature:1340277-1340400:1:exon
so has part: feature:1345033-1345127:1:exon
so has part: feature:1355099-1355190:1:exon
so has part: feature:1357865-1357982:1:exon
so has part: feature:1359172-1359252:1:exon
so has part: feature:1370824-1370924:1:exon
so has part: feature:1376777-1376948:1:exon
so has part: feature:1378317-1378393:1:exon
so has part: feature:1378593-1378667:1:exon
so has part: feature:1383503-1383789:1:exon
so has part: feature:1384472-1384561:1:exon
so has part: feature:1392470-1392659:1:exon
so has part: feature:1393146-1393314:1:exon
so has part: feature:1394467-1394657:1:exon
so has part: feature:1395579-1395720:1:exon
so has part: feature:1400397-1400550:1:exon
so has part: feature:1401778-1401893:1:exon
so has part: feature:1407121-1407241:1:exon
so has part: feature:1410467-1410587:1:exon
so has part: feature:1418753-1418980:1:exon
so has part: feature:1419524-1419674:1:exon
so has part: feature:1419812-1419930:1:exon
so has part: feature:1422205-1422295:1:exon
so has part: feature:1424888-1425003:1:exon
so has part: feature:1428763-1429061:1:exon
so has part: feature:1431164-1431327:1:exon
so has part: feature:1433393-1433512:1:exon
so has part: feature:1435057-1435137:1:exon
so has part: feature:1440492-1440617:1:exon
so has part: feature:1442251-1442307:1:exon
so has part: feature:1445524-1445640:1:exon
so has part: feature:1446805-1446973:1:exon
so has part: feature:1447082-1447206:1:exon
so has part: feature:1453632-1453730:1:exon

XP_004577776.1
type: Protein
SIO_000068: ncbiprotein

position:1340277:1
position: 1340277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453730:1
position: 1453730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340277-1340400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345033-1345127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1355099-1355190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1357865-1357982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359172-1359252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1370824-1370924:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1376777-1376948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1378317-1378393:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1378593-1378667:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1383503-1383789:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1384472-1384561:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1392470-1392659:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1393146-1393314:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1394467-1394657:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1395579-1395720:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1400397-1400550:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1401778-1401893:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1407121-1407241:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1410467-1410587:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1418753-1418980:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1419524-1419674:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1419812-1419930:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1422205-1422295:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1424888-1425003:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1428763-1429061:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1431164-1431327:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1433393-1433512:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1435057-1435137:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1440492-1440617:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1442251-1442307:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1445524-1445640:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1446805-1446973:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1447082-1447206:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1453632-1453730:1:exon

LOC105941707
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105941707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1427138..1428139)
location: region:1427138-1428139:-1
so has part: feature:1427138-1428139:-1:exon
subclass of: SO_0000010

105941707
type: Gene
SIO_000068: ncbigene

position:1427138:-1
position: 1427138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428139:-1
position: 1428139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427138-1428139:-1:exon

LOC105941707
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC105941707
product: 40S ribosomal protein S14-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493489.1
SIO_010081: LOC105941707
subclass of: SO_0000673
so part of: LOC105941707
location: complement(join(1427138..1427666,1428119..1428139))
location: region:1427138-1428139:-1
so has part: feature:1428119-1428139:-1:exon
so has part: feature:1427138-1427666:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1428119-1428139:-1:exon

position:1428119:-1
position: 1428119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1427138-1427666:-1:exon

position:1427666:-1
position: 1427666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105941707
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC105941707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S14-like
translation: MGRGNERRSGGKTCRNSKGTEKEEKQAISLGPQVAKGENGFGVCHIFASFNDTFVHITDLSGKETICCMTGGKKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKRRATGRNRTKTPGPGAQSALRALGRSGMKIRRIEDVTPIPSNSTRRKGGHRGRRL
SIO_010081: LOC105941707
subclass of: SO_0000673
so part of: LOC105941707
location: complement(join(1427193..1427666,1428119..1428139))
location: region:1427193-1428139:-1
so has part: feature:1428119-1428139:-1:exon
so has part: feature:1427193-1427666:-1:exon

XP_036349382.1
type: Protein
SIO_000068: ncbiprotein

position:1427193:-1
position: 1427193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1428119-1428139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427193-1427666:-1:exon

CENPJ
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CENPJ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1456329..1503654)
location: region:1456329-1503654:-1
so has part: feature:1456329-1503654:-1:exon
subclass of: SO_0000010

101519408
type: Gene
SIO_000068: ncbigene

position:1456329:-1
position: 1456329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1503654:-1
position: 1503654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1456329-1503654:-1:exon

CENPJ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CENPJ
product: centromere protein J
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012926779.2
SIO_010081: CENPJ
subclass of: SO_0000673
so part of: CENPJ
location: complement(join(1456329..1456663,1459741..1459861,1459958..1460042,1460108..1460245,1460843..1460965,1461160..1461224,1471470..1471716,1487767..1487932,1494735..1494867,1496662..1498309,1498440..1498542,1499308..1499407,1500334..1500615,1502581..1502704,1503214..1503654))
location: region:1456329-1503654:-1
so has part: feature:1503214-1503654:-1:exon
so has part: feature:1502581-1502704:-1:exon
so has part: feature:1500334-1500615:-1:exon
so has part: feature:1499308-1499407:-1:exon
so has part: feature:1498440-1498542:-1:exon
so has part: feature:1496662-1498309:-1:exon
so has part: feature:1494735-1494867:-1:exon
so has part: feature:1487767-1487932:-1:exon
so has part: feature:1471470-1471716:-1:exon
so has part: feature:1461160-1461224:-1:exon
so has part: feature:1460843-1460965:-1:exon
so has part: feature:1460108-1460245:-1:exon
so has part: feature:1459958-1460042:-1:exon
so has part: feature:1459741-1459861:-1:exon
so has part: feature:1456329-1456663:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1503214-1503654:-1:exon

position:1503214:-1
position: 1503214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1502581-1502704:-1:exon

position:1502581:-1
position: 1502581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1502704:-1
position: 1502704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1500334-1500615:-1:exon

position:1500334:-1
position: 1500334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1500615:-1
position: 1500615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1499308-1499407:-1:exon

position:1499308:-1
position: 1499308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499407:-1
position: 1499407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1498440-1498542:-1:exon

position:1498440:-1
position: 1498440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498542:-1
position: 1498542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1496662-1498309:-1:exon

position:1496662:-1
position: 1496662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498309:-1
position: 1498309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1494735-1494867:-1:exon

position:1494735:-1
position: 1494735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494867:-1
position: 1494867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1487767-1487932:-1:exon

position:1487767:-1
position: 1487767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487932:-1
position: 1487932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1471470-1471716:-1:exon

position:1471470:-1
position: 1471470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471716:-1
position: 1471716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1461160-1461224:-1:exon

position:1461160:-1
position: 1461160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1461224:-1
position: 1461224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1460843-1460965:-1:exon

position:1460843:-1
position: 1460843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460965:-1
position: 1460965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1460108-1460245:-1:exon

position:1460108:-1
position: 1460108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460245:-1
position: 1460245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1459958-1460042:-1:exon

position:1459958:-1
position: 1459958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460042:-1
position: 1460042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1459741-1459861:-1:exon

position:1459741:-1
position: 1459741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1459861:-1
position: 1459861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1456329-1456663:-1:exon

position:1456663:-1
position: 1456663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CENPJ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CENPJ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein J
translation: MFLTPASELSSGQNFLSQWITNPSRAGVILNRGFPVLEADEKKRTSEEICASFPVKATRLSDSFSFVGEGEPLYGEQQLDSSGTRRPQADTPEARTVFPSIKKGPQGVVCQDVCRSQEDGKSDFIPALGSEFREVAYKDPLLKKLEQLKEVQQKKQEQLKKQQLEQLQRLVEEQEKLLGMVPGPRTLPALLPDEQNRKCGSPGHPVAREKTVPFLPSYVFSNQAQDNAHACSVLPDDHISACTQQVASASRSASPGWCYEAQGPDELVKSDAGEEGQNHAAGGEGVLSMTEQILGQSDMTFKKIDDSSEVLNIEERPIKAVLSERKQTFEDYLEEQIRLEEQERKQKQMREAEGPGLIKAKPKQPFLKRGEGLARFSNAKSKVQKGKESRPVSGQSAAEDQPVFQMERPQFQRKTAVRNKELSAESPAVKRLSKVRSRSAAVTLSQKLHVPKSNNRKSLSPSGLKIQAGKKWDGQPRDHSRLDRKVELPNSKEDAPECADPADPGGRVRTKAPGQDRRPLSPGQLASAAPRAPTSETVKALESSLDVSLQKKMETWEREKEKENLELDEFLFLEQAADEISFSSNSSFVLKILARDQQACQGHRLSSTPMKAVQPERAHPRGADGQGDHREGPSRAARENRSECDVAPHPRGPASSPEGPREWSCNIRRKACQKNGLSSSENRAPWEASDEVDVTDSDDGADSEEQLDVTVRPLPEEAGRSLSSVEESPQVCDGMGPSKDAQTQQEKRDAELDLSAKDCSTDGCIMAEGMRNLGSETSRRPSSPNMSTIDFDDERTWTDLEENLCQHDAVLEDEAVYGTPQTHSLNRSDVCVLDKTLKRKVAPVKRGEDSSKAGRSRSPPPASELMMKFFPSLKPRPRPKADSPLDNGPKLNTSPDQLPDDGARSQILREKVIELETEIEKFKAENTSLANLRIERERALEKLRKEIADFEQQKAKELARIEEYKKEEIKKLQRERKVFEKYTTVARTFPDKKEREEIQALKQQVADLQEDLKRKEAKWSSAHGRLRSQIEMLVRENTDLREEIKVMERFRLDAWKKAEAIESSPKAQVRATAGKQPEAVAGNPSRESKVVLPRELSSSDKRQRASPREQVEPADFPESHNKENKDDNEDEEDIETAISHPDGKVEKVYKNGCRVTLFPNGTRKEVSADRTVTVTFFNGDVKQVMPDERVVYYYAAAQTTHTTYPEGLQVLHFSSGQIEKHFPDGRKEITFPDQTVKNLFADGQEESIFPDGTIVRIQCDGNKIIQFSNGQRELHTAQFKRREYPDGTVKTVYTNGRQETKYTSGRIRVKDKDGNILLDTEL
SIO_010081: CENPJ
subclass of: SO_0000673
so part of: CENPJ
location: complement(join(1456471..1456663,1459741..1459861,1459958..1460042,1460108..1460245,1460843..1460965,1461160..1461224,1471470..1471716,1487767..1487932,1494735..1494867,1496662..1498309,1498440..1498542,1499308..1499407,1500334..1500615,1502581..1502704,1503214..1503654))
location: region:1456471-1503654:-1
so has part: feature:1503214-1503654:-1:exon
so has part: feature:1502581-1502704:-1:exon
so has part: feature:1500334-1500615:-1:exon
so has part: feature:1499308-1499407:-1:exon
so has part: feature:1498440-1498542:-1:exon
so has part: feature:1496662-1498309:-1:exon
so has part: feature:1494735-1494867:-1:exon
so has part: feature:1487767-1487932:-1:exon
so has part: feature:1471470-1471716:-1:exon
so has part: feature:1461160-1461224:-1:exon
so has part: feature:1460843-1460965:-1:exon
so has part: feature:1460108-1460245:-1:exon
so has part: feature:1459958-1460042:-1:exon
so has part: feature:1459741-1459861:-1:exon
so has part: feature:1456471-1456663:-1:exon

XP_012782233.1
type: Protein
SIO_000068: ncbiprotein

position:1456471:-1
position: 1456471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1503214-1503654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1502581-1502704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1500334-1500615:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1499308-1499407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498440-1498542:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1496662-1498309:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1494735-1494867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1487767-1487932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1471470-1471716:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1461160-1461224:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1460843-1460965:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1460108-1460245:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1459958-1460042:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1459741-1459861:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1456471-1456663:-1:exon

LOC101519168
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101519168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1509979..1511175)
location: region:1509979-1511175:-1
so has part: feature:1509979-1511175:-1:exon

101519168
type: Gene
SIO_000068: ncbigene

position:1509979:-1
position: 1509979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511175:-1
position: 1511175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1509979-1511175:-1:exon

LOC101519168
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101519168
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC101519168
subclass of: SO_0000673
so part of: LOC101519168
location: complement(1509979..1511175)
location: region:1509979-1511175:-1
so has part: feature:1509979-1511175:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1509979-1511175:-1:exon

PARP4
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1532586..1602908
location: region:1532586-1602908:1
so has part: feature:1532586-1602908:1:exon
subclass of: SO_0000010

101518913
type: Gene
SIO_000068: ncbigene

position:1532586:1
position: 1532586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602908:1
position: 1602908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1532586-1602908:1:exon

PARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PARP4
product: poly(ADP-ribose) polymerase family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012926772.1
SIO_010081: PARP4
subclass of: SO_0000673
so part of: PARP4
location: join(1532586..1532717,1534721..1534922,1537732..1537798,1538499..1538574,1539690..1539803,1544107..1544256,1545219..1545356,1548284..1548457,1554051..1554211,1555255..1555392,1556675..1556770,1558202..1558385,1558597..1558756,1560307..1560431,1563628..1563759,1565432..1565518,1566807..1566971,1567541..1567587,1567731..1567809,1572769..1572906,1573295..1573490,1575475..1575542,1576358..1576545,1577716..1577815,1581061..1581231,1581476..1581556,1583692..1583772,1584720..1584815,1585360..1585482,1595701..1595864,1596414..1596858,1598337..1598436,1601069..1601201,1602546..1602908)
location: region:1532586-1602908:1
so has part: feature:1532586-1532717:1:exon
so has part: feature:1534721-1534922:1:exon
so has part: feature:1537732-1537798:1:exon
so has part: feature:1538499-1538574:1:exon
so has part: feature:1539690-1539803:1:exon
so has part: feature:1544107-1544256:1:exon
so has part: feature:1545219-1545356:1:exon
so has part: feature:1548284-1548457:1:exon
so has part: feature:1554051-1554211:1:exon
so has part: feature:1555255-1555392:1:exon
so has part: feature:1556675-1556770:1:exon
so has part: feature:1558202-1558385:1:exon
so has part: feature:1558597-1558756:1:exon
so has part: feature:1560307-1560431:1:exon
so has part: feature:1563628-1563759:1:exon
so has part: feature:1565432-1565518:1:exon
so has part: feature:1566807-1566971:1:exon
so has part: feature:1567541-1567587:1:exon
so has part: feature:1567731-1567809:1:exon
so has part: feature:1572769-1572906:1:exon
so has part: feature:1573295-1573490:1:exon
so has part: feature:1575475-1575542:1:exon
so has part: feature:1576358-1576545:1:exon
so has part: feature:1577716-1577815:1:exon
so has part: feature:1581061-1581231:1:exon
so has part: feature:1581476-1581556:1:exon
so has part: feature:1583692-1583772:1:exon
so has part: feature:1584720-1584815:1:exon
so has part: feature:1585360-1585482:1:exon
so has part: feature:1595701-1595864:1:exon
so has part: feature:1596414-1596858:1:exon
so has part: feature:1598337-1598436:1:exon
so has part: feature:1601069-1601201:1:exon
so has part: feature:1602546-1602908:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1532586-1532717:1:exon

position:1532717:1
position: 1532717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1534721-1534922:1:exon

position:1534721:1
position: 1534721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1534922:1
position: 1534922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1537732-1537798:1:exon

position:1537732:1
position: 1537732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1537798:1
position: 1537798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1538499-1538574:1:exon

position:1538499:1
position: 1538499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1538574:1
position: 1538574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1539690-1539803:1:exon

position:1539690:1
position: 1539690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1539803:1
position: 1539803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1544107-1544256:1:exon

position:1544107:1
position: 1544107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1544256:1
position: 1544256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1545219-1545356:1:exon

position:1545219:1
position: 1545219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545356:1
position: 1545356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1548284-1548457:1:exon

position:1548284:1
position: 1548284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1548457:1
position: 1548457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1554051-1554211:1:exon

position:1554051:1
position: 1554051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1554211:1
position: 1554211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1555255-1555392:1:exon

position:1555255:1
position: 1555255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1555392:1
position: 1555392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1556675-1556770:1:exon

position:1556675:1
position: 1556675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1556770:1
position: 1556770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1558202-1558385:1:exon

position:1558202:1
position: 1558202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1558385:1
position: 1558385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1558597-1558756:1:exon

position:1558597:1
position: 1558597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1558756:1
position: 1558756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1560307-1560431:1:exon

position:1560307:1
position: 1560307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1560431:1
position: 1560431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1563628-1563759:1:exon

position:1563628:1
position: 1563628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1563759:1
position: 1563759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1565432-1565518:1:exon

position:1565432:1
position: 1565432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565518:1
position: 1565518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1566807-1566971:1:exon

position:1566807:1
position: 1566807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1566971:1
position: 1566971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1567541-1567587:1:exon

position:1567541:1
position: 1567541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1567587:1
position: 1567587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1567731-1567809:1:exon

position:1567731:1
position: 1567731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1567809:1
position: 1567809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1572769-1572906:1:exon

position:1572769:1
position: 1572769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1572906:1
position: 1572906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1573295-1573490:1:exon

position:1573295:1
position: 1573295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1573490:1
position: 1573490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1575475-1575542:1:exon

position:1575475:1
position: 1575475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1575542:1
position: 1575542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1576358-1576545:1:exon

position:1576358:1
position: 1576358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1576545:1
position: 1576545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1577716-1577815:1:exon

position:1577716:1
position: 1577716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577815:1
position: 1577815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1581061-1581231:1:exon

position:1581061:1
position: 1581061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581231:1
position: 1581231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1581476-1581556:1:exon

position:1581476:1
position: 1581476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581556:1
position: 1581556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1583692-1583772:1:exon

position:1583692:1
position: 1583692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1583772:1
position: 1583772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1584720-1584815:1:exon

position:1584720:1
position: 1584720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584815:1
position: 1584815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1585360-1585482:1:exon

position:1585360:1
position: 1585360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585482:1
position: 1585482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1595701-1595864:1:exon

position:1595701:1
position: 1595701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1595864:1
position: 1595864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1596414-1596858:1:exon

position:1596414:1
position: 1596414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596858:1
position: 1596858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1598337-1598436:1:exon

position:1598337:1
position: 1598337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1598436:1
position: 1598436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1601069-1601201:1:exon

position:1601069:1
position: 1601069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1601201:1
position: 1601201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1602546-1602908:1:exon

position:1602546:1
position: 1602546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein mono-ADP-ribosyltransferase PARP4
translation: MTLGIFANCTFCLKVKYLPRQQKRKLQFDIKENGGKFSLLLNPQCTHIVLDNADLLSQYQLDSIRKKHVHIASPDFIWECIKERRLLDVKNYEPTQALAITLPPDQNTSSSEVKTDDLSLDDVMSQEDIVEPTEFHVENVEIAHFPQDFEVAKYNTLEKVGISGDPEVVVVELCCSQAPEDPPFLICAHFLLADGAQTRRQFAVKKTSADASEYYENYIEELKKQGFLLREHFTPQATQLASEKLQALLLEEVIGAGPLSPEVSDLVELLWTEALGHLEHTLLKPVNSISLNDVSKAEGILLLAKSALKNGETAEQLRKVVAEFYRLIPHKAPGPKEVNLKLLAKEEDLCQLIRDMVNVCETNFSKPNPPSLAKYRALRCKIEHVEQHTEEFLSVKKEILKNNHGKHRVNILQMFRVGRVNETTEFLSKLGNVRLLLHGSPVCNLIGILSRGLLLPKVVEDRGVHRTDIGNLGSGIYFSDSLSATIKYAHPGETEGTRFLLVCDVALGECIEFNQKDFSLTEAPEGYHSVHGVARTASLNTDFEDDEFVVYKTNQVKMKYIIKFCLPEDQIKSFRPPNNIELEQYRPPVFSDSSKIEDYQLPDTKASSSTQAGLQDISGNLIPLENVHVKGRIIDFVAQVVLFQTYTNQSHVPIEAKYIFPLDDKAAVCGFEAFINGKHIVGEIKEKEEAQREYREAISQGHGAYLMDQDAPDVFTVSVGNLPPAAKVLIKITYITELTLQGPVAVFFMPATVAPWQQDKALNENLQDTVEKICVKEIGTQQSFSLTMSIEMPYVIKFISSDTHELKQKSTDCKAVVSTVEGSSLQSDGFSLHVGLCDPYLPRMWVEKHPEKESEACMLVFQPCLTATLPDVADGNEVIICLDCSNSMEGVTFTNARKIALHALSLLGKKQKVNIVQFGTGYKELFSYPKNITSQKVLTEFILSATPTMGNTDFWKTLRYLSLLYPAQGLRNILLISDGHLQNESLTLQLVQRSVHHTRLFTCGIGATANRHILRTLSQYGAGVFEYFNSNSKHSWKKQIEEQMARLHSPSCHSVSVKWQQLNLDAPEPLQAPAQVPSLFHNDRLLVYGFIPHCTQATLCALIEEKEFQAMVSTTELQKTTGTMIHKLTARALIRDYEDGILHENETHHEMKKQTLKSVIIQLSKENSLITQFTSFVAVEKRDGDEAAFPNIPNISTLIAEEDVDFLPYMSWQEKQPSPRATQHLPSASPAGDAVQVEHSALFDFGAYELEEELLTFDECEDAEMPLDLRDMSFSPEGFSNTGRSIASESHDSMANESLSSSGFFEKQSLRHTLDNAPARDVRIGSALRVKRHAALQVKRRLALNFEGSVEVDSFHPSDQLPNVMLMQLDTAVKDSQMSMAPYSATKRSKKKIQVLEAGGGGQAVASHQSWMSAVTCRKLFSLQTQDGFWTLTPELGFILNVNVNALCSFLEQKGIGSLGVSGRESLLNLIATLLVLQFLRTKLEQEGIVVKSWMTLDASSVSREIPLQYTEKIKKANEWVKRMEGQYSSICQRLELGKDWDSATKQLLGIEPGDPASPLHRALSQSQG
SIO_010081: PARP4
subclass of: SO_0000673
so part of: PARP4
location: join(1532586..1532717,1534721..1534922,1537732..1537798,1538499..1538574,1539690..1539803,1544107..1544256,1545219..1545356,1548284..1548457,1554051..1554211,1555255..1555392,1556675..1556770,1558202..1558385,1558597..1558756,1560307..1560431,1563628..1563759,1565432..1565518,1566807..1566971,1567541..1567587,1567731..1567809,1572769..1572906,1573295..1573490,1575475..1575542,1576358..1576545,1577716..1577815,1581061..1581231,1581476..1581556,1583692..1583772,1584720..1584815,1585360..1585482,1595701..1595864,1596414..1596858,1598337..1598436,1601069..1601201,1602546..1602744)
location: region:1532586-1602744:1
so has part: feature:1532586-1532717:1:exon
so has part: feature:1534721-1534922:1:exon
so has part: feature:1537732-1537798:1:exon
so has part: feature:1538499-1538574:1:exon
so has part: feature:1539690-1539803:1:exon
so has part: feature:1544107-1544256:1:exon
so has part: feature:1545219-1545356:1:exon
so has part: feature:1548284-1548457:1:exon
so has part: feature:1554051-1554211:1:exon
so has part: feature:1555255-1555392:1:exon
so has part: feature:1556675-1556770:1:exon
so has part: feature:1558202-1558385:1:exon
so has part: feature:1558597-1558756:1:exon
so has part: feature:1560307-1560431:1:exon
so has part: feature:1563628-1563759:1:exon
so has part: feature:1565432-1565518:1:exon
so has part: feature:1566807-1566971:1:exon
so has part: feature:1567541-1567587:1:exon
so has part: feature:1567731-1567809:1:exon
so has part: feature:1572769-1572906:1:exon
so has part: feature:1573295-1573490:1:exon
so has part: feature:1575475-1575542:1:exon
so has part: feature:1576358-1576545:1:exon
so has part: feature:1577716-1577815:1:exon
so has part: feature:1581061-1581231:1:exon
so has part: feature:1581476-1581556:1:exon
so has part: feature:1583692-1583772:1:exon
so has part: feature:1584720-1584815:1:exon
so has part: feature:1585360-1585482:1:exon
so has part: feature:1595701-1595864:1:exon
so has part: feature:1596414-1596858:1:exon
so has part: feature:1598337-1598436:1:exon
so has part: feature:1601069-1601201:1:exon
so has part: feature:1602546-1602744:1:exon

XP_012782226.1
type: Protein
SIO_000068: ncbiprotein

position:1602744:1
position: 1602744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1532586-1532717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1534721-1534922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1537732-1537798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1538499-1538574:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1539690-1539803:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1544107-1544256:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1545219-1545356:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1548284-1548457:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1554051-1554211:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1555255-1555392:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1556675-1556770:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1558202-1558385:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1558597-1558756:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1560307-1560431:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1563628-1563759:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1565432-1565518:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1566807-1566971:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1567541-1567587:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1567731-1567809:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1572769-1572906:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1573295-1573490:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1575475-1575542:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1576358-1576545:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1577716-1577815:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1581061-1581231:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1581476-1581556:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1583692-1583772:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1584720-1584815:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1585360-1585482:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1595701-1595864:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1596414-1596858:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1598337-1598436:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1601069-1601201:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1602546-1602744:1:exon

MPHOSPH8
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: MPHOSPH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1618242..1660866
location: region:1618242-1660866:1
so has part: feature:1618242-1660866:1:exon
subclass of: SO_0000010

101518676
type: Gene
SIO_000068: ncbigene

position:1618242:1
position: 1618242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1660866:1
position: 1660866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1618242-1660866:1:exon

MPHOSPH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MPHOSPH8
product: M-phase phosphoprotein 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012926771.1
SIO_010081: MPHOSPH8
subclass of: SO_0000673
so part of: MPHOSPH8
location: join(1618242..1618406,1640004..1640159,1642703..1643503,1645737..1645836,1647912..1648166,1650549..1650668,1650751..1650839,1652284..1652424,1652855..1652941,1654210..1654364,1655720..1655874,1659593..1659720,1660202..1660285,1660617..1660866)
location: region:1618242-1660866:1
so has part: feature:1618242-1618406:1:exon
so has part: feature:1640004-1640159:1:exon
so has part: feature:1642703-1643503:1:exon
so has part: feature:1645737-1645836:1:exon
so has part: feature:1647912-1648166:1:exon
so has part: feature:1650549-1650668:1:exon
so has part: feature:1650751-1650839:1:exon
so has part: feature:1652284-1652424:1:exon
so has part: feature:1652855-1652941:1:exon
so has part: feature:1654210-1654364:1:exon
so has part: feature:1655720-1655874:1:exon
so has part: feature:1659593-1659720:1:exon
so has part: feature:1660202-1660285:1:exon
so has part: feature:1660617-1660866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1618242-1618406:1:exon

position:1618406:1
position: 1618406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1640004-1640159:1:exon

position:1640004:1
position: 1640004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640159:1
position: 1640159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1642703-1643503:1:exon

position:1642703:1
position: 1642703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1643503:1
position: 1643503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1645737-1645836:1:exon

position:1645737:1
position: 1645737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1645836:1
position: 1645836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1647912-1648166:1:exon

position:1647912:1
position: 1647912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648166:1
position: 1648166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1650549-1650668:1:exon

position:1650549:1
position: 1650549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1650668:1
position: 1650668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1650751-1650839:1:exon

position:1650751:1
position: 1650751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1650839:1
position: 1650839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1652284-1652424:1:exon

position:1652284:1
position: 1652284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1652424:1
position: 1652424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1652855-1652941:1:exon

position:1652855:1
position: 1652855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1652941:1
position: 1652941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1654210-1654364:1:exon

position:1654210:1
position: 1654210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1654364:1
position: 1654364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1655720-1655874:1:exon

position:1655720:1
position: 1655720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1655874:1
position: 1655874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1659593-1659720:1:exon

position:1659593:1
position: 1659593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1659720:1
position: 1659720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1660202-1660285:1:exon

position:1660202:1
position: 1660202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1660285:1
position: 1660285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1660617-1660866:1:exon

position:1660617:1
position: 1660617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MPHOSPH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MPHOSPH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: M-phase phosphoprotein 8
translation: MVLCSASKADLLHLSSPLWLATQLDSLGIEPDPNSDVCKVQEIDHSKPQPGLVYVGRVLYKVRWKGYASEDDTWEPEVHLVDCKEVLLEFRRKNTENKARAVRKDIQRLSLNKDIFEANSDSDQQSETQEETYPSKKKKPRPREEKNLEDVRKKKAKTGKGKEQPSADPESSPERLVIDLRAKKRILEGKEELKDSKKPKKDELKELKKAKKGELKDLKTKVREDPKENRKARKEKSADSPFESELSVLREPPSHEESQEELHPDNRDEKEPRGAQDPAEQGAEQEGASEKEGDGALSAGEDAERKGKRESGKPENKGVGSEKKAVPKKQKQGSQDKGRGTAELDRLTPMGAQTQPSWPTVAESGLRASESVEQEKESKKKEPKEKYQKRYDSDKEEKTRRDLKGLKTLKEIKNAIDLLKKTSEEKNDVPEDNRKKETAADCKTTAEQPSEESRQTVKDRRAAREESDTWAHIAAEGDQELLDSGLHPDENPDGRHQSLGMDLQLEWMKLDDFQKHLDGEDESFTLADAISSNLLRDAVKNGDYITVKVALNSSEEYDLDQEDPSGMTLVMLAAAGGQDDLLRLLITKGAEVNRQQKNGTTALIHAAEKNFLTTVAILLEAGAFVNVQQSNGETALMKACKRGNSDIVRLVIECGADCNILSKHQNSAMHFAKQSNNVLVYDLLKSHLETLSRVAEETIRDYFEARLALLEPVFPIACHRLCEGPDFSTDFHYKPPQNIPEGSGVLLFIFHANFLGKEVIARLCGPCCVQAVVLNDKFQLPVFLDSHFVYSFSPVAGPNKLFLRLTEAPSAKVKLLIGAYRVQLQ
SIO_010081: MPHOSPH8
subclass of: SO_0000673
so part of: MPHOSPH8
location: join(1618242..1618406,1640004..1640159,1642703..1643503,1645737..1645836,1647912..1648166,1650549..1650668,1650751..1650839,1652284..1652424,1652855..1652941,1654210..1654364,1655720..1655874,1659593..1659720,1660202..1660285,1660617..1660658)
location: region:1618242-1660658:1
so has part: feature:1618242-1618406:1:exon
so has part: feature:1640004-1640159:1:exon
so has part: feature:1642703-1643503:1:exon
so has part: feature:1645737-1645836:1:exon
so has part: feature:1647912-1648166:1:exon
so has part: feature:1650549-1650668:1:exon
so has part: feature:1650751-1650839:1:exon
so has part: feature:1652284-1652424:1:exon
so has part: feature:1652855-1652941:1:exon
so has part: feature:1654210-1654364:1:exon
so has part: feature:1655720-1655874:1:exon
so has part: feature:1659593-1659720:1:exon
so has part: feature:1660202-1660285:1:exon
so has part: feature:1660617-1660658:1:exon

XP_012782225.1
type: Protein
SIO_000068: ncbiprotein

position:1660658:1
position: 1660658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1618242-1618406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1640004-1640159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1642703-1643503:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1645737-1645836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647912-1648166:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1650549-1650668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1650751-1650839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1652284-1652424:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1652855-1652941:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1654210-1654364:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1655720-1655874:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1659593-1659720:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1660202-1660285:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1660617-1660658:1:exon

PSPC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1654399..1754078)
location: region:1654399-1754078:-1
so has part: feature:1654399-1754078:-1:exon
subclass of: SO_0000010

101521768
type: Gene
SIO_000068: ncbigene

position:1654399:-1
position: 1654399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1754078:-1
position: 1754078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1654399-1754078:-1:exon

PSPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PSPC1
product: paraspeckle component 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493485.1
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(1654399..1655323,1665239..1665338,1692931..1693100,1714932..1714989,1731015..1731120,1731610..1731694,1736603..1736799,1738548..1738643,1746899..1747200,1753574..1753939))
location: region:1654399-1753939:-1
so has part: feature:1753574-1753939:-1:exon
so has part: feature:1746899-1747200:-1:exon
so has part: feature:1738548-1738643:-1:exon
so has part: feature:1736603-1736799:-1:exon
so has part: feature:1731610-1731694:-1:exon
so has part: feature:1731015-1731120:-1:exon
so has part: feature:1714932-1714989:-1:exon
so has part: feature:1692931-1693100:-1:exon
so has part: feature:1665239-1665338:-1:exon
so has part: feature:1654399-1655323:-1:exon

position:1753939:-1
position: 1753939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1753574-1753939:-1:exon

position:1753574:-1
position: 1753574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1746899-1747200:-1:exon

position:1746899:-1
position: 1746899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747200:-1
position: 1747200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1738548-1738643:-1:exon

position:1738548:-1
position: 1738548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738643:-1
position: 1738643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1736603-1736799:-1:exon

position:1736603:-1
position: 1736603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1736799:-1
position: 1736799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1731610-1731694:-1:exon

position:1731610:-1
position: 1731610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1731694:-1
position: 1731694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1731015-1731120:-1:exon

position:1731015:-1
position: 1731015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1731120:-1
position: 1731120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1714932-1714989:-1:exon

position:1714932:-1
position: 1714932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714989:-1
position: 1714989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1692931-1693100:-1:exon

position:1692931:-1
position: 1692931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693100:-1
position: 1693100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1665239-1665338:-1:exon

position:1665239:-1
position: 1665239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1665338:-1
position: 1665338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1654399-1655323:-1:exon

position:1655323:-1
position: 1655323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paraspeckle component 1 isoform X2
translation: MMLRGNLKQVRIEKNPARLRALESAAGETEPAAAMALSLAGEPASASAAAADDHPEEEVGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRREEEMIRHREQEELRRQQEGFKPNYMENREQEMRMGDMGPRGAINMGDAFSPAPAGNQGPPPMMGMNMNNRGTIPGPPMGPGPAMGPEGATNMGTPMMPDNGAVGNARKQG
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(1665315..1665338,1692931..1693100,1714932..1714989,1731015..1731120,1731610..1731694,1736603..1736799,1738548..1738643,1746899..1747200,1753574..1753939))
location: region:1665315-1753939:-1
so has part: feature:1753574-1753939:-1:exon
so has part: feature:1746899-1747200:-1:exon
so has part: feature:1738548-1738643:-1:exon
so has part: feature:1736603-1736799:-1:exon
so has part: feature:1731610-1731694:-1:exon
so has part: feature:1731015-1731120:-1:exon
so has part: feature:1714932-1714989:-1:exon
so has part: feature:1692931-1693100:-1:exon
so has part: feature:1665315-1665338:-1:exon

XP_036349378.1
type: Protein
SIO_000068: ncbiprotein

position:1665315:-1
position: 1665315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1753574-1753939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1746899-1747200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1738548-1738643:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1736603-1736799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1731610-1731694:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1731015-1731120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1714932-1714989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1692931-1693100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665315-1665338:-1:exon

PSPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PSPC1
product: paraspeckle component 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 11 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577596.3
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(1690604..1691100,1692931..1693100,1714932..1714989,1731015..1731120,1731610..1731694,1736603..1736799,1738548..1738643,1746899..1747200,1753574..1753973,1754056..1754078))
location: region:1690604-1754078:-1
so has part: feature:1754056-1754078:-1:exon
so has part: feature:1753574-1753973:-1:exon
so has part: feature:1746899-1747200:-1:exon
so has part: feature:1738548-1738643:-1:exon
so has part: feature:1736603-1736799:-1:exon
so has part: feature:1731610-1731694:-1:exon
so has part: feature:1731015-1731120:-1:exon
so has part: feature:1714932-1714989:-1:exon
so has part: feature:1692931-1693100:-1:exon
so has part: feature:1690604-1691100:-1:exon

position:1690604:-1
position: 1690604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1754056-1754078:-1:exon

position:1754056:-1
position: 1754056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1753574-1753973:-1:exon

position:1753973:-1
position: 1753973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1746899-1747200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1738548-1738643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1736603-1736799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1731610-1731694:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1731015-1731120:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1714932-1714989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1692931-1693100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1690604-1691100:-1:exon

position:1691100:-1
position: 1691100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paraspeckle component 1 isoform X1
translation: MMLRGNLKQVRIEKNPARLRALESAAGETEPAAAMALSLAGEPASASAAAADDHPEEEVGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRREEEMIRHREQEELRRQQEGFKPNYMENREQEMRMGDMGPRGAINMGDAFSPAPAGNQGPPPMMGMNMNNRGTIPGPPMGPGPAMGPEGATNMGTPMMPDNGAVHNDRFPQGPPSQMGSPMGSRTGSETPQAPLSGVGPVSGGPGGFGRGSQGANFEGPNKRRRY
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(1690915..1691100,1692931..1693100,1714932..1714989,1731015..1731120,1731610..1731694,1736603..1736799,1738548..1738643,1746899..1747200,1753574..1753939))
location: region:1690915-1753939:-1
so has part: feature:1753574-1753939:-1:exon
so has part: feature:1746899-1747200:-1:exon
so has part: feature:1738548-1738643:-1:exon
so has part: feature:1736603-1736799:-1:exon
so has part: feature:1731610-1731694:-1:exon
so has part: feature:1731015-1731120:-1:exon
so has part: feature:1714932-1714989:-1:exon
so has part: feature:1692931-1693100:-1:exon
so has part: feature:1690915-1691100:-1:exon

XP_004577653.1
type: Protein
SIO_000068: ncbiprotein

position:1690915:-1
position: 1690915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1753574-1753939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1746899-1747200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1738548-1738643:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1736603-1736799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1731610-1731694:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1731015-1731120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1714932-1714989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1692931-1693100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1690915-1691100:-1:exon

ZMYM5
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ZMYM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1773127..1804900)
location: region:1773127-1804900:-1
so has part: feature:1773127-1804900:-1:exon
subclass of: SO_0000010

101518436
type: Gene
SIO_000068: ncbigene

position:1773127:-1
position: 1773127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1804900:-1
position: 1804900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1773127-1804900:-1:exon

ZMYM5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ZMYM5
product: zinc finger MYM-type containing 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577715.2
SIO_010081: ZMYM5
subclass of: SO_0000673
so part of: ZMYM5
location: complement(join(1773127..1774656,1789738..1789950,1791582..1791747,1792255..1792537,1804153..1804246,1804487..1804900))
location: region:1773127-1804900:-1
so has part: feature:1804487-1804900:-1:exon
so has part: feature:1804153-1804246:-1:exon
so has part: feature:1792255-1792537:-1:exon
so has part: feature:1791582-1791747:-1:exon
so has part: feature:1789738-1789950:-1:exon
so has part: feature:1773127-1774656:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1804487-1804900:-1:exon

position:1804487:-1
position: 1804487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1804153-1804246:-1:exon

position:1804153:-1
position: 1804153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1804246:-1
position: 1804246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1792255-1792537:-1:exon

position:1792255:-1
position: 1792255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1792537:-1
position: 1792537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1791582-1791747:-1:exon

position:1791582:-1
position: 1791582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1791747:-1
position: 1791747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1789738-1789950:-1:exon

position:1789738:-1
position: 1789738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1789950:-1
position: 1789950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1773127-1774656:-1:exon

position:1774656:-1
position: 1774656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZMYM5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ZMYM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 5
translation: MASRLLDVGNSFGDSANSLISRCSSVEDEDDDVVFVESVQPPSISAAAVADERDFIFTSSKNENPQENYSINVPSSRNFASVKRNICETIVIDDEEDLLETAGGKEKQSCNFIEWGIPGAKNRTQDSDFSTSRLSRSKTKTGVGPFNPGRVNVAGDVFQNGESASHHNPDSWISQSASFPCNQKQPGLDSLSPLALLPKQNFLPSAQQLNTPAKIICANCKIALQKGQTAYQRKGSAHLFCSTTCLSSFSHKPCRKTRKVMCKKNGPTTNAAIVIPVESSQCFGEFSGPSSSSPYEDGQDPRKGAFNKSRCTICSKLTEIRHEVSVNNITHKLCSNDCFNKYRLANGLLMNCCEQCGEYLPRKASGTSILSIQDQQKRFCSQSCVNEYQQMMETKLKLFSASENRKRNAVRDEEEEGNSYGSSNMLMVESEEIIAEKREKTCEPQASVASSTGPFLITPNVTPSSLLTNLDRIQEQLEEERLEDSVTAGLLCADPGTWPRILSVKQRDTLVENDLPQVRNFNFPKDNTGRRFSENYYTRILPNGERTTRSWLLYSTSKDSVFCLHCKLFGEGKNRLRNEHGCKDWQHLSHILSKHEESEVHINNSVKYSQLKSDLKKGKPVAAREPSLCGDETDDSVLLVYM
SIO_010081: ZMYM5
subclass of: SO_0000673
so part of: ZMYM5
location: complement(join(1773898..1774656,1789738..1789950,1791582..1791747,1792255..1792537,1804153..1804246,1804487..1804900))
location: region:1773898-1804900:-1
so has part: feature:1804487-1804900:-1:exon
so has part: feature:1804153-1804246:-1:exon
so has part: feature:1792255-1792537:-1:exon
so has part: feature:1791582-1791747:-1:exon
so has part: feature:1789738-1789950:-1:exon
so has part: feature:1773898-1774656:-1:exon

XP_004577772.1
type: Protein
SIO_000068: ncbiprotein

position:1773898:-1
position: 1773898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1804487-1804900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1804153-1804246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1792255-1792537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1791582-1791747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1789738-1789950:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1773898-1774656:-1:exon

ZMYM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1923689..2061866
location: region:1923689-2061866:1
so has part: feature:1923689-2061866:1:exon
subclass of: SO_0000010

101521525
type: Gene
SIO_000068: ncbigene

position:1923689:1
position: 1923689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2061866:1
position: 2061866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1923689-2061866:1:exon

ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 mRNAs, 13 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493466.1
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(1923689..1924310,1950973..1951041,1988232..1989088,1993931..1994216,1995785..1995950,2002634..2002846,2009559..2009630,2018389..2018539,2019754..2019869,2023139..2023255,2024612..2024762,2026959..2027131,2033792..2033957,2034534..2034568,2037093..2037222,2037845..2037960,2038676..2038847,2040787..2040912,2042928..2043022,2045217..2045385,2045532..2045683,2057365..2057479,2058120..2058371,2058660..2058780,2061017..2061866)
location: region:1923689-2061866:1
so has part: feature:1923689-1924310:1:exon
so has part: feature:1950973-1951041:1:exon
so has part: feature:1988232-1989088:1:exon
so has part: feature:1993931-1994216:1:exon
so has part: feature:1995785-1995950:1:exon
so has part: feature:2002634-2002846:1:exon
so has part: feature:2009559-2009630:1:exon
so has part: feature:2018389-2018539:1:exon
so has part: feature:2019754-2019869:1:exon
so has part: feature:2023139-2023255:1:exon
so has part: feature:2024612-2024762:1:exon
so has part: feature:2026959-2027131:1:exon
so has part: feature:2033792-2033957:1:exon
so has part: feature:2034534-2034568:1:exon
so has part: feature:2037093-2037222:1:exon
so has part: feature:2037845-2037960:1:exon
so has part: feature:2038676-2038847:1:exon
so has part: feature:2040787-2040912:1:exon
so has part: feature:2042928-2043022:1:exon
so has part: feature:2045217-2045385:1:exon
so has part: feature:2045532-2045683:1:exon
so has part: feature:2057365-2057479:1:exon
so has part: feature:2058120-2058371:1:exon
so has part: feature:2058660-2058780:1:exon
so has part: feature:2061017-2061866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1923689-1924310:1:exon

position:1924310:1
position: 1924310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1950973-1951041:1:exon

position:1950973:1
position: 1950973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1951041:1
position: 1951041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1988232-1989088:1:exon

position:1988232:1
position: 1988232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1989088:1
position: 1989088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1993931-1994216:1:exon

position:1993931:1
position: 1993931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1994216:1
position: 1994216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1995785-1995950:1:exon

position:1995785:1
position: 1995785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1995950:1
position: 1995950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2002634-2002846:1:exon

position:2002634:1
position: 2002634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2002846:1
position: 2002846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2009559-2009630:1:exon

position:2009559:1
position: 2009559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2009630:1
position: 2009630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2018389-2018539:1:exon

position:2018389:1
position: 2018389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2018539:1
position: 2018539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2019754-2019869:1:exon

position:2019754:1
position: 2019754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2019869:1
position: 2019869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2023139-2023255:1:exon

position:2023139:1
position: 2023139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2023255:1
position: 2023255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2024612-2024762:1:exon

position:2024612:1
position: 2024612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024762:1
position: 2024762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2026959-2027131:1:exon

position:2026959:1
position: 2026959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2027131:1
position: 2027131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2033792-2033957:1:exon

position:2033792:1
position: 2033792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2033957:1
position: 2033957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2034534-2034568:1:exon

position:2034534:1
position: 2034534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2034568:1
position: 2034568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2037093-2037222:1:exon

position:2037093:1
position: 2037093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2037222:1
position: 2037222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2037845-2037960:1:exon

position:2037845:1
position: 2037845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2037960:1
position: 2037960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2038676-2038847:1:exon

position:2038676:1
position: 2038676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2038847:1
position: 2038847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2040787-2040912:1:exon

position:2040787:1
position: 2040787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2040912:1
position: 2040912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2042928-2043022:1:exon

position:2042928:1
position: 2042928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2043022:1
position: 2043022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2045217-2045385:1:exon

position:2045217:1
position: 2045217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2045385:1
position: 2045385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2045532-2045683:1:exon

position:2045532:1
position: 2045532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2045683:1
position: 2045683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2057365-2057479:1:exon

position:2057365:1
position: 2057365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2057479:1
position: 2057479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2058120-2058371:1:exon

position:2058120:1
position: 2058120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2058371:1
position: 2058371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2058660-2058780:1:exon

position:2058660:1
position: 2058660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2058780:1
position: 2058780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2061017-2061866:1:exon

position:2061017:1
position: 2061017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 5 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493467.1
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(1950965..1951041,1988232..1988733,1988995..1989088,1993931..1994216,1995785..1995950,2002634..2002846,2009559..2009630,2018389..2018539,2019754..2019869,2023139..2023255,2024612..2024762,2026959..2027131,2033792..2033957,2034534..2034568,2037093..2037222,2037845..2037960,2038676..2038847,2040787..2040912,2042928..2043022,2045217..2045385,2045532..2045683,2057365..2057479,2058120..2058371,2058660..2058780,2061017..2061866)
location: region:1950965-2061866:1
so has part: feature:1950965-1951041:1:exon
so has part: feature:1988232-1988733:1:exon
so has part: feature:1988995-1989088:1:exon
so has part: feature:1993931-1994216:1:exon
so has part: feature:1995785-1995950:1:exon
so has part: feature:2002634-2002846:1:exon
so has part: feature:2009559-2009630:1:exon
so has part: feature:2018389-2018539:1:exon
so has part: feature:2019754-2019869:1:exon
so has part: feature:2023139-2023255:1:exon
so has part: feature:2024612-2024762:1:exon
so has part: feature:2026959-2027131:1:exon
so has part: feature:2033792-2033957:1:exon
so has part: feature:2034534-2034568:1:exon
so has part: feature:2037093-2037222:1:exon
so has part: feature:2037845-2037960:1:exon
so has part: feature:2038676-2038847:1:exon
so has part: feature:2040787-2040912:1:exon
so has part: feature:2042928-2043022:1:exon
so has part: feature:2045217-2045385:1:exon
so has part: feature:2045532-2045683:1:exon
so has part: feature:2057365-2057479:1:exon
so has part: feature:2058120-2058371:1:exon
so has part: feature:2058660-2058780:1:exon
so has part: feature:2061017-2061866:1:exon

position:1950965:1
position: 1950965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1950965-1951041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1988232-1988733:1:exon

position:1988733:1
position: 1988733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1988995-1989088:1:exon

position:1988995:1
position: 1988995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1993931-1994216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1995785-1995950:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2002634-2002846:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2009559-2009630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2018389-2018539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2019754-2019869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2023139-2023255:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2024612-2024762:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2026959-2027131:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2033792-2033957:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2034534-2034568:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2037093-2037222:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2037845-2037960:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2038676-2038847:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2040787-2040912:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2042928-2043022:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2045217-2045385:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2045532-2045683:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2057365-2057479:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2058120-2058371:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2058660-2058780:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2061017-2061866:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X1
translation: MDTSSLGGLELTDQTPVLLGNLAMATSLTNVGNSFSGPPNPLVSRSSKFQNSSVEDDDDVVFIEPVQPPPPSAPVVADQRTAAFTSSKNEEHQGNDSKILPSSKELASQKGSVSETIVIDDEEDMETNQGQEKNPSNFVERRPSETKNRTNDVDFSPSSFSRSKVNAGMGNSGITTEPDSEIQIANVTTLETGVSSVNDGQLENTDSRDMNLMITHVTSLQNTNLGDVSNGLQSSNFGVNIQTYTPSLTSQTKTGVGPFNPGRMNVAGDVFQNGESASHHNPDSWISQSASFPRNQKQPGVDSLSPVASLPKQIFPSSAQQQPTKPVKVTCANCRKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQNPTKGALNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLVIDGQQKRFCCQSCVSEYKQVGSHPSFLKEVRDHMQESFLMQPEKYGKLTTCTGCRTQCRFFDMTQCIGPNGYMEPYCSTACMNSHKTKYAKSQSLGIICHFCKRNSLPQYQATMPDGKLYNFCNSNCVAKFQALSMQSSQNGQFVAPSDIQLKCNYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGATKELDGVVRDFCGEECCKKFQDWYYKAARCDCCKSQGTLKERVQWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQTSRTKMTGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQTKSCQTDDNWKTEYVPVPIPVPVYIPVPMHMYSQSIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEELKNKVSSDPLDAGLLTMTDIIAEDEGKPEAASINSVIIETDIIASDILKNSDSETQSNMPDVPYEPDLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRTKKKGTKRKAVSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVKTRQLDEDLLELDQLTSSKSVKLKEDLLSHTTAELNYGLAHFVNEIRRPNGENYAPDSIYYLCLGIQEYLCGSNRKDNIFIDPGYQTFEQELNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKKNPITMENKACLRYQVSSLCGTDAEDKITTGKRKHEDDEPVFEQIENTANPARCPVKMFECYLSKSPQNLNQRTDVFYLQPERSSSSDSPVWYTSASLDRNTLENMLVRVLLVKDIYDKDNYELDEDTD
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(1988242..1989088,1993931..1994216,1995785..1995950,2002634..2002846,2009559..2009630,2018389..2018539,2019754..2019869,2023139..2023255,2024612..2024762,2026959..2027131,2033792..2033957,2034534..2034568,2037093..2037222,2037845..2037960,2038676..2038847,2040787..2040912,2042928..2043022,2045217..2045385,2045532..2045683,2057365..2057479,2058120..2058371,2058660..2058780,2061017..2061209)
location: region:1988242-2061209:1
so has part: feature:1988242-1989088:1:exon
so has part: feature:1993931-1994216:1:exon
so has part: feature:1995785-1995950:1:exon
so has part: feature:2002634-2002846:1:exon
so has part: feature:2009559-2009630:1:exon
so has part: feature:2018389-2018539:1:exon
so has part: feature:2019754-2019869:1:exon
so has part: feature:2023139-2023255:1:exon
so has part: feature:2024612-2024762:1:exon
so has part: feature:2026959-2027131:1:exon
so has part: feature:2033792-2033957:1:exon
so has part: feature:2034534-2034568:1:exon
so has part: feature:2037093-2037222:1:exon
so has part: feature:2037845-2037960:1:exon
so has part: feature:2038676-2038847:1:exon
so has part: feature:2040787-2040912:1:exon
so has part: feature:2042928-2043022:1:exon
so has part: feature:2045217-2045385:1:exon
so has part: feature:2045532-2045683:1:exon
so has part: feature:2057365-2057479:1:exon
so has part: feature:2058120-2058371:1:exon
so has part: feature:2058660-2058780:1:exon
so has part: feature:2061017-2061209:1:exon

XP_036349359.1
type: Protein
SIO_000068: ncbiprotein

position:1988242:1
position: 1988242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2061209:1
position: 2061209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1988242-1989088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993931-1994216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1995785-1995950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2002634-2002846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2009559-2009630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2018389-2018539:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2019754-2019869:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2023139-2023255:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2024612-2024762:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2026959-2027131:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2033792-2033957:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2034534-2034568:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2037093-2037222:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2037845-2037960:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2038676-2038847:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2040787-2040912:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2042928-2043022:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2045217-2045385:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2045532-2045683:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2057365-2057479:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2058120-2058371:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2058660-2058780:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2061017-2061209:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X2
translation: MDTSSLGGLELTDQTPVLLGNLAMATSLTNVGNSFSGPPNPLVSRSSKFQNSSVEDDDDVVFIEPVQPPPPSAPVVADQRTAAFTSSKNEEHQGNDSKILPSSKELASQKGSVSETIVIDDEEDMETNQGQEKNPSNFVERRPSETKNRTNDVDFSPSSFSRSKTKTGVGPFNPGRMNVAGDVFQNGESASHHNPDSWISQSASFPRNQKQPGVDSLSPVASLPKQIFPSSAQQQPTKPVKVTCANCRKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQNPTKGALNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLVIDGQQKRFCCQSCVSEYKQVGSHPSFLKEVRDHMQESFLMQPEKYGKLTTCTGCRTQCRFFDMTQCIGPNGYMEPYCSTACMNSHKTKYAKSQSLGIICHFCKRNSLPQYQATMPDGKLYNFCNSNCVAKFQALSMQSSQNGQFVAPSDIQLKCNYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGATKELDGVVRDFCGEECCKKFQDWYYKAARCDCCKSQGTLKERVQWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQTSRTKMTGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQTKSCQTDDNWKTEYVPVPIPVPVYIPVPMHMYSQSIPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEELKNKVSSDPLDAGLLTMTDIIAEDEGKPEAASINSVIIETDIIASDILKNSDSETQSNMPDVPYEPDLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRTKKKGTKRKAVSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVKTRQLDEDLLELDQLTSSKSVKLKEDLLSHTTAELNYGLAHFVNEIRRPNGENYAPDSIYYLCLGIQEYLCGSNRKDNIFIDPGYQTFEQELNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKKNPITMENKACLRYQVSSLCGTDAEDKITTGKRKHEDDEPVFEQIENTANPARCPVKMFECYLSKSPQNLNQRTDVFYLQPERSSSSDSPVWYTSASLDRNTLENMLVRVLLVKDIYDKDNYELDEDTD
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(1988242..1988733,1988995..1989088,1993931..1994216,1995785..1995950,2002634..2002846,2009559..2009630,2018389..2018539,2019754..2019869,2023139..2023255,2024612..2024762,2026959..2027131,2033792..2033957,2034534..2034568,2037093..2037222,2037845..2037960,2038676..2038847,2040787..2040912,2042928..2043022,2045217..2045385,2045532..2045683,2057365..2057479,2058120..2058371,2058660..2058780,2061017..2061209)
location: region:1988242-2061209:1
so has part: feature:1988242-1988733:1:exon
so has part: feature:1988995-1989088:1:exon
so has part: feature:1993931-1994216:1:exon
so has part: feature:1995785-1995950:1:exon
so has part: feature:2002634-2002846:1:exon
so has part: feature:2009559-2009630:1:exon
so has part: feature:2018389-2018539:1:exon
so has part: feature:2019754-2019869:1:exon
so has part: feature:2023139-2023255:1:exon
so has part: feature:2024612-2024762:1:exon
so has part: feature:2026959-2027131:1:exon
so has part: feature:2033792-2033957:1:exon
so has part: feature:2034534-2034568:1:exon
so has part: feature:2037093-2037222:1:exon
so has part: feature:2037845-2037960:1:exon
so has part: feature:2038676-2038847:1:exon
so has part: feature:2040787-2040912:1:exon
so has part: feature:2042928-2043022:1:exon
so has part: feature:2045217-2045385:1:exon
so has part: feature:2045532-2045683:1:exon
so has part: feature:2057365-2057479:1:exon
so has part: feature:2058120-2058371:1:exon
so has part: feature:2058660-2058780:1:exon
so has part: feature:2061017-2061209:1:exon

XP_036349360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1988242-1988733:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1988995-1989088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993931-1994216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1995785-1995950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2002634-2002846:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2009559-2009630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2018389-2018539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2019754-2019869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2023139-2023255:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2024612-2024762:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2026959-2027131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2033792-2033957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2034534-2034568:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2037093-2037222:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2037845-2037960:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2038676-2038847:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2040787-2040912:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2042928-2043022:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2045217-2045385:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2045532-2045683:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2057365-2057479:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2058120-2058371:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2058660-2058780:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2061017-2061209:1:exon

GJA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: GJA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2103469..2104710)
location: region:2103469-2104710:-1
so has part: feature:2103469-2104710:-1:exon
subclass of: SO_0000010

101518191
type: Gene
SIO_000068: ncbigene

position:2103469:-1
position: 2103469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2104710:-1
position: 2104710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2103469-2104710:-1:exon

GJA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GJA3
product: gap junction protein alpha 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins
transcript id: XM_004577714.1
SIO_010081: GJA3
subclass of: SO_0000673
so part of: GJA3
location: complement(2103469..2104710)
location: region:2103469-2104710:-1
so has part: feature:2103469-2104710:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2103469-2104710:-1:exon

GJA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GJA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction alpha-3 protein
translation: MGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEEVWGDEQSDFTCNTQQPGCENVCYDRAFPISHIRFWALQIIFVSTPTLIYLGHVLHIVRMEEKKKEREEELLRRNHGGHGESLDTTGAQDLPAAPVRDGKVRIAGALLRTYVFNIIFKTLFEVGFIAGQYFLYGFKLQPLYRCDRWPCPNTVDCFISRPTEKTIFIIFMLAVACASLLLNMLEIYHLGWKKLKQGVTNHYGADPCEALAARPGPPAVTIGFPPSYAHAAAALPQGPARASPPAGDSTEVALVAEPEKGRLLPTSEPNWASPAAEPQAPSRKAAPSPGGSSSASSLPPPREAGPGGSAPLLLGGDASRSSSEEGPLGATPGEEEPAVTAAAEMHAPPSLSADAGRCSKASSSGRARPSDLAI
SIO_010081: GJA3
subclass of: SO_0000673
so part of: GJA3
location: complement(2103469..2104710)
location: region:2103469-2104710:-1
so has part: feature:2103469-2104710:-1:exon

XP_004577771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2103469-2104710:-1:exon

GJB2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: GJB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2160459..2161282)
location: region:2160459-2161282:-1
so has part: feature:2160459-2161282:-1:exon
subclass of: SO_0000010

101521280
type: Gene
SIO_000068: ncbigene

position:2160459:-1
position: 2160459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2161282:-1
position: 2161282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2160459-2161282:-1:exon

GJB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GJB2
product: gap junction protein beta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 43 Proteins
transcript id: XM_004577594.3
SIO_010081: GJB2
subclass of: SO_0000673
so part of: GJB2
location: complement(2160459..2161282)
location: region:2160459-2161282:-1
so has part: feature:2160459-2161282:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2160459-2161282:-1:exon

GJB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GJB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-2 protein
translation: MDWSTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKFMKGEIKNEFKDIEEIKSQKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYIMYNGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYCSGKSKKPA
SIO_010081: GJB2
subclass of: SO_0000673
so part of: GJB2
location: complement(2160564..2161244)
location: region:2160564-2161244:-1
so has part: feature:2160564-2161244:-1:exon

XP_004577651.1
type: Protein
SIO_000068: ncbiprotein

position:2160564:-1
position: 2160564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2161244:-1
position: 2161244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2160564-2161244:-1:exon

GJB6
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: GJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2200647..2202143)
location: region:2200647-2202143:-1
so has part: feature:2200647-2202143:-1:exon
subclass of: SO_0000010

101521033
type: Gene
SIO_000068: ncbigene

position:2200647:-1
position: 2200647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2202143:-1
position: 2202143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2200647-2202143:-1:exon

GJB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GJB6
product: gap junction protein beta 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 43 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577593.2
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(2200647..2202143)
location: region:2200647-2202143:-1
so has part: feature:2200647-2202143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2200647-2202143:-1:exon

GJB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-6 protein
translation: MDWGTLHTFIGGVNKHSTSIGKVWITVLFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFQRGEKRNEFKDLEDIKKQKVRIEGSLWWTYTGSIFFRIIFEASFMYVFYFLYNGYHLPWVLKCGIEPCPNLVDCFISRPTEKTVFTVFMISASVVCMLLNVAELCYLLLKVCVRSSKRAQAHKNHPNHTLRESKENEMNELISDSGQNAITGFPS
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(2201349..2202134)
location: region:2201349-2202134:-1
so has part: feature:2201349-2202134:-1:exon

XP_004577650.1
type: Protein
SIO_000068: ncbiprotein

position:2201349:-1
position: 2201349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2202134:-1
position: 2202134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2201349-2202134:-1:exon

CRYL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CRYL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2378930..2508238)
location: region:2378930-2508238:-1
so has part: feature:2378930-2508238:-1:exon
subclass of: SO_0000010

101517946
type: Gene
SIO_000068: ncbigene

position:2378930:-1
position: 2378930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2508238:-1
position: 2508238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2378930-2508238:-1:exon

CRYL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CRYL1
product: crystallin lambda 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493491.1
SIO_010081: CRYL1
subclass of: SO_0000673
so part of: CRYL1
location: complement(join(2378930..2378994,2380876..2380981,2411543..2411737,2418496..2418657,2463098..2463224,2482430..2482537,2508198..2508238))
location: region:2378930-2508238:-1
so has part: feature:2508198-2508238:-1:exon
so has part: feature:2482430-2482537:-1:exon
so has part: feature:2463098-2463224:-1:exon
so has part: feature:2418496-2418657:-1:exon
so has part: feature:2411543-2411737:-1:exon
so has part: feature:2380876-2380981:-1:exon
so has part: feature:2378930-2378994:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2508198-2508238:-1:exon

position:2508198:-1
position: 2508198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2482430-2482537:-1:exon

position:2482430:-1
position: 2482430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2482537:-1
position: 2482537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2463098-2463224:-1:exon

position:2463098:-1
position: 2463098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2463224:-1
position: 2463224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2418496-2418657:-1:exon

position:2418496:-1
position: 2418496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2418657:-1
position: 2418657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2411543-2411737:-1:exon

position:2411543:-1
position: 2411543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2411737:-1
position: 2411737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2380876-2380981:-1:exon

position:2380876:-1
position: 2380876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2380981:-1
position: 2380981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2378930-2378994:-1:exon

position:2378994:-1
position: 2378994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRYL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CRYL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lambda-crystallin homolog
translation: MASTAGSEVLIVGSGLIGRSWAMLFASGGFKVKLYDIEQQQITNALESIRKEMKALEQAGSLKGSLSAQQQLSLISGCSNLAEAIEGAVHIQECVPENLDLKKKIFAQLDRMVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYVPLVELVPHPETSPATMDRTHALMRKIGQSPVRVLKEVDGFVLNRLQYAIIAEAWRLVEDGIVSPGDLDLVMSDGLGMRYAFIGPLETMHLNAEVRFPPPDEWNVHVSVESKVVL
SIO_010081: CRYL1
subclass of: SO_0000673
so part of: CRYL1
location: complement(join(2378930..2378994,2380876..2380981,2411543..2411737,2418496..2418657,2463098..2463224,2482430..2482537,2508198..2508238))
location: region:2378930-2508238:-1
so has part: feature:2508198-2508238:-1:exon
so has part: feature:2482430-2482537:-1:exon
so has part: feature:2463098-2463224:-1:exon
so has part: feature:2418496-2418657:-1:exon
so has part: feature:2411543-2411737:-1:exon
so has part: feature:2380876-2380981:-1:exon
so has part: feature:2378930-2378994:-1:exon

XP_036349384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2508198-2508238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2482430-2482537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2463098-2463224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2418496-2418657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2411543-2411737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2380876-2380981:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2378930-2378994:-1:exon

IFT88
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2552354..2651270
location: region:2552354-2651270:1
so has part: feature:2552354-2651270:1:exon
subclass of: SO_0000010

101520628
type: Gene
SIO_000068: ncbigene

position:2552354:1
position: 2552354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2651270:1
position: 2651270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2552354-2651270:1:exon

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: IFT88
product: intraflagellar transport 88, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 mRNAs, 4 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577592.3
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(2552354..2552449,2557008..2557070,2563152..2563208,2564787..2564840,2565374..2565437,2566564..2566633,2569541..2569631,2571110..2571214,2572275..2572377,2574651..2574765,2576427..2576658,2584146..2584216,2590019..2590105,2603941..2604040,2609143..2609229,2614411..2614597,2619278..2619386,2621418..2621568,2623132..2623247,2624603..2624655,2628237..2628302,2633246..2633352,2635740..2635806,2650629..2650739,2650961..2651270)
location: region:2552354-2651270:1
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so has part: feature:2571110-2571214:1:exon
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so has part: feature:2574651-2574765:1:exon
so has part: feature:2576427-2576658:1:exon
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so has part: feature:2603941-2604040:1:exon
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so has part: feature:2614411-2614597:1:exon
so has part: feature:2619278-2619386:1:exon
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so has part: feature:2628237-2628302:1:exon
so has part: feature:2633246-2633352:1:exon
so has part: feature:2635740-2635806:1:exon
so has part: feature:2650629-2650739:1:exon
so has part: feature:2650961-2651270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2552354-2552449:1:exon

position:2552449:1
position: 2552449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2557008-2557070:1:exon

position:2557008:1
position: 2557008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2557070:1
position: 2557070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2563152-2563208:1:exon

position:2563152:1
position: 2563152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2563208:1
position: 2563208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2564787-2564840:1:exon

position:2564787:1
position: 2564787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2564840:1
position: 2564840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2565374-2565437:1:exon

position:2565374:1
position: 2565374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2565437:1
position: 2565437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2566564-2566633:1:exon

position:2566564:1
position: 2566564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2566633:1
position: 2566633
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:2569541-2569631:1:exon

position:2569541:1
position: 2569541
reference: sequence
type: ForwardStrandPosition
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position:2569631:1
position: 2569631
reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:2571110-2571214:1:exon

position:2571110:1
position: 2571110
reference: sequence
type: ForwardStrandPosition
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position:2571214:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:2572275-2572377:1:exon

position:2572275:1
position: 2572275
reference: sequence
type: ForwardStrandPosition
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position:2572377:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:2574651-2574765:1:exon

position:2574651:1
position: 2574651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2574765:1
position: 2574765
reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:2576427-2576658:1:exon

position:2576427:1
position: 2576427
reference: sequence
type: ForwardStrandPosition
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position:2576658:1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:2584146-2584216:1:exon

position:2584146:1
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reference: sequence
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position:2584216:1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:2590019-2590105:1:exon

position:2590019:1
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reference: sequence
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position:2590105:1
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urn:…
SIO_000300: 14
SIO_000628: feature:2603941-2604040:1:exon

position:2603941:1
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reference: sequence
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position:2604040:1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:2609143-2609229:1:exon

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reference: sequence
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position:2609229:1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:2614411-2614597:1:exon

position:2614411:1
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reference: sequence
type: ForwardStrandPosition
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position:2614597:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:2619278-2619386:1:exon

position:2619278:1
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reference: sequence
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position:2619386:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:2621418-2621568:1:exon

position:2621418:1
position: 2621418
reference: sequence
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type: ExactPosition

position:2621568:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:2623132-2623247:1:exon

position:2623132:1
position: 2623132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2623247:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2624603-2624655:1:exon

position:2624603:1
position: 2624603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2624655:1
position: 2624655
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:2628237-2628302:1:exon

position:2628237:1
position: 2628237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2628302:1
position: 2628302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2633246-2633352:1:exon

position:2633246:1
position: 2633246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2633352:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:2635740-2635806:1:exon

position:2635740:1
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reference: sequence
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position:2635806:1
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reference: sequence
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urn:…
SIO_000300: 24
SIO_000628: feature:2650629-2650739:1:exon

position:2650629:1
position: 2650629
reference: sequence
type: ForwardStrandPosition
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position:2650739:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:2650961-2651270:1:exon

position:2650961:1
position: 2650961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: IFT88
product: intraflagellar transport 88, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 2 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493381.1
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(2552354..2552449,2557008..2557070,2563152..2563208,2564787..2564840,2565374..2565437,2566564..2566633,2569541..2569631,2571110..2571214,2572275..2572377,2574651..2574765,2576427..2576470,2576573..2576658,2584146..2584216,2590019..2590105,2603941..2604040,2609143..2609229,2614411..2614597,2619278..2619386,2621418..2621568,2623132..2623247,2624603..2624655,2628237..2628302,2633246..2633352,2635740..2635806,2650629..2650739,2650961..2651270)
location: region:2552354-2651270:1
so has part: feature:2552354-2552449:1:exon
so has part: feature:2557008-2557070:1:exon
so has part: feature:2563152-2563208:1:exon
so has part: feature:2564787-2564840:1:exon
so has part: feature:2565374-2565437:1:exon
so has part: feature:2566564-2566633:1:exon
so has part: feature:2569541-2569631:1:exon
so has part: feature:2571110-2571214:1:exon
so has part: feature:2572275-2572377:1:exon
so has part: feature:2574651-2574765:1:exon
so has part: feature:2576427-2576470:1:exon
so has part: feature:2576573-2576658:1:exon
so has part: feature:2584146-2584216:1:exon
so has part: feature:2590019-2590105:1:exon
so has part: feature:2603941-2604040:1:exon
so has part: feature:2609143-2609229:1:exon
so has part: feature:2614411-2614597:1:exon
so has part: feature:2619278-2619386:1:exon
so has part: feature:2621418-2621568:1:exon
so has part: feature:2623132-2623247:1:exon
so has part: feature:2624603-2624655:1:exon
so has part: feature:2628237-2628302:1:exon
so has part: feature:2633246-2633352:1:exon
so has part: feature:2635740-2635806:1:exon
so has part: feature:2650629-2650739:1:exon
so has part: feature:2650961-2651270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2552354-2552449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557008-2557070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2563152-2563208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2564787-2564840:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2565374-2565437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2566564-2566633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2569541-2569631:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2571110-2571214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2572275-2572377:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2574651-2574765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2576427-2576470:1:exon

position:2576470:1
position: 2576470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2576573-2576658:1:exon

position:2576573:1
position: 2576573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2584146-2584216:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2590019-2590105:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2603941-2604040:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2609143-2609229:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2614411-2614597:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2619278-2619386:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2621418-2621568:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2623132-2623247:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2624603-2624655:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2628237-2628302:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2633246-2633352:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2635740-2635806:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2650629-2650739:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2650961-2651270:1:exon

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: IFT88
product: intraflagellar transport 88, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493382.1
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(2552354..2552449,2557008..2557070,2563152..2563208,2564787..2564840,2565374..2565437,2566564..2566633,2569541..2569631,2571110..2571214,2572275..2572377,2574651..2574765,2576427..2576470,2576573..2576658,2584146..2584216,2590019..2590105,2603941..2604040,2609143..2609229,2614411..2614597,2619278..2619386,2621418..2621568,2623132..2623247,2624603..2624655,2628237..2628302,2633246..2633352,2635740..2635806,2650961..2651270)
location: region:2552354-2651270:1
so has part: feature:2552354-2552449:1:exon
so has part: feature:2557008-2557070:1:exon
so has part: feature:2563152-2563208:1:exon
so has part: feature:2564787-2564840:1:exon
so has part: feature:2565374-2565437:1:exon
so has part: feature:2566564-2566633:1:exon
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so has part: feature:2571110-2571214:1:exon
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so has part: feature:2574651-2574765:1:exon
so has part: feature:2576427-2576470:1:exon
so has part: feature:2576573-2576658:1:exon
so has part: feature:2584146-2584216:1:exon
so has part: feature:2590019-2590105:1:exon
so has part: feature:2603941-2604040:1:exon
so has part: feature:2609143-2609229:1:exon
so has part: feature:2614411-2614597:1:exon
so has part: feature:2619278-2619386:1:exon
so has part: feature:2621418-2621568:1:exon
so has part: feature:2623132-2623247:1:exon
so has part: feature:2624603-2624655:1:exon
so has part: feature:2628237-2628302:1:exon
so has part: feature:2633246-2633352:1:exon
so has part: feature:2635740-2635806:1:exon
so has part: feature:2650961-2651270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2552354-2552449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557008-2557070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2563152-2563208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2564787-2564840:1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:2566564-2566633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2569541-2569631:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2571110-2571214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2572275-2572377:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2574651-2574765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2576427-2576470:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2576573-2576658:1:exon

urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
SIO_000628: feature:2590019-2590105:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2603941-2604040:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2609143-2609229:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2614411-2614597:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2619278-2619386:1:exon

urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:2624603-2624655:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2628237-2628302:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2633246-2633352:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2635740-2635806:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2650961-2651270:1:exon

