Capra hircus breed San Clemente chromosome 27, ASM170441v1, whole genome shotgun sequence.
type: Entry
definition: Capra hircus breed San Clemente chromosome 27, ASM170441v1, whole genome shotgun sequence.
sequence version: NC_030834.1
sequence date: 2016-09-08
sequence: sequence
division: CON
label: NC_030834.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA340281
dblink: SAMN03863711
keyword: WGS
keyword: RefSeq
source: Capra hircus (goat)
organism: Capra hircus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra.
reference: 1
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM004588.1.\nAssembly name: ASM170441v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the USDA ARS on 2016/08/24. The\noriginal whole-genome shotgun project has the accession\nLWLT00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: USDA ARS\nAssembly Date :: MAR-2016\nAssembly Method :: Celera Assembler v. 8.2; BioNano Genomics\n Irys v. APRIL-2015; Lachesis Hi-C v.\n JUNE-2015\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Capra hircus Annotation Release 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 44709034
topology: linear
so has quality: SO_0000987
location: 1..44709034
location: region:1-44709034:1
RO_0002162: 9925

NC_030834
type: RefSeq
SIO_000068: refseq

PRJNA340281
type: BioProject
SIO_000068: bioproject

SAMN03863711
type: BioSample
SIO_000068: biosample

1
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44709034:1
position: 44709034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-44709034:1:source
so part of: sequence
organism: Capra hircus
mol type: genomic DNA
chromosome: 27
sex: male
tissue type: blood
dev stage: adult
breed: San Clemente

9925
type: Taxonomy
SIO_000068: taxonomy

ZNF385D
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ZNF385D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1190332..1572356)
location: region:1190332-1572356:-1
so has part: feature:1190332-1572356:-1:exon
subclass of: SO_0000010

102180997
type: Gene
SIO_000068: ncbigene

position:1190332:-1
position: 1190332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572356:-1
position: 1572356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190332-1572356:-1:exon

ZNF385D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZNF385D
product: zinc finger protein 385D, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018042038.1
SIO_010081: ZNF385D
subclass of: SO_0000673
so part of: ZNF385D
location: complement(join(1190332..1193300,1196519..1196620,1197590..1197768,1214381..1214614,1298033..1298195,1343961..1344071,1481277..1481419,1572157..1572356))
location: region:1190332-1572356:-1
so has part: feature:1572157-1572356:-1:exon
so has part: feature:1481277-1481419:-1:exon
so has part: feature:1343961-1344071:-1:exon
so has part: feature:1298033-1298195:-1:exon
so has part: feature:1214381-1214614:-1:exon
so has part: feature:1197590-1197768:-1:exon
so has part: feature:1196519-1196620:-1:exon
so has part: feature:1190332-1193300:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1572157-1572356:-1:exon

position:1572157:-1
position: 1572157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1481277-1481419:-1:exon

position:1481277:-1
position: 1481277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1481419:-1
position: 1481419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1343961-1344071:-1:exon

position:1343961:-1
position: 1343961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344071:-1
position: 1344071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1298033-1298195:-1:exon

position:1298033:-1
position: 1298033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298195:-1
position: 1298195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1214381-1214614:-1:exon

position:1214381:-1
position: 1214381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214614:-1
position: 1214614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1197590-1197768:-1:exon

position:1197590:-1
position: 1197590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197768:-1
position: 1197768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1196519-1196620:-1:exon

position:1196519:-1
position: 1196519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196620:-1
position: 1196620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1190332-1193300:-1:exon

position:1193300:-1
position: 1193300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF385D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZNF385D
product: zinc finger protein 385D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018042037.1
SIO_010081: ZNF385D
subclass of: SO_0000673
so part of: ZNF385D
location: complement(join(1190332..1193300,1196519..1196620,1197590..1197768,1214381..1214614,1298033..1298195,1343961..1344071,1481277..1481419,1571533..1571625))
location: region:1190332-1571625:-1
so has part: feature:1571533-1571625:-1:exon
so has part: feature:1481277-1481419:-1:exon
so has part: feature:1343961-1344071:-1:exon
so has part: feature:1298033-1298195:-1:exon
so has part: feature:1214381-1214614:-1:exon
so has part: feature:1197590-1197768:-1:exon
so has part: feature:1196519-1196620:-1:exon
so has part: feature:1190332-1193300:-1:exon

position:1571625:-1
position: 1571625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1571533-1571625:-1:exon

position:1571533:-1
position: 1571533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1481277-1481419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1343961-1344071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1298033-1298195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1214381-1214614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1197590-1197768:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1196519-1196620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190332-1193300:-1:exon

ZNF385D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZNF385D
product: zinc finger protein 385D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018042036.1
SIO_010081: ZNF385D
subclass of: SO_0000673
so part of: ZNF385D
location: complement(join(1190332..1193300,1196519..1196620,1197590..1197768,1214381..1214614,1298033..1298195,1343961..1344071,1481277..1481419,1570769..1571325))
location: region:1190332-1571325:-1
so has part: feature:1570769-1571325:-1:exon
so has part: feature:1481277-1481419:-1:exon
so has part: feature:1343961-1344071:-1:exon
so has part: feature:1298033-1298195:-1:exon
so has part: feature:1214381-1214614:-1:exon
so has part: feature:1197590-1197768:-1:exon
so has part: feature:1196519-1196620:-1:exon
so has part: feature:1190332-1193300:-1:exon

position:1571325:-1
position: 1571325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1570769-1571325:-1:exon

position:1570769:-1
position: 1570769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1481277-1481419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1343961-1344071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1298033-1298195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1214381-1214614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1197590-1197768:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1196519-1196620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190332-1193300:-1:exon

ZNF385D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZNF385D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 385D isoform X2
translation: MYLGGTCQSPALPALVRPPAPPLQPSLDIKPFLPFPLDTAAAVNLFPNFNAMDPIQKAVINHTFGVPLPHRRKQIISCTICQLRFNSDSQAAAHYKGTKHAKKLKALETMKAKQKSVAAKDSAKTASTCTTTHAISSSSDETDSTTGTPAISTTTTVEIRKSSVMTTEITSKVEKSPTTASGNSSCPSTETEEEKAKRLLYCSLCKVAVNSASQLEAHNSGTKHKTMLEARNGSGAIKAFPRAGVKGKGPVNKGNTGLQNKTFHCEICDVHVNSETQLKQHISSRRHKDRAAGKPPKPKYSPYNKLQKAAHPLGVKLVFSKEPSKPLAPRLLPGPLAAAAAAVAVGSPFGLRAAPPALLPALPPALLRPAPGPMRSAHAPVLFAPY
SIO_010081: ZNF385D
subclass of: SO_0000673
so part of: ZNF385D
location: complement(join(1193082..1193300,1196519..1196620,1197590..1197768,1214381..1214614,1298033..1298195,1343961..1344071,1481277..1481419,1571533..1571542))
location: region:1193082-1571542:-1
so has part: feature:1571533-1571542:-1:exon
so has part: feature:1481277-1481419:-1:exon
so has part: feature:1343961-1344071:-1:exon
so has part: feature:1298033-1298195:-1:exon
so has part: feature:1214381-1214614:-1:exon
so has part: feature:1197590-1197768:-1:exon
so has part: feature:1196519-1196620:-1:exon
so has part: feature:1193082-1193300:-1:exon

XP_017897526.1
type: Protein
SIO_000068: ncbiprotein

position:1193082:-1
position: 1193082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571542:-1
position: 1571542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1571533-1571542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481277-1481419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1343961-1344071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1298033-1298195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1214381-1214614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1197590-1197768:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1196519-1196620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1193082-1193300:-1:exon

ZNF385D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZNF385D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 385D isoform X1
translation: MLSFCGTCQSPALPALVRPPAPPLQPSLDIKPFLPFPLDTAAAVNLFPNFNAMDPIQKAVINHTFGVPLPHRRKQIISCTICQLRFNSDSQAAAHYKGTKHAKKLKALETMKAKQKSVAAKDSAKTASTCTTTHAISSSSDETDSTTGTPAISTTTTVEIRKSSVMTTEITSKVEKSPTTASGNSSCPSTETEEEKAKRLLYCSLCKVAVNSASQLEAHNSGTKHKTMLEARNGSGAIKAFPRAGVKGKGPVNKGNTGLQNKTFHCEICDVHVNSETQLKQHISSRRHKDRAAGKPPKPKYSPYNKLQKAAHPLGVKLVFSKEPSKPLAPRLLPGPLAAAAAAVAVGSPFGLRAAPPALLPALPPALLRPAPGPMRSAHAPVLFAPY
SIO_010081: ZNF385D
subclass of: SO_0000673
so part of: ZNF385D
location: complement(join(1193082..1193300,1196519..1196620,1197590..1197768,1214381..1214614,1298033..1298195,1343961..1344071,1481277..1481419,1570769..1570781))
location: region:1193082-1570781:-1
so has part: feature:1570769-1570781:-1:exon
so has part: feature:1481277-1481419:-1:exon
so has part: feature:1343961-1344071:-1:exon
so has part: feature:1298033-1298195:-1:exon
so has part: feature:1214381-1214614:-1:exon
so has part: feature:1197590-1197768:-1:exon
so has part: feature:1196519-1196620:-1:exon
so has part: feature:1193082-1193300:-1:exon

XP_017897525.1
type: Protein
SIO_000068: ncbiprotein

position:1570781:-1
position: 1570781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1570769-1570781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481277-1481419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1343961-1344071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1298033-1298195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1214381-1214614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1197590-1197768:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1196519-1196620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1193082-1193300:-1:exon

ZNF385D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZNF385D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 385D isoform X3
translation: MDPIQKAVINHTFGVPLPHRRKQIISCTICQLRFNSDSQAAAHYKGTKHAKKLKALETMKAKQKSVAAKDSAKTASTCTTTHAISSSSDETDSTTGTPAISTTTTVEIRKSSVMTTEITSKVEKSPTTASGNSSCPSTETEEEKAKRLLYCSLCKVAVNSASQLEAHNSGTKHKTMLEARNGSGAIKAFPRAGVKGKGPVNKGNTGLQNKTFHCEICDVHVNSETQLKQHISSRRHKDRAAGKPPKPKYSPYNKLQKAAHPLGVKLVFSKEPSKPLAPRLLPGPLAAAAAAVAVGSPFGLRAAPPALLPALPPALLRPAPGPMRSAHAPVLFAPY
SIO_010081: ZNF385D
subclass of: SO_0000673
so part of: ZNF385D
location: complement(join(1193082..1193300,1196519..1196620,1197590..1197768,1214381..1214614,1298033..1298195,1343961..1344071))
location: region:1193082-1344071:-1
so has part: feature:1343961-1344071:-1:exon
so has part: feature:1298033-1298195:-1:exon
so has part: feature:1214381-1214614:-1:exon
so has part: feature:1197590-1197768:-1:exon
so has part: feature:1196519-1196620:-1:exon
so has part: feature:1193082-1193300:-1:exon

XP_017897527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1343961-1344071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1298033-1298195:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1214381-1214614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1197590-1197768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1196519-1196620:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1193082-1193300:-1:exon

TRNAG-UCC
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAG-UCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1963898..1963970)
location: region:1963898-1963970:-1
so has part: feature:1963898-1963970:-1:exon
subclass of: SO_0000663

108634110
type: Gene
SIO_000068: ncbigene

position:1963898:-1
position: 1963898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1963970:-1
position: 1963970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1963898-1963970:-1:exon

TRNAG-UCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAG-UCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon UCC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1963935..1963937),aa:Gly, seq:tcc)
SIO_010081: TRNAG-UCC
subclass of: SO_0000673
so part of: TRNAG-UCC
location: complement(1963898..1963970)
location: region:1963898-1963970:-1
so has part: feature:1963898-1963970:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1963898-1963970:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2476533..2476605
location: region:2476533-2476605:1
so has part: feature:2476533-2476605:1:exon
subclass of: SO_0000663

108634101
type: Gene
SIO_000068: ncbigene

position:2476533:1
position: 2476533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2476605:1
position: 2476605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2476533-2476605:1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2476566..2476568,aa:Gly,seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: 2476533..2476605
location: region:2476533-2476605:1
so has part: feature:2476533-2476605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2476533-2476605:1:exon

LOC108634078
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2824282..2842733)
location: region:2824282-2842733:-1
so has part: feature:2824282-2842733:-1:exon
subclass of: SO_0000011

108634078
type: Gene
SIO_000068: ncbigene

position:2824282:-1
position: 2824282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2842733:-1
position: 2842733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2824282-2842733:-1:exon

LOC108634078
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108634078
product: uncharacterized LOC108634078
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001917355.1
SIO_010081: LOC108634078
subclass of: SO_0000673
so part of: LOC108634078
location: complement(join(2824282..2824868,2842549..2842733))
location: region:2824282-2842733:-1
so has part: feature:2842549-2842733:-1:exon
so has part: feature:2824282-2824868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2842549-2842733:-1:exon

position:2842549:-1
position: 2842549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2824282-2824868:-1:exon

position:2824868:-1
position: 2824868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102174361
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102174361
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2975131..3332615
location: region:2975131-3332615:1
so has part: feature:2975131-3332615:1:exon
subclass of: SO_0000010

102174361
type: Gene
SIO_000068: ncbigene

position:2975131:1
position: 2975131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3332615:1
position: 3332615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2975131-3332615:1:exon

LOC102174361
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102174361
product: ubiquitin-conjugating enzyme E2 E2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_018041985.1
SIO_010081: LOC102174361
subclass of: SO_0000673
so part of: LOC102174361
location: join(2975131..2975279,2980651..2980834,2990777..2990827,3255323..3255455,3282900..3283047,3331847..3332615)
location: region:2975131-3332615:1
so has part: feature:2975131-2975279:1:exon
so has part: feature:2980651-2980834:1:exon
so has part: feature:2990777-2990827:1:exon
so has part: feature:3255323-3255455:1:exon
so has part: feature:3282900-3283047:1:exon
so has part: feature:3331847-3332615:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2975131-2975279:1:exon

position:2975279:1
position: 2975279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2980651-2980834:1:exon

position:2980651:1
position: 2980651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2980834:1
position: 2980834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2990777-2990827:1:exon

position:2990777:1
position: 2990777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2990827:1
position: 2990827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3255323-3255455:1:exon

position:3255323:1
position: 3255323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3255455:1
position: 3255455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3282900-3283047:1:exon

position:3282900:1
position: 3282900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3283047:1
position: 3283047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3331847-3332615:1:exon

position:3331847:1
position: 3331847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102174361
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102174361
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 E2
translation: MSTEAQRVDDSPGTSGGSSDGDQRESVQQEPEREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT
SIO_010081: LOC102174361
subclass of: SO_0000673
so part of: LOC102174361
location: join(2980659..2980834,2990777..2990827,3255323..3255455,3282900..3283047,3331847..3331944)
location: region:2980659-3331944:1
so has part: feature:2980659-2980834:1:exon
so has part: feature:2990777-2990827:1:exon
so has part: feature:3255323-3255455:1:exon
so has part: feature:3282900-3283047:1:exon
so has part: feature:3331847-3331944:1:exon

XP_017897474.1
type: Protein
SIO_000068: ncbiprotein

position:2980659:1
position: 2980659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3331944:1
position: 3331944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2980659-2980834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2990777-2990827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3255323-3255455:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3282900-3283047:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3331847-3331944:1:exon

LOC102173916
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102173916
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3512385..3580515
location: region:3512385-3580515:1
so has part: feature:3512385-3580515:1:exon
subclass of: SO_0000010

102173916
type: Gene
SIO_000068: ncbigene

position:3512385:1
position: 3512385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3580515:1
position: 3580515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3512385-3580515:1:exon

LOC102173916
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102173916
product: ubiquitin-conjugating enzyme E2 E1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 57 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_018041840.1
SIO_010081: LOC102173916
subclass of: SO_0000673
so part of: LOC102173916
location: join(3512385..3512545,3513433..3513617,3517119..3517169,3576743..3576875,3578643..3578790,3579723..3580515)
location: region:3512385-3580515:1
so has part: feature:3512385-3512545:1:exon
so has part: feature:3513433-3513617:1:exon
so has part: feature:3517119-3517169:1:exon
so has part: feature:3576743-3576875:1:exon
so has part: feature:3578643-3578790:1:exon
so has part: feature:3579723-3580515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3512385-3512545:1:exon

position:3512545:1
position: 3512545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3513433-3513617:1:exon

position:3513433:1
position: 3513433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3513617:1
position: 3513617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3517119-3517169:1:exon

position:3517119:1
position: 3517119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3517169:1
position: 3517169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3576743-3576875:1:exon

position:3576743:1
position: 3576743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3576875:1
position: 3576875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3578643-3578790:1:exon

position:3578643:1
position: 3578643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3578790:1
position: 3578790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3579723-3580515:1:exon

position:3579723:1
position: 3579723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102173916
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102173916
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 E1
translation: MSDDDSRASTSSSSSSSSNQQTEKEANTPKKKESKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT
SIO_010081: LOC102173916
subclass of: SO_0000673
so part of: LOC102173916
location: join(3513466..3513617,3517119..3517169,3576743..3576875,3578643..3578790,3579723..3579820)
location: region:3513466-3579820:1
so has part: feature:3513466-3513617:1:exon
so has part: feature:3517119-3517169:1:exon
so has part: feature:3576743-3576875:1:exon
so has part: feature:3578643-3578790:1:exon
so has part: feature:3579723-3579820:1:exon

XP_017897329.1
type: Protein
SIO_000068: ncbiprotein

position:3513466:1
position: 3513466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3579820:1
position: 3579820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3513466-3513617:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3517119-3517169:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3576743-3576875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3578643-3578790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3579723-3579820:1:exon

NKIRAS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: NKIRAS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3585192..3606091)
location: region:3585192-3606091:-1
so has part: feature:3585192-3606091:-1:exon
subclass of: SO_0000010

100861360
type: Gene
SIO_000068: ncbigene

position:3585192:-1
position: 3585192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3606091:-1
position: 3606091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3585192-3606091:-1:exon

NKIRAS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NKIRAS1
product: NFKB inhibitor interacting Ras like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_018041841.1
SIO_010081: NKIRAS1
subclass of: SO_0000673
so part of: NKIRAS1
location: complement(join(3585192..3585701,3590686..3590927,3597473..3597583,3605989..3606091))
location: region:3585192-3606091:-1
so has part: feature:3605989-3606091:-1:exon
so has part: feature:3597473-3597583:-1:exon
so has part: feature:3590686-3590927:-1:exon
so has part: feature:3585192-3585701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3605989-3606091:-1:exon

position:3605989:-1
position: 3605989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3597473-3597583:-1:exon

position:3597473:-1
position: 3597473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3597583:-1
position: 3597583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3590686-3590927:-1:exon

position:3590686:-1
position: 3590686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3590927:-1
position: 3590927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3585192-3585701:-1:exon

position:3585701:-1
position: 3585701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NKIRAS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NKIRAS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NF-kappa-B inhibitor-interacting Ras-like protein 1
translation: MGKGCKVVVCGLLSVGKTAILEQLLYGNHTIGLGDCETLEDVYMASVETDRGVKEQLHLYDTRGLQEGVELPKHYFSFADGFVLVYSVNNLESFQRVELLKKEIDKFKDKKEVAIVVLGNKIDLSEQRQVDAEVAQQWARSEKVRLWEVTVTDRKTLIEPFTLLASKLSQPQSKSSFPLPGRKNKGNSSSEN
SIO_010081: NKIRAS1
subclass of: SO_0000673
so part of: NKIRAS1
location: complement(join(3585459..3585701,3590686..3590927,3597473..3597566))
location: region:3585459-3597566:-1
so has part: feature:3597473-3597566:-1:exon
so has part: feature:3590686-3590927:-1:exon
so has part: feature:3585459-3585701:-1:exon

XP_017897330.1
type: Protein
SIO_000068: ncbiprotein

position:3585459:-1
position: 3585459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3597566:-1
position: 3597566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3597473-3597566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3590686-3590927:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3585459-3585701:-1:exon

LOC102173161
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102173161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3595845..3596781
location: region:3595845-3596781:1
so has part: feature:3595845-3596781:1:exon

102173161
type: Gene
SIO_000068: ncbigene

position:3595845:1
position: 3595845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3596781:1
position: 3596781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3595845-3596781:1:exon

LOC102173161
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9925
gene: LOC102173161
product: 60S ribosomal protein L6 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 1975 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_311166.3
SIO_010081: LOC102173161
so part of: LOC102173161
location: 3595845..3596781
location: region:3595845-3596781:1
so has part: feature:3595845-3596781:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3595845-3596781:1:exon

RPL15
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: RPL15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3606165..3610144
location: region:3606165-3610144:1
so has part: feature:3606165-3610144:1:exon
subclass of: SO_0000010

102180725
type: Gene
SIO_000068: ncbigene

position:3606165:1
position: 3606165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3610144:1
position: 3610144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3606165-3610144:1:exon

RPL15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RPL15
product: ribosomal protein L15, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 1272 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_018041842.1
SIO_010081: RPL15
subclass of: SO_0000673
so part of: RPL15
location: join(3606165..3606269,3606681..3606863,3606965..3607101,3608291..3609885)
location: region:3606165-3609885:1
so has part: feature:3606165-3606269:1:exon
so has part: feature:3606681-3606863:1:exon
so has part: feature:3606965-3607101:1:exon
so has part: feature:3608291-3609885:1:exon

position:3609885:1
position: 3609885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3606165-3606269:1:exon

position:3606269:1
position: 3606269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3606681-3606863:1:exon

position:3606681:1
position: 3606681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3606863:1
position: 3606863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3606965-3607101:1:exon

position:3606965:1
position: 3606965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3607101:1
position: 3607101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3608291-3609885:1:exon

position:3608291:1
position: 3608291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RPL15
product: ribosomal protein L15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 677 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_018041843.1
SIO_010081: RPL15
subclass of: SO_0000673
so part of: RPL15
location: join(3606281..3606385,3606681..3606863,3606965..3607101,3608291..3610144)
location: region:3606281-3610144:1
so has part: feature:3606281-3606385:1:exon
so has part: feature:3606681-3606863:1:exon
so has part: feature:3606965-3607101:1:exon
so has part: feature:3608291-3610144:1:exon

position:3606281:1
position: 3606281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3606281-3606385:1:exon

position:3606385:1
position: 3606385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3606681-3606863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3606965-3607101:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3608291-3610144:1:exon

RPL15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RPL15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L15
translation: MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITRPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR
SIO_010081: RPL15
subclass of: SO_0000673
so part of: RPL15
location: join(3606692..3606863,3606965..3607101,3608291..3608596)
location: region:3606692-3608596:1
so has part: feature:3606692-3606863:1:exon
so has part: feature:3606965-3607101:1:exon
so has part: feature:3608291-3608596:1:exon

XP_017897331.1
type: Protein
SIO_000068: ncbiprotein

position:3606692:1
position: 3606692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3608596:1
position: 3608596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3606692-3606863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3606965-3607101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3608291-3608596:1:exon

RPL15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RPL15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L15
translation: MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITRPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR
SIO_010081: RPL15
subclass of: SO_0000673
so part of: RPL15
location: join(3606692..3606863,3606965..3607101,3608291..3608596)
location: region:3606692-3608596:1
so has part: feature:3606692-3606863:1:exon
so has part: feature:3606965-3607101:1:exon
so has part: feature:3608291-3608596:1:exon

XP_017897332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3606692-3606863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3606965-3607101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3608291-3608596:1:exon

NR1D2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: NR1D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3646595..3675846
location: region:3646595-3675846:1
so has part: feature:3646595-3675846:1:exon
subclass of: SO_0000010

102172867
type: Gene
SIO_000068: ncbigene

position:3646595:1
position: 3646595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3675846:1
position: 3675846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3646595-3675846:1:exon

NR1D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NR1D2
product: nuclear receptor subfamily 1 group D member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 34 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_018041999.1
SIO_010081: NR1D2
subclass of: SO_0000673
so part of: NR1D2
location: join(3646595..3646725,3656521..3656787,3657660..3657748,3659520..3659664,3661449..3662074,3663459..3663644,3665940..3666150,3672503..3675846)
location: region:3646595-3675846:1
so has part: feature:3646595-3646725:1:exon
so has part: feature:3656521-3656787:1:exon
so has part: feature:3657660-3657748:1:exon
so has part: feature:3659520-3659664:1:exon
so has part: feature:3661449-3662074:1:exon
so has part: feature:3663459-3663644:1:exon
so has part: feature:3665940-3666150:1:exon
so has part: feature:3672503-3675846:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3646595-3646725:1:exon

position:3646725:1
position: 3646725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3656521-3656787:1:exon

position:3656521:1
position: 3656521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3656787:1
position: 3656787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3657660-3657748:1:exon

position:3657660:1
position: 3657660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3657748:1
position: 3657748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3659520-3659664:1:exon

position:3659520:1
position: 3659520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3659664:1
position: 3659664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3661449-3662074:1:exon

position:3661449:1
position: 3661449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3662074:1
position: 3662074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3663459-3663644:1:exon

position:3663459:1
position: 3663459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3663644:1
position: 3663644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3665940-3666150:1:exon

position:3665940:1
position: 3665940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3666150:1
position: 3666150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3672503-3675846:1:exon

position:3672503:1
position: 3672503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR1D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NR1D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 1 group D member 2
translation: MEVNAGGVIAYISSSSSASSPASCHSEGSESSFQSASSSVPSSPNSTHSDSNGNPKNGDLSSIEGILKNDRIDCSMKTSKSSAPGVTKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMRTMMDSQLSGRLHSDPLADRHEQIALPAQEQPRPKPQLEPDHSKSSSPSSSDFAKEEVIGMVTRAHKDTFMYNQEPRESSAETAVPPRERLAKNLEQYSVNHEPCVGGPHGRFPCAESAQHLGGHYKGRSGVHYPGGHGVCVAGGHCVSFSGAYTQRVCDRVSIDGFSQNENKNGFLCNTGARMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSEELLAFKVHP
SIO_010081: NR1D2
subclass of: SO_0000673
so part of: NR1D2
location: join(3646710..3646725,3656521..3656787,3657660..3657748,3659520..3659664,3661449..3662074,3663459..3663644,3665940..3666150,3672503..3672699)
location: region:3646710-3672699:1
so has part: feature:3646710-3646725:1:exon
so has part: feature:3656521-3656787:1:exon
so has part: feature:3657660-3657748:1:exon
so has part: feature:3659520-3659664:1:exon
so has part: feature:3661449-3662074:1:exon
so has part: feature:3663459-3663644:1:exon
so has part: feature:3665940-3666150:1:exon
so has part: feature:3672503-3672699:1:exon

XP_017897488.1
type: Protein
SIO_000068: ncbiprotein

position:3646710:1
position: 3646710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3672699:1
position: 3672699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3646710-3646725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3656521-3656787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3657660-3657748:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3659520-3659664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3661449-3662074:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3663459-3663644:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3665940-3666150:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3672503-3672699:1:exon

LOC102180456
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102180456
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3749406..3750310)
location: region:3749406-3750310:-1
so has part: feature:3749406-3750310:-1:exon

102180456
type: Gene
SIO_000068: ncbigene

position:3749406:-1
position: 3749406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3750310:-1
position: 3750310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3749406-3750310:-1:exon

LOC102180456
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102180456
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102180456
subclass of: SO_0000673
so part of: LOC102180456
location: complement(3749406..3750310)
location: region:3749406-3750310:-1
so has part: feature:3749406-3750310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3749406-3750310:-1:exon

THRB
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: THRB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3763978..4201001)
location: region:3763978-4201001:-1
so has part: feature:3763978-4201001:-1:exon
subclass of: SO_0000010

102172237
type: Gene
SIO_000068: ncbigene

position:3763978:-1
position: 3763978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4201001:-1
position: 4201001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3763978-4201001:-1:exon

THRB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: THRB
product: thyroid hormone receptor beta, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 34 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041847.1
SIO_010081: THRB
subclass of: SO_0000673
so part of: THRB
location: complement(join(3763978..3768778,3773328..3773586,3779907..3780053,3789865..3790070,3793026..3793173,3798665..3798765,3847980..3848234,3885764..3885827,4013325..4013396,4200872..4201001))
location: region:3763978-4201001:-1
so has part: feature:4200872-4201001:-1:exon
so has part: feature:4013325-4013396:-1:exon
so has part: feature:3885764-3885827:-1:exon
so has part: feature:3847980-3848234:-1:exon
so has part: feature:3798665-3798765:-1:exon
so has part: feature:3793026-3793173:-1:exon
so has part: feature:3789865-3790070:-1:exon
so has part: feature:3779907-3780053:-1:exon
so has part: feature:3773328-3773586:-1:exon
so has part: feature:3763978-3768778:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4200872-4201001:-1:exon

position:4200872:-1
position: 4200872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4013325-4013396:-1:exon

position:4013325:-1
position: 4013325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4013396:-1
position: 4013396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3885764-3885827:-1:exon

position:3885764:-1
position: 3885764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3885827:-1
position: 3885827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3847980-3848234:-1:exon

position:3847980:-1
position: 3847980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3848234:-1
position: 3848234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3798665-3798765:-1:exon

position:3798665:-1
position: 3798665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3798765:-1
position: 3798765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3793026-3793173:-1:exon

position:3793026:-1
position: 3793026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3793173:-1
position: 3793173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3789865-3790070:-1:exon

position:3789865:-1
position: 3789865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3790070:-1
position: 3790070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3779907-3780053:-1:exon

position:3779907:-1
position: 3779907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3780053:-1
position: 3780053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3773328-3773586:-1:exon

position:3773328:-1
position: 3773328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3773586:-1
position: 3773586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3763978-3768778:-1:exon

position:3768778:-1
position: 3768778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

THRB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: THRB
product: thyroid hormone receptor beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 34 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_018041845.1
SIO_010081: THRB
subclass of: SO_0000673
so part of: THRB
location: complement(join(3763978..3768778,3773328..3773586,3779907..3780053,3789865..3790070,3793026..3793173,3798665..3798765,3847980..3848234,3885764..3885827,4013325..4013396,4200593..4200804))
location: region:3763978-4200804:-1
so has part: feature:4200593-4200804:-1:exon
so has part: feature:4013325-4013396:-1:exon
so has part: feature:3885764-3885827:-1:exon
so has part: feature:3847980-3848234:-1:exon
so has part: feature:3798665-3798765:-1:exon
so has part: feature:3793026-3793173:-1:exon
so has part: feature:3789865-3790070:-1:exon
so has part: feature:3779907-3780053:-1:exon
so has part: feature:3773328-3773586:-1:exon
so has part: feature:3763978-3768778:-1:exon

position:4200804:-1
position: 4200804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4200593-4200804:-1:exon

position:4200593:-1
position: 4200593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4013325-4013396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3885764-3885827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3847980-3848234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3798665-3798765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3793026-3793173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3789865-3790070:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3779907-3780053:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3773328-3773586:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3763978-3768778:-1:exon

THRB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: THRB
product: thyroid hormone receptor beta, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018041848.1
SIO_010081: THRB
subclass of: SO_0000673
so part of: THRB
location: complement(join(3763978..3768778,3773328..3773586,3779907..3780053,3789865..3790070,3793026..3793173,3798665..3798765,3885764..3885827,4013325..4013396,4199820..4200105))
location: region:3763978-4200105:-1
so has part: feature:4199820-4200105:-1:exon
so has part: feature:4013325-4013396:-1:exon
so has part: feature:3885764-3885827:-1:exon
so has part: feature:3798665-3798765:-1:exon
so has part: feature:3793026-3793173:-1:exon
so has part: feature:3789865-3790070:-1:exon
so has part: feature:3779907-3780053:-1:exon
so has part: feature:3773328-3773586:-1:exon
so has part: feature:3763978-3768778:-1:exon

position:4200105:-1
position: 4200105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4199820-4200105:-1:exon

position:4199820:-1
position: 4199820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4013325-4013396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3885764-3885827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3798665-3798765:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3793026-3793173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3789865-3790070:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3779907-3780053:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3773328-3773586:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3763978-3768778:-1:exon

THRB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: THRB
product: thyroid hormone receptor beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 34 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018041844.1
SIO_010081: THRB
subclass of: SO_0000673
so part of: THRB
location: complement(join(3763978..3768778,3773328..3773586,3779907..3780053,3789865..3790070,3793026..3793173,3798665..3798765,3847980..3848234,3885764..3885827,4013325..4013396,4199820..4200105))
location: region:3763978-4200105:-1
so has part: feature:4199820-4200105:-1:exon
so has part: feature:4013325-4013396:-1:exon
so has part: feature:3885764-3885827:-1:exon
so has part: feature:3847980-3848234:-1:exon
so has part: feature:3798665-3798765:-1:exon
so has part: feature:3793026-3793173:-1:exon
so has part: feature:3789865-3790070:-1:exon
so has part: feature:3779907-3780053:-1:exon
so has part: feature:3773328-3773586:-1:exon
so has part: feature:3763978-3768778:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4199820-4200105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4013325-4013396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3885764-3885827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3847980-3848234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3798665-3798765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3793026-3793173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3789865-3790070:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3779907-3780053:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3773328-3773586:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3763978-3768778:-1:exon

THRB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: THRB
product: thyroid hormone receptor beta, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 34 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_018041846.1
SIO_010081: THRB
subclass of: SO_0000673
so part of: THRB
location: complement(join(3763978..3768778,3773328..3773586,3779907..3780053,3789865..3790070,3793026..3793173,3798665..3798765,3847980..3848234,3885764..3885827,4013325..4013396,4199419..4199654))
location: region:3763978-4199654:-1
so has part: feature:4199419-4199654:-1:exon
so has part: feature:4013325-4013396:-1:exon
so has part: feature:3885764-3885827:-1:exon
so has part: feature:3847980-3848234:-1:exon
so has part: feature:3798665-3798765:-1:exon
so has part: feature:3793026-3793173:-1:exon
so has part: feature:3789865-3790070:-1:exon
so has part: feature:3779907-3780053:-1:exon
so has part: feature:3773328-3773586:-1:exon
so has part: feature:3763978-3768778:-1:exon

position:4199654:-1
position: 4199654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4199419-4199654:-1:exon

position:4199419:-1
position: 4199419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4013325-4013396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3885764-3885827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3847980-3848234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3798665-3798765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3793026-3793173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3789865-3790070:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3779907-3780053:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3773328-3773586:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3763978-3768778:-1:exon

THRB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: THRB
product: thyroid hormone receptor beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs, 16 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005698927.2
SIO_010081: THRB
subclass of: SO_0000673
so part of: THRB
location: complement(join(3763978..3768778,3773328..3773586,3779907..3780053,3789865..3790070,3793026..3793173,3798665..3798765,3817767..3818323))
location: region:3763978-3818323:-1
so has part: feature:3817767-3818323:-1:exon
so has part: feature:3798665-3798765:-1:exon
so has part: feature:3793026-3793173:-1:exon
so has part: feature:3789865-3790070:-1:exon
so has part: feature:3779907-3780053:-1:exon
so has part: feature:3773328-3773586:-1:exon
so has part: feature:3763978-3768778:-1:exon

position:3818323:-1
position: 3818323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3817767-3818323:-1:exon

position:3817767:-1
position: 3817767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3798665-3798765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3793026-3793173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3789865-3790070:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3779907-3780053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3773328-3773586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3763978-3768778:-1:exon

THRB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: THRB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor beta isoform X3
translation: MTPNSMTGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQRSMGHKPEPTDQEWELIKTVTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
SIO_010081: THRB
subclass of: SO_0000673
so part of: THRB
location: complement(join(3768537..3768778,3773328..3773586,3779907..3780053,3789865..3790070,3793026..3793173,3798665..3798765,3885764..3885785))
location: region:3768537-3885785:-1
so has part: feature:3885764-3885785:-1:exon
so has part: feature:3798665-3798765:-1:exon
so has part: feature:3793026-3793173:-1:exon
so has part: feature:3789865-3790070:-1:exon
so has part: feature:3779907-3780053:-1:exon
so has part: feature:3773328-3773586:-1:exon
so has part: feature:3768537-3768778:-1:exon

XP_017897337.1
type: Protein
SIO_000068: ncbiprotein

position:3768537:-1
position: 3768537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3885785:-1
position: 3885785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3885764-3885785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3798665-3798765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3793026-3793173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3789865-3790070:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3779907-3780053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3773328-3773586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3768537-3768778:-1:exon

THRB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: THRB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor beta isoform X2
translation: MTPNSMTENGLPAWDKPKPCPDGEPEWKLVGMSEACLHRKSHPERRGPLKHEQSPLIQASWTSSIFHLDHDDVSDQSAASAQPFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQRSMGHKPEPTDQEWELIKTVTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
SIO_010081: THRB
subclass of: SO_0000673
so part of: THRB
location: complement(join(3768537..3768778,3773328..3773586,3779907..3780053,3789865..3790070,3793026..3793173,3798665..3798765,3847980..3848234,3885764..3885785))
location: region:3768537-3885785:-1
so has part: feature:3885764-3885785:-1:exon
so has part: feature:3847980-3848234:-1:exon
so has part: feature:3798665-3798765:-1:exon
so has part: feature:3793026-3793173:-1:exon
so has part: feature:3789865-3790070:-1:exon
so has part: feature:3779907-3780053:-1:exon
so has part: feature:3773328-3773586:-1:exon
so has part: feature:3768537-3768778:-1:exon

XP_017897333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3885764-3885785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3847980-3848234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3798665-3798765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3793026-3793173:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3789865-3790070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3779907-3780053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3773328-3773586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3768537-3768778:-1:exon

THRB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: THRB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor beta isoform X2
translation: MTPNSMTENGLPAWDKPKPCPDGEPEWKLVGMSEACLHRKSHPERRGPLKHEQSPLIQASWTSSIFHLDHDDVSDQSAASAQPFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQRSMGHKPEPTDQEWELIKTVTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
SIO_010081: THRB
subclass of: SO_0000673
so part of: THRB
location: complement(join(3768537..3768778,3773328..3773586,3779907..3780053,3789865..3790070,3793026..3793173,3798665..3798765,3847980..3848234,3885764..3885785))
location: region:3768537-3885785:-1
so has part: feature:3885764-3885785:-1:exon
so has part: feature:3847980-3848234:-1:exon
so has part: feature:3798665-3798765:-1:exon
so has part: feature:3793026-3793173:-1:exon
so has part: feature:3789865-3790070:-1:exon
so has part: feature:3779907-3780053:-1:exon
so has part: feature:3773328-3773586:-1:exon
so has part: feature:3768537-3768778:-1:exon

XP_017897334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3885764-3885785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3847980-3848234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3798665-3798765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3793026-3793173:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3789865-3790070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3779907-3780053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3773328-3773586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3768537-3768778:-1:exon

THRB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: THRB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor beta isoform X2
translation: MTPNSMTENGLPAWDKPKPCPDGEPEWKLVGMSEACLHRKSHPERRGPLKHEQSPLIQASWTSSIFHLDHDDVSDQSAASAQPFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQRSMGHKPEPTDQEWELIKTVTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
SIO_010081: THRB
subclass of: SO_0000673
so part of: THRB
location: complement(join(3768537..3768778,3773328..3773586,3779907..3780053,3789865..3790070,3793026..3793173,3798665..3798765,3847980..3848234,3885764..3885785))
location: region:3768537-3885785:-1
so has part: feature:3885764-3885785:-1:exon
so has part: feature:3847980-3848234:-1:exon
so has part: feature:3798665-3798765:-1:exon
so has part: feature:3793026-3793173:-1:exon
so has part: feature:3789865-3790070:-1:exon
so has part: feature:3779907-3780053:-1:exon
so has part: feature:3773328-3773586:-1:exon
so has part: feature:3768537-3768778:-1:exon

XP_017897335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3885764-3885785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3847980-3848234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3798665-3798765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3793026-3793173:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3789865-3790070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3779907-3780053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3773328-3773586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3768537-3768778:-1:exon

THRB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: THRB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor beta isoform X2
translation: MTPNSMTENGLPAWDKPKPCPDGEPEWKLVGMSEACLHRKSHPERRGPLKHEQSPLIQASWTSSIFHLDHDDVSDQSAASAQPFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQRSMGHKPEPTDQEWELIKTVTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
SIO_010081: THRB
subclass of: SO_0000673
so part of: THRB
location: complement(join(3768537..3768778,3773328..3773586,3779907..3780053,3789865..3790070,3793026..3793173,3798665..3798765,3847980..3848234,3885764..3885785))
location: region:3768537-3885785:-1
so has part: feature:3885764-3885785:-1:exon
so has part: feature:3847980-3848234:-1:exon
so has part: feature:3798665-3798765:-1:exon
so has part: feature:3793026-3793173:-1:exon
so has part: feature:3789865-3790070:-1:exon
so has part: feature:3779907-3780053:-1:exon
so has part: feature:3773328-3773586:-1:exon
so has part: feature:3768537-3768778:-1:exon

XP_017897336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3885764-3885785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3847980-3848234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3798665-3798765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3793026-3793173:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3789865-3790070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3779907-3780053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3773328-3773586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3768537-3768778:-1:exon

THRB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: THRB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor beta isoform X1
translation: MNFCVQELYEAHPAAGSNCYMQATDYYAYFEDSPGYSGCNAQAVPSNNIYMEQAWAVNQPYTCSYPGNMLKSRDSDLDMALNQYSQPEYFTEEKPTFSQVQSPSYSQKKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQRSMGHKPEPTDQEWELIKTVTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
SIO_010081: THRB
subclass of: SO_0000673
so part of: THRB
location: complement(join(3768537..3768778,3773328..3773586,3779907..3780053,3789865..3790070,3793026..3793173,3798665..3798765,3817767..3818094))
location: region:3768537-3818094:-1
so has part: feature:3817767-3818094:-1:exon
so has part: feature:3798665-3798765:-1:exon
so has part: feature:3793026-3793173:-1:exon
so has part: feature:3789865-3790070:-1:exon
so has part: feature:3779907-3780053:-1:exon
so has part: feature:3773328-3773586:-1:exon
so has part: feature:3768537-3768778:-1:exon

XP_005698984.1
type: Protein
SIO_000068: ncbiprotein

position:3818094:-1
position: 3818094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3817767-3818094:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3798665-3798765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3793026-3793173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3789865-3790070:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3779907-3780053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3773328-3773586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3768537-3768778:-1:exon

RARB
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: RARB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5262380..5444953
location: region:5262380-5444953:1
so has part: feature:5262380-5444953:1:exon
subclass of: SO_0000010

102171952
type: Gene
SIO_000068: ncbigene

position:5262380:1
position: 5262380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5444953:1
position: 5444953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5262380-5444953:1:exon

RARB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RARB
product: retinoic acid receptor beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 9 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_013975483.2
SIO_010081: RARB
subclass of: SO_0000673
so part of: RARB
location: join(5262380..5262787,5297636..5297784,5343801..5343942,5417518..5417678,5423438..5423614,5440748..5440952,5441937..5442095,5443523..5444953)
location: region:5262380-5444953:1
so has part: feature:5262380-5262787:1:exon
so has part: feature:5297636-5297784:1:exon
so has part: feature:5343801-5343942:1:exon
so has part: feature:5417518-5417678:1:exon
so has part: feature:5423438-5423614:1:exon
so has part: feature:5440748-5440952:1:exon
so has part: feature:5441937-5442095:1:exon
so has part: feature:5443523-5444953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5262380-5262787:1:exon

position:5262787:1
position: 5262787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5297636-5297784:1:exon

position:5297636:1
position: 5297636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5297784:1
position: 5297784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5343801-5343942:1:exon

position:5343801:1
position: 5343801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5343942:1
position: 5343942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5417518-5417678:1:exon

position:5417518:1
position: 5417518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5417678:1
position: 5417678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5423438-5423614:1:exon

position:5423438:1
position: 5423438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5423614:1
position: 5423614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5440748-5440952:1:exon

position:5440748:1
position: 5440748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5440952:1
position: 5440952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5441937-5442095:1:exon

position:5441937:1
position: 5441937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5442095:1
position: 5442095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5443523-5444953:1:exon

position:5443523:1
position: 5443523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RARB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RARB
product: retinoic acid receptor beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 9 ESTs, 27 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005698926.3
SIO_010081: RARB
subclass of: SO_0000673
so part of: RARB
location: join(5262648..5263144,5297636..5297784,5343801..5343942,5417518..5417678,5423438..5423614,5440748..5440952,5441937..5442095,5443523..5444953)
location: region:5262648-5444953:1
so has part: feature:5262648-5263144:1:exon
so has part: feature:5297636-5297784:1:exon
so has part: feature:5343801-5343942:1:exon
so has part: feature:5417518-5417678:1:exon
so has part: feature:5423438-5423614:1:exon
so has part: feature:5440748-5440952:1:exon
so has part: feature:5441937-5442095:1:exon
so has part: feature:5443523-5444953:1:exon

position:5262648:1
position: 5262648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5262648-5263144:1:exon

position:5263144:1
position: 5263144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5297636-5297784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5343801-5343942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5417518-5417678:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5423438-5423614:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5440748-5440952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5441937-5442095:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5443523-5444953:1:exon

RARB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RARB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoic acid receptor beta isoform X1
translation: MFDCMDVLSVSPGRILDFYTASPSSCMLQEKALKACFSGLTQTEWQHRHTAQSIETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFAGQLLPLEMDDAETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSSSGHTAEPSPSVSPSSVEHSGVGQSPLLQ
SIO_010081: RARB
subclass of: SO_0000673
so part of: RARB
location: join(5262988..5263144,5297636..5297784,5343801..5343942,5417518..5417678,5423438..5423614,5440748..5440952,5441937..5442095,5443523..5443719)
location: region:5262988-5443719:1
so has part: feature:5262988-5263144:1:exon
so has part: feature:5297636-5297784:1:exon
so has part: feature:5343801-5343942:1:exon
so has part: feature:5417518-5417678:1:exon
so has part: feature:5423438-5423614:1:exon
so has part: feature:5440748-5440952:1:exon
so has part: feature:5441937-5442095:1:exon
so has part: feature:5443523-5443719:1:exon

XP_005698983.1
type: Protein
SIO_000068: ncbiprotein

position:5262988:1
position: 5262988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5443719:1
position: 5443719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5262988-5263144:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5297636-5297784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5343801-5343942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5417518-5417678:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5423438-5423614:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5440748-5440952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5441937-5442095:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5443523-5443719:1:exon

RARB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RARB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoic acid receptor beta isoform X2
translation: MIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFAGQLLPLEMDDAETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSSSGHTAEPSPSVSPSSVEHSGVGQSPLLQ
SIO_010081: RARB
subclass of: SO_0000673
so part of: RARB
location: join(5343831..5343942,5417518..5417678,5423438..5423614,5440748..5440952,5441937..5442095,5443523..5443719)
location: region:5343831-5443719:1
so has part: feature:5343831-5343942:1:exon
so has part: feature:5417518-5417678:1:exon
so has part: feature:5423438-5423614:1:exon
so has part: feature:5440748-5440952:1:exon
so has part: feature:5441937-5442095:1:exon
so has part: feature:5443523-5443719:1:exon

XP_013830937.1
type: Protein
SIO_000068: ncbiprotein

position:5343831:1
position: 5343831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5343831-5343942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5417518-5417678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5423438-5423614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5440748-5440952:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5441937-5442095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5443523-5443719:1:exon

TOP2B
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TOP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5444986..5507006)
location: region:5444986-5507006:-1
so has part: feature:5444986-5507006:-1:exon
subclass of: SO_0000010

102180187
type: Gene
SIO_000068: ncbigene

position:5444986:-1
position: 5444986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5507006:-1
position: 5507006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5444986-5507006:-1:exon

TOP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TOP2B
product: topoisomerase (DNA) II beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 94 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_018041906.1
SIO_010081: TOP2B
subclass of: SO_0000673
so part of: TOP2B
location: complement(join(5444986..5445485,5446347..5446441,5447845..5447964,5449362..5449472,5452780..5452859,5453754..5453955,5455730..5455891,5456103..5456244,5458544..5458738,5459988..5460071,5460227..5460382,5463147..5463238,5463387..5463582,5464563..5464763,5465359..5465493,5466994..5467225,5467998..5468146,5468348..5468469,5469956..5470070,5470167..5470259,5470844..5470953,5473177..5473282,5473364..5473474,5474592..5474717,5474861..5475018,5475333..5475471,5479256..5479393,5479479..5479580,5480985..5481158,5484357..5484569,5485263..5485360,5486187..5486332,5490451..5490514,5491836..5491926,5492867..5493022,5506886..5507006))
location: region:5444986-5507006:-1
so has part: feature:5506886-5507006:-1:exon
so has part: feature:5492867-5493022:-1:exon
so has part: feature:5491836-5491926:-1:exon
so has part: feature:5490451-5490514:-1:exon
so has part: feature:5486187-5486332:-1:exon
so has part: feature:5485263-5485360:-1:exon
so has part: feature:5484357-5484569:-1:exon
so has part: feature:5480985-5481158:-1:exon
so has part: feature:5479479-5479580:-1:exon
so has part: feature:5479256-5479393:-1:exon
so has part: feature:5475333-5475471:-1:exon
so has part: feature:5474861-5475018:-1:exon
so has part: feature:5474592-5474717:-1:exon
so has part: feature:5473364-5473474:-1:exon
so has part: feature:5473177-5473282:-1:exon
so has part: feature:5470844-5470953:-1:exon
so has part: feature:5470167-5470259:-1:exon
so has part: feature:5469956-5470070:-1:exon
so has part: feature:5468348-5468469:-1:exon
so has part: feature:5467998-5468146:-1:exon
so has part: feature:5466994-5467225:-1:exon
so has part: feature:5465359-5465493:-1:exon
so has part: feature:5464563-5464763:-1:exon
so has part: feature:5463387-5463582:-1:exon
so has part: feature:5463147-5463238:-1:exon
so has part: feature:5460227-5460382:-1:exon
so has part: feature:5459988-5460071:-1:exon
so has part: feature:5458544-5458738:-1:exon
so has part: feature:5456103-5456244:-1:exon
so has part: feature:5455730-5455891:-1:exon
so has part: feature:5453754-5453955:-1:exon
so has part: feature:5452780-5452859:-1:exon
so has part: feature:5449362-5449472:-1:exon
so has part: feature:5447845-5447964:-1:exon
so has part: feature:5446347-5446441:-1:exon
so has part: feature:5444986-5445485:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5506886-5507006:-1:exon

position:5506886:-1
position: 5506886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5492867-5493022:-1:exon

position:5492867:-1
position: 5492867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5493022:-1
position: 5493022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5491836-5491926:-1:exon

position:5491836:-1
position: 5491836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5491926:-1
position: 5491926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5490451-5490514:-1:exon

position:5490451:-1
position: 5490451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5490514:-1
position: 5490514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5486187-5486332:-1:exon

position:5486187:-1
position: 5486187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5486332:-1
position: 5486332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5485263-5485360:-1:exon

position:5485263:-1
position: 5485263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5485360:-1
position: 5485360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5484357-5484569:-1:exon

position:5484357:-1
position: 5484357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5484569:-1
position: 5484569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5480985-5481158:-1:exon

position:5480985:-1
position: 5480985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5481158:-1
position: 5481158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5479479-5479580:-1:exon

position:5479479:-1
position: 5479479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5479580:-1
position: 5479580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5479256-5479393:-1:exon

position:5479256:-1
position: 5479256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5479393:-1
position: 5479393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5475333-5475471:-1:exon

position:5475333:-1
position: 5475333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5475471:-1
position: 5475471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5474861-5475018:-1:exon

position:5474861:-1
position: 5474861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5475018:-1
position: 5475018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5474592-5474717:-1:exon

position:5474592:-1
position: 5474592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5474717:-1
position: 5474717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5473364-5473474:-1:exon

position:5473364:-1
position: 5473364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5473474:-1
position: 5473474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5473177-5473282:-1:exon

position:5473177:-1
position: 5473177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5473282:-1
position: 5473282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5470844-5470953:-1:exon

position:5470844:-1
position: 5470844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5470953:-1
position: 5470953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5470167-5470259:-1:exon

position:5470167:-1
position: 5470167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5470259:-1
position: 5470259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5469956-5470070:-1:exon

position:5469956:-1
position: 5469956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5470070:-1
position: 5470070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5468348-5468469:-1:exon

position:5468348:-1
position: 5468348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5468469:-1
position: 5468469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5467998-5468146:-1:exon

position:5467998:-1
position: 5467998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5468146:-1
position: 5468146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5466994-5467225:-1:exon

position:5466994:-1
position: 5466994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5467225:-1
position: 5467225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5465359-5465493:-1:exon

position:5465359:-1
position: 5465359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5465493:-1
position: 5465493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5464563-5464763:-1:exon

position:5464563:-1
position: 5464563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5464763:-1
position: 5464763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5463387-5463582:-1:exon

position:5463387:-1
position: 5463387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5463582:-1
position: 5463582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:5463147-5463238:-1:exon

position:5463147:-1
position: 5463147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5463238:-1
position: 5463238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:5460227-5460382:-1:exon

position:5460227:-1
position: 5460227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5460382:-1
position: 5460382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:5459988-5460071:-1:exon

position:5459988:-1
position: 5459988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5460071:-1
position: 5460071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:5458544-5458738:-1:exon

position:5458544:-1
position: 5458544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5458738:-1
position: 5458738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:5456103-5456244:-1:exon

position:5456103:-1
position: 5456103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5456244:-1
position: 5456244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:5455730-5455891:-1:exon

position:5455730:-1
position: 5455730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5455891:-1
position: 5455891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:5453754-5453955:-1:exon

position:5453754:-1
position: 5453754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5453955:-1
position: 5453955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:5452780-5452859:-1:exon

position:5452780:-1
position: 5452780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5452859:-1
position: 5452859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:5449362-5449472:-1:exon

position:5449362:-1
position: 5449362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5449472:-1
position: 5449472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:5447845-5447964:-1:exon

position:5447845:-1
position: 5447845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5447964:-1
position: 5447964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:5446347-5446441:-1:exon

position:5446347:-1
position: 5446347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5446441:-1
position: 5446441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:5444986-5445485:-1:exon

position:5445485:-1
position: 5445485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TOP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TOP2B
product: topoisomerase (DNA) II beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 77 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_018041907.1
SIO_010081: TOP2B
subclass of: SO_0000673
so part of: TOP2B
location: complement(join(5445002..5445485,5446347..5446441,5447845..5447949,5449362..5449472,5452780..5452859,5453754..5453955,5455730..5455891,5456103..5456244,5458544..5458738,5459988..5460071,5460227..5460382,5463147..5463238,5463387..5463582,5464563..5464763,5465359..5465493,5466994..5467225,5467998..5468146,5468348..5468469,5469956..5470070,5470167..5470259,5470844..5470953,5473177..5473282,5473364..5473474,5474592..5474717,5474861..5475018,5475333..5475471,5479256..5479393,5479479..5479580,5480985..5481158,5484357..5484569,5485263..5485360,5486187..5486332,5490451..5490514,5491836..5491926,5492867..5493037,5506886..5506990))
location: region:5445002-5506990:-1
so has part: feature:5506886-5506990:-1:exon
so has part: feature:5492867-5493037:-1:exon
so has part: feature:5491836-5491926:-1:exon
so has part: feature:5490451-5490514:-1:exon
so has part: feature:5486187-5486332:-1:exon
so has part: feature:5485263-5485360:-1:exon
so has part: feature:5484357-5484569:-1:exon
so has part: feature:5480985-5481158:-1:exon
so has part: feature:5479479-5479580:-1:exon
so has part: feature:5479256-5479393:-1:exon
so has part: feature:5475333-5475471:-1:exon
so has part: feature:5474861-5475018:-1:exon
so has part: feature:5474592-5474717:-1:exon
so has part: feature:5473364-5473474:-1:exon
so has part: feature:5473177-5473282:-1:exon
so has part: feature:5470844-5470953:-1:exon
so has part: feature:5470167-5470259:-1:exon
so has part: feature:5469956-5470070:-1:exon
so has part: feature:5468348-5468469:-1:exon
so has part: feature:5467998-5468146:-1:exon
so has part: feature:5466994-5467225:-1:exon
so has part: feature:5465359-5465493:-1:exon
so has part: feature:5464563-5464763:-1:exon
so has part: feature:5463387-5463582:-1:exon
so has part: feature:5463147-5463238:-1:exon
so has part: feature:5460227-5460382:-1:exon
so has part: feature:5459988-5460071:-1:exon
so has part: feature:5458544-5458738:-1:exon
so has part: feature:5456103-5456244:-1:exon
so has part: feature:5455730-5455891:-1:exon
so has part: feature:5453754-5453955:-1:exon
so has part: feature:5452780-5452859:-1:exon
so has part: feature:5449362-5449472:-1:exon
so has part: feature:5447845-5447949:-1:exon
so has part: feature:5446347-5446441:-1:exon
so has part: feature:5445002-5445485:-1:exon

position:5445002:-1
position: 5445002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5506990:-1
position: 5506990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5506886-5506990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5492867-5493037:-1:exon

position:5493037:-1
position: 5493037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5491836-5491926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5490451-5490514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5486187-5486332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5485263-5485360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5484357-5484569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5480985-5481158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5479479-5479580:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5479256-5479393:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5475333-5475471:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5474861-5475018:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5474592-5474717:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5473364-5473474:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5473177-5473282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5470844-5470953:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5470167-5470259:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5469956-5470070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5468348-5468469:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5467998-5468146:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5466994-5467225:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5465359-5465493:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5464563-5464763:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5463387-5463582:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5463147-5463238:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5460227-5460382:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5459988-5460071:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5458544-5458738:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5456103-5456244:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5455730-5455891:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5453754-5453955:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5452780-5452859:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5449362-5449472:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5447845-5447949:-1:exon

position:5447949:-1
position: 5447949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:5446347-5446441:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5445002-5445485:-1:exon

TOP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TOP2B
product: topoisomerase (DNA) II beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 94 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_018041905.1
SIO_010081: TOP2B
subclass of: SO_0000673
so part of: TOP2B
location: complement(join(5445002..5445485,5446347..5446441,5447845..5447964,5449362..5449472,5452780..5452859,5453754..5453955,5455730..5455891,5456103..5456244,5458544..5458738,5459988..5460071,5460227..5460382,5463147..5463238,5463387..5463582,5464563..5464763,5465359..5465493,5466994..5467225,5467998..5468146,5468348..5468469,5469956..5470070,5470167..5470259,5470844..5470953,5473177..5473282,5473364..5473474,5474592..5474717,5474861..5475018,5475333..5475471,5479256..5479393,5479479..5479580,5480985..5481158,5484357..5484569,5485263..5485360,5486187..5486332,5490451..5490514,5491836..5491926,5492867..5493037,5506886..5506990))
location: region:5445002-5506990:-1
so has part: feature:5506886-5506990:-1:exon
so has part: feature:5492867-5493037:-1:exon
so has part: feature:5491836-5491926:-1:exon
so has part: feature:5490451-5490514:-1:exon
so has part: feature:5486187-5486332:-1:exon
so has part: feature:5485263-5485360:-1:exon
so has part: feature:5484357-5484569:-1:exon
so has part: feature:5480985-5481158:-1:exon
so has part: feature:5479479-5479580:-1:exon
so has part: feature:5479256-5479393:-1:exon
so has part: feature:5475333-5475471:-1:exon
so has part: feature:5474861-5475018:-1:exon
so has part: feature:5474592-5474717:-1:exon
so has part: feature:5473364-5473474:-1:exon
so has part: feature:5473177-5473282:-1:exon
so has part: feature:5470844-5470953:-1:exon
so has part: feature:5470167-5470259:-1:exon
so has part: feature:5469956-5470070:-1:exon
so has part: feature:5468348-5468469:-1:exon
so has part: feature:5467998-5468146:-1:exon
so has part: feature:5466994-5467225:-1:exon
so has part: feature:5465359-5465493:-1:exon
so has part: feature:5464563-5464763:-1:exon
so has part: feature:5463387-5463582:-1:exon
so has part: feature:5463147-5463238:-1:exon
so has part: feature:5460227-5460382:-1:exon
so has part: feature:5459988-5460071:-1:exon
so has part: feature:5458544-5458738:-1:exon
so has part: feature:5456103-5456244:-1:exon
so has part: feature:5455730-5455891:-1:exon
so has part: feature:5453754-5453955:-1:exon
so has part: feature:5452780-5452859:-1:exon
so has part: feature:5449362-5449472:-1:exon
so has part: feature:5447845-5447964:-1:exon
so has part: feature:5446347-5446441:-1:exon
so has part: feature:5445002-5445485:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5506886-5506990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5492867-5493037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5491836-5491926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5490451-5490514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5486187-5486332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5485263-5485360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5484357-5484569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5480985-5481158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5479479-5479580:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5479256-5479393:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5475333-5475471:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5474861-5475018:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5474592-5474717:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5473364-5473474:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5473177-5473282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5470844-5470953:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5470167-5470259:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5469956-5470070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5468348-5468469:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5467998-5468146:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5466994-5467225:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5465359-5465493:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5464563-5464763:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5463387-5463582:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5463147-5463238:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5460227-5460382:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5459988-5460071:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5458544-5458738:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5456103-5456244:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5455730-5455891:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5453754-5453955:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5452780-5452859:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5449362-5449472:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5447845-5447964:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5446347-5446441:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5445002-5445485:-1:exon

TOP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TOP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA topoisomerase 2-beta isoform X2
translation: MAKAGGGGGGGVGAGGHGALTWVNNATKKEESETANKNDSSKKLSVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDVGMNCREVTFVPGLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKIKHFDGEDYTCITFQPDLSKFKMEKLDRDIVALMTRRAYDLAGSCKGVKVMFNGKKLPVNGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQPKSFGSKCQLSEKFFKAASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKNKQELSFYSIPEFDEWKKHIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYKNFKGTIQELGQNQYAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMSEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEESQNQHDDSSSDSGTPSGPDFNYILNMSLWSLTKEKVEELIKQRDAKGREVSDLKRKSPSDLWKEDLAAFVEELDKVEAQEREDVLAGMAGKAIKGKVGKPKVKKLQLEETMPSPYGRRVVPEITAMKADASKKLLKKRKGDLDTSAVKADFDEEFSGAVMEGGEEALTPPAPANKGPRPKREKKEPGTRVRKTPTSSGKPSAKKVKKRNPWSDDDSKSESDLEESEPVVIPRDSLLRRAAAERPKYTFDFSEEEDEDADDDDDNNDLEELKVKASPITNDGEDEFVPSDGLDKDEYTFSPGKSKATPEKSSHDKKSQDFGTLFSFPSYSQKSEDDSAKFDSNEEDSASVFSPSFGLKQTEKVPSKTVAAKKGKPSLDTAPKPKRAPKQKKVETVNSDSDSEFGVPKKTAPKGKGRGAKKRKASGSENEGDYNPGRKTSKPPSKKPKKTSFDEDSDVDLFPSDLTTEPPSLPRTGRARKEVKYFADSDEEDVDFAMFN
SIO_010081: TOP2B
subclass of: SO_0000673
so part of: TOP2B
location: complement(join(5445321..5445485,5446347..5446441,5447845..5447964,5449362..5449472,5452780..5452859,5453754..5453955,5455730..5455891,5456103..5456244,5458544..5458738,5459988..5460071,5460227..5460382,5463147..5463238,5463387..5463582,5464563..5464763,5465359..5465493,5466994..5467225,5467998..5468146,5468348..5468469,5469956..5470070,5470167..5470259,5470844..5470953,5473177..5473282,5473364..5473474,5474592..5474717,5474861..5475018,5475333..5475471,5479256..5479393,5479479..5479580,5480985..5481158,5484357..5484569,5485263..5485360,5486187..5486332,5490451..5490514,5491836..5491926,5492867..5493022,5506886..5506954))
location: region:5445321-5506954:-1
so has part: feature:5506886-5506954:-1:exon
so has part: feature:5492867-5493022:-1:exon
so has part: feature:5491836-5491926:-1:exon
so has part: feature:5490451-5490514:-1:exon
so has part: feature:5486187-5486332:-1:exon
so has part: feature:5485263-5485360:-1:exon
so has part: feature:5484357-5484569:-1:exon
so has part: feature:5480985-5481158:-1:exon
so has part: feature:5479479-5479580:-1:exon
so has part: feature:5479256-5479393:-1:exon
so has part: feature:5475333-5475471:-1:exon
so has part: feature:5474861-5475018:-1:exon
so has part: feature:5474592-5474717:-1:exon
so has part: feature:5473364-5473474:-1:exon
so has part: feature:5473177-5473282:-1:exon
so has part: feature:5470844-5470953:-1:exon
so has part: feature:5470167-5470259:-1:exon
so has part: feature:5469956-5470070:-1:exon
so has part: feature:5468348-5468469:-1:exon
so has part: feature:5467998-5468146:-1:exon
so has part: feature:5466994-5467225:-1:exon
so has part: feature:5465359-5465493:-1:exon
so has part: feature:5464563-5464763:-1:exon
so has part: feature:5463387-5463582:-1:exon
so has part: feature:5463147-5463238:-1:exon
so has part: feature:5460227-5460382:-1:exon
so has part: feature:5459988-5460071:-1:exon
so has part: feature:5458544-5458738:-1:exon
so has part: feature:5456103-5456244:-1:exon
so has part: feature:5455730-5455891:-1:exon
so has part: feature:5453754-5453955:-1:exon
so has part: feature:5452780-5452859:-1:exon
so has part: feature:5449362-5449472:-1:exon
so has part: feature:5447845-5447964:-1:exon
so has part: feature:5446347-5446441:-1:exon
so has part: feature:5445321-5445485:-1:exon

XP_017897395.1
type: Protein
SIO_000068: ncbiprotein

position:5445321:-1
position: 5445321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5506954:-1
position: 5506954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5506886-5506954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5492867-5493022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5491836-5491926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5490451-5490514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5486187-5486332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5485263-5485360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5484357-5484569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5480985-5481158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5479479-5479580:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5479256-5479393:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5475333-5475471:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5474861-5475018:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5474592-5474717:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5473364-5473474:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5473177-5473282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5470844-5470953:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5470167-5470259:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5469956-5470070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5468348-5468469:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5467998-5468146:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5466994-5467225:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5465359-5465493:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5464563-5464763:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5463387-5463582:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5463147-5463238:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5460227-5460382:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5459988-5460071:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5458544-5458738:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5456103-5456244:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5455730-5455891:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5453754-5453955:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5452780-5452859:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5449362-5449472:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5447845-5447964:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5446347-5446441:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5445321-5445485:-1:exon

TOP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TOP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA topoisomerase 2-beta isoform X3
translation: MAKAGGGGGGGVGAGGHGALTWVTLFDQNNATKKEESETANKNDSSKKLSVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDVGMNCREVTFVPGLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKIKHFDGEDYTCITFQPDLSKFKMEKLDRDIVALMTRRAYDLAGSCKGVKVMFNGKKLPVNGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQPKSFGSKCQLSEKFFKAASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKNKQELSFYSIPEFDEWKKHIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYKNFKGTIQELGQNQYAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMSEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEESQNQHDDSSSDSGTPSGPDFNYILNMSLWSLTKEKVEELIKQRDAKGREVSDLKRKSPSDLWKEDLAAFVEELDKVEAQEREDVLAGMAGKAIKGKVGKPKVKKLQLEETMPSPYGRRVVPEITAMKADASKKLLKKRKGDLDTSAVKADFDEEFSGAVMEGGEEALTPPAPANKGPRPKREKKEPGTRVRKTPTSSGKPSAKKVKKRNPWSDDDSKSESDLEESEPVVIPRDSLLRRAAAERPKYTFDFSEEEDEDADDDDDNNDLEELKVKASPITNDGEDEFVPSDGLDKDEYTFSPGKSKATPEKSSHDKKSQDFGTLFSFPSYSQKSEDDSAKFDSNEEDSASVFSPSFGLKQTEKVPSKTVAAKKDTAPKPKRAPKQKKVETVNSDSDSEFGVPKKTAPKGKGRGAKKRKASGSENEGDYNPGRKTSKPPSKKPKKTSFDEDSDVDLFPSDLTTEPPSLPRTGRARKEVKYFADSDEEDVDFAMFN
SIO_010081: TOP2B
subclass of: SO_0000673
so part of: TOP2B
location: complement(join(5445321..5445485,5446347..5446441,5447845..5447949,5449362..5449472,5452780..5452859,5453754..5453955,5455730..5455891,5456103..5456244,5458544..5458738,5459988..5460071,5460227..5460382,5463147..5463238,5463387..5463582,5464563..5464763,5465359..5465493,5466994..5467225,5467998..5468146,5468348..5468469,5469956..5470070,5470167..5470259,5470844..5470953,5473177..5473282,5473364..5473474,5474592..5474717,5474861..5475018,5475333..5475471,5479256..5479393,5479479..5479580,5480985..5481158,5484357..5484569,5485263..5485360,5486187..5486332,5490451..5490514,5491836..5491926,5492867..5493037,5506886..5506954))
location: region:5445321-5506954:-1
so has part: feature:5506886-5506954:-1:exon
so has part: feature:5492867-5493037:-1:exon
so has part: feature:5491836-5491926:-1:exon
so has part: feature:5490451-5490514:-1:exon
so has part: feature:5486187-5486332:-1:exon
so has part: feature:5485263-5485360:-1:exon
so has part: feature:5484357-5484569:-1:exon
so has part: feature:5480985-5481158:-1:exon
so has part: feature:5479479-5479580:-1:exon
so has part: feature:5479256-5479393:-1:exon
so has part: feature:5475333-5475471:-1:exon
so has part: feature:5474861-5475018:-1:exon
so has part: feature:5474592-5474717:-1:exon
so has part: feature:5473364-5473474:-1:exon
so has part: feature:5473177-5473282:-1:exon
so has part: feature:5470844-5470953:-1:exon
so has part: feature:5470167-5470259:-1:exon
so has part: feature:5469956-5470070:-1:exon
so has part: feature:5468348-5468469:-1:exon
so has part: feature:5467998-5468146:-1:exon
so has part: feature:5466994-5467225:-1:exon
so has part: feature:5465359-5465493:-1:exon
so has part: feature:5464563-5464763:-1:exon
so has part: feature:5463387-5463582:-1:exon
so has part: feature:5463147-5463238:-1:exon
so has part: feature:5460227-5460382:-1:exon
so has part: feature:5459988-5460071:-1:exon
so has part: feature:5458544-5458738:-1:exon
so has part: feature:5456103-5456244:-1:exon
so has part: feature:5455730-5455891:-1:exon
so has part: feature:5453754-5453955:-1:exon
so has part: feature:5452780-5452859:-1:exon
so has part: feature:5449362-5449472:-1:exon
so has part: feature:5447845-5447949:-1:exon
so has part: feature:5446347-5446441:-1:exon
so has part: feature:5445321-5445485:-1:exon

XP_017897396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5506886-5506954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5492867-5493037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5491836-5491926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5490451-5490514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5486187-5486332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5485263-5485360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5484357-5484569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5480985-5481158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5479479-5479580:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5479256-5479393:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5475333-5475471:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5474861-5475018:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5474592-5474717:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5473364-5473474:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5473177-5473282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5470844-5470953:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5470167-5470259:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5469956-5470070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5468348-5468469:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5467998-5468146:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5466994-5467225:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5465359-5465493:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5464563-5464763:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5463387-5463582:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5463147-5463238:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5460227-5460382:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5459988-5460071:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5458544-5458738:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5456103-5456244:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5455730-5455891:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5453754-5453955:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5452780-5452859:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5449362-5449472:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5447845-5447949:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5446347-5446441:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5445321-5445485:-1:exon

TOP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TOP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA topoisomerase 2-beta isoform X1
translation: MAKAGGGGGGGVGAGGHGALTWVTLFDQNNATKKEESETANKNDSSKKLSVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDVGMNCREVTFVPGLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKIKHFDGEDYTCITFQPDLSKFKMEKLDRDIVALMTRRAYDLAGSCKGVKVMFNGKKLPVNGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQPKSFGSKCQLSEKFFKAASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKNKQELSFYSIPEFDEWKKHIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYKNFKGTIQELGQNQYAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMSEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEESQNQHDDSSSDSGTPSGPDFNYILNMSLWSLTKEKVEELIKQRDAKGREVSDLKRKSPSDLWKEDLAAFVEELDKVEAQEREDVLAGMAGKAIKGKVGKPKVKKLQLEETMPSPYGRRVVPEITAMKADASKKLLKKRKGDLDTSAVKADFDEEFSGAVMEGGEEALTPPAPANKGPRPKREKKEPGTRVRKTPTSSGKPSAKKVKKRNPWSDDDSKSESDLEESEPVVIPRDSLLRRAAAERPKYTFDFSEEEDEDADDDDDNNDLEELKVKASPITNDGEDEFVPSDGLDKDEYTFSPGKSKATPEKSSHDKKSQDFGTLFSFPSYSQKSEDDSAKFDSNEEDSASVFSPSFGLKQTEKVPSKTVAAKKGKPSLDTAPKPKRAPKQKKVETVNSDSDSEFGVPKKTAPKGKGRGAKKRKASGSENEGDYNPGRKTSKPPSKKPKKTSFDEDSDVDLFPSDLTTEPPSLPRTGRARKEVKYFADSDEEDVDFAMFN
SIO_010081: TOP2B
subclass of: SO_0000673
so part of: TOP2B
location: complement(join(5445321..5445485,5446347..5446441,5447845..5447964,5449362..5449472,5452780..5452859,5453754..5453955,5455730..5455891,5456103..5456244,5458544..5458738,5459988..5460071,5460227..5460382,5463147..5463238,5463387..5463582,5464563..5464763,5465359..5465493,5466994..5467225,5467998..5468146,5468348..5468469,5469956..5470070,5470167..5470259,5470844..5470953,5473177..5473282,5473364..5473474,5474592..5474717,5474861..5475018,5475333..5475471,5479256..5479393,5479479..5479580,5480985..5481158,5484357..5484569,5485263..5485360,5486187..5486332,5490451..5490514,5491836..5491926,5492867..5493037,5506886..5506954))
location: region:5445321-5506954:-1
so has part: feature:5506886-5506954:-1:exon
so has part: feature:5492867-5493037:-1:exon
so has part: feature:5491836-5491926:-1:exon
so has part: feature:5490451-5490514:-1:exon
so has part: feature:5486187-5486332:-1:exon
so has part: feature:5485263-5485360:-1:exon
so has part: feature:5484357-5484569:-1:exon
so has part: feature:5480985-5481158:-1:exon
so has part: feature:5479479-5479580:-1:exon
so has part: feature:5479256-5479393:-1:exon
so has part: feature:5475333-5475471:-1:exon
so has part: feature:5474861-5475018:-1:exon
so has part: feature:5474592-5474717:-1:exon
so has part: feature:5473364-5473474:-1:exon
so has part: feature:5473177-5473282:-1:exon
so has part: feature:5470844-5470953:-1:exon
so has part: feature:5470167-5470259:-1:exon
so has part: feature:5469956-5470070:-1:exon
so has part: feature:5468348-5468469:-1:exon
so has part: feature:5467998-5468146:-1:exon
so has part: feature:5466994-5467225:-1:exon
so has part: feature:5465359-5465493:-1:exon
so has part: feature:5464563-5464763:-1:exon
so has part: feature:5463387-5463582:-1:exon
so has part: feature:5463147-5463238:-1:exon
so has part: feature:5460227-5460382:-1:exon
so has part: feature:5459988-5460071:-1:exon
so has part: feature:5458544-5458738:-1:exon
so has part: feature:5456103-5456244:-1:exon
so has part: feature:5455730-5455891:-1:exon
so has part: feature:5453754-5453955:-1:exon
so has part: feature:5452780-5452859:-1:exon
so has part: feature:5449362-5449472:-1:exon
so has part: feature:5447845-5447964:-1:exon
so has part: feature:5446347-5446441:-1:exon
so has part: feature:5445321-5445485:-1:exon

XP_017897394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5506886-5506954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5492867-5493037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5491836-5491926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5490451-5490514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5486187-5486332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5485263-5485360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5484357-5484569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5480985-5481158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5479479-5479580:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5479256-5479393:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5475333-5475471:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5474861-5475018:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5474592-5474717:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5473364-5473474:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5473177-5473282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5470844-5470953:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5470167-5470259:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5469956-5470070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5468348-5468469:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5467998-5468146:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5466994-5467225:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5465359-5465493:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5464563-5464763:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5463387-5463582:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5463147-5463238:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5460227-5460382:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5459988-5460071:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5458544-5458738:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5456103-5456244:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5455730-5455891:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5453754-5453955:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5452780-5452859:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5449362-5449472:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5447845-5447964:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5446347-5446441:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5445321-5445485:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5499749..5499820
location: region:5499749-5499820:1
so has part: feature:5499749-5499820:1:exon
subclass of: SO_0000663

108634112
type: Gene
SIO_000068: ncbigene

position:5499749:1
position: 5499749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5499820:1
position: 5499820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5499749-5499820:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5499782..5499784,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 5499749..5499820
location: region:5499749-5499820:1
so has part: feature:5499749-5499820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5499749-5499820:1:exon

NGLY1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: NGLY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5563154..5624041)
location: region:5563154-5624041:-1
so has part: feature:5563154-5624041:-1:exon
subclass of: SO_0000010

102171687
type: Gene
SIO_000068: ncbigene

position:5563154:-1
position: 5563154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5624041:-1
position: 5624041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5563154-5624041:-1:exon

NGLY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NGLY1
product: N-glycanase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 47 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_018041963.1
SIO_010081: NGLY1
subclass of: SO_0000673
so part of: NGLY1
location: complement(join(5563154..5564063,5564445..5564622,5570480..5570665,5576247..5576411,5578323..5578433,5580091..5580236,5581398..5581519,5584657..5584879,5592740..5592905,5610215..5610460,5616105..5616219,5623874..5624041))
location: region:5563154-5624041:-1
so has part: feature:5623874-5624041:-1:exon
so has part: feature:5616105-5616219:-1:exon
so has part: feature:5610215-5610460:-1:exon
so has part: feature:5592740-5592905:-1:exon
so has part: feature:5584657-5584879:-1:exon
so has part: feature:5581398-5581519:-1:exon
so has part: feature:5580091-5580236:-1:exon
so has part: feature:5578323-5578433:-1:exon
so has part: feature:5576247-5576411:-1:exon
so has part: feature:5570480-5570665:-1:exon
so has part: feature:5564445-5564622:-1:exon
so has part: feature:5563154-5564063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5623874-5624041:-1:exon

position:5623874:-1
position: 5623874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5616105-5616219:-1:exon

position:5616105:-1
position: 5616105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5616219:-1
position: 5616219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5610215-5610460:-1:exon

position:5610215:-1
position: 5610215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5610460:-1
position: 5610460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5592740-5592905:-1:exon

position:5592740:-1
position: 5592740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5592905:-1
position: 5592905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5584657-5584879:-1:exon

position:5584657:-1
position: 5584657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5584879:-1
position: 5584879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5581398-5581519:-1:exon

position:5581398:-1
position: 5581398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5581519:-1
position: 5581519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5580091-5580236:-1:exon

position:5580091:-1
position: 5580091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5580236:-1
position: 5580236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5578323-5578433:-1:exon

position:5578323:-1
position: 5578323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5578433:-1
position: 5578433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5576247-5576411:-1:exon

position:5576247:-1
position: 5576247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5576411:-1
position: 5576411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5570480-5570665:-1:exon

position:5570480:-1
position: 5570480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5570665:-1
position: 5570665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5564445-5564622:-1:exon

position:5564445:-1
position: 5564445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5564622:-1
position: 5564622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5563154-5564063:-1:exon

position:5564063:-1
position: 5564063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NGLY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NGLY1
product: N-glycanase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_018041964.1
SIO_010081: NGLY1
subclass of: SO_0000673
so part of: NGLY1
location: complement(join(5563154..5564063,5564445..5564622,5570480..5570665,5576247..5576411,5578323..5578433,5580091..5580236,5581398..5581519,5584657..5584879,5592740..5592905,5610215..5610460,5616105..5616219,5622589..5622998))
location: region:5563154-5622998:-1
so has part: feature:5622589-5622998:-1:exon
so has part: feature:5616105-5616219:-1:exon
so has part: feature:5610215-5610460:-1:exon
so has part: feature:5592740-5592905:-1:exon
so has part: feature:5584657-5584879:-1:exon
so has part: feature:5581398-5581519:-1:exon
so has part: feature:5580091-5580236:-1:exon
so has part: feature:5578323-5578433:-1:exon
so has part: feature:5576247-5576411:-1:exon
so has part: feature:5570480-5570665:-1:exon
so has part: feature:5564445-5564622:-1:exon
so has part: feature:5563154-5564063:-1:exon

position:5622998:-1
position: 5622998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5622589-5622998:-1:exon

position:5622589:-1
position: 5622589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5616105-5616219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5610215-5610460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5592740-5592905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5584657-5584879:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5581398-5581519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5580091-5580236:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5578323-5578433:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5576247-5576411:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5570480-5570665:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5564445-5564622:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5563154-5564063:-1:exon

NGLY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NGLY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase isoform X1
translation: MAAAAAAELGGSAGSASPAVAELCQNTPETFLEASRLLLTYADNILRNPNDEKYRSIRIGNTTFSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSEKSHKTELSQHLAPSSQLPTAPSSHPDGVTQPPGNSEGQASRPPVAPVVADNSVILKVLRSNIQHVLIYENLALQEKALACIPVQELKRRSQEKLSRARKLDKGTNVSEEDFLLLELLHWFKEEFFHWVNDIVCSKCGGQTKSRGESLLPNDEELKWGANRVEDHYCDACQLSNRFPRYNNPEKLLETRSGRCGEWANCFMLCCRALGFEARYVWDYTDHVWTEVYSPSQQRWLHCDSCEDVCDKPLLYEVGWGKKLSYIIAFSKDEVVDVTWRYSCKHEEVISRRTEIKEELLRETINGLNKQRQVSLSENRRKELLQRIIVELVEFISPKSPQPGELGGRTSGSLAWRVARGEAGPESKETLFIPSENEKISKQLHLCYNIVKNYYVRVSSNNQTISGWENGVWRMESIFRKVETDWNMVYLARKEGSSYAYISWKFECGSVGLKVDSISIRTSSQTFETGTVQWKLRSNAAHVELTGDKTLRSYHDFSGATEVILEAELSRGDGAVAWQHTQLFRQSLNDHEENCLEIIIKFSDL
SIO_010081: NGLY1
subclass of: SO_0000673
so part of: NGLY1
location: complement(join(5563888..5564063,5564445..5564622,5570480..5570665,5576247..5576411,5578323..5578433,5580091..5580236,5581398..5581519,5584657..5584879,5592740..5592905,5610215..5610460,5616105..5616219,5623874..5624013))
location: region:5563888-5624013:-1
so has part: feature:5623874-5624013:-1:exon
so has part: feature:5616105-5616219:-1:exon
so has part: feature:5610215-5610460:-1:exon
so has part: feature:5592740-5592905:-1:exon
so has part: feature:5584657-5584879:-1:exon
so has part: feature:5581398-5581519:-1:exon
so has part: feature:5580091-5580236:-1:exon
so has part: feature:5578323-5578433:-1:exon
so has part: feature:5576247-5576411:-1:exon
so has part: feature:5570480-5570665:-1:exon
so has part: feature:5564445-5564622:-1:exon
so has part: feature:5563888-5564063:-1:exon

XP_017897452.1
type: Protein
SIO_000068: ncbiprotein

position:5563888:-1
position: 5563888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5624013:-1
position: 5624013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5623874-5624013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5616105-5616219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5610215-5610460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5592740-5592905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5584657-5584879:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5581398-5581519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5580091-5580236:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5578323-5578433:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5576247-5576411:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5570480-5570665:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5564445-5564622:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5563888-5564063:-1:exon

NGLY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NGLY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase isoform X2
translation: MGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSEKSHKTELSQHLAPSSQLPTAPSSHPDGVTQPPGNSEGQASRPPVAPVVADNSVILKVLRSNIQHVLIYENLALQEKALACIPVQELKRRSQEKLSRARKLDKGTNVSEEDFLLLELLHWFKEEFFHWVNDIVCSKCGGQTKSRGESLLPNDEELKWGANRVEDHYCDACQLSNRFPRYNNPEKLLETRSGRCGEWANCFMLCCRALGFEARYVWDYTDHVWTEVYSPSQQRWLHCDSCEDVCDKPLLYEVGWGKKLSYIIAFSKDEVVDVTWRYSCKHEEVISRRTEIKEELLRETINGLNKQRQVSLSENRRKELLQRIIVELVEFISPKSPQPGELGGRTSGSLAWRVARGEAGPESKETLFIPSENEKISKQLHLCYNIVKNYYVRVSSNNQTISGWENGVWRMESIFRKVETDWNMVYLARKEGSSYAYISWKFECGSVGLKVDSISIRTSSQTFETGTVQWKLRSNAAHVELTGDKTLRSYHDFSGATEVILEAELSRGDGAVAWQHTQLFRQSLNDHEENCLEIIIKFSDL
SIO_010081: NGLY1
subclass of: SO_0000673
so part of: NGLY1
location: complement(join(5563888..5564063,5564445..5564622,5570480..5570665,5576247..5576411,5578323..5578433,5580091..5580236,5581398..5581519,5584657..5584879,5592740..5592905,5610215..5610460,5616105..5616119))
location: region:5563888-5616119:-1
so has part: feature:5616105-5616119:-1:exon
so has part: feature:5610215-5610460:-1:exon
so has part: feature:5592740-5592905:-1:exon
so has part: feature:5584657-5584879:-1:exon
so has part: feature:5581398-5581519:-1:exon
so has part: feature:5580091-5580236:-1:exon
so has part: feature:5578323-5578433:-1:exon
so has part: feature:5576247-5576411:-1:exon
so has part: feature:5570480-5570665:-1:exon
so has part: feature:5564445-5564622:-1:exon
so has part: feature:5563888-5564063:-1:exon