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: IFT88
product: intraflagellar transport 88, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493378.1
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(2552360..2552449,2557008..2557070,2563152..2563208,2564787..2564840,2565374..2565437,2566564..2566633,2569541..2569631,2571110..2571214,2572275..2572377,2574651..2574765,2576427..2576658,2584146..2584216,2590019..2590105,2603941..2604040,2609143..2609229,2614411..2614597,2619278..2619386,2621418..2621568,2623132..2623247,2624603..2624655,2628237..2628302,2633246..2633352,2635740..2635806,2650961..2651270)
location: region:2552360-2651270:1
so has part: feature:2552360-2552449:1:exon
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so has part: feature:2633246-2633352:1:exon
so has part: feature:2635740-2635806:1:exon
so has part: feature:2650961-2651270:1:exon

position:2552360:1
position: 2552360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2552360-2552449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557008-2557070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2563152-2563208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2564787-2564840:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2565374-2565437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2566564-2566633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2569541-2569631:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2571110-2571214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2572275-2572377:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2574651-2574765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2576427-2576658:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2584146-2584216:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2590019-2590105:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2603941-2604040:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2609143-2609229:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2614411-2614597:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2619278-2619386:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2621418-2621568:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2623132-2623247:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2624603-2624655:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2628237-2628302:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2633246-2633352:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2635740-2635806:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2650961-2651270:1:exon

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: IFT88
product: intraflagellar transport 88, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577591.3
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(2552360..2552449,2557008..2557070,2564787..2564840,2565374..2565437,2566564..2566633,2569541..2569631,2571110..2571214,2572275..2572377,2574651..2574765,2576427..2576658,2584146..2584216,2590019..2590105,2603941..2604040,2609143..2609229,2614411..2614597,2619278..2619386,2621418..2621568,2623132..2623247,2624603..2624655,2628237..2628302,2633246..2633352,2635740..2635806,2650629..2650739,2650961..2651270)
location: region:2552360-2651270:1
so has part: feature:2552360-2552449:1:exon
so has part: feature:2557008-2557070:1:exon
so has part: feature:2564787-2564840:1:exon
so has part: feature:2565374-2565437:1:exon
so has part: feature:2566564-2566633:1:exon
so has part: feature:2569541-2569631:1:exon
so has part: feature:2571110-2571214:1:exon
so has part: feature:2572275-2572377:1:exon
so has part: feature:2574651-2574765:1:exon
so has part: feature:2576427-2576658:1:exon
so has part: feature:2584146-2584216:1:exon
so has part: feature:2590019-2590105:1:exon
so has part: feature:2603941-2604040:1:exon
so has part: feature:2609143-2609229:1:exon
so has part: feature:2614411-2614597:1:exon
so has part: feature:2619278-2619386:1:exon
so has part: feature:2621418-2621568:1:exon
so has part: feature:2623132-2623247:1:exon
so has part: feature:2624603-2624655:1:exon
so has part: feature:2628237-2628302:1:exon
so has part: feature:2633246-2633352:1:exon
so has part: feature:2635740-2635806:1:exon
so has part: feature:2650629-2650739:1:exon
so has part: feature:2650961-2651270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2552360-2552449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557008-2557070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2564787-2564840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2565374-2565437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2566564-2566633:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2569541-2569631:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2571110-2571214:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2572275-2572377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2574651-2574765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2576427-2576658:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2584146-2584216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2590019-2590105:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2603941-2604040:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2609143-2609229:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2614411-2614597:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2619278-2619386:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2621418-2621568:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2623132-2623247:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2624603-2624655:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2628237-2628302:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2633246-2633352:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2635740-2635806:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2650629-2650739:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2650961-2651270:1:exon

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: IFT88
product: intraflagellar transport 88, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493379.1
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(2552360..2552449,2557008..2557070,2564787..2564840,2565374..2565437,2566564..2566633,2569541..2569631,2571110..2571214,2572275..2572377,2574651..2574765,2576427..2576658,2584146..2584216,2603941..2604040,2609143..2609229,2614411..2614597,2619278..2619386,2621418..2621568,2623132..2623247,2624603..2624655,2628237..2628302,2633246..2633352,2635740..2635806,2650629..2650739,2650961..2651270)
location: region:2552360-2651270:1
so has part: feature:2552360-2552449:1:exon
so has part: feature:2557008-2557070:1:exon
so has part: feature:2564787-2564840:1:exon
so has part: feature:2565374-2565437:1:exon
so has part: feature:2566564-2566633:1:exon
so has part: feature:2569541-2569631:1:exon
so has part: feature:2571110-2571214:1:exon
so has part: feature:2572275-2572377:1:exon
so has part: feature:2574651-2574765:1:exon
so has part: feature:2576427-2576658:1:exon
so has part: feature:2584146-2584216:1:exon
so has part: feature:2603941-2604040:1:exon
so has part: feature:2609143-2609229:1:exon
so has part: feature:2614411-2614597:1:exon
so has part: feature:2619278-2619386:1:exon
so has part: feature:2621418-2621568:1:exon
so has part: feature:2623132-2623247:1:exon
so has part: feature:2624603-2624655:1:exon
so has part: feature:2628237-2628302:1:exon
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so has part: feature:2635740-2635806:1:exon
so has part: feature:2650629-2650739:1:exon
so has part: feature:2650961-2651270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2552360-2552449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557008-2557070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2564787-2564840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2565374-2565437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2566564-2566633:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2569541-2569631:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2571110-2571214:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2572275-2572377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2574651-2574765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2576427-2576658:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2584146-2584216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2603941-2604040:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2609143-2609229:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2614411-2614597:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2619278-2619386:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2621418-2621568:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2623132-2623247:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2624603-2624655:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2628237-2628302:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2633246-2633352:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2635740-2635806:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2650629-2650739:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2650961-2651270:1:exon

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: IFT88
product: intraflagellar transport 88, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 55% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493380.1
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(2552360..2552449,2557008..2557070,2564787..2564840,2565374..2565437,2566564..2566633,2569541..2569631,2571110..2571214,2572275..2572377,2574651..2574765,2576427..2576470,2576573..2576658,2584146..2584216,2590019..2590105,2603941..2604040,2609143..2609229,2614411..2614597,2619278..2619386,2621418..2621568,2623132..2623247,2624603..2624655,2628237..2628302,2633246..2633352,2635740..2635806,2650629..2650739,2650961..2651270)
location: region:2552360-2651270:1
so has part: feature:2552360-2552449:1:exon
so has part: feature:2557008-2557070:1:exon
so has part: feature:2564787-2564840:1:exon
so has part: feature:2565374-2565437:1:exon
so has part: feature:2566564-2566633:1:exon
so has part: feature:2569541-2569631:1:exon
so has part: feature:2571110-2571214:1:exon
so has part: feature:2572275-2572377:1:exon
so has part: feature:2574651-2574765:1:exon
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so has part: feature:2576573-2576658:1:exon
so has part: feature:2584146-2584216:1:exon
so has part: feature:2590019-2590105:1:exon
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so has part: feature:2614411-2614597:1:exon
so has part: feature:2619278-2619386:1:exon
so has part: feature:2621418-2621568:1:exon
so has part: feature:2623132-2623247:1:exon
so has part: feature:2624603-2624655:1:exon
so has part: feature:2628237-2628302:1:exon
so has part: feature:2633246-2633352:1:exon
so has part: feature:2635740-2635806:1:exon
so has part: feature:2650629-2650739:1:exon
so has part: feature:2650961-2651270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2552360-2552449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557008-2557070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2564787-2564840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2565374-2565437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2566564-2566633:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2569541-2569631:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2571110-2571214:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2572275-2572377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2574651-2574765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2576427-2576470:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2576573-2576658:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2584146-2584216:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2590019-2590105:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2603941-2604040:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2609143-2609229:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2614411-2614597:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2619278-2619386:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2621418-2621568:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2623132-2623247:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2624603-2624655:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2628237-2628302:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2633246-2633352:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2635740-2635806:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2650629-2650739:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2650961-2651270:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X5
translation: MMQNVHLAADTDEDDLYSGYNDYNPTYDTEDLENDTAFQQAVRTSHGRRPPITAKIPSTAVTRPIATGYGSKTSLTSSLGRPITAAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSRGPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLANQYSVNEMYAEALNTYQVIVKNKMFSNAGKLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMSPNLKAGFNLILSYFAIGDQEKMKKSFQKLIAVPLEIDEDDKYISPSDDAHTNLVIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEINKAITYLRQKDFTQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLSYKKLNRLNEALDCFLKLHAILRNSAQVLYQIANVYELMEDPNQAIEWLMQLISVVPTDCRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQDYATKLKRLEKMKEMREQRIKSGRDGSGSSRGRREGSAGSDSGQNCSASSKSERLSAKLRALPGTNEPYESSSNKEIDASYVDPLGPQVERPKTAAKKRVDEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(2552360..2552449,2557008..2557070,2563152..2563208,2564787..2564840,2565374..2565437,2566564..2566633,2569541..2569631,2571110..2571214,2572275..2572377,2574651..2574765,2576427..2576658,2584146..2584216,2590019..2590105,2603941..2604040,2609143..2609229,2614411..2614597,2619278..2619386,2621418..2621568,2623132..2623247,2624603..2624655,2628237..2628302,2633246..2633352,2635740..2635806,2650629..2650739,2650961..2651082)
location: region:2552360-2651082:1
so has part: feature:2552360-2552449:1:exon
so has part: feature:2557008-2557070:1:exon
so has part: feature:2563152-2563208:1:exon
so has part: feature:2564787-2564840:1:exon
so has part: feature:2565374-2565437:1:exon
so has part: feature:2566564-2566633:1:exon
so has part: feature:2569541-2569631:1:exon
so has part: feature:2571110-2571214:1:exon
so has part: feature:2572275-2572377:1:exon
so has part: feature:2574651-2574765:1:exon
so has part: feature:2576427-2576658:1:exon
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so has part: feature:2590019-2590105:1:exon
so has part: feature:2603941-2604040:1:exon
so has part: feature:2609143-2609229:1:exon
so has part: feature:2614411-2614597:1:exon
so has part: feature:2619278-2619386:1:exon
so has part: feature:2621418-2621568:1:exon
so has part: feature:2623132-2623247:1:exon
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so has part: feature:2633246-2633352:1:exon
so has part: feature:2635740-2635806:1:exon
so has part: feature:2650629-2650739:1:exon
so has part: feature:2650961-2651082:1:exon

XP_004577649.1
type: Protein
SIO_000068: ncbiprotein

position:2651082:1
position: 2651082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2552360-2552449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557008-2557070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2563152-2563208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2564787-2564840:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2565374-2565437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2566564-2566633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2569541-2569631:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2571110-2571214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2572275-2572377:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2574651-2574765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2576427-2576658:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2584146-2584216:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2590019-2590105:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2603941-2604040:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2609143-2609229:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2614411-2614597:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2619278-2619386:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2621418-2621568:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2623132-2623247:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2624603-2624655:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2628237-2628302:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2633246-2633352:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2635740-2635806:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2650629-2650739:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2650961-2651082:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X2
translation: MMQNVHLAADTDEDDLYSGYNDYNPTYDTEDLENDTAFQQAVRTSHGRRPPITAKIPSTAVTRPIATGYGSKTSLTSSLGRPITAAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSRGPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLANQYSVNEMYAEALNTYQVIVKNKMFSNAGKLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMSPNLKAGFNLILSYFAIGDQEKMKKSFQKLIAVPLEIDEDDKYISPSDDAHTNLVIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEINKAITYLRQKDFTQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLSYKKLNRLNEALDCFLKLHAILRNSAQVLYQIANVYELMEDPNQAIEWLMQLISVVPTDCRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQDYATKLKRLEKMKEMREQRIKSGRDGSGSSRGRREGSAGSDASYVDPLGPQVERPKTAAKKRVDEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(2552360..2552449,2557008..2557070,2563152..2563208,2564787..2564840,2565374..2565437,2566564..2566633,2569541..2569631,2571110..2571214,2572275..2572377,2574651..2574765,2576427..2576658,2584146..2584216,2590019..2590105,2603941..2604040,2609143..2609229,2614411..2614597,2619278..2619386,2621418..2621568,2623132..2623247,2624603..2624655,2628237..2628302,2633246..2633352,2635740..2635806,2650961..2651082)
location: region:2552360-2651082:1
so has part: feature:2552360-2552449:1:exon
so has part: feature:2557008-2557070:1:exon
so has part: feature:2563152-2563208:1:exon
so has part: feature:2564787-2564840:1:exon
so has part: feature:2565374-2565437:1:exon
so has part: feature:2566564-2566633:1:exon
so has part: feature:2569541-2569631:1:exon
so has part: feature:2571110-2571214:1:exon
so has part: feature:2572275-2572377:1:exon
so has part: feature:2574651-2574765:1:exon
so has part: feature:2576427-2576658:1:exon
so has part: feature:2584146-2584216:1:exon
so has part: feature:2590019-2590105:1:exon
so has part: feature:2603941-2604040:1:exon
so has part: feature:2609143-2609229:1:exon
so has part: feature:2614411-2614597:1:exon
so has part: feature:2619278-2619386:1:exon
so has part: feature:2621418-2621568:1:exon
so has part: feature:2623132-2623247:1:exon
so has part: feature:2624603-2624655:1:exon
so has part: feature:2628237-2628302:1:exon
so has part: feature:2633246-2633352:1:exon
so has part: feature:2635740-2635806:1:exon
so has part: feature:2650961-2651082:1:exon

XP_036349271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2552360-2552449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557008-2557070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2563152-2563208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2564787-2564840:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2565374-2565437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2566564-2566633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2569541-2569631:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2571110-2571214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2572275-2572377:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2574651-2574765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2576427-2576658:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2584146-2584216:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2590019-2590105:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2603941-2604040:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2609143-2609229:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2614411-2614597:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2619278-2619386:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2621418-2621568:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2623132-2623247:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2624603-2624655:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2628237-2628302:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2633246-2633352:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2635740-2635806:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2650961-2651082:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X6
translation: MMQNVHLAADTDEDDLYSGYNDYNPTYDTEDLENDTAFQQAVRTSHGRRPPITAKIPSTAVTRPIATGYGSKTSLTSSLGRPITAAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSRGPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLANQYSVNEMYAEALNTYQVIVKNKMFSNAGKLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTDQEKMKKSFQKLIAVPLEIDEDDKYISPSDDAHTNLVIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEINKAITYLRQKDFTQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLSYKKLNRLNEALDCFLKLHAILRNSAQVLYQIANVYELMEDPNQAIEWLMQLISVVPTDCRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQDYATKLKRLEKMKEMREQRIKSGRDGSGSSRGRREGSAGSDSGQNCSASSKSERLSAKLRALPGTNEPYESSSNKEIDASYVDPLGPQVERPKTAAKKRVDEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(2552360..2552449,2557008..2557070,2563152..2563208,2564787..2564840,2565374..2565437,2566564..2566633,2569541..2569631,2571110..2571214,2572275..2572377,2574651..2574765,2576427..2576470,2576573..2576658,2584146..2584216,2590019..2590105,2603941..2604040,2609143..2609229,2614411..2614597,2619278..2619386,2621418..2621568,2623132..2623247,2624603..2624655,2628237..2628302,2633246..2633352,2635740..2635806,2650629..2650739,2650961..2651082)
location: region:2552360-2651082:1
so has part: feature:2552360-2552449:1:exon
so has part: feature:2557008-2557070:1:exon
so has part: feature:2563152-2563208:1:exon
so has part: feature:2564787-2564840:1:exon
so has part: feature:2565374-2565437:1:exon
so has part: feature:2566564-2566633:1:exon
so has part: feature:2569541-2569631:1:exon
so has part: feature:2571110-2571214:1:exon
so has part: feature:2572275-2572377:1:exon
so has part: feature:2574651-2574765:1:exon
so has part: feature:2576427-2576470:1:exon
so has part: feature:2576573-2576658:1:exon
so has part: feature:2584146-2584216:1:exon
so has part: feature:2590019-2590105:1:exon
so has part: feature:2603941-2604040:1:exon
so has part: feature:2609143-2609229:1:exon
so has part: feature:2614411-2614597:1:exon
so has part: feature:2619278-2619386:1:exon
so has part: feature:2621418-2621568:1:exon
so has part: feature:2623132-2623247:1:exon
so has part: feature:2624603-2624655:1:exon
so has part: feature:2628237-2628302:1:exon
so has part: feature:2633246-2633352:1:exon
so has part: feature:2635740-2635806:1:exon
so has part: feature:2650629-2650739:1:exon
so has part: feature:2650961-2651082:1:exon

XP_036349274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2552360-2552449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557008-2557070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2563152-2563208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2564787-2564840:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2565374-2565437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2566564-2566633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2569541-2569631:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2571110-2571214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2572275-2572377:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2574651-2574765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2576427-2576470:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2576573-2576658:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2584146-2584216:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2590019-2590105:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2603941-2604040:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2609143-2609229:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2614411-2614597:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2619278-2619386:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2621418-2621568:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2623132-2623247:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2624603-2624655:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2628237-2628302:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2633246-2633352:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2635740-2635806:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2650629-2650739:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2650961-2651082:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X7
translation: MMQNVHLAADTDEDDLYSGYNDYNPTYDTEDLENDTAFQQAVRTSHGRRPPITAKIPSTAVTRPIATGYGSKTSLTSSLGRPITAAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSRGPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLANQYSVNEMYAEALNTYQVIVKNKMFSNAGKLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTDQEKMKKSFQKLIAVPLEIDEDDKYISPSDDAHTNLVIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEINKAITYLRQKDFTQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLSYKKLNRLNEALDCFLKLHAILRNSAQVLYQIANVYELMEDPNQAIEWLMQLISVVPTDCRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQDYATKLKRLEKMKEMREQRIKSGRDGSGSSRGRREGSAGSDASYVDPLGPQVERPKTAAKKRVDEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(2552360..2552449,2557008..2557070,2563152..2563208,2564787..2564840,2565374..2565437,2566564..2566633,2569541..2569631,2571110..2571214,2572275..2572377,2574651..2574765,2576427..2576470,2576573..2576658,2584146..2584216,2590019..2590105,2603941..2604040,2609143..2609229,2614411..2614597,2619278..2619386,2621418..2621568,2623132..2623247,2624603..2624655,2628237..2628302,2633246..2633352,2635740..2635806,2650961..2651082)
location: region:2552360-2651082:1
so has part: feature:2552360-2552449:1:exon
so has part: feature:2557008-2557070:1:exon
so has part: feature:2563152-2563208:1:exon
so has part: feature:2564787-2564840:1:exon
so has part: feature:2565374-2565437:1:exon
so has part: feature:2566564-2566633:1:exon
so has part: feature:2569541-2569631:1:exon
so has part: feature:2571110-2571214:1:exon
so has part: feature:2572275-2572377:1:exon
so has part: feature:2574651-2574765:1:exon
so has part: feature:2576427-2576470:1:exon
so has part: feature:2576573-2576658:1:exon
so has part: feature:2584146-2584216:1:exon
so has part: feature:2590019-2590105:1:exon
so has part: feature:2603941-2604040:1:exon
so has part: feature:2609143-2609229:1:exon
so has part: feature:2614411-2614597:1:exon
so has part: feature:2619278-2619386:1:exon
so has part: feature:2621418-2621568:1:exon
so has part: feature:2623132-2623247:1:exon
so has part: feature:2624603-2624655:1:exon
so has part: feature:2628237-2628302:1:exon
so has part: feature:2633246-2633352:1:exon
so has part: feature:2635740-2635806:1:exon
so has part: feature:2650961-2651082:1:exon

XP_036349275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2552360-2552449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557008-2557070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2563152-2563208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2564787-2564840:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2565374-2565437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2566564-2566633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2569541-2569631:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2571110-2571214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2572275-2572377:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2574651-2574765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2576427-2576470:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2576573-2576658:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2584146-2584216:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2590019-2590105:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2603941-2604040:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2609143-2609229:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2614411-2614597:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2619278-2619386:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2621418-2621568:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2623132-2623247:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2624603-2624655:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2628237-2628302:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2633246-2633352:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2635740-2635806:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2650961-2651082:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X1
translation: MMQNVHLAADTDEDDLYSGYNDYNPTYDTEDLENDTAFQQAVRTSHGRRPPSKTSLTSSLGRPITAAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSRGPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLANQYSVNEMYAEALNTYQVIVKNKMFSNAGKLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMSPNLKAGFNLILSYFAIGDQEKMKKSFQKLIAVPLEIDEDDKYISPSDDAHTNLVIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEINKAITYLRQKDFTQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLSYKKLNRLNEALDCFLKLHAILRNSAQVLYQIANVYELMEDPNQAIEWLMQLISVVPTDCRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQDYATKLKRLEKMKEMREQRIKSGRDGSGSSRGRREGSAGSDSGQNCSASSKSERLSAKLRALPGTNEPYESSSNKEIDASYVDPLGPQVERPKTAAKKRVDEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(2552360..2552449,2557008..2557070,2564787..2564840,2565374..2565437,2566564..2566633,2569541..2569631,2571110..2571214,2572275..2572377,2574651..2574765,2576427..2576658,2584146..2584216,2590019..2590105,2603941..2604040,2609143..2609229,2614411..2614597,2619278..2619386,2621418..2621568,2623132..2623247,2624603..2624655,2628237..2628302,2633246..2633352,2635740..2635806,2650629..2650739,2650961..2651082)
location: region:2552360-2651082:1
so has part: feature:2552360-2552449:1:exon
so has part: feature:2557008-2557070:1:exon
so has part: feature:2564787-2564840:1:exon
so has part: feature:2565374-2565437:1:exon
so has part: feature:2566564-2566633:1:exon
so has part: feature:2569541-2569631:1:exon
so has part: feature:2571110-2571214:1:exon
so has part: feature:2572275-2572377:1:exon
so has part: feature:2574651-2574765:1:exon
so has part: feature:2576427-2576658:1:exon
so has part: feature:2584146-2584216:1:exon
so has part: feature:2590019-2590105:1:exon
so has part: feature:2603941-2604040:1:exon
so has part: feature:2609143-2609229:1:exon
so has part: feature:2614411-2614597:1:exon
so has part: feature:2619278-2619386:1:exon
so has part: feature:2621418-2621568:1:exon
so has part: feature:2623132-2623247:1:exon
so has part: feature:2624603-2624655:1:exon
so has part: feature:2628237-2628302:1:exon
so has part: feature:2633246-2633352:1:exon
so has part: feature:2635740-2635806:1:exon
so has part: feature:2650629-2650739:1:exon
so has part: feature:2650961-2651082:1:exon

XP_004577648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2552360-2552449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557008-2557070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2564787-2564840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2565374-2565437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2566564-2566633:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2569541-2569631:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2571110-2571214:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2572275-2572377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2574651-2574765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2576427-2576658:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2584146-2584216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2590019-2590105:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2603941-2604040:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2609143-2609229:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2614411-2614597:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2619278-2619386:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2621418-2621568:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2623132-2623247:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2624603-2624655:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2628237-2628302:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2633246-2633352:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2635740-2635806:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2650629-2650739:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2650961-2651082:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X3
translation: MMQNVHLAADTDEDDLYSGYNDYNPTYDTEDLENDTAFQQAVRTSHGRRPPSKTSLTSSLGRPITAAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSRGPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLANQYSVNEMYAEALNTYQVIVKNKMFSNAGKLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMSPNLKAGFNLILSYFAIGDQEKMKKSFQKLIAVPLEIDEDDKYISPSDDAHTNLVIEAIKNDHLRQMERERCVEVVKASQYVELANDLEINKAITYLRQKDFTQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLSYKKLNRLNEALDCFLKLHAILRNSAQVLYQIANVYELMEDPNQAIEWLMQLISVVPTDCRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQDYATKLKRLEKMKEMREQRIKSGRDGSGSSRGRREGSAGSDSGQNCSASSKSERLSAKLRALPGTNEPYESSSNKEIDASYVDPLGPQVERPKTAAKKRVDEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(2552360..2552449,2557008..2557070,2564787..2564840,2565374..2565437,2566564..2566633,2569541..2569631,2571110..2571214,2572275..2572377,2574651..2574765,2576427..2576658,2584146..2584216,2603941..2604040,2609143..2609229,2614411..2614597,2619278..2619386,2621418..2621568,2623132..2623247,2624603..2624655,2628237..2628302,2633246..2633352,2635740..2635806,2650629..2650739,2650961..2651082)
location: region:2552360-2651082:1
so has part: feature:2552360-2552449:1:exon
so has part: feature:2557008-2557070:1:exon
so has part: feature:2564787-2564840:1:exon
so has part: feature:2565374-2565437:1:exon
so has part: feature:2566564-2566633:1:exon
so has part: feature:2569541-2569631:1:exon
so has part: feature:2571110-2571214:1:exon
so has part: feature:2572275-2572377:1:exon
so has part: feature:2574651-2574765:1:exon
so has part: feature:2576427-2576658:1:exon
so has part: feature:2584146-2584216:1:exon
so has part: feature:2603941-2604040:1:exon
so has part: feature:2609143-2609229:1:exon
so has part: feature:2614411-2614597:1:exon
so has part: feature:2619278-2619386:1:exon
so has part: feature:2621418-2621568:1:exon
so has part: feature:2623132-2623247:1:exon
so has part: feature:2624603-2624655:1:exon
so has part: feature:2628237-2628302:1:exon
so has part: feature:2633246-2633352:1:exon
so has part: feature:2635740-2635806:1:exon
so has part: feature:2650629-2650739:1:exon
so has part: feature:2650961-2651082:1:exon

XP_036349272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2552360-2552449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557008-2557070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2564787-2564840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2565374-2565437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2566564-2566633:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2569541-2569631:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2571110-2571214:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2572275-2572377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2574651-2574765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2576427-2576658:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2584146-2584216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2603941-2604040:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2609143-2609229:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2614411-2614597:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2619278-2619386:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2621418-2621568:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2623132-2623247:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2624603-2624655:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2628237-2628302:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2633246-2633352:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2635740-2635806:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2650629-2650739:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2650961-2651082:1:exon

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 88 homolog isoform X4
translation: MMQNVHLAADTDEDDLYSGYNDYNPTYDTEDLENDTAFQQAVRTSHGRRPPSKTSLTSSLGRPITAAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSRGPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLANQYSVNEMYAEALNTYQVIVKNKMFSNAGKLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTDQEKMKKSFQKLIAVPLEIDEDDKYISPSDDAHTNLVIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEINKAITYLRQKDFTQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLSYKKLNRLNEALDCFLKLHAILRNSAQVLYQIANVYELMEDPNQAIEWLMQLISVVPTDCRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQDYATKLKRLEKMKEMREQRIKSGRDGSGSSRGRREGSAGSDSGQNCSASSKSERLSAKLRALPGTNEPYESSSNKEIDASYVDPLGPQVERPKTAAKKRVDEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(2552360..2552449,2557008..2557070,2564787..2564840,2565374..2565437,2566564..2566633,2569541..2569631,2571110..2571214,2572275..2572377,2574651..2574765,2576427..2576470,2576573..2576658,2584146..2584216,2590019..2590105,2603941..2604040,2609143..2609229,2614411..2614597,2619278..2619386,2621418..2621568,2623132..2623247,2624603..2624655,2628237..2628302,2633246..2633352,2635740..2635806,2650629..2650739,2650961..2651082)
location: region:2552360-2651082:1
so has part: feature:2552360-2552449:1:exon
so has part: feature:2557008-2557070:1:exon
so has part: feature:2564787-2564840:1:exon
so has part: feature:2565374-2565437:1:exon
so has part: feature:2566564-2566633:1:exon
so has part: feature:2569541-2569631:1:exon
so has part: feature:2571110-2571214:1:exon
so has part: feature:2572275-2572377:1:exon
so has part: feature:2574651-2574765:1:exon
so has part: feature:2576427-2576470:1:exon
so has part: feature:2576573-2576658:1:exon
so has part: feature:2584146-2584216:1:exon
so has part: feature:2590019-2590105:1:exon
so has part: feature:2603941-2604040:1:exon
so has part: feature:2609143-2609229:1:exon
so has part: feature:2614411-2614597:1:exon
so has part: feature:2619278-2619386:1:exon
so has part: feature:2621418-2621568:1:exon
so has part: feature:2623132-2623247:1:exon
so has part: feature:2624603-2624655:1:exon
so has part: feature:2628237-2628302:1:exon
so has part: feature:2633246-2633352:1:exon
so has part: feature:2635740-2635806:1:exon
so has part: feature:2650629-2650739:1:exon
so has part: feature:2650961-2651082:1:exon

XP_036349273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2552360-2552449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2557008-2557070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2564787-2564840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2565374-2565437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2566564-2566633:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2569541-2569631:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2571110-2571214:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2572275-2572377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2574651-2574765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2576427-2576470:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2576573-2576658:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2584146-2584216:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2590019-2590105:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2603941-2604040:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2609143-2609229:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2614411-2614597:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2619278-2619386:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2621418-2621568:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2623132-2623247:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2624603-2624655:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2628237-2628302:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2633246-2633352:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2635740-2635806:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2650629-2650739:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2650961-2651082:1:exon

IL17D
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: IL17D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2677394..2678575
location: region:2677394-2678575:1
so has part: feature:2677394-2678575:1:exon
subclass of: SO_0000010

101517695
type: Gene
SIO_000068: ncbigene

position:2677394:1
position: 2677394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2678575:1
position: 2678575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2677394-2678575:1:exon

IL17D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: IL17D
product: interleukin 17D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins
transcript id: XM_012926756.1
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(2677394..2677469,2678127..2678575)
location: region:2677394-2678575:1
so has part: feature:2677394-2677469:1:exon
so has part: feature:2678127-2678575:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2677394-2677469:1:exon

position:2677469:1
position: 2677469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2678127-2678575:1:exon

position:2678127:1
position: 2678127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL17D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: IL17D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-17D
translation: MEPFPADTLYVCKGAPWLDQLRSQGWYSLRSACNGTLCTCPGARPWQWLTLCSVPALTCPLLPSLSPCRISYDPARYPKYLPEAYCLCRGCLTGPFGEEDFRFRSTPVYVPTVVLRRTAACAGGRAVYTENYVTIPVGCTCVPEQEKDADSLNSSMDKQGAKLLLGPNDQPAGP
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(2677394..2677469,2678127..2678575)
location: region:2677394-2678575:1
so has part: feature:2677394-2677469:1:exon
so has part: feature:2678127-2678575:1:exon

XP_012782210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2677394-2677469:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2678127-2678575:1:exon

EEF1AKMT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: EEF1AKMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2681304..2705331)
location: region:2681304-2705331:-1
so has part: feature:2681304-2705331:-1:exon
subclass of: SO_0000010

101517450
type: Gene
SIO_000068: ncbigene

position:2681304:-1
position: 2681304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2705331:-1
position: 2705331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2681304-2705331:-1:exon

EEF1AKMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: EEF1AKMT1
product: EEF1A lysine methyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577711.2
SIO_010081: EEF1AKMT1
subclass of: SO_0000673
so part of: EEF1AKMT1
location: complement(join(2681304..2681486,2691494..2691774,2705222..2705331))
location: region:2681304-2705331:-1
so has part: feature:2705222-2705331:-1:exon
so has part: feature:2691494-2691774:-1:exon
so has part: feature:2681304-2681486:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2705222-2705331:-1:exon

position:2705222:-1
position: 2705222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2691494-2691774:-1:exon

position:2691494:-1
position: 2691494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2691774:-1
position: 2691774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2681304-2681486:-1:exon

position:2681486:-1
position: 2681486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EEF1AKMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: EEF1AKMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EEF1A lysine methyltransferase 1
translation: MAVKGEFVFDVWSAARGPEAAHVPGREIEPPTGAARKIACVSAPSVFQKLRELQGEGASACIFEYDKRFAIYGDQFVFYDYNKPLDLPDSIAAHSFDIVVADPPYLSEECLQKTSETIRFLTRAKVLLCTGAVMEEEAARLLGVRMCKFIPQHTRNLANEFRCYVNYDSGLD
SIO_010081: EEF1AKMT1
subclass of: SO_0000673
so part of: EEF1AKMT1
location: complement(join(2681359..2681486,2691494..2691774,2705222..2705331))
location: region:2681359-2705331:-1
so has part: feature:2705222-2705331:-1:exon
so has part: feature:2691494-2691774:-1:exon
so has part: feature:2681359-2681486:-1:exon

XP_004577768.1
type: Protein
SIO_000068: ncbiprotein

position:2681359:-1
position: 2681359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2705222-2705331:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2691494-2691774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2681359-2681486:-1:exon

XPO4
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2730243..2868458)
location: region:2730243-2868458:-1
so has part: feature:2730243-2868458:-1:exon
subclass of: SO_0000010

101520390
type: Gene
SIO_000068: ncbigene

position:2730243:-1
position: 2730243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2868458:-1
position: 2868458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2730243-2868458:-1:exon

XPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: XPO4
product: exportin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493388.1
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(2730243..2731270,2735247..2735365,2738926..2739106,2739802..2740095,2741571..2741745,2742407..2742576,2742942..2743101,2747612..2747789,2748571..2748716,2749209..2749351,2749935..2750111,2762168..2762342,2762591..2762748,2766929..2767041,2800224..2800377,2801088..2801204,2810112..2810250,2840145..2840286,2840641..2840689,2855679..2855686,2858472..2858506,2860050..2860063,2868390..2868458))
location: region:2730243-2868458:-1
so has part: feature:2868390-2868458:-1:exon
so has part: feature:2860050-2860063:-1:exon
so has part: feature:2858472-2858506:-1:exon
so has part: feature:2855679-2855686:-1:exon
so has part: feature:2840641-2840689:-1:exon
so has part: feature:2840145-2840286:-1:exon
so has part: feature:2810112-2810250:-1:exon
so has part: feature:2801088-2801204:-1:exon
so has part: feature:2800224-2800377:-1:exon
so has part: feature:2766929-2767041:-1:exon
so has part: feature:2762591-2762748:-1:exon
so has part: feature:2762168-2762342:-1:exon
so has part: feature:2749935-2750111:-1:exon
so has part: feature:2749209-2749351:-1:exon
so has part: feature:2748571-2748716:-1:exon
so has part: feature:2747612-2747789:-1:exon
so has part: feature:2742942-2743101:-1:exon
so has part: feature:2742407-2742576:-1:exon
so has part: feature:2741571-2741745:-1:exon
so has part: feature:2739802-2740095:-1:exon
so has part: feature:2738926-2739106:-1:exon
so has part: feature:2735247-2735365:-1:exon
so has part: feature:2730243-2731270:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2868390-2868458:-1:exon

position:2868390:-1
position: 2868390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2860050-2860063:-1:exon

position:2860050:-1
position: 2860050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2860063:-1
position: 2860063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2858472-2858506:-1:exon

position:2858472:-1
position: 2858472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2858506:-1
position: 2858506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2855679-2855686:-1:exon

position:2855679:-1
position: 2855679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2855686:-1
position: 2855686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2840641-2840689:-1:exon

position:2840641:-1
position: 2840641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2840689:-1
position: 2840689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2840145-2840286:-1:exon

position:2840145:-1
position: 2840145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2840286:-1
position: 2840286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2810112-2810250:-1:exon

position:2810112:-1
position: 2810112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2810250:-1
position: 2810250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2801088-2801204:-1:exon

position:2801088:-1
position: 2801088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2801204:-1
position: 2801204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2800224-2800377:-1:exon

position:2800224:-1
position: 2800224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2800377:-1
position: 2800377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2766929-2767041:-1:exon

position:2766929:-1
position: 2766929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2767041:-1
position: 2767041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2762591-2762748:-1:exon

position:2762591:-1
position: 2762591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2762748:-1
position: 2762748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2762168-2762342:-1:exon

position:2762168:-1
position: 2762168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2762342:-1
position: 2762342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2749935-2750111:-1:exon

position:2749935:-1
position: 2749935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2750111:-1
position: 2750111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2749209-2749351:-1:exon

position:2749209:-1
position: 2749209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2749351:-1
position: 2749351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2748571-2748716:-1:exon

position:2748571:-1
position: 2748571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2748716:-1
position: 2748716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2747612-2747789:-1:exon

position:2747612:-1
position: 2747612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2747789:-1
position: 2747789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2742942-2743101:-1:exon

position:2742942:-1
position: 2742942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2743101:-1
position: 2743101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2742407-2742576:-1:exon

position:2742407:-1
position: 2742407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2742576:-1
position: 2742576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2741571-2741745:-1:exon

position:2741571:-1
position: 2741571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2741745:-1
position: 2741745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2739802-2740095:-1:exon

position:2739802:-1
position: 2739802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2740095:-1
position: 2740095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2738926-2739106:-1:exon

position:2738926:-1
position: 2738926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2739106:-1
position: 2739106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2735247-2735365:-1:exon

position:2735247:-1
position: 2735247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2735365:-1
position: 2735365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2730243-2731270:-1:exon

position:2731270:-1
position: 2731270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

XPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: XPO4
product: exportin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577590.2
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(2731061..2731270,2733496..2733588,2733991..2734108,2734583..2734713,2735247..2735365,2738926..2739106,2739802..2740095,2741571..2741745,2742407..2742576,2742942..2743101,2747612..2747789,2748571..2748716,2749209..2749351,2749935..2750111,2762168..2762342,2762591..2762748,2766929..2767041,2800224..2800377,2801088..2801204,2810112..2810250,2840145..2840286,2840641..2840689,2855679..2855686,2858472..2858506,2860050..2860063,2868390..2868458))
location: region:2731061-2868458:-1
so has part: feature:2868390-2868458:-1:exon
so has part: feature:2860050-2860063:-1:exon
so has part: feature:2858472-2858506:-1:exon
so has part: feature:2855679-2855686:-1:exon
so has part: feature:2840641-2840689:-1:exon
so has part: feature:2840145-2840286:-1:exon
so has part: feature:2810112-2810250:-1:exon
so has part: feature:2801088-2801204:-1:exon
so has part: feature:2800224-2800377:-1:exon
so has part: feature:2766929-2767041:-1:exon
so has part: feature:2762591-2762748:-1:exon
so has part: feature:2762168-2762342:-1:exon
so has part: feature:2749935-2750111:-1:exon
so has part: feature:2749209-2749351:-1:exon
so has part: feature:2748571-2748716:-1:exon
so has part: feature:2747612-2747789:-1:exon
so has part: feature:2742942-2743101:-1:exon
so has part: feature:2742407-2742576:-1:exon
so has part: feature:2741571-2741745:-1:exon
so has part: feature:2739802-2740095:-1:exon
so has part: feature:2738926-2739106:-1:exon
so has part: feature:2735247-2735365:-1:exon
so has part: feature:2734583-2734713:-1:exon
so has part: feature:2733991-2734108:-1:exon
so has part: feature:2733496-2733588:-1:exon
so has part: feature:2731061-2731270:-1:exon

position:2731061:-1
position: 2731061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2868390-2868458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2860050-2860063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2858472-2858506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2855679-2855686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2840641-2840689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2840145-2840286:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2810112-2810250:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2801088-2801204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2800224-2800377:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2766929-2767041:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2762591-2762748:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2762168-2762342:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2749935-2750111:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2749209-2749351:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2748571-2748716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2747612-2747789:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2742942-2743101:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2742407-2742576:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2741571-2741745:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2739802-2740095:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2738926-2739106:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2735247-2735365:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2734583-2734713:-1:exon

position:2734583:-1
position: 2734583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2734713:-1
position: 2734713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2733991-2734108:-1:exon

position:2733991:-1
position: 2733991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2734108:-1
position: 2734108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2733496-2733588:-1:exon

position:2733496:-1
position: 2733496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2733588:-1
position: 2733588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2731061-2731270:-1:exon

XPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-4 isoform X2
translation: MMAAALGPPEVIAQLENAAKVLMSSPYMVQNEKSDSSQHFFLFFSRSKFCFAQGENLLETSKVDYVLFQAATAIMEAVVREWILLEKGSIESLRTFLLTYVLQRPNLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHEVSQLISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRIFQEEDLRQIFMLTVEVLQEFSRREHLSAQLSSVFQRYLALANQVLSWNFLPPNLGRHYIAMFESSQNVLLKPTESWRETLLDSRVMELFFTVHRKIREDSDMAQDSLQCLAQLASLHGPIFPDEGSQVDYLAHFIEGLLNTINGIEIEDSEAVGISSIISNLITVFPRNVLTAIPSELFSSFVNCLTHLTCSFGRSAALEEVLDKDDMVYMEAYDKLLESWLTLVQDDKHFHKGFFTQHAVQVFNSYIQCHLAAPDGTRNLTANGVASREEEEISELQEDDRDQFSDQLASVGMLGRIAAEHCIPLLTSLLEERVTRLHGQLQRHQQQLLASPGSSTIDNKMLDDLYEDIHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSSEVDINTTLQILGSPGEKASSIPGYNRTDSVIRLLSAVLRVSEVESRAIRADLTHLLSPQMGKDIVWFLKRWAKTYLLVDEKLYDQISVPFSTAFGADTEGSQWIIGYLLQKVISNLSVWSSEQDLANDTVQLLVTLVERRERANLVIQCENWWNLAKQFATRSPPLNFLSSPVQRTLMKALVLGGFAHMDTETKQQYWTEVLQPLQQRFLRVINQENFQQMCQQEEVKQEITATLEALCGIAEATQIDNVAILFNFLMDFLTNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGESKAMNLYEACLTLLQVYSKNNLGRQRIDVTAEEEQYQDLLLIMELLTNLLSKEFIDFSDTDEVFRGHEPGQAANRAVSAADVVLYGVNLILPLMSQDLLKAEYSELVETLLSSQQDPVIYQRLADAFNKLTASSTPPTLDRKQKMAFLKSLEEFMANVGGLLCVK
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(2731073..2731270,2735247..2735365,2738926..2739106,2739802..2740095,2741571..2741745,2742407..2742576,2742942..2743101,2747612..2747789,2748571..2748716,2749209..2749351,2749935..2750111,2762168..2762342,2762591..2762748,2766929..2767041,2800224..2800377,2801088..2801204,2810112..2810250,2840145..2840286,2840641..2840689,2855679..2855686,2858472..2858506,2860050..2860063,2868390..2868458))
location: region:2731073-2868458:-1
so has part: feature:2868390-2868458:-1:exon
so has part: feature:2860050-2860063:-1:exon
so has part: feature:2858472-2858506:-1:exon
so has part: feature:2855679-2855686:-1:exon
so has part: feature:2840641-2840689:-1:exon
so has part: feature:2840145-2840286:-1:exon
so has part: feature:2810112-2810250:-1:exon
so has part: feature:2801088-2801204:-1:exon
so has part: feature:2800224-2800377:-1:exon
so has part: feature:2766929-2767041:-1:exon
so has part: feature:2762591-2762748:-1:exon
so has part: feature:2762168-2762342:-1:exon
so has part: feature:2749935-2750111:-1:exon
so has part: feature:2749209-2749351:-1:exon
so has part: feature:2748571-2748716:-1:exon
so has part: feature:2747612-2747789:-1:exon
so has part: feature:2742942-2743101:-1:exon
so has part: feature:2742407-2742576:-1:exon
so has part: feature:2741571-2741745:-1:exon
so has part: feature:2739802-2740095:-1:exon
so has part: feature:2738926-2739106:-1:exon
so has part: feature:2735247-2735365:-1:exon
so has part: feature:2731073-2731270:-1:exon

XP_036349281.1
type: Protein
SIO_000068: ncbiprotein

position:2731073:-1
position: 2731073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2868390-2868458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2860050-2860063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2858472-2858506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2855679-2855686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2840641-2840689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2840145-2840286:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2810112-2810250:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2801088-2801204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2800224-2800377:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2766929-2767041:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2762591-2762748:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2762168-2762342:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2749935-2750111:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2749209-2749351:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2748571-2748716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2747612-2747789:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2742942-2743101:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2742407-2742576:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2741571-2741745:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2739802-2740095:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2738926-2739106:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2735247-2735365:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2731073-2731270:-1:exon

XPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-4 isoform X1
translation: MMAAALGPPEVIAQLENAAKVLMSSPYMVQNEKSDSSQHFFLFFSRSKFCFAQGENLLETSKVDYVLFQAATAIMEAVVREWILLEKGSIESLRTFLLTYVLQRPNLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHEVSQLISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRIFQEEDLRQIFMLTVEVLQEFSRREHLSAQLSSVFQRYLALANQVLSWNFLPPNLGRHYIAMFESSQNVLLKPTESWRETLLDSRVMELFFTVHRKIREDSDMAQDSLQCLAQLASLHGPIFPDEGSQVDYLAHFIEGLLNTINGIEIEDSEAVGISSIISNLITVFPRNVLTAIPSELFSSFVNCLTHLTCSFGRSAALEEVLDKDDMVYMEAYDKLLESWLTLVQDDKHFHKGFFTQHAVQVFNSYIQCHLAAPDGTRNLTANGVASREEEEISELQEDDRDQFSDQLASVGMLGRIAAEHCIPLLTSLLEERVTRLHGQLQRHQQQLLASPGSSTIDNKMLDDLYEDIHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSSEVDINTTLQILGSPGEKASSIPGYNRTDSVIRLLSAVLRVSEVESRAIRADLTHLLSPQMGKDIVWFLKRWAKTYLLVDEKLYDQISVPFSTAFGADTEGSQWIIGYLLQKVISNLSVWSSEQDLANDTVQLLVTLVERRERANLVIQCENWWNLAKQFATRSPPLNFLSSPVQRTLMKALVLGGFAHMDTETKQQYWTEVLQPLQQRFLRVINQENFQQMCQQEEVKQEITATLEALCGIAEATQIDNVAILFNFLMDFLTNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGESKAMNLYEACLTLLQVYSKNNLGRQRIDVTAEEEQYQDLLLIMELLTNLLSKEFIDFSDTDEVFRGHEPGQAANRAVSAADVVLYGVNLILPLMSQDLLKFPTLCNQYYKLITFICEIFPEKIPQLPEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAEQCAKAQETDSPLFLATRHFLKLVFDMLVLQKHNTEMTTAAGEAFYTLVCLHQAEYSELVETLLSSQQDPVIYQRLADAFNKLTASSTPPTLDRKQKMAFLKSLEEFMANVGGLLCVK
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(2731073..2731270,2733496..2733588,2733991..2734108,2734583..2734713,2735247..2735365,2738926..2739106,2739802..2740095,2741571..2741745,2742407..2742576,2742942..2743101,2747612..2747789,2748571..2748716,2749209..2749351,2749935..2750111,2762168..2762342,2762591..2762748,2766929..2767041,2800224..2800377,2801088..2801204,2810112..2810250,2840145..2840286,2840641..2840689,2855679..2855686,2858472..2858506,2860050..2860063,2868390..2868458))
location: region:2731073-2868458:-1
so has part: feature:2868390-2868458:-1:exon
so has part: feature:2860050-2860063:-1:exon
so has part: feature:2858472-2858506:-1:exon
so has part: feature:2855679-2855686:-1:exon
so has part: feature:2840641-2840689:-1:exon
so has part: feature:2840145-2840286:-1:exon
so has part: feature:2810112-2810250:-1:exon
so has part: feature:2801088-2801204:-1:exon
so has part: feature:2800224-2800377:-1:exon
so has part: feature:2766929-2767041:-1:exon
so has part: feature:2762591-2762748:-1:exon
so has part: feature:2762168-2762342:-1:exon
so has part: feature:2749935-2750111:-1:exon
so has part: feature:2749209-2749351:-1:exon
so has part: feature:2748571-2748716:-1:exon
so has part: feature:2747612-2747789:-1:exon
so has part: feature:2742942-2743101:-1:exon
so has part: feature:2742407-2742576:-1:exon
so has part: feature:2741571-2741745:-1:exon
so has part: feature:2739802-2740095:-1:exon
so has part: feature:2738926-2739106:-1:exon
so has part: feature:2735247-2735365:-1:exon
so has part: feature:2734583-2734713:-1:exon
so has part: feature:2733991-2734108:-1:exon
so has part: feature:2733496-2733588:-1:exon
so has part: feature:2731073-2731270:-1:exon

XP_004577647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2868390-2868458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2860050-2860063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2858472-2858506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2855679-2855686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2840641-2840689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2840145-2840286:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2810112-2810250:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2801088-2801204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2800224-2800377:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2766929-2767041:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2762591-2762748:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2762168-2762342:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2749935-2750111:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2749209-2749351:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2748571-2748716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2747612-2747789:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2742942-2743101:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2742407-2742576:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2741571-2741745:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2739802-2740095:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2738926-2739106:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2735247-2735365:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2734583-2734713:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2733991-2734108:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2733496-2733588:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2731073-2731270:-1:exon

LATS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LATS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2931276..2985849)
location: region:2931276-2985849:-1
so has part: feature:2931276-2985849:-1:exon
subclass of: SO_0000010

101520145
type: Gene
SIO_000068: ncbigene

position:2931276:-1
position: 2931276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2985849:-1
position: 2985849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2931276-2985849:-1:exon

LATS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LATS2
product: large tumor suppressor kinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 Proteins
transcript id: XM_004577589.1
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(2931276..2931770,2933682..2933788,2934985..2935167,2936017..2936599,2937862..2939267,2940866..2940998,2985526..2985849))
location: region:2931276-2985849:-1
so has part: feature:2985526-2985849:-1:exon
so has part: feature:2940866-2940998:-1:exon
so has part: feature:2937862-2939267:-1:exon
so has part: feature:2936017-2936599:-1:exon
so has part: feature:2934985-2935167:-1:exon
so has part: feature:2933682-2933788:-1:exon
so has part: feature:2931276-2931770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2985526-2985849:-1:exon

position:2985526:-1
position: 2985526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2940866-2940998:-1:exon

position:2940866:-1
position: 2940866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940998:-1
position: 2940998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2937862-2939267:-1:exon

position:2937862:-1
position: 2937862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939267:-1
position: 2939267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2936017-2936599:-1:exon

position:2936017:-1
position: 2936017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2936599:-1
position: 2936599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2934985-2935167:-1:exon

position:2934985:-1
position: 2934985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2935167:-1
position: 2935167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2933682-2933788:-1:exon

position:2933682:-1
position: 2933682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2933788:-1
position: 2933788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2931276-2931770:-1:exon

position:2931770:-1
position: 2931770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LATS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LATS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase LATS2
translation: MRPKTFPATTYSGNGRQRLQEIREGLKQPPKPCSQGLPVGPNGDAALGGKDAARQQQQRATPKFGPYQKALREIRYSLLPFANESGTPAAAEVNRQMLQELVSAGCDQEMAGRALKQTGSRSIEAALEYISKMGYLDPRNEQIVRVIKQTSPGKGLVPPPGTVTRRPSFEGAGDGFAPYHPLGSATYEGPAALEEVPRPYVDFLFPGAAPHSMPGPPHPSKGYAAGVEPAGAHFSGAAGPALPLPGTHYSRAHLLVPGEPLAYGVKRSPSFQNKAPPEAGGYPSLTAKGQGGPQGAGLTFPGPGTTLYTPHPHHKQTSPTSHQLHVMGARGQMFPGDSPPQSLLAPSRNSLNSELYELGGSPVQAWPATSLARRDSLQNPGLDAPRPHTSFRPDGPTPSRTNSFNSQQPRAGPTVQAEPSLPAPNTVTAVTAAHILHPVKSVRVLRPEPQTAVGPSHPAWVPGPTPPAESLDTKDEHTLALGSTYPLDLELGSPDRRCLPPPYPKHLLLPGKSEQYDLDGLCAGMEQSLRGGPAAEPADRASKSHKGIKGDKVGKDKKQIQTSPVPVRKNSRDDCEKRESRIKSYSPCAFKFFMEQHVENVIKTYQQKVTRRMQLEQEMAKAGLCEAEQEQMRKILYQKESNYNRLKRAKMDKSMFVKIKTLGVGAFGEVCLACKVDTHALYAMKTLRKKDVLDRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDSLYFVMDYIPGGDMMSLLIRMEVFPEHLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGNHARQDSMEPGDLWDDVSNCRCGDRLKTLEQRARKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPAQAKLSPEARDLITKLCCAADCRLGRDGADDLKAHSFFSTIDFSSDIRKQPAPYVPTISHPMDTSNFDPVDEESPWSEASEGSAKAWDTLTAPNNKHPEHAFYEFTFRRFFDDNGYPFRCPKPPGAEASQSENPDAEHSELGDQTEGCQPVYV
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(2931276..2931770,2933682..2933788,2934985..2935167,2936017..2936599,2937862..2939267,2940866..2940998,2985526..2985849))
location: region:2931276-2985849:-1
so has part: feature:2985526-2985849:-1:exon
so has part: feature:2940866-2940998:-1:exon
so has part: feature:2937862-2939267:-1:exon
so has part: feature:2936017-2936599:-1:exon
so has part: feature:2934985-2935167:-1:exon
so has part: feature:2933682-2933788:-1:exon
so has part: feature:2931276-2931770:-1:exon

XP_004577646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2985526-2985849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2940866-2940998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2937862-2939267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2936017-2936599:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2934985-2935167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2933682-2933788:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2931276-2931770:-1:exon

LOC118758026
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758026
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3011407..3011518)
location: region:3011407-3011518:-1
so has part: feature:3011407-3011518:-1:exon
subclass of: SO_0000623

118758026
type: Gene
SIO_000068: ncbigene

position:3011407:-1
position: 3011407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3011518:-1
position: 3011518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3011407-3011518:-1:exon

LOC118758026
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758026
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995491.1
SIO_010081: LOC118758026
subclass of: SO_0000673
so part of: LOC118758026
location: complement(3011407..3011518)
location: region:3011407-3011518:-1
so has part: feature:3011407-3011518:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3011407-3011518:-1:exon

LOC118758069
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758069
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 3063990..3064073
location: region:3063990-3064073:1
so has part: feature:3063990-3064073:1:exon

118758069
type: Gene
SIO_000068: ncbigene

position:3063990:1
position: 3063990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3064073:1
position: 3064073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3063990-3064073:1:exon

LOC118758069
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118758069
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118758069
subclass of: SO_0000673
so part of: LOC118758069
location: 3063990..3064073
location: region:3063990-3064073:1
so has part: feature:3063990-3064073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3063990-3064073:1:exon

SAP18
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SAP18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3070645..3074682
location: region:3070645-3074682:1
so has part: feature:3070645-3074682:1:exon
subclass of: SO_0000010

101519900
type: Gene
SIO_000068: ncbigene

position:3070645:1
position: 3070645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3074682:1
position: 3074682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3070645-3074682:1:exon

SAP18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SAP18
product: Sin3A associated protein 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004577588.1
SIO_010081: SAP18
subclass of: SO_0000673
so part of: SAP18
location: join(3070645..3070773,3070883..3070992,3073917..3074039,3074292..3074682)
location: region:3070645-3074682:1
so has part: feature:3070645-3070773:1:exon
so has part: feature:3070883-3070992:1:exon
so has part: feature:3073917-3074039:1:exon
so has part: feature:3074292-3074682:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3070645-3070773:1:exon

position:3070773:1
position: 3070773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3070883-3070992:1:exon

position:3070883:1
position: 3070883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3070992:1
position: 3070992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3073917-3074039:1:exon

position:3073917:1
position: 3073917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3074039:1
position: 3074039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3074292-3074682:1:exon

position:3074292:1
position: 3074292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SAP18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SAP18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase complex subunit SAP18
translation: MLAAGVGGQGDRLAGRRRKMAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDIKRPGYRVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPPNRAPPPSGRMRPY
SIO_010081: SAP18
subclass of: SO_0000673
so part of: SAP18
location: join(3070645..3070773,3070883..3070992,3073917..3074039,3074292..3074448)
location: region:3070645-3074448:1
so has part: feature:3070645-3070773:1:exon
so has part: feature:3070883-3070992:1:exon
so has part: feature:3073917-3074039:1:exon
so has part: feature:3074292-3074448:1:exon

XP_004577645.1
type: Protein
SIO_000068: ncbiprotein

position:3074448:1
position: 3074448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3070645-3070773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3070883-3070992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3073917-3074039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3074292-3074448:1:exon

SKA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SKA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3083696..3112094)
location: region:3083696-3112094:-1
so has part: feature:3083696-3112094:-1:exon
subclass of: SO_0000010

101517208
type: Gene
SIO_000068: ncbigene

position:3083696:-1
position: 3083696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3112094:-1
position: 3112094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3083696-3112094:-1:exon

SKA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SKA3
product: spindle and kinetochore associated complex subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_004577710.1
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(3083696..3083821,3086577..3086780,3088913..3088995,3090623..3090702,3095116..3095509,3105624..3105851,3112061..3112094))
location: region:3083696-3112094:-1
so has part: feature:3112061-3112094:-1:exon
so has part: feature:3105624-3105851:-1:exon
so has part: feature:3095116-3095509:-1:exon
so has part: feature:3090623-3090702:-1:exon
so has part: feature:3088913-3088995:-1:exon
so has part: feature:3086577-3086780:-1:exon
so has part: feature:3083696-3083821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3112061-3112094:-1:exon

position:3112061:-1
position: 3112061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3105624-3105851:-1:exon

position:3105624:-1
position: 3105624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3105851:-1
position: 3105851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3095116-3095509:-1:exon

position:3095116:-1
position: 3095116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3095509:-1
position: 3095509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3090623-3090702:-1:exon

position:3090623:-1
position: 3090623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3090702:-1
position: 3090702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3088913-3088995:-1:exon

position:3088913:-1
position: 3088913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3088995:-1
position: 3088995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3086577-3086780:-1:exon

position:3086577:-1
position: 3086577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3086780:-1
position: 3086780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3083696-3083821:-1:exon

position:3083821:-1
position: 3083821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SKA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SKA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindle and kinetochore-associated protein 3
translation: MRQRALYLKPTDFEEYPMRILHDLHSDVQTLKDDVSILLSKTSLENQENIGFLKTVKLLMKKNSADIMKIQEYFQKYGYEPRVKKNSVCEQDGVDSAAELAQQPEDRGAPTEPPSPDTSISEKPARSPQLSDFGLERYMIPHALPKPATAESQHQEEPQATPAARQSAVTVPKTPRCALRMDDFECVTPKLEHFGISEYTMCLNEDYTVGLKNIKNSKREETIETGHTCGDLATPEPIIQQPKNCDADYADSPVVPTFCTPGLKIPMRNSTALMSTNHPTSKANSSSHEVQVTDCSPLVLKSDECFENFSDPSPATISSYENFLRSPTPPEVTTIPEDMFQILTKYNSKLATPIAIKPMPGKKEFLRYEGHNFRDVGHKENW
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(3083696..3083821,3086577..3086780,3088913..3088995,3090623..3090702,3095116..3095509,3105624..3105851,3112061..3112094))
location: region:3083696-3112094:-1
so has part: feature:3112061-3112094:-1:exon
so has part: feature:3105624-3105851:-1:exon
so has part: feature:3095116-3095509:-1:exon
so has part: feature:3090623-3090702:-1:exon
so has part: feature:3088913-3088995:-1:exon
so has part: feature:3086577-3086780:-1:exon
so has part: feature:3083696-3083821:-1:exon

XP_004577767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3112061-3112094:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3105624-3105851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3095116-3095509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3090623-3090702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3088913-3088995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3086577-3086780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3083696-3083821:-1:exon

MRPL57
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: MRPL57
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3100582..3100890
location: region:3100582-3100890:1
so has part: feature:3100582-3100890:1:exon
subclass of: SO_0000010

101519651
type: Gene
SIO_000068: ncbigene

position:3100582:1
position: 3100582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3100890:1
position: 3100890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3100582-3100890:1:exon

MRPL57
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MRPL57
product: mitochondrial ribosomal protein L57
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_004577587.1
SIO_010081: MRPL57
subclass of: SO_0000673
so part of: MRPL57
location: 3100582..3100890
location: region:3100582-3100890:1
so has part: feature:3100582-3100890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3100582-3100890:1:exon

MRPL57
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MRPL57
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein 63, mitochondrial
translation: MFLTGRLLRNRIPGRQWSGKHRRPRPVSAFAKQNMIRRLEIEAENHYWLSRPYLSAEQEHGHAAARRAAAFEAIKAASTSKFPPHRFVAEQLEQLNVTKKWS
SIO_010081: MRPL57
subclass of: SO_0000673
so part of: MRPL57
location: 3100582..3100890
location: region:3100582-3100890:1
so has part: feature:3100582-3100890:1:exon

XP_004577644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3100582-3100890:1:exon

ZDHHC20
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3123073..3232604)
location: region:3123073-3232604:-1
so has part: feature:3123073-3232604:-1:exon
subclass of: SO_0000010

101519229
type: Gene
SIO_000068: ncbigene

position:3123073:-1
position: 3123073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3232604:-1
position: 3232604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3123073-3232604:-1:exon

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012926561.1
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(3123073..3123348,3126137..3126249,3127579..3127668,3131634..3131760,3139531..3139663,3147666..3147786,3148396..3148428,3149561..3149630,3159811..3159931,3165029..3165132,3169422..3169448,3232487..3232604))
location: region:3123073-3232604:-1
so has part: feature:3232487-3232604:-1:exon
so has part: feature:3169422-3169448:-1:exon
so has part: feature:3165029-3165132:-1:exon
so has part: feature:3159811-3159931:-1:exon
so has part: feature:3149561-3149630:-1:exon
so has part: feature:3148396-3148428:-1:exon
so has part: feature:3147666-3147786:-1:exon
so has part: feature:3139531-3139663:-1:exon
so has part: feature:3131634-3131760:-1:exon
so has part: feature:3127579-3127668:-1:exon
so has part: feature:3126137-3126249:-1:exon
so has part: feature:3123073-3123348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3232487-3232604:-1:exon

position:3232487:-1
position: 3232487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3169422-3169448:-1:exon

position:3169422:-1
position: 3169422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3169448:-1
position: 3169448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3165029-3165132:-1:exon

position:3165029:-1
position: 3165029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3165132:-1
position: 3165132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3159811-3159931:-1:exon

position:3159811:-1
position: 3159811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3159931:-1
position: 3159931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3149561-3149630:-1:exon

position:3149561:-1
position: 3149561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3149630:-1
position: 3149630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3148396-3148428:-1:exon

position:3148396:-1
position: 3148396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3148428:-1
position: 3148428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3147666-3147786:-1:exon

position:3147666:-1
position: 3147666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3147786:-1
position: 3147786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3139531-3139663:-1:exon

position:3139531:-1
position: 3139531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3139663:-1
position: 3139663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3131634-3131760:-1:exon

position:3131634:-1
position: 3131634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3131760:-1
position: 3131760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3127579-3127668:-1:exon

position:3127579:-1
position: 3127579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3127668:-1
position: 3127668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3126137-3126249:-1:exon

position:3126137:-1
position: 3126137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3126249:-1
position: 3126249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3123073-3123348:-1:exon

position:3123348:-1
position: 3123348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20
translation: MAPLTFWRGCQRVVGWVPVLFITFVVVWSYYAYVVELCVCTIFGNEENGKTVVYLVAFHLFFVMFVWSYWMTIFTSPATPSNEFYLSNAEKERYEKEFSQERQQEILRRVARDLPIYTTSASRAIRYCEKCQLIKPDRAHHCSACDTCILKMDHHCPWVNNCVGFSNYKFFMLFLFYSLLYCLFVATTVLEYFIKFWTSEPTGTRAKFHVLFLFFVSAMFFISVLSLFSYHCWLVGKNRTTIESFRAPTFSYGPDANGFSLGYSKNWRQVFGDEKKYWLLPVFSSLGDGCSFPTRLVGMDPEQASVANQDDFPRSIGSNQHFPIKPLSESKNRLLDTESQWLENGAEECVRAGI
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(3123341..3123348,3126137..3126249,3127579..3127668,3131634..3131760,3139531..3139663,3147666..3147786,3148396..3148428,3149561..3149630,3159811..3159931,3165029..3165132,3169422..3169448,3232487..3232604))
location: region:3123341-3232604:-1
so has part: feature:3232487-3232604:-1:exon
so has part: feature:3169422-3169448:-1:exon
so has part: feature:3165029-3165132:-1:exon
so has part: feature:3159811-3159931:-1:exon
so has part: feature:3149561-3149630:-1:exon
so has part: feature:3148396-3148428:-1:exon
so has part: feature:3147666-3147786:-1:exon
so has part: feature:3139531-3139663:-1:exon
so has part: feature:3131634-3131760:-1:exon
so has part: feature:3127579-3127668:-1:exon
so has part: feature:3126137-3126249:-1:exon
so has part: feature:3123341-3123348:-1:exon

XP_012782015.1
type: Protein
SIO_000068: ncbiprotein

position:3123341:-1
position: 3123341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3232487-3232604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3169422-3169448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3165029-3165132:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3159811-3159931:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3149561-3149630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3148396-3148428:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3147666-3147786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3139531-3139663:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3131634-3131760:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3127579-3127668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3126137-3126249:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3123341-3123348:-1:exon

LOC101518983
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101518983
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3191045..3191634
location: region:3191045-3191634:1
so has part: feature:3191045-3191634:1:exon
subclass of: SO_0000010

101518983
type: Gene
SIO_000068: ncbigene

position:3191045:1
position: 3191045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3191634:1
position: 3191634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3191045-3191634:1:exon

LOC101518983
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101518983
product: anaphase-promoting complex subunit 10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_004577584.3
SIO_010081: LOC101518983
subclass of: SO_0000673
so part of: LOC101518983
location: join(3191045..3191370,3191403..3191634)
location: region:3191045-3191634:1
so has part: feature:3191045-3191370:1:exon
so has part: feature:3191403-3191634:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3191045-3191370:1:exon

position:3191370:1
position: 3191370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3191403-3191634:1:exon

position:3191403:1
position: 3191403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101518983
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101518983
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anaphase-promoting complex subunit 10-like
translation: MTTPNKTPPGADPKQLERTGTVQEIGSQAVWSFSSCKPGFGVDQLGDDNLETYWQSAGSQPHSVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRAGNNFHNLQEIRQLELVDPSGWTHVPLTDNHKKPTRMFMIQIAILANHQDGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR
SIO_010081: LOC101518983
subclass of: SO_0000673
so part of: LOC101518983
location: join(3191045..3191370,3191403..3191634)
location: region:3191045-3191634:1
so has part: feature:3191045-3191370:1:exon
so has part: feature:3191403-3191634:1:exon

XP_004577641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3191045-3191370:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3191403-3191634:1:exon

MICU2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: MICU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3268719..3330334)
location: region:3268719-3330334:-1
so has part: feature:3268719-3330334:-1:exon
subclass of: SO_0000010

101516961
type: Gene
SIO_000068: ncbigene

position:3268719:-1
position: 3268719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3330334:-1
position: 3330334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3268719-3330334:-1:exon

MICU2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MICU2
product: mitochondrial calcium uptake 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012926747.1
SIO_010081: MICU2
subclass of: SO_0000673
so part of: MICU2
location: complement(join(3268719..3269413,3270970..3271094,3271843..3271951,3274429..3274600,3281607..3281704,3285569..3285634,3302874..3302956,3304209..3304256,3312371..3312512,3330269..3330334))
location: region:3268719-3330334:-1
so has part: feature:3330269-3330334:-1:exon
so has part: feature:3312371-3312512:-1:exon
so has part: feature:3304209-3304256:-1:exon
so has part: feature:3302874-3302956:-1:exon
so has part: feature:3285569-3285634:-1:exon
so has part: feature:3281607-3281704:-1:exon
so has part: feature:3274429-3274600:-1:exon
so has part: feature:3271843-3271951:-1:exon
so has part: feature:3270970-3271094:-1:exon
so has part: feature:3268719-3269413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3330269-3330334:-1:exon

position:3330269:-1
position: 3330269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3312371-3312512:-1:exon

position:3312371:-1
position: 3312371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3312512:-1
position: 3312512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3304209-3304256:-1:exon

position:3304209:-1
position: 3304209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3304256:-1
position: 3304256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3302874-3302956:-1:exon

position:3302874:-1
position: 3302874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3302956:-1
position: 3302956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3285569-3285634:-1:exon

position:3285569:-1
position: 3285569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3285634:-1
position: 3285634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3281607-3281704:-1:exon

position:3281607:-1
position: 3281607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3281704:-1
position: 3281704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3274429-3274600:-1:exon

position:3274429:-1
position: 3274429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3274600:-1
position: 3274600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3271843-3271951:-1:exon

position:3271843:-1
position: 3271843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3271951:-1
position: 3271951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3270970-3271094:-1:exon

position:3270970:-1
position: 3270970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3271094:-1
position: 3271094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3268719-3269413:-1:exon

position:3269413:-1
position: 3269413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MICU2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MICU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium uptake protein 2, mitochondrial
translation: MVRSGTERERTRAVRNGFRSREKNVDYGATEKPSLRKQRFMQFSSLEHEGEYYMTPRDFLFSVMFEEMERLISYTEYLFLLTILTKPHSGFHVAFKMLDADGNEMIEKKEFFKLQKIISKQEDLKTMKMNDTKCQESIVKESEINTTLEIRFFGKKGEKKLHYQEFRRFMENLQTEIQEMEFLQFSKGLSFMRKEDFAEWLLFFTNTENKDIYWKNVREKLSAGESISLDEFKSFCHFATHLEDFAIAMQMFSLAHRPVRLAEFKRAVKVATGQELSNNLLDTVFKIFDLDGDECLSHGEFLGVHKIMPSFLLFVNRCHINKAFKNTGNV
SIO_010081: MICU2
subclass of: SO_0000673
so part of: MICU2
location: complement(join(3269330..3269413,3270970..3271094,3271843..3271951,3274429..3274600,3281607..3281704,3285569..3285634,3302874..3302956,3304209..3304256,3312371..3312512,3330269..3330334))
location: region:3269330-3330334:-1
so has part: feature:3330269-3330334:-1:exon
so has part: feature:3312371-3312512:-1:exon
so has part: feature:3304209-3304256:-1:exon
so has part: feature:3302874-3302956:-1:exon
so has part: feature:3285569-3285634:-1:exon
so has part: feature:3281607-3281704:-1:exon
so has part: feature:3274429-3274600:-1:exon
so has part: feature:3271843-3271951:-1:exon
so has part: feature:3270970-3271094:-1:exon
so has part: feature:3269330-3269413:-1:exon

XP_012782201.1
type: Protein
SIO_000068: ncbiprotein

position:3269330:-1
position: 3269330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3330269-3330334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3312371-3312512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3304209-3304256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3302874-3302956:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3285569-3285634:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3281607-3281704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3274429-3274600:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271843-3271951:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3270970-3271094:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3269330-3269413:-1:exon

FGF9
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: FGF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3445370..3485496
location: region:3445370-3485496:1
so has part: feature:3445370-3485496:1:exon
subclass of: SO_0000010

101518744
type: Gene
SIO_000068: ncbigene

position:3445370:1
position: 3445370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3485496:1
position: 3485496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3445370-3485496:1:exon

FGF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: FGF9
product: fibroblast growth factor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 12 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577583.2
SIO_010081: FGF9
subclass of: SO_0000673
so part of: FGF9
location: join(3445370..3446459,3454517..3454620,3484655..3485496)
location: region:3445370-3485496:1
so has part: feature:3445370-3446459:1:exon
so has part: feature:3454517-3454620:1:exon
so has part: feature:3484655-3485496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3445370-3446459:1:exon

position:3446459:1
position: 3446459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3454517-3454620:1:exon

position:3454517:1
position: 3454517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3454620:1
position: 3454620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3484655-3485496:1:exon

position:3484655:1
position: 3484655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: FGF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 9
translation: MAPLGEVGNYFGVQDAVPFGNVPVLPVDSPVLLSDHLGQSEAGGLPRGPAVTDLDHLKGILRRRQLYCRTGFHLEIFPNGTIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGSPREGTRTKRHQKFTHFLPRPVDPDKVPELYKDILNQS
SIO_010081: FGF9
subclass of: SO_0000673
so part of: FGF9
location: join(3446183..3446459,3454517..3454620,3484655..3484900)
location: region:3446183-3484900:1
so has part: feature:3446183-3446459:1:exon
so has part: feature:3454517-3454620:1:exon
so has part: feature:3484655-3484900:1:exon