XP_017897453.1
type: Protein
SIO_000068: ncbiprotein

position:5616119:-1
position: 5616119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5616105-5616119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5610215-5610460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5592740-5592905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5584657-5584879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5581398-5581519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5580091-5580236:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5578323-5578433:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5576247-5576411:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5570480-5570665:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5564445-5564622:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5563888-5564063:-1:exon

NGLY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NGLY1
product: N-glycanase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018041965.1
SIO_010081: NGLY1
subclass of: SO_0000673
so part of: NGLY1
location: complement(join(5563998..5564063,5570480..5570665,5576247..5576411,5578323..5578433,5580091..5580236,5581398..5581519,5584657..5584879,5592740..5592905,5610215..5610460,5616105..5616219,5623874..5624041))
location: region:5563998-5624041:-1
so has part: feature:5623874-5624041:-1:exon
so has part: feature:5616105-5616219:-1:exon
so has part: feature:5610215-5610460:-1:exon
so has part: feature:5592740-5592905:-1:exon
so has part: feature:5584657-5584879:-1:exon
so has part: feature:5581398-5581519:-1:exon
so has part: feature:5580091-5580236:-1:exon
so has part: feature:5578323-5578433:-1:exon
so has part: feature:5576247-5576411:-1:exon
so has part: feature:5570480-5570665:-1:exon
so has part: feature:5563998-5564063:-1:exon

position:5563998:-1
position: 5563998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5623874-5624041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5616105-5616219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5610215-5610460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5592740-5592905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5584657-5584879:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5581398-5581519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5580091-5580236:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5578323-5578433:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5576247-5576411:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5570480-5570665:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5563998-5564063:-1:exon

NGLY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NGLY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase isoform X3
translation: MAAAAAAELGGSAGSASPAVAELCQNTPETFLEASRLLLTYADNILRNPNDEKYRSIRIGNTTFSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSEKSHKTELSQHLAPSSQLPTAPSSHPDGVTQPPGNSEGQASRPPVAPVVADNSVILKVLRSNIQHVLIYENLALQEKALACIPVQELKRRSQEKLSRARKLDKGTNVSEEDFLLLELLHWFKEEFFHWVNDIVCSKCGGQTKSRGESLLPNDEELKWGANRVEDHYCDACQLSNRFPRYNNPEKLLETRSGRCGEWANCFMLCCRALGFEARYVWDYTDHVWTEVYSPSQQRWLHCDSCEDVCDKPLLYEVGWGKKLSYIIAFSKDEVVDVTWRYSCKHEEVISRRTEIKEELLRETINGLNKQRQVSLSENRRKELLQRIIVELVEFISPKSPQPGELGGRTSGSLAWRVARGEAGPESKETLFIPSENEKISKQLHLCYNIVKNYYVRVSSNNQTISGWENGVWRMESIFRKVETDWNMIKRFAPITTFLGPLKLFSKQN
SIO_010081: NGLY1
subclass of: SO_0000673
so part of: NGLY1
location: complement(join(5563998..5564063,5570480..5570665,5576247..5576411,5578323..5578433,5580091..5580236,5581398..5581519,5584657..5584879,5592740..5592905,5610215..5610460,5616105..5616219,5623874..5624013))
location: region:5563998-5624013:-1
so has part: feature:5623874-5624013:-1:exon
so has part: feature:5616105-5616219:-1:exon
so has part: feature:5610215-5610460:-1:exon
so has part: feature:5592740-5592905:-1:exon
so has part: feature:5584657-5584879:-1:exon
so has part: feature:5581398-5581519:-1:exon
so has part: feature:5580091-5580236:-1:exon
so has part: feature:5578323-5578433:-1:exon
so has part: feature:5576247-5576411:-1:exon
so has part: feature:5570480-5570665:-1:exon
so has part: feature:5563998-5564063:-1:exon

XP_017897454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5623874-5624013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5616105-5616219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5610215-5610460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5592740-5592905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5584657-5584879:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5581398-5581519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5580091-5580236:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5578323-5578433:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5576247-5576411:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5570480-5570665:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5563998-5564063:-1:exon

LOC106503676
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5595866..5597547
location: region:5595866-5597547:1
so has part: feature:5595866-5597547:1:exon

106503676
type: Gene
SIO_000068: ncbigene

position:5595866:1
position: 5595866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5597547:1
position: 5597547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5595866-5597547:1:exon

LOC106503676
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC106503676
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC106503676
subclass of: SO_0000673
so part of: LOC106503676
location: 5595866..5597547
location: region:5595866-5597547:1
so has part: feature:5595866-5597547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5595866-5597547:1:exon

LOC108634086
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5626133..5629500
location: region:5626133-5629500:1
so has part: feature:5626133-5629500:1:exon
subclass of: SO_0000011

108634086
type: Gene
SIO_000068: ncbigene

position:5626133:1
position: 5626133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5629500:1
position: 5629500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5626133-5629500:1:exon

LOC108634086
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108634086
product: uncharacterized LOC108634086
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_001917367.1
SIO_010081: LOC108634086
subclass of: SO_0000673
so part of: LOC108634086
location: join(5626133..5628588,5629248..5629500)
location: region:5626133-5629500:1
so has part: feature:5626133-5628588:1:exon
so has part: feature:5629248-5629500:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5626133-5628588:1:exon

position:5628588:1
position: 5628588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5629248-5629500:1:exon

position:5629248:1
position: 5629248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OXSM
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: OXSM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5633516..5636933
location: region:5633516-5636933:1
so has part: feature:5633516-5636933:1:exon
subclass of: SO_0000010

100861103
type: Gene
SIO_000068: ncbigene

position:5633516:1
position: 5633516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5636933:1
position: 5636933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5633516-5636933:1:exon

OXSM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: OXSM
product: 3-oxoacyl-ACP synthase, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_018042130.1
SIO_010081: OXSM
subclass of: SO_0000673
so part of: OXSM
location: join(5633516..5633587,5634141..5635256,5636436..5636933)
location: region:5633516-5636933:1
so has part: feature:5633516-5633587:1:exon
so has part: feature:5634141-5635256:1:exon
so has part: feature:5636436-5636933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5633516-5633587:1:exon

position:5633587:1
position: 5633587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5634141-5635256:1:exon

position:5634141:1
position: 5634141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5635256:1
position: 5635256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5636436-5636933:1:exon

position:5636436:1
position: 5636436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OXSM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: OXSM
product: 3-oxoacyl-ACP synthase, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 32 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_018042131.1
SIO_010081: OXSM
subclass of: SO_0000673
so part of: OXSM
location: join(5633524..5633587,5634248..5635256,5636436..5636933)
location: region:5633524-5636933:1
so has part: feature:5633524-5633587:1:exon
so has part: feature:5634248-5635256:1:exon
so has part: feature:5636436-5636933:1:exon

position:5633524:1
position: 5633524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5633524-5633587:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5634248-5635256:1:exon

position:5634248:1
position: 5634248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5636436-5636933:1:exon

OXSM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: OXSM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
translation: MLSDGLQIFLRITKRHLLHARSCQRLVNERRFLATASAPGLRRRVVVTGIGLVTPLGVGTQLVWDRLVRGESGIVSLVGDEYQSIPCSVAAYVPRGCDEGQFNELNFVSKSDTKSVSPPTVMAIAAAELALKDAGWHPQSEADQAATGVAIGMGMVPLEVISETALTFQTKGYSKVSPFFVPKILVNMPAGQVSIRHKLKGPNHAVSTACTTGAHAVGDAFRFVAHGDADVMVAGGTDSCISPLSLAGFARARALSTNADPKSACRPFHPQRDGFVMGEGAAVLVLEEHGHALRRGARVYAEMVGYGLSGDAGHITAPDPGGEGAFRCMAAAVKDAGIQPEEVSYINAHATSTPLGDAAENKAIKQLFKDHAHALAISSTKGATGHLLGAAGAAEAAFTALACYHRKLPPTLNLDCTEPQFDLNYVPLKAQDWKAENRRIALTNSFGFGGTNATLCIAGM
SIO_010081: OXSM
subclass of: SO_0000673
so part of: OXSM
location: join(5634277..5635256,5636436..5636838)
location: region:5634277-5636838:1
so has part: feature:5634277-5635256:1:exon
so has part: feature:5636436-5636838:1:exon

XP_017897619.1
type: Protein
SIO_000068: ncbiprotein

position:5634277:1
position: 5634277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5636838:1
position: 5636838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5634277-5635256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5636436-5636838:1:exon

OXSM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: OXSM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
translation: MLSDGLQIFLRITKRHLLHARSCQRLVNERRFLATASAPGLRRRVVVTGIGLVTPLGVGTQLVWDRLVRGESGIVSLVGDEYQSIPCSVAAYVPRGCDEGQFNELNFVSKSDTKSVSPPTVMAIAAAELALKDAGWHPQSEADQAATGVAIGMGMVPLEVISETALTFQTKGYSKVSPFFVPKILVNMPAGQVSIRHKLKGPNHAVSTACTTGAHAVGDAFRFVAHGDADVMVAGGTDSCISPLSLAGFARARALSTNADPKSACRPFHPQRDGFVMGEGAAVLVLEEHGHALRRGARVYAEMVGYGLSGDAGHITAPDPGGEGAFRCMAAAVKDAGIQPEEVSYINAHATSTPLGDAAENKAIKQLFKDHAHALAISSTKGATGHLLGAAGAAEAAFTALACYHRKLPPTLNLDCTEPQFDLNYVPLKAQDWKAENRRIALTNSFGFGGTNATLCIAGM
SIO_010081: OXSM
subclass of: SO_0000673
so part of: OXSM
location: join(5634277..5635256,5636436..5636838)
location: region:5634277-5636838:1
so has part: feature:5634277-5635256:1:exon
so has part: feature:5636436-5636838:1:exon

XP_017897620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5634277-5635256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5636436-5636838:1:exon

LOC102179912
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102179912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5774045..5774879
location: region:5774045-5774879:1
so has part: feature:5774045-5774879:1:exon

102179912
type: Gene
SIO_000068: ncbigene

position:5774045:1
position: 5774045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5774879:1
position: 5774879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5774045-5774879:1:exon

LOC102179912
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102179912
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102179912
subclass of: SO_0000673
so part of: LOC102179912
location: 5774045..5774091
location: region:5774045-5774091:1
so has part: feature:5774045-5774091:1:exon

position:5774091:1
position: 5774091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5774045-5774091:1:exon

LOC102179912
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102179912
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102179912
subclass of: SO_0000673
so part of: LOC102179912
location: 5774446..5774879
location: region:5774446-5774879:1
so has part: feature:5774446-5774879:1:exon

position:5774446:1
position: 5774446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5774446-5774879:1:exon

LRRC3B
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LRRC3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6258618..6352920
location: region:6258618-6352920:1
so has part: feature:6258618-6352920:1:exon
subclass of: SO_0000010

102170941
type: Gene
SIO_000068: ncbigene

position:6258618:1
position: 6258618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6352920:1
position: 6352920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6258618-6352920:1:exon

LRRC3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LRRC3B
product: leucine rich repeat containing 3B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 8 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005698922.3
SIO_010081: LRRC3B
subclass of: SO_0000673
so part of: LRRC3B
location: join(6258618..6258767,6351655..6352920)
location: region:6258618-6352920:1
so has part: feature:6258618-6258767:1:exon
so has part: feature:6351655-6352920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6258618-6258767:1:exon

position:6258767:1
position: 6258767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6351655-6352920:1:exon

position:6351655:1
position: 6351655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRRC3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LRRC3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 3B
translation: MNLVDLWLTRSLSMCLLLQSFVLMILCFHSASMCPKGCLCSSSGGLNVTCSNANLKEIPRDLPPETVLLYLDSNQITSIPNEIFKDLHQLRVLNLSKNGIEFIDEHAFKGVAETLQTLDLSDNRIQSVHKNAFNNLKARARIANNPWHCDCTLQQVLRSMVSNHETAHSVICKTSVLDEHAGRPFLNAANDADLCNLPKKTTDYAMLVTMFGWFTMVISYVVYYVRQNQEDARRHLEYLKSLPSRQKKADEPDDISTVV
SIO_010081: LRRC3B
subclass of: SO_0000673
so part of: LRRC3B
location: 6351817..6352596
location: region:6351817-6352596:1
so has part: feature:6351817-6352596:1:exon

XP_005698979.1
type: Protein
SIO_000068: ncbiprotein

position:6351817:1
position: 6351817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6352596:1
position: 6352596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6351817-6352596:1:exon

LOC106503678
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503678
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6395996..6397631)
location: region:6395996-6397631:-1
so has part: feature:6395996-6397631:-1:exon

106503678
type: Gene
SIO_000068: ncbigene

position:6395996:-1
position: 6395996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6397631:-1
position: 6397631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6395996-6397631:-1:exon

LOC106503678
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC106503678
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC106503678
subclass of: SO_0000673
so part of: LOC106503678
location: complement(6395996..6396417)
location: region:6395996-6396417:-1
so has part: feature:6395996-6396417:-1:exon

position:6396417:-1
position: 6396417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6395996-6396417:-1:exon

LOC106503678
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC106503678
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC106503678
subclass of: SO_0000673
so part of: LOC106503678
location: complement(6396899)
location: region:6396899-6396899:-1
so has part: feature:6396899-6396899:-1:exon

position:6396899:-1
position: 6396899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6396899-6396899:-1:exon

LOC106503678
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC106503678
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC106503678
subclass of: SO_0000673
so part of: LOC106503678
location: complement(6397183..6397631)
location: region:6397183-6397631:-1
so has part: feature:6397183-6397631:-1:exon

position:6397183:-1
position: 6397183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6397183-6397631:-1:exon

LOC102169935
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102169935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6614158..6623913
location: region:6614158-6623913:1
so has part: feature:6614158-6623913:1:exon
subclass of: SO_0000010

102169935
type: Gene
SIO_000068: ncbigene

position:6614158:1
position: 6614158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6623913:1
position: 6623913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6614158-6623913:1:exon

LOC102169935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102169935
product: arylamine N-acetyltransferase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 23 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_018042098.1
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: join(6614158..6614226,6615209..6615534,6617698..6617986,6619038..6619118,6621507..6623913)
location: region:6614158-6623913:1
so has part: feature:6614158-6614226:1:exon
so has part: feature:6615209-6615534:1:exon
so has part: feature:6617698-6617986:1:exon
so has part: feature:6619038-6619118:1:exon
so has part: feature:6621507-6623913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6614158-6614226:1:exon

position:6614226:1
position: 6614226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6615209-6615534:1:exon

position:6615209:1
position: 6615209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6615534:1
position: 6615534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6617698-6617986:1:exon

position:6617698:1
position: 6617698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6617986:1
position: 6617986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6619038-6619118:1:exon

position:6619038:1
position: 6619038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6619118:1
position: 6619118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6621507-6623913:1:exon

position:6621507:1
position: 6621507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102169935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102169935
product: arylamine N-acetyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 23 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_018042096.1
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: join(6614158..6614226,6615209..6615534,6617698..6617941,6619038..6619118,6621507..6623913)
location: region:6614158-6623913:1
so has part: feature:6614158-6614226:1:exon
so has part: feature:6615209-6615534:1:exon
so has part: feature:6617698-6617941:1:exon
so has part: feature:6619038-6619118:1:exon
so has part: feature:6621507-6623913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6614158-6614226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6615209-6615534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6617698-6617941:1:exon

position:6617941:1
position: 6617941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6619038-6619118:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6621507-6623913:1:exon

LOC102169935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102169935
product: arylamine N-acetyltransferase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 23 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_018042099.1
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: join(6614158..6614226,6615209..6615534,6617698..6617933,6619038..6619118,6621507..6623913)
location: region:6614158-6623913:1
so has part: feature:6614158-6614226:1:exon
so has part: feature:6615209-6615534:1:exon
so has part: feature:6617698-6617933:1:exon
so has part: feature:6619038-6619118:1:exon
so has part: feature:6621507-6623913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6614158-6614226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6615209-6615534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6617698-6617933:1:exon

position:6617933:1
position: 6617933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6619038-6619118:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6621507-6623913:1:exon

LOC102169935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102169935
product: arylamine N-acetyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 23 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_018042097.1
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: join(6614158..6614226,6615209..6615534,6619038..6619118,6621507..6623913)
location: region:6614158-6623913:1
so has part: feature:6614158-6614226:1:exon
so has part: feature:6615209-6615534:1:exon
so has part: feature:6619038-6619118:1:exon
so has part: feature:6621507-6623913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6614158-6614226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6615209-6615534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6619038-6619118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6621507-6623913:1:exon

LOC102169935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102169935
product: arylamine N-acetyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 23 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_013975505.2
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: join(6614173..6614226,6617698..6617941,6619038..6619118,6621507..6623913)
location: region:6614173-6623913:1
so has part: feature:6614173-6614226:1:exon
so has part: feature:6617698-6617941:1:exon
so has part: feature:6619038-6619118:1:exon
so has part: feature:6621507-6623913:1:exon

position:6614173:1
position: 6614173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6614173-6614226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6617698-6617941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6619038-6619118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6621507-6623913:1:exon

LOC102169935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102169935
product: arylamine N-acetyltransferase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 23 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_013975506.2
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: join(6614175..6614226,6619038..6619118,6621507..6623913)
location: region:6614175-6623913:1
so has part: feature:6614175-6614226:1:exon
so has part: feature:6619038-6619118:1:exon
so has part: feature:6621507-6623913:1:exon

position:6614175:1
position: 6614175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6614175-6614226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6619038-6619118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6621507-6623913:1:exon

LOC102169935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102169935
product: arylamine N-acetyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 23 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_013975503.2
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: join(6614233..6615534,6617698..6617941,6619038..6619118,6621507..6623913)
location: region:6614233-6623913:1
so has part: feature:6614233-6615534:1:exon
so has part: feature:6617698-6617941:1:exon
so has part: feature:6619038-6619118:1:exon
so has part: feature:6621507-6623913:1:exon

position:6614233:1
position: 6614233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6614233-6615534:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6617698-6617941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6619038-6619118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6621507-6623913:1:exon

LOC102169935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102169935
product: arylamine N-acetyltransferase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 23 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_018042100.1
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: join(6618392..6618414,6619038..6619118,6621507..6623913)
location: region:6618392-6623913:1
so has part: feature:6618392-6618414:1:exon
so has part: feature:6619038-6619118:1:exon
so has part: feature:6621507-6623913:1:exon

position:6618392:1
position: 6618392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6618392-6618414:1:exon

position:6618414:1
position: 6618414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6619038-6619118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6621507-6623913:1:exon

LOC102169935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102169935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1
translation: MNIEAYFERIGYKNSRDKLDLETLADILQHQVQAIPFENLNIHCGEAMELDLEAIFDQIVRRNRGGWCLQVNHLLYWALTTIGFETTMLGGYVYNTFADKYSNAMIHLLLKVTIDGRDYIADAGFGRSYQMWQPLELISGKYQPQMPCIFRLTEERGTWYLDQIRREQYIPNQEFLDSDLLEKNEYRKIYSFTLEPRTIKDFESVNTYLQESPASVFTSKSFCSLQTPEGVHCLVGFTLTYRRFNYKDNTDLVEFKTLNEKEIEENLKSIFNISLEKKLIPKHGDKSFTI
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: 6621512..6622384
location: region:6621512-6622384:1
so has part: feature:6621512-6622384:1:exon

XP_017897585.1
type: Protein
SIO_000068: ncbiprotein

position:6621512:1
position: 6621512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6622384:1
position: 6622384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6621512-6622384:1:exon

LOC102169935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102169935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1
translation: MNIEAYFERIGYKNSRDKLDLETLADILQHQVQAIPFENLNIHCGEAMELDLEAIFDQIVRRNRGGWCLQVNHLLYWALTTIGFETTMLGGYVYNTFADKYSNAMIHLLLKVTIDGRDYIADAGFGRSYQMWQPLELISGKYQPQMPCIFRLTEERGTWYLDQIRREQYIPNQEFLDSDLLEKNEYRKIYSFTLEPRTIKDFESVNTYLQESPASVFTSKSFCSLQTPEGVHCLVGFTLTYRRFNYKDNTDLVEFKTLNEKEIEENLKSIFNISLEKKLIPKHGDKSFTI
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: 6621512..6622384
location: region:6621512-6622384:1
so has part: feature:6621512-6622384:1:exon

XP_017897586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6621512-6622384:1:exon

LOC102169935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102169935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1
translation: MNIEAYFERIGYKNSRDKLDLETLADILQHQVQAIPFENLNIHCGEAMELDLEAIFDQIVRRNRGGWCLQVNHLLYWALTTIGFETTMLGGYVYNTFADKYSNAMIHLLLKVTIDGRDYIADAGFGRSYQMWQPLELISGKYQPQMPCIFRLTEERGTWYLDQIRREQYIPNQEFLDSDLLEKNEYRKIYSFTLEPRTIKDFESVNTYLQESPASVFTSKSFCSLQTPEGVHCLVGFTLTYRRFNYKDNTDLVEFKTLNEKEIEENLKSIFNISLEKKLIPKHGDKSFTI
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: 6621512..6622384
location: region:6621512-6622384:1
so has part: feature:6621512-6622384:1:exon

XP_017897587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6621512-6622384:1:exon

LOC102169935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102169935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1
translation: MNIEAYFERIGYKNSRDKLDLETLADILQHQVQAIPFENLNIHCGEAMELDLEAIFDQIVRRNRGGWCLQVNHLLYWALTTIGFETTMLGGYVYNTFADKYSNAMIHLLLKVTIDGRDYIADAGFGRSYQMWQPLELISGKYQPQMPCIFRLTEERGTWYLDQIRREQYIPNQEFLDSDLLEKNEYRKIYSFTLEPRTIKDFESVNTYLQESPASVFTSKSFCSLQTPEGVHCLVGFTLTYRRFNYKDNTDLVEFKTLNEKEIEENLKSIFNISLEKKLIPKHGDKSFTI
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: 6621512..6622384
location: region:6621512-6622384:1
so has part: feature:6621512-6622384:1:exon

XP_017897588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6621512-6622384:1:exon

LOC102169935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102169935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1
translation: MNIEAYFERIGYKNSRDKLDLETLADILQHQVQAIPFENLNIHCGEAMELDLEAIFDQIVRRNRGGWCLQVNHLLYWALTTIGFETTMLGGYVYNTFADKYSNAMIHLLLKVTIDGRDYIADAGFGRSYQMWQPLELISGKYQPQMPCIFRLTEERGTWYLDQIRREQYIPNQEFLDSDLLEKNEYRKIYSFTLEPRTIKDFESVNTYLQESPASVFTSKSFCSLQTPEGVHCLVGFTLTYRRFNYKDNTDLVEFKTLNEKEIEENLKSIFNISLEKKLIPKHGDKSFTI
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: 6621512..6622384
location: region:6621512-6622384:1
so has part: feature:6621512-6622384:1:exon

XP_017897589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6621512-6622384:1:exon

LOC102169935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102169935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1
translation: MNIEAYFERIGYKNSRDKLDLETLADILQHQVQAIPFENLNIHCGEAMELDLEAIFDQIVRRNRGGWCLQVNHLLYWALTTIGFETTMLGGYVYNTFADKYSNAMIHLLLKVTIDGRDYIADAGFGRSYQMWQPLELISGKYQPQMPCIFRLTEERGTWYLDQIRREQYIPNQEFLDSDLLEKNEYRKIYSFTLEPRTIKDFESVNTYLQESPASVFTSKSFCSLQTPEGVHCLVGFTLTYRRFNYKDNTDLVEFKTLNEKEIEENLKSIFNISLEKKLIPKHGDKSFTI
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: 6621512..6622384
location: region:6621512-6622384:1
so has part: feature:6621512-6622384:1:exon

XP_013830957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6621512-6622384:1:exon

LOC102169935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102169935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1
translation: MNIEAYFERIGYKNSRDKLDLETLADILQHQVQAIPFENLNIHCGEAMELDLEAIFDQIVRRNRGGWCLQVNHLLYWALTTIGFETTMLGGYVYNTFADKYSNAMIHLLLKVTIDGRDYIADAGFGRSYQMWQPLELISGKYQPQMPCIFRLTEERGTWYLDQIRREQYIPNQEFLDSDLLEKNEYRKIYSFTLEPRTIKDFESVNTYLQESPASVFTSKSFCSLQTPEGVHCLVGFTLTYRRFNYKDNTDLVEFKTLNEKEIEENLKSIFNISLEKKLIPKHGDKSFTI
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: 6621512..6622384
location: region:6621512-6622384:1
so has part: feature:6621512-6622384:1:exon

XP_013830959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6621512-6622384:1:exon

LOC102169935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102169935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1
translation: MNIEAYFERIGYKNSRDKLDLETLADILQHQVQAIPFENLNIHCGEAMELDLEAIFDQIVRRNRGGWCLQVNHLLYWALTTIGFETTMLGGYVYNTFADKYSNAMIHLLLKVTIDGRDYIADAGFGRSYQMWQPLELISGKYQPQMPCIFRLTEERGTWYLDQIRREQYIPNQEFLDSDLLEKNEYRKIYSFTLEPRTIKDFESVNTYLQESPASVFTSKSFCSLQTPEGVHCLVGFTLTYRRFNYKDNTDLVEFKTLNEKEIEENLKSIFNISLEKKLIPKHGDKSFTI
SIO_010081: LOC102169935
subclass of: SO_0000673
so part of: LOC102169935
location: 6621512..6622384
location: region:6621512-6622384:1
so has part: feature:6621512-6622384:1:exon

XP_013830960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6621512-6622384:1:exon

LOC108634100
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6629020..6651847)
location: region:6629020-6651847:-1
so has part: feature:6629020-6651847:-1:exon
subclass of: SO_0000011

108634100
type: Gene
SIO_000068: ncbigene

position:6629020:-1
position: 6629020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6651847:-1
position: 6651847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6629020-6651847:-1:exon

LOC108634100
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108634100
product: uncharacterized LOC108634100
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001917378.1
SIO_010081: LOC108634100
subclass of: SO_0000673
so part of: LOC108634100
location: complement(join(6629020..6629355,6632277..6632438,6651762..6651847))
location: region:6629020-6651847:-1
so has part: feature:6651762-6651847:-1:exon
so has part: feature:6632277-6632438:-1:exon
so has part: feature:6629020-6629355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6651762-6651847:-1:exon

position:6651762:-1
position: 6651762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6632277-6632438:-1:exon

position:6632277:-1
position: 6632277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6632438:-1
position: 6632438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6629020-6629355:-1:exon

position:6629355:-1
position: 6629355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSD3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: PSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6679172..7168876)
location: region:6679172-7168876:-1
so has part: feature:6679172-7168876:-1:exon
subclass of: SO_0000010

102169072
type: Gene
SIO_000068: ncbigene

position:6679172:-1
position: 6679172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7168876:-1
position: 7168876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6679172-7168876:-1:exon

PSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PSD3
product: pleckstrin and Sec7 domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 101 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018041858.1
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: complement(join(6679172..6687060,6706377..6706520,6720239..6720383,6722857..6723014,6747453..6747523,6782549..6782742,6808011..6808054,6896841..6896930,6913998..6914056,6916848..6916960,6918608..6918688,6918846..6919040,6986821..6987216,6991181..6992216,7031954..7032062,7168067..7168876))
location: region:6679172-7168876:-1
so has part: feature:7168067-7168876:-1:exon
so has part: feature:7031954-7032062:-1:exon
so has part: feature:6991181-6992216:-1:exon
so has part: feature:6986821-6987216:-1:exon
so has part: feature:6918846-6919040:-1:exon
so has part: feature:6918608-6918688:-1:exon
so has part: feature:6916848-6916960:-1:exon
so has part: feature:6913998-6914056:-1:exon
so has part: feature:6896841-6896930:-1:exon
so has part: feature:6808011-6808054:-1:exon
so has part: feature:6782549-6782742:-1:exon
so has part: feature:6747453-6747523:-1:exon
so has part: feature:6722857-6723014:-1:exon
so has part: feature:6720239-6720383:-1:exon
so has part: feature:6706377-6706520:-1:exon
so has part: feature:6679172-6687060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7168067-7168876:-1:exon

position:7168067:-1
position: 7168067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7031954-7032062:-1:exon

position:7031954:-1
position: 7031954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7032062:-1
position: 7032062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6991181-6992216:-1:exon

position:6991181:-1
position: 6991181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6992216:-1
position: 6992216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6986821-6987216:-1:exon

position:6986821:-1
position: 6986821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6987216:-1
position: 6987216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6918846-6919040:-1:exon

position:6918846:-1
position: 6918846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6919040:-1
position: 6919040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6918608-6918688:-1:exon

position:6918608:-1
position: 6918608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6918688:-1
position: 6918688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6916848-6916960:-1:exon

position:6916848:-1
position: 6916848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6916960:-1
position: 6916960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6913998-6914056:-1:exon

position:6913998:-1
position: 6913998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6914056:-1
position: 6914056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6896841-6896930:-1:exon

position:6896841:-1
position: 6896841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6896930:-1
position: 6896930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6808011-6808054:-1:exon

position:6808011:-1
position: 6808011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6808054:-1
position: 6808054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6782549-6782742:-1:exon

position:6782549:-1
position: 6782549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6782742:-1
position: 6782742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6747453-6747523:-1:exon

position:6747453:-1
position: 6747453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6747523:-1
position: 6747523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6722857-6723014:-1:exon

position:6722857:-1
position: 6722857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6723014:-1
position: 6723014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6720239-6720383:-1:exon

position:6720239:-1
position: 6720239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6720383:-1
position: 6720383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6706377-6706520:-1:exon

position:6706377:-1
position: 6706377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6706520:-1
position: 6706520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6679172-6687060:-1:exon

position:6687060:-1
position: 6687060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PSD3
product: pleckstrin and Sec7 domain containing 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 101 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018041861.1
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: complement(join(6679172..6687060,6706377..6706520,6720239..6720383,6722857..6723014,6747453..6747523,6782549..6782742,6808011..6808054,6896841..6896930,6913998..6914056,6916848..6916960,6918608..6918688,6918846..6919040,6986821..6987216,6991181..6992216,7168067..7168135))
location: region:6679172-7168135:-1
so has part: feature:7168067-7168135:-1:exon
so has part: feature:6991181-6992216:-1:exon
so has part: feature:6986821-6987216:-1:exon
so has part: feature:6918846-6919040:-1:exon
so has part: feature:6918608-6918688:-1:exon
so has part: feature:6916848-6916960:-1:exon
so has part: feature:6913998-6914056:-1:exon
so has part: feature:6896841-6896930:-1:exon
so has part: feature:6808011-6808054:-1:exon
so has part: feature:6782549-6782742:-1:exon
so has part: feature:6747453-6747523:-1:exon
so has part: feature:6722857-6723014:-1:exon
so has part: feature:6720239-6720383:-1:exon
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position:7168135:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 15
SIO_000628: feature:6679172-6687060:-1:exon

PSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PSD3
product: pleckstrin and Sec7 domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 101 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_018041859.1
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: complement(join(6679172..6687060,6706377..6706520,6720239..6720383,6722857..6723014,6747453..6747523,6782549..6782742,6808011..6808054,6896841..6896930,6913998..6914056,6916848..6916960,6918608..6918688,6918846..6919040,6986821..6987216,6991181..6992216,7031954..7032062,7096317..7096448))
location: region:6679172-7096448:-1
so has part: feature:7096317-7096448:-1:exon
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so has part: feature:6720239-6720383:-1:exon
so has part: feature:6706377-6706520:-1:exon
so has part: feature:6679172-6687060:-1:exon

position:7096448:-1
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reference: sequence
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urn:…
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SIO_000628: feature:7096317-7096448:-1:exon

position:7096317:-1
position: 7096317
reference: sequence
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 16
SIO_000628: feature:6679172-6687060:-1:exon

PSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PSD3
product: pleckstrin and Sec7 domain containing 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 101 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041863.1
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: complement(join(6679172..6687060,6706377..6706520,6720239..6720383,6722857..6723014,6747453..6747523,6782549..6782742,6808011..6808054,6896841..6896930,6913998..6914056,6916848..6916960,6918608..6918688,6918846..6919040,6986821..6987216,6991181..6992216,7010259..7010348))
location: region:6679172-7010348:-1
so has part: feature:7010259-7010348:-1:exon
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so has part: feature:6782549-6782742:-1:exon
so has part: feature:6747453-6747523:-1:exon
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so has part: feature:6720239-6720383:-1:exon
so has part: feature:6706377-6706520:-1:exon
so has part: feature:6679172-6687060:-1:exon

position:7010348:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7010259-7010348:-1:exon

position:7010259:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 15
SIO_000628: feature:6679172-6687060:-1:exon

PSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PSD3
product: pleckstrin and Sec7 domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 101 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018041860.1
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: complement(join(6679172..6687060,6706377..6706520,6720239..6720383,6722857..6723014,6747453..6747523,6782549..6782742,6808011..6808054,6896841..6896930,6913998..6914056,6916848..6916960,6918608..6918688,6918846..6919040,6986821..6987216,6991181..6992216,7009945..7010212))
location: region:6679172-7010212:-1
so has part: feature:7009945-7010212:-1:exon
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so has part: feature:6720239-6720383:-1:exon
so has part: feature:6706377-6706520:-1:exon
so has part: feature:6679172-6687060:-1:exon

position:7010212:-1
position: 7010212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7009945-7010212:-1:exon

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urn:…
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urn:…
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PSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PSD3
product: pleckstrin and Sec7 domain containing 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 99 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_018041864.1
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: complement(join(6679172..6687060,6706377..6706520,6720239..6720383,6722857..6723014,6747453..6747523,6782549..6782742,6808011..6808054,6896841..6896930,6913998..6914056,6916848..6916960,6918608..6918688,6918846..6919040,6975624..6976126))
location: region:6679172-6976126:-1
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so has part: feature:6679172-6687060:-1:exon

position:6976126:-1
position: 6976126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6975624-6976126:-1:exon

position:6975624:-1
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urn:…
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urn:…
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SIO_000628: feature:6679172-6687060:-1:exon

PSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PSD3
product: pleckstrin and Sec7 domain containing 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 99 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018041865.1
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: complement(join(6679172..6687060,6706377..6706520,6720239..6720383,6722857..6723014,6747453..6747523,6782549..6782742,6808011..6808054,6896841..6896930,6913998..6914056,6916848..6916960,6918608..6918688,6918846..6919040,6922760..6922846))
location: region:6679172-6922846:-1
so has part: feature:6922760-6922846:-1:exon
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so has part: feature:6720239-6720383:-1:exon
so has part: feature:6706377-6706520:-1:exon
so has part: feature:6679172-6687060:-1:exon

position:6922846:-1
position: 6922846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6922760-6922846:-1:exon

position:6922760:-1
position: 6922760
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
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SIO_000628: feature:6679172-6687060:-1:exon

PSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH and SEC7 domain-containing protein 3 isoform X1
translation: MAERHQQTKTSFLFVQLRAPPARVRPAPAPARTAAAGGPEEGRPFPGPGAGSSAGGALGPPPRAGPPPPRPGRGTAAPAAPCCSAPAQGEEKTRALDARRGRARGPPGRRRSPAPASGARGRRQPRPCRPPSPAPGMADGGRSPSAGWTPWPDGPARPGPQARDASGCSLPQAQAADGAQSPGSRGGAEASARSPARPRSTQGAGTPARASRARLCRHRAPLQTSRSCAAPPAALPLKAETFVWVNNASAHSQSVAKAKYEFLFGRSEEKTPDTSDHGGSTLLPPNVTNEFPEYGTMEGSGEGLRASLEFDAESLLRCPGGPQGAQPLASRHSGPVTVTGGPKDIRGLPSQSHFKEPSLQPIDSLISALKATEARIASGTSQATKVLDGAAVSTFSAQQGGQEPDTASHKARKAHALFPAGCEKSPDIPLSAKVPTEEHFYLSIQEDLTALLTGETQAEPSLRASNGRKGAVHVQEPAGPASSVGSPATPSSAGGASLLRERRSDQREHPGQYARGRPGQGKHVAFQGVETPWTGGEEGENRHPEGVQMPPGRTAPPESKEFSKVPSHLVLSAALRDSAAPPERPCPAEPLLETVEDEVFLREDKEHLERRAEPERAGERILEQVEHFRGGDDDILGSGYAEDSTDVYSSQFETILDNTSLYYSAESLETLYSEPDSYFSFEMPLTPMIQQRIKEGGQFLERTSAGGQQDVLSISADGGIVMGCSSGIANGLSGSSNSIYSKGTPEITFWGSNAGVKTALLEAHSEMGSTEILEKEASGGLSNCTSSNIEAAKRLAKRLYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERERVLVHFSNRYFYCNPDTIASQDGVHCLTCAMMLLNTDLHGHNIGKKMTCQEFIANLQGVDEGGDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSVSEGADEKANGTHPKSISRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKALSEEDLKNAVSVHHALASQATDYEKKPNVLKLKTADWRVLLFQAQSLEEMQGWISKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLRQITTELAEHRSYPPDKKVKAKEVDEYKLKDHYLEFEKTRYEMYVRLLKEGGLELLSGGRGGPAGLKKSHSSPSLNPDTSPVTAKVKRNVSERKEHRPETPSIKQKVT
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: complement(join(6686845..6687060,6706377..6706520,6720239..6720383,6722857..6723014,6747453..6747523,6782549..6782742,6808011..6808054,6896841..6896930,6913998..6914056,6916848..6916960,6918608..6918688,6918846..6919040,6986821..6987216,6991181..6992216,7031954..7032062,7168067..7168780))
location: region:6686845-7168780:-1
so has part: feature:7168067-7168780:-1:exon
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XP_017897347.1
type: Protein
SIO_000068: ncbiprotein

position:6686845:-1
position: 6686845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7168780:-1
position: 7168780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7168067-7168780:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7031954-7032062:-1:exon

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SIO_000300: 3
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SIO_000300: 4
SIO_000628: feature:6986821-6987216:-1:exon

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urn:…
SIO_000300: 9
SIO_000628: feature:6896841-6896930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6808011-6808054:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6782549-6782742:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6747453-6747523:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6722857-6723014:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6720239-6720383:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6706377-6706520:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6686845-6687060:-1:exon

PSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH and SEC7 domain-containing protein 3 isoform X2
translation: MEGRDAAAETFVWVNNASAHSQSVAKAKYEFLFGRSEEKTPDTSDHGGSTLLPPNVTNEFPEYGTMEGSGEGLRASLEFDAESLLRCPGGPQGAQPLASRHSGPVTVTGGPKDIRGLPSQSHFKEPSLQPIDSLISALKATEARIASGTSQATKVLDGAAVSTFSAQQGGQEPDTASHKARKAHALFPAGCEKSPDIPLSAKVPTEEHFYLSIQEDLTALLTGETQAEPSLRASNGRKGAVHVQEPAGPASSVGSPATPSSAGGASLLRERRSDQREHPGQYARGRPGQGKHVAFQGVETPWTGGEEGENRHPEGVQMPPGRTAPPESKEFSKVPSHLVLSAALRDSAAPPERPCPAEPLLETVEDEVFLREDKEHLERRAEPERAGERILEQVEHFRGGDDDILGSGYAEDSTDVYSSQFETILDNTSLYYSAESLETLYSEPDSYFSFEMPLTPMIQQRIKEGGQFLERTSAGGQQDVLSISADGGIVMGCSSGIANGLSGSSNSIYSKGTPEITFWGSNAGVKTALLEAHSEMGSTEILEKEASGGLSNCTSSNIEAAKRLAKRLYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERERVLVHFSNRYFYCNPDTIASQDGVHCLTCAMMLLNTDLHGHNIGKKMTCQEFIANLQGVDEGGDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSVSEGADEKANGTHPKSISRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKALSEEDLKNAVSVHHALASQATDYEKKPNVLKLKTADWRVLLFQAQSLEEMQGWISKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLRQITTELAEHRSYPPDKKVKAKEVDEYKLKDHYLEFEKTRYEMYVRLLKEGGLELLSGGRGGPAGLKKSHSSPSLNPDTSPVTAKVKRNVSERKEHRPETPSIKQKVT
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: complement(join(6686845..6687060,6706377..6706520,6720239..6720383,6722857..6723014,6747453..6747523,6782549..6782742,6808011..6808054,6896841..6896930,6913998..6914056,6916848..6916960,6918608..6918688,6918846..6919040,6986821..6987216,6991181..6992216,7031954..7032062,7096317..7096337))
location: region:6686845-7096337:-1
so has part: feature:7096317-7096337:-1:exon
so has part: feature:7031954-7032062:-1:exon
so has part: feature:6991181-6992216:-1:exon
so has part: feature:6986821-6987216:-1:exon
so has part: feature:6918846-6919040:-1:exon
so has part: feature:6918608-6918688:-1:exon
so has part: feature:6916848-6916960:-1:exon
so has part: feature:6913998-6914056:-1:exon
so has part: feature:6896841-6896930:-1:exon
so has part: feature:6808011-6808054:-1:exon
so has part: feature:6782549-6782742:-1:exon
so has part: feature:6747453-6747523:-1:exon
so has part: feature:6722857-6723014:-1:exon
so has part: feature:6720239-6720383:-1:exon
so has part: feature:6706377-6706520:-1:exon
so has part: feature:6686845-6687060:-1:exon

XP_017897348.1
type: Protein
SIO_000068: ncbiprotein

position:7096337:-1
position: 7096337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7096317-7096337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7031954-7032062:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6991181-6992216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6986821-6987216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6918846-6919040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6918608-6918688:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6916848-6916960:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6913998-6914056:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6896841-6896930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6808011-6808054:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6782549-6782742:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6747453-6747523:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6722857-6723014:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6720239-6720383:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6706377-6706520:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6686845-6687060:-1:exon

PSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH and SEC7 domain-containing protein 3 isoform X3
translation: MGNCWSYSNLCDHGGSTLLPPNVTNEFPEYGTMEGSGEGLRASLEFDAESLLRCPGGPQGAQPLASRHSGPVTVTGGPKDIRGLPSQSHFKEPSLQPIDSLISALKATEARIASGTSQATKVLDGAAVSTFSAQQGGQEPDTASHKARKAHALFPAGCEKSPDIPLSAKVPTEEHFYLSIQEDLTALLTGETQAEPSLRASNGRKGAVHVQEPAGPASSVGSPATPSSAGGASLLRERRSDQREHPGQYARGRPGQGKHVAFQGVETPWTGGEEGENRHPEGVQMPPGRTAPPESKEFSKVPSHLVLSAALRDSAAPPERPCPAEPLLETVEDEVFLREDKEHLERRAEPERAGERILEQVEHFRGGDDDILGSGYAEDSTDVYSSQFETILDNTSLYYSAESLETLYSEPDSYFSFEMPLTPMIQQRIKEGGQFLERTSAGGQQDVLSISADGGIVMGCSSGIANGLSGSSNSIYSKGTPEITFWGSNAGVKTALLEAHSEMGSTEILEKEASGGLSNCTSSNIEAAKRLAKRLYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERERVLVHFSNRYFYCNPDTIASQDGVHCLTCAMMLLNTDLHGHNIGKKMTCQEFIANLQGVDEGGDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSVSEGADEKANGTHPKSISRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKALSEEDLKNAVSVHHALASQATDYEKKPNVLKLKTADWRVLLFQAQSLEEMQGWISKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLRQITTELAEHRSYPPDKKVKAKEVDEYKLKDHYLEFEKTRYEMYVRLLKEGGLELLSGGRGGPAGLKKSHSSPSLNPDTSPVTAKVKRNVSERKEHRPETPSIKQKVT
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: complement(join(6686845..6687060,6706377..6706520,6720239..6720383,6722857..6723014,6747453..6747523,6782549..6782742,6808011..6808054,6896841..6896930,6913998..6914056,6916848..6916960,6918608..6918688,6918846..6919040,6986821..6987216,6991181..6992216,7009945..7009975))
location: region:6686845-7009975:-1
so has part: feature:7009945-7009975:-1:exon
so has part: feature:6991181-6992216:-1:exon
so has part: feature:6986821-6987216:-1:exon
so has part: feature:6918846-6919040:-1:exon
so has part: feature:6918608-6918688:-1:exon
so has part: feature:6916848-6916960:-1:exon
so has part: feature:6913998-6914056:-1:exon
so has part: feature:6896841-6896930:-1:exon
so has part: feature:6808011-6808054:-1:exon
so has part: feature:6782549-6782742:-1:exon
so has part: feature:6747453-6747523:-1:exon
so has part: feature:6722857-6723014:-1:exon
so has part: feature:6720239-6720383:-1:exon
so has part: feature:6706377-6706520:-1:exon
so has part: feature:6686845-6687060:-1:exon

XP_017897349.1
type: Protein
SIO_000068: ncbiprotein

position:7009975:-1
position: 7009975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7009945-7009975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6991181-6992216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6986821-6987216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6918846-6919040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6918608-6918688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6916848-6916960:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6913998-6914056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6896841-6896930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6808011-6808054:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6782549-6782742:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6747453-6747523:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6722857-6723014:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6720239-6720383:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6706377-6706520:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6686845-6687060:-1:exon

PSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH and SEC7 domain-containing protein 3 isoform X4
translation: MEGSGEGLRASLEFDAESLLRCPGGPQGAQPLASRHSGPVTVTGGPKDIRGLPSQSHFKEPSLQPIDSLISALKATEARIASGTSQATKVLDGAAVSTFSAQQGGQEPDTASHKARKAHALFPAGCEKSPDIPLSAKVPTEEHFYLSIQEDLTALLTGETQAEPSLRASNGRKGAVHVQEPAGPASSVGSPATPSSAGGASLLRERRSDQREHPGQYARGRPGQGKHVAFQGVETPWTGGEEGENRHPEGVQMPPGRTAPPESKEFSKVPSHLVLSAALRDSAAPPERPCPAEPLLETVEDEVFLREDKEHLERRAEPERAGERILEQVEHFRGGDDDILGSGYAEDSTDVYSSQFETILDNTSLYYSAESLETLYSEPDSYFSFEMPLTPMIQQRIKEGGQFLERTSAGGQQDVLSISADGGIVMGCSSGIANGLSGSSNSIYSKGTPEITFWGSNAGVKTALLEAHSEMGSTEILEKEASGGLSNCTSSNIEAAKRLAKRLYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERERVLVHFSNRYFYCNPDTIASQDGVHCLTCAMMLLNTDLHGHNIGKKMTCQEFIANLQGVDEGGDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSVSEGADEKANGTHPKSISRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKALSEEDLKNAVSVHHALASQATDYEKKPNVLKLKTADWRVLLFQAQSLEEMQGWISKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLRQITTELAEHRSYPPDKKVKAKEVDEYKLKDHYLEFEKTRYEMYVRLLKEGGLELLSGGRGGPAGLKKSHSSPSLNPDTSPVTAKVKRNVSERKEHRPETPSIKQKVT
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: complement(join(6686845..6687060,6706377..6706520,6720239..6720383,6722857..6723014,6747453..6747523,6782549..6782742,6808011..6808054,6896841..6896930,6913998..6914056,6916848..6916960,6918608..6918688,6918846..6919040,6986821..6987216,6991181..6992151))
location: region:6686845-6992151:-1
so has part: feature:6991181-6992151:-1:exon
so has part: feature:6986821-6987216:-1:exon
so has part: feature:6918846-6919040:-1:exon
so has part: feature:6918608-6918688:-1:exon
so has part: feature:6916848-6916960:-1:exon
so has part: feature:6913998-6914056:-1:exon
so has part: feature:6896841-6896930:-1:exon
so has part: feature:6808011-6808054:-1:exon
so has part: feature:6782549-6782742:-1:exon
so has part: feature:6747453-6747523:-1:exon
so has part: feature:6722857-6723014:-1:exon
so has part: feature:6720239-6720383:-1:exon
so has part: feature:6706377-6706520:-1:exon
so has part: feature:6686845-6687060:-1:exon

XP_017897350.1
type: Protein
SIO_000068: ncbiprotein

position:6992151:-1
position: 6992151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6991181-6992151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6986821-6987216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6918846-6919040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6918608-6918688:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6916848-6916960:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6913998-6914056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6896841-6896930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6808011-6808054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6782549-6782742:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6747453-6747523:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6722857-6723014:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6720239-6720383:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6706377-6706520:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6686845-6687060:-1:exon

PSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH and SEC7 domain-containing protein 3 isoform X4
translation: MEGSGEGLRASLEFDAESLLRCPGGPQGAQPLASRHSGPVTVTGGPKDIRGLPSQSHFKEPSLQPIDSLISALKATEARIASGTSQATKVLDGAAVSTFSAQQGGQEPDTASHKARKAHALFPAGCEKSPDIPLSAKVPTEEHFYLSIQEDLTALLTGETQAEPSLRASNGRKGAVHVQEPAGPASSVGSPATPSSAGGASLLRERRSDQREHPGQYARGRPGQGKHVAFQGVETPWTGGEEGENRHPEGVQMPPGRTAPPESKEFSKVPSHLVLSAALRDSAAPPERPCPAEPLLETVEDEVFLREDKEHLERRAEPERAGERILEQVEHFRGGDDDILGSGYAEDSTDVYSSQFETILDNTSLYYSAESLETLYSEPDSYFSFEMPLTPMIQQRIKEGGQFLERTSAGGQQDVLSISADGGIVMGCSSGIANGLSGSSNSIYSKGTPEITFWGSNAGVKTALLEAHSEMGSTEILEKEASGGLSNCTSSNIEAAKRLAKRLYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERERVLVHFSNRYFYCNPDTIASQDGVHCLTCAMMLLNTDLHGHNIGKKMTCQEFIANLQGVDEGGDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSVSEGADEKANGTHPKSISRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKALSEEDLKNAVSVHHALASQATDYEKKPNVLKLKTADWRVLLFQAQSLEEMQGWISKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLRQITTELAEHRSYPPDKKVKAKEVDEYKLKDHYLEFEKTRYEMYVRLLKEGGLELLSGGRGGPAGLKKSHSSPSLNPDTSPVTAKVKRNVSERKEHRPETPSIKQKVT
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: complement(join(6686845..6687060,6706377..6706520,6720239..6720383,6722857..6723014,6747453..6747523,6782549..6782742,6808011..6808054,6896841..6896930,6913998..6914056,6916848..6916960,6918608..6918688,6918846..6919040,6986821..6987216,6991181..6992151))
location: region:6686845-6992151:-1
so has part: feature:6991181-6992151:-1:exon
so has part: feature:6986821-6987216:-1:exon
so has part: feature:6918846-6919040:-1:exon
so has part: feature:6918608-6918688:-1:exon
so has part: feature:6916848-6916960:-1:exon
so has part: feature:6913998-6914056:-1:exon
so has part: feature:6896841-6896930:-1:exon
so has part: feature:6808011-6808054:-1:exon
so has part: feature:6782549-6782742:-1:exon
so has part: feature:6747453-6747523:-1:exon
so has part: feature:6722857-6723014:-1:exon
so has part: feature:6720239-6720383:-1:exon
so has part: feature:6706377-6706520:-1:exon
so has part: feature:6686845-6687060:-1:exon

XP_017897352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6991181-6992151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6986821-6987216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6918846-6919040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6918608-6918688:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6916848-6916960:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6913998-6914056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6896841-6896930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6808011-6808054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6782549-6782742:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6747453-6747523:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6722857-6723014:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6720239-6720383:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6706377-6706520:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6686845-6687060:-1:exon

PSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH and SEC7 domain-containing protein 3 isoform X5
translation: MPVAPLTASRQAACWRRSNAGVKTALLEAHSEMGSTEILEKEASGGLSNCTSSNIEAAKRLAKRLYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERERVLVHFSNRYFYCNPDTIASQDGVHCLTCAMMLLNTDLHGHNIGKKMTCQEFIANLQGVDEGGDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSVSEGADEKANGTHPKSISRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKALSEEDLKNAVSVHHALASQATDYEKKPNVLKLKTADWRVLLFQAQSLEEMQGWISKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLRQITTELAEHRSYPPDKKVKAKEVDEYKLKDHYLEFEKTRYEMYVRLLKEGGLELLSGGRGGPAGLKKSHSSPSLNPDTSPVTAKVKRNVSERKEHRPETPSIKQKVT
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: complement(join(6686845..6687060,6706377..6706520,6720239..6720383,6722857..6723014,6747453..6747523,6782549..6782742,6808011..6808054,6896841..6896930,6913998..6914056,6916848..6916960,6918608..6918688,6918846..6919040,6975624..6975676))
location: region:6686845-6975676:-1
so has part: feature:6975624-6975676:-1:exon
so has part: feature:6918846-6919040:-1:exon
so has part: feature:6918608-6918688:-1:exon
so has part: feature:6916848-6916960:-1:exon
so has part: feature:6913998-6914056:-1:exon
so has part: feature:6896841-6896930:-1:exon
so has part: feature:6808011-6808054:-1:exon
so has part: feature:6782549-6782742:-1:exon
so has part: feature:6747453-6747523:-1:exon
so has part: feature:6722857-6723014:-1:exon
so has part: feature:6720239-6720383:-1:exon
so has part: feature:6706377-6706520:-1:exon
so has part: feature:6686845-6687060:-1:exon

XP_017897353.1
type: Protein
SIO_000068: ncbiprotein

position:6975676:-1
position: 6975676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6975624-6975676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6918846-6919040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6918608-6918688:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6916848-6916960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6913998-6914056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6896841-6896930:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6808011-6808054:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6782549-6782742:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6747453-6747523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6722857-6723014:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6720239-6720383:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6706377-6706520:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6686845-6687060:-1:exon

PSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH and SEC7 domain-containing protein 3 isoform X6
translation: MASWCLSYCCNAGVKTALLEAHSEMGSTEILEKEASGGLSNCTSSNIEAAKRLAKRLYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERERVLVHFSNRYFYCNPDTIASQDGVHCLTCAMMLLNTDLHGHNIGKKMTCQEFIANLQGVDEGGDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSVSEGADEKANGTHPKSISRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKALSEEDLKNAVSVHHALASQATDYEKKPNVLKLKTADWRVLLFQAQSLEEMQGWISKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLRQITTELAEHRSYPPDKKVKAKEVDEYKLKDHYLEFEKTRYEMYVRLLKEGGLELLSGGRGGPAGLKKSHSSPSLNPDTSPVTAKVKRNVSERKEHRPETPSIKQKVT
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: complement(join(6686845..6687060,6706377..6706520,6720239..6720383,6722857..6723014,6747453..6747523,6782549..6782742,6808011..6808054,6896841..6896930,6913998..6914056,6916848..6916960,6918608..6918688,6918846..6919040,6922760..6922788))
location: region:6686845-6922788:-1
so has part: feature:6922760-6922788:-1:exon
so has part: feature:6918846-6919040:-1:exon
so has part: feature:6918608-6918688:-1:exon
so has part: feature:6916848-6916960:-1:exon
so has part: feature:6913998-6914056:-1:exon
so has part: feature:6896841-6896930:-1:exon
so has part: feature:6808011-6808054:-1:exon
so has part: feature:6782549-6782742:-1:exon
so has part: feature:6747453-6747523:-1:exon
so has part: feature:6722857-6723014:-1:exon
so has part: feature:6720239-6720383:-1:exon
so has part: feature:6706377-6706520:-1:exon
so has part: feature:6686845-6687060:-1:exon

XP_017897354.1
type: Protein
SIO_000068: ncbiprotein

position:6922788:-1
position: 6922788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6922760-6922788:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6918846-6919040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6918608-6918688:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6916848-6916960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6913998-6914056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6896841-6896930:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6808011-6808054:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6782549-6782742:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6747453-6747523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6722857-6723014:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6720239-6720383:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6706377-6706520:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6686845-6687060:-1:exon

LOC108634082
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634082
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6947223..6974389)
location: region:6947223-6974389:-1
so has part: feature:6947223-6974389:-1:exon
subclass of: SO_0000011

108634082
type: Gene
SIO_000068: ncbigene

position:6947223:-1
position: 6947223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6974389:-1
position: 6974389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6947223-6974389:-1:exon

LOC108634082
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108634082
product: uncharacterized LOC108634082
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001917361.1
SIO_010081: LOC108634082
subclass of: SO_0000673
so part of: LOC108634082
location: complement(join(6947223..6947267,6974077..6974389))
location: region:6947223-6974389:-1
so has part: feature:6974077-6974389:-1:exon
so has part: feature:6947223-6947267:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6974077-6974389:-1:exon

position:6974077:-1
position: 6974077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6947223-6947267:-1:exon

position:6947267:-1
position: 6947267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 7271416..7271487
location: region:7271416-7271487:1
so has part: feature:7271416-7271487:1:exon
subclass of: SO_0000663

108634123
type: Gene
SIO_000068: ncbigene

position:7271416:1
position: 7271416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7271487:1
position: 7271487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7271416-7271487:1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:7271449..7271451,aa:Gly,seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: 7271416..7271487
location: region:7271416-7271487:1
so has part: feature:7271416-7271487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7271416-7271487:1:exon

SH2D4A
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SH2D4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7322920..7378131
location: region:7322920-7378131:1
so has part: feature:7322920-7378131:1:exon
subclass of: SO_0000010

102179631
type: Gene
SIO_000068: ncbigene

position:7322920:1
position: 7322920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7378131:1
position: 7378131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7322920-7378131:1:exon

SH2D4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SH2D4A
product: SH2 domain containing 4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_018042054.1
SIO_010081: SH2D4A
subclass of: SO_0000673
so part of: SH2D4A
location: join(7322920..7323291,7328820..7329195,7339584..7339743,7340858..7341029,7366047..7366158,7367661..7367862,7370600..7370730,7375807..7376027,7376893..7378131)
location: region:7322920-7378131:1
so has part: feature:7322920-7323291:1:exon
so has part: feature:7328820-7329195:1:exon
so has part: feature:7339584-7339743:1:exon
so has part: feature:7340858-7341029:1:exon
so has part: feature:7366047-7366158:1:exon
so has part: feature:7367661-7367862:1:exon
so has part: feature:7370600-7370730:1:exon
so has part: feature:7375807-7376027:1:exon
so has part: feature:7376893-7378131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7322920-7323291:1:exon

position:7323291:1
position: 7323291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7328820-7329195:1:exon

position:7328820:1
position: 7328820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7329195:1
position: 7329195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7339584-7339743:1:exon

position:7339584:1
position: 7339584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7339743:1
position: 7339743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7340858-7341029:1:exon

position:7340858:1
position: 7340858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7341029:1
position: 7341029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7366047-7366158:1:exon

position:7366047:1
position: 7366047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7366158:1
position: 7366158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7367661-7367862:1:exon

position:7367661:1
position: 7367661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7367862:1
position: 7367862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7370600-7370730:1:exon

position:7370600:1
position: 7370600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7370730:1
position: 7370730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7375807-7376027:1:exon

position:7375807:1
position: 7375807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7376027:1
position: 7376027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7376893-7378131:1:exon

position:7376893:1
position: 7376893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SH2D4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SH2D4A
product: SH2 domain containing 4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_018042053.1
SIO_010081: SH2D4A
subclass of: SO_0000673
so part of: SH2D4A
location: join(7322921..7323291,7328820..7329195,7339584..7339743,7340858..7341029,7358174..7358254,7366047..7366158,7367661..7367862,7370600..7370730,7375807..7376027,7376893..7378131)
location: region:7322921-7378131:1
so has part: feature:7322921-7323291:1:exon
so has part: feature:7328820-7329195:1:exon
so has part: feature:7339584-7339743:1:exon
so has part: feature:7340858-7341029:1:exon
so has part: feature:7358174-7358254:1:exon
so has part: feature:7366047-7366158:1:exon
so has part: feature:7367661-7367862:1:exon
so has part: feature:7370600-7370730:1:exon
so has part: feature:7375807-7376027:1:exon
so has part: feature:7376893-7378131:1:exon

position:7322921:1
position: 7322921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7322921-7323291:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7328820-7329195:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7339584-7339743:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7340858-7341029:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7358174-7358254:1:exon

position:7358174:1
position: 7358174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7358254:1
position: 7358254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7366047-7366158:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7367661-7367862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7370600-7370730:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7375807-7376027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7376893-7378131:1:exon

SH2D4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SH2D4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 4A isoform X1
translation: MLKQILSEMYIDPDLLAELNEEQKQILFFKMREEQVRRWKEREAAMEKQESLPVKPRPKTDNSKSVHWKLGADNEVWVWVMGEHHLDKPYDVICDEILAERARLKAEQETPELRKAQPGELSSSSKSKLPSSEGRAPSAGETGNVGEKAAEVGTPGRGCRPAAPLGEQKAPLSSSSSRNIHQMLADSVSRIKEFGFHQKKVSVKQTQDEEIKQTDEERTKEIYTNWKEDSEWQASLRKSKAADEKRRSLAKQAREDYKRLSQRGRSGKGPQGPPGGPPKPKRPPLPPKPHFLSPAGQPHTPLRNQKVTRPASSPAQEDIRRWFREEQLPLRAGYLADSDSIAPWFHGILTVNRANELLSTCVPGSFLIRVNEKVKGYALSYQSEDGCKHFLIDASLDSYSFLGVDQLQHASLAELVEYHKEEPITSLGKELLLYPCGQQQEPPDYLELFE
SIO_010081: SH2D4A
subclass of: SO_0000673
so part of: SH2D4A
location: join(7329015..7329195,7339584..7339743,7340858..7341029,7358174..7358254,7366047..7366158,7367661..7367862,7370600..7370730,7375807..7376027,7376893..7376985)
location: region:7329015-7376985:1
so has part: feature:7329015-7329195:1:exon
so has part: feature:7339584-7339743:1:exon
so has part: feature:7340858-7341029:1:exon
so has part: feature:7358174-7358254:1:exon
so has part: feature:7366047-7366158:1:exon
so has part: feature:7367661-7367862:1:exon
so has part: feature:7370600-7370730:1:exon
so has part: feature:7375807-7376027:1:exon
so has part: feature:7376893-7376985:1:exon

XP_017897542.1
type: Protein
SIO_000068: ncbiprotein

position:7329015:1
position: 7329015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7376985:1
position: 7376985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7329015-7329195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7339584-7339743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7340858-7341029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7358174-7358254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7366047-7366158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7367661-7367862:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7370600-7370730:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7375807-7376027:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7376893-7376985:1:exon

SH2D4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SH2D4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 4A isoform X2
translation: MLKQILSEMYIDPDLLAELNEEQKQILFFKMREEQVRRWKEREAAMEKQESLPVKPRPKTDNSKSVHWKLGADNEVWVWVMGEHHLDKPYDVICDEILAERARLKAEQETPELRKAQPGELSSSSKSKLPSSEGRAPSAGETGNVGEKAAEVGTPGRGCRPAAPLGEQKAPKKVSVKQTQDEEIKQTDEERTKEIYTNWKEDSEWQASLRKSKAADEKRRSLAKQAREDYKRLSQRGRSGKGPQGPPGGPPKPKRPPLPPKPHFLSPAGQPHTPLRNQKVTRPASSPAQEDIRRWFREEQLPLRAGYLADSDSIAPWFHGILTVNRANELLSTCVPGSFLIRVNEKVKGYALSYQSEDGCKHFLIDASLDSYSFLGVDQLQHASLAELVEYHKEEPITSLGKELLLYPCGQQQEPPDYLELFE
SIO_010081: SH2D4A
subclass of: SO_0000673
so part of: SH2D4A
location: join(7329015..7329195,7339584..7339743,7340858..7341029,7366047..7366158,7367661..7367862,7370600..7370730,7375807..7376027,7376893..7376985)
location: region:7329015-7376985:1
so has part: feature:7329015-7329195:1:exon
so has part: feature:7339584-7339743:1:exon
so has part: feature:7340858-7341029:1:exon
so has part: feature:7366047-7366158:1:exon
so has part: feature:7367661-7367862:1:exon
so has part: feature:7370600-7370730:1:exon
so has part: feature:7375807-7376027:1:exon
so has part: feature:7376893-7376985:1:exon

XP_017897543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7329015-7329195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7339584-7339743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7340858-7341029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7366047-7366158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7367661-7367862:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7370600-7370730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7375807-7376027:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7376893-7376985:1:exon

CSGALNACT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7387772..7720449)
location: region:7387772-7720449:-1
so has part: feature:7387772-7720449:-1:exon
subclass of: SO_0000010

102179349
type: Gene
SIO_000068: ncbigene

position:7387772:-1
position: 7387772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7720449:-1
position: 7720449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7387772-7720449:-1:exon

CSGALNACT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CSGALNACT1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018042046.1
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: complement(join(7387772..7389396,7391453..7391534,7398674..7398768,7399606..7399784,7415085..7415186,7428091..7428307,7473020..7473886,7560187..7560280,7720294..7720449))
location: region:7387772-7720449:-1
so has part: feature:7720294-7720449:-1:exon
so has part: feature:7560187-7560280:-1:exon
so has part: feature:7473020-7473886:-1:exon
so has part: feature:7428091-7428307:-1:exon
so has part: feature:7415085-7415186:-1:exon
so has part: feature:7399606-7399784:-1:exon
so has part: feature:7398674-7398768:-1:exon
so has part: feature:7391453-7391534:-1:exon
so has part: feature:7387772-7389396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7720294-7720449:-1:exon

position:7720294:-1
position: 7720294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7560187-7560280:-1:exon

position:7560187:-1
position: 7560187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7560280:-1
position: 7560280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7473020-7473886:-1:exon

position:7473020:-1
position: 7473020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7473886:-1
position: 7473886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7428091-7428307:-1:exon

position:7428091:-1
position: 7428091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7428307:-1
position: 7428307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7415085-7415186:-1:exon

position:7415085:-1
position: 7415085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7415186:-1
position: 7415186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7399606-7399784:-1:exon

position:7399606:-1
position: 7399606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7399784:-1
position: 7399784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7398674-7398768:-1:exon

position:7398674:-1
position: 7398674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7398768:-1
position: 7398768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7391453-7391534:-1:exon

position:7391453:-1
position: 7391453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7391534:-1
position: 7391534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7387772-7389396:-1:exon

position:7389396:-1
position: 7389396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSGALNACT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CSGALNACT1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018042047.1
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: complement(join(7387772..7389396,7391453..7391534,7398674..7398768,7399606..7399784,7415085..7415186,7428091..7428307,7473020..7473886,7560187..7560280,7719849..7719871))
location: region:7387772-7719871:-1
so has part: feature:7719849-7719871:-1:exon
so has part: feature:7560187-7560280:-1:exon
so has part: feature:7473020-7473886:-1:exon
so has part: feature:7428091-7428307:-1:exon
so has part: feature:7415085-7415186:-1:exon
so has part: feature:7399606-7399784:-1:exon
so has part: feature:7398674-7398768:-1:exon
so has part: feature:7391453-7391534:-1:exon
so has part: feature:7387772-7389396:-1:exon

position:7719871:-1
position: 7719871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7719849-7719871:-1:exon

position:7719849:-1
position: 7719849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7560187-7560280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7473020-7473886:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7428091-7428307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7415085-7415186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7399606-7399784:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7398674-7398768:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7391453-7391534:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7387772-7389396:-1:exon

CSGALNACT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CSGALNACT1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018042045.1
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: complement(join(7387772..7389396,7391453..7391534,7398674..7398768,7399606..7399784,7415085..7415186,7428091..7428307,7473020..7473886,7560187..7560280,7560573..7560692,7560973..7561101))
location: region:7387772-7561101:-1
so has part: feature:7560973-7561101:-1:exon
so has part: feature:7560573-7560692:-1:exon
so has part: feature:7560187-7560280:-1:exon
so has part: feature:7473020-7473886:-1:exon
so has part: feature:7428091-7428307:-1:exon
so has part: feature:7415085-7415186:-1:exon
so has part: feature:7399606-7399784:-1:exon
so has part: feature:7398674-7398768:-1:exon
so has part: feature:7391453-7391534:-1:exon
so has part: feature:7387772-7389396:-1:exon

position:7561101:-1
position: 7561101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7560973-7561101:-1:exon

position:7560973:-1
position: 7560973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7560573-7560692:-1:exon

position:7560573:-1
position: 7560573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7560692:-1
position: 7560692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7560187-7560280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7473020-7473886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7428091-7428307:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7415085-7415186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7399606-7399784:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7398674-7398768:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7391453-7391534:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7387772-7389396:-1:exon

CSGALNACT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1
translation: MLRRGLLAWASRVVVLLVLLCCAASVLYMLACTPRGDDERLGLPRANGPTGRAGSQAAVLSWEERHRDHVGSLKRQIAQLQDELQERSEQLRAAQQLAGEPAGAPGRAQADLLAFLRSQVDRAEVHAGVKQATEYAAVPFDSFTLHKVYQLETGLTRHPEEKPVRKDKRDELVEAIQSAVEALNSPAESSPDQRPYTASDFIEGIYRTERDKGTLYELTFRGDHKHEFRRLVLFRPFGPIMKVKKEQLNMASTLVNVIVPLARRVDKFRQFMQNFREMSIQQDGRVHLTVVYFGKEEMDEVKGILENTSRAANFRNFTFIQLSGEFSRGKGLDVGARSWKGSNVLLFFCDVDIYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPSLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIRGWGGEDVHLYRKYLHSNLVVVRAPARGLFHLWHEKRCEDELAPEQYRMCIQSKAMNEASHGQLGMLVFRHEIEAHLRRQRRKTGSRKS
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: complement(join(7389107..7389396,7391453..7391534,7398674..7398768,7399606..7399784,7415085..7415186,7428091..7428307,7473020..7473629))
location: region:7389107-7473629:-1
so has part: feature:7473020-7473629:-1:exon
so has part: feature:7428091-7428307:-1:exon
so has part: feature:7415085-7415186:-1:exon
so has part: feature:7399606-7399784:-1:exon
so has part: feature:7398674-7398768:-1:exon
so has part: feature:7391453-7391534:-1:exon
so has part: feature:7389107-7389396:-1:exon

XP_017897534.1
type: Protein
SIO_000068: ncbiprotein

position:7389107:-1
position: 7389107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7473629:-1
position: 7473629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7473020-7473629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7428091-7428307:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7415085-7415186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7399606-7399784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7398674-7398768:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7391453-7391534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7389107-7389396:-1:exon

CSGALNACT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1
translation: MLRRGLLAWASRVVVLLVLLCCAASVLYMLACTPRGDDERLGLPRANGPTGRAGSQAAVLSWEERHRDHVGSLKRQIAQLQDELQERSEQLRAAQQLAGEPAGAPGRAQADLLAFLRSQVDRAEVHAGVKQATEYAAVPFDSFTLHKVYQLETGLTRHPEEKPVRKDKRDELVEAIQSAVEALNSPAESSPDQRPYTASDFIEGIYRTERDKGTLYELTFRGDHKHEFRRLVLFRPFGPIMKVKKEQLNMASTLVNVIVPLARRVDKFRQFMQNFREMSIQQDGRVHLTVVYFGKEEMDEVKGILENTSRAANFRNFTFIQLSGEFSRGKGLDVGARSWKGSNVLLFFCDVDIYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPSLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIRGWGGEDVHLYRKYLHSNLVVVRAPARGLFHLWHEKRCEDELAPEQYRMCIQSKAMNEASHGQLGMLVFRHEIEAHLRRQRRKTGSRKS
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: complement(join(7389107..7389396,7391453..7391534,7398674..7398768,7399606..7399784,7415085..7415186,7428091..7428307,7473020..7473629))
location: region:7389107-7473629:-1
so has part: feature:7473020-7473629:-1:exon
so has part: feature:7428091-7428307:-1:exon
so has part: feature:7415085-7415186:-1:exon
so has part: feature:7399606-7399784:-1:exon
so has part: feature:7398674-7398768:-1:exon
so has part: feature:7391453-7391534:-1:exon
so has part: feature:7389107-7389396:-1:exon

XP_017897535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7473020-7473629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7428091-7428307:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7415085-7415186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7399606-7399784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7398674-7398768:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7391453-7391534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7389107-7389396:-1:exon

CSGALNACT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1
translation: MLRRGLLAWASRVVVLLVLLCCAASVLYMLACTPRGDDERLGLPRANGPTGRAGSQAAVLSWEERHRDHVGSLKRQIAQLQDELQERSEQLRAAQQLAGEPAGAPGRAQADLLAFLRSQVDRAEVHAGVKQATEYAAVPFDSFTLHKVYQLETGLTRHPEEKPVRKDKRDELVEAIQSAVEALNSPAESSPDQRPYTASDFIEGIYRTERDKGTLYELTFRGDHKHEFRRLVLFRPFGPIMKVKKEQLNMASTLVNVIVPLARRVDKFRQFMQNFREMSIQQDGRVHLTVVYFGKEEMDEVKGILENTSRAANFRNFTFIQLSGEFSRGKGLDVGARSWKGSNVLLFFCDVDIYFTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPSLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIRGWGGEDVHLYRKYLHSNLVVVRAPARGLFHLWHEKRCEDELAPEQYRMCIQSKAMNEASHGQLGMLVFRHEIEAHLRRQRRKTGSRKS
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: complement(join(7389107..7389396,7391453..7391534,7398674..7398768,7399606..7399784,7415085..7415186,7428091..7428307,7473020..7473629))
location: region:7389107-7473629:-1
so has part: feature:7473020-7473629:-1:exon
so has part: feature:7428091-7428307:-1:exon
so has part: feature:7415085-7415186:-1:exon
so has part: feature:7399606-7399784:-1:exon
so has part: feature:7398674-7398768:-1:exon
so has part: feature:7391453-7391534:-1:exon
so has part: feature:7389107-7389396:-1:exon

XP_017897536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7473020-7473629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7428091-7428307:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7415085-7415186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7399606-7399784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7398674-7398768:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7391453-7391534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7389107-7389396:-1:exon

INTS10
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7777662..7808870
location: region:7777662-7808870:1
so has part: feature:7777662-7808870:1:exon
subclass of: SO_0000010

102168326
type: Gene
SIO_000068: ncbigene

position:7777662:1
position: 7777662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7808870:1
position: 7808870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7777662-7808870:1:exon

INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: INTS10
product: integrator complex subunit 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_018042001.1
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: join(7777662..7777858,7778547..7778614,7781149..7781252,7781999..7782138,7784042..7784123,7784585..7784725,7785297..7785468,7785946..7786115,7786879..7787012,7793184..7793337,7794649..7794731,7795728..7795880,7797214..7797322,7800856..7800935,7802462..7802624,7803718..7803811,7808542..7808870)
location: region:7777662-7808870:1
so has part: feature:7777662-7777858:1:exon
so has part: feature:7778547-7778614:1:exon
so has part: feature:7781149-7781252:1:exon
so has part: feature:7781999-7782138:1:exon
so has part: feature:7784042-7784123:1:exon
so has part: feature:7784585-7784725:1:exon
so has part: feature:7785297-7785468:1:exon
so has part: feature:7785946-7786115:1:exon
so has part: feature:7786879-7787012:1:exon
so has part: feature:7793184-7793337:1:exon
so has part: feature:7794649-7794731:1:exon
so has part: feature:7795728-7795880:1:exon
so has part: feature:7797214-7797322:1:exon
so has part: feature:7800856-7800935:1:exon
so has part: feature:7802462-7802624:1:exon
so has part: feature:7803718-7803811:1:exon
so has part: feature:7808542-7808870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7777662-7777858:1:exon

position:7777858:1
position: 7777858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7778547-7778614:1:exon

position:7778547:1
position: 7778547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7778614:1
position: 7778614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7781149-7781252:1:exon

position:7781149:1
position: 7781149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7781252:1
position: 7781252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7781999-7782138:1:exon

position:7781999:1
position: 7781999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7782138:1
position: 7782138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7784042-7784123:1:exon

position:7784042:1
position: 7784042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7784123:1
position: 7784123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7784585-7784725:1:exon

position:7784585:1
position: 7784585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7784725:1
position: 7784725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7785297-7785468:1:exon

position:7785297:1
position: 7785297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7785468:1
position: 7785468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7785946-7786115:1:exon

position:7785946:1
position: 7785946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7786115:1
position: 7786115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7786879-7787012:1:exon

position:7786879:1
position: 7786879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7787012:1
position: 7787012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7793184-7793337:1:exon

position:7793184:1
position: 7793184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7793337:1
position: 7793337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7794649-7794731:1:exon

position:7794649:1
position: 7794649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7794731:1
position: 7794731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7795728-7795880:1:exon

position:7795728:1
position: 7795728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7795880:1
position: 7795880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7797214-7797322:1:exon

position:7797214:1
position: 7797214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7797322:1
position: 7797322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7800856-7800935:1:exon

position:7800856:1
position: 7800856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7800935:1
position: 7800935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7802462-7802624:1:exon

position:7802462:1
position: 7802462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7802624:1
position: 7802624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7803718-7803811:1:exon

position:7803718:1
position: 7803718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7803811:1
position: 7803811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7808542-7808870:1:exon

position:7808542:1
position: 7808542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: INTS10
product: integrator complex subunit 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_018042000.1
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: join(7777662..7777858,7778547..7778614,7781149..7781252,7781999..7782138,7784042..7784123,7784585..7784725,7785297..7785468,7785946..7786115,7786879..7787012,7793184..7793337,7794649..7794731,7795728..7795880,7797214..7797322,7800856..7800935,7802462..7802624,7803718..7803811,7806457..7806534,7808542..7808865)
location: region:7777662-7808865:1
so has part: feature:7777662-7777858:1:exon
so has part: feature:7778547-7778614:1:exon
so has part: feature:7781149-7781252:1:exon
so has part: feature:7781999-7782138:1:exon
so has part: feature:7784042-7784123:1:exon
so has part: feature:7784585-7784725:1:exon
so has part: feature:7785297-7785468:1:exon
so has part: feature:7785946-7786115:1:exon
so has part: feature:7786879-7787012:1:exon
so has part: feature:7793184-7793337:1:exon
so has part: feature:7794649-7794731:1:exon
so has part: feature:7795728-7795880:1:exon
so has part: feature:7797214-7797322:1:exon
so has part: feature:7800856-7800935:1:exon
so has part: feature:7802462-7802624:1:exon
so has part: feature:7803718-7803811:1:exon
so has part: feature:7806457-7806534:1:exon
so has part: feature:7808542-7808865:1:exon

position:7808865:1
position: 7808865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7777662-7777858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7778547-7778614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7781149-7781252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7781999-7782138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7784042-7784123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7784585-7784725:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7785297-7785468:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7785946-7786115:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7786879-7787012:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7793184-7793337:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7794649-7794731:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7795728-7795880:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7797214-7797322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7800856-7800935:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7802462-7802624:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7803718-7803811:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7806457-7806534:1:exon

position:7806457:1
position: 7806457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7806534:1
position: 7806534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7808542-7808865:1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X1
translation: MSAQGDCEFLVQRARELVPQDLWAAKAWLITARSLYPADFNIQYEMYTIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRIQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRTTQVENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCDWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTLLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEIDRSKHIHKKRKLAEGREKPTSSDDEDCSAKGRNRHIVINKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSLPQPQISGQGTLEHQRALIQLATCHFALGEYRMTCEKVLDLMCSMVLPIQDGGKSQEEPSKIKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQHEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKPSSPPMGLLQQEFFPVLQPSIQTADRHHTVTRGITKGVKEDFRLAMERQVSRCGESLMLVLHRFCVNEKILLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: join(7777730..7777858,7778547..7778614,7781149..7781252,7781999..7782138,7784042..7784123,7784585..7784725,7785297..7785468,7785946..7786115,7786879..7787012,7793184..7793337,7794649..7794731,7795728..7795880,7797214..7797322,7800856..7800935,7802462..7802624,7803718..7803811,7806457..7806534,7808542..7808698)
location: region:7777730-7808698:1
so has part: feature:7777730-7777858:1:exon
so has part: feature:7778547-7778614:1:exon
so has part: feature:7781149-7781252:1:exon
so has part: feature:7781999-7782138:1:exon
so has part: feature:7784042-7784123:1:exon
so has part: feature:7784585-7784725:1:exon
so has part: feature:7785297-7785468:1:exon
so has part: feature:7785946-7786115:1:exon
so has part: feature:7786879-7787012:1:exon
so has part: feature:7793184-7793337:1:exon
so has part: feature:7794649-7794731:1:exon
so has part: feature:7795728-7795880:1:exon
so has part: feature:7797214-7797322:1:exon
so has part: feature:7800856-7800935:1:exon
so has part: feature:7802462-7802624:1:exon
so has part: feature:7803718-7803811:1:exon
so has part: feature:7806457-7806534:1:exon
so has part: feature:7808542-7808698:1:exon

XP_017897489.1
type: Protein
SIO_000068: ncbiprotein

position:7777730:1
position: 7777730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7808698:1
position: 7808698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7777730-7777858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7778547-7778614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7781149-7781252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7781999-7782138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7784042-7784123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7784585-7784725:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7785297-7785468:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7785946-7786115:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7786879-7787012:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7793184-7793337:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7794649-7794731:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7795728-7795880:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7797214-7797322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7800856-7800935:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7802462-7802624:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7803718-7803811:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7806457-7806534:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7808542-7808698:1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X2
translation: MSAQGDCEFLVQRARELVPQDLWAAKAWLITARSLYPADFNIQYEMYTIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRIQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRTTQVENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCDWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTLLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEIDRSKHIHKKRKLAEGREKPTSSDDEDCSAKGRNRHIVINKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSLPQPQISGQGTLEHQRALIQLATCHFALGEYRMTCEKVLDLMCSMVLPIQDGGKSQEEPSKIKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQHEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKHHTVTRGITKGVKEDFRLAMERQVSRCGESLMLVLHRFCVNEKILLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: join(7777730..7777858,7778547..7778614,7781149..7781252,7781999..7782138,7784042..7784123,7784585..7784725,7785297..7785468,7785946..7786115,7786879..7787012,7793184..7793337,7794649..7794731,7795728..7795880,7797214..7797322,7800856..7800935,7802462..7802624,7803718..7803811,7808542..7808698)
location: region:7777730-7808698:1
so has part: feature:7777730-7777858:1:exon
so has part: feature:7778547-7778614:1:exon
so has part: feature:7781149-7781252:1:exon
so has part: feature:7781999-7782138:1:exon
so has part: feature:7784042-7784123:1:exon
so has part: feature:7784585-7784725:1:exon
so has part: feature:7785297-7785468:1:exon
so has part: feature:7785946-7786115:1:exon
so has part: feature:7786879-7787012:1:exon
so has part: feature:7793184-7793337:1:exon
so has part: feature:7794649-7794731:1:exon
so has part: feature:7795728-7795880:1:exon
so has part: feature:7797214-7797322:1:exon
so has part: feature:7800856-7800935:1:exon
so has part: feature:7802462-7802624:1:exon
so has part: feature:7803718-7803811:1:exon
so has part: feature:7808542-7808698:1:exon

XP_017897490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7777730-7777858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7778547-7778614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7781149-7781252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7781999-7782138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7784042-7784123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7784585-7784725:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7785297-7785468:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7785946-7786115:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7786879-7787012:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7793184-7793337:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7794649-7794731:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7795728-7795880:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7797214-7797322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7800856-7800935:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7802462-7802624:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7803718-7803811:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7808542-7808698:1:exon

HGSNAT
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: HGSNAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7815691..7847974)
location: region:7815691-7847974:-1
so has part: feature:7815691-7847974:-1:exon
subclass of: SO_0000010

102179068
type: Gene
SIO_000068: ncbigene

position:7815691:-1
position: 7815691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7847974:-1
position: 7847974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7815691-7847974:-1:exon

HGSNAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: HGSNAT
product: heparan-alpha-glucosaminide N-acetyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 110 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_018041922.1
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: complement(join(7815691..7816774,7817435..7817547,7817646..7817716,7818524..7818601,7820176..7820262,7821323..7821449,7821853..7821974,7823968..7824083,7825017..7825177,7826288..7826318,7826930..7827006,7828947..7829044,7829677..7829746,7833404..7833473,7835935..7836056,7836279..7836415,7840996..7841111,7847847..7847974))
location: region:7815691-7847974:-1
so has part: feature:7847847-7847974:-1:exon
so has part: feature:7840996-7841111:-1:exon
so has part: feature:7836279-7836415:-1:exon
so has part: feature:7835935-7836056:-1:exon
so has part: feature:7833404-7833473:-1:exon
so has part: feature:7829677-7829746:-1:exon
so has part: feature:7828947-7829044:-1:exon
so has part: feature:7826930-7827006:-1:exon
so has part: feature:7826288-7826318:-1:exon
so has part: feature:7825017-7825177:-1:exon
so has part: feature:7823968-7824083:-1:exon
so has part: feature:7821853-7821974:-1:exon
so has part: feature:7821323-7821449:-1:exon
so has part: feature:7820176-7820262:-1:exon
so has part: feature:7818524-7818601:-1:exon
so has part: feature:7817646-7817716:-1:exon
so has part: feature:7817435-7817547:-1:exon
so has part: feature:7815691-7816774:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7847847-7847974:-1:exon

position:7847847:-1
position: 7847847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7840996-7841111:-1:exon

position:7840996:-1
position: 7840996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7841111:-1
position: 7841111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7836279-7836415:-1:exon

position:7836279:-1
position: 7836279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7836415:-1
position: 7836415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7835935-7836056:-1:exon

position:7835935:-1
position: 7835935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7836056:-1
position: 7836056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7833404-7833473:-1:exon

position:7833404:-1
position: 7833404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7833473:-1
position: 7833473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7829677-7829746:-1:exon

position:7829677:-1
position: 7829677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7829746:-1
position: 7829746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7828947-7829044:-1:exon

position:7828947:-1
position: 7828947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7829044:-1
position: 7829044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7826930-7827006:-1:exon

position:7826930:-1
position: 7826930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7827006:-1
position: 7827006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7826288-7826318:-1:exon

position:7826288:-1
position: 7826288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7826318:-1
position: 7826318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7825017-7825177:-1:exon

position:7825017:-1
position: 7825017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7825177:-1
position: 7825177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7823968-7824083:-1:exon

position:7823968:-1
position: 7823968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7824083:-1
position: 7824083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7821853-7821974:-1:exon

position:7821853:-1
position: 7821853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7821974:-1
position: 7821974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7821323-7821449:-1:exon

position:7821323:-1
position: 7821323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7821449:-1
position: 7821449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7820176-7820262:-1:exon

position:7820176:-1
position: 7820176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7820262:-1
position: 7820262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7818524-7818601:-1:exon

position:7818524:-1
position: 7818524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7818601:-1
position: 7818601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7817646-7817716:-1:exon

position:7817646:-1
position: 7817646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7817716:-1
position: 7817716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7817435-7817547:-1:exon

position:7817435:-1
position: 7817435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7817547:-1
position: 7817547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7815691-7816774:-1:exon

position:7816774:-1
position: 7816774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HGSNAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: HGSNAT
product: heparan-alpha-glucosaminide N-acetyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 107 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018041924.1
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: complement(join(7815691..7816774,7817435..7817547,7817646..7817716,7818524..7818601,7820176..7820262,7821323..7821449,7821853..7821974,7823968..7824083,7825017..7825177,7826288..7826318,7826930..7827006,7828947..7829044,7829677..7829746,7833404..7833473,7835935..7836056,7836279..7836415,7840996..7841111,7846497..7847665))
location: region:7815691-7847665:-1
so has part: feature:7846497-7847665:-1:exon
so has part: feature:7840996-7841111:-1:exon
so has part: feature:7836279-7836415:-1:exon
so has part: feature:7835935-7836056:-1:exon
so has part: feature:7833404-7833473:-1:exon
so has part: feature:7829677-7829746:-1:exon
so has part: feature:7828947-7829044:-1:exon
so has part: feature:7826930-7827006:-1:exon
so has part: feature:7826288-7826318:-1:exon
so has part: feature:7825017-7825177:-1:exon
so has part: feature:7823968-7824083:-1:exon
so has part: feature:7821853-7821974:-1:exon
so has part: feature:7821323-7821449:-1:exon
so has part: feature:7820176-7820262:-1:exon
so has part: feature:7818524-7818601:-1:exon
so has part: feature:7817646-7817716:-1:exon
so has part: feature:7817435-7817547:-1:exon
so has part: feature:7815691-7816774:-1:exon

position:7847665:-1
position: 7847665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7846497-7847665:-1:exon

position:7846497:-1
position: 7846497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7840996-7841111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7836279-7836415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7835935-7836056:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7833404-7833473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7829677-7829746:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7828947-7829044:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7826930-7827006:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7826288-7826318:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7825017-7825177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7823968-7824083:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7821853-7821974:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7821323-7821449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7820176-7820262:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7818524-7818601:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7817646-7817716:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7817435-7817547:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7815691-7816774:-1:exon

HGSNAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: HGSNAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparan-alpha-glucosaminide N-acetyltransferase isoform X1
translation: MTGAGSAGRALAALLLAASVLSAALLAPGGSSTPDLDKKKHVELKMDQALLLIHNELPETNLTVYWNFDRCYHCLLQVLATVPQSRKAGRPGVAAVAVGTQHGSILQLNDTAEDKEVCRLEYKFGEFGNYSLLVKHVRDGVSEIACDLVVNKEPVDSNLPVCIAFLVGMVLVIVVSFLRFLLSLEDFQNWISKAINSRETDRLINSELGSPSRASDPQPEAWRRSAAPLRLRCVDTFRGMALILMVFVNYGGGKYWYFKHSSWNGLTVADLVFPWFVFIMGASIFLSMTSILQRGCSKFRLLGKIVWRSLLLICIGIFVVNPNYCLGPLSWEKARIPGVLQRLGATYFVVAVLELLFAKPVPETCASERSCFSLLDITASWPQWLFVLILEGVWLALTFFLPVPGCPTGYLGPGGIGDGGRYRNCTGGAAGYVDRLLLGDQHLYQHPSSAVLYHTEVAYDPEGILGTINSIVMAFLGVQAGKILLYYKDQTRGILIRFAAWGCLLGLVSVALTKASENEGFIPVNKNLWSVSYVTTLSSLAFLILLALYPVVDVKGLWTGAPFFYPGMNSILVYVGHEVFANYFPFQWKLGDQQSHKEHLVQNTVATALWVLIAYVLYKKKVFWKI
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: complement(join(7816593..7816774,7817435..7817547,7817646..7817716,7818524..7818601,7820176..7820262,7821323..7821449,7821853..7821974,7823968..7824083,7825017..7825177,7826288..7826318,7826930..7827006,7828947..7829044,7829677..7829746,7833404..7833473,7835935..7836056,7836279..7836415,7840996..7841111,7847847..7847949))
location: region:7816593-7847949:-1
so has part: feature:7847847-7847949:-1:exon
so has part: feature:7840996-7841111:-1:exon
so has part: feature:7836279-7836415:-1:exon
so has part: feature:7835935-7836056:-1:exon
so has part: feature:7833404-7833473:-1:exon
so has part: feature:7829677-7829746:-1:exon
so has part: feature:7828947-7829044:-1:exon
so has part: feature:7826930-7827006:-1:exon
so has part: feature:7826288-7826318:-1:exon
so has part: feature:7825017-7825177:-1:exon
so has part: feature:7823968-7824083:-1:exon
so has part: feature:7821853-7821974:-1:exon
so has part: feature:7821323-7821449:-1:exon
so has part: feature:7820176-7820262:-1:exon
so has part: feature:7818524-7818601:-1:exon
so has part: feature:7817646-7817716:-1:exon
so has part: feature:7817435-7817547:-1:exon
so has part: feature:7816593-7816774:-1:exon

XP_017897411.1
type: Protein
SIO_000068: ncbiprotein

position:7816593:-1
position: 7816593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7847949:-1
position: 7847949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7847847-7847949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7840996-7841111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7836279-7836415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7835935-7836056:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7833404-7833473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7829677-7829746:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7828947-7829044:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7826930-7827006:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7826288-7826318:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7825017-7825177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7823968-7824083:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7821853-7821974:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7821323-7821449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7820176-7820262:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7818524-7818601:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7817646-7817716:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7817435-7817547:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7816593-7816774:-1:exon

HGSNAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: HGSNAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparan-alpha-glucosaminide N-acetyltransferase isoform X2
translation: MDQALLLIHNELPETNLTVYWNFDRCYHCLLQVLATVPQSRKAGRPGVAAVAVGTQHGSILQLNDTAEDKEVCRLEYKFGEFGNYSLLVKHVRDGVSEIACDLVVNKEPVDSNLPVCIAFLVGMVLVIVVSFLRFLLSLEDFQNWISKAINSRETDRLINSELGSPSRASDPQPEAWRRSAAPLRLRCVDTFRGMALILMVFVNYGGGKYWYFKHSSWNGLTVADLVFPWFVFIMGASIFLSMTSILQRGCSKFRLLGKIVWRSLLLICIGIFVVNPNYCLGPLSWEKARIPGVLQRLGATYFVVAVLELLFAKPVPETCASERSCFSLLDITASWPQWLFVLILEGVWLALTFFLPVPGCPTGYLGPGGIGDGGRYRNCTGGAAGYVDRLLLGDQHLYQHPSSAVLYHTEVAYDPEGILGTINSIVMAFLGVQAGKILLYYKDQTRGILIRFAAWGCLLGLVSVALTKASENEGFIPVNKNLWSVSYVTTLSSLAFLILLALYPVVDVKGLWTGAPFFYPGMNSILVYVGHEVFANYFPFQWKLGDQQSHKEHLVQNTVATALWVLIAYVLYKKKVFWKI
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: complement(join(7816593..7816774,7817435..7817547,7817646..7817716,7818524..7818601,7820176..7820262,7821323..7821449,7821853..7821974,7823968..7824083,7825017..7825177,7826288..7826318,7826930..7827006,7828947..7829044,7829677..7829746,7833404..7833473,7835935..7836056,7836279..7836415,7840996..7841079))
location: region:7816593-7841079:-1
so has part: feature:7840996-7841079:-1:exon
so has part: feature:7836279-7836415:-1:exon
so has part: feature:7835935-7836056:-1:exon
so has part: feature:7833404-7833473:-1:exon
so has part: feature:7829677-7829746:-1:exon
so has part: feature:7828947-7829044:-1:exon
so has part: feature:7826930-7827006:-1:exon
so has part: feature:7826288-7826318:-1:exon
so has part: feature:7825017-7825177:-1:exon
so has part: feature:7823968-7824083:-1:exon
so has part: feature:7821853-7821974:-1:exon
so has part: feature:7821323-7821449:-1:exon
so has part: feature:7820176-7820262:-1:exon
so has part: feature:7818524-7818601:-1:exon
so has part: feature:7817646-7817716:-1:exon
so has part: feature:7817435-7817547:-1:exon
so has part: feature:7816593-7816774:-1:exon

XP_017897413.1
type: Protein
SIO_000068: ncbiprotein

position:7841079:-1
position: 7841079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7840996-7841079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7836279-7836415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7835935-7836056:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7833404-7833473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7829677-7829746:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7828947-7829044:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7826930-7827006:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7826288-7826318:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7825017-7825177:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7823968-7824083:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7821853-7821974:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7821323-7821449:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7820176-7820262:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7818524-7818601:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7817646-7817716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7817435-7817547:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7816593-7816774:-1:exon

POMK
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: POMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7855421..7871861)
location: region:7855421-7871861:-1
so has part: feature:7855421-7871861:-1:exon
subclass of: SO_0000010

102191304
type: Gene
SIO_000068: ncbigene

position:7855421:-1
position: 7855421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7871861:-1
position: 7871861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7855421-7871861:-1:exon

POMK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: POMK
product: protein-O-mannose kinase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_018041927.1
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: complement(join(7855421..7857977,7865280..7865776,7866330..7866430,7871730..7871861))
location: region:7855421-7871861:-1
so has part: feature:7871730-7871861:-1:exon
so has part: feature:7866330-7866430:-1:exon
so has part: feature:7865280-7865776:-1:exon
so has part: feature:7855421-7857977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7871730-7871861:-1:exon

position:7871730:-1
position: 7871730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7866330-7866430:-1:exon

position:7866330:-1
position: 7866330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7866430:-1
position: 7866430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7865280-7865776:-1:exon

position:7865280:-1
position: 7865280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7865776:-1
position: 7865776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7855421-7857977:-1:exon

position:7857977:-1
position: 7857977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POMK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: POMK
product: protein-O-mannose kinase, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041931.1
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: complement(join(7855421..7857977,7865280..7865776,7866330..7866450,7871730..7871861))
location: region:7855421-7871861:-1
so has part: feature:7871730-7871861:-1:exon
so has part: feature:7866330-7866450:-1:exon
so has part: feature:7865280-7865776:-1:exon
so has part: feature:7855421-7857977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7871730-7871861:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7866330-7866450:-1:exon

position:7866450:-1
position: 7866450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7865280-7865776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7855421-7857977:-1:exon

POMK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: POMK
product: protein-O-mannose kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018041926.1
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: complement(join(7855421..7857977,7865280..7865776,7866330..7866430,7867841..7868049,7871730..7871861))
location: region:7855421-7871861:-1
so has part: feature:7871730-7871861:-1:exon
so has part: feature:7867841-7868049:-1:exon
so has part: feature:7866330-7866430:-1:exon
so has part: feature:7865280-7865776:-1:exon
so has part: feature:7855421-7857977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7871730-7871861:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7867841-7868049:-1:exon

position:7867841:-1
position: 7867841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7868049:-1
position: 7868049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7866330-7866430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7865280-7865776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7855421-7857977:-1:exon

POMK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: POMK
product: protein-O-mannose kinase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_018041930.1
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: complement(join(7855421..7857977,7865280..7865776,7866330..7866430,7870427..7871697))
location: region:7855421-7871697:-1
so has part: feature:7870427-7871697:-1:exon
so has part: feature:7866330-7866430:-1:exon
so has part: feature:7865280-7865776:-1:exon
so has part: feature:7855421-7857977:-1:exon

position:7871697:-1
position: 7871697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7870427-7871697:-1:exon

position:7870427:-1
position: 7870427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7866330-7866430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7865280-7865776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7855421-7857977:-1:exon

POMK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: POMK
product: protein-O-mannose kinase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_018041928.1
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: complement(join(7855421..7857977,7865280..7865776,7866330..7866430,7867841..7868049,7870427..7871697))
location: region:7855421-7871697:-1
so has part: feature:7870427-7871697:-1:exon
so has part: feature:7867841-7868049:-1:exon
so has part: feature:7866330-7866430:-1:exon
so has part: feature:7865280-7865776:-1:exon
so has part: feature:7855421-7857977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7870427-7871697:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7867841-7868049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7866330-7866430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7865280-7865776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7855421-7857977:-1:exon

POMK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: POMK
product: protein-O-mannose kinase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_018041929.1
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: complement(join(7855421..7857977,7865280..7865776,7866330..7866430,7867841..7868049,7868891..7869820))
location: region:7855421-7869820:-1
so has part: feature:7868891-7869820:-1:exon
so has part: feature:7867841-7868049:-1:exon
so has part: feature:7866330-7866430:-1:exon
so has part: feature:7865280-7865776:-1:exon
so has part: feature:7855421-7857977:-1:exon

position:7869820:-1
position: 7869820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7868891-7869820:-1:exon

position:7868891:-1
position: 7868891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7867841-7868049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7866330-7866430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7865280-7865776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7855421-7857977:-1:exon

POMK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: POMK
product: protein-O-mannose kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_018041925.1
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: complement(join(7855421..7857977,7865280..7865776,7866330..7866430,7867841..7869820))
location: region:7855421-7869820:-1
so has part: feature:7867841-7869820:-1:exon
so has part: feature:7866330-7866430:-1:exon
so has part: feature:7865280-7865776:-1:exon
so has part: feature:7855421-7857977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7867841-7869820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7866330-7866430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7865280-7865776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7855421-7857977:-1:exon

POMK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: POMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannose kinase
translation: MSPSEGLAERSAMETRPPEGRKGPAPRELPPAVGLLLSMALMNVLLYLCLDRLVTAPRSPTAHPGRCPPGHFSMGQAATCSPWLSCEQLRAEVRPLKRVGEGAVKTVFLSEWKERKVALSRLTRPEVRDDFLHGLRMLQALQSEHVVTLVGYCEDDDTILTEYHPLGSLGNLEATLNLAKYRSLNTWQHRLQLALGYVAILDFLHRSPLGTLVMCDSSDLPKTLSQYLLTANFSIVLNDLDALPLVNRSSGALVKCGHRELRGDFVAPEQLWPFGEDVPFQDDLMPAYDEKSDIWKIPDVSSFLLGHVEGSDMVRFHLFDIHKACKSQVPAERPTAQAVLDTYQKVLNLLRDTATSQTREML
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: complement(join(7857207..7857977,7865280..7865597))
location: region:7857207-7865597:-1
so has part: feature:7865280-7865597:-1:exon
so has part: feature:7857207-7857977:-1:exon

XP_017897414.1
type: Protein
SIO_000068: ncbiprotein

position:7857207:-1
position: 7857207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7865597:-1
position: 7865597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7865280-7865597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7857207-7857977:-1:exon

POMK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: POMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannose kinase
translation: MSPSEGLAERSAMETRPPEGRKGPAPRELPPAVGLLLSMALMNVLLYLCLDRLVTAPRSPTAHPGRCPPGHFSMGQAATCSPWLSCEQLRAEVRPLKRVGEGAVKTVFLSEWKERKVALSRLTRPEVRDDFLHGLRMLQALQSEHVVTLVGYCEDDDTILTEYHPLGSLGNLEATLNLAKYRSLNTWQHRLQLALGYVAILDFLHRSPLGTLVMCDSSDLPKTLSQYLLTANFSIVLNDLDALPLVNRSSGALVKCGHRELRGDFVAPEQLWPFGEDVPFQDDLMPAYDEKSDIWKIPDVSSFLLGHVEGSDMVRFHLFDIHKACKSQVPAERPTAQAVLDTYQKVLNLLRDTATSQTREML
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: complement(join(7857207..7857977,7865280..7865597))
location: region:7857207-7865597:-1
so has part: feature:7865280-7865597:-1:exon
so has part: feature:7857207-7857977:-1:exon

XP_017897415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7865280-7865597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7857207-7857977:-1:exon

POMK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: POMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannose kinase
translation: MSPSEGLAERSAMETRPPEGRKGPAPRELPPAVGLLLSMALMNVLLYLCLDRLVTAPRSPTAHPGRCPPGHFSMGQAATCSPWLSCEQLRAEVRPLKRVGEGAVKTVFLSEWKERKVALSRLTRPEVRDDFLHGLRMLQALQSEHVVTLVGYCEDDDTILTEYHPLGSLGNLEATLNLAKYRSLNTWQHRLQLALGYVAILDFLHRSPLGTLVMCDSSDLPKTLSQYLLTANFSIVLNDLDALPLVNRSSGALVKCGHRELRGDFVAPEQLWPFGEDVPFQDDLMPAYDEKSDIWKIPDVSSFLLGHVEGSDMVRFHLFDIHKACKSQVPAERPTAQAVLDTYQKVLNLLRDTATSQTREML
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: complement(join(7857207..7857977,7865280..7865597))
location: region:7857207-7865597:-1
so has part: feature:7865280-7865597:-1:exon
so has part: feature:7857207-7857977:-1:exon

XP_017897416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7865280-7865597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7857207-7857977:-1:exon

POMK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: POMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannose kinase
translation: MSPSEGLAERSAMETRPPEGRKGPAPRELPPAVGLLLSMALMNVLLYLCLDRLVTAPRSPTAHPGRCPPGHFSMGQAATCSPWLSCEQLRAEVRPLKRVGEGAVKTVFLSEWKERKVALSRLTRPEVRDDFLHGLRMLQALQSEHVVTLVGYCEDDDTILTEYHPLGSLGNLEATLNLAKYRSLNTWQHRLQLALGYVAILDFLHRSPLGTLVMCDSSDLPKTLSQYLLTANFSIVLNDLDALPLVNRSSGALVKCGHRELRGDFVAPEQLWPFGEDVPFQDDLMPAYDEKSDIWKIPDVSSFLLGHVEGSDMVRFHLFDIHKACKSQVPAERPTAQAVLDTYQKVLNLLRDTATSQTREML
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: complement(join(7857207..7857977,7865280..7865597))
location: region:7857207-7865597:-1
so has part: feature:7865280-7865597:-1:exon
so has part: feature:7857207-7857977:-1:exon

XP_017897417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7865280-7865597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7857207-7857977:-1:exon

POMK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: POMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannose kinase
translation: MSPSEGLAERSAMETRPPEGRKGPAPRELPPAVGLLLSMALMNVLLYLCLDRLVTAPRSPTAHPGRCPPGHFSMGQAATCSPWLSCEQLRAEVRPLKRVGEGAVKTVFLSEWKERKVALSRLTRPEVRDDFLHGLRMLQALQSEHVVTLVGYCEDDDTILTEYHPLGSLGNLEATLNLAKYRSLNTWQHRLQLALGYVAILDFLHRSPLGTLVMCDSSDLPKTLSQYLLTANFSIVLNDLDALPLVNRSSGALVKCGHRELRGDFVAPEQLWPFGEDVPFQDDLMPAYDEKSDIWKIPDVSSFLLGHVEGSDMVRFHLFDIHKACKSQVPAERPTAQAVLDTYQKVLNLLRDTATSQTREML
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: complement(join(7857207..7857977,7865280..7865597))
location: region:7857207-7865597:-1
so has part: feature:7865280-7865597:-1:exon
so has part: feature:7857207-7857977:-1:exon

XP_017897418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7865280-7865597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7857207-7857977:-1:exon

POMK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: POMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannose kinase
translation: MSPSEGLAERSAMETRPPEGRKGPAPRELPPAVGLLLSMALMNVLLYLCLDRLVTAPRSPTAHPGRCPPGHFSMGQAATCSPWLSCEQLRAEVRPLKRVGEGAVKTVFLSEWKERKVALSRLTRPEVRDDFLHGLRMLQALQSEHVVTLVGYCEDDDTILTEYHPLGSLGNLEATLNLAKYRSLNTWQHRLQLALGYVAILDFLHRSPLGTLVMCDSSDLPKTLSQYLLTANFSIVLNDLDALPLVNRSSGALVKCGHRELRGDFVAPEQLWPFGEDVPFQDDLMPAYDEKSDIWKIPDVSSFLLGHVEGSDMVRFHLFDIHKACKSQVPAERPTAQAVLDTYQKVLNLLRDTATSQTREML
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: complement(join(7857207..7857977,7865280..7865597))
location: region:7857207-7865597:-1
so has part: feature:7865280-7865597:-1:exon
so has part: feature:7857207-7857977:-1:exon

XP_017897419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7865280-7865597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7857207-7857977:-1:exon

POMK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: POMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein O-mannose kinase
translation: MSPSEGLAERSAMETRPPEGRKGPAPRELPPAVGLLLSMALMNVLLYLCLDRLVTAPRSPTAHPGRCPPGHFSMGQAATCSPWLSCEQLRAEVRPLKRVGEGAVKTVFLSEWKERKVALSRLTRPEVRDDFLHGLRMLQALQSEHVVTLVGYCEDDDTILTEYHPLGSLGNLEATLNLAKYRSLNTWQHRLQLALGYVAILDFLHRSPLGTLVMCDSSDLPKTLSQYLLTANFSIVLNDLDALPLVNRSSGALVKCGHRELRGDFVAPEQLWPFGEDVPFQDDLMPAYDEKSDIWKIPDVSSFLLGHVEGSDMVRFHLFDIHKACKSQVPAERPTAQAVLDTYQKVLNLLRDTATSQTREML
SIO_010081: POMK
subclass of: SO_0000673
so part of: POMK
location: complement(join(7857207..7857977,7865280..7865597))
location: region:7857207-7865597:-1
so has part: feature:7865280-7865597:-1:exon
so has part: feature:7857207-7857977:-1:exon

XP_017897420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7865280-7865597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7857207-7857977:-1:exon

FNTA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: FNTA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7876188..7900271)
location: region:7876188-7900271:-1
so has part: feature:7876188-7900271:-1:exon
subclass of: SO_0000010

102191016
type: Gene
SIO_000068: ncbigene

position:7876188:-1
position: 7876188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7900271:-1
position: 7900271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7876188-7900271:-1:exon

FNTA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FNTA
product: farnesyltransferase, CAAX box, alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 97 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_018042080.1
SIO_010081: FNTA
subclass of: SO_0000673
so part of: FNTA
location: complement(join(7876188..7876819,7877080..7877251,7878306..7878368,7879925..7880073,7882107..7882233,7886596..7886700,7890051..7890165,7897397..7897482,7900037..7900271))
location: region:7876188-7900271:-1
so has part: feature:7900037-7900271:-1:exon
so has part: feature:7897397-7897482:-1:exon
so has part: feature:7890051-7890165:-1:exon
so has part: feature:7886596-7886700:-1:exon
so has part: feature:7882107-7882233:-1:exon
so has part: feature:7879925-7880073:-1:exon
so has part: feature:7878306-7878368:-1:exon
so has part: feature:7877080-7877251:-1:exon
so has part: feature:7876188-7876819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7900037-7900271:-1:exon

position:7900037:-1
position: 7900037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7897397-7897482:-1:exon

position:7897397:-1
position: 7897397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7897482:-1
position: 7897482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7890051-7890165:-1:exon

position:7890051:-1
position: 7890051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7890165:-1
position: 7890165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7886596-7886700:-1:exon

position:7886596:-1
position: 7886596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7886700:-1
position: 7886700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7882107-7882233:-1:exon

position:7882107:-1
position: 7882107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7882233:-1
position: 7882233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7879925-7880073:-1:exon

position:7879925:-1
position: 7879925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7880073:-1
position: 7880073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7878306-7878368:-1:exon

position:7878306:-1
position: 7878306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7878368:-1
position: 7878368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7877080-7877251:-1:exon

position:7877080:-1
position: 7877080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7877251:-1
position: 7877251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7876188-7876819:-1:exon

position:7876819:-1
position: 7876819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FNTA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FNTA
product: farnesyltransferase, CAAX box, alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 68 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_018042081.1
SIO_010081: FNTA
subclass of: SO_0000673
so part of: FNTA
location: complement(join(7876188..7876819,7877080..7877251,7878306..7878368,7879925..7880073,7882107..7882233,7886596..7886700,7890051..7890165,7897397..7897482,7900037..7900106,7900179..7900269))
location: region:7876188-7900269:-1
so has part: feature:7900179-7900269:-1:exon
so has part: feature:7900037-7900106:-1:exon
so has part: feature:7897397-7897482:-1:exon
so has part: feature:7890051-7890165:-1:exon
so has part: feature:7886596-7886700:-1:exon
so has part: feature:7882107-7882233:-1:exon
so has part: feature:7879925-7880073:-1:exon
so has part: feature:7878306-7878368:-1:exon
so has part: feature:7877080-7877251:-1:exon
so has part: feature:7876188-7876819:-1:exon

position:7900269:-1
position: 7900269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7900179-7900269:-1:exon

position:7900179:-1
position: 7900179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7900037-7900106:-1:exon

position:7900106:-1
position: 7900106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7897397-7897482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7890051-7890165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7886596-7886700:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7882107-7882233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7879925-7880073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7878306-7878368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7877080-7877251:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7876188-7876819:-1:exon

FNTA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FNTA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha isoform X2
translation: MAAADGVGEAAQGGEPGQPAAAVSPMDDGFLSLDSPTYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSEKFQDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYISAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILTQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYSDRAILEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDVLNKALELCEILAKEKDTIRKEYWRYIGRSLQSKHSTESDPPTNVQQ
SIO_010081: FNTA
subclass of: SO_0000673
so part of: FNTA
location: complement(join(7876697..7876819,7877080..7877251,7878306..7878368,7879925..7880073,7882107..7882233,7886596..7886700,7890051..7890165,7897397..7897482,7900037..7900106,7900179..7900233))
location: region:7876697-7900233:-1
so has part: feature:7900179-7900233:-1:exon
so has part: feature:7900037-7900106:-1:exon
so has part: feature:7897397-7897482:-1:exon
so has part: feature:7890051-7890165:-1:exon
so has part: feature:7886596-7886700:-1:exon
so has part: feature:7882107-7882233:-1:exon
so has part: feature:7879925-7880073:-1:exon
so has part: feature:7878306-7878368:-1:exon
so has part: feature:7877080-7877251:-1:exon
so has part: feature:7876697-7876819:-1:exon

XP_017897570.1
type: Protein
SIO_000068: ncbiprotein

position:7876697:-1
position: 7876697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7900233:-1
position: 7900233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7900179-7900233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7900037-7900106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7897397-7897482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7890051-7890165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7886596-7886700:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7882107-7882233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7879925-7880073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7878306-7878368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7877080-7877251:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7876697-7876819:-1:exon

FNTA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FNTA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha isoform X1
translation: MAAADGVGEAAQGGEPGQPEPPPPPQPHPPPPPPQAPQEEAAAAAAVSPMDDGFLSLDSPTYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSEKFQDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYISAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILTQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYSDRAILEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDVLNKALELCEILAKEKDTIRKEYWRYIGRSLQSKHSTESDPPTNVQQ
SIO_010081: FNTA
subclass of: SO_0000673
so part of: FNTA
location: complement(join(7876697..7876819,7877080..7877251,7878306..7878368,7879925..7880073,7882107..7882233,7886596..7886700,7890051..7890165,7897397..7897482,7900037..7900233))
location: region:7876697-7900233:-1
so has part: feature:7900037-7900233:-1:exon
so has part: feature:7897397-7897482:-1:exon
so has part: feature:7890051-7890165:-1:exon
so has part: feature:7886596-7886700:-1:exon
so has part: feature:7882107-7882233:-1:exon
so has part: feature:7879925-7880073:-1:exon
so has part: feature:7878306-7878368:-1:exon
so has part: feature:7877080-7877251:-1:exon
so has part: feature:7876697-7876819:-1:exon

XP_017897569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7900037-7900233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7897397-7897482:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7890051-7890165:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7886596-7886700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7882107-7882233:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7879925-7880073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7878306-7878368:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7877080-7877251:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7876697-7876819:-1:exon

HOOK3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7924338..8013326)
location: region:7924338-8013326:-1
so has part: feature:7924338-8013326:-1:exon
subclass of: SO_0000010

100861101
type: Gene
SIO_000068: ncbigene

position:7924338:-1
position: 7924338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8013326:-1
position: 8013326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7924338-8013326:-1:exon

HOOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: HOOK3
product: hook microtubule tethering protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 51 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_018041821.1
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: complement(join(7924338..7927406,7933816..7933952,7937121..7937192,7937912..7938016,7939196..7939296,7940336..7940418,7942614..7942648,7946799..7946886,7951632..7951772,7953719..7953788,7958524..7958611,7959519..7959629,7962455..7962656,7964085..7964225,7967343..7967506,7973107..7973190,7974769..7974831,7982040..7982107,7985520..7985652,7987178..7987228,7990477..7990549,8004646..8004731,8013174..8013326))
location: region:7924338-8013326:-1
so has part: feature:8013174-8013326:-1:exon
so has part: feature:8004646-8004731:-1:exon
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so has part: feature:7987178-7987228:-1:exon
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so has part: feature:7964085-7964225:-1:exon
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so has part: feature:7958524-7958611:-1:exon
so has part: feature:7953719-7953788:-1:exon
so has part: feature:7951632-7951772:-1:exon
so has part: feature:7946799-7946886:-1:exon
so has part: feature:7942614-7942648:-1:exon
so has part: feature:7940336-7940418:-1:exon
so has part: feature:7939196-7939296:-1:exon
so has part: feature:7937912-7938016:-1:exon
so has part: feature:7937121-7937192:-1:exon
so has part: feature:7933816-7933952:-1:exon
so has part: feature:7924338-7927406:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8013174-8013326:-1:exon

position:8013174:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8004646-8004731:-1:exon

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type: ReverseStrandPosition
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position:8004731:-1
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urn:…
SIO_000300: 3
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type: ReverseStrandPosition
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position:7990549:-1
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urn:…
SIO_000300: 4
SIO_000628: feature:7987178-7987228:-1:exon

position:7987178:-1
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reference: sequence
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position:7987228:-1
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:7985520-7985652:-1:exon

position:7985520:-1
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reference: sequence
type: ReverseStrandPosition
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position:7985652:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:7982040-7982107:-1:exon

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position:7982107:-1
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urn:…
SIO_000300: 7
SIO_000628: feature:7974769-7974831:-1:exon

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position:7974831:-1
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urn:…
SIO_000300: 8
SIO_000628: feature:7973107-7973190:-1:exon

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reference: sequence
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:7967343-7967506:-1:exon

position:7967343:-1
position: 7967343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7967506:-1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:7964085-7964225:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:7964225:-1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:7962455-7962656:-1:exon

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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:7959519-7959629:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:7958524-7958611:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:7953719-7953788:-1:exon

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urn:…
SIO_000300: 15
SIO_000628: feature:7951632-7951772:-1:exon

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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:7946799-7946886:-1:exon

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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:7942614-7942648:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:7940336-7940418:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:7940418:-1
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:7939196-7939296:-1:exon

position:7939196:-1
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reference: sequence
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position:7939296:-1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:7937912-7938016:-1:exon

position:7937912:-1
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reference: sequence
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position:7938016:-1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:7937121-7937192:-1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:7933816-7933952:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:7924338-7927406:-1:exon

position:7927406:-1
position: 7927406
reference: sequence
type: ReverseStrandPosition
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HOOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: HOOK3
product: hook microtubule tethering protein 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 87 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_018041824.1
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: complement(join(7924338..7933952,7937121..7937192,7937912..7938016,7939196..7939296,7940336..7940418,7942614..7942648,7946799..7946886,7951632..7951772,7953719..7953788,7958524..7958611,7959519..7959629,7962455..7962656,7964085..7964225,7967343..7967506,7973107..7973190,7974769..7974831,7982040..7982107,7985520..7985652,7987178..7987228,7990477..7990549,8004646..8004731,8013174..8013326))
location: region:7924338-8013326:-1
so has part: feature:8013174-8013326:-1:exon
so has part: feature:8004646-8004731:-1:exon
so has part: feature:7990477-7990549:-1:exon
so has part: feature:7987178-7987228:-1:exon
so has part: feature:7985520-7985652:-1:exon
so has part: feature:7982040-7982107:-1:exon
so has part: feature:7974769-7974831:-1:exon
so has part: feature:7973107-7973190:-1:exon
so has part: feature:7967343-7967506:-1:exon
so has part: feature:7964085-7964225:-1:exon
so has part: feature:7962455-7962656:-1:exon
so has part: feature:7959519-7959629:-1:exon
so has part: feature:7958524-7958611:-1:exon
so has part: feature:7953719-7953788:-1:exon
so has part: feature:7951632-7951772:-1:exon
so has part: feature:7946799-7946886:-1:exon
so has part: feature:7942614-7942648:-1:exon
so has part: feature:7940336-7940418:-1:exon
so has part: feature:7939196-7939296:-1:exon
so has part: feature:7937912-7938016:-1:exon
so has part: feature:7937121-7937192:-1:exon
so has part: feature:7924338-7933952:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8013174-8013326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8004646-8004731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7990477-7990549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7987178-7987228:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7985520-7985652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7982040-7982107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7974769-7974831:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7973107-7973190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7967343-7967506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7964085-7964225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7962455-7962656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7959519-7959629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7958524-7958611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7953719-7953788:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7951632-7951772:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7946799-7946886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7942614-7942648:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7940336-7940418:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7939196-7939296:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7937912-7938016:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7937121-7937192:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7924338-7933952:-1:exon

HOOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: HOOK3
product: hook microtubule tethering protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 52 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_018041820.1
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: complement(join(7924338..7927406,7933816..7933952,7937121..7937192,7937912..7938016,7939196..7939296,7940336..7940418,7942614..7942648,7944593..7944598,7946799..7946886,7951632..7951772,7953719..7953788,7958524..7958611,7959519..7959629,7962455..7962656,7964085..7964225,7967343..7967506,7973107..7973190,7974769..7974831,7982040..7982107,7985520..7985652,7987178..7987228,7990477..7990549,8004646..8004731,8013174..8013326))
location: region:7924338-8013326:-1
so has part: feature:8013174-8013326:-1:exon
so has part: feature:8004646-8004731:-1:exon
so has part: feature:7990477-7990549:-1:exon
so has part: feature:7987178-7987228:-1:exon
so has part: feature:7985520-7985652:-1:exon
so has part: feature:7982040-7982107:-1:exon
so has part: feature:7974769-7974831:-1:exon
so has part: feature:7973107-7973190:-1:exon
so has part: feature:7967343-7967506:-1:exon
so has part: feature:7964085-7964225:-1:exon
so has part: feature:7962455-7962656:-1:exon
so has part: feature:7959519-7959629:-1:exon
so has part: feature:7958524-7958611:-1:exon
so has part: feature:7953719-7953788:-1:exon
so has part: feature:7951632-7951772:-1:exon
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so has part: feature:7940336-7940418:-1:exon
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so has part: feature:7937912-7938016:-1:exon
so has part: feature:7937121-7937192:-1:exon
so has part: feature:7933816-7933952:-1:exon
so has part: feature:7924338-7927406:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8013174-8013326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8004646-8004731:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:7987178-7987228:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7985520-7985652:-1:exon

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SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:7973107-7973190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7967343-7967506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7964085-7964225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7962455-7962656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7959519-7959629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7958524-7958611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7953719-7953788:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7951632-7951772:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7946799-7946886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7944593-7944598:-1:exon

position:7944593:-1
position: 7944593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7944598:-1
position: 7944598
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:7942614-7942648:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7940336-7940418:-1:exon

urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:7937912-7938016:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7937121-7937192:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7933816-7933952:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7924338-7927406:-1:exon

HOOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: HOOK3
product: hook microtubule tethering protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_018041822.1
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: complement(join(7924338..7927406,7933816..7933952,7937121..7937192,7937912..7938016,7939196..7939296,7940336..7940418,7942614..7942648,7944593..7944598,7946799..7946886,7951632..7951772,7953719..7953788,7958524..7958611,7959519..7959629,7962455..7962656,7964085..7964225,7967343..7967506,7973107..7973190,7974769..7974831,7982040..7982107,7985520..7985652,7987178..7987228,7990477..7990549,8004646..8004731,8006669..8006710))
location: region:7924338-8006710:-1
so has part: feature:8006669-8006710:-1:exon
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so has part: feature:7924338-7927406:-1:exon

position:8006710:-1
position: 8006710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8006669-8006710:-1:exon

position:8006669:-1
position: 8006669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8004646-8004731:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 6
SIO_000628: feature:7982040-7982107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7974769-7974831:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7973107-7973190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7967343-7967506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7964085-7964225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7962455-7962656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7959519-7959629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7958524-7958611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7953719-7953788:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7951632-7951772:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7946799-7946886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7944593-7944598:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7942614-7942648:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7940336-7940418:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7939196-7939296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7937912-7938016:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7937121-7937192:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7933816-7933952:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7924338-7927406:-1:exon

HOOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: HOOK3
product: hook microtubule tethering protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_018041823.1
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: complement(join(7924338..7927406,7933816..7933952,7937121..7937192,7937912..7938016,7939196..7939296,7940336..7940418,7942614..7942648,7944593..7944598,7946799..7946886,7951632..7951772,7953719..7953788,7958524..7958611,7959519..7959629,7962455..7962656,7964085..7964225,7967343..7967506,7973107..7973190,7974769..7974831,7982040..7982107,7985520..7985652,7987178..7987228,7990477..7990549,8004646..8004731,8005642..8006077))
location: region:7924338-8006077:-1
so has part: feature:8005642-8006077:-1:exon
so has part: feature:8004646-8004731:-1:exon
so has part: feature:7990477-7990549:-1:exon
so has part: feature:7987178-7987228:-1:exon
so has part: feature:7985520-7985652:-1:exon
so has part: feature:7982040-7982107:-1:exon
so has part: feature:7974769-7974831:-1:exon
so has part: feature:7973107-7973190:-1:exon
so has part: feature:7967343-7967506:-1:exon
so has part: feature:7964085-7964225:-1:exon
so has part: feature:7962455-7962656:-1:exon
so has part: feature:7959519-7959629:-1:exon
so has part: feature:7958524-7958611:-1:exon
so has part: feature:7953719-7953788:-1:exon
so has part: feature:7951632-7951772:-1:exon
so has part: feature:7946799-7946886:-1:exon
so has part: feature:7944593-7944598:-1:exon
so has part: feature:7942614-7942648:-1:exon
so has part: feature:7940336-7940418:-1:exon
so has part: feature:7939196-7939296:-1:exon
so has part: feature:7937912-7938016:-1:exon
so has part: feature:7937121-7937192:-1:exon
so has part: feature:7933816-7933952:-1:exon
so has part: feature:7924338-7927406:-1:exon

position:8006077:-1
position: 8006077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8005642-8006077:-1:exon

position:8005642:-1
position: 8005642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8004646-8004731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7990477-7990549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7987178-7987228:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7985520-7985652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7982040-7982107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7974769-7974831:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7973107-7973190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7967343-7967506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7964085-7964225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7962455-7962656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7959519-7959629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7958524-7958611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7953719-7953788:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7951632-7951772:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7946799-7946886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7944593-7944598:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7942614-7942648:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7940336-7940418:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7939196-7939296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7937912-7938016:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7937121-7937192:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7933816-7933952:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7924338-7927406:-1:exon

HOOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Hook homolog 3 isoform X2
translation: MFNVETLERAELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEVLGQQINDFTLPDVNLIAEHSDAAELGRMLQLILGCAVNCEQKQEYIQAIMVMEESVQHVVMTAIQELMSKESPVSAGNDAYVDLDRQLKKTSEELNEALSAKEEIAQRCHELDLQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADDAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRSERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKINQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDSVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQERDRQFHSLEKEYEKTKSQREMEEKYIVSAWYNMGMTLHKKAAEDRLASTGSGQSFLARQRQATSTRRSYPGHVQPATARLANSPPRSQLLHHCMYSDTGESKPDSRSGDVQESGKRWG
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: complement(join(7927286..7927406,7933816..7933952,7937121..7937192,7937912..7938016,7939196..7939296,7940336..7940418,7942614..7942648,7946799..7946886,7951632..7951772,7953719..7953788,7958524..7958611,7959519..7959629,7962455..7962656,7964085..7964225,7967343..7967506,7973107..7973190,7974769..7974831,7982040..7982107,7985520..7985652,7987178..7987228,7990477..7990549,8004646..8004731,8013174..8013230))
location: region:7927286-8013230:-1
so has part: feature:8013174-8013230:-1:exon
so has part: feature:8004646-8004731:-1:exon
so has part: feature:7990477-7990549:-1:exon
so has part: feature:7987178-7987228:-1:exon
so has part: feature:7985520-7985652:-1:exon
so has part: feature:7982040-7982107:-1:exon
so has part: feature:7974769-7974831:-1:exon
so has part: feature:7973107-7973190:-1:exon
so has part: feature:7967343-7967506:-1:exon
so has part: feature:7964085-7964225:-1:exon
so has part: feature:7962455-7962656:-1:exon
so has part: feature:7959519-7959629:-1:exon
so has part: feature:7958524-7958611:-1:exon
so has part: feature:7953719-7953788:-1:exon
so has part: feature:7951632-7951772:-1:exon
so has part: feature:7946799-7946886:-1:exon
so has part: feature:7942614-7942648:-1:exon
so has part: feature:7940336-7940418:-1:exon
so has part: feature:7939196-7939296:-1:exon
so has part: feature:7937912-7938016:-1:exon
so has part: feature:7937121-7937192:-1:exon
so has part: feature:7933816-7933952:-1:exon
so has part: feature:7927286-7927406:-1:exon

XP_017897310.1
type: Protein
SIO_000068: ncbiprotein

position:7927286:-1
position: 7927286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8013230:-1
position: 8013230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8013174-8013230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8004646-8004731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7990477-7990549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7987178-7987228:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7985520-7985652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7982040-7982107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7974769-7974831:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7973107-7973190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7967343-7967506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7964085-7964225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7962455-7962656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7959519-7959629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7958524-7958611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7953719-7953788:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7951632-7951772:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7946799-7946886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7942614-7942648:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7940336-7940418:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7939196-7939296:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7937912-7938016:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7937121-7937192:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7933816-7933952:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7927286-7927406:-1:exon

HOOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Hook homolog 3 isoform X1
translation: MFNVETLERAELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEVLGQQINDFTLPDVNLIAEHSDAAELGRMLQLILGCAVNCEQKQEYIQAIMVMEESVQHVVMTAIQELMSKESPVSAGNDAYVDLDRQLKKTSEELNEALSAKEEIAQRCHELDLQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADDAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRSERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKINQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDAISVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQERDRQFHSLEKEYEKTKSQREMEEKYIVSAWYNMGMTLHKKAAEDRLASTGSGQSFLARQRQATSTRRSYPGHVQPATARLANSPPRSQLLHHCMYSDTGESKPDSRSGDVQESGKRWG
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: complement(join(7927286..7927406,7933816..7933952,7937121..7937192,7937912..7938016,7939196..7939296,7940336..7940418,7942614..7942648,7944593..7944598,7946799..7946886,7951632..7951772,7953719..7953788,7958524..7958611,7959519..7959629,7962455..7962656,7964085..7964225,7967343..7967506,7973107..7973190,7974769..7974831,7982040..7982107,7985520..7985652,7987178..7987228,7990477..7990549,8004646..8004731,8013174..8013230))
location: region:7927286-8013230:-1
so has part: feature:8013174-8013230:-1:exon
so has part: feature:8004646-8004731:-1:exon
so has part: feature:7990477-7990549:-1:exon
so has part: feature:7987178-7987228:-1:exon
so has part: feature:7985520-7985652:-1:exon
so has part: feature:7982040-7982107:-1:exon
so has part: feature:7974769-7974831:-1:exon
so has part: feature:7973107-7973190:-1:exon
so has part: feature:7967343-7967506:-1:exon
so has part: feature:7964085-7964225:-1:exon
so has part: feature:7962455-7962656:-1:exon
so has part: feature:7959519-7959629:-1:exon
so has part: feature:7958524-7958611:-1:exon
so has part: feature:7953719-7953788:-1:exon
so has part: feature:7951632-7951772:-1:exon
so has part: feature:7946799-7946886:-1:exon
so has part: feature:7944593-7944598:-1:exon
so has part: feature:7942614-7942648:-1:exon
so has part: feature:7940336-7940418:-1:exon
so has part: feature:7939196-7939296:-1:exon
so has part: feature:7937912-7938016:-1:exon
so has part: feature:7937121-7937192:-1:exon
so has part: feature:7933816-7933952:-1:exon
so has part: feature:7927286-7927406:-1:exon

XP_017897309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8013174-8013230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8004646-8004731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7990477-7990549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7987178-7987228:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7985520-7985652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7982040-7982107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7974769-7974831:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7973107-7973190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7967343-7967506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7964085-7964225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7962455-7962656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7959519-7959629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7958524-7958611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7953719-7953788:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7951632-7951772:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7946799-7946886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7944593-7944598:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7942614-7942648:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7940336-7940418:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7939196-7939296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7937912-7938016:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7937121-7937192:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7933816-7933952:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7927286-7927406:-1:exon

HOOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Hook homolog 3 isoform X3
translation: MRWLDSITDSMDIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEVLGQQINDFTLPDVNLIAEHSDAAELGRMLQLILGCAVNCEQKQEYIQAIMVMEESVQHVVMTAIQELMSKESPVSAGNDAYVDLDRQLKKTSEELNEALSAKEEIAQRCHELDLQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADDAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRSERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKINQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDAISVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQERDRQFHSLEKEYEKTKSQREMEEKYIVSAWYNMGMTLHKKAAEDRLASTGSGQSFLARQRQATSTRRSYPGHVQPATARLANSPPRSQLLHHCMYSDTGESKPDSRSGDVQESGKRWG
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: complement(join(7927286..7927406,7933816..7933952,7937121..7937192,7937912..7938016,7939196..7939296,7940336..7940418,7942614..7942648,7944593..7944598,7946799..7946886,7951632..7951772,7953719..7953788,7958524..7958611,7959519..7959629,7962455..7962656,7964085..7964225,7967343..7967506,7973107..7973190,7974769..7974831,7982040..7982107,7985520..7985652,7987178..7987228,7990477..7990549,8004646..8004731,8006669..8006704))
location: region:7927286-8006704:-1
so has part: feature:8006669-8006704:-1:exon
so has part: feature:8004646-8004731:-1:exon
so has part: feature:7990477-7990549:-1:exon
so has part: feature:7987178-7987228:-1:exon
so has part: feature:7985520-7985652:-1:exon
so has part: feature:7982040-7982107:-1:exon
so has part: feature:7974769-7974831:-1:exon
so has part: feature:7973107-7973190:-1:exon
so has part: feature:7967343-7967506:-1:exon
so has part: feature:7964085-7964225:-1:exon
so has part: feature:7962455-7962656:-1:exon
so has part: feature:7959519-7959629:-1:exon
so has part: feature:7958524-7958611:-1:exon
so has part: feature:7953719-7953788:-1:exon
so has part: feature:7951632-7951772:-1:exon
so has part: feature:7946799-7946886:-1:exon
so has part: feature:7944593-7944598:-1:exon
so has part: feature:7942614-7942648:-1:exon
so has part: feature:7940336-7940418:-1:exon
so has part: feature:7939196-7939296:-1:exon
so has part: feature:7937912-7938016:-1:exon
so has part: feature:7937121-7937192:-1:exon
so has part: feature:7933816-7933952:-1:exon
so has part: feature:7927286-7927406:-1:exon

XP_017897311.1
type: Protein
SIO_000068: ncbiprotein

position:8006704:-1
position: 8006704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8006669-8006704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8004646-8004731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7990477-7990549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7987178-7987228:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7985520-7985652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7982040-7982107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7974769-7974831:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7973107-7973190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7967343-7967506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7964085-7964225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7962455-7962656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7959519-7959629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7958524-7958611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7953719-7953788:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7951632-7951772:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7946799-7946886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7944593-7944598:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7942614-7942648:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7940336-7940418:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7939196-7939296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7937912-7938016:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7937121-7937192:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7933816-7933952:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7927286-7927406:-1:exon

HOOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Hook homolog 3 isoform X4
translation: MAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEVLGQQINDFTLPDVNLIAEHSDAAELGRMLQLILGCAVNCEQKQEYIQAIMVMEESVQHVVMTAIQELMSKESPVSAGNDAYVDLDRQLKKTSEELNEALSAKEEIAQRCHELDLQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADDAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRSERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKINQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDAISVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQERDRQFHSLEKEYEKTKSQREMEEKYIVSAWYNMGMTLHKKAAEDRLASTGSGQSFLARQRQATSTRRSYPGHVQPATARLANSPPRSQLLHHCMYSDTGESKPDSRSGDVQESGKRWG
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: complement(join(7927286..7927406,7933816..7933952,7937121..7937192,7937912..7938016,7939196..7939296,7940336..7940418,7942614..7942648,7944593..7944598,7946799..7946886,7951632..7951772,7953719..7953788,7958524..7958611,7959519..7959629,7962455..7962656,7964085..7964225,7967343..7967506,7973107..7973190,7974769..7974831,7982040..7982107,7985520..7985652,7987178..7987228,7990477..7990549,8004646..8004668))
location: region:7927286-8004668:-1
so has part: feature:8004646-8004668:-1:exon
so has part: feature:7990477-7990549:-1:exon
so has part: feature:7987178-7987228:-1:exon
so has part: feature:7985520-7985652:-1:exon
so has part: feature:7982040-7982107:-1:exon
so has part: feature:7974769-7974831:-1:exon
so has part: feature:7973107-7973190:-1:exon
so has part: feature:7967343-7967506:-1:exon
so has part: feature:7964085-7964225:-1:exon
so has part: feature:7962455-7962656:-1:exon
so has part: feature:7959519-7959629:-1:exon
so has part: feature:7958524-7958611:-1:exon
so has part: feature:7953719-7953788:-1:exon
so has part: feature:7951632-7951772:-1:exon
so has part: feature:7946799-7946886:-1:exon
so has part: feature:7944593-7944598:-1:exon
so has part: feature:7942614-7942648:-1:exon
so has part: feature:7940336-7940418:-1:exon
so has part: feature:7939196-7939296:-1:exon
so has part: feature:7937912-7938016:-1:exon
so has part: feature:7937121-7937192:-1:exon
so has part: feature:7933816-7933952:-1:exon
so has part: feature:7927286-7927406:-1:exon

XP_017897312.1
type: Protein
SIO_000068: ncbiprotein

position:8004668:-1
position: 8004668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8004646-8004668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7990477-7990549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7987178-7987228:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7985520-7985652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7982040-7982107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7974769-7974831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7973107-7973190:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7967343-7967506:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7964085-7964225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7962455-7962656:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7959519-7959629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7958524-7958611:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7953719-7953788:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7951632-7951772:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7946799-7946886:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7944593-7944598:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7942614-7942648:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7940336-7940418:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7939196-7939296:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7937912-7938016:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7937121-7937192:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7933816-7933952:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7927286-7927406:-1:exon

HOOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Hook homolog 3 isoform X5
translation: MFNVETLERAELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEVLGQQINDFTLPDVNLIAEHSDAAELGRMLQLILGCAVNCEQKQEYIQAIMVMEESVQHVVMTAIQELMSKESPVSAGNDAYVDLDRQLKKTSEELNEALSAKEEIAQRCHELDLQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADDAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRSERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKINQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDSVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQERDRQFHSLEKEYEKTKSQREMEEKYIVSAWYNMGMTLHKKAAEDRLASTGSGQSFLARQRQATSTRRSYPGHVQPATAR
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: complement(join(7933812..7933952,7937121..7937192,7937912..7938016,7939196..7939296,7940336..7940418,7942614..7942648,7946799..7946886,7951632..7951772,7953719..7953788,7958524..7958611,7959519..7959629,7962455..7962656,7964085..7964225,7967343..7967506,7973107..7973190,7974769..7974831,7982040..7982107,7985520..7985652,7987178..7987228,7990477..7990549,8004646..8004731,8013174..8013230))
location: region:7933812-8013230:-1
so has part: feature:8013174-8013230:-1:exon
so has part: feature:8004646-8004731:-1:exon
so has part: feature:7990477-7990549:-1:exon
so has part: feature:7987178-7987228:-1:exon
so has part: feature:7985520-7985652:-1:exon
so has part: feature:7982040-7982107:-1:exon
so has part: feature:7974769-7974831:-1:exon
so has part: feature:7973107-7973190:-1:exon
so has part: feature:7967343-7967506:-1:exon
so has part: feature:7964085-7964225:-1:exon
so has part: feature:7962455-7962656:-1:exon
so has part: feature:7959519-7959629:-1:exon
so has part: feature:7958524-7958611:-1:exon
so has part: feature:7953719-7953788:-1:exon
so has part: feature:7951632-7951772:-1:exon
so has part: feature:7946799-7946886:-1:exon
so has part: feature:7942614-7942648:-1:exon
so has part: feature:7940336-7940418:-1:exon
so has part: feature:7939196-7939296:-1:exon
so has part: feature:7937912-7938016:-1:exon
so has part: feature:7937121-7937192:-1:exon
so has part: feature:7933812-7933952:-1:exon

XP_017897313.1
type: Protein
SIO_000068: ncbiprotein

position:7933812:-1
position: 7933812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8013174-8013230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8004646-8004731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7990477-7990549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7987178-7987228:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7985520-7985652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7982040-7982107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7974769-7974831:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7973107-7973190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7967343-7967506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7964085-7964225:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7962455-7962656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7959519-7959629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7958524-7958611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7953719-7953788:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7951632-7951772:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7946799-7946886:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7942614-7942648:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7940336-7940418:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7939196-7939296:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7937912-7938016:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7937121-7937192:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7933812-7933952:-1:exon

LOC108634065
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8004788..8005350
location: region:8004788-8005350:1
so has part: feature:8004788-8005350:1:exon

108634065
type: Gene
SIO_000068: ncbigene

position:8004788:1
position: 8004788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8005350:1
position: 8005350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8004788-8005350:1:exon

LOC108634065
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108634065
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC108634065
subclass of: SO_0000673
so part of: LOC108634065
location: 8004788..8005350
location: region:8004788-8005350:1
so has part: feature:8004788-8005350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8004788-8005350:1:exon

RNF170
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8013459..8047823
location: region:8013459-8047823:1
so has part: feature:8013459-8047823:1:exon
subclass of: SO_0000010

102188828
type: Gene
SIO_000068: ncbigene

position:8013459:1
position: 8013459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8047823:1
position: 8047823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8013459-8047823:1:exon

RNF170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RNF170
product: ring finger protein 170, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_018041828.1
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: join(8013459..8013604,8019869..8020012,8030043..8030118,8031771..8031879,8036947..8037020,8041032..8041142,8041668..8042153)
location: region:8013459-8042153:1
so has part: feature:8013459-8013604:1:exon
so has part: feature:8019869-8020012:1:exon
so has part: feature:8030043-8030118:1:exon
so has part: feature:8031771-8031879:1:exon
so has part: feature:8036947-8037020:1:exon
so has part: feature:8041032-8041142:1:exon
so has part: feature:8041668-8042153:1:exon

position:8042153:1
position: 8042153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8013459-8013604:1:exon

position:8013604:1
position: 8013604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8019869-8020012:1:exon

position:8019869:1
position: 8019869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8020012:1
position: 8020012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8030043-8030118:1:exon

position:8030043:1
position: 8030043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8030118:1
position: 8030118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8031771-8031879:1:exon

position:8031771:1
position: 8031771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8031879:1
position: 8031879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8036947-8037020:1:exon

position:8036947:1
position: 8036947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8037020:1
position: 8037020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8041032-8041142:1:exon

position:8041032:1
position: 8041032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8041142:1
position: 8041142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8041668-8042153:1:exon

position:8041668:1
position: 8041668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RNF170
product: ring finger protein 170, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 51 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_018041826.1
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: join(8013460..8013604,8014078..8014180,8019869..8020012,8030043..8030118,8031771..8031879,8036947..8037020,8041032..8041142,8044741..8047823)
location: region:8013460-8047823:1
so has part: feature:8013460-8013604:1:exon
so has part: feature:8014078-8014180:1:exon
so has part: feature:8019869-8020012:1:exon
so has part: feature:8030043-8030118:1:exon
so has part: feature:8031771-8031879:1:exon
so has part: feature:8036947-8037020:1:exon
so has part: feature:8041032-8041142:1:exon
so has part: feature:8044741-8047823:1:exon

position:8013460:1
position: 8013460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8013460-8013604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8014078-8014180:1:exon

position:8014078:1
position: 8014078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8014180:1
position: 8014180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8019869-8020012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8030043-8030118:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8031771-8031879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8036947-8037020:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8041032-8041142:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8044741-8047823:1:exon

position:8044741:1
position: 8044741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RNF170
product: ring finger protein 170, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_018041827.1
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: join(8013460..8013604,8014078..8014149,8019869..8020012,8030043..8030118,8031771..8031879,8036947..8037020,8041032..8041142,8044741..8047823)
location: region:8013460-8047823:1
so has part: feature:8013460-8013604:1:exon
so has part: feature:8014078-8014149:1:exon
so has part: feature:8019869-8020012:1:exon
so has part: feature:8030043-8030118:1:exon
so has part: feature:8031771-8031879:1:exon
so has part: feature:8036947-8037020:1:exon
so has part: feature:8041032-8041142:1:exon
so has part: feature:8044741-8047823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8013460-8013604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8014078-8014149:1:exon

position:8014149:1
position: 8014149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8019869-8020012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8030043-8030118:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8031771-8031879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8036947-8037020:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8041032-8041142:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8044741-8047823:1:exon

RNF170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RNF170
product: ring finger protein 170, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_018041825.1
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: join(8013460..8013604,8019869..8020012,8030043..8030118,8031771..8031879,8036947..8037020,8041032..8041142,8044741..8047823)
location: region:8013460-8047823:1
so has part: feature:8013460-8013604:1:exon
so has part: feature:8019869-8020012:1:exon
so has part: feature:8030043-8030118:1:exon
so has part: feature:8031771-8031879:1:exon
so has part: feature:8036947-8037020:1:exon
so has part: feature:8041032-8041142:1:exon
so has part: feature:8044741-8047823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8013460-8013604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8019869-8020012:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8030043-8030118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8031771-8031879:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8036947-8037020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8041032-8041142:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8044741-8047823:1:exon

RNF170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RNF170
product: ring finger protein 170, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_018041829.1
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: join(8013463..8013604,8019869..8019938,8030043..8030118,8031771..8031879,8036947..8037020,8041032..8041142,8044741..8047823)
location: region:8013463-8047823:1
so has part: feature:8013463-8013604:1:exon
so has part: feature:8019869-8019938:1:exon
so has part: feature:8030043-8030118:1:exon
so has part: feature:8031771-8031879:1:exon
so has part: feature:8036947-8037020:1:exon
so has part: feature:8041032-8041142:1:exon
so has part: feature:8044741-8047823:1:exon

position:8013463:1
position: 8013463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8013463-8013604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8019869-8019938:1:exon

position:8019938:1
position: 8019938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8030043-8030118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8031771-8031879:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8036947-8037020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8041032-8041142:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8044741-8047823:1:exon

RNF170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF170 isoform X1
translation: MARYQGEVQSLKLDDDSVIEGVSDQVLAAVVVSFALVATLVYALFRNAHQNIHPENQELVRVLREQLQTEQDAPAAARQQFYTDMYCPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISCPICRQTVTLLLPVFGENDQSQDVVSLHQDISDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFSVGGLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQRLNR
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: join(8019876..8020012,8030043..8030118,8031771..8031879,8036947..8037020,8041032..8041142,8044741..8045010)
location: region:8019876-8045010:1
so has part: feature:8019876-8020012:1:exon
so has part: feature:8030043-8030118:1:exon
so has part: feature:8031771-8031879:1:exon
so has part: feature:8036947-8037020:1:exon
so has part: feature:8041032-8041142:1:exon
so has part: feature:8044741-8045010:1:exon

XP_017897314.1
type: Protein
SIO_000068: ncbiprotein

position:8019876:1
position: 8019876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8045010:1
position: 8045010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8019876-8020012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8030043-8030118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8031771-8031879:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8036947-8037020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8041032-8041142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8044741-8045010:1:exon

RNF170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF170 isoform X1
translation: MARYQGEVQSLKLDDDSVIEGVSDQVLAAVVVSFALVATLVYALFRNAHQNIHPENQELVRVLREQLQTEQDAPAAARQQFYTDMYCPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISCPICRQTVTLLLPVFGENDQSQDVVSLHQDISDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFSVGGLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQRLNR
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: join(8019876..8020012,8030043..8030118,8031771..8031879,8036947..8037020,8041032..8041142,8044741..8045010)
location: region:8019876-8045010:1
so has part: feature:8019876-8020012:1:exon
so has part: feature:8030043-8030118:1:exon
so has part: feature:8031771-8031879:1:exon
so has part: feature:8036947-8037020:1:exon
so has part: feature:8041032-8041142:1:exon
so has part: feature:8044741-8045010:1:exon

XP_017897315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8019876-8020012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8030043-8030118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8031771-8031879:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8036947-8037020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8041032-8041142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8044741-8045010:1:exon

RNF170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF170 isoform X1
translation: MARYQGEVQSLKLDDDSVIEGVSDQVLAAVVVSFALVATLVYALFRNAHQNIHPENQELVRVLREQLQTEQDAPAAARQQFYTDMYCPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISCPICRQTVTLLLPVFGENDQSQDVVSLHQDISDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFSVGGLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQRLNR
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: join(8019876..8020012,8030043..8030118,8031771..8031879,8036947..8037020,8041032..8041142,8044741..8045010)
location: region:8019876-8045010:1
so has part: feature:8019876-8020012:1:exon
so has part: feature:8030043-8030118:1:exon
so has part: feature:8031771-8031879:1:exon
so has part: feature:8036947-8037020:1:exon
so has part: feature:8041032-8041142:1:exon
so has part: feature:8044741-8045010:1:exon

XP_017897316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8019876-8020012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8030043-8030118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8031771-8031879:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8036947-8037020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8041032-8041142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8044741-8045010:1:exon

RNF170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF170 isoform X2
translation: MARYQGEVQSLKLDDDSVIEGVSDQVLAAVVVSFALVATLVYALFRNAHQNIHPENQELVRVLREQLQTEQDAPAAARQQFYTDMYCPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISCPICRQTVTLLLPVFGENDQSQDVVSLHQDISDYNRRFSGQPRSCSSNATEDSRSACVTEYVLRNPEHSTNPYRTLQAPTSTCSASLPTGCSWPLSHEK
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: join(8019876..8020012,8030043..8030118,8031771..8031879,8036947..8037020,8041032..8041142,8041668..8041835)
location: region:8019876-8041835:1
so has part: feature:8019876-8020012:1:exon
so has part: feature:8030043-8030118:1:exon
so has part: feature:8031771-8031879:1:exon
so has part: feature:8036947-8037020:1:exon
so has part: feature:8041032-8041142:1:exon
so has part: feature:8041668-8041835:1:exon

XP_017897317.1
type: Protein
SIO_000068: ncbiprotein

position:8041835:1
position: 8041835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8019876-8020012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8030043-8030118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8031771-8031879:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8036947-8037020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8041032-8041142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8041668-8041835:1:exon

RNF170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF170 isoform X3
translation: MYCPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISCPICRQTVTLLLPVFGENDQSQDVVSLHQDISDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFSVGGLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQRLNR
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: join(8031810..8031879,8036947..8037020,8041032..8041142,8044741..8045010)
location: region:8031810-8045010:1
so has part: feature:8031810-8031879:1:exon
so has part: feature:8036947-8037020:1:exon
so has part: feature:8041032-8041142:1:exon
so has part: feature:8044741-8045010:1:exon

XP_017897318.1
type: Protein
SIO_000068: ncbiprotein

position:8031810:1
position: 8031810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8031810-8031879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8036947-8037020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8041032-8041142:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8044741-8045010:1:exon

THAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: THAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8052296..8061462
location: region:8052296-8061462:1
so has part: feature:8052296-8061462:1:exon
subclass of: SO_0000010

102188561
type: Gene
SIO_000068: ncbigene

position:8052296:1
position: 8052296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8061462:1
position: 8061462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8052296-8061462:1:exon

THAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: THAP1
product: THAP domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 28 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_005698895.3
SIO_010081: THAP1
subclass of: SO_0000673
so part of: THAP1
location: join(8052296..8052625,8056764..8056959,8057914..8061462)
location: region:8052296-8061462:1
so has part: feature:8052296-8052625:1:exon
so has part: feature:8056764-8056959:1:exon
so has part: feature:8057914-8061462:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8052296-8052625:1:exon

position:8052625:1
position: 8052625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8056764-8056959:1:exon

position:8056764:1
position: 8056764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8056959:1
position: 8056959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8057914-8061462:1:exon

position:8057914:1
position: 8057914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

THAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: THAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THAP domain-containing protein 1
translation: MVQSCSAYGCKNRYDKDKPVSFHKFPLTRPSLCKKWEAAVRRKNFKPTKYSSICSDHFTPDCFKRECNNKLLKEDAVPTIFLCTEPHDKKEDLLEPQEQPPPPPLTPPISQVDAAIGLLMPPLQTPDNLSVFCDHNYTVEDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEKDGASERGYVILPNDYFEIVEVPA
SIO_010081: THAP1
subclass of: SO_0000673
so part of: THAP1
location: join(8052555..8052625,8056764..8056959,8057914..8058288)
location: region:8052555-8058288:1
so has part: feature:8052555-8052625:1:exon
so has part: feature:8056764-8056959:1:exon
so has part: feature:8057914-8058288:1:exon

XP_005698952.1
type: Protein
SIO_000068: ncbiprotein

position:8052555:1
position: 8052555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8058288:1
position: 8058288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8052555-8052625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8056764-8056959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8057914-8058288:1:exon

CHRNA6
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CHRNA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8098537..8103968
location: region:8098537-8103968:1
so has part: feature:8098537-8103968:1:exon
subclass of: SO_0000010

102188285
type: Gene
SIO_000068: ncbigene

position:8098537:1
position: 8098537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8103968:1
position: 8103968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8098537-8103968:1:exon

CHRNA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CHRNA6
product: cholinergic receptor nicotinic alpha 6 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 20 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018041757.1
SIO_010081: CHRNA6
subclass of: SO_0000673
so part of: CHRNA6
location: join(8098537..8098620,8099079..8099123,8100161..8100270,8100371..8101349,8103837..8103968)
location: region:8098537-8103968:1
so has part: feature:8098537-8098620:1:exon
so has part: feature:8099079-8099123:1:exon
so has part: feature:8100161-8100270:1:exon
so has part: feature:8100371-8101349:1:exon
so has part: feature:8103837-8103968:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8098537-8098620:1:exon

position:8098620:1
position: 8098620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8099079-8099123:1:exon

position:8099079:1
position: 8099079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8099123:1
position: 8099123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8100161-8100270:1:exon

position:8100161:1
position: 8100161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8100270:1
position: 8100270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8100371-8101349:1:exon

position:8100371:1
position: 8100371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8101349:1
position: 8101349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8103837-8103968:1:exon

position:8103837:1
position: 8103837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHRNA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CHRNA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit alpha-6
translation: MSEAISSGLGGSERCVVGSGSIQLEGSVDEVNQIMETNLWLRHIWNDYKLRWDPREYDGIETLRVPAEMIWKPDIVLYNNAVGNFQVEGKTKALLKYDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDLLIIGSKVDMNEFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPTTHNMPTWVKAVFLRLLPQILMMKRPLDKMKKAGADRNPKGVSSRPAKVKFEHHKEPRLLKECCHCHRSGGPATSKRRSSHQPLQWTAENSELSPEVEDVIDSVHFIAENMKNQNETKEVEDDWKYVAMVVDRVFLWVFIIVCVFGTAGLFLQPLLGNTGHS
SIO_010081: CHRNA6
subclass of: SO_0000673
so part of: CHRNA6
location: join(8098537..8098620,8099079..8099123,8100161..8100270,8100371..8101349,8103837..8103968)
location: region:8098537-8103968:1
so has part: feature:8098537-8098620:1:exon
so has part: feature:8099079-8099123:1:exon
so has part: feature:8100161-8100270:1:exon
so has part: feature:8100371-8101349:1:exon
so has part: feature:8103837-8103968:1:exon

XP_017897246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8098537-8098620:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8099079-8099123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8100161-8100270:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8100371-8101349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8103837-8103968:1:exon

CHRNB3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CHRNB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8116196..8169943)
location: region:8116196-8169943:-1
so has part: feature:8116196-8169943:-1:exon
subclass of: SO_0000010

102178792
type: Gene
SIO_000068: ncbigene

position:8116196:-1
position: 8116196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8169943:-1
position: 8169943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8116196-8169943:-1:exon

CHRNB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CHRNB3
product: cholinergic receptor nicotinic beta 3 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
transcript id: XM_013975473.2
SIO_010081: CHRNB3
subclass of: SO_0000673
so part of: CHRNB3
location: complement(join(8116196..8116354,8119709..8120591,8120835..8120944,8133608..8133652,8134837..8134988,8169754..8169943))
location: region:8116196-8169943:-1
so has part: feature:8169754-8169943:-1:exon
so has part: feature:8134837-8134988:-1:exon
so has part: feature:8133608-8133652:-1:exon
so has part: feature:8120835-8120944:-1:exon
so has part: feature:8119709-8120591:-1:exon
so has part: feature:8116196-8116354:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8169754-8169943:-1:exon

position:8169754:-1
position: 8169754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8134837-8134988:-1:exon

position:8134837:-1
position: 8134837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8134988:-1
position: 8134988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8133608-8133652:-1:exon

position:8133608:-1
position: 8133608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8133652:-1
position: 8133652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8120835-8120944:-1:exon

position:8120835:-1
position: 8120835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8120944:-1
position: 8120944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8119709-8120591:-1:exon

position:8119709:-1
position: 8119709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8120591:-1
position: 8120591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8116196-8116354:-1:exon

position:8116354:-1
position: 8116354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHRNB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CHRNB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit beta-3
translation: MTESLRTFKQTTGTRAKSPKGTGSPKRDTDWELHMYIWSAELSRPELFRPAALSRQKHQLCTCPAVGFRSIAEEEDALLRHLFQGYQKWVRPVLHSNDTIKVYFGLKISQLVDVDEKNQLMTTNVWLKQEWTDHKLRWNPDEYGGIHSIKVPSESLWLPDIVLFENADGRFEGSLMTKAVVRSDGTVVWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDLVLTDENVDRKDFFDNGEWEILNAKGTAGGRRHGAYWYPFISYSFVLRRLPLFYTLFLIVPCLGLSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMVFVTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQTLPKLLCMKDHVDRYSLPGREERKPALRGQVLEKKKQKQMSDGEKVLVAFLEKAADSIRYISSHVKKEHFISQVVQDWKFAAQVLDRIFLWLFLITSVTGSVLIFTPALKMWLHSYHQEQESRAI
SIO_010081: CHRNB3
subclass of: SO_0000673
so part of: CHRNB3
location: complement(join(8116196..8116354,8119709..8120591,8120835..8120944,8133608..8133652,8134837..8134988,8169754..8169943))
location: region:8116196-8169943:-1
so has part: feature:8169754-8169943:-1:exon
so has part: feature:8134837-8134988:-1:exon
so has part: feature:8133608-8133652:-1:exon
so has part: feature:8120835-8120944:-1:exon
so has part: feature:8119709-8120591:-1:exon
so has part: feature:8116196-8116354:-1:exon

XP_013830927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8169754-8169943:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8134837-8134988:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8133608-8133652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8120835-8120944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8119709-8120591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8116196-8116354:-1:exon

SMIM19
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SMIM19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8236329..8249309)
location: region:8236329-8249309:-1
so has part: feature:8236329-8249309:-1:exon
subclass of: SO_0000010

102187647
type: Gene
SIO_000068: ncbigene

position:8236329:-1
position: 8236329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8249309:-1
position: 8249309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8236329-8249309:-1:exon

SMIM19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SMIM19
product: small integral membrane protein 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 52 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_018041878.1
SIO_010081: SMIM19
subclass of: SO_0000673
so part of: SMIM19
location: complement(join(8236329..8238220,8243284..8243408,8244918..8245055,8249223..8249309))
location: region:8236329-8249309:-1
so has part: feature:8249223-8249309:-1:exon
so has part: feature:8244918-8245055:-1:exon
so has part: feature:8243284-8243408:-1:exon
so has part: feature:8236329-8238220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8249223-8249309:-1:exon

position:8249223:-1
position: 8249223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8244918-8245055:-1:exon

position:8244918:-1
position: 8244918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8245055:-1
position: 8245055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8243284-8243408:-1:exon

position:8243284:-1
position: 8243284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8243408:-1
position: 8243408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8236329-8238220:-1:exon

position:8238220:-1
position: 8238220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMIM19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SMIM19
product: small integral membrane protein 19, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 52 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_018041880.1
SIO_010081: SMIM19
subclass of: SO_0000673
so part of: SMIM19
location: complement(join(8236329..8238220,8243284..8243408,8244918..8245055,8249009..8249141))
location: region:8236329-8249141:-1
so has part: feature:8249009-8249141:-1:exon
so has part: feature:8244918-8245055:-1:exon
so has part: feature:8243284-8243408:-1:exon
so has part: feature:8236329-8238220:-1:exon

position:8249141:-1
position: 8249141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8249009-8249141:-1:exon

position:8249009:-1
position: 8249009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8244918-8245055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8243284-8243408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8236329-8238220:-1:exon

SMIM19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SMIM19
product: small integral membrane protein 19, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_018041879.1
SIO_010081: SMIM19
subclass of: SO_0000673
so part of: SMIM19
location: complement(join(8236333..8238220,8243284..8243408,8244918..8245055,8248888..8249143))
location: region:8236333-8249143:-1
so has part: feature:8248888-8249143:-1:exon
so has part: feature:8244918-8245055:-1:exon
so has part: feature:8243284-8243408:-1:exon
so has part: feature:8236333-8238220:-1:exon

position:8236333:-1
position: 8236333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8249143:-1
position: 8249143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8248888-8249143:-1:exon

position:8248888:-1
position: 8248888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8244918-8245055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8243284-8243408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8236333-8238220:-1:exon

SMIM19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SMIM19
product: small integral membrane protein 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_018041877.1
SIO_010081: SMIM19
subclass of: SO_0000673
so part of: SMIM19
location: complement(join(8236333..8238220,8243284..8243408,8244918..8245055,8245818..8245924))
location: region:8236333-8245924:-1
so has part: feature:8245818-8245924:-1:exon
so has part: feature:8244918-8245055:-1:exon
so has part: feature:8243284-8243408:-1:exon
so has part: feature:8236333-8238220:-1:exon

position:8245924:-1
position: 8245924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8245818-8245924:-1:exon

position:8245818:-1
position: 8245818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8244918-8245055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8243284-8243408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8236333-8238220:-1:exon

SMIM19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SMIM19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 19
translation: MPGGYGVMGDDGAMDYSVHEAWNEATNVYLVVILVSFGLFMYAKRNKRKIMRIFSLPPPAETLSEPNFYDTISKIRLRQQLEMYSISRKYDYQQPQNQADSVQLSLE
SIO_010081: SMIM19
subclass of: SO_0000673
so part of: SMIM19
location: complement(join(8238156..8238220,8243284..8243408,8244918..8245051))
location: region:8238156-8245051:-1
so has part: feature:8244918-8245051:-1:exon
so has part: feature:8243284-8243408:-1:exon
so has part: feature:8238156-8238220:-1:exon

XP_017897366.1
type: Protein
SIO_000068: ncbiprotein

position:8238156:-1
position: 8238156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8245051:-1
position: 8245051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8244918-8245051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8243284-8243408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8238156-8238220:-1:exon

SMIM19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SMIM19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 19
translation: MPGGYGVMGDDGAMDYSVHEAWNEATNVYLVVILVSFGLFMYAKRNKRKIMRIFSLPPPAETLSEPNFYDTISKIRLRQQLEMYSISRKYDYQQPQNQADSVQLSLE
SIO_010081: SMIM19
subclass of: SO_0000673
so part of: SMIM19
location: complement(join(8238156..8238220,8243284..8243408,8244918..8245051))
location: region:8238156-8245051:-1
so has part: feature:8244918-8245051:-1:exon
so has part: feature:8243284-8243408:-1:exon
so has part: feature:8238156-8238220:-1:exon

XP_017897367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8244918-8245051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8243284-8243408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8238156-8238220:-1:exon

SMIM19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SMIM19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 19
translation: MPGGYGVMGDDGAMDYSVHEAWNEATNVYLVVILVSFGLFMYAKRNKRKIMRIFSLPPPAETLSEPNFYDTISKIRLRQQLEMYSISRKYDYQQPQNQADSVQLSLE
SIO_010081: SMIM19
subclass of: SO_0000673
so part of: SMIM19
location: complement(join(8238156..8238220,8243284..8243408,8244918..8245051))
location: region:8238156-8245051:-1
so has part: feature:8244918-8245051:-1:exon
so has part: feature:8243284-8243408:-1:exon
so has part: feature:8238156-8238220:-1:exon

XP_017897368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8244918-8245051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8243284-8243408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8238156-8238220:-1:exon

SMIM19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SMIM19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 19
translation: MPGGYGVMGDDGAMDYSVHEAWNEATNVYLVVILVSFGLFMYAKRNKRKIMRIFSLPPPAETLSEPNFYDTISKIRLRQQLEMYSISRKYDYQQPQNQADSVQLSLE
SIO_010081: SMIM19
subclass of: SO_0000673
so part of: SMIM19
location: complement(join(8238156..8238220,8243284..8243408,8244918..8245051))
location: region:8238156-8245051:-1
so has part: feature:8244918-8245051:-1:exon
so has part: feature:8243284-8243408:-1:exon
so has part: feature:8238156-8238220:-1:exon

XP_017897369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8244918-8245051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8243284-8243408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8238156-8238220:-1:exon

SLC20A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8249273..8359513
location: region:8249273-8359513:1
so has part: feature:8249273-8359513:1:exon
subclass of: SO_0000010

102178509
type: Gene
SIO_000068: ncbigene

position:8249273:1
position: 8249273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8359513:1
position: 8359513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8249273-8359513:1:exon

SLC20A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SLC20A2
product: solute carrier family 20 member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_018041867.1
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(8249273..8249384,8253490..8253974,8255115..8255213,8308471..8309022,8317646..8317786,8319046..8319131,8322368..8322464,8334345..8334461,8339577..8339780,8341097..8341664,8349661..8349846,8351025..8351109,8358025..8359513)
location: region:8249273-8359513:1
so has part: feature:8249273-8249384:1:exon
so has part: feature:8253490-8253974:1:exon
so has part: feature:8255115-8255213:1:exon
so has part: feature:8308471-8309022:1:exon
so has part: feature:8317646-8317786:1:exon
so has part: feature:8319046-8319131:1:exon
so has part: feature:8322368-8322464:1:exon
so has part: feature:8334345-8334461:1:exon
so has part: feature:8339577-8339780:1:exon
so has part: feature:8341097-8341664:1:exon
so has part: feature:8349661-8349846:1:exon
so has part: feature:8351025-8351109:1:exon
so has part: feature:8358025-8359513:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8249273-8249384:1:exon

position:8249384:1
position: 8249384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8253490-8253974:1:exon

position:8253490:1
position: 8253490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8253974:1
position: 8253974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8255115-8255213:1:exon

position:8255115:1
position: 8255115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8255213:1
position: 8255213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8308471-8309022:1:exon

position:8308471:1
position: 8308471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8309022:1
position: 8309022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8317646-8317786:1:exon

position:8317646:1
position: 8317646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8317786:1
position: 8317786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8319046-8319131:1:exon

position:8319046:1
position: 8319046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8319131:1
position: 8319131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8322368-8322464:1:exon

position:8322368:1
position: 8322368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8322464:1
position: 8322464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8334345-8334461:1:exon

position:8334345:1
position: 8334345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8334461:1
position: 8334461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8339577-8339780:1:exon

position:8339577:1
position: 8339577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8339780:1
position: 8339780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8341097-8341664:1:exon

position:8341097:1
position: 8341097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8341664:1
position: 8341664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8349661-8349846:1:exon

position:8349661:1
position: 8349661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8349846:1
position: 8349846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8351025-8351109:1:exon

position:8351025:1
position: 8351025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8351109:1
position: 8351109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8358025-8359513:1:exon

position:8358025:1
position: 8358025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC20A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SLC20A2
product: solute carrier family 20 member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_018041869.1
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(8249280..8249384,8308471..8309022,8317646..8317786,8319046..8319131,8322368..8322464,8334345..8334461,8339577..8339780,8341097..8341664,8349661..8349846,8351025..8351109,8358025..8359513)
location: region:8249280-8359513:1
so has part: feature:8249280-8249384:1:exon
so has part: feature:8308471-8309022:1:exon
so has part: feature:8317646-8317786:1:exon
so has part: feature:8319046-8319131:1:exon
so has part: feature:8322368-8322464:1:exon
so has part: feature:8334345-8334461:1:exon
so has part: feature:8339577-8339780:1:exon
so has part: feature:8341097-8341664:1:exon
so has part: feature:8349661-8349846:1:exon
so has part: feature:8351025-8351109:1:exon
so has part: feature:8358025-8359513:1:exon

position:8249280:1
position: 8249280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8249280-8249384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8308471-8309022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8317646-8317786:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8319046-8319131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8322368-8322464:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8334345-8334461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8339577-8339780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8341097-8341664:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8349661-8349846:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8351025-8351109:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8358025-8359513:1:exon

SLC20A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SLC20A2
product: solute carrier family 20 member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 ESTs, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_018041866.1
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(8249589..8253974,8255115..8255213,8308471..8309022,8317646..8317786,8319046..8319131,8322368..8322464,8334345..8334461,8339577..8339780,8341097..8341664,8349661..8349846,8351025..8351109,8358025..8359513)
location: region:8249589-8359513:1
so has part: feature:8249589-8253974:1:exon
so has part: feature:8255115-8255213:1:exon
so has part: feature:8308471-8309022:1:exon
so has part: feature:8317646-8317786:1:exon
so has part: feature:8319046-8319131:1:exon
so has part: feature:8322368-8322464:1:exon
so has part: feature:8334345-8334461:1:exon
so has part: feature:8339577-8339780:1:exon
so has part: feature:8341097-8341664:1:exon
so has part: feature:8349661-8349846:1:exon
so has part: feature:8351025-8351109:1:exon
so has part: feature:8358025-8359513:1:exon

position:8249589:1
position: 8249589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8249589-8253974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8255115-8255213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8308471-8309022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8317646-8317786:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8319046-8319131:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8322368-8322464:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8334345-8334461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8339577-8339780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8341097-8341664:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8349661-8349846:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8351025-8351109:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8358025-8359513:1:exon

SLC20A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SLC20A2
product: solute carrier family 20 member 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_018041870.1
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(8284425..8284678,8294408..8294580,8308471..8309022,8317646..8317786,8319046..8319131,8322368..8322464,8334345..8334461,8339577..8339780,8341097..8341664,8349661..8349846,8351025..8351109,8358025..8359513)
location: region:8284425-8359513:1
so has part: feature:8284425-8284678:1:exon
so has part: feature:8294408-8294580:1:exon
so has part: feature:8308471-8309022:1:exon
so has part: feature:8317646-8317786:1:exon
so has part: feature:8319046-8319131:1:exon
so has part: feature:8322368-8322464:1:exon
so has part: feature:8334345-8334461:1:exon
so has part: feature:8339577-8339780:1:exon
so has part: feature:8341097-8341664:1:exon
so has part: feature:8349661-8349846:1:exon
so has part: feature:8351025-8351109:1:exon
so has part: feature:8358025-8359513:1:exon

position:8284425:1
position: 8284425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8284425-8284678:1:exon

position:8284678:1
position: 8284678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8294408-8294580:1:exon

position:8294408:1
position: 8294408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8294580:1
position: 8294580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8308471-8309022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8317646-8317786:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8319046-8319131:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8322368-8322464:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8334345-8334461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8339577-8339780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8341097-8341664:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8349661-8349846:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8351025-8351109:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8358025-8359513:1:exon

SLC20A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SLC20A2
product: solute carrier family 20 member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 26 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_018041868.1
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(8284425..8284678,8308471..8309022,8317646..8317786,8319046..8319131,8322368..8322464,8334345..8334461,8339577..8339780,8341097..8341664,8349661..8349846,8351025..8351109,8358025..8359513)
location: region:8284425-8359513:1
so has part: feature:8284425-8284678:1:exon
so has part: feature:8308471-8309022:1:exon
so has part: feature:8317646-8317786:1:exon
so has part: feature:8319046-8319131:1:exon
so has part: feature:8322368-8322464:1:exon
so has part: feature:8334345-8334461:1:exon
so has part: feature:8339577-8339780:1:exon
so has part: feature:8341097-8341664:1:exon
so has part: feature:8349661-8349846:1:exon
so has part: feature:8351025-8351109:1:exon
so has part: feature:8358025-8359513:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8284425-8284678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8308471-8309022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8317646-8317786:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8319046-8319131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8322368-8322464:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8334345-8334461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8339577-8339780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8341097-8341664:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8349661-8349846:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8351025-8351109:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8358025-8359513:1:exon