XP_004577640.1
type: Protein
SIO_000068: ncbiprotein

position:3446183:1
position: 3446183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3484900:1
position: 3484900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3446183-3446459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3454517-3454620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3484655-3484900:1:exon

LOC105941881
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105941881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3511109..3511958
location: region:3511109-3511958:1
so has part: feature:3511109-3511958:1:exon
subclass of: SO_0000011

105941881
type: Gene
SIO_000068: ncbigene

position:3511109:1
position: 3511109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3511958:1
position: 3511958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3511109-3511958:1:exon

LOC105941881
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: lncRNA
gene: LOC105941881
product: uncharacterized LOC105941881
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001168228.1
SIO_010081: LOC105941881
subclass of: SO_0000673
so part of: LOC105941881
location: join(3511109..3511340,3511820..3511958)
location: region:3511109-3511958:1
so has part: feature:3511109-3511340:1:exon
so has part: feature:3511820-3511958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3511109-3511340:1:exon

position:3511340:1
position: 3511340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3511820-3511958:1:exon

position:3511820:1
position: 3511820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118758019
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758019
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3602762..3602865)
location: region:3602762-3602865:-1
so has part: feature:3602762-3602865:-1:exon
subclass of: SO_0000623

118758019
type: Gene
SIO_000068: ncbigene

position:3602762:-1
position: 3602762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3602865:-1
position: 3602865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3602762-3602865:-1:exon

LOC118758019
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758019
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995486.1
SIO_010081: LOC118758019
subclass of: SO_0000673
so part of: LOC118758019
location: complement(3602762..3602865)
location: region:3602762-3602865:-1
so has part: feature:3602762-3602865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3602762-3602865:-1:exon

LOC118758029
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758029
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 4342977..4343070
location: region:4342977-4343070:1
so has part: feature:4342977-4343070:1:exon

118758029
type: Gene
SIO_000068: ncbigene

position:4342977:1
position: 4342977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4343070:1
position: 4343070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4342977-4343070:1:exon

LOC118758029
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118758029
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118758029
subclass of: SO_0000673
so part of: LOC118758029
location: 4342977..4343070
location: region:4342977-4343070:1
so has part: feature:4342977-4343070:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4342977-4343070:1:exon

LOC105941861
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105941861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4733426..4743263)
location: region:4733426-4743263:-1
so has part: feature:4733426-4743263:-1:exon
subclass of: SO_0000011

105941861
type: Gene
SIO_000068: ncbigene

position:4733426:-1
position: 4733426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4743263:-1
position: 4743263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4733426-4743263:-1:exon

LOC105941861
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: lncRNA
gene: LOC105941861
product: uncharacterized LOC105941861
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001168212.1
SIO_010081: LOC105941861
subclass of: SO_0000673
so part of: LOC105941861
location: complement(join(4733426..4733645,4734299..4734362,4743026..4743263))
location: region:4733426-4743263:-1
so has part: feature:4743026-4743263:-1:exon
so has part: feature:4734299-4734362:-1:exon
so has part: feature:4733426-4733645:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4743026-4743263:-1:exon

position:4743026:-1
position: 4743026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4734299-4734362:-1:exon

position:4734299:-1
position: 4734299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4734362:-1
position: 4734362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4733426-4733645:-1:exon

position:4733645:-1
position: 4733645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SGCG
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4743312..4785385
location: region:4743312-4785385:1
so has part: feature:4743312-4785385:1:exon
subclass of: SO_0000010

101518506
type: Gene
SIO_000068: ncbigene

position:4743312:1
position: 4743312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4785385:1
position: 4785385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4743312-4785385:1:exon

SGCG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SGCG
product: sarcoglycan gamma, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_004577582.2
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(4743312..4743419,4757810..4758004,4762178..4762279,4765622..4765709,4772797..4772916,4776384..4776456,4783932..4784055,4784824..4785385)
location: region:4743312-4785385:1
so has part: feature:4743312-4743419:1:exon
so has part: feature:4757810-4758004:1:exon
so has part: feature:4762178-4762279:1:exon
so has part: feature:4765622-4765709:1:exon
so has part: feature:4772797-4772916:1:exon
so has part: feature:4776384-4776456:1:exon
so has part: feature:4783932-4784055:1:exon
so has part: feature:4784824-4785385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4743312-4743419:1:exon

position:4743419:1
position: 4743419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4757810-4758004:1:exon

position:4757810:1
position: 4757810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4758004:1
position: 4758004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4762178-4762279:1:exon

position:4762178:1
position: 4762178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4762279:1
position: 4762279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4765622-4765709:1:exon

position:4765622:1
position: 4765622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4765709:1
position: 4765709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4772797-4772916:1:exon

position:4772797:1
position: 4772797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4772916:1
position: 4772916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4776384-4776456:1:exon

position:4776384:1
position: 4776384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4776456:1
position: 4776456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4783932-4784055:1:exon

position:4783932:1
position: 4783932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4784055:1
position: 4784055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4784824-4785385:1:exon

position:4784824:1
position: 4784824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SGCG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan isoform X1
translation: MVPRLGKATEMAREQYLTAAEGIHIERPENQHVYKIGIYGWRKRCLYLFVLLLLIILVVNLALTIWILKVMWFSPTGMGRLRVTEDGLHLEGESEFLFPLYAKEIRSRVDSSLLLQSTQNVTVNARNSEGEVTGRLTVGPKMVEVQSQQFEINSKEDNPLFTVDEKQVVVGTGRLRVTGPGGALFEHSVETPLVRTDPLQDLRLESPTRSLSMDAPRGVHIEARAGQVQALSQMDIVLQSSDGTLVLDAETVCLPRLVQGTRDPPGSSQGLYEICVCPDGKLYLAVAGTGTMCREHSRICL
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(4743390..4743419,4757810..4758004,4762178..4762279,4765622..4765709,4772797..4772916,4776384..4776456,4783932..4784055,4784824..4784997)
location: region:4743390-4784997:1
so has part: feature:4743390-4743419:1:exon
so has part: feature:4757810-4758004:1:exon
so has part: feature:4762178-4762279:1:exon
so has part: feature:4765622-4765709:1:exon
so has part: feature:4772797-4772916:1:exon
so has part: feature:4776384-4776456:1:exon
so has part: feature:4783932-4784055:1:exon
so has part: feature:4784824-4784997:1:exon

XP_004577639.2
type: Protein
SIO_000068: ncbiprotein

position:4743390:1
position: 4743390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4784997:1
position: 4784997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4743390-4743419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4757810-4758004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4762178-4762279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4765622-4765709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4772797-4772916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4776384-4776456:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4783932-4784055:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4784824-4784997:1:exon

SGCG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SGCG
product: sarcoglycan gamma, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036493414.1
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(4745328..4745429,4757807..4758004,4762178..4762279,4765622..4765709,4772797..4772916,4776384..4776456,4783932..4784055,4784824..4785385)
location: region:4745328-4785385:1
so has part: feature:4745328-4745429:1:exon
so has part: feature:4757807-4758004:1:exon
so has part: feature:4762178-4762279:1:exon
so has part: feature:4765622-4765709:1:exon
so has part: feature:4772797-4772916:1:exon
so has part: feature:4776384-4776456:1:exon
so has part: feature:4783932-4784055:1:exon
so has part: feature:4784824-4785385:1:exon

position:4745328:1
position: 4745328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4745328-4745429:1:exon

position:4745429:1
position: 4745429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4757807-4758004:1:exon

position:4757807:1
position: 4757807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4762178-4762279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4765622-4765709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4772797-4772916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4776384-4776456:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4783932-4784055:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4784824-4785385:1:exon

SGCG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SGCG
product: sarcoglycan gamma, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_012927035.1
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(4745332..4745429,4757810..4758004,4762178..4762279,4765622..4765709,4772797..4772916,4776384..4776456,4783932..4784055,4784824..4785385)
location: region:4745332-4785385:1
so has part: feature:4745332-4745429:1:exon
so has part: feature:4757810-4758004:1:exon
so has part: feature:4762178-4762279:1:exon
so has part: feature:4765622-4765709:1:exon
so has part: feature:4772797-4772916:1:exon
so has part: feature:4776384-4776456:1:exon
so has part: feature:4783932-4784055:1:exon
so has part: feature:4784824-4785385:1:exon

position:4745332:1
position: 4745332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4745332-4745429:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4757810-4758004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4762178-4762279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4765622-4765709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4772797-4772916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4776384-4776456:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4783932-4784055:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4784824-4785385:1:exon

LOC118758008
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758008
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4756689..4757268)
location: region:4756689-4757268:-1
so has part: feature:4756689-4757268:-1:exon

118758008
type: Gene
SIO_000068: ncbigene

position:4756689:-1
position: 4756689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4757268:-1
position: 4757268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4756689-4757268:-1:exon

LOC118758008
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118758008
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC118758008
subclass of: SO_0000673
so part of: LOC118758008
location: complement(4756689..4757036)
location: region:4756689-4757036:-1
so has part: feature:4756689-4757036:-1:exon

position:4757036:-1
position: 4757036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4756689-4757036:-1:exon

LOC118758008
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC118758008
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC118758008
subclass of: SO_0000673
so part of: LOC118758008
location: complement(4757234..4757268)
location: region:4757234-4757268:-1
so has part: feature:4757234-4757268:-1:exon

position:4757234:-1
position: 4757234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4757234-4757268:-1:exon

SGCG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan isoform X2
translation: MAREQYLTAAEGIHIERPENQHVYKIGIYGWRKRCLYLFVLLLLIILVVNLALTIWILKVMWFSPTGMGRLRVTEDGLHLEGESEFLFPLYAKEIRSRVDSSLLLQSTQNVTVNARNSEGEVTGRLTVGPKMVEVQSQQFEINSKEDNPLFTVDEKQVVVGTGRLRVTGPGGALFEHSVETPLVRTDPLQDLRLESPTRSLSMDAPRGVHIEARAGQVQALSQMDIVLQSSDGTLVLDAETVCLPRLVQGTRDPPGSSQGLYEICVCPDGKLYLAVAGTGTMCREHSRICL
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(4757810..4758004,4762178..4762279,4765622..4765709,4772797..4772916,4776384..4776456,4783932..4784055,4784824..4784997)
location: region:4757810-4784997:1
so has part: feature:4757810-4758004:1:exon
so has part: feature:4762178-4762279:1:exon
so has part: feature:4765622-4765709:1:exon
so has part: feature:4772797-4772916:1:exon
so has part: feature:4776384-4776456:1:exon
so has part: feature:4783932-4784055:1:exon
so has part: feature:4784824-4784997:1:exon

XP_036349307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4757810-4758004:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4762178-4762279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4765622-4765709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4772797-4772916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4776384-4776456:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4783932-4784055:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4784824-4784997:1:exon

SGCG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan isoform X2
translation: MAREQYLTAAEGIHIERPENQHVYKIGIYGWRKRCLYLFVLLLLIILVVNLALTIWILKVMWFSPTGMGRLRVTEDGLHLEGESEFLFPLYAKEIRSRVDSSLLLQSTQNVTVNARNSEGEVTGRLTVGPKMVEVQSQQFEINSKEDNPLFTVDEKQVVVGTGRLRVTGPGGALFEHSVETPLVRTDPLQDLRLESPTRSLSMDAPRGVHIEARAGQVQALSQMDIVLQSSDGTLVLDAETVCLPRLVQGTRDPPGSSQGLYEICVCPDGKLYLAVAGTGTMCREHSRICL
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(4757810..4758004,4762178..4762279,4765622..4765709,4772797..4772916,4776384..4776456,4783932..4784055,4784824..4784997)
location: region:4757810-4784997:1
so has part: feature:4757810-4758004:1:exon
so has part: feature:4762178-4762279:1:exon
so has part: feature:4765622-4765709:1:exon
so has part: feature:4772797-4772916:1:exon
so has part: feature:4776384-4776456:1:exon
so has part: feature:4783932-4784055:1:exon
so has part: feature:4784824-4784997:1:exon

XP_012782489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4757810-4758004:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4762178-4762279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4765622-4765709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4772797-4772916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4776384-4776456:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4783932-4784055:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4784824-4784997:1:exon

SACS
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SACS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4790840..4843589)
location: region:4790840-4843589:-1
so has part: feature:4790840-4843589:-1:exon
subclass of: SO_0000010

101518111
type: Gene
SIO_000068: ncbigene

position:4790840:-1
position: 4790840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4843589:-1
position: 4843589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4790840-4843589:-1:exon

SACS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SACS
product: sacsin molecular chaperone, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 2 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577580.2
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(4790840..4803687,4823355..4823446,4824372..4825860,4828147..4828293,4832271..4832382,4835407..4835492,4843445..4843589))
location: region:4790840-4843589:-1
so has part: feature:4843445-4843589:-1:exon
so has part: feature:4835407-4835492:-1:exon
so has part: feature:4832271-4832382:-1:exon
so has part: feature:4828147-4828293:-1:exon
so has part: feature:4824372-4825860:-1:exon
so has part: feature:4823355-4823446:-1:exon
so has part: feature:4790840-4803687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4843445-4843589:-1:exon

position:4843445:-1
position: 4843445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4835407-4835492:-1:exon

position:4835407:-1
position: 4835407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4835492:-1
position: 4835492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4832271-4832382:-1:exon

position:4832271:-1
position: 4832271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4832382:-1
position: 4832382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4828147-4828293:-1:exon

position:4828147:-1
position: 4828147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4828293:-1
position: 4828293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4824372-4825860:-1:exon

position:4824372:-1
position: 4824372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4825860:-1
position: 4825860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4823355-4823446:-1:exon

position:4823355:-1
position: 4823355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4823446:-1
position: 4823446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4790840-4803687:-1:exon

position:4803687:-1
position: 4803687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SACS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SACS
product: sacsin molecular chaperone, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 6 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577581.3
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(4790840..4803687,4823355..4823446,4824372..4825860,4828147..4828293,4832271..4832382,4835407..4835492,4837014..4837101,4843445..4843589))
location: region:4790840-4843589:-1
so has part: feature:4843445-4843589:-1:exon
so has part: feature:4837014-4837101:-1:exon
so has part: feature:4835407-4835492:-1:exon
so has part: feature:4832271-4832382:-1:exon
so has part: feature:4828147-4828293:-1:exon
so has part: feature:4824372-4825860:-1:exon
so has part: feature:4823355-4823446:-1:exon
so has part: feature:4790840-4803687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4843445-4843589:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4837014-4837101:-1:exon

position:4837014:-1
position: 4837014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4837101:-1
position: 4837101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4835407-4835492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4832271-4832382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4828147-4828293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4824372-4825860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4823355-4823446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4790840-4803687:-1:exon

SACS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SACS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sacsin
translation: MAPYQGPALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPQESGQCWNLKDDSKEMSELSDQFAPFIGIFGSTKETFINGSFPGTFFRFPLRLEPSQLSGNLYNKQKVLELFDSFKADADTVLLFLKSVQDVSLYVREADGTEKLVFRVTASENKALQHERPNSIKILESAISNYCKKIPSNSITCVTYHINIVLEDESAKDAQKTAWLVCNSVGGRGISSKLDSLADELKFVPIIGIAVSLASTDDEDKGAMSEFSGKAFCFLPLPPGEESRTGLPVHISGFFGLTDNRRSIKWRELDQWRDPAALWNELLVVNVVPKAYATLILDSIKRLETEKTSDFPLSVGTIYKLWPEASKIKVHWQPVLGPLFSELFQNAVIYTISHEWVKLEQAYFSELDDSLEYTKAVLNYLQSSGKHIAQVPANLLAAVELAAGPGVTPTRKVTPAWVRQVLRKAAHVGSAEDKLLLLEFVLSDQAYSDLLGLELLPLQNGNFVPFSSSVSDQDVIYITSEEYPRPLFPGLEGRFLLDNLKPHLLAALKEAAQTRGRPCTQLQLLNPERFARLIKEVTNGLWPGRELIVQWYPSDEDRNHPPVSWLKMVWKNLYIHFSEDLTGFDEMPLIPRTALEEGQTRVELIRLRIPSVVMLDDDSEAQLPEFLADIVHKLGGIVLKKLDSSIQHPLIKKYIHSPLPSAILQIMEKMPLQKLCNQIASLLPTHKDALRKFLASLCDSSEKEKRIIQELTIFKRINHSPGQGVSSYTKLKGCKVLHHTAKLPPDLRLSIAVIDSSDEATIRLANMLKVEKLKTTSCLKLVLKDIENAFYSNEEVTHLMLWILDNLSSLKNESPSVLDWLMPVRFIPISQGRAVSASELFDPDIAVLKDLFYNEEEICFPPSDFTSPDILHALRQIGLKNEASLKEEDVVQVAKHIEALQASSCPDQEFLLKKAKTLLQVLNKNPALLQSPEGKVTLKKIKWVPACKERPPNYPGSLVWKGDACHLCAPPDMCDVTHAILVGSSLPLVESIHVNLEKALGIFTKPSISAVLKHFKTVVDWYSSNTFSDKDYYQFQHILLEVYGFMHDHLNEGKESFRALKFPWVWTGKKFCPLAQAVIKPTHDLDLQPYLHNVPKTMAKFHQLFKVCGSIEELTSDHISMVIQKVYLRSDQDLSEQESKQNLHLMLNIIRWLYSNQIPASPNTPVPVHHSKNPSKLIMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDADATECSFLIDMRRNMDIRESLLDPGMAACHGPALWSFNNSEFSDSDFVNITRLGESLKRAEVDKVGKFGLGFNSVYHLTDIPIIMSREFMIMFDPNINHISKHIKDKSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYHGTLFRLSFRTQQEAKVSEISSTCYNTADIYSLVDEFSLCGHRLIIFTQSVNSMYLKYLKIEEANPSLAQDTVVIKKKVCSSKALTAPVLSILKEAAKLMKTCSSSNKKPVAEPPKASCLLQITVEEFHHVFRRIADLQSPLFRGPEDDPASLFEMAKSGQSKKPSDELPQKTVECTTWLLSSCMDTGEALKFSLSESGRRLGLVPCGAVGVLLSEMQDQKWTVKPHVGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEIWKTDTKGRWNSTFMRHVIVKAYLQALSVLRDMATSGELSDYTYYAVWPDPDSVHDDFSVICQGFYEDIAHGKGKELTRVFSDGSAWVSMKNVRFLDDSILKRRDVGPAAFKIFLKYLKKTGSKNLCAVELPSSVKLGFEEAGCRQILLENTFSEQQFFSEVFFPNIQEIEAELRDPLMNYVLNEKIDEFSGILRVTPCIPCSVEGHPLVVPSRLIHPEGRVAKLFDTKDGRFPYGSTQDYLNPIILIK…
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(4792130..4803687,4823355..4823446,4824372..4825860,4828147..4828293,4832271..4832286))
location: region:4792130-4832286:-1
so has part: feature:4832271-4832286:-1:exon
so has part: feature:4828147-4828293:-1:exon
so has part: feature:4824372-4825860:-1:exon
so has part: feature:4823355-4823446:-1:exon
so has part: feature:4792130-4803687:-1:exon

XP_004577637.1
type: Protein
SIO_000068: ncbiprotein

position:4792130:-1
position: 4792130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4832286:-1
position: 4832286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4832271-4832286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4828147-4828293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4824372-4825860:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4823355-4823446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4792130-4803687:-1:exon

SACS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SACS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sacsin
translation: MAPYQGPALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPQESGQCWNLKDDSKEMSELSDQFAPFIGIFGSTKETFINGSFPGTFFRFPLRLEPSQLSGNLYNKQKVLELFDSFKADADTVLLFLKSVQDVSLYVREADGTEKLVFRVTASENKALQHERPNSIKILESAISNYCKKIPSNSITCVTYHINIVLEDESAKDAQKTAWLVCNSVGGRGISSKLDSLADELKFVPIIGIAVSLASTDDEDKGAMSEFSGKAFCFLPLPPGEESRTGLPVHISGFFGLTDNRRSIKWRELDQWRDPAALWNELLVVNVVPKAYATLILDSIKRLETEKTSDFPLSVGTIYKLWPEASKIKVHWQPVLGPLFSELFQNAVIYTISHEWVKLEQAYFSELDDSLEYTKAVLNYLQSSGKHIAQVPANLLAAVELAAGPGVTPTRKVTPAWVRQVLRKAAHVGSAEDKLLLLEFVLSDQAYSDLLGLELLPLQNGNFVPFSSSVSDQDVIYITSEEYPRPLFPGLEGRFLLDNLKPHLLAALKEAAQTRGRPCTQLQLLNPERFARLIKEVTNGLWPGRELIVQWYPSDEDRNHPPVSWLKMVWKNLYIHFSEDLTGFDEMPLIPRTALEEGQTRVELIRLRIPSVVMLDDDSEAQLPEFLADIVHKLGGIVLKKLDSSIQHPLIKKYIHSPLPSAILQIMEKMPLQKLCNQIASLLPTHKDALRKFLASLCDSSEKEKRIIQELTIFKRINHSPGQGVSSYTKLKGCKVLHHTAKLPPDLRLSIAVIDSSDEATIRLANMLKVEKLKTTSCLKLVLKDIENAFYSNEEVTHLMLWILDNLSSLKNESPSVLDWLMPVRFIPISQGRAVSASELFDPDIAVLKDLFYNEEEICFPPSDFTSPDILHALRQIGLKNEASLKEEDVVQVAKHIEALQASSCPDQEFLLKKAKTLLQVLNKNPALLQSPEGKVTLKKIKWVPACKERPPNYPGSLVWKGDACHLCAPPDMCDVTHAILVGSSLPLVESIHVNLEKALGIFTKPSISAVLKHFKTVVDWYSSNTFSDKDYYQFQHILLEVYGFMHDHLNEGKESFRALKFPWVWTGKKFCPLAQAVIKPTHDLDLQPYLHNVPKTMAKFHQLFKVCGSIEELTSDHISMVIQKVYLRSDQDLSEQESKQNLHLMLNIIRWLYSNQIPASPNTPVPVHHSKNPSKLIMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDADATECSFLIDMRRNMDIRESLLDPGMAACHGPALWSFNNSEFSDSDFVNITRLGESLKRAEVDKVGKFGLGFNSVYHLTDIPIIMSREFMIMFDPNINHISKHIKDKSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYHGTLFRLSFRTQQEAKVSEISSTCYNTADIYSLVDEFSLCGHRLIIFTQSVNSMYLKYLKIEEANPSLAQDTVVIKKKVCSSKALTAPVLSILKEAAKLMKTCSSSNKKPVAEPPKASCLLQITVEEFHHVFRRIADLQSPLFRGPEDDPASLFEMAKSGQSKKPSDELPQKTVECTTWLLSSCMDTGEALKFSLSESGRRLGLVPCGAVGVLLSEMQDQKWTVKPHVGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEIWKTDTKGRWNSTFMRHVIVKAYLQALSVLRDMATSGELSDYTYYAVWPDPDSVHDDFSVICQGFYEDIAHGKGKELTRVFSDGSAWVSMKNVRFLDDSILKRRDVGPAAFKIFLKYLKKTGSKNLCAVELPSSVKLGFEEAGCRQILLENTFSEQQFFSEVFFPNIQEIEAELRDPLMNYVLNEKIDEFSGILRVTPCIPCSVEGHPLVVPSRLIHPEGRVAKLFDTKDGRFPYGSTQDYLNPIILIK…
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(4792130..4803687,4823355..4823446,4824372..4825860,4828147..4828293,4832271..4832286))
location: region:4792130-4832286:-1
so has part: feature:4832271-4832286:-1:exon
so has part: feature:4828147-4828293:-1:exon
so has part: feature:4824372-4825860:-1:exon
so has part: feature:4823355-4823446:-1:exon
so has part: feature:4792130-4803687:-1:exon

XP_004577638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4832271-4832286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4828147-4828293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4824372-4825860:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4823355-4823446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4792130-4803687:-1:exon

TNFRSF19
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5025240..5103546
location: region:5025240-5103546:1
so has part: feature:5025240-5103546:1:exon
subclass of: SO_0000010

101516233
type: Gene
SIO_000068: ncbigene

position:5025240:1
position: 5025240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5103546:1
position: 5103546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5025240-5103546:1:exon

TNFRSF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: TNFRSF19
product: TNF receptor superfamily member 19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 10 Proteins
transcript id: XM_012926745.1
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(5025240..5025308,5027116..5027226,5042496..5042674,5052777..5052862,5080961..5081125,5082522..5082647,5089861..5089963,5091121..5091514,5103538..5103546)
location: region:5025240-5103546:1
so has part: feature:5025240-5025308:1:exon
so has part: feature:5027116-5027226:1:exon
so has part: feature:5042496-5042674:1:exon
so has part: feature:5052777-5052862:1:exon
so has part: feature:5080961-5081125:1:exon
so has part: feature:5082522-5082647:1:exon
so has part: feature:5089861-5089963:1:exon
so has part: feature:5091121-5091514:1:exon
so has part: feature:5103538-5103546:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5025240-5025308:1:exon

position:5025308:1
position: 5025308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5027116-5027226:1:exon

position:5027116:1
position: 5027116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5027226:1
position: 5027226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5042496-5042674:1:exon

position:5042496:1
position: 5042496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5042674:1
position: 5042674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5052777-5052862:1:exon

position:5052777:1
position: 5052777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5052862:1
position: 5052862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5080961-5081125:1:exon

position:5080961:1
position: 5080961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5081125:1
position: 5081125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5082522-5082647:1:exon

position:5082522:1
position: 5082522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5082647:1
position: 5082647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5089861-5089963:1:exon

position:5089861:1
position: 5089861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5089963:1
position: 5089963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5091121-5091514:1:exon

position:5091121:1
position: 5091121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5091514:1
position: 5091514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5103538-5103546:1:exon

position:5103538:1
position: 5103538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNFRSF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19
translation: MATRILPEQETTLLTVVVLLGCLLCTAVCETGDCRQQEFRDRSGNCVLCKQCGPGMELSKECGFGYGEDAQCVTCRPHRFKEDWGFQKCKPCLDCALVNRFQKANCSVTSDAICGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCTSKVNLVKIASTASSPRDTALAAIICSALATVLLALLILCVIYCKRQFMEKKPSWSLRSQDVQYNGSELSRFDRSRLSPCAHRACTQCLQAARQPYGPVHLIPSLCCEEACGANRAALACGMHSTATLQERNAGPAGETMPAFFGSPSLSVCGEFSDAWPLMQDPTAGDGISFAGSYPELAGEDLPSLSPENESSVSLDSNSSQDWVGRAVLMETSSESHTADADLSKYTHTPPEPAPAPARSPPEQMGVHSVTSATPMPLQEA
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(5025240..5025308,5027116..5027226,5042496..5042674,5052777..5052862,5080961..5081125,5082522..5082647,5089861..5089963,5091121..5091514,5103538..5103546)
location: region:5025240-5103546:1
so has part: feature:5025240-5025308:1:exon
so has part: feature:5027116-5027226:1:exon
so has part: feature:5042496-5042674:1:exon
so has part: feature:5052777-5052862:1:exon
so has part: feature:5080961-5081125:1:exon
so has part: feature:5082522-5082647:1:exon
so has part: feature:5089861-5089963:1:exon
so has part: feature:5091121-5091514:1:exon
so has part: feature:5103538-5103546:1:exon

XP_012782199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5025240-5025308:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5027116-5027226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5042496-5042674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5052777-5052862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5080961-5081125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5082522-5082647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5089861-5089963:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5091121-5091514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5103538-5103546:1:exon

LOC101515988
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101515988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5140899..5283750)
location: region:5140899-5283750:-1
so has part: feature:5140899-5283750:-1:exon
subclass of: SO_0000010

101515988
type: Gene
SIO_000068: ncbigene

position:5140899:-1
position: 5140899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5283750:-1
position: 5283750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5140899-5283750:-1:exon

LOC101515988
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101515988
product: mitochondrial intermediate peptidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493492.1
SIO_010081: LOC101515988
subclass of: SO_0000673
so part of: LOC101515988
location: complement(join(5140899..5141198,5166899..5166972,5169926..5170047,5202270..5202389,5206233..5206307,5221475..5221584,5223109..5223313,5224986..5225063,5276584..5276694,5279518..5279691,5283562..5283750))
location: region:5140899-5283750:-1
so has part: feature:5283562-5283750:-1:exon
so has part: feature:5279518-5279691:-1:exon
so has part: feature:5276584-5276694:-1:exon
so has part: feature:5224986-5225063:-1:exon
so has part: feature:5223109-5223313:-1:exon
so has part: feature:5221475-5221584:-1:exon
so has part: feature:5206233-5206307:-1:exon
so has part: feature:5202270-5202389:-1:exon
so has part: feature:5169926-5170047:-1:exon
so has part: feature:5166899-5166972:-1:exon
so has part: feature:5140899-5141198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5283562-5283750:-1:exon

position:5283562:-1
position: 5283562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5279518-5279691:-1:exon

position:5279518:-1
position: 5279518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5279691:-1
position: 5279691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5276584-5276694:-1:exon

position:5276584:-1
position: 5276584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5276694:-1
position: 5276694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5224986-5225063:-1:exon

position:5224986:-1
position: 5224986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5225063:-1
position: 5225063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5223109-5223313:-1:exon

position:5223109:-1
position: 5223109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5223313:-1
position: 5223313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5221475-5221584:-1:exon

position:5221475:-1
position: 5221475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5221584:-1
position: 5221584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5206233-5206307:-1:exon

position:5206233:-1
position: 5206233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5206307:-1
position: 5206307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5202270-5202389:-1:exon

position:5202270:-1
position: 5202270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5202389:-1
position: 5202389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5169926-5170047:-1:exon

position:5169926:-1
position: 5169926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5170047:-1
position: 5170047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5166899-5166972:-1:exon

position:5166899:-1
position: 5166899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5166972:-1
position: 5166972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5140899-5141198:-1:exon

position:5141198:-1
position: 5141198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101515988
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101515988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial intermediate peptidase
translation: MLCTRRLGGLGAGVGALRPRRACRGCLGAGSWARTVSTGWSPVGAAFNVQPRGHRWHLLGERQGLFGVPELSAPEGFRLAQEKALRRTDLLVERACSTPPGPQTVRIFDELSDSLCRVADLADFVKIAHPEPAFREAAEEACRSIGTVVEKYVFFPSRAVVHESEGLLGYIYCDFFQRDDKPHQDCHFTIRGGRLKEDGEYQLPVVVLMLNLPHSTRTSPTLLTPGMMENLFHEMGHAMHSMLGRTRYQHVTGTRCPTDFAEVPSILMEYFANDYRVVNQFARHYQTGQPLPKNMVSRLCESKKVCAAADMQLQVFYAMLDQIYHGRHPLMKSTTDILKETQEKFYGLPYVPNTAWQLRFSHLVGYGAKYYSYLMSRAVASMVWKECFLQDPFNRAAGERYRREMLAHGGGKEPILMVQGLLQKCPSVDDLVSALVSDLDLDFETFLMDSE
SIO_010081: LOC101515988
subclass of: SO_0000673
so part of: LOC101515988
location: complement(join(5141101..5141198,5166899..5166972,5169926..5170047,5202270..5202389,5206233..5206307,5221475..5221584,5223109..5223313,5224986..5225063,5276584..5276694,5279518..5279691,5283562..5283750))
location: region:5141101-5283750:-1
so has part: feature:5283562-5283750:-1:exon
so has part: feature:5279518-5279691:-1:exon
so has part: feature:5276584-5276694:-1:exon
so has part: feature:5224986-5225063:-1:exon
so has part: feature:5223109-5223313:-1:exon
so has part: feature:5221475-5221584:-1:exon
so has part: feature:5206233-5206307:-1:exon
so has part: feature:5202270-5202389:-1:exon
so has part: feature:5169926-5170047:-1:exon
so has part: feature:5166899-5166972:-1:exon
so has part: feature:5141101-5141198:-1:exon

XP_036349385.1
type: Protein
SIO_000068: ncbiprotein

position:5141101:-1
position: 5141101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5283562-5283750:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5279518-5279691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5276584-5276694:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5224986-5225063:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5223109-5223313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5221475-5221584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5206233-5206307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5202270-5202389:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5169926-5170047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5166899-5166972:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5141101-5141198:-1:exon

LOC101517867
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101517867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5286670..5295275)
location: region:5286670-5295275:-1
so has part: feature:5286670-5295275:-1:exon
subclass of: SO_0000010

101517867
type: Gene
SIO_000068: ncbigene

position:5286670:-1
position: 5286670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5295275:-1
position: 5295275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5286670-5295275:-1:exon

LOC101517867
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101517867
product: complement C1q and tumor necrosis factor-related protein 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_004577579.1
SIO_010081: LOC101517867
subclass of: SO_0000673
so part of: LOC101517867
location: complement(join(5286670..5287439,5288677..5288739,5295110..5295275))
location: region:5286670-5295275:-1
so has part: feature:5295110-5295275:-1:exon
so has part: feature:5288677-5288739:-1:exon
so has part: feature:5286670-5287439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5295110-5295275:-1:exon

position:5295110:-1
position: 5295110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5288677-5288739:-1:exon

position:5288677:-1
position: 5288677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5288739:-1
position: 5288739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5286670-5287439:-1:exon

position:5287439:-1
position: 5287439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101517867
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101517867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q and tumor necrosis factor-related protein 9
translation: MRIWWLLLVIGVCLGSVSLQDTCRQGHPGMPGSPGHNGLPGRDGRDGAKGDKGDTGEPGHPGDPGKDGRSGEKGERGADGKVEAKGMKGDPGSRGSPGKHGPKGSVGPVGEPGLQGETGPQGQKGEKGDVGPMGPEGQTGDPGPAGPMGLRGPVGPIGKPGPKGDAGPVGPQGEPGVRGMRGWKGDRGEKGKIGETPVTPKSAFTVGLTVLSKFPDADVPIKFDKILYNDLNHYNVATGKFICYVAGVYYFTYHITVFSRNVQVSLVKNGMKVLHTKDAYMSSEDQASGGVVLELKLADEVWLQVAGGERFNGLFADEDDDTTFTGFLLFST
SIO_010081: LOC101517867
subclass of: SO_0000673
so part of: LOC101517867
location: complement(join(5286670..5287439,5288677..5288739,5295110..5295275))
location: region:5286670-5295275:-1
so has part: feature:5295110-5295275:-1:exon
so has part: feature:5288677-5288739:-1:exon
so has part: feature:5286670-5287439:-1:exon

XP_004577636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5295110-5295275:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5288677-5288739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5286670-5287439:-1:exon

SPATA13
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5308960..5381177)
location: region:5308960-5381177:-1
so has part: feature:5308960-5381177:-1:exon
subclass of: SO_0000010

101517613
type: Gene
SIO_000068: ncbigene

position:5308960:-1
position: 5308960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5381177:-1
position: 5381177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5308960-5381177:-1:exon

SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SPATA13
product: spermatogenesis associated 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 Proteins
transcript id: XM_004577578.1
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(5308960..5309135,5311074..5311148,5313663..5314035,5315902..5316031,5318570..5318802,5320168..5320347,5321927..5322112,5322419..5322598,5323869..5324005,5359665..5359809,5361453..5361818,5379558..5381177))
location: region:5308960-5381177:-1
so has part: feature:5379558-5381177:-1:exon
so has part: feature:5361453-5361818:-1:exon
so has part: feature:5359665-5359809:-1:exon
so has part: feature:5323869-5324005:-1:exon
so has part: feature:5322419-5322598:-1:exon
so has part: feature:5321927-5322112:-1:exon
so has part: feature:5320168-5320347:-1:exon
so has part: feature:5318570-5318802:-1:exon
so has part: feature:5315902-5316031:-1:exon
so has part: feature:5313663-5314035:-1:exon
so has part: feature:5311074-5311148:-1:exon
so has part: feature:5308960-5309135:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5379558-5381177:-1:exon

position:5379558:-1
position: 5379558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5361453-5361818:-1:exon

position:5361453:-1
position: 5361453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5361818:-1
position: 5361818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5359665-5359809:-1:exon

position:5359665:-1
position: 5359665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5359809:-1
position: 5359809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5323869-5324005:-1:exon

position:5323869:-1
position: 5323869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5324005:-1
position: 5324005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5322419-5322598:-1:exon

position:5322419:-1
position: 5322419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5322598:-1
position: 5322598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5321927-5322112:-1:exon

position:5321927:-1
position: 5321927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5322112:-1
position: 5322112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5320168-5320347:-1:exon

position:5320168:-1
position: 5320168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5320347:-1
position: 5320347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5318570-5318802:-1:exon

position:5318570:-1
position: 5318570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5318802:-1
position: 5318802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5315902-5316031:-1:exon

position:5315902:-1
position: 5315902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5316031:-1
position: 5316031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5313663-5314035:-1:exon

position:5313663:-1
position: 5313663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5314035:-1
position: 5314035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5311074-5311148:-1:exon

position:5311074:-1
position: 5311074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5311148:-1
position: 5311148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5308960-5309135:-1:exon

position:5309135:-1
position: 5309135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13 isoform X1
translation: MTTAQNGHGPTAAITCSAADSRDPSTGASQNGACGADAEAQGAKLSPSKLVRLFSMSRKRTNAHAERPRSMVLVGNSSTWNALASFRKMGSFKKLKSSVLQGIQNREGSDPWKEEAAERDSAKALANGAVPGGQAGRCSLSTLATEPLKTGDGCGSDCSDPEDTDDAFQRSTHRSRSIRRAYGLGRISLLDAEKPQDSQHPGRPLSPILQEPALCEILVKDSENDSIAYRRSKSTDNLSFLRKSSFKRKSASNLADLRAAAAHDKPQVPQRTLSSSSTDSDKLGASERRTKRWRSPIRAMDLDRVLKFVSNVTDAAWKREGPKGAAPAPAEAHPRLGLHSRLHDDYSRRVSSCTEPDRRCAASPVRSVPASFPPATCHDARIDVDTAVFPLEAQSSGPADRNGLRTSSSSSSSPLASELSSQDPGEPRSGSRFTFESEQPPPTPLRPTTPKPPSPQSPGALNYPSNLSALSLSSVESEGKAEDPAQREAGPATCQDSMPTTAGIDENSQDSGSGSHPQPSPVEKKEEVVTDDNWRRGSSQDEEKPDAQRVPRRRWGSGRRSRPRPLSDYGQLASRSSSIPEDAIAVSPQGEDCVDGDGPASMTSSRPADQSAPAAHAKGARRRRPISVIGGVSFYGNNQTEEIENLLTQPTARPPVPTHQVPPYKAVSARLRPFAFSQSTPIGLDRVGRRRQMRASNISSDGGTESSALVDDNGSEEDFSYEELCQANPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDEQELGFKAGDVIQVLEATNKDWWWGRNEDREAWFPASFVRLRVNQEELSGNSSSTPGEEPEEEAGRSRHKHSENQHQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACVELSNLMKQGKYRHFFEACRLLQQMIDIALDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGVDILDRSSELIHSGELTSITKQGKSQQRTFFLFDHQLVSCKKDLLRRDMLYYKGRIDMDEMELVDVEDGRDKDWNLSVRNAFKLVSRTTSEVHLFCAKKQEDKARWLQACSDERRRVQEDQEMGMEISENQKKLAMLNAQKTGHGKSKSYSGCPVAPPHQGLHPLHQRHITVPTSIPQQQVFALAEPKRKPSLFWHTFNKLTPFKK
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(5308960..5309135,5311074..5311148,5313663..5314035,5315902..5316031,5318570..5318802,5320168..5320347,5321927..5322112,5322419..5322598,5323869..5324005,5359665..5359809,5361453..5361818,5379558..5381138))
location: region:5308960-5381138:-1
so has part: feature:5379558-5381138:-1:exon
so has part: feature:5361453-5361818:-1:exon
so has part: feature:5359665-5359809:-1:exon
so has part: feature:5323869-5324005:-1:exon
so has part: feature:5322419-5322598:-1:exon
so has part: feature:5321927-5322112:-1:exon
so has part: feature:5320168-5320347:-1:exon
so has part: feature:5318570-5318802:-1:exon
so has part: feature:5315902-5316031:-1:exon
so has part: feature:5313663-5314035:-1:exon
so has part: feature:5311074-5311148:-1:exon
so has part: feature:5308960-5309135:-1:exon

XP_004577635.1
type: Protein
SIO_000068: ncbiprotein

position:5381138:-1
position: 5381138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5379558-5381138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5361453-5361818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5359665-5359809:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5323869-5324005:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5322419-5322598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5321927-5322112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5320168-5320347:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5318570-5318802:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5315902-5316031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5313663-5314035:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5311074-5311148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5308960-5309135:-1:exon

SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SPATA13
product: spermatogenesis associated 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XM_036493369.1
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(5308960..5309135,5311074..5311148,5313663..5314035,5315902..5316031,5318570..5318802,5320168..5320347,5321927..5322112,5322419..5322598,5323869..5324005,5340034..5340088))
location: region:5308960-5340088:-1
so has part: feature:5340034-5340088:-1:exon
so has part: feature:5323869-5324005:-1:exon
so has part: feature:5322419-5322598:-1:exon
so has part: feature:5321927-5322112:-1:exon
so has part: feature:5320168-5320347:-1:exon
so has part: feature:5318570-5318802:-1:exon
so has part: feature:5315902-5316031:-1:exon
so has part: feature:5313663-5314035:-1:exon
so has part: feature:5311074-5311148:-1:exon
so has part: feature:5308960-5309135:-1:exon

position:5340088:-1
position: 5340088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5340034-5340088:-1:exon

position:5340034:-1
position: 5340034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5323869-5324005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5322419-5322598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5321927-5322112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5320168-5320347:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5318570-5318802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5315902-5316031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5313663-5314035:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5311074-5311148:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5308960-5309135:-1:exon

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13 isoform X2
translation: MVARGEIARFWSLESLHMVSSDGGTESSALVDDNGSEEDFSYEELCQANPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDEQELGFKAGDVIQVLEATNKDWWWGRNEDREAWFPASFVRLRVNQEELSGNSSSTPGEEPEEEAGRSRHKHSENQHQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACVELSNLMKQGKYRHFFEACRLLQQMIDIALDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGVDILDRSSELIHSGELTSITKQGKSQQRTFFLFDHQLVSCKKDLLRRDMLYYKGRIDMDEMELVDVEDGRDKDWNLSVRNAFKLVSRTTSEVHLFCAKKQEDKARWLQACSDERRRVQEDQEMGMEISENQKKLAMLNAQKTGHGKSKSYSGCPVAPPHQGLHPLHQRHITVPTSIPQQQVFALAEPKRKPSLFWHTFNKLTPFKK
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(5308960..5309135,5311074..5311148,5313663..5314035,5315902..5316031,5318570..5318802,5320168..5320347,5321927..5322112,5322419..5322598,5323869..5324005,5340034..5340088))
location: region:5308960-5340088:-1
so has part: feature:5340034-5340088:-1:exon
so has part: feature:5323869-5324005:-1:exon
so has part: feature:5322419-5322598:-1:exon
so has part: feature:5321927-5322112:-1:exon
so has part: feature:5320168-5320347:-1:exon
so has part: feature:5318570-5318802:-1:exon
so has part: feature:5315902-5316031:-1:exon
so has part: feature:5313663-5314035:-1:exon
so has part: feature:5311074-5311148:-1:exon
so has part: feature:5308960-5309135:-1:exon

XP_036349262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5340034-5340088:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5323869-5324005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5322419-5322598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5321927-5322112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5320168-5320347:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5318570-5318802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5315902-5316031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5313663-5314035:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5311074-5311148:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5308960-5309135:-1:exon

AMER2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: AMER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5691827..5706282)
location: region:5691827-5706282:-1
so has part: feature:5691827-5706282:-1:exon
subclass of: SO_0000010

101517363
type: Gene
SIO_000068: ncbigene

position:5691827:-1
position: 5691827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5706282:-1
position: 5706282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5691827-5706282:-1:exon

AMER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: AMER2
product: APC membrane recruitment protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_004577577.1
SIO_010081: AMER2
subclass of: SO_0000673
so part of: AMER2
location: complement(join(5691827..5692686,5692917..5692975,5705531..5706282))
location: region:5691827-5706282:-1
so has part: feature:5705531-5706282:-1:exon
so has part: feature:5692917-5692975:-1:exon
so has part: feature:5691827-5692686:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5705531-5706282:-1:exon

position:5705531:-1
position: 5705531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5692917-5692975:-1:exon

position:5692917:-1
position: 5692917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5692975:-1
position: 5692975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5691827-5692686:-1:exon

position:5692686:-1
position: 5692686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AMER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: AMER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: APC membrane recruitment protein 2
translation: METSRSSGGGGAVSARVGHRASAGGCRRKEAAGAGTLSADMDLHCDCAAETPASEQPSGKINKAAFKLFKKRKSGGTMPSFFGVKNKGDGKSSGPAGMVRSRTHDGLAEVVVLEGGRKEEPRGGGGGGGGGRGGARPNPAPLRAAGGGGSSSGGGGSLAPSSSVAKSHSFFSLLRKNGRSEPGRGEPAEASQAGCKQKKGLRGLFSSMRWPRKDKRGKEEEEKKGARAAGAGGLILPGSLTASLECVKEATPRAPRGESSPGRPSHRGPASCGDIIADRDDEAGASCDRHGPGPGKPVASKKTPGVVAYQGGGEEMASPDEADDTCLQDFWDMLSQTEEQGQGPAEVEATTTAAPEATSGRSDTCPDAAMGTEAAKDVSSVKRRRLNRMPAEPHPKEEPRRPEKERQLEGGVPNGDQGFWDPTTPGPEGGSAGGGPKAAVPRNSGGGDADATPAALPAAEETTCTSRLKPVSPGAITCPLRTPGSLLKDSKIPISIKHLTNLPASHPAVHQPPARSEVPRTKIPVSKVLVRRVSSRGLAGTTLRAAAACHDSAKKL
SIO_010081: AMER2
subclass of: SO_0000673
so part of: AMER2
location: complement(join(5691827..5692686,5692917..5692975,5705531..5706282))
location: region:5691827-5706282:-1
so has part: feature:5705531-5706282:-1:exon
so has part: feature:5692917-5692975:-1:exon
so has part: feature:5691827-5692686:-1:exon

XP_004577634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5705531-5706282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5692917-5692975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5691827-5692686:-1:exon

MTMR6
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5779560..5813859)
location: region:5779560-5813859:-1
so has part: feature:5779560-5813859:-1:exon
subclass of: SO_0000010

101517116
type: Gene
SIO_000068: ncbigene

position:5779560:-1
position: 5779560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5813859:-1
position: 5813859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5779560-5813859:-1:exon

MTMR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MTMR6
product: myotubularin related protein 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577576.3
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(5779560..5780160,5781263..5781389,5781469..5781594,5783116..5783316,5783722..5783771,5786248..5786373,5787114..5787223,5788078..5788210,5791166..5791300,5794215..5794343,5795089..5795246,5796806..5796968,5801166..5801282,5813836..5813859))
location: region:5779560-5813859:-1
so has part: feature:5813836-5813859:-1:exon
so has part: feature:5801166-5801282:-1:exon
so has part: feature:5796806-5796968:-1:exon
so has part: feature:5795089-5795246:-1:exon
so has part: feature:5794215-5794343:-1:exon
so has part: feature:5791166-5791300:-1:exon
so has part: feature:5788078-5788210:-1:exon
so has part: feature:5787114-5787223:-1:exon
so has part: feature:5786248-5786373:-1:exon
so has part: feature:5783722-5783771:-1:exon
so has part: feature:5783116-5783316:-1:exon
so has part: feature:5781469-5781594:-1:exon
so has part: feature:5781263-5781389:-1:exon
so has part: feature:5779560-5780160:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5813836-5813859:-1:exon

position:5813836:-1
position: 5813836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5801166-5801282:-1:exon

position:5801166:-1
position: 5801166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5801282:-1
position: 5801282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5796806-5796968:-1:exon

position:5796806:-1
position: 5796806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5796968:-1
position: 5796968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5795089-5795246:-1:exon

position:5795089:-1
position: 5795089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5795246:-1
position: 5795246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5794215-5794343:-1:exon

position:5794215:-1
position: 5794215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5794343:-1
position: 5794343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5791166-5791300:-1:exon

position:5791166:-1
position: 5791166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5791300:-1
position: 5791300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5788078-5788210:-1:exon

position:5788078:-1
position: 5788078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5788210:-1
position: 5788210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5787114-5787223:-1:exon

position:5787114:-1
position: 5787114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5787223:-1
position: 5787223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5786248-5786373:-1:exon

position:5786248:-1
position: 5786248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5786373:-1
position: 5786373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5783722-5783771:-1:exon

position:5783722:-1
position: 5783722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5783771:-1
position: 5783771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5783116-5783316:-1:exon

position:5783116:-1
position: 5783116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5783316:-1
position: 5783316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5781469-5781594:-1:exon

position:5781469:-1
position: 5781469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5781594:-1
position: 5781594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5781263-5781389:-1:exon

position:5781263:-1
position: 5781263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5781389:-1
position: 5781389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5779560-5780160:-1:exon

position:5780160:-1
position: 5780160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTMR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MTMR6
product: myotubularin related protein 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493383.1
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(5779560..5780160,5781263..5781389,5781469..5781594,5783116..5783316,5783722..5783771,5786248..5786373,5787114..5787223,5788078..5788210,5789539..5789652,5791166..5791300,5794215..5794343,5795089..5795157))
location: region:5779560-5795157:-1
so has part: feature:5795089-5795157:-1:exon
so has part: feature:5794215-5794343:-1:exon
so has part: feature:5791166-5791300:-1:exon
so has part: feature:5789539-5789652:-1:exon
so has part: feature:5788078-5788210:-1:exon
so has part: feature:5787114-5787223:-1:exon
so has part: feature:5786248-5786373:-1:exon
so has part: feature:5783722-5783771:-1:exon
so has part: feature:5783116-5783316:-1:exon
so has part: feature:5781469-5781594:-1:exon
so has part: feature:5781263-5781389:-1:exon
so has part: feature:5779560-5780160:-1:exon

position:5795157:-1
position: 5795157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5795089-5795157:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5794215-5794343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5791166-5791300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5789539-5789652:-1:exon

position:5789539:-1
position: 5789539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5789652:-1
position: 5789652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5788078-5788210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5787114-5787223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5786248-5786373:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5783722-5783771:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5783116-5783316:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5781469-5781594:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5781263-5781389:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5779560-5780160:-1:exon

MTMR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MTMR6
product: myotubularin related protein 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493384.1
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(5779783..5780160,5781469..5781594,5783116..5783316,5783722..5783771,5786248..5786373,5787114..5787223,5788078..5788210,5791166..5791300,5794215..5794343,5795089..5795142))
location: region:5779783-5795142:-1
so has part: feature:5795089-5795142:-1:exon
so has part: feature:5794215-5794343:-1:exon
so has part: feature:5791166-5791300:-1:exon
so has part: feature:5788078-5788210:-1:exon
so has part: feature:5787114-5787223:-1:exon
so has part: feature:5786248-5786373:-1:exon
so has part: feature:5783722-5783771:-1:exon
so has part: feature:5783116-5783316:-1:exon
so has part: feature:5781469-5781594:-1:exon
so has part: feature:5779783-5780160:-1:exon

position:5779783:-1
position: 5779783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5795142:-1
position: 5795142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5795089-5795142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5794215-5794343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5791166-5791300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5788078-5788210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5787114-5787223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5786248-5786373:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5783722-5783771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5783116-5783316:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5781469-5781594:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5779783-5780160:-1:exon

MTMR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6 isoform X1
translation: MEHIRTTKVEQVKLLDRFSTNNKSLTGTLYLTATHLLFIDSHQKETWILHHHIASVEKLALTTSGCPLVIQCKNFRIVHFIVPRERDCHDIYNSLLQLSKQAKYEDLYAFSYNPKQNDSERLHGWHLIDLAEEYKRMGVPNSNWQLSDANREYKICETYPRELYVPRIASKPIIVGSSKFRSKGRFPVLSYYHQDKEAAICRCSQPLSGFSARCLEDEHLLQAVSKANPANRYMYVMDTRPKLNAMANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVNGTKGLCVNDFYSGLESSGWLRHIKAVMDAAIFLAKAIVVENASVLVHCSDGWDRTSQVCSLGSLLLDPFYRTVRGFMVLIEKDWISFGHKFSDRCGHLDGDPKEVSPVFTQFLECVWHLTEQFPQAFEFNEAFLLQIHEHIYSCQFGNFLGNCQKEREELKLKEKTYSLWPFLLDELKKYLNPVYSSERFTMLEPNTVSFNFKFWRNMYHQFDRTLHPRQSVLNRIMNMNEQNKQLEQDVKDLESKIKQCKNQETDGVLTKELLRSVHPESPALKASLCLKEQTLLPGNDALRTIEGSSPADNRYSDYAEQFSKAEAAVVSLEYGVARMTC
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(5779900..5780160,5781263..5781389,5781469..5781594,5783116..5783316,5783722..5783771,5786248..5786373,5787114..5787223,5788078..5788210,5791166..5791300,5794215..5794343,5795089..5795246,5796806..5796968,5801166..5801282,5813836..5813859))
location: region:5779900-5813859:-1
so has part: feature:5813836-5813859:-1:exon
so has part: feature:5801166-5801282:-1:exon
so has part: feature:5796806-5796968:-1:exon
so has part: feature:5795089-5795246:-1:exon
so has part: feature:5794215-5794343:-1:exon
so has part: feature:5791166-5791300:-1:exon
so has part: feature:5788078-5788210:-1:exon
so has part: feature:5787114-5787223:-1:exon
so has part: feature:5786248-5786373:-1:exon
so has part: feature:5783722-5783771:-1:exon
so has part: feature:5783116-5783316:-1:exon
so has part: feature:5781469-5781594:-1:exon
so has part: feature:5781263-5781389:-1:exon
so has part: feature:5779900-5780160:-1:exon

XP_004577633.1
type: Protein
SIO_000068: ncbiprotein

position:5779900:-1
position: 5779900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5813836-5813859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5801166-5801282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5796806-5796968:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5795089-5795246:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5794215-5794343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5791166-5791300:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5788078-5788210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5787114-5787223:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5786248-5786373:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5783722-5783771:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5783116-5783316:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5781469-5781594:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5781263-5781389:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5779900-5780160:-1:exon

MTMR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6 isoform X2
translation: MGVPNSNWQLSDANREYKICETYPRELYVPRIASKPIIVGSSKFRSKGRFPVLSYYHQDKEAAICRCSQPLSGFSARCLEDEHLLQAVSKANPANRYMYVMDTRPKHRMQSWWDTQKDIGKIIVRISSKIWSDEEIEESDEEKRLNAMANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVNGTKGLCVNDFYSGLESSGWLRHIKAVMDAAIFLAKAIVVENASVLVHCSDGWDRTSQVCSLGSLLLDPFYRTVRGFMVLIEKDWISFGHKFSDRCGHLDGDPKEVSPVFTQFLECVWHLTEQFPQAFEFNEAFLLQIHEHIYSCQFGNFLGNCQKEREELKLKEKTYSLWPFLLDELKKYLNPVYSSERFTMLEPNTVSFNFKFWRNMYHQFDRTLHPRQSVLNRIMNMNEQNKQLEQDVKDLESKIKQCKNQETDGVLTKELLRSVHPESPALKASLCLKEQTLLPGNDALRTIEGSSPADNRYSDYAEQFSKAEAAVVSLEYGVARMTC
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(5779900..5780160,5781263..5781389,5781469..5781594,5783116..5783316,5783722..5783771,5786248..5786373,5787114..5787223,5788078..5788210,5789539..5789652,5791166..5791300,5794215..5794343,5795089..5795142))
location: region:5779900-5795142:-1
so has part: feature:5795089-5795142:-1:exon
so has part: feature:5794215-5794343:-1:exon
so has part: feature:5791166-5791300:-1:exon
so has part: feature:5789539-5789652:-1:exon
so has part: feature:5788078-5788210:-1:exon
so has part: feature:5787114-5787223:-1:exon
so has part: feature:5786248-5786373:-1:exon
so has part: feature:5783722-5783771:-1:exon
so has part: feature:5783116-5783316:-1:exon
so has part: feature:5781469-5781594:-1:exon
so has part: feature:5781263-5781389:-1:exon
so has part: feature:5779900-5780160:-1:exon

XP_036349276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5795089-5795142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5794215-5794343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5791166-5791300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5789539-5789652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5788078-5788210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5787114-5787223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5786248-5786373:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5783722-5783771:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5783116-5783316:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5781469-5781594:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5781263-5781389:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5779900-5780160:-1:exon

MTMR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6 isoform X3
translation: MGVPNSNWQLSDANREYKICETYPRELYVPRIASKPIIVGSSKFRSKGRFPVLSYYHQDKEAAICRCSQPLSGFSARCLEDEHLLQAVSKANPANRYMYVMDTRPKLNAMANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVNGTKGLCVNDFYSGLESSGWLRHIKAVMDAAIFLAKAIVVENASVLVHCSDGWDRTSQVCSLGSLLLDPFYRTVRGFMVLIEKDWISFGHKFSDRCGHLDGDPKEVSPVFTQFLECVWHLTEQFPQAFEFNEAFLLQIHEHIYSCQFGNFLGNCQKEREELKLKEKTYSLWPFLLDELKKYLNPVYSSERFTMLEPNTVSFNFKKLNNAKTKRQMACSPRNCCVQFILSHLR
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(5780073..5780160,5781469..5781594,5783116..5783316,5783722..5783771,5786248..5786373,5787114..5787223,5788078..5788210,5791166..5791300,5794215..5794343,5795089..5795142))
location: region:5780073-5795142:-1
so has part: feature:5795089-5795142:-1:exon
so has part: feature:5794215-5794343:-1:exon
so has part: feature:5791166-5791300:-1:exon
so has part: feature:5788078-5788210:-1:exon
so has part: feature:5787114-5787223:-1:exon
so has part: feature:5786248-5786373:-1:exon
so has part: feature:5783722-5783771:-1:exon
so has part: feature:5783116-5783316:-1:exon
so has part: feature:5781469-5781594:-1:exon
so has part: feature:5780073-5780160:-1:exon

XP_036349277.1
type: Protein
SIO_000068: ncbiprotein

position:5780073:-1
position: 5780073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5795089-5795142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5794215-5794343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5791166-5791300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5788078-5788210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5787114-5787223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5786248-5786373:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5783722-5783771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5783116-5783316:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5781469-5781594:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5780073-5780160:-1:exon

NUP58
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5823055..5888538
location: region:5823055-5888538:1
so has part: feature:5823055-5888538:1:exon
subclass of: SO_0000010

101536549
type: Gene
SIO_000068: ncbigene

position:5823055:1
position: 5823055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5888538:1
position: 5888538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5823055-5888538:1:exon

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: NUP58
product: nucleoporin 58
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 Protein, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012926878.2
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(5823055..5823166,5834965..5835165,5836100..5836234,5849808..5849918,5852385..5852409,5855179..5855244,5857193..5857367,5860913..5860992,5863889..5864007,5864421..5864503,5867908..5868109,5873040..5873138,5874657..5874752,5888377..5888538)
location: region:5823055-5888538:1
so has part: feature:5823055-5823166:1:exon
so has part: feature:5834965-5835165:1:exon
so has part: feature:5836100-5836234:1:exon
so has part: feature:5849808-5849918:1:exon
so has part: feature:5852385-5852409:1:exon
so has part: feature:5855179-5855244:1:exon
so has part: feature:5857193-5857367:1:exon
so has part: feature:5860913-5860992:1:exon
so has part: feature:5863889-5864007:1:exon
so has part: feature:5864421-5864503:1:exon
so has part: feature:5867908-5868109:1:exon
so has part: feature:5873040-5873138:1:exon
so has part: feature:5874657-5874752:1:exon
so has part: feature:5888377-5888538:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5823055-5823166:1:exon

position:5823166:1
position: 5823166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5834965-5835165:1:exon

position:5834965:1
position: 5834965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5835165:1
position: 5835165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5836100-5836234:1:exon

position:5836100:1
position: 5836100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5836234:1
position: 5836234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5849808-5849918:1:exon

position:5849808:1
position: 5849808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5849918:1
position: 5849918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5852385-5852409:1:exon

position:5852385:1
position: 5852385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5852409:1
position: 5852409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5855179-5855244:1:exon

position:5855179:1
position: 5855179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5855244:1
position: 5855244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5857193-5857367:1:exon

position:5857193:1
position: 5857193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5857367:1
position: 5857367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5860913-5860992:1:exon

position:5860913:1
position: 5860913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5860992:1
position: 5860992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5863889-5864007:1:exon

position:5863889:1
position: 5863889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5864007:1
position: 5864007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5864421-5864503:1:exon

position:5864421:1
position: 5864421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5864503:1
position: 5864503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5867908-5868109:1:exon

position:5867908:1
position: 5867908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5868109:1
position: 5868109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5873040-5873138:1:exon

position:5873040:1
position: 5873040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5873138:1
position: 5873138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5874657-5874752:1:exon

position:5874657:1
position: 5874657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5874752:1
position: 5874752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5888377-5888538:1:exon

position:5888377:1
position: 5888377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45
translation: MSGLIHFDTIREPQALQVPPVFIPTTPLLFKLFSSPEIQYACPYLVKWGFVSVSGAPATTSAATTGFSLGFSKPAASATPFALPVTTTSASGLTLSSALTSTPAASTGFTLNNLGGTATTTTASTGLSLGGALTGLGGSLFQSTNTATSGLGQNALGLTLGTAPATSTAGNEGLGGIDFSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAASGLQRNTLNIDKLKVETAQELKNAEIALRTQKTPPGLQHENTAPADYFRVLVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMLKIYQTFVALAAQLQSIHENVKVLKEQYLGYRKMFLGDAADVFEARRAEAKKWQNAPRVTTGPTPFSTMPNAAAVAMAATLTQQQQPAPGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGTSSGFGCSTTGASTFGFGTTNKPSGSLSAGNKSQVLTGFRKPSVTETNEVGRKIQF
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(5823055..5823166,5834965..5835165,5836100..5836234,5849808..5849918,5852385..5852409,5855179..5855244,5857193..5857367,5860913..5860992,5863889..5864007,5864421..5864503,5867908..5868109,5873040..5873138,5874657..5874752,5888377..5888459)
location: region:5823055-5888459:1
so has part: feature:5823055-5823166:1:exon
so has part: feature:5834965-5835165:1:exon
so has part: feature:5836100-5836234:1:exon
so has part: feature:5849808-5849918:1:exon
so has part: feature:5852385-5852409:1:exon
so has part: feature:5855179-5855244:1:exon
so has part: feature:5857193-5857367:1:exon
so has part: feature:5860913-5860992:1:exon
so has part: feature:5863889-5864007:1:exon
so has part: feature:5864421-5864503:1:exon
so has part: feature:5867908-5868109:1:exon
so has part: feature:5873040-5873138:1:exon
so has part: feature:5874657-5874752:1:exon
so has part: feature:5888377-5888459:1:exon

XP_012782332.2
type: Protein
SIO_000068: ncbiprotein

position:5888459:1
position: 5888459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5823055-5823166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5834965-5835165:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5836100-5836234:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5849808-5849918:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5852385-5852409:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5855179-5855244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5857193-5857367:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5860913-5860992:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5863889-5864007:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5864421-5864503:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5867908-5868109:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5873040-5873138:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5874657-5874752:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5888377-5888459:1:exon

LOC101536302
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101536302
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5918674..6569184
location: region:5918674-6569184:1
so has part: feature:5918674-6569184:1:exon
subclass of: SO_0000010

101536302
type: Gene
SIO_000068: ncbigene

position:5918674:1
position: 5918674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6569184:1
position: 6569184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5918674-6569184:1:exon

LOC101536302
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101536302
product: phospholipid-transporting ATPase IB
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577704.3
SIO_010081: LOC101536302
subclass of: SO_0000673
so part of: LOC101536302
location: join(5918674..5918749,6012504..6012645,6071775..6071874,6072334..6072432,6073231..6073276,6073895..6073935,6079505..6079578,6083136..6083205,6084080..6084207,6085421..6085532,6094259..6094424,6095057..6095184,6105056..6105144,6105420..6105464,6111541..6111616,6117990..6118095,6118738..6118820,6119608..6119657,6121740..6121809,6123640..6123724,6124662..6124801,6126633..6126771,6138257..6138321,6230305..6230477,6318917..6319100,6324257..6324367,6389733..6389807,6393648..6393770,6396145..6396223,6412341..6412402,6412908..6412964,6415729..6415840,6509364..6509448,6517873..6517977,6562523..6562614,6568979..6569184)
location: region:5918674-6569184:1
so has part: feature:5918674-5918749:1:exon
so has part: feature:6012504-6012645:1:exon
so has part: feature:6071775-6071874:1:exon
so has part: feature:6072334-6072432:1:exon
so has part: feature:6073231-6073276:1:exon
so has part: feature:6073895-6073935:1:exon
so has part: feature:6079505-6079578:1:exon
so has part: feature:6083136-6083205:1:exon
so has part: feature:6084080-6084207:1:exon
so has part: feature:6085421-6085532:1:exon
so has part: feature:6094259-6094424:1:exon
so has part: feature:6095057-6095184:1:exon
so has part: feature:6105056-6105144:1:exon
so has part: feature:6105420-6105464:1:exon
so has part: feature:6111541-6111616:1:exon
so has part: feature:6117990-6118095:1:exon
so has part: feature:6118738-6118820:1:exon
so has part: feature:6119608-6119657:1:exon
so has part: feature:6121740-6121809:1:exon
so has part: feature:6123640-6123724:1:exon
so has part: feature:6124662-6124801:1:exon
so has part: feature:6126633-6126771:1:exon
so has part: feature:6138257-6138321:1:exon
so has part: feature:6230305-6230477:1:exon
so has part: feature:6318917-6319100:1:exon
so has part: feature:6324257-6324367:1:exon
so has part: feature:6389733-6389807:1:exon
so has part: feature:6393648-6393770:1:exon
so has part: feature:6396145-6396223:1:exon
so has part: feature:6412341-6412402:1:exon
so has part: feature:6412908-6412964:1:exon
so has part: feature:6415729-6415840:1:exon
so has part: feature:6509364-6509448:1:exon
so has part: feature:6517873-6517977:1:exon
so has part: feature:6562523-6562614:1:exon
so has part: feature:6568979-6569184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5918674-5918749:1:exon

position:5918749:1
position: 5918749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6012504-6012645:1:exon

position:6012504:1
position: 6012504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6012645:1
position: 6012645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6071775-6071874:1:exon

position:6071775:1
position: 6071775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6071874:1
position: 6071874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6072334-6072432:1:exon

position:6072334:1
position: 6072334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6072432:1
position: 6072432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6073231-6073276:1:exon

position:6073231:1
position: 6073231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6073276:1
position: 6073276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6073895-6073935:1:exon

position:6073895:1
position: 6073895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6073935:1
position: 6073935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6079505-6079578:1:exon

position:6079505:1
position: 6079505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6079578:1
position: 6079578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6083136-6083205:1:exon

position:6083136:1
position: 6083136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6083205:1
position: 6083205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6084080-6084207:1:exon

position:6084080:1
position: 6084080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6084207:1
position: 6084207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6085421-6085532:1:exon

position:6085421:1
position: 6085421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6085532:1
position: 6085532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6094259-6094424:1:exon

position:6094259:1
position: 6094259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6094424:1
position: 6094424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6095057-6095184:1:exon

position:6095057:1
position: 6095057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6095184:1
position: 6095184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6105056-6105144:1:exon

position:6105056:1
position: 6105056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6105144:1
position: 6105144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6105420-6105464:1:exon

position:6105420:1
position: 6105420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6105464:1
position: 6105464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6111541-6111616:1:exon

position:6111541:1
position: 6111541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6111616:1
position: 6111616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6117990-6118095:1:exon

position:6117990:1
position: 6117990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6118095:1
position: 6118095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6118738-6118820:1:exon

position:6118738:1
position: 6118738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6118820:1
position: 6118820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6119608-6119657:1:exon

position:6119608:1
position: 6119608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6119657:1
position: 6119657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6121740-6121809:1:exon

position:6121740:1
position: 6121740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6121809:1
position: 6121809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6123640-6123724:1:exon

position:6123640:1
position: 6123640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6123724:1
position: 6123724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6124662-6124801:1:exon

position:6124662:1
position: 6124662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6124801:1
position: 6124801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6126633-6126771:1:exon

position:6126633:1
position: 6126633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6126771:1
position: 6126771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6138257-6138321:1:exon

position:6138257:1
position: 6138257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6138321:1
position: 6138321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6230305-6230477:1:exon

position:6230305:1
position: 6230305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6230477:1
position: 6230477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6318917-6319100:1:exon

position:6318917:1
position: 6318917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6319100:1
position: 6319100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:6324257-6324367:1:exon

position:6324257:1
position: 6324257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6324367:1
position: 6324367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:6389733-6389807:1:exon

position:6389733:1
position: 6389733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6389807:1
position: 6389807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:6393648-6393770:1:exon

position:6393648:1
position: 6393648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6393770:1
position: 6393770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:6396145-6396223:1:exon

position:6396145:1
position: 6396145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6396223:1
position: 6396223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:6412341-6412402:1:exon

position:6412341:1
position: 6412341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6412402:1
position: 6412402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:6412908-6412964:1:exon

position:6412908:1
position: 6412908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6412964:1
position: 6412964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:6415729-6415840:1:exon

position:6415729:1
position: 6415729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6415840:1
position: 6415840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:6509364-6509448:1:exon

position:6509364:1
position: 6509364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6509448:1
position: 6509448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:6517873-6517977:1:exon

position:6517873:1
position: 6517873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6517977:1
position: 6517977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:6562523-6562614:1:exon

position:6562523:1
position: 6562523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6562614:1
position: 6562614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:6568979-6569184:1:exon

position:6568979:1
position: 6568979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101536302
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101536302
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IB
translation: MLNGAGLDKALRMSLPRRARIGSSVGPVRSSGYKKAEDEMSRATSVGDQLEAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIIILTIAGIKEIIEDFKRHKADNAVNKKKTIVLRNGMWHTIVWKEVAVGDVVKVLNGQYLPADMVLLSSSEPQAMCYVETANLDGETNLKIRQGLTHTADMQTRDVLMKLSGTIECEGPNRHLYDFTGNLNLDGKSPVSLGPDQILLRGTQLRNTQWVFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALYWNGSHGGKNWYIKKMDTSSDNFGYNLLTFIILYNNLIPISLLVTLEVVKYTQALFINWVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELAREPSSDDFCHMPPHPSDSCDFNDPRLLKNIEDHHPTAPCIQEFLTLLAVCHTVVPEKDGDNIIYQASSPDEAALVKGAKKLGFVFTGRTPYSVIIEAMGQEQTFGILNVLEFSSDRKRMSVIVRTPSGQLRLYCKGADNVIFERLSKDSKYMEETLCHLEYFATEGLRTLCVAYADLSENDYEEWLKVYQEASTILKDRAQRLEECYEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCKLVSQNMALILLKEDSLDATRAAITQHCTDLGALLGKENDVALIIDGHTLKYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVDVVKKRVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERSCTQESMLRFPQLYKITQNAEGFNTKVFWGHCINALVHSLILFWFPMKALEHDTPLTNGHATDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFSHLAVWGSMLTWLVFFGIYSTIWPTIPIAPDMKGQVTMVLSSAHFWLGLFLVPTACLMEDVAWRAAKHTCKKTLLEEVQELETKSRMMGKEMLQDSNGKRMNERDRLIKRLSRKTPPTLFRGSSVSQSVPHGYAFSQEEHGAVTQEEIVRSYDTTKKKAKKK
SIO_010081: LOC101536302
subclass of: SO_0000673
so part of: LOC101536302
location: join(5918674..5918749,6012504..6012645,6071775..6071874,6072334..6072432,6073231..6073276,6073895..6073935,6079505..6079578,6083136..6083205,6084080..6084207,6085421..6085532,6094259..6094424,6095057..6095184,6105056..6105144,6105420..6105464,6111541..6111616,6117990..6118095,6118738..6118820,6119608..6119657,6121740..6121809,6123640..6123724,6124662..6124801,6126633..6126771,6138257..6138321,6230305..6230477,6318917..6319100,6324257..6324367,6389733..6389807,6393648..6393770,6396145..6396223,6412341..6412402,6412908..6412964,6415729..6415840,6509364..6509448,6517873..6517977,6562523..6562614,6568979..6569076)
location: region:5918674-6569076:1
so has part: feature:5918674-5918749:1:exon
so has part: feature:6012504-6012645:1:exon
so has part: feature:6071775-6071874:1:exon
so has part: feature:6072334-6072432:1:exon
so has part: feature:6073231-6073276:1:exon
so has part: feature:6073895-6073935:1:exon
so has part: feature:6079505-6079578:1:exon
so has part: feature:6083136-6083205:1:exon
so has part: feature:6084080-6084207:1:exon
so has part: feature:6085421-6085532:1:exon
so has part: feature:6094259-6094424:1:exon
so has part: feature:6095057-6095184:1:exon
so has part: feature:6105056-6105144:1:exon
so has part: feature:6105420-6105464:1:exon
so has part: feature:6111541-6111616:1:exon
so has part: feature:6117990-6118095:1:exon
so has part: feature:6118738-6118820:1:exon
so has part: feature:6119608-6119657:1:exon
so has part: feature:6121740-6121809:1:exon
so has part: feature:6123640-6123724:1:exon
so has part: feature:6124662-6124801:1:exon
so has part: feature:6126633-6126771:1:exon
so has part: feature:6138257-6138321:1:exon
so has part: feature:6230305-6230477:1:exon
so has part: feature:6318917-6319100:1:exon
so has part: feature:6324257-6324367:1:exon
so has part: feature:6389733-6389807:1:exon
so has part: feature:6393648-6393770:1:exon
so has part: feature:6396145-6396223:1:exon
so has part: feature:6412341-6412402:1:exon
so has part: feature:6412908-6412964:1:exon
so has part: feature:6415729-6415840:1:exon
so has part: feature:6509364-6509448:1:exon
so has part: feature:6517873-6517977:1:exon
so has part: feature:6562523-6562614:1:exon
so has part: feature:6568979-6569076:1:exon

XP_004577761.1
type: Protein
SIO_000068: ncbiprotein

position:6569076:1
position: 6569076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5918674-5918749:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6012504-6012645:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6071775-6071874:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6072334-6072432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6073231-6073276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6073895-6073935:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6079505-6079578:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6083136-6083205:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6084080-6084207:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6085421-6085532:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6094259-6094424:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6095057-6095184:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6105056-6105144:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6105420-6105464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6111541-6111616:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6117990-6118095:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6118738-6118820:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6119608-6119657:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6121740-6121809:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6123640-6123724:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6124662-6124801:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6126633-6126771:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6138257-6138321:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6230305-6230477:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6318917-6319100:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6324257-6324367:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6389733-6389807:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6393648-6393770:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6396145-6396223:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6412341-6412402:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6412908-6412964:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6415729-6415840:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6509364-6509448:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:6517873-6517977:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:6562523-6562614:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:6568979-6569076:1:exon

SHISA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: SHISA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6587737..6592665)
location: region:6587737-6592665:-1
so has part: feature:6587737-6592665:-1:exon
subclass of: SO_0000010

101516877
type: Gene
SIO_000068: ncbigene

position:6587737:-1
position: 6587737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6592665:-1
position: 6592665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6587737-6592665:-1:exon

SHISA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: SHISA2
product: shisa family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 5 Proteins
transcript id: XM_004577575.1
SIO_010081: SHISA2
subclass of: SO_0000673
so part of: SHISA2
location: complement(join(6587737..6588359,6592282..6592665))
location: region:6587737-6592665:-1
so has part: feature:6592282-6592665:-1:exon
so has part: feature:6587737-6588359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6592282-6592665:-1:exon

position:6592282:-1
position: 6592282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6587737-6588359:-1:exon

position:6588359:-1
position: 6588359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SHISA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: SHISA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein shisa-2 homolog
translation: MWGGRRSSAASSRNAASLLQLLLAALLAAGAQASGEYCHGWLDAQGVWRIGFQCPERFDGGDATICCGSCALRYCCSSAEARLDQGGCDNDRQQGAGEPGRADKDGPDGSAVPIYVPFLIVGSVFVAFIILGSLVAACCCRCLRPKQEPQQSRAPSGNRLMETIPMIPSASTSRGSSSRQSSTAASSSSSANSGARAPPTRSQTNCCLPEGAMNNVYVNMPTNFSVLNCQQATQIVPHQGQYLHPPFVGYPVQHDSVPVTPVPPFMDGLQPGYRQIQPSFPHTNSEQKMYPAVTV
SIO_010081: SHISA2
subclass of: SO_0000673
so part of: SHISA2
location: complement(join(6587806..6588359,6592282..6592615))
location: region:6587806-6592615:-1
so has part: feature:6592282-6592615:-1:exon
so has part: feature:6587806-6588359:-1:exon

XP_004577632.1
type: Protein
SIO_000068: ncbiprotein

position:6587806:-1
position: 6587806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6592615:-1
position: 6592615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6592282-6592615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6587806-6588359:-1:exon

LOC101535813
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101535813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6630802..6779474)
location: region:6630802-6779474:-1
so has part: feature:6630802-6779474:-1:exon
subclass of: SO_0000010

101535813
type: Gene
SIO_000068: ncbigene

position:6630802:-1
position: 6630802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6779474:-1
position: 6779474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6630802-6779474:-1:exon

LOC101535813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC101535813
product: phospholipid-transporting ATPase IB-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577703.3
SIO_010081: LOC101535813
subclass of: SO_0000673
so part of: LOC101535813
location: complement(join(6630802..6631129,6639361..6639422,6641280..6641378,6651053..6651141,6658779..6658886,6661399..6661455,6664389..6664450,6675249..6675327,6679135..6679257,6686037..6686111,6702889..6702999,6704302..6704485,6706975..6707147,6713665..6713729,6717484..6717622,6722102..6722241,6722751..6722835,6727193..6727262,6736006..6736055,6737505..6737587,6738151..6738256,6739045..6739117,6739855..6739893,6740132..6740220,6742535..6742612,6743984..6744111,6748418..6748580,6752325..6752436,6753306..6753433,6756655..6756724,6760986..6761059,6768788..6768828,6771053..6771098,6773136..6773234,6776424..6776523,6779374..6779474))
location: region:6630802-6779474:-1
so has part: feature:6779374-6779474:-1:exon
so has part: feature:6776424-6776523:-1:exon
so has part: feature:6773136-6773234:-1:exon
so has part: feature:6771053-6771098:-1:exon
so has part: feature:6768788-6768828:-1:exon
so has part: feature:6760986-6761059:-1:exon
so has part: feature:6756655-6756724:-1:exon
so has part: feature:6753306-6753433:-1:exon
so has part: feature:6752325-6752436:-1:exon
so has part: feature:6748418-6748580:-1:exon
so has part: feature:6743984-6744111:-1:exon
so has part: feature:6742535-6742612:-1:exon
so has part: feature:6740132-6740220:-1:exon
so has part: feature:6739855-6739893:-1:exon
so has part: feature:6739045-6739117:-1:exon
so has part: feature:6738151-6738256:-1:exon
so has part: feature:6737505-6737587:-1:exon
so has part: feature:6736006-6736055:-1:exon
so has part: feature:6727193-6727262:-1:exon
so has part: feature:6722751-6722835:-1:exon
so has part: feature:6722102-6722241:-1:exon
so has part: feature:6717484-6717622:-1:exon
so has part: feature:6713665-6713729:-1:exon
so has part: feature:6706975-6707147:-1:exon
so has part: feature:6704302-6704485:-1:exon
so has part: feature:6702889-6702999:-1:exon
so has part: feature:6686037-6686111:-1:exon
so has part: feature:6679135-6679257:-1:exon
so has part: feature:6675249-6675327:-1:exon
so has part: feature:6664389-6664450:-1:exon
so has part: feature:6661399-6661455:-1:exon
so has part: feature:6658779-6658886:-1:exon
so has part: feature:6651053-6651141:-1:exon
so has part: feature:6641280-6641378:-1:exon
so has part: feature:6639361-6639422:-1:exon
so has part: feature:6630802-6631129:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6779374-6779474:-1:exon

position:6779374:-1
position: 6779374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6776424-6776523:-1:exon

position:6776424:-1
position: 6776424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6776523:-1
position: 6776523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6773136-6773234:-1:exon

position:6773136:-1
position: 6773136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6773234:-1
position: 6773234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6771053-6771098:-1:exon

position:6771053:-1
position: 6771053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6771098:-1
position: 6771098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6768788-6768828:-1:exon

position:6768788:-1
position: 6768788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6768828:-1
position: 6768828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6760986-6761059:-1:exon

position:6760986:-1
position: 6760986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6761059:-1
position: 6761059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6756655-6756724:-1:exon

position:6756655:-1
position: 6756655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6756724:-1
position: 6756724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6753306-6753433:-1:exon

position:6753306:-1
position: 6753306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6753433:-1
position: 6753433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6752325-6752436:-1:exon

position:6752325:-1
position: 6752325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6752436:-1
position: 6752436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6748418-6748580:-1:exon

position:6748418:-1
position: 6748418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6748580:-1
position: 6748580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6743984-6744111:-1:exon

position:6743984:-1
position: 6743984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6744111:-1
position: 6744111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6742535-6742612:-1:exon

position:6742535:-1
position: 6742535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6742612:-1
position: 6742612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6740132-6740220:-1:exon

position:6740132:-1
position: 6740132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6740220:-1
position: 6740220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6739855-6739893:-1:exon

position:6739855:-1
position: 6739855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6739893:-1
position: 6739893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6739045-6739117:-1:exon

position:6739045:-1
position: 6739045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6739117:-1
position: 6739117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6738151-6738256:-1:exon

position:6738151:-1
position: 6738151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6738256:-1
position: 6738256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6737505-6737587:-1:exon

position:6737505:-1
position: 6737505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6737587:-1
position: 6737587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6736006-6736055:-1:exon

position:6736006:-1
position: 6736006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6736055:-1
position: 6736055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6727193-6727262:-1:exon

position:6727193:-1
position: 6727193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6727262:-1
position: 6727262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6722751-6722835:-1:exon

position:6722751:-1
position: 6722751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6722835:-1
position: 6722835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6722102-6722241:-1:exon

position:6722102:-1
position: 6722102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6722241:-1
position: 6722241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6717484-6717622:-1:exon

position:6717484:-1
position: 6717484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6717622:-1
position: 6717622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6713665-6713729:-1:exon

position:6713665:-1
position: 6713665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6713729:-1
position: 6713729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6706975-6707147:-1:exon

position:6706975:-1
position: 6706975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6707147:-1
position: 6707147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6704302-6704485:-1:exon

position:6704302:-1
position: 6704302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6704485:-1
position: 6704485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:6702889-6702999:-1:exon

position:6702889:-1
position: 6702889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6702999:-1
position: 6702999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:6686037-6686111:-1:exon

position:6686037:-1
position: 6686037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6686111:-1
position: 6686111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:6679135-6679257:-1:exon

position:6679135:-1
position: 6679135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6679257:-1
position: 6679257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:6675249-6675327:-1:exon

position:6675249:-1
position: 6675249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6675327:-1
position: 6675327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:6664389-6664450:-1:exon

position:6664389:-1
position: 6664389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6664450:-1
position: 6664450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:6661399-6661455:-1:exon

position:6661399:-1
position: 6661399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6661455:-1
position: 6661455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:6658779-6658886:-1:exon

position:6658779:-1
position: 6658779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6658886:-1
position: 6658886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:6651053-6651141:-1:exon

position:6651053:-1
position: 6651053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6651141:-1
position: 6651141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:6641280-6641378:-1:exon

position:6641280:-1
position: 6641280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6641378:-1
position: 6641378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:6639361-6639422:-1:exon

position:6639361:-1
position: 6639361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6639422:-1
position: 6639422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:6630802-6631129:-1:exon

position:6631129:-1
position: 6631129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101535813
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC101535813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IB-like
translation: MGWQRSFTGLETARVRVIYINDPLRNPFCLNWISTAKYSLWSFLPRYLYLQFSKAANAFFLFITILQQIPDVSPTGKYTTLLPLVVILTVSGIKEIIEDYRRHMADRLINTKSTIVLRQDSWNSIMWKEVSVGDIVKASNGEFLPADMLLISSSEAQSMCYVATSNLDGETNLKIRQALPDTADMQTEKQLSQLSGKIECEGPNCHFDTFVGTLYLPGKSPVSIGPDQVLLRGTQLRNTQWIIGIVIYAGFDTKFMQNSVKSPLKRSKVEKVTNVQILVLFMMLLVMALISFVGGVIWNQSYGANIWYLNNDVSAHSFALDILVFIILYHNLIPISLLVTLEIVKLIQALFINWDEDMHYKVNDVYAMARTSNLNEELGQVKYLFSDKTGTLTCNIMTFKKCTIAGIMYGESEPSDVITEENSQSPPITDTCEFNDPRLLENLKNGHPTEDYIREFLTLLSVCHTVFPESDGDNIIYQASSPDEAALVKGAKNLGYVFTARTPYSVTIDAMGQKCIFKILNILEFSSNRKRMSIIVRTPMGQLRLYCKGADSVIYQRLSKYSLFVKETLVHLEYFAKEGLRTLCLAYADLTEEEYQWWLNDYKMASVSLQDRIKKVEECYDKIEKKFLLLGATAIEDRLQAHVPETITTLLRANIKIWVLTGDKPETAINIAYSCKLISGHMPRIHLNTNSFEATKQVINQNCQELRKLLGKENEVALIVDGETLKYALRSEIRRNFLRLAVSCKAVLCCRLSPLQKAEIVDVVKRHVSAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYFRVTKCILYCFYKNVVLYVIELWFAFVNGFSGQIIFERWCISLYNVIFTSLPPLTLGIFERCCSKESLFKYPELYTISQTGEIFNTKVFWIQCMNALVHSFILFWFPVKMLQHDMVLQHGHTTDYLFLGNFIYTYVVVTVCLKAGLETMSWNKFSHLAIWGSIISWMVFFVVYSYFWPTVPIAPEMTGQANMALICPHFWLGFLIVPILCLIQNVLWKVLRNTYNKSFLEEVREMESSKSPERDLSKMPERRVKAPSLDVVFENTSVDLSAPRGYSFSQAERSVMTQEELVRSYNTERTKSKKSVNVGFTDDFPE
SIO_010081: LOC101535813
subclass of: SO_0000673
so part of: LOC101535813
location: complement(join(6630999..6631129,6639361..6639422,6641280..6641378,6651053..6651141,6658779..6658886,6661399..6661455,6664389..6664450,6675249..6675327,6679135..6679257,6686037..6686111,6702889..6702999,6704302..6704485,6706975..6707147,6713665..6713729,6717484..6717622,6722102..6722241,6722751..6722835,6727193..6727262,6736006..6736055,6737505..6737587,6738151..6738256,6739045..6739117,6739855..6739893,6740132..6740220,6742535..6742612,6743984..6744111,6748418..6748580,6752325..6752436,6753306..6753433,6756655..6756724,6760986..6761059,6768788..6768828,6771053..6771098,6773136..6773234,6776424..6776523,6779374..6779474))
location: region:6630999-6779474:-1
so has part: feature:6779374-6779474:-1:exon
so has part: feature:6776424-6776523:-1:exon
so has part: feature:6773136-6773234:-1:exon
so has part: feature:6771053-6771098:-1:exon
so has part: feature:6768788-6768828:-1:exon
so has part: feature:6760986-6761059:-1:exon
so has part: feature:6756655-6756724:-1:exon
so has part: feature:6753306-6753433:-1:exon
so has part: feature:6752325-6752436:-1:exon
so has part: feature:6748418-6748580:-1:exon
so has part: feature:6743984-6744111:-1:exon
so has part: feature:6742535-6742612:-1:exon
so has part: feature:6740132-6740220:-1:exon
so has part: feature:6739855-6739893:-1:exon
so has part: feature:6739045-6739117:-1:exon
so has part: feature:6738151-6738256:-1:exon
so has part: feature:6737505-6737587:-1:exon
so has part: feature:6736006-6736055:-1:exon
so has part: feature:6727193-6727262:-1:exon
so has part: feature:6722751-6722835:-1:exon
so has part: feature:6722102-6722241:-1:exon
so has part: feature:6717484-6717622:-1:exon
so has part: feature:6713665-6713729:-1:exon
so has part: feature:6706975-6707147:-1:exon
so has part: feature:6704302-6704485:-1:exon
so has part: feature:6702889-6702999:-1:exon
so has part: feature:6686037-6686111:-1:exon
so has part: feature:6679135-6679257:-1:exon
so has part: feature:6675249-6675327:-1:exon
so has part: feature:6664389-6664450:-1:exon
so has part: feature:6661399-6661455:-1:exon
so has part: feature:6658779-6658886:-1:exon
so has part: feature:6651053-6651141:-1:exon
so has part: feature:6641280-6641378:-1:exon
so has part: feature:6639361-6639422:-1:exon
so has part: feature:6630999-6631129:-1:exon

XP_004577760.3
type: Protein
SIO_000068: ncbiprotein

position:6630999:-1
position: 6630999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6779374-6779474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6776424-6776523:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6773136-6773234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6771053-6771098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6768788-6768828:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6760986-6761059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6756655-6756724:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6753306-6753433:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6752325-6752436:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6748418-6748580:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6743984-6744111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6742535-6742612:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6740132-6740220:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6739855-6739893:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6739045-6739117:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6738151-6738256:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6737505-6737587:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6736006-6736055:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6727193-6727262:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6722751-6722835:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6722102-6722241:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6717484-6717622:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6713665-6713729:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6706975-6707147:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6704302-6704485:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6702889-6702999:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6686037-6686111:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6679135-6679257:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6675249-6675327:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6664389-6664450:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6661399-6661455:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6658779-6658886:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6651053-6651141:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:6641280-6641378:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:6639361-6639422:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:6630999-6631129:-1:exon

LOC101536058
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101536058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6635654..6639231)
location: region:6635654-6639231:-1
so has part: feature:6635654-6639231:-1:exon

101536058
type: Gene
SIO_000068: ncbigene

position:6635654:-1
position: 6635654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6639231:-1
position: 6639231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6635654-6639231:-1:exon

LOC101536058
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101536058
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC101536058
subclass of: SO_0000673
so part of: LOC101536058
location: complement(6635654..6636325)
location: region:6635654-6636325:-1
so has part: feature:6635654-6636325:-1:exon

position:6636325:-1
position: 6636325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6635654-6636325:-1:exon

LOC101536058
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101536058
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC101536058
subclass of: SO_0000673
so part of: LOC101536058
location: complement(6639205..6639231)
location: region:6639205-6639231:-1
so has part: feature:6639205-6639231:-1:exon

position:6639205:-1
position: 6639205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6639205-6639231:-1:exon

LOC105941705
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC105941705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6761788..6766227
location: region:6761788-6766227:1
so has part: feature:6761788-6766227:1:exon

105941705
type: Gene
SIO_000068: ncbigene

position:6761788:1
position: 6761788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6766227:1
position: 6766227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6761788-6766227:1:exon

LOC105941705
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC105941705
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC105941705
subclass of: SO_0000673
so part of: LOC105941705
location: 6761788..6761895
location: region:6761788-6761895:1
so has part: feature:6761788-6761895:1:exon

position:6761895:1
position: 6761895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6761788-6761895:1:exon

LOC105941705
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC105941705
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC105941705
subclass of: SO_0000673
so part of: LOC105941705
location: 6765420..6766227
location: region:6765420-6766227:1
so has part: feature:6765420-6766227:1:exon

position:6765420:1
position: 6765420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6765420-6766227:1:exon

RNF6
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RNF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6812677..6822838)
location: region:6812677-6822838:-1
so has part: feature:6812677-6822838:-1:exon
subclass of: SO_0000010

101516627
type: Gene
SIO_000068: ncbigene

position:6812677:-1
position: 6812677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6822838:-1
position: 6822838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6812677-6822838:-1:exon

RNF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RNF6
product: ring finger protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577574.2
SIO_010081: RNF6
subclass of: SO_0000673
so part of: RNF6
location: complement(join(6812677..6815434,6818783..6818887,6820586..6820788,6822413..6822495,6822775..6822838))
location: region:6812677-6822838:-1
so has part: feature:6822775-6822838:-1:exon
so has part: feature:6822413-6822495:-1:exon
so has part: feature:6820586-6820788:-1:exon
so has part: feature:6818783-6818887:-1:exon
so has part: feature:6812677-6815434:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6822775-6822838:-1:exon

position:6822775:-1
position: 6822775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6822413-6822495:-1:exon

position:6822413:-1
position: 6822413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6822495:-1
position: 6822495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6820586-6820788:-1:exon

position:6820586:-1
position: 6820586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6820788:-1
position: 6820788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6818783-6818887:-1:exon

position:6818783:-1
position: 6818783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6818887:-1
position: 6818887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6812677-6815434:-1:exon

position:6815434:-1
position: 6815434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RNF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF6
translation: MNQSGSGPDGGGEEVSSRDHRHHENETRWQQERLHREEAYYQFINELNDEDYRLMRDHNLLGTPGEITSEELQQRLDGVKERLASQPDPRTAPSSSGNAVPGESSNEESLLEWLNTFRRTGNATRSGQNGNQTWRAVSRTNPNSGEFRFSLEIHINHENRGLEIDGEDYMHIPLSDTNRDHTRTRQQRSTSPVARRTRSQTSVNFSGGSSNSVRTRRGSRGQNSGEGSFSTLGRLRNGIRGTVGTPRTNASRPNFNSAHQSGGSELGQREGQRFGAAHVWENGARSNVTVRNTNQRLEPIRLRSTSGSRSRSPIQRQSGTVSHDSPREGRPLQQSTRRSVRRGRGVTRVFVEQDRGRRAAAYTPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITLDLQVRRIRPGENRDRDSIANRTRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSSTALRSILRQIMTGFGELSSLMEAESESEIQRHDQHLPEMHSELSNFATAHDNSQHSEGSSQDLRVQDDSIEMDAENEGTQPHTHNRDRRAGRQLRNSNNLVETGTLPILRLAHFFLLNEGDDDDRIRGLTKEQIDNLSTRNFEHNNVDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSSLANDG
SIO_010081: RNF6
subclass of: SO_0000673
so part of: RNF6
location: complement(join(6813681..6815434,6818783..6818887,6820586..6820778))
location: region:6813681-6820778:-1
so has part: feature:6820586-6820778:-1:exon
so has part: feature:6818783-6818887:-1:exon
so has part: feature:6813681-6815434:-1:exon

XP_004577631.1
type: Protein
SIO_000068: ncbiprotein

position:6813681:-1
position: 6813681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6820778:-1
position: 6820778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6820586-6820778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6818783-6818887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6813681-6815434:-1:exon

CDK8
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CDK8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6848352..6966370
location: region:6848352-6966370:1
so has part: feature:6848352-6966370:1:exon
subclass of: SO_0000010

101535579
type: Gene
SIO_000068: ncbigene

position:6848352:1
position: 6848352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6966370:1
position: 6966370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6848352-6966370:1:exon

CDK8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CDK8
product: cyclin dependent kinase 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493493.1
SIO_010081: CDK8
subclass of: SO_0000673
so part of: CDK8
location: join(6848352..6848479,6848882..6848975,6898325..6898435,6905125..6905265,6941896..6941953,6944211..6944342,6950321..6950464,6952821..6952890,6953610..6953682,6961439..6961536,6962570..6962648,6962751..6962906,6965090..6966370)
location: region:6848352-6966370:1
so has part: feature:6848352-6848479:1:exon
so has part: feature:6848882-6848975:1:exon
so has part: feature:6898325-6898435:1:exon
so has part: feature:6905125-6905265:1:exon
so has part: feature:6941896-6941953:1:exon
so has part: feature:6944211-6944342:1:exon
so has part: feature:6950321-6950464:1:exon
so has part: feature:6952821-6952890:1:exon
so has part: feature:6953610-6953682:1:exon
so has part: feature:6961439-6961536:1:exon
so has part: feature:6962570-6962648:1:exon
so has part: feature:6962751-6962906:1:exon
so has part: feature:6965090-6966370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6848352-6848479:1:exon

position:6848479:1
position: 6848479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6848882-6848975:1:exon

position:6848882:1
position: 6848882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6848975:1
position: 6848975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6898325-6898435:1:exon

position:6898325:1
position: 6898325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6898435:1
position: 6898435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6905125-6905265:1:exon

position:6905125:1
position: 6905125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6905265:1
position: 6905265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6941896-6941953:1:exon

position:6941896:1
position: 6941896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6941953:1
position: 6941953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6944211-6944342:1:exon

position:6944211:1
position: 6944211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6944342:1
position: 6944342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6950321-6950464:1:exon

position:6950321:1
position: 6950321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6950464:1
position: 6950464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6952821-6952890:1:exon

position:6952821:1
position: 6952821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6952890:1
position: 6952890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6953610-6953682:1:exon

position:6953610:1
position: 6953610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6953682:1
position: 6953682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6961439-6961536:1:exon

position:6961439:1
position: 6961439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6961536:1
position: 6961536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6962570-6962648:1:exon

position:6962570:1
position: 6962570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6962648:1
position: 6962648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6962751-6962906:1:exon

position:6962751:1
position: 6962751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6962906:1
position: 6962906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6965090-6966370:1:exon

position:6965090:1
position: 6965090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDK8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CDK8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 8
translation: MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGVLSVQKKVLLERSSVVTGHPDEAVAISLSLALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGDKNQQQQQGNNHTNGTGHPGNQESSHTQGPPLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSATSQQPPQYSHQTHRY
SIO_010081: CDK8
subclass of: SO_0000673
so part of: CDK8
location: join(6848352..6848479,6848882..6848975,6898325..6898435,6905125..6905265,6941896..6941953,6944211..6944342,6950321..6950464,6952821..6952890,6953610..6953682,6961439..6961536,6962570..6962648,6962751..6962906,6965090..6965215)
location: region:6848352-6965215:1
so has part: feature:6848352-6848479:1:exon
so has part: feature:6848882-6848975:1:exon
so has part: feature:6898325-6898435:1:exon
so has part: feature:6905125-6905265:1:exon
so has part: feature:6941896-6941953:1:exon
so has part: feature:6944211-6944342:1:exon
so has part: feature:6950321-6950464:1:exon
so has part: feature:6952821-6952890:1:exon
so has part: feature:6953610-6953682:1:exon
so has part: feature:6961439-6961536:1:exon
so has part: feature:6962570-6962648:1:exon
so has part: feature:6962751-6962906:1:exon
so has part: feature:6965090-6965215:1:exon

XP_036349386.1
type: Protein
SIO_000068: ncbiprotein

position:6965215:1
position: 6965215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6848352-6848479:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6848882-6848975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6898325-6898435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6905125-6905265:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6941896-6941953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6944211-6944342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6950321-6950464:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6952821-6952890:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6953610-6953682:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6961439-6961536:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6962570-6962648:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6962751-6962906:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6965090-6965215:1:exon

WASF3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7144139..7199514
location: region:7144139-7199514:1
so has part: feature:7144139-7199514:1:exon
subclass of: SO_0000010

101516232
type: Gene
SIO_000068: ncbigene

position:7144139:1
position: 7144139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7199514:1
position: 7199514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7144139-7199514:1:exon

WASF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: WASF3
product: WASP family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 5 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577572.1
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(7144139..7144235,7161675..7161817,7178351..7178485,7180701..7180854,7183488..7183605,7188152..7188327,7192680..7192946,7197312..7197682,7199015..7199514)
location: region:7144139-7199514:1
so has part: feature:7144139-7144235:1:exon
so has part: feature:7161675-7161817:1:exon
so has part: feature:7178351-7178485:1:exon
so has part: feature:7180701-7180854:1:exon
so has part: feature:7183488-7183605:1:exon
so has part: feature:7188152-7188327:1:exon
so has part: feature:7192680-7192946:1:exon
so has part: feature:7197312-7197682:1:exon
so has part: feature:7199015-7199514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7144139-7144235:1:exon

position:7144235:1
position: 7144235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7161675-7161817:1:exon

position:7161675:1
position: 7161675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7161817:1
position: 7161817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7178351-7178485:1:exon

position:7178351:1
position: 7178351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7178485:1
position: 7178485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7180701-7180854:1:exon

position:7180701:1
position: 7180701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7180854:1
position: 7180854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7183488-7183605:1:exon

position:7183488:1
position: 7183488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7183605:1
position: 7183605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7188152-7188327:1:exon

position:7188152:1
position: 7188152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7188327:1
position: 7188327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7192680-7192946:1:exon

position:7192680:1
position: 7192680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7192946:1
position: 7192946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7197312-7197682:1:exon

position:7197312:1
position: 7197312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7197682:1
position: 7197682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7199015-7199514:1:exon

position:7199015:1
position: 7199015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WASF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: WASF3
product: WASP family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577573.1
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(7144139..7144235,7161675..7161817,7178351..7178485,7180701..7180854,7183488..7183605,7191680..7191846,7192680..7192946,7197312..7197682,7199015..7199514)
location: region:7144139-7199514:1
so has part: feature:7144139-7144235:1:exon
so has part: feature:7161675-7161817:1:exon
so has part: feature:7178351-7178485:1:exon
so has part: feature:7180701-7180854:1:exon
so has part: feature:7183488-7183605:1:exon
so has part: feature:7191680-7191846:1:exon
so has part: feature:7192680-7192946:1:exon
so has part: feature:7197312-7197682:1:exon
so has part: feature:7199015-7199514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7144139-7144235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7161675-7161817:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7178351-7178485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7180701-7180854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7183488-7183605:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7191680-7191846:1:exon

position:7191680:1
position: 7191680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7191846:1
position: 7191846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7192680-7192946:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7197312-7197682:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7199015-7199514:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X1
translation: MPLVKRNIEPRHLCRGALPEGVSSELECVTNSTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTVQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVYHGASSEGSLSPDTRSHASDVTDYSYPATPNHSLHPQPGTPSYAAADAAPHGPASQAPEHEYRPPSASARHMALNRPQQPPPPPPPQAPEGSQASAPMASADFGMLPAQIIEYYNPSGPPPPPPPPMIPSAQTAFVSPLQVPVQPAFPASASSTYSTPPHPVPATGLLVTAPPPPGPPPPPPGPPGPGSSLSSSPLHGPPVAEAKRPEPAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKRGPVGDDVATILSRRIAVEYSDSDDDSEFDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(7161685..7161817,7178351..7178485,7180701..7180854,7183488..7183605,7188152..7188327,7192680..7192946,7197312..7197682,7199015..7199172)
location: region:7161685-7199172:1
so has part: feature:7161685-7161817:1:exon
so has part: feature:7178351-7178485:1:exon
so has part: feature:7180701-7180854:1:exon
so has part: feature:7183488-7183605:1:exon
so has part: feature:7188152-7188327:1:exon
so has part: feature:7192680-7192946:1:exon
so has part: feature:7197312-7197682:1:exon
so has part: feature:7199015-7199172:1:exon

XP_004577629.1
type: Protein
SIO_000068: ncbiprotein

position:7161685:1
position: 7161685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7199172:1
position: 7199172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7161685-7161817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7178351-7178485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7180701-7180854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7183488-7183605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7188152-7188327:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7192680-7192946:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7197312-7197682:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7199015-7199172:1:exon

WASF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: WASF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3 isoform X2
translation: MPLVKRNIEPRHLCRGALPEGVSSELECVTNSTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSSTVQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKREKHKLNPPRNRQVHVRKVRTRREEWERRKMGIEFMSDAKRLEQAGSAEEDRVPGGSHASDVTDYSYPATPNHSLHPQPGTPSYAAADAAPHGPASQAPEHEYRPPSASARHMALNRPQQPPPPPPPQAPEGSQASAPMASADFGMLPAQIIEYYNPSGPPPPPPPPMIPSAQTAFVSPLQVPVQPAFPASASSTYSTPPHPVPATGLLVTAPPPPGPPPPPPGPPGPGSSLSSSPLHGPPVAEAKRPEPAQPPISDARSDLLAAIRMGIQLKKVQEQREQEAKRGPVGDDVATILSRRIAVEYSDSDDDSEFDENDWSD
SIO_010081: WASF3
subclass of: SO_0000673
so part of: WASF3
location: join(7161685..7161817,7178351..7178485,7180701..7180854,7183488..7183605,7191680..7191846,7192680..7192946,7197312..7197682,7199015..7199172)
location: region:7161685-7199172:1
so has part: feature:7161685-7161817:1:exon
so has part: feature:7178351-7178485:1:exon
so has part: feature:7180701-7180854:1:exon
so has part: feature:7183488-7183605:1:exon
so has part: feature:7191680-7191846:1:exon
so has part: feature:7192680-7192946:1:exon
so has part: feature:7197312-7197682:1:exon
so has part: feature:7199015-7199172:1:exon

XP_004577630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7161685-7161817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7178351-7178485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7180701-7180854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7183488-7183605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7191680-7191846:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7192680-7192946:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7197312-7197682:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7199015-7199172:1:exon

GPR12
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: GPR12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7244176..7245253)
location: region:7244176-7245253:-1
so has part: feature:7244176-7245253:-1:exon
subclass of: SO_0000010

101515987
type: Gene
SIO_000068: ncbigene

position:7244176:-1
position: 7244176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7245253:-1
position: 7245253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7244176-7245253:-1:exon

GPR12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GPR12
product: G protein-coupled receptor 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 16 Proteins
transcript id: XM_004577571.1
SIO_010081: GPR12
subclass of: SO_0000673
so part of: GPR12
location: complement(7244176..7245253)
location: region:7244176-7245253:-1
so has part: feature:7244176-7245253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7244176-7245253:-1:exon

GPR12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GPR12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 12
translation: MNEDLKVNVSGLPQDYIDAGAPENVSTAASSSQVPAVEPEPELVVNPWDIVLCTSGTLISCENAIVVLIIFHNPSLRAPMFLLIGSLALADLLAGLGLIINFVFAYLLQSDATKLVTIGLIVASFSASVCSLLAITVDRYLSLYYALTYHSERTVTFTYAMLVMLWGTSICLGLLPILGWNCLRDESTCSVVRPLTKNNAAILSVSFLFMFALMLQLYVQICKIVMRHAHQIALQHHFLATSHYVTTRKGVSTLAIILGTFAACWMPFTLYSLIADYTYPSIYTYATLLPATYNSIINPVIYAFRNQEIQKALCLVCCGCIPPSLSQRVRSPSDV
SIO_010081: GPR12
subclass of: SO_0000673
so part of: GPR12
location: complement(7244177..7245184)
location: region:7244177-7245184:-1
so has part: feature:7244177-7245184:-1:exon

XP_004577628.1
type: Protein
SIO_000068: ncbiprotein

position:7244177:-1
position: 7244177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7245184:-1
position: 7245184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7244177-7245184:-1:exon

LOC101535329
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC101535329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7267672..7268123)
location: region:7267672-7268123:-1
so has part: feature:7267672-7268123:-1:exon

101535329
type: Gene
SIO_000068: ncbigene

position:7267672:-1
position: 7267672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7268123:-1
position: 7268123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7267672-7268123:-1:exon

LOC101535329
type: Exon
subclass of: SO_0000147
RO_0002162: 9978
gene: LOC101535329
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC101535329
subclass of: SO_0000673
so part of: LOC101535329
location: complement(7267672..7268123)
location: region:7267672-7268123:-1
so has part: feature:7267672-7268123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7267672-7268123:-1:exon

USP12
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: USP12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7532156..7572966)
location: region:7532156-7572966:-1
so has part: feature:7532156-7572966:-1:exon
subclass of: SO_0000010

101535080
type: Gene
SIO_000068: ncbigene

position:7532156:-1
position: 7532156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7572966:-1
position: 7572966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7532156-7572966:-1:exon