SLC20A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SLC20A2
product: solute carrier family 20 member 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018041872.1
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(8303294..8303313,8308471..8309022,8317646..8317786,8319046..8319131,8322368..8322464,8334345..8334461,8339577..8339780,8341097..8341664,8349661..8349846,8351025..8351109,8358025..8359513)
location: region:8303294-8359513:1
so has part: feature:8303294-8303313:1:exon
so has part: feature:8308471-8309022:1:exon
so has part: feature:8317646-8317786:1:exon
so has part: feature:8319046-8319131:1:exon
so has part: feature:8322368-8322464:1:exon
so has part: feature:8334345-8334461:1:exon
so has part: feature:8339577-8339780:1:exon
so has part: feature:8341097-8341664:1:exon
so has part: feature:8349661-8349846:1:exon
so has part: feature:8351025-8351109:1:exon
so has part: feature:8358025-8359513:1:exon

position:8303294:1
position: 8303294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8303294-8303313:1:exon

position:8303313:1
position: 8303313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8308471-8309022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8317646-8317786:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8319046-8319131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8322368-8322464:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8334345-8334461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8339577-8339780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8341097-8341664:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8349661-8349846:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8351025-8351109:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8358025-8359513:1:exon

SLC20A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 2
translation: MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNNTVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVGATIGFSLVAIGTQGVQWMELVKIVASWFISPLLSGFMSGVLFVLIRMFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVMGLVLPMWAIALISFGVALLFALFVWLFVCPWMRRKITGKLQKEGALSRASDESLNKIQEVESPVFKELPGAKAHDDSTVPLTGSAAEPSGTSESMSGGHHPRAPYGRALSMTHGTTKSPVSNGTFGFDGTARADGHVYHTVHKDSGLYKDLLHRIRDERPADGAPRQLRRNNSYTCYTAAICGLPGLATRRGDTPAPEDSEKLVADAVAYSRRRLRYDSYSSYCNAVAEAEIEAEEGGVEVRLAPPLAEPEPPRDDPVDEEKEEKDSAEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYEQGAVLQEAATPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAIMALLIHGILPFV
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(8308734..8309022,8317646..8317786,8319046..8319131,8322368..8322464,8334345..8334461,8339577..8339780,8341097..8341664,8349661..8349846,8351025..8351109,8358025..8358189)
location: region:8308734-8358189:1
so has part: feature:8308734-8309022:1:exon
so has part: feature:8317646-8317786:1:exon
so has part: feature:8319046-8319131:1:exon
so has part: feature:8322368-8322464:1:exon
so has part: feature:8334345-8334461:1:exon
so has part: feature:8339577-8339780:1:exon
so has part: feature:8341097-8341664:1:exon
so has part: feature:8349661-8349846:1:exon
so has part: feature:8351025-8351109:1:exon
so has part: feature:8358025-8358189:1:exon

XP_017897355.1
type: Protein
SIO_000068: ncbiprotein

position:8308734:1
position: 8308734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8358189:1
position: 8358189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8308734-8309022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8317646-8317786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8319046-8319131:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8322368-8322464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8334345-8334461:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8339577-8339780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8341097-8341664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8349661-8349846:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8351025-8351109:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8358025-8358189:1:exon

SLC20A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 2
translation: MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNNTVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVGATIGFSLVAIGTQGVQWMELVKIVASWFISPLLSGFMSGVLFVLIRMFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVMGLVLPMWAIALISFGVALLFALFVWLFVCPWMRRKITGKLQKEGALSRASDESLNKIQEVESPVFKELPGAKAHDDSTVPLTGSAAEPSGTSESMSGGHHPRAPYGRALSMTHGTTKSPVSNGTFGFDGTARADGHVYHTVHKDSGLYKDLLHRIRDERPADGAPRQLRRNNSYTCYTAAICGLPGLATRRGDTPAPEDSEKLVADAVAYSRRRLRYDSYSSYCNAVAEAEIEAEEGGVEVRLAPPLAEPEPPRDDPVDEEKEEKDSAEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYEQGAVLQEAATPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAIMALLIHGILPFV
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(8308734..8309022,8317646..8317786,8319046..8319131,8322368..8322464,8334345..8334461,8339577..8339780,8341097..8341664,8349661..8349846,8351025..8351109,8358025..8358189)
location: region:8308734-8358189:1
so has part: feature:8308734-8309022:1:exon
so has part: feature:8317646-8317786:1:exon
so has part: feature:8319046-8319131:1:exon
so has part: feature:8322368-8322464:1:exon
so has part: feature:8334345-8334461:1:exon
so has part: feature:8339577-8339780:1:exon
so has part: feature:8341097-8341664:1:exon
so has part: feature:8349661-8349846:1:exon
so has part: feature:8351025-8351109:1:exon
so has part: feature:8358025-8358189:1:exon

XP_017897356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8308734-8309022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8317646-8317786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8319046-8319131:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8322368-8322464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8334345-8334461:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8339577-8339780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8341097-8341664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8349661-8349846:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8351025-8351109:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8358025-8358189:1:exon

SLC20A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 2
translation: MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNNTVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVGATIGFSLVAIGTQGVQWMELVKIVASWFISPLLSGFMSGVLFVLIRMFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVMGLVLPMWAIALISFGVALLFALFVWLFVCPWMRRKITGKLQKEGALSRASDESLNKIQEVESPVFKELPGAKAHDDSTVPLTGSAAEPSGTSESMSGGHHPRAPYGRALSMTHGTTKSPVSNGTFGFDGTARADGHVYHTVHKDSGLYKDLLHRIRDERPADGAPRQLRRNNSYTCYTAAICGLPGLATRRGDTPAPEDSEKLVADAVAYSRRRLRYDSYSSYCNAVAEAEIEAEEGGVEVRLAPPLAEPEPPRDDPVDEEKEEKDSAEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYEQGAVLQEAATPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAIMALLIHGILPFV
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(8308734..8309022,8317646..8317786,8319046..8319131,8322368..8322464,8334345..8334461,8339577..8339780,8341097..8341664,8349661..8349846,8351025..8351109,8358025..8358189)
location: region:8308734-8358189:1
so has part: feature:8308734-8309022:1:exon
so has part: feature:8317646-8317786:1:exon
so has part: feature:8319046-8319131:1:exon
so has part: feature:8322368-8322464:1:exon
so has part: feature:8334345-8334461:1:exon
so has part: feature:8339577-8339780:1:exon
so has part: feature:8341097-8341664:1:exon
so has part: feature:8349661-8349846:1:exon
so has part: feature:8351025-8351109:1:exon
so has part: feature:8358025-8358189:1:exon

XP_017897357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8308734-8309022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8317646-8317786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8319046-8319131:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8322368-8322464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8334345-8334461:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8339577-8339780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8341097-8341664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8349661-8349846:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8351025-8351109:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8358025-8358189:1:exon

SLC20A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 2
translation: MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNNTVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVGATIGFSLVAIGTQGVQWMELVKIVASWFISPLLSGFMSGVLFVLIRMFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVMGLVLPMWAIALISFGVALLFALFVWLFVCPWMRRKITGKLQKEGALSRASDESLNKIQEVESPVFKELPGAKAHDDSTVPLTGSAAEPSGTSESMSGGHHPRAPYGRALSMTHGTTKSPVSNGTFGFDGTARADGHVYHTVHKDSGLYKDLLHRIRDERPADGAPRQLRRNNSYTCYTAAICGLPGLATRRGDTPAPEDSEKLVADAVAYSRRRLRYDSYSSYCNAVAEAEIEAEEGGVEVRLAPPLAEPEPPRDDPVDEEKEEKDSAEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYEQGAVLQEAATPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAIMALLIHGILPFV
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(8308734..8309022,8317646..8317786,8319046..8319131,8322368..8322464,8334345..8334461,8339577..8339780,8341097..8341664,8349661..8349846,8351025..8351109,8358025..8358189)
location: region:8308734-8358189:1
so has part: feature:8308734-8309022:1:exon
so has part: feature:8317646-8317786:1:exon
so has part: feature:8319046-8319131:1:exon
so has part: feature:8322368-8322464:1:exon
so has part: feature:8334345-8334461:1:exon
so has part: feature:8339577-8339780:1:exon
so has part: feature:8341097-8341664:1:exon
so has part: feature:8349661-8349846:1:exon
so has part: feature:8351025-8351109:1:exon
so has part: feature:8358025-8358189:1:exon

XP_017897358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8308734-8309022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8317646-8317786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8319046-8319131:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8322368-8322464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8334345-8334461:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8339577-8339780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8341097-8341664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8349661-8349846:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8351025-8351109:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8358025-8358189:1:exon

SLC20A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 2
translation: MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNNTVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVGATIGFSLVAIGTQGVQWMELVKIVASWFISPLLSGFMSGVLFVLIRMFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVMGLVLPMWAIALISFGVALLFALFVWLFVCPWMRRKITGKLQKEGALSRASDESLNKIQEVESPVFKELPGAKAHDDSTVPLTGSAAEPSGTSESMSGGHHPRAPYGRALSMTHGTTKSPVSNGTFGFDGTARADGHVYHTVHKDSGLYKDLLHRIRDERPADGAPRQLRRNNSYTCYTAAICGLPGLATRRGDTPAPEDSEKLVADAVAYSRRRLRYDSYSSYCNAVAEAEIEAEEGGVEVRLAPPLAEPEPPRDDPVDEEKEEKDSAEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYEQGAVLQEAATPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAIMALLIHGILPFV
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(8308734..8309022,8317646..8317786,8319046..8319131,8322368..8322464,8334345..8334461,8339577..8339780,8341097..8341664,8349661..8349846,8351025..8351109,8358025..8358189)
location: region:8308734-8358189:1
so has part: feature:8308734-8309022:1:exon
so has part: feature:8317646-8317786:1:exon
so has part: feature:8319046-8319131:1:exon
so has part: feature:8322368-8322464:1:exon
so has part: feature:8334345-8334461:1:exon
so has part: feature:8339577-8339780:1:exon
so has part: feature:8341097-8341664:1:exon
so has part: feature:8349661-8349846:1:exon
so has part: feature:8351025-8351109:1:exon
so has part: feature:8358025-8358189:1:exon

XP_017897359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8308734-8309022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8317646-8317786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8319046-8319131:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8322368-8322464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8334345-8334461:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8339577-8339780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8341097-8341664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8349661-8349846:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8351025-8351109:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8358025-8358189:1:exon

SLC20A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 2
translation: MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNNTVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVGATIGFSLVAIGTQGVQWMELVKIVASWFISPLLSGFMSGVLFVLIRMFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVMGLVLPMWAIALISFGVALLFALFVWLFVCPWMRRKITGKLQKEGALSRASDESLNKIQEVESPVFKELPGAKAHDDSTVPLTGSAAEPSGTSESMSGGHHPRAPYGRALSMTHGTTKSPVSNGTFGFDGTARADGHVYHTVHKDSGLYKDLLHRIRDERPADGAPRQLRRNNSYTCYTAAICGLPGLATRRGDTPAPEDSEKLVADAVAYSRRRLRYDSYSSYCNAVAEAEIEAEEGGVEVRLAPPLAEPEPPRDDPVDEEKEEKDSAEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYEQGAVLQEAATPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAIMALLIHGILPFV
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(8308734..8309022,8317646..8317786,8319046..8319131,8322368..8322464,8334345..8334461,8339577..8339780,8341097..8341664,8349661..8349846,8351025..8351109,8358025..8358189)
location: region:8308734-8358189:1
so has part: feature:8308734-8309022:1:exon
so has part: feature:8317646-8317786:1:exon
so has part: feature:8319046-8319131:1:exon
so has part: feature:8322368-8322464:1:exon
so has part: feature:8334345-8334461:1:exon
so has part: feature:8339577-8339780:1:exon
so has part: feature:8341097-8341664:1:exon
so has part: feature:8349661-8349846:1:exon
so has part: feature:8351025-8351109:1:exon
so has part: feature:8358025-8358189:1:exon

XP_017897361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8308734-8309022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8317646-8317786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8319046-8319131:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8322368-8322464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8334345-8334461:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8339577-8339780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8341097-8341664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8349661-8349846:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8351025-8351109:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8358025-8358189:1:exon

LOC102175183
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102175183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8311826..8312451
location: region:8311826-8312451:1
so has part: feature:8311826-8312451:1:exon

102175183
type: Gene
SIO_000068: ncbigene

position:8311826:1
position: 8311826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8312451:1
position: 8312451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8311826-8312451:1:exon

LOC102175183
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102175183
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102175183
subclass of: SO_0000673
so part of: LOC102175183
location: 8311826..8312451
location: region:8311826-8312451:1
so has part: feature:8311826-8312451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8311826-8312451:1:exon

VDAC3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8364573..8376630)
location: region:8364573-8376630:-1
so has part: feature:8364573-8376630:-1:exon
subclass of: SO_0000010

102176666
type: Gene
SIO_000068: ncbigene

position:8364573:-1
position: 8364573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8376630:-1
position: 8376630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8364573-8376630:-1:exon

VDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: VDAC3
product: voltage dependent anion channel 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 201 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_018041876.1
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(8364573..8365100,8365520..8365577,8366690..8366840,8368038..8368265,8369376..8369428,8370292..8370444,8373038..8373087,8373952..8374020,8376417..8376630))
location: region:8364573-8376630:-1
so has part: feature:8376417-8376630:-1:exon
so has part: feature:8373952-8374020:-1:exon
so has part: feature:8373038-8373087:-1:exon
so has part: feature:8370292-8370444:-1:exon
so has part: feature:8369376-8369428:-1:exon
so has part: feature:8368038-8368265:-1:exon
so has part: feature:8366690-8366840:-1:exon
so has part: feature:8365520-8365577:-1:exon
so has part: feature:8364573-8365100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8376417-8376630:-1:exon

position:8376417:-1
position: 8376417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8373952-8374020:-1:exon

position:8373952:-1
position: 8373952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8374020:-1
position: 8374020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8373038-8373087:-1:exon

position:8373038:-1
position: 8373038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8373087:-1
position: 8373087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8370292-8370444:-1:exon

position:8370292:-1
position: 8370292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8370444:-1
position: 8370444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8369376-8369428:-1:exon

position:8369376:-1
position: 8369376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8369428:-1
position: 8369428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8368038-8368265:-1:exon

position:8368038:-1
position: 8368038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8368265:-1
position: 8368265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8366690-8366840:-1:exon

position:8366690:-1
position: 8366690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8366840:-1
position: 8366840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8365520-8365577:-1:exon

position:8365520:-1
position: 8365520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8365577:-1
position: 8365577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8364573-8365100:-1:exon

position:8365100:-1
position: 8365100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: VDAC3
product: voltage dependent anion channel 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 94 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_018041873.1
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(8364573..8365100,8365520..8365577,8366690..8366840,8368038..8368265,8369376..8369428,8370292..8370444,8372068..8372070,8373038..8373087,8373952..8374020,8376417..8376603))
location: region:8364573-8376603:-1
so has part: feature:8376417-8376603:-1:exon
so has part: feature:8373952-8374020:-1:exon
so has part: feature:8373038-8373087:-1:exon
so has part: feature:8372068-8372070:-1:exon
so has part: feature:8370292-8370444:-1:exon
so has part: feature:8369376-8369428:-1:exon
so has part: feature:8368038-8368265:-1:exon
so has part: feature:8366690-8366840:-1:exon
so has part: feature:8365520-8365577:-1:exon
so has part: feature:8364573-8365100:-1:exon

position:8376603:-1
position: 8376603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8376417-8376603:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8373952-8374020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8373038-8373087:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8372068-8372070:-1:exon

position:8372068:-1
position: 8372068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8372070:-1
position: 8372070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8370292-8370444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8369376-8369428:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8368038-8368265:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8366690-8366840:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8365520-8365577:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8364573-8365100:-1:exon

VDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: VDAC3
product: voltage dependent anion channel 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_018041875.1
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(8364573..8365100,8365520..8365577,8366690..8366840,8368038..8368265,8369376..8369428,8370292..8370444,8372068..8372070,8373038..8373087,8373952..8374020,8376323..8376340))
location: region:8364573-8376340:-1
so has part: feature:8376323-8376340:-1:exon
so has part: feature:8373952-8374020:-1:exon
so has part: feature:8373038-8373087:-1:exon
so has part: feature:8372068-8372070:-1:exon
so has part: feature:8370292-8370444:-1:exon
so has part: feature:8369376-8369428:-1:exon
so has part: feature:8368038-8368265:-1:exon
so has part: feature:8366690-8366840:-1:exon
so has part: feature:8365520-8365577:-1:exon
so has part: feature:8364573-8365100:-1:exon

position:8376340:-1
position: 8376340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8376323-8376340:-1:exon

position:8376323:-1
position: 8376323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8373952-8374020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8373038-8373087:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8372068-8372070:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8370292-8370444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8369376-8369428:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8368038-8368265:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8366690-8366840:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8365520-8365577:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8364573-8365100:-1:exon

VDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: VDAC3
product: voltage dependent anion channel 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_018041874.1
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(8364573..8365100,8365520..8365577,8366690..8366840,8368038..8368265,8369376..8369428,8370292..8370444,8372068..8372070,8373038..8373087,8373952..8374020,8375799..8375817))
location: region:8364573-8375817:-1
so has part: feature:8375799-8375817:-1:exon
so has part: feature:8373952-8374020:-1:exon
so has part: feature:8373038-8373087:-1:exon
so has part: feature:8372068-8372070:-1:exon
so has part: feature:8370292-8370444:-1:exon
so has part: feature:8369376-8369428:-1:exon
so has part: feature:8368038-8368265:-1:exon
so has part: feature:8366690-8366840:-1:exon
so has part: feature:8365520-8365577:-1:exon
so has part: feature:8364573-8365100:-1:exon

position:8375817:-1
position: 8375817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8375799-8375817:-1:exon

position:8375799:-1
position: 8375799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8373952-8374020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8373038-8373087:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8372068-8372070:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8370292-8370444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8369376-8369428:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8368038-8368265:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8366690-8366840:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8365520-8365577:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8364573-8365100:-1:exon

VDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent anion-selective channel protein 3 isoform X2
translation: MCNTPTYCDLGKAAKDVFNKGYGFGMVKIDLRTKSCSGVEFSTSGHAYTDTGKASGNLETKYKICNYGLTFTQKWNTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGHKVGLGFELEA
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(8365009..8365100,8365520..8365577,8366690..8366840,8368038..8368265,8369376..8369428,8370292..8370444,8373038..8373087,8373952..8374018))
location: region:8365009-8374018:-1
so has part: feature:8373952-8374018:-1:exon
so has part: feature:8373038-8373087:-1:exon
so has part: feature:8370292-8370444:-1:exon
so has part: feature:8369376-8369428:-1:exon
so has part: feature:8368038-8368265:-1:exon
so has part: feature:8366690-8366840:-1:exon
so has part: feature:8365520-8365577:-1:exon
so has part: feature:8365009-8365100:-1:exon

XP_017897365.1
type: Protein
SIO_000068: ncbiprotein

position:8365009:-1
position: 8365009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8374018:-1
position: 8374018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8373952-8374018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8373038-8373087:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8370292-8370444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8369376-8369428:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8368038-8368265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8366690-8366840:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8365520-8365577:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8365009-8365100:-1:exon

VDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent anion-selective channel protein 3 isoform X1
translation: MCNTPTYCDLGKAAKDVFNKGYGFGMVKIDLRTKSCSGVMEFSTSGHAYTDTGKASGNLETKYKICNYGLTFTQKWNTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGHKVGLGFELEA
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(8365009..8365100,8365520..8365577,8366690..8366840,8368038..8368265,8369376..8369428,8370292..8370444,8372068..8372070,8373038..8373087,8373952..8374018))
location: region:8365009-8374018:-1
so has part: feature:8373952-8374018:-1:exon
so has part: feature:8373038-8373087:-1:exon
so has part: feature:8372068-8372070:-1:exon
so has part: feature:8370292-8370444:-1:exon
so has part: feature:8369376-8369428:-1:exon
so has part: feature:8368038-8368265:-1:exon
so has part: feature:8366690-8366840:-1:exon
so has part: feature:8365520-8365577:-1:exon
so has part: feature:8365009-8365100:-1:exon

XP_017897362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8373952-8374018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8373038-8373087:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8372068-8372070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8370292-8370444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8369376-8369428:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8368038-8368265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8366690-8366840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8365520-8365577:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8365009-8365100:-1:exon

VDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent anion-selective channel protein 3 isoform X1
translation: MCNTPTYCDLGKAAKDVFNKGYGFGMVKIDLRTKSCSGVMEFSTSGHAYTDTGKASGNLETKYKICNYGLTFTQKWNTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGHKVGLGFELEA
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(8365009..8365100,8365520..8365577,8366690..8366840,8368038..8368265,8369376..8369428,8370292..8370444,8372068..8372070,8373038..8373087,8373952..8374018))
location: region:8365009-8374018:-1
so has part: feature:8373952-8374018:-1:exon
so has part: feature:8373038-8373087:-1:exon
so has part: feature:8372068-8372070:-1:exon
so has part: feature:8370292-8370444:-1:exon
so has part: feature:8369376-8369428:-1:exon
so has part: feature:8368038-8368265:-1:exon
so has part: feature:8366690-8366840:-1:exon
so has part: feature:8365520-8365577:-1:exon
so has part: feature:8365009-8365100:-1:exon

XP_017897363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8373952-8374018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8373038-8373087:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8372068-8372070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8370292-8370444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8369376-8369428:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8368038-8368265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8366690-8366840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8365520-8365577:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8365009-8365100:-1:exon

VDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent anion-selective channel protein 3 isoform X1
translation: MCNTPTYCDLGKAAKDVFNKGYGFGMVKIDLRTKSCSGVMEFSTSGHAYTDTGKASGNLETKYKICNYGLTFTQKWNTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGHKVGLGFELEA
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(8365009..8365100,8365520..8365577,8366690..8366840,8368038..8368265,8369376..8369428,8370292..8370444,8372068..8372070,8373038..8373087,8373952..8374018))
location: region:8365009-8374018:-1
so has part: feature:8373952-8374018:-1:exon
so has part: feature:8373038-8373087:-1:exon
so has part: feature:8372068-8372070:-1:exon
so has part: feature:8370292-8370444:-1:exon
so has part: feature:8369376-8369428:-1:exon
so has part: feature:8368038-8368265:-1:exon
so has part: feature:8366690-8366840:-1:exon
so has part: feature:8365520-8365577:-1:exon
so has part: feature:8365009-8365100:-1:exon

XP_017897364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8373952-8374018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8373038-8373087:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8372068-8372070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8370292-8370444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8369376-8369428:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8368038-8368265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8366690-8366840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8365520-8365577:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8365009-8365100:-1:exon

LOC108634066
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8375866..8376837
location: region:8375866-8376837:1
so has part: feature:8375866-8376837:1:exon
subclass of: SO_0000010

108634066
type: Gene
SIO_000068: ncbigene

position:8375866:1
position: 8375866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8376837:1
position: 8376837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8375866-8376837:1:exon

LOC108634066
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC108634066
product: skin secretory protein xP2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_018041758.1
SIO_010081: LOC108634066
subclass of: SO_0000673
so part of: LOC108634066
location: 8375866..8376837
location: region:8375866-8376837:1
so has part: feature:8375866-8376837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8375866-8376837:1:exon

LOC108634066
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC108634066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: skin secretory protein xP2-like
translation: MSKQKLEKPQTRHVPTHCRGSADALFRGRARRPRAAGAAGGGGERGEVPGSGVGEQRLQQHHRGDSQLASPPSAGRPAPSPQGQGVQGPPDAGCRGRRGSRGSGVPGPALPRSQPPGDRLGRGAGGGAARPSPEGPVPAAPARGPAPRSAALPPLAASRGSLPDGRPPGRPPPGRQPAAPARLTSDRRALSAPLGGACPLRQGTAEGLLRTNAVRACAAPRPRRLRAPSPEPRAAAAPESRAGGARREPEAAQHLQLSECARAPRRAARGGRRGGCERAGAGPAPLSPEGPALARRRGAHWRPLPAERSSPAASFSSGLLRDL
SIO_010081: LOC108634066
subclass of: SO_0000673
so part of: LOC108634066
location: 8375866..8376837
location: region:8375866-8376837:1
so has part: feature:8375866-8376837:1:exon

XP_017897247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8375866-8376837:1:exon

POLB
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: POLB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8395199..8422898)
location: region:8395199-8422898:-1
so has part: feature:8395199-8422898:-1:exon
subclass of: SO_0000010

102177689
type: Gene
SIO_000068: ncbigene

position:8395199:-1
position: 8395199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8422898:-1
position: 8422898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8395199-8422898:-1:exon

POLB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: POLB
product: DNA polymerase beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 45 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_018042058.1
SIO_010081: POLB
subclass of: SO_0000673
so part of: POLB
location: complement(join(8395199..8395438,8396377..8396516,8398192..8398256,8404055..8404141,8404814..8404884,8409054..8409126,8409224..8409278,8411066..8411117,8413553..8413602,8415385..8415443,8416053..8416127,8419400..8419466,8422282..8422339,8422658..8422898))
location: region:8395199-8422898:-1
so has part: feature:8422658-8422898:-1:exon
so has part: feature:8422282-8422339:-1:exon
so has part: feature:8419400-8419466:-1:exon
so has part: feature:8416053-8416127:-1:exon
so has part: feature:8415385-8415443:-1:exon
so has part: feature:8413553-8413602:-1:exon
so has part: feature:8411066-8411117:-1:exon
so has part: feature:8409224-8409278:-1:exon
so has part: feature:8409054-8409126:-1:exon
so has part: feature:8404814-8404884:-1:exon
so has part: feature:8404055-8404141:-1:exon
so has part: feature:8398192-8398256:-1:exon
so has part: feature:8396377-8396516:-1:exon
so has part: feature:8395199-8395438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8422658-8422898:-1:exon

position:8422658:-1
position: 8422658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8422282-8422339:-1:exon

position:8422282:-1
position: 8422282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8422339:-1
position: 8422339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8419400-8419466:-1:exon

position:8419400:-1
position: 8419400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8419466:-1
position: 8419466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8416053-8416127:-1:exon

position:8416053:-1
position: 8416053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8416127:-1
position: 8416127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8415385-8415443:-1:exon

position:8415385:-1
position: 8415385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8415443:-1
position: 8415443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8413553-8413602:-1:exon

position:8413553:-1
position: 8413553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8413602:-1
position: 8413602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8411066-8411117:-1:exon

position:8411066:-1
position: 8411066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8411117:-1
position: 8411117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8409224-8409278:-1:exon

position:8409224:-1
position: 8409224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8409278:-1
position: 8409278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8409054-8409126:-1:exon

position:8409054:-1
position: 8409054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8409126:-1
position: 8409126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8404814-8404884:-1:exon

position:8404814:-1
position: 8404814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8404884:-1
position: 8404884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8404055-8404141:-1:exon

position:8404055:-1
position: 8404055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8404141:-1
position: 8404141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8398192-8398256:-1:exon

position:8398192:-1
position: 8398192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8398256:-1
position: 8398256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8396377-8396516:-1:exon

position:8396377:-1
position: 8396377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8396516:-1
position: 8396516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8395199-8395438:-1:exon

position:8395438:-1
position: 8395438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: POLB
product: DNA polymerase beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_018042060.1
SIO_010081: POLB
subclass of: SO_0000673
so part of: POLB
location: complement(join(8395199..8395438,8396377..8396516,8398192..8398256,8404055..8404141,8404814..8404884,8413553..8413602,8415385..8415443,8416053..8416127,8419400..8419466,8422282..8422339,8422658..8422850))
location: region:8395199-8422850:-1
so has part: feature:8422658-8422850:-1:exon
so has part: feature:8422282-8422339:-1:exon
so has part: feature:8419400-8419466:-1:exon
so has part: feature:8416053-8416127:-1:exon
so has part: feature:8415385-8415443:-1:exon
so has part: feature:8413553-8413602:-1:exon
so has part: feature:8404814-8404884:-1:exon
so has part: feature:8404055-8404141:-1:exon
so has part: feature:8398192-8398256:-1:exon
so has part: feature:8396377-8396516:-1:exon
so has part: feature:8395199-8395438:-1:exon

position:8422850:-1
position: 8422850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8422658-8422850:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8422282-8422339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8419400-8419466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8416053-8416127:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8415385-8415443:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8413553-8413602:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8404814-8404884:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8404055-8404141:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8398192-8398256:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8396377-8396516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8395199-8395438:-1:exon

POLB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: POLB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase beta isoform X3
translation: MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
SIO_010081: POLB
subclass of: SO_0000673
so part of: POLB
location: complement(join(8395344..8395438,8396377..8396516,8398192..8398256,8404055..8404141,8404814..8404884,8413553..8413602,8415385..8415443,8416053..8416127,8419400..8419466,8422282..8422339,8422658..8422718))
location: region:8395344-8422718:-1
so has part: feature:8422658-8422718:-1:exon
so has part: feature:8422282-8422339:-1:exon
so has part: feature:8419400-8419466:-1:exon
so has part: feature:8416053-8416127:-1:exon
so has part: feature:8415385-8415443:-1:exon
so has part: feature:8413553-8413602:-1:exon
so has part: feature:8404814-8404884:-1:exon
so has part: feature:8404055-8404141:-1:exon
so has part: feature:8398192-8398256:-1:exon
so has part: feature:8396377-8396516:-1:exon
so has part: feature:8395344-8395438:-1:exon

XP_017897549.1
type: Protein
SIO_000068: ncbiprotein

position:8395344:-1
position: 8395344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8422718:-1
position: 8422718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8422658-8422718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8422282-8422339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8419400-8419466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8416053-8416127:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8415385-8415443:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8413553-8413602:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8404814-8404884:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8404055-8404141:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8398192-8398256:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8396377-8396516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8395344-8395438:-1:exon

POLB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: POLB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase beta isoform X1
translation: MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLSEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
SIO_010081: POLB
subclass of: SO_0000673
so part of: POLB
location: complement(join(8395344..8395438,8396377..8396516,8398192..8398256,8404055..8404141,8404814..8404884,8409054..8409126,8409224..8409278,8411066..8411117,8413553..8413602,8415385..8415443,8416053..8416127,8419400..8419466,8422282..8422339,8422658..8422718))
location: region:8395344-8422718:-1
so has part: feature:8422658-8422718:-1:exon
so has part: feature:8422282-8422339:-1:exon
so has part: feature:8419400-8419466:-1:exon
so has part: feature:8416053-8416127:-1:exon
so has part: feature:8415385-8415443:-1:exon
so has part: feature:8413553-8413602:-1:exon
so has part: feature:8411066-8411117:-1:exon
so has part: feature:8409224-8409278:-1:exon
so has part: feature:8409054-8409126:-1:exon
so has part: feature:8404814-8404884:-1:exon
so has part: feature:8404055-8404141:-1:exon
so has part: feature:8398192-8398256:-1:exon
so has part: feature:8396377-8396516:-1:exon
so has part: feature:8395344-8395438:-1:exon

XP_017897547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8422658-8422718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8422282-8422339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8419400-8419466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8416053-8416127:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8415385-8415443:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8413553-8413602:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8411066-8411117:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8409224-8409278:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8409054-8409126:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8404814-8404884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8404055-8404141:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8398192-8398256:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8396377-8396516:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8395344-8395438:-1:exon

POLB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: POLB
product: DNA polymerase beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018042059.1
SIO_010081: POLB
subclass of: SO_0000673
so part of: POLB
location: complement(join(8395445..8395701,8396377..8396516,8398192..8398256,8404055..8404141,8404814..8404884,8409054..8409126,8409224..8409278,8411066..8411117,8413553..8413602,8415385..8415443,8416053..8416127,8419400..8419466,8422282..8422339,8422658..8422854))
location: region:8395445-8422854:-1
so has part: feature:8422658-8422854:-1:exon
so has part: feature:8422282-8422339:-1:exon
so has part: feature:8419400-8419466:-1:exon
so has part: feature:8416053-8416127:-1:exon
so has part: feature:8415385-8415443:-1:exon
so has part: feature:8413553-8413602:-1:exon
so has part: feature:8411066-8411117:-1:exon
so has part: feature:8409224-8409278:-1:exon
so has part: feature:8409054-8409126:-1:exon
so has part: feature:8404814-8404884:-1:exon
so has part: feature:8404055-8404141:-1:exon
so has part: feature:8398192-8398256:-1:exon
so has part: feature:8396377-8396516:-1:exon
so has part: feature:8395445-8395701:-1:exon

position:8395445:-1
position: 8395445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8422854:-1
position: 8422854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8422658-8422854:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8422282-8422339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8419400-8419466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8416053-8416127:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8415385-8415443:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8413553-8413602:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8411066-8411117:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8409224-8409278:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8409054-8409126:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8404814-8404884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8404055-8404141:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8398192-8398256:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8396377-8396516:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8395445-8395701:-1:exon

position:8395701:-1
position: 8395701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: POLB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase beta isoform X2
translation: MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLSEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGEIQQRGESWIRVTSKGQS
SIO_010081: POLB
subclass of: SO_0000673
so part of: POLB
location: complement(join(8395643..8395701,8396377..8396516,8398192..8398256,8404055..8404141,8404814..8404884,8409054..8409126,8409224..8409278,8411066..8411117,8413553..8413602,8415385..8415443,8416053..8416127,8419400..8419466,8422282..8422339,8422658..8422718))
location: region:8395643-8422718:-1
so has part: feature:8422658-8422718:-1:exon
so has part: feature:8422282-8422339:-1:exon
so has part: feature:8419400-8419466:-1:exon
so has part: feature:8416053-8416127:-1:exon
so has part: feature:8415385-8415443:-1:exon
so has part: feature:8413553-8413602:-1:exon
so has part: feature:8411066-8411117:-1:exon
so has part: feature:8409224-8409278:-1:exon
so has part: feature:8409054-8409126:-1:exon
so has part: feature:8404814-8404884:-1:exon
so has part: feature:8404055-8404141:-1:exon
so has part: feature:8398192-8398256:-1:exon
so has part: feature:8396377-8396516:-1:exon
so has part: feature:8395643-8395701:-1:exon

XP_017897548.1
type: Protein
SIO_000068: ncbiprotein

position:8395643:-1
position: 8395643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8422658-8422718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8422282-8422339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8419400-8419466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8416053-8416127:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8415385-8415443:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8413553-8413602:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8411066-8411117:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8409224-8409278:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8409054-8409126:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8404814-8404884:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8404055-8404141:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8398192-8398256:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8396377-8396516:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8395643-8395701:-1:exon

LOC108634091
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8404891..8407025)
location: region:8404891-8407025:-1
so has part: feature:8404891-8407025:-1:exon

108634091
type: Gene
SIO_000068: ncbigene

position:8404891:-1
position: 8404891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8407025:-1
position: 8407025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8404891-8407025:-1:exon

LOC108634091
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108634091
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC108634091
subclass of: SO_0000673
so part of: LOC108634091
location: complement(8404891..8407025)
location: region:8404891-8407025:-1
so has part: feature:8404891-8407025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8404891-8407025:-1:exon

IKBKB
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: IKBKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8438656..8492699)
location: region:8438656-8492699:-1
so has part: feature:8438656-8492699:-1:exon
subclass of: SO_0000010

102177406
type: Gene
SIO_000068: ncbigene

position:8438656:-1
position: 8438656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8492699:-1
position: 8492699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8438656-8492699:-1:exon

IKBKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: IKBKB
product: inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_018041970.1
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(8438656..8441167,8443411..8443538,8445118..8445265,8445439..8445538,8445624..8445673,8446652..8446761,8447737..8447798,8447966..8448117,8448668..8448791,8449409..8449523,8450042..8450236,8450458..8450587,8452180..8452287,8455583..8455707,8458827..8458916,8459965..8460053,8473103..8473172,8475968..8476085,8478667..8478761,8491987..8492109,8492590..8492699))
location: region:8438656-8492699:-1
so has part: feature:8492590-8492699:-1:exon
so has part: feature:8491987-8492109:-1:exon
so has part: feature:8478667-8478761:-1:exon
so has part: feature:8475968-8476085:-1:exon
so has part: feature:8473103-8473172:-1:exon
so has part: feature:8459965-8460053:-1:exon
so has part: feature:8458827-8458916:-1:exon
so has part: feature:8455583-8455707:-1:exon
so has part: feature:8452180-8452287:-1:exon
so has part: feature:8450458-8450587:-1:exon
so has part: feature:8450042-8450236:-1:exon
so has part: feature:8449409-8449523:-1:exon
so has part: feature:8448668-8448791:-1:exon
so has part: feature:8447966-8448117:-1:exon
so has part: feature:8447737-8447798:-1:exon
so has part: feature:8446652-8446761:-1:exon
so has part: feature:8445624-8445673:-1:exon
so has part: feature:8445439-8445538:-1:exon
so has part: feature:8445118-8445265:-1:exon
so has part: feature:8443411-8443538:-1:exon
so has part: feature:8438656-8441167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8492590-8492699:-1:exon

position:8492590:-1
position: 8492590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8491987-8492109:-1:exon

position:8491987:-1
position: 8491987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8492109:-1
position: 8492109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8478667-8478761:-1:exon

position:8478667:-1
position: 8478667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8478761:-1
position: 8478761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8475968-8476085:-1:exon

position:8475968:-1
position: 8475968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8476085:-1
position: 8476085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8473103-8473172:-1:exon

position:8473103:-1
position: 8473103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8473172:-1
position: 8473172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8459965-8460053:-1:exon

position:8459965:-1
position: 8459965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8460053:-1
position: 8460053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8458827-8458916:-1:exon

position:8458827:-1
position: 8458827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8458916:-1
position: 8458916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8455583-8455707:-1:exon

position:8455583:-1
position: 8455583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8455707:-1
position: 8455707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8452180-8452287:-1:exon

position:8452180:-1
position: 8452180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8452287:-1
position: 8452287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8450458-8450587:-1:exon

position:8450458:-1
position: 8450458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8450587:-1
position: 8450587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8450042-8450236:-1:exon

position:8450042:-1
position: 8450042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8450236:-1
position: 8450236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8449409-8449523:-1:exon

position:8449409:-1
position: 8449409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8449523:-1
position: 8449523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8448668-8448791:-1:exon

position:8448668:-1
position: 8448668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8448791:-1
position: 8448791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8447966-8448117:-1:exon

position:8447966:-1
position: 8447966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8448117:-1
position: 8448117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8447737-8447798:-1:exon

position:8447737:-1
position: 8447737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8447798:-1
position: 8447798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8446652-8446761:-1:exon

position:8446652:-1
position: 8446652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8446761:-1
position: 8446761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8445624-8445673:-1:exon

position:8445624:-1
position: 8445624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8445673:-1
position: 8445673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8445439-8445538:-1:exon

position:8445439:-1
position: 8445439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8445538:-1
position: 8445538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8445118-8445265:-1:exon

position:8445118:-1
position: 8445118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8445265:-1
position: 8445265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8443411-8443538:-1:exon

position:8443411:-1
position: 8443411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8443538:-1
position: 8443538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8438656-8441167:-1:exon

position:8441167:-1
position: 8441167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IKBKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: IKBKB
product: inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 25 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_018041971.1
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(8438656..8440033,8441077..8441167,8443411..8443538,8445118..8445265,8445439..8445538,8445624..8445673,8446652..8446761,8447737..8447798,8447966..8448117,8448668..8448791,8449409..8449523,8450042..8450236,8450458..8450587,8452180..8452287,8455583..8455707,8458827..8458916,8459965..8460053,8473103..8473172,8475968..8476085,8478667..8478761,8491987..8492103))
location: region:8438656-8492103:-1
so has part: feature:8491987-8492103:-1:exon
so has part: feature:8478667-8478761:-1:exon
so has part: feature:8475968-8476085:-1:exon
so has part: feature:8473103-8473172:-1:exon
so has part: feature:8459965-8460053:-1:exon
so has part: feature:8458827-8458916:-1:exon
so has part: feature:8455583-8455707:-1:exon
so has part: feature:8452180-8452287:-1:exon
so has part: feature:8450458-8450587:-1:exon
so has part: feature:8450042-8450236:-1:exon
so has part: feature:8449409-8449523:-1:exon
so has part: feature:8448668-8448791:-1:exon
so has part: feature:8447966-8448117:-1:exon
so has part: feature:8447737-8447798:-1:exon
so has part: feature:8446652-8446761:-1:exon
so has part: feature:8445624-8445673:-1:exon
so has part: feature:8445439-8445538:-1:exon
so has part: feature:8445118-8445265:-1:exon
so has part: feature:8443411-8443538:-1:exon
so has part: feature:8441077-8441167:-1:exon
so has part: feature:8438656-8440033:-1:exon

position:8492103:-1
position: 8492103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8491987-8492103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8478667-8478761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8475968-8476085:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8473103-8473172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8459965-8460053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8458827-8458916:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8455583-8455707:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8452180-8452287:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8450458-8450587:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8450042-8450236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8449409-8449523:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8448668-8448791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8447966-8448117:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8447737-8447798:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8446652-8446761:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8445624-8445673:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8445439-8445538:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8445118-8445265:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8443411-8443538:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8441077-8441167:-1:exon

position:8441077:-1
position: 8441077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8438656-8440033:-1:exon

position:8440033:-1
position: 8440033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IKBKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: IKBKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of nuclear factor kappa-B kinase subunit beta isoform X2
translation: MSWSPSLPTQTCGAWEMKERLGTGGFGNVIRWHNQETGEQIAIKQCRQELSPRNRERWCLEIQIMRRLNHPNVVAARDVPEGMQSLAPNDLPLLAMEYCQGGDLRKYLNQFENCCGLREGAILTLLSDIASALRYLHENRIIHRDLKPENIVLQQGEQRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHSKVRQKSEMDIVVSEDLNGAVKFSSSLPHPNNLNSVLAQRLEKWLQLMLMWHPRQRGTDPVYGPNGCFKALDDILNLKLLHVLNMVTGTLHTYPVTEDESLQSLKARIRQDTGILEEDQELLQEAGLALIPDKPAAQCLSDGKLNEGRTLDMDLVFLFDNSRVTYESQVSPQPQPESVSCILQEPKRNLPFFQLRKVWGQVWHSIQALKEDCSRLQQGQRAAMMNLLRNNSCLSKMKNSMASMSQQLKAKLDFFKTSIQIDLEKYREQTEFGITSDKLLLAWREMEQAVELCGRENEVKHLVERMMALQTDIVDLQRSPMGRKQGGTLDDLEEQARELYRRLREKPRDQRTDGDSQEMVRLLLQAIQGFEKKVRVIYTQLSKTVVCKQKALELLPKVEEVVSLMSEDEKTVVRLQEKRQKELWNLLKIACSKVRGPVSGSPDSMNASRLSHPSQLMSQPCATPDSLPEAAEKSEDLVAEAHTLCTQLENALQDTMKEQDQSLRSLDWSWLQSEEEEQQGLERAS
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(8439968..8440033,8441077..8441167,8443411..8443538,8445118..8445265,8445439..8445538,8445624..8445673,8446652..8446761,8447737..8447798,8447966..8448117,8448668..8448791,8449409..8449523,8450042..8450236,8450458..8450587,8452180..8452287,8455583..8455707,8458827..8458916,8459965..8460053,8473103..8473172,8475968..8476085,8478667..8478761,8491987..8492091))
location: region:8439968-8492091:-1
so has part: feature:8491987-8492091:-1:exon
so has part: feature:8478667-8478761:-1:exon
so has part: feature:8475968-8476085:-1:exon
so has part: feature:8473103-8473172:-1:exon
so has part: feature:8459965-8460053:-1:exon
so has part: feature:8458827-8458916:-1:exon
so has part: feature:8455583-8455707:-1:exon
so has part: feature:8452180-8452287:-1:exon
so has part: feature:8450458-8450587:-1:exon
so has part: feature:8450042-8450236:-1:exon
so has part: feature:8449409-8449523:-1:exon
so has part: feature:8448668-8448791:-1:exon
so has part: feature:8447966-8448117:-1:exon
so has part: feature:8447737-8447798:-1:exon
so has part: feature:8446652-8446761:-1:exon
so has part: feature:8445624-8445673:-1:exon
so has part: feature:8445439-8445538:-1:exon
so has part: feature:8445118-8445265:-1:exon
so has part: feature:8443411-8443538:-1:exon
so has part: feature:8441077-8441167:-1:exon
so has part: feature:8439968-8440033:-1:exon