USP12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: USP12
product: ubiquitin specific peptidase 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 18 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004577701.3
SIO_010081: USP12
subclass of: SO_0000673
so part of: USP12
location: complement(join(7532156..7533197,7534195..7534273,7537594..7537791,7549494..7549577,7549699..7549775,7552979..7553208,7563377..7563590,7572891..7572966))
location: region:7532156-7572966:-1
so has part: feature:7572891-7572966:-1:exon
so has part: feature:7563377-7563590:-1:exon
so has part: feature:7552979-7553208:-1:exon
so has part: feature:7549699-7549775:-1:exon
so has part: feature:7549494-7549577:-1:exon
so has part: feature:7537594-7537791:-1:exon
so has part: feature:7534195-7534273:-1:exon
so has part: feature:7532156-7533197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7572891-7572966:-1:exon

position:7572891:-1
position: 7572891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7563377-7563590:-1:exon

position:7563377:-1
position: 7563377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7563590:-1
position: 7563590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7552979-7553208:-1:exon

position:7552979:-1
position: 7552979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7553208:-1
position: 7553208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7549699-7549775:-1:exon

position:7549699:-1
position: 7549699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7549775:-1
position: 7549775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7549494-7549577:-1:exon

position:7549494:-1
position: 7549494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7549577:-1
position: 7549577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7537594-7537791:-1:exon

position:7537594:-1
position: 7537594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7537791:-1
position: 7537791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7534195-7534273:-1:exon

position:7534195:-1
position: 7534195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7534273:-1
position: 7534273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7532156-7533197:-1:exon

position:7533197:-1
position: 7533197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USP12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: USP12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 12
translation: MQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQSRD
SIO_010081: USP12
subclass of: SO_0000673
so part of: USP12
location: complement(join(7533096..7533197,7534195..7534273,7537594..7537791,7549494..7549577,7549699..7549775,7552979..7553191))
location: region:7533096-7553191:-1
so has part: feature:7552979-7553191:-1:exon
so has part: feature:7549699-7549775:-1:exon
so has part: feature:7549494-7549577:-1:exon
so has part: feature:7537594-7537791:-1:exon
so has part: feature:7534195-7534273:-1:exon
so has part: feature:7533096-7533197:-1:exon

XP_004577758.2
type: Protein
SIO_000068: ncbiprotein

position:7533096:-1
position: 7533096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7553191:-1
position: 7553191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7552979-7553191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7549699-7549775:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7549494-7549577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7537594-7537791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7534195-7534273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7533096-7533197:-1:exon

RPL21
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RPL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7692519..7695515
location: region:7692519-7695515:1
so has part: feature:7692519-7695515:1:exon
subclass of: SO_0000010

101536548
type: Gene
SIO_000068: ncbigene

position:7692519:1
position: 7692519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7695515:1
position: 7695515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7692519-7695515:1:exon

RPL21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RPL21
product: ribosomal protein L21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004577570.2
SIO_010081: RPL21
subclass of: SO_0000673
so part of: RPL21
location: join(7692519..7692551,7693986..7694064,7694253..7694314,7694660..7694772,7695243..7695515)
location: region:7692519-7695515:1
so has part: feature:7692519-7692551:1:exon
so has part: feature:7693986-7694064:1:exon
so has part: feature:7694253-7694314:1:exon
so has part: feature:7694660-7694772:1:exon
so has part: feature:7695243-7695515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7692519-7692551:1:exon

position:7692551:1
position: 7692551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7693986-7694064:1:exon

position:7693986:1
position: 7693986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7694064:1
position: 7694064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7694253-7694314:1:exon

position:7694253:1
position: 7694253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7694314:1
position: 7694314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7694660-7694772:1:exon

position:7694660:1
position: 7694660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7694772:1
position: 7694772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7695243-7695515:1:exon

position:7695243:1
position: 7695243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RPL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L21
translation: MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRISVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA
SIO_010081: RPL21
subclass of: SO_0000673
so part of: RPL21
location: join(7693998..7694064,7694253..7694314,7694660..7694772,7695243..7695483)
location: region:7693998-7695483:1
so has part: feature:7693998-7694064:1:exon
so has part: feature:7694253-7694314:1:exon
so has part: feature:7694660-7694772:1:exon
so has part: feature:7695243-7695483:1:exon

XP_004577627.1
type: Protein
SIO_000068: ncbiprotein

position:7693998:1
position: 7693998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7695483:1
position: 7695483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7693998-7694064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7694253-7694314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7694660-7694772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7695243-7695483:1:exon

LOC118758047
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758047
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7694466..7694537
location: region:7694466-7694537:1
so has part: feature:7694466-7694537:1:exon
subclass of: SO_0000578

118758047
type: Gene
SIO_000068: ncbigene

position:7694466:1
position: 7694466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7694537:1
position: 7694537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7694466-7694537:1:exon

LOC118758047
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118758047
product: small nucleolar RNA SNORD102
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00187
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995502.1
SIO_010081: LOC118758047
subclass of: SO_0000673
so part of: LOC118758047
location: 7694466..7694537
location: region:7694466-7694537:1
so has part: feature:7694466-7694537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7694466-7694537:1:exon

LOC118758049
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758049
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7694815..7694944
location: region:7694815-7694944:1
so has part: feature:7694815-7694944:1:exon
subclass of: SO_0000578

118758049
type: Gene
SIO_000068: ncbigene

position:7694815:1
position: 7694815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7694944:1
position: 7694944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7694815-7694944:1:exon

LOC118758049
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snoRNA
gene: LOC118758049
product: small nucleolar RNA SNORA27
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00443
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995504.1
SIO_010081: LOC118758049
subclass of: SO_0000673
so part of: LOC118758049
location: 7694815..7694944
location: region:7694815-7694944:1
so has part: feature:7694815-7694944:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7694815-7694944:1:exon

RASL11A
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: RASL11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7707254..7709313
location: region:7707254-7709313:1
so has part: feature:7707254-7709313:1:exon
subclass of: SO_0000010

101536301
type: Gene
SIO_000068: ncbigene

position:7707254:1
position: 7707254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7709313:1
position: 7709313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7707254-7709313:1:exon

RASL11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: RASL11A
product: RAS like family 11 member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_004577569.3
SIO_010081: RASL11A
subclass of: SO_0000673
so part of: RASL11A
location: join(7707254..7707377,7707640..7707696,7707800..7707879,7708843..7709313)
location: region:7707254-7709313:1
so has part: feature:7707254-7707377:1:exon
so has part: feature:7707640-7707696:1:exon
so has part: feature:7707800-7707879:1:exon
so has part: feature:7708843-7709313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7707254-7707377:1:exon

position:7707377:1
position: 7707377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7707640-7707696:1:exon

position:7707640:1
position: 7707640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7707696:1
position: 7707696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7707800-7707879:1:exon

position:7707800:1
position: 7707800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7707879:1
position: 7707879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7708843-7709313:1:exon

position:7708843:1
position: 7708843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RASL11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: RASL11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-like protein family member 11A
translation: MRPPNMSGHFLLAPIPESTSDYLLPKDIKLAVLGASRVGKSAMIVRFLTKRFIGDYEPNTGKLYSRLVYVEGDQLSLQIQDTPGGIQTQDNLNQQPVDSLSKYLHWAEGFLLVYSITDCDSYRAIRPLYQHIRKVHPESKAPVIIVANKGDLHHLRQVQTQDGVQLANELGSLFLEISTSENYEDVCEVFQHLCKEVSKVHGLGGERRRSSVIPRPRSPNMQDLKRRFKQALSSKVKAASTLG
SIO_010081: RASL11A
subclass of: SO_0000673
so part of: RASL11A
location: join(7707254..7707377,7707640..7707696,7707800..7707879,7708843..7709313)
location: region:7707254-7709313:1
so has part: feature:7707254-7707377:1:exon
so has part: feature:7707640-7707696:1:exon
so has part: feature:7707800-7707879:1:exon
so has part: feature:7708843-7709313:1:exon

XP_004577626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7707254-7707377:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7707640-7707696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7707800-7707879:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7708843-7709313:1:exon

MTIF3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: MTIF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7837232..7843880)
location: region:7837232-7843880:-1
so has part: feature:7837232-7843880:-1:exon
subclass of: SO_0000010

101534834
type: Gene
SIO_000068: ncbigene

position:7837232:-1
position: 7837232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7843880:-1
position: 7843880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7837232-7843880:-1:exon

MTIF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: MTIF3
product: mitochondrial translational initiation factor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493494.1
SIO_010081: MTIF3
subclass of: SO_0000673
so part of: MTIF3
location: complement(join(7837232..7837293,7837738..7838198,7843776..7843880))
location: region:7837232-7843880:-1
so has part: feature:7843776-7843880:-1:exon
so has part: feature:7837738-7838198:-1:exon
so has part: feature:7837232-7837293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7843776-7843880:-1:exon

position:7843776:-1
position: 7843776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7837738-7838198:-1:exon

position:7837738:-1
position: 7837738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7838198:-1
position: 7838198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7837232-7837293:-1:exon

position:7837293:-1
position: 7837293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTIF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: MTIF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-3, mitochondrial
translation: MAALLKQLMLQTVKTENHCIRRCFGQPLVTKVGPTTLCLLASAPRPSYLIHARAFGTAEDTQEERKKTKRNETDFSNVGRKIKERIIQVLDEEGNDLGNMHRADVIRLMDERELRLVKRDAQAEPPRYQLMTGLQIHQERLRLREMEKARPKAVWVVTLIDVSGPSPDETPVV
SIO_010081: MTIF3
subclass of: SO_0000673
so part of: MTIF3
location: complement(join(7837232..7837293,7837738..7838197))
location: region:7837232-7838197:-1
so has part: feature:7837738-7838197:-1:exon
so has part: feature:7837232-7837293:-1:exon

XP_036349387.1
type: Protein
SIO_000068: ncbiprotein

position:7838197:-1
position: 7838197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7837738-7838197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7837232-7837293:-1:exon

LNX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7896144..7946110)
location: region:7896144-7946110:-1
so has part: feature:7896144-7946110:-1:exon
subclass of: SO_0000010

101536057
type: Gene
SIO_000068: ncbigene

position:7896144:-1
position: 7896144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7946110:-1
position: 7946110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7896144-7946110:-1:exon

LNX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LNX2
product: ligand of numb-protein X 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_004577568.1
SIO_010081: LNX2
subclass of: SO_0000673
so part of: LNX2
location: complement(join(7896144..7896279,7898000..7898158,7899971..7900202,7902995..7903172,7906869..7907012,7912951..7913319,7918650..7918849,7919896..7920143,7945704..7946110))
location: region:7896144-7946110:-1
so has part: feature:7945704-7946110:-1:exon
so has part: feature:7919896-7920143:-1:exon
so has part: feature:7918650-7918849:-1:exon
so has part: feature:7912951-7913319:-1:exon
so has part: feature:7906869-7907012:-1:exon
so has part: feature:7902995-7903172:-1:exon
so has part: feature:7899971-7900202:-1:exon
so has part: feature:7898000-7898158:-1:exon
so has part: feature:7896144-7896279:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7945704-7946110:-1:exon

position:7945704:-1
position: 7945704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7919896-7920143:-1:exon

position:7919896:-1
position: 7919896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7920143:-1
position: 7920143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7918650-7918849:-1:exon

position:7918650:-1
position: 7918650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7918849:-1
position: 7918849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7912951-7913319:-1:exon

position:7912951:-1
position: 7912951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7913319:-1
position: 7913319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7906869-7907012:-1:exon

position:7906869:-1
position: 7906869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7907012:-1
position: 7907012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7902995-7903172:-1:exon

position:7902995:-1
position: 7902995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7903172:-1
position: 7903172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7899971-7900202:-1:exon

position:7899971:-1
position: 7899971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7900202:-1
position: 7900202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7898000-7898158:-1:exon

position:7898000:-1
position: 7898000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7898158:-1
position: 7898158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7896144-7896279:-1:exon

position:7896279:-1
position: 7896279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LNX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LNX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand of Numb protein X 2
translation: MGTASGEMVSVEQTSSSSLNPLCFECGQQHWTKENHLYNYQNEVDDDLVCHICLQPLLLPLDTPCGHTFCYKCLRNFLQEKDFCPLDRKRLHFKLCKKSSILVHKLLDKLLVSCPFSSVCQDVMQRCDLEAHLKNRCPGASHRRVSLERRKTNKTQAENENENGPTIIDAPGTLLPETDCPGPGPLATERNSTSAALPVWTEEPGLDNPAFEESAGPDTIQQPLSLPEGEITTIEIHRSNPYIQLGISIVGGNETPLINIVIQEVYRDGIIARDGRLLAGDQILQVNNYNISNVSHNYARAVLSQPCSTLQLTVLRERRFGSRAHSHSDGTSPREEIFQVVLHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKHGTPELAAQIIQASGERVNLTIARQGKAQPGNPAREAATHSGSSQHHSQSLYPNRPTSHKDLTQCVTCQEKHITVKKEPHESLGMTVAGGRGSKSGELPIFVTSVPPHGCLARDGRIKRGDILLNINGIDLTNLTHSEAVAVLKASAASPAVVLKALEVQVVEDAAQTLEEQPSTVSENEYDASWSPSWVMWLGLPSALHSCHDIVLRRSYLGSWGFSIVGGYEENHTNQPFFIKTIVLGTPAYYDGRLKCGDMIVAVNGLSTVGMSHSALVPMLKEQRNKVTLTVICWPGSLV
SIO_010081: LNX2
subclass of: SO_0000673
so part of: LNX2
location: complement(join(7896144..7896279,7898000..7898158,7899971..7900202,7902995..7903172,7906869..7907012,7912951..7913319,7918650..7918849,7919896..7920143,7945704..7946110))
location: region:7896144-7946110:-1
so has part: feature:7945704-7946110:-1:exon
so has part: feature:7919896-7920143:-1:exon
so has part: feature:7918650-7918849:-1:exon
so has part: feature:7912951-7913319:-1:exon
so has part: feature:7906869-7907012:-1:exon
so has part: feature:7902995-7903172:-1:exon
so has part: feature:7899971-7900202:-1:exon
so has part: feature:7898000-7898158:-1:exon
so has part: feature:7896144-7896279:-1:exon

XP_004577625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7945704-7946110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7919896-7920143:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7918650-7918849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7912951-7913319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7906869-7907012:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7902995-7903172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7899971-7900202:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7898000-7898158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7896144-7896279:-1:exon

POLR1D
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: POLR1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7981696..7983302
location: region:7981696-7983302:1
so has part: feature:7981696-7983302:1:exon
subclass of: SO_0000010

101535812
type: Gene
SIO_000068: ncbigene

position:7981696:1
position: 7981696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7983302:1
position: 7983302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7981696-7983302:1:exon

POLR1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: POLR1D
product: RNA polymerase I and III subunit D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_004577567.2
SIO_010081: POLR1D
subclass of: SO_0000673
so part of: POLR1D
location: join(7981696..7981837,7982729..7983302)
location: region:7981696-7983302:1
so has part: feature:7981696-7981837:1:exon
so has part: feature:7982729-7983302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7981696-7981837:1:exon

position:7981837:1
position: 7981837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7982729-7983302:1:exon

position:7982729:1
position: 7982729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POLR1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: POLR1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerases I and III subunit RPAC2
translation: MEEDQELERKMSGLKTSVAEGERKTALEMVQAAGTDRCCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSENKINLRIQTRGALPAVETFQRGLNELMNVCQHVLDKFEASIQHYKEQKASKSESTF
SIO_010081: POLR1D
subclass of: SO_0000673
so part of: POLR1D
location: join(7981812..7981837,7982729..7983104)
location: region:7981812-7983104:1
so has part: feature:7981812-7981837:1:exon
so has part: feature:7982729-7983104:1:exon

XP_004577624.1
type: Protein
SIO_000068: ncbiprotein

position:7981812:1
position: 7981812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7983104:1
position: 7983104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7981812-7981837:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7982729-7983104:1:exon

LOC118758010
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8008146..8027725
location: region:8008146-8027725:1
so has part: feature:8008146-8027725:1:exon
subclass of: SO_0000010

118758010
type: Gene
SIO_000068: ncbigene

position:8008146:1
position: 8008146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8027725:1
position: 8027725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8008146-8027725:1:exon

LOC118758010
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: LOC118758010
product: protein POLR1D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_036493495.1
SIO_010081: LOC118758010
subclass of: SO_0000673
so part of: LOC118758010
location: join(8008146..8008168,8012862..8012936,8027458..8027725)
location: region:8008146-8027725:1
so has part: feature:8008146-8008168:1:exon
so has part: feature:8012862-8012936:1:exon
so has part: feature:8027458-8027725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8008146-8008168:1:exon

position:8008168:1
position: 8008168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8012862-8012936:1:exon

position:8012862:1
position: 8012862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8012936:1
position: 8012936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8027458-8027725:1:exon

position:8027458:1
position: 8027458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118758010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: LOC118758010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein POLR1D-like
translation: MVLQFSKKKAIEELLKEAKRGKTRAETMGPMGWMKCPLAGTNKRFLINTIKNTLPSHKEQDHEQKEGNKEPAKDQDQKEANSKQHRSHAHKRSWHSRSSSRHSPPHKRRTQDKHEARASRR
SIO_010081: LOC118758010
subclass of: SO_0000673
so part of: LOC118758010
location: join(8008146..8008168,8012862..8012936,8027458..8027725)
location: region:8008146-8027725:1
so has part: feature:8008146-8008168:1:exon
so has part: feature:8012862-8012936:1:exon
so has part: feature:8027458-8027725:1:exon

XP_036349388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8008146-8008168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8012862-8012936:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8027458-8027725:1:exon

GSX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: GSX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8140983..8142271
location: region:8140983-8142271:1
so has part: feature:8140983-8142271:1:exon
subclass of: SO_0000010

101535417
type: Gene
SIO_000068: ncbigene

position:8140983:1
position: 8140983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8142271:1
position: 8142271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8140983-8142271:1:exon

GSX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GSX1
product: GS homeobox 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins
transcript id: XM_004577566.1
SIO_010081: GSX1
subclass of: SO_0000673
so part of: GSX1
location: join(8140983..8141401,8141854..8142093,8142127..8142271)
location: region:8140983-8142271:1
so has part: feature:8140983-8141401:1:exon
so has part: feature:8141854-8142093:1:exon
so has part: feature:8142127-8142271:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8140983-8141401:1:exon

position:8141401:1
position: 8141401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8141854-8142093:1:exon

position:8141854:1
position: 8141854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8142093:1
position: 8142093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8142127-8142271:1:exon

position:8142127:1
position: 8142127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GSX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: GSX1
product: GS homeobox 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins
transcript id: XM_004577565.1
SIO_010081: GSX1
subclass of: SO_0000673
so part of: GSX1
location: join(8140983..8141401,8141854..8142269)
location: region:8140983-8142269:1
so has part: feature:8140983-8141401:1:exon
so has part: feature:8141854-8142269:1:exon

position:8142269:1
position: 8142269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8140983-8141401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8141854-8142269:1:exon

GSX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GSX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GS homeobox 1 isoform X1
translation: MPRSFLVDSLVLREAGEKKAPEGSPPPLFPYAVPPPHALHGLSPGACHARKAGLLCVCPLCVTASQLHGPPGPPALPLLKASFPPFGSQYCHAPLGRQHSAVSPGVAHGPAAAAAAAALYQTSYPLPDPRQFHCISVDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGSSHRGGGSGGSGSGGGSAGAGAGGGSGAPPGCKCASLSSAKCSEDDDELPMSPSSSGKDDRDLSVTP
SIO_010081: GSX1
subclass of: SO_0000673
so part of: GSX1
location: join(8140990..8141401,8141854..8142269)
location: region:8140990-8142269:1
so has part: feature:8140990-8141401:1:exon
so has part: feature:8141854-8142269:1:exon

XP_004577622.1
type: Protein
SIO_000068: ncbiprotein

position:8140990:1
position: 8140990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8140990-8141401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8141854-8142269:1:exon

GSX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: GSX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GS homeobox 1 isoform X2
translation: MPRSFLVDSLVLREAGEKKAPEGSPPPLFPYAVPPPHALHGLSPGACHARKAGLLCVCPLCVTASQLHGPPGPPALPLLKASFPPFGSQYCHAPLGRQHSAVSPGVAHGPAAAAAAAALYQTSYPLPDPRQFHCISVDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGSSHRGGGSGGAGGGSGAPPGCKCASLSSAKCSEDDDELPMSPSSSGKDDRDLSVTP
SIO_010081: GSX1
subclass of: SO_0000673
so part of: GSX1
location: join(8140990..8141401,8141854..8142093,8142127..8142269)
location: region:8140990-8142269:1
so has part: feature:8140990-8141401:1:exon
so has part: feature:8141854-8142093:1:exon
so has part: feature:8142127-8142269:1:exon

XP_004577623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8140990-8141401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8141854-8142093:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8142127-8142269:1:exon

LOC118758045
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: LOC118758045
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8164414..8164520)
location: region:8164414-8164520:-1
so has part: feature:8164414-8164520:-1:exon
subclass of: SO_0000623

118758045
type: Gene
SIO_000068: ncbigene

position:8164414:-1
position: 8164414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8164520:-1
position: 8164520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8164414-8164520:-1:exon

LOC118758045
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9978
nc RNA class: snRNA
gene: LOC118758045
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004995501.1
SIO_010081: LOC118758045
subclass of: SO_0000673
so part of: LOC118758045
location: complement(8164414..8164520)
location: region:8164414-8164520:-1
so has part: feature:8164414-8164520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8164414-8164520:-1:exon

PDX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PDX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8250990..8255300
location: region:8250990-8255300:1
so has part: feature:8250990-8255300:1:exon
subclass of: SO_0000010

101535161
type: Gene
SIO_000068: ncbigene

position:8250990:1
position: 8250990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8255300:1
position: 8255300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8250990-8255300:1:exon

PDX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PDX1
product: pancreatic and duodenal homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins
transcript id: XM_004577564.1
SIO_010081: PDX1
subclass of: SO_0000673
so part of: PDX1
location: join(8250990..8251409,8254871..8255300)
location: region:8250990-8255300:1
so has part: feature:8250990-8251409:1:exon
so has part: feature:8254871-8255300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8250990-8251409:1:exon

position:8251409:1
position: 8251409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8254871-8255300:1:exon

position:8254871:1
position: 8254871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: PDX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pancreas/duodenum homeobox protein 1
translation: MNGEEQYYAATQLYKDPCAFQRGPAPPEFGASPPACLYLGRQPPPPPPPPFPGALGALEQGSPPDISPYEVPALADDPAAVAHLHHHLPAQLALPHPPAGPFPDGAEPSTLEEACRVQLPYPWMKSTKAHAWKGQWAGGAYMAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEEDKKRGVGGTAAGGGGVAEPEQDCAVTSGEELLALPPPGGAVPPAAPAAAREGRLPPGLSTSPQPRRPQEPR
SIO_010081: PDX1
subclass of: SO_0000673
so part of: PDX1
location: join(8250998..8251409,8254871..8255295)
location: region:8250998-8255295:1
so has part: feature:8250998-8251409:1:exon
so has part: feature:8254871-8255295:1:exon

XP_004577621.1
type: Protein
SIO_000068: ncbiprotein

position:8250998:1
position: 8250998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8255295:1
position: 8255295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8250998-8251409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8254871-8255295:1:exon

CDX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: CDX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8296932..8302471)
location: region:8296932-8302471:-1
so has part: feature:8296932-8302471:-1:exon
subclass of: SO_0000010

101534916
type: Gene
SIO_000068: ncbigene

position:8296932:-1
position: 8296932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8302471:-1
position: 8302471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8296932-8302471:-1:exon

CDX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: CDX2
product: caudal type homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 Proteins
transcript id: XM_004577563.1
SIO_010081: CDX2
subclass of: SO_0000673
so part of: CDX2
location: complement(join(8296932..8297192,8297984..8298129,8301559..8302471))
location: region:8296932-8302471:-1
so has part: feature:8301559-8302471:-1:exon
so has part: feature:8297984-8298129:-1:exon
so has part: feature:8296932-8297192:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8301559-8302471:-1:exon

position:8301559:-1
position: 8301559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8297984-8298129:-1:exon

position:8297984:-1
position: 8297984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8298129:-1
position: 8298129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8296932-8297192:-1:exon

position:8297192:-1
position: 8297192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: CDX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein CDX-2
translation: MYVSYLLDKDVSMYPSSVRHSGSLNLAPQNFVSPPQYPDYGGYHVAAAAAAAANLDSAQSPGPSWPAAYGAPLREDWNGYAPGGAAAAANAVAHGLNGGSPAAAMGYSSPADYHPHHHPHHHPHHPAAAPSCASGLLQTLNPGPPGPPATAAAEQLSPGGQRRNLCEWMRKPAQPSLGSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKMQQQQQQPPPQPPPPPQQAPQPQPGPLRSVPEPLSPVPSLQGSVPGSVPGVLGPAAGVLNPTVTQ
SIO_010081: CDX2
subclass of: SO_0000673
so part of: CDX2
location: complement(join(8296938..8297192,8297984..8298129,8301559..8302099))
location: region:8296938-8302099:-1
so has part: feature:8301559-8302099:-1:exon
so has part: feature:8297984-8298129:-1:exon
so has part: feature:8296938-8297192:-1:exon

XP_004577620.1
type: Protein
SIO_000068: ncbiprotein

position:8296938:-1
position: 8296938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8302099:-1
position: 8302099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8301559-8302099:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8297984-8298129:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8296938-8297192:-1:exon

URAD
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: URAD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8309909..8323723)
location: region:8309909-8323723:-1
so has part: feature:8309909-8323723:-1:exon
subclass of: SO_0000010

101534675
type: Gene
SIO_000068: ncbigene

position:8309909:-1
position: 8309909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8323723:-1
position: 8323723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8309909-8323723:-1:exon

URAD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: URAD
product: ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_004577562.1
SIO_010081: URAD
subclass of: SO_0000673
so part of: URAD
location: complement(join(8309909..8310255,8323549..8323723))
location: region:8309909-8323723:-1
so has part: feature:8323549-8323723:-1:exon
so has part: feature:8309909-8310255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8323549-8323723:-1:exon

position:8323549:-1
position: 8323549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8309909-8310255:-1:exon

position:8310255:-1
position: 8310255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

URAD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: URAD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
translation: MDMETVNSMDFGEFVEVFGNVIERCPLVAAAVWSQRPFSDPADLERHFFSFIDTLPQSGQEGVLRCHPDLAGRELQRGTLTAESQREQSGAGLTSLGAAERLRLTELNAQYRARFGFPFVLAARLSDRAAVPRELARRLLCPPELELRTALEEVKKIGHLRLADLLGADPAKL
SIO_010081: URAD
subclass of: SO_0000673
so part of: URAD
location: complement(join(8309909..8310255,8323549..8323723))
location: region:8309909-8323723:-1
so has part: feature:8323549-8323723:-1:exon
so has part: feature:8309909-8310255:-1:exon

XP_004577619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8323549-8323723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8309909-8310255:-1:exon

FLT3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: FLT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8330536..8458724)
location: region:8330536-8458724:-1
so has part: feature:8330536-8458724:-1:exon
subclass of: SO_0000010

101534350
type: Gene
SIO_000068: ncbigene

position:8330536:-1
position: 8330536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8458724:-1
position: 8458724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8330536-8458724:-1:exon

FLT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: FLT3
product: fms related receptor tyrosine kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036493496.1
SIO_010081: FLT3
subclass of: SO_0000673
so part of: FLT3
location: complement(join(8330536..8331098,8335103..8335208,8335725..8335824,8336228..8336339,8339106..8339228,8342530..8342657,8345342..8345424,8348943..8349096,8350534..8350644,8357464..8357627,8357890..8357998,8376105..8376258,8376355..8376494,8386118..8386245,8391351..8391480,8396418..8396533,8399935..8400137,8420591..8420712,8458321..8458440,8458682..8458724))
location: region:8330536-8458724:-1
so has part: feature:8458682-8458724:-1:exon
so has part: feature:8458321-8458440:-1:exon
so has part: feature:8420591-8420712:-1:exon
so has part: feature:8399935-8400137:-1:exon
so has part: feature:8396418-8396533:-1:exon
so has part: feature:8391351-8391480:-1:exon
so has part: feature:8386118-8386245:-1:exon
so has part: feature:8376355-8376494:-1:exon
so has part: feature:8376105-8376258:-1:exon
so has part: feature:8357890-8357998:-1:exon
so has part: feature:8357464-8357627:-1:exon
so has part: feature:8350534-8350644:-1:exon
so has part: feature:8348943-8349096:-1:exon
so has part: feature:8345342-8345424:-1:exon
so has part: feature:8342530-8342657:-1:exon
so has part: feature:8339106-8339228:-1:exon
so has part: feature:8336228-8336339:-1:exon
so has part: feature:8335725-8335824:-1:exon
so has part: feature:8335103-8335208:-1:exon
so has part: feature:8330536-8331098:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8458682-8458724:-1:exon

position:8458682:-1
position: 8458682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8458321-8458440:-1:exon

position:8458321:-1
position: 8458321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8458440:-1
position: 8458440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8420591-8420712:-1:exon

position:8420591:-1
position: 8420591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8420712:-1
position: 8420712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8399935-8400137:-1:exon

position:8399935:-1
position: 8399935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8400137:-1
position: 8400137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8396418-8396533:-1:exon

position:8396418:-1
position: 8396418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8396533:-1
position: 8396533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8391351-8391480:-1:exon

position:8391351:-1
position: 8391351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8391480:-1
position: 8391480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8386118-8386245:-1:exon

position:8386118:-1
position: 8386118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8386245:-1
position: 8386245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8376355-8376494:-1:exon

position:8376355:-1
position: 8376355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8376494:-1
position: 8376494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8376105-8376258:-1:exon

position:8376105:-1
position: 8376105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8376258:-1
position: 8376258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8357890-8357998:-1:exon

position:8357890:-1
position: 8357890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8357998:-1
position: 8357998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8357464-8357627:-1:exon

position:8357464:-1
position: 8357464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8357627:-1
position: 8357627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8350534-8350644:-1:exon

position:8350534:-1
position: 8350534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8350644:-1
position: 8350644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8348943-8349096:-1:exon

position:8348943:-1
position: 8348943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8349096:-1
position: 8349096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8345342-8345424:-1:exon

position:8345342:-1
position: 8345342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8345424:-1
position: 8345424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8342530-8342657:-1:exon

position:8342530:-1
position: 8342530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8342657:-1
position: 8342657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8339106-8339228:-1:exon

position:8339106:-1
position: 8339106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8339228:-1
position: 8339228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8336228-8336339:-1:exon

position:8336228:-1
position: 8336228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8336339:-1
position: 8336339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8335725-8335824:-1:exon

position:8335725:-1
position: 8335725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8335824:-1
position: 8335824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8335103-8335208:-1:exon

position:8335103:-1
position: 8335103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8335208:-1
position: 8335208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8330536-8331098:-1:exon

position:8331098:-1
position: 8331098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FLT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9978
gene: FLT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein kinase FLT3
translation: MPALARRGGRLPLLGPGRRPPAVPGIPLPASPRRCAGIGLEGRVARGLAGRFGPAVFLAVIFGTITNQDLPVIKCMLINHKSNDSSVGKSTPYPTVSESPEDLGCVLRPESAGTVYRAATVEVDVSASITLRVLISSPGNISCQWIFKDSMLSCQPHFDLHNRGVVSMVILKMTETQAGEYLLLIQSEATNYTILFTVSIRNTLLYTLRRPYFRRLGNQDALVCISESVPEPVVEWVLCDSQGESCKEESPTVVKKEEKVLRELFGPDIRCCARNELGRECTKLFTIDLNKTPQATLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELEHKALEEGRYFEMSSYSTNRTMIRIVLAFVSSVGRNDAGYYTCSSSKHRSQSALVTILGGPHVETEMSASQASCSSDGYPLPSWTWKKCSDGSANCTEEITEGVWNKKAGQWRSSSTLNMSEAVKGFSVKCCAYNSVGTSCKTIQLKSTEKADNSEKEALMSELKMMTHLGSHENIVNLLGACTLSGPVYLIFEYCCYGDLLNYLRSKREKFHRTWTEIFKEHNFSFYPTFQSHPNSSMPGSRDVQLHQELDQGSALNGSSFQSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVIRGNARLPIKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQSGFKMDQPFYATEEIYFIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAMYQNVDGHAPECSSVYQNRRSFGREMDPELPSPQAPVEES
SIO_010081: FLT3
subclass of: SO_0000673
so part of: FLT3
location: complement(join(8330976..8331098,8335103..8335208,8335725..8335824,8336228..8336339,8339106..8339228,8342530..8342657,8345342..8345424,8348943..8349096,8350534..8350644,8357464..8357627,8357890..8357998,8376105..8376258,8376355..8376494,8386118..8386245,8391351..8391480,8396418..8396533,8399935..8400137,8420591..8420712,8458321..8458440,8458682..8458724))
location: region:8330976-8458724:-1
so has part: feature:8458682-8458724:-1:exon
so has part: feature:8458321-8458440:-1:exon
so has part: feature:8420591-8420712:-1:exon
so has part: feature:8399935-8400137:-1:exon
so has part: feature:8396418-8396533:-1:exon
so has part: feature:8391351-8391480:-1:exon
so has part: feature:8386118-8386245:-1:exon
so has part: feature:8376355-8376494:-1:exon
so has part: feature:8376105-8376258:-1:exon
so has part: feature:8357890-8357998:-1:exon
so has part: feature:8357464-8357627:-1:exon
so has part: feature:8350534-8350644:-1:exon
so has part: feature:8348943-8349096:-1:exon
so has part: feature:8345342-8345424:-1:exon
so has part: feature:8342530-8342657:-1:exon
so has part: feature:8339106-8339228:-1:exon
so has part: feature:8336228-8336339:-1:exon
so has part: feature:8335725-8335824:-1:exon
so has part: feature:8335103-8335208:-1:exon
so has part: feature:8330976-8331098:-1:exon

XP_036349389.1
type: Protein
SIO_000068: ncbiprotein

position:8330976:-1
position: 8330976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8458682-8458724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8458321-8458440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8420591-8420712:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8399935-8400137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8396418-8396533:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8391351-8391480:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8386118-8386245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8376355-8376494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8376105-8376258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8357890-8357998:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8357464-8357627:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8350534-8350644:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8348943-8349096:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8345342-8345424:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8342530-8342657:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8339106-8339228:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8336228-8336339:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8335725-8335824:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8335103-8335208:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8330976-8331098:-1:exon

PAN3
type: Gene
subclass of: SO_0000704
RO_0002162: 9978
gene: PAN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8507464..8642313
location: region:8507464-8642313:1
so has part: feature:8507464-8642313:1:exon
subclass of: SO_0000010

101534101
type: Gene
SIO_000068: ncbigene

position:8507464:1
position: 8507464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8642313:1
position: 8642313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8507464-8642313:1:exon

PAN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9978
gene: PAN3
product: poly(A) specific ribonuclease subunit PAN3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins
transcript id: XM_004577698.1
SIO_010081: PAN3
subclass of: SO_0000673
so part of: PAN3
location: join(8507464..8507950,8531608..8531729,8533608..8533674,8535582..8535652,8550053..8550214,8571599..8571745,8610416..8610549,8612736..8612822,8613878..8613935,8621315..8621476,8621689..8621805,8621896..8621997,8623340..8623505,8624594..8624684,8629643..8629782,8632169..8632298,8632725..8632789,8636644..8636782,8641498..8642313)
location: region:8507464-8642313:1
so has part: feature:8507464-8507950:1:exon
so has part: feature:8531608-8531729:1:exon
so has part: feature:8533608-8533674:1:exon
so has part: feature:8535582-8535652:1:exon
so has part: feature:8550053-8550214:1:exon
so has part: feature:8571599-8571745:1:exon
so has part: feature:8610416-8610549:1:exon
so has part: feature:8612736-8612822:1:exon
so has part: feature:8613878-8613935:1:exon
so has part: feature:8621315-8621476:1:exon
so has part: feature:8621689-8621805:1:exon
so has part: feature:8621896-8621997:1:exon
so has part: feature:8623340-8623505:1:exon
so has part: feature:8624594-8624684:1:exon
so has part: feature:8629643-8629782:1:exon
so has part: feature:8632169-8632298:1:exon
so has part: feature:8632725-8632789:1:exon
so has part: feature:8636644-8636782:1:exon
so has part: feature:8641498-8642313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8507464-8507950:1:exon