XP_017897460.1
type: Protein
SIO_000068: ncbiprotein

position:8439968:-1
position: 8439968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8492091:-1
position: 8492091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8491987-8492091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8478667-8478761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8475968-8476085:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8473103-8473172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8459965-8460053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8458827-8458916:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8455583-8455707:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8452180-8452287:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8450458-8450587:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8450042-8450236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8449409-8449523:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8448668-8448791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8447966-8448117:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8447737-8447798:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8446652-8446761:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8445624-8445673:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8445439-8445538:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8445118-8445265:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8443411-8443538:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8441077-8441167:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8439968-8440033:-1:exon

IKBKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: IKBKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1
translation: MSWSPSLPTQTCGAWEMKERLGTGGFGNVIRWHNQETGEQIAIKQCRQELSPRNRERWCLEIQIMRRLNHPNVVAARDVPEGMQSLAPNDLPLLAMEYCQGGDLRKYLNQFENCCGLREGAILTLLSDIASALRYLHENRIIHRDLKPENIVLQQGEQRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHSKVRQKSEMDIVVSEDLNGAVKFSSSLPHPNNLNSVLAQRLEKWLQLMLMWHPRQRGTDPVYGPNGCFKALDDILNLKLLHVLNMVTGTLHTYPVTEDESLQSLKARIRQDTGILEEDQELLQEAGLALIPDKPAAQCLSDGKLNEGRTLDMDLVFLFDNSRVTYESQVSPQPQPESVSCILQEPKRNLPFFQLRKVWGQVWHSIQALKEDCSRLQQGQRAAMMNLLRNNSCLSKMKNSMASMSQQLKAKLDFFKTSIQIDLEKYREQTEFGITSDKLLLAWREMEQAVELCGRENEVKHLVERMMALQTDIVDLQRSPMGRKQGGTLDDLEEQARELYRRLREKPRDQRTDGDSQEMVRLLLQAIQGFEKKVRVIYTQLSKTVVCKQKALELLPKVEEVVSLMSEDEKTVVRLQEKRQKELWNLLKIACSKVRGPVSGSPDSMNASRLSHPSQLMSQPCATPDSLPEAAEKSEDLVAEAHTLCTQLENALQDTMKEQDQSLRVMAHGEPRCSTPFLFCSKREAEREATPCRLDLSVHLGFSGTTFIFIMITGLTTVERARVPYVLCLLSSSLCLVLMRPVASLGEGLSPALPFCAVAGHACERCSAGLQGQSCHHPISQGLGA
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(8440711..8441167,8443411..8443538,8445118..8445265,8445439..8445538,8445624..8445673,8446652..8446761,8447737..8447798,8447966..8448117,8448668..8448791,8449409..8449523,8450042..8450236,8450458..8450587,8452180..8452287,8455583..8455707,8458827..8458916,8459965..8460053,8473103..8473172,8475968..8476085,8478667..8478761,8491987..8492091))
location: region:8440711-8492091:-1
so has part: feature:8491987-8492091:-1:exon
so has part: feature:8478667-8478761:-1:exon
so has part: feature:8475968-8476085:-1:exon
so has part: feature:8473103-8473172:-1:exon
so has part: feature:8459965-8460053:-1:exon
so has part: feature:8458827-8458916:-1:exon
so has part: feature:8455583-8455707:-1:exon
so has part: feature:8452180-8452287:-1:exon
so has part: feature:8450458-8450587:-1:exon
so has part: feature:8450042-8450236:-1:exon
so has part: feature:8449409-8449523:-1:exon
so has part: feature:8448668-8448791:-1:exon
so has part: feature:8447966-8448117:-1:exon
so has part: feature:8447737-8447798:-1:exon
so has part: feature:8446652-8446761:-1:exon
so has part: feature:8445624-8445673:-1:exon
so has part: feature:8445439-8445538:-1:exon
so has part: feature:8445118-8445265:-1:exon
so has part: feature:8443411-8443538:-1:exon
so has part: feature:8440711-8441167:-1:exon

XP_017897459.1
type: Protein
SIO_000068: ncbiprotein

position:8440711:-1
position: 8440711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8491987-8492091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8478667-8478761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8475968-8476085:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8473103-8473172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8459965-8460053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8458827-8458916:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8455583-8455707:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8452180-8452287:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8450458-8450587:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8450042-8450236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8449409-8449523:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8448668-8448791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8447966-8448117:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8447737-8447798:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8446652-8446761:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8445624-8445673:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8445439-8445538:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8445118-8445265:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8443411-8443538:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8440711-8441167:-1:exon

IKBKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: IKBKB
product: inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_018041972.1
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(8441099..8441180,8443411..8443538,8445118..8445265,8445439..8445538,8445624..8445673,8446652..8446761,8447737..8447798,8447966..8448117,8448668..8448791,8449409..8449523,8450042..8450236,8450458..8450587,8452180..8452287,8455583..8455707,8458827..8458916,8459965..8460053,8473103..8473172,8475968..8476085,8478667..8478761,8491987..8492091))
location: region:8441099-8492091:-1
so has part: feature:8491987-8492091:-1:exon
so has part: feature:8478667-8478761:-1:exon
so has part: feature:8475968-8476085:-1:exon
so has part: feature:8473103-8473172:-1:exon
so has part: feature:8459965-8460053:-1:exon
so has part: feature:8458827-8458916:-1:exon
so has part: feature:8455583-8455707:-1:exon
so has part: feature:8452180-8452287:-1:exon
so has part: feature:8450458-8450587:-1:exon
so has part: feature:8450042-8450236:-1:exon
so has part: feature:8449409-8449523:-1:exon
so has part: feature:8448668-8448791:-1:exon
so has part: feature:8447966-8448117:-1:exon
so has part: feature:8447737-8447798:-1:exon
so has part: feature:8446652-8446761:-1:exon
so has part: feature:8445624-8445673:-1:exon
so has part: feature:8445439-8445538:-1:exon
so has part: feature:8445118-8445265:-1:exon
so has part: feature:8443411-8443538:-1:exon
so has part: feature:8441099-8441180:-1:exon

position:8441099:-1
position: 8441099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8491987-8492091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8478667-8478761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8475968-8476085:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8473103-8473172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8459965-8460053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8458827-8458916:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8455583-8455707:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8452180-8452287:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8450458-8450587:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8450042-8450236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8449409-8449523:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8448668-8448791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8447966-8448117:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8447737-8447798:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8446652-8446761:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8445624-8445673:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8445439-8445538:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8445118-8445265:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8443411-8443538:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8441099-8441180:-1:exon

position:8441180:-1
position: 8441180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IKBKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: IKBKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of nuclear factor kappa-B kinase subunit beta isoform X3
translation: MSWSPSLPTQTCGAWEMKERLGTGGFGNVIRWHNQETGEQIAIKQCRQELSPRNRERWCLEIQIMRRLNHPNVVAARDVPEGMQSLAPNDLPLLAMEYCQGGDLRKYLNQFENCCGLREGAILTLLSDIASALRYLHENRIIHRDLKPENIVLQQGEQRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHSKVRQKSEMDIVVSEDLNGAVKFSSSLPHPNNLNSVLAQRLEKWLQLMLMWHPRQRGTDPVYGPNGCFKALDDILNLKLLHVLNMVTGTLHTYPVTEDESLQSLKARIRQDTGILEEDQELLQEAGLALIPDKPAAQCLSDGKLNEGRTLDMDLVFLFDNSRVTYESQVSPQPQPESVSCILQEPKRNLPFFQLRKVWGQVWHSIQALKEDCSRLQQGQRAAMMNLLRNNSCLSKMKNSMASMSQQLKAKLDFFKTSIQIDLEKYREQTEFGITSDKLLLAWREMEQAVELCGRENEVKHLVERMMALQTDIVDLQRSPMGRKQGGTLDDLEEQARELYRRLREKPRDQRTDGDSQEMVRLLLQAIQGFEKKVRVIYTQLSKTVVCKQKALELLPKVEEVVSLMSEDEKTVVRLQEKRQKELWNLLKIACSKVRGPVSGSPDSMNASRLSHPSQLMSQPCATPDSLPEAAEKSRFL
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(8441168..8441180,8443411..8443538,8445118..8445265,8445439..8445538,8445624..8445673,8446652..8446761,8447737..8447798,8447966..8448117,8448668..8448791,8449409..8449523,8450042..8450236,8450458..8450587,8452180..8452287,8455583..8455707,8458827..8458916,8459965..8460053,8473103..8473172,8475968..8476085,8478667..8478761,8491987..8492091))
location: region:8441168-8492091:-1
so has part: feature:8491987-8492091:-1:exon
so has part: feature:8478667-8478761:-1:exon
so has part: feature:8475968-8476085:-1:exon
so has part: feature:8473103-8473172:-1:exon
so has part: feature:8459965-8460053:-1:exon
so has part: feature:8458827-8458916:-1:exon
so has part: feature:8455583-8455707:-1:exon
so has part: feature:8452180-8452287:-1:exon
so has part: feature:8450458-8450587:-1:exon
so has part: feature:8450042-8450236:-1:exon
so has part: feature:8449409-8449523:-1:exon
so has part: feature:8448668-8448791:-1:exon
so has part: feature:8447966-8448117:-1:exon
so has part: feature:8447737-8447798:-1:exon
so has part: feature:8446652-8446761:-1:exon
so has part: feature:8445624-8445673:-1:exon
so has part: feature:8445439-8445538:-1:exon
so has part: feature:8445118-8445265:-1:exon
so has part: feature:8443411-8443538:-1:exon
so has part: feature:8441168-8441180:-1:exon

XP_017897461.1
type: Protein
SIO_000068: ncbiprotein

position:8441168:-1
position: 8441168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8491987-8492091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8478667-8478761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8475968-8476085:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8473103-8473172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8459965-8460053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8458827-8458916:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8455583-8455707:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8452180-8452287:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8450458-8450587:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8450042-8450236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8449409-8449523:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8448668-8448791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8447966-8448117:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8447737-8447798:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8446652-8446761:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8445624-8445673:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8445439-8445538:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8445118-8445265:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8443411-8443538:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8441168-8441180:-1:exon

LOC108634087
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8453649..8455568
location: region:8453649-8455568:1
so has part: feature:8453649-8455568:1:exon
subclass of: SO_0000011

108634087
type: Gene
SIO_000068: ncbigene

position:8453649:1
position: 8453649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8455568:1
position: 8455568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8453649-8455568:1:exon

LOC108634087
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108634087
product: uncharacterized LOC108634087
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001917368.1
SIO_010081: LOC108634087
subclass of: SO_0000673
so part of: LOC108634087
location: join(8453649..8453943,8454294..8454411,8455018..8455568)
location: region:8453649-8455568:1
so has part: feature:8453649-8453943:1:exon
so has part: feature:8454294-8454411:1:exon
so has part: feature:8455018-8455568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8453649-8453943:1:exon

position:8453943:1
position: 8453943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8454294-8454411:1:exon

position:8454294:1
position: 8454294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8454411:1
position: 8454411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8455018-8455568:1:exon

position:8455018:1
position: 8455018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLAT
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: PLAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8543859..8567749
location: region:8543859-8567749:1
so has part: feature:8543859-8567749:1:exon
subclass of: SO_0000010

102187371
type: Gene
SIO_000068: ncbigene

position:8543859:1
position: 8543859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8567749:1
position: 8567749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8543859-8567749:1:exon

PLAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PLAT
product: plasminogen activator, tissue type, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 101 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_005698890.3
SIO_010081: PLAT
subclass of: SO_0000673
so part of: PLAT
location: join(8543859..8544020,8556459..8556553,8557654..8557696,8559216..8559353,8559591..8559701,8559969..8560143,8560963..8561054,8562385..8562565,8562906..8562991,8563440..8563635,8563729..8563865,8564000..8564140,8565220..8565386,8566916..8567749)
location: region:8543859-8567749:1
so has part: feature:8543859-8544020:1:exon
so has part: feature:8556459-8556553:1:exon
so has part: feature:8557654-8557696:1:exon
so has part: feature:8559216-8559353:1:exon
so has part: feature:8559591-8559701:1:exon
so has part: feature:8559969-8560143:1:exon
so has part: feature:8560963-8561054:1:exon
so has part: feature:8562385-8562565:1:exon
so has part: feature:8562906-8562991:1:exon
so has part: feature:8563440-8563635:1:exon
so has part: feature:8563729-8563865:1:exon
so has part: feature:8564000-8564140:1:exon
so has part: feature:8565220-8565386:1:exon
so has part: feature:8566916-8567749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8543859-8544020:1:exon

position:8544020:1
position: 8544020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8556459-8556553:1:exon

position:8556459:1
position: 8556459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8556553:1
position: 8556553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8557654-8557696:1:exon

position:8557654:1
position: 8557654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8557696:1
position: 8557696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8559216-8559353:1:exon

position:8559216:1
position: 8559216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8559353:1
position: 8559353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8559591-8559701:1:exon

position:8559591:1
position: 8559591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8559701:1
position: 8559701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8559969-8560143:1:exon

position:8559969:1
position: 8559969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8560143:1
position: 8560143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8560963-8561054:1:exon

position:8560963:1
position: 8560963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8561054:1
position: 8561054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8562385-8562565:1:exon

position:8562385:1
position: 8562385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8562565:1
position: 8562565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8562906-8562991:1:exon

position:8562906:1
position: 8562906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8562991:1
position: 8562991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8563440-8563635:1:exon

position:8563440:1
position: 8563440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8563635:1
position: 8563635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8563729-8563865:1:exon

position:8563729:1
position: 8563729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8563865:1
position: 8563865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8564000-8564140:1:exon

position:8564000:1
position: 8564000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8564140:1
position: 8564140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8565220-8565386:1:exon

position:8565220:1
position: 8565220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8565386:1
position: 8565386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8566916-8567749:1:exon

position:8566916:1
position: 8566916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PLAT
product: plasminogen activator, tissue type, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 74 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018042094.1
SIO_010081: PLAT
subclass of: SO_0000673
so part of: PLAT
location: join(8553884..8554871,8556459..8556553,8557654..8557696,8559216..8559353,8559591..8559701,8559969..8560143,8560963..8561054,8562385..8562565,8562906..8562991,8563440..8563635,8563729..8563865,8564000..8564140,8565220..8565386,8566916..8567749)
location: region:8553884-8567749:1
so has part: feature:8553884-8554871:1:exon
so has part: feature:8556459-8556553:1:exon
so has part: feature:8557654-8557696:1:exon
so has part: feature:8559216-8559353:1:exon
so has part: feature:8559591-8559701:1:exon
so has part: feature:8559969-8560143:1:exon
so has part: feature:8560963-8561054:1:exon
so has part: feature:8562385-8562565:1:exon
so has part: feature:8562906-8562991:1:exon
so has part: feature:8563440-8563635:1:exon
so has part: feature:8563729-8563865:1:exon
so has part: feature:8564000-8564140:1:exon
so has part: feature:8565220-8565386:1:exon
so has part: feature:8566916-8567749:1:exon

position:8553884:1
position: 8553884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8553884-8554871:1:exon

position:8554871:1
position: 8554871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8556459-8556553:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8557654-8557696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8559216-8559353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8559591-8559701:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8559969-8560143:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8560963-8561054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8562385-8562565:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8562906-8562991:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8563440-8563635:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8563729-8563865:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8564000-8564140:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8565220-8565386:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8566916-8567749:1:exon

PLAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PLAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tissue-type plasminogen activator
translation: MMNAVKTQFLCLLLCGAVFTWPSQETYRRLRRGARSNRVTCRDEKTQMTYLQHESWLRPLLRGNQVEHCRCNGGRAQCHSVPVRSCSEPWCFNGGTCQQALYSSEFVCQCPEGFMGKLCEIDATATCYKDQGVAYRGTWSTAESGAECASWNSSGLAMKPYSGRRPGAIRLGLGNHNYCRNPDQDSKPWCYVFKAGKYVSEFCSTPACTKAAEEDGDCYTGNGLAYRGTRSRTKSGASCLPWNSVFLTSKIYTAWKSNARALGLGKHNHCRNPDGDAQPWCHVWKDRQPTWEYCDVPQCVTCGLRQYKRPQFRIKGGLFADITSHPWQAAIFVKNRRSPGQRFLCGGILISSCWVLSAAHCFQERYPPHHLKVVLGRTYRLVPGEEEQMFEVEKYIVHKEFDDDTYDNDIALLHLKSDSLTCAQESGSVRTICLPDASLQLPDWTECELSGYGKHEASSPFFSERLKEAHVRLYPSSRCTSRHLFNRTVTNNMLCAGDTRSGGDHTNLHDACQGDSGGPLVCMKDNHMTLVGIISWGLGCGQKDIPGVYTKVTNYLDWIRDNMQP
SIO_010081: PLAT
subclass of: SO_0000673
so part of: PLAT
location: join(8556482..8556553,8557654..8557696,8559216..8559353,8559591..8559701,8559969..8560143,8560963..8561054,8562385..8562565,8562906..8562991,8563440..8563635,8563729..8563865,8564000..8564140,8565220..8565386,8566916..8567074)
location: region:8556482-8567074:1
so has part: feature:8556482-8556553:1:exon
so has part: feature:8557654-8557696:1:exon
so has part: feature:8559216-8559353:1:exon
so has part: feature:8559591-8559701:1:exon
so has part: feature:8559969-8560143:1:exon
so has part: feature:8560963-8561054:1:exon
so has part: feature:8562385-8562565:1:exon
so has part: feature:8562906-8562991:1:exon
so has part: feature:8563440-8563635:1:exon
so has part: feature:8563729-8563865:1:exon
so has part: feature:8564000-8564140:1:exon
so has part: feature:8565220-8565386:1:exon
so has part: feature:8566916-8567074:1:exon

XP_005698947.2
type: Protein
SIO_000068: ncbiprotein

position:8556482:1
position: 8556482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8567074:1
position: 8567074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8556482-8556553:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8557654-8557696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8559216-8559353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8559591-8559701:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8559969-8560143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8560963-8561054:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8562385-8562565:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8562906-8562991:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8563440-8563635:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8563729-8563865:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8564000-8564140:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8565220-8565386:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8566916-8567074:1:exon

PLAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PLAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tissue-type plasminogen activator
translation: MMNAVKTQFLCLLLCGAVFTWPSQETYRRLRRGARSNRVTCRDEKTQMTYLQHESWLRPLLRGNQVEHCRCNGGRAQCHSVPVRSCSEPWCFNGGTCQQALYSSEFVCQCPEGFMGKLCEIDATATCYKDQGVAYRGTWSTAESGAECASWNSSGLAMKPYSGRRPGAIRLGLGNHNYCRNPDQDSKPWCYVFKAGKYVSEFCSTPACTKAAEEDGDCYTGNGLAYRGTRSRTKSGASCLPWNSVFLTSKIYTAWKSNARALGLGKHNHCRNPDGDAQPWCHVWKDRQPTWEYCDVPQCVTCGLRQYKRPQFRIKGGLFADITSHPWQAAIFVKNRRSPGQRFLCGGILISSCWVLSAAHCFQERYPPHHLKVVLGRTYRLVPGEEEQMFEVEKYIVHKEFDDDTYDNDIALLHLKSDSLTCAQESGSVRTICLPDASLQLPDWTECELSGYGKHEASSPFFSERLKEAHVRLYPSSRCTSRHLFNRTVTNNMLCAGDTRSGGDHTNLHDACQGDSGGPLVCMKDNHMTLVGIISWGLGCGQKDIPGVYTKVTNYLDWIRDNMQP
SIO_010081: PLAT
subclass of: SO_0000673
so part of: PLAT
location: join(8556482..8556553,8557654..8557696,8559216..8559353,8559591..8559701,8559969..8560143,8560963..8561054,8562385..8562565,8562906..8562991,8563440..8563635,8563729..8563865,8564000..8564140,8565220..8565386,8566916..8567074)
location: region:8556482-8567074:1
so has part: feature:8556482-8556553:1:exon
so has part: feature:8557654-8557696:1:exon
so has part: feature:8559216-8559353:1:exon
so has part: feature:8559591-8559701:1:exon
so has part: feature:8559969-8560143:1:exon
so has part: feature:8560963-8561054:1:exon
so has part: feature:8562385-8562565:1:exon
so has part: feature:8562906-8562991:1:exon
so has part: feature:8563440-8563635:1:exon
so has part: feature:8563729-8563865:1:exon
so has part: feature:8564000-8564140:1:exon
so has part: feature:8565220-8565386:1:exon
so has part: feature:8566916-8567074:1:exon

XP_017897583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8556482-8556553:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8557654-8557696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8559216-8559353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8559591-8559701:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8559969-8560143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8560963-8561054:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8562385-8562565:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8562906-8562991:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8563440-8563635:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8563729-8563865:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8564000-8564140:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8565220-8565386:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8566916-8567074:1:exon

AP3M2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: AP3M2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8571034..8590180)
location: region:8571034-8590180:-1
so has part: feature:8571034-8590180:-1:exon
subclass of: SO_0000010

102187102
type: Gene
SIO_000068: ncbigene

position:8571034:-1
position: 8571034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8590180:-1
position: 8590180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8571034-8590180:-1:exon

AP3M2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: AP3M2
product: adaptor related protein complex 3 mu 2 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018042132.1
SIO_010081: AP3M2
subclass of: SO_0000673
so part of: AP3M2
location: complement(join(8571034..8573078,8574417..8574561,8574808..8575015,8576584..8576717,8576963..8577048,8581398..8581535,8582547..8582718,8588033..8588370,8590082..8590180))
location: region:8571034-8590180:-1
so has part: feature:8590082-8590180:-1:exon
so has part: feature:8588033-8588370:-1:exon
so has part: feature:8582547-8582718:-1:exon
so has part: feature:8581398-8581535:-1:exon
so has part: feature:8576963-8577048:-1:exon
so has part: feature:8576584-8576717:-1:exon
so has part: feature:8574808-8575015:-1:exon
so has part: feature:8574417-8574561:-1:exon
so has part: feature:8571034-8573078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8590082-8590180:-1:exon

position:8590082:-1
position: 8590082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8588033-8588370:-1:exon

position:8588033:-1
position: 8588033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8588370:-1
position: 8588370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8582547-8582718:-1:exon

position:8582547:-1
position: 8582547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8582718:-1
position: 8582718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8581398-8581535:-1:exon

position:8581398:-1
position: 8581398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8581535:-1
position: 8581535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8576963-8577048:-1:exon

position:8576963:-1
position: 8576963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8577048:-1
position: 8577048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8576584-8576717:-1:exon

position:8576584:-1
position: 8576584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8576717:-1
position: 8576717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8574808-8575015:-1:exon

position:8574808:-1
position: 8574808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8575015:-1
position: 8575015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8574417-8574561:-1:exon

position:8574417:-1
position: 8574417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8574561:-1
position: 8574561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8571034-8573078:-1:exon

position:8573078:-1
position: 8573078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP3M2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: AP3M2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-3 complex subunit mu-2
translation: MIHSLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIIDKSGSTITAEIQGVIDACVKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKHNISFRDSSSLGRFEITVGPKQTMGKTIEGVTVTSQMPRGVLNMSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT
SIO_010081: AP3M2
subclass of: SO_0000673
so part of: AP3M2
location: complement(join(8572978..8573078,8574417..8574561,8574808..8575015,8576584..8576717,8576963..8577048,8581398..8581535,8582547..8582718,8588033..8588305))
location: region:8572978-8588305:-1
so has part: feature:8588033-8588305:-1:exon
so has part: feature:8582547-8582718:-1:exon
so has part: feature:8581398-8581535:-1:exon
so has part: feature:8576963-8577048:-1:exon
so has part: feature:8576584-8576717:-1:exon
so has part: feature:8574808-8575015:-1:exon
so has part: feature:8574417-8574561:-1:exon
so has part: feature:8572978-8573078:-1:exon

XP_017897621.1
type: Protein
SIO_000068: ncbiprotein

position:8572978:-1
position: 8572978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8588305:-1
position: 8588305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8588033-8588305:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8582547-8582718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8581398-8581535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8576963-8577048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8576584-8576717:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8574808-8575015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8574417-8574561:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8572978-8573078:-1:exon

KAT6A
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: KAT6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8662278..8768939
location: region:8662278-8768939:1
so has part: feature:8662278-8768939:1:exon
subclass of: SO_0000010

102176852
type: Gene
SIO_000068: ncbigene

position:8662278:1
position: 8662278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8768939:1
position: 8768939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8662278-8768939:1:exon

KAT6A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: KAT6A
product: lysine acetyltransferase 6A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 40 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018041955.1
SIO_010081: KAT6A
subclass of: SO_0000673
so part of: KAT6A
location: join(8662278..8662403,8664873..8665785,8715056..8715164,8717753..8717868,8718645..8718726,8719667..8719802,8721130..8721446,8723932..8724050,8743170..8743285,8750357..8750498,8752103..8752264,8753294..8753387,8755224..8755455,8756146..8756395,8757756..8758388,8761266..8761578,8763541..8768939)
location: region:8662278-8768939:1
so has part: feature:8662278-8662403:1:exon
so has part: feature:8664873-8665785:1:exon
so has part: feature:8715056-8715164:1:exon
so has part: feature:8717753-8717868:1:exon
so has part: feature:8718645-8718726:1:exon
so has part: feature:8719667-8719802:1:exon
so has part: feature:8721130-8721446:1:exon
so has part: feature:8723932-8724050:1:exon
so has part: feature:8743170-8743285:1:exon
so has part: feature:8750357-8750498:1:exon
so has part: feature:8752103-8752264:1:exon
so has part: feature:8753294-8753387:1:exon
so has part: feature:8755224-8755455:1:exon
so has part: feature:8756146-8756395:1:exon
so has part: feature:8757756-8758388:1:exon
so has part: feature:8761266-8761578:1:exon
so has part: feature:8763541-8768939:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8662278-8662403:1:exon

position:8662403:1
position: 8662403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8664873-8665785:1:exon

position:8664873:1
position: 8664873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8665785:1
position: 8665785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8715056-8715164:1:exon

position:8715056:1
position: 8715056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8715164:1
position: 8715164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8717753-8717868:1:exon

position:8717753:1
position: 8717753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8717868:1
position: 8717868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8718645-8718726:1:exon

position:8718645:1
position: 8718645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8718726:1
position: 8718726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8719667-8719802:1:exon

position:8719667:1
position: 8719667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8719802:1
position: 8719802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8721130-8721446:1:exon

position:8721130:1
position: 8721130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8721446:1
position: 8721446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8723932-8724050:1:exon

position:8723932:1
position: 8723932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8724050:1
position: 8724050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8743170-8743285:1:exon

position:8743170:1
position: 8743170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8743285:1
position: 8743285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8750357-8750498:1:exon

position:8750357:1
position: 8750357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8750498:1
position: 8750498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8752103-8752264:1:exon

position:8752103:1
position: 8752103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8752264:1
position: 8752264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8753294-8753387:1:exon

position:8753294:1
position: 8753294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8753387:1
position: 8753387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8755224-8755455:1:exon

position:8755224:1
position: 8755224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8755455:1
position: 8755455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8756146-8756395:1:exon

position:8756146:1
position: 8756146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8756395:1
position: 8756395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8757756-8758388:1:exon

position:8757756:1
position: 8757756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8758388:1
position: 8758388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8761266-8761578:1:exon

position:8761266:1
position: 8761266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8761578:1
position: 8761578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8763541-8768939:1:exon

position:8763541:1
position: 8763541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KAT6A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: KAT6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase KAT6A isoform X1
translation: MVKLANPLYTEWILEAIKKVKKQKQRPSEERICNAVSSSHGLDRKTVLEQLELSVKDGTILKVSNKGLNSYKDPDNPGRIALPKPRNHGKLDNKQNVDWNKLIKRAVEGLAESGGSTLKSIERFLKGQKDVSALFGGGAASGLHQQLRLAIKRAVGHGRLLKDGPLYRLNTKATNVDGKESSESLSSLPPVSLLPHEKDKPVAEPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKKAAQIKRRYANPIGRPKNRLKKQTTVSKGPFSKVRTGPGRGRKRKITLSSQSASSSEEGYLEQIDGLDFCRDGSVPLKFNKKTKGLIDGLTKFFTPSPDGRKPRGEVVDYSEQYRARKKGSRKPSTSDWPTDNQDGWDGKQESEDRLFGSQEIMTEKDMELFRDIQEQALQKVGVTGPPDPQVRCPSVIEFGKYEIHTWYSSPYPQEYSRLPKLYLCEFCLKYMKSRAILQQHMKKCGWFHPPANEIYRKNNISVFEVDGNVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDVKGCHLVGYFSKEKHCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQAGSPEKPLSDLGRLSYMAYWKSVILECLYHQNDKQISIKKLSKLTGICPQDITSTLHHLRMLDFRSDQFVIIRREKLIQDHMAKLQLNLRPVDVDPECLRWTPVIVSNSVVSEEEEEEEEEEEEEEEEEEEEEEEREPEERQSQERELEPNVGKSASRENKEQDSYTSVESEKKPEVTTPASTTRLSKQVLPRDSLPANSQPSRRGRWGRKNRKAQERFGDKDPKLLLEETPAPQEQYGDCEEKSEPSQEQFVESEEPAAASQEQPSQDGKPDGPKRRPGEGLELWRGPPKKSPEPLKCGLPDAHDRLPRRYSEGRYCEGRYADGDRPALRGCSESSEEDGEPESPRSSSPPVLTKPTLKRKKPILHRRRRVRKRKHHNSSVVTETISETTEVLDEPFEDSDSERPMPRLEPTFEIDEEEEEEDESELFSRGYFHRLASQDVLRCRSDSKRKSKDEDDDEESDDADDTPVLKPVSLLRKCDVKDAALEPDTSTPMKKKKGWPKGKSRKPVHWKKRAGRKPGFKLSREMVPLSAQECVVEPIVPLPKAGRKSKMEENEETVEPKDDLPLTEERKEEEELPLEAEEVEEGEEEDTTSSDVRAASPADASSPEAEAKEPEAGEEEEKPRVPAEQRPSEEAPQELARREPEEEEDTAAETNQSEDHDADDEDDGHLEPAKKEEEPGDPPAREGVKEEPGGREAFLDPNVQGSGENPKDKEEMEPDSEEEQTSHEASVVSEHMPGSEDDREEDSRSKEELLELKEEEEIPHSELDLETVQAVQSLTQEERGEHEGAYQDCEETLAACQTLQSYTQADEDPPLALVEDCHASEHNSPLSSVQSHPSQSVRSVSSPSVPALEGGYTQISPEQGSLSAPSMQNMETSPMMDVPSVSDHSQQVVDSGFSDLGSIESTTENYENPSSYDSTMGGSICGNSSSQSSCSYGLSSSSSLTQNSCVVTQQMAGMGGGCSLMPQSSVPPAANCGIKSPQSCAVERPPSTQQPPPPQPSQQPPPQPQPPAPPPPPAQPPPPPPPPPQQPQPPPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGSAGNISIYERIPGDFGAGSYSQPSATFSLAKLQQLTNTIMDPHAMPYSHSPAVTSYATSVSLSNTGLAQLAPSHPLAGTPQAQATMTPPPNLASTTMNLTSPLLQCNMSATNIGIPHTQRLQGQMPVKGHISIRSKSAPLPSAAAHQQQLYGRSPPAVAMQAGPRALAVQRGMNMGVNLMPTPAYNVNSMNMNTLNAMNSYRMTQPMMNSSYHSNPAYMNQTAQYPMQMQMGVMGGQAYPQQPMQPSPHGNVMYTGPSH…
SIO_010081: KAT6A
subclass of: SO_0000673
so part of: KAT6A
location: join(8665186..8665785,8715056..8715164,8717753..8717868,8718645..8718726,8719667..8719802,8721130..8721446,8723932..8724050,8743170..8743285,8750357..8750498,8752103..8752264,8753294..8753387,8755224..8755455,8756146..8756395,8757756..8758388,8761266..8761578,8763541..8766185)
location: region:8665186-8766185:1
so has part: feature:8665186-8665785:1:exon
so has part: feature:8715056-8715164:1:exon
so has part: feature:8717753-8717868:1:exon
so has part: feature:8718645-8718726:1:exon
so has part: feature:8719667-8719802:1:exon
so has part: feature:8721130-8721446:1:exon
so has part: feature:8723932-8724050:1:exon
so has part: feature:8743170-8743285:1:exon
so has part: feature:8750357-8750498:1:exon
so has part: feature:8752103-8752264:1:exon
so has part: feature:8753294-8753387:1:exon
so has part: feature:8755224-8755455:1:exon
so has part: feature:8756146-8756395:1:exon
so has part: feature:8757756-8758388:1:exon
so has part: feature:8761266-8761578:1:exon
so has part: feature:8763541-8766185:1:exon

XP_017897444.1
type: Protein
SIO_000068: ncbiprotein

position:8665186:1
position: 8665186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8766185:1
position: 8766185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8665186-8665785:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8715056-8715164:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8717753-8717868:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8718645-8718726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8719667-8719802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8721130-8721446:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8723932-8724050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8743170-8743285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8750357-8750498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8752103-8752264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8753294-8753387:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8755224-8755455:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8756146-8756395:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8757756-8758388:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8761266-8761578:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8763541-8766185:1:exon

KAT6A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: KAT6A
product: lysine acetyltransferase 6A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 39 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041956.1
SIO_010081: KAT6A
subclass of: SO_0000673
so part of: KAT6A
location: join(8679957..8680136,8715056..8715164,8717753..8717868,8718645..8718726,8719667..8719802,8721130..8721446,8723932..8724050,8743170..8743285,8750357..8750498,8752103..8752264,8753294..8753387,8755224..8755455,8756146..8756395,8757756..8758388,8761266..8761578,8763541..8768939)
location: region:8679957-8768939:1
so has part: feature:8679957-8680136:1:exon
so has part: feature:8715056-8715164:1:exon
so has part: feature:8717753-8717868:1:exon
so has part: feature:8718645-8718726:1:exon
so has part: feature:8719667-8719802:1:exon
so has part: feature:8721130-8721446:1:exon
so has part: feature:8723932-8724050:1:exon
so has part: feature:8743170-8743285:1:exon
so has part: feature:8750357-8750498:1:exon
so has part: feature:8752103-8752264:1:exon
so has part: feature:8753294-8753387:1:exon
so has part: feature:8755224-8755455:1:exon
so has part: feature:8756146-8756395:1:exon
so has part: feature:8757756-8758388:1:exon
so has part: feature:8761266-8761578:1:exon
so has part: feature:8763541-8768939:1:exon

position:8679957:1
position: 8679957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8679957-8680136:1:exon

position:8680136:1
position: 8680136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8715056-8715164:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8717753-8717868:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8718645-8718726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8719667-8719802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8721130-8721446:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8723932-8724050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8743170-8743285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8750357-8750498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8752103-8752264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8753294-8753387:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8755224-8755455:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8756146-8756395:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8757756-8758388:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8761266-8761578:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8763541-8768939:1:exon

KAT6A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: KAT6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase KAT6A isoform X2
translation: MTVAAVGAPVAQLCTGPFYPCCCLPGFLLLSLTPRFKGISPWCYPVAEPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKKAAQIKRRYANPIGRPKNRLKKQTTVSKGPFSKVRTGPGRGRKRKITLSSQSASSSEEGYLEQIDGLDFCRDGSVPLKFNKKTKGLIDGLTKFFTPSPDGRKPRGEVVDYSEQYRARKKGSRKPSTSDWPTDNQDGWDGKQESEDRLFGSQEIMTEKDMELFRDIQEQALQKVGVTGPPDPQVRCPSVIEFGKYEIHTWYSSPYPQEYSRLPKLYLCEFCLKYMKSRAILQQHMKKCGWFHPPANEIYRKNNISVFEVDGNVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDVKGCHLVGYFSKEKHCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQAGSPEKPLSDLGRLSYMAYWKSVILECLYHQNDKQISIKKLSKLTGICPQDITSTLHHLRMLDFRSDQFVIIRREKLIQDHMAKLQLNLRPVDVDPECLRWTPVIVSNSVVSEEEEEEEEEEEEEEEEEEEEEEEREPEERQSQERELEPNVGKSASRENKEQDSYTSVESEKKPEVTTPASTTRLSKQVLPRDSLPANSQPSRRGRWGRKNRKAQERFGDKDPKLLLEETPAPQEQYGDCEEKSEPSQEQFVESEEPAAASQEQPSQDGKPDGPKRRPGEGLELWRGPPKKSPEPLKCGLPDAHDRLPRRYSEGRYCEGRYADGDRPALRGCSESSEEDGEPESPRSSSPPVLTKPTLKRKKPILHRRRRVRKRKHHNSSVVTETISETTEVLDEPFEDSDSERPMPRLEPTFEIDEEEEEEDESELFSRGYFHRLASQDVLRCRSDSKRKSKDEDDDEESDDADDTPVLKPVSLLRKCDVKDAALEPDTSTPMKKKKGWPKGKSRKPVHWKKRAGRKPGFKLSREMVPLSAQECVVEPIVPLPKAGRKSKMEENEETVEPKDDLPLTEERKEEEELPLEAEEVEEGEEEDTTSSDVRAASPADASSPEAEAKEPEAGEEEEKPRVPAEQRPSEEAPQELARREPEEEEDTAAETNQSEDHDADDEDDGHLEPAKKEEEPGDPPAREGVKEEPGGREAFLDPNVQGSGENPKDKEEMEPDSEEEQTSHEASVVSEHMPGSEDDREEDSRSKEELLELKEEEEIPHSELDLETVQAVQSLTQEERGEHEGAYQDCEETLAACQTLQSYTQADEDPPLALVEDCHASEHNSPLSSVQSHPSQSVRSVSSPSVPALEGGYTQISPEQGSLSAPSMQNMETSPMMDVPSVSDHSQQVVDSGFSDLGSIESTTENYENPSSYDSTMGGSICGNSSSQSSCSYGLSSSSSLTQNSCVVTQQMAGMGGGCSLMPQSSVPPAANCGIKSPQSCAVERPPSTQQPPPPQPSQQPPPQPQPPAPPPPPAQPPPPPPPPPQQPQPPPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGSAGNISIYERIPGDFGAGSYSQPSATFSLAKLQQLTNTIMDPHAMPYSHSPAVTSYATSVSLSNTGLAQLAPSHPLAGTPQAQATMTPPPNLASTTMNLTSPLLQCNMSATNIGIPHTQRLQGQMPVKGHISIRSKSAPLPSAAAHQQQLYGRSPPAVAMQAGPRALAVQRGMNMGVNLMPTPAYNVNSMNMNTLNAMNSYRMTQPMMNSSYHSNPAYMNQTAQYPMQMQMGVMGGQAYPQQPMQPSPHGNVMYTGPSHHSYMNAAGVPKQSLNGPYMRR
SIO_010081: KAT6A
subclass of: SO_0000673
so part of: KAT6A
location: join(8680005..8680136,8715056..8715164,8717753..8717868,8718645..8718726,8719667..8719802,8721130..8721446,8723932..8724050,8743170..8743285,8750357..8750498,8752103..8752264,8753294..8753387,8755224..8755455,8756146..8756395,8757756..8758388,8761266..8761578,8763541..8766185)
location: region:8680005-8766185:1
so has part: feature:8680005-8680136:1:exon
so has part: feature:8715056-8715164:1:exon
so has part: feature:8717753-8717868:1:exon
so has part: feature:8718645-8718726:1:exon
so has part: feature:8719667-8719802:1:exon
so has part: feature:8721130-8721446:1:exon
so has part: feature:8723932-8724050:1:exon
so has part: feature:8743170-8743285:1:exon
so has part: feature:8750357-8750498:1:exon
so has part: feature:8752103-8752264:1:exon
so has part: feature:8753294-8753387:1:exon
so has part: feature:8755224-8755455:1:exon
so has part: feature:8756146-8756395:1:exon
so has part: feature:8757756-8758388:1:exon
so has part: feature:8761266-8761578:1:exon
so has part: feature:8763541-8766185:1:exon

XP_017897445.1
type: Protein
SIO_000068: ncbiprotein

position:8680005:1
position: 8680005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8680005-8680136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8715056-8715164:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8717753-8717868:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8718645-8718726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8719667-8719802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8721130-8721446:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8723932-8724050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8743170-8743285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8750357-8750498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8752103-8752264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8753294-8753387:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8755224-8755455:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8756146-8756395:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8757756-8758388:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8761266-8761578:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8763541-8766185:1:exon

ANK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8803870..9045163
location: region:8803870-9045163:1
so has part: feature:8803870-9045163:1:exon
subclass of: SO_0000010

102186831
type: Gene
SIO_000068: ncbigene

position:8803870:1
position: 8803870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9045163:1
position: 9045163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8803870-9045163:1:exon

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ANK1
product: ankyrin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041977.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(8803870..8804118,8941583..8941684,8964257..8964355,8969617..8969715,8970243..8970341,8971233..8971418,8972436..8972534,8972979..8973077,8973340..8973438,8974393..8974590,8976564..8976662,8977081..8977179,8977631..8977729,8979929..8980126,8980529..8980627,8981777..8981875,8985015..8985212,8987892..8987990,8990206..8990304,8991033..8991131,8992172..8992264,8992706..8992778,8993538..8993561,8994832..8994925,8996343..8996421,8998462..8998559,8998645..8998869,8999990..9000144,9000430..9000641,9001146..9001350,9001640..9001736,9002000..9002228,9003876..9004001,9004352..9004471,9005698..9005776,9006009..9006083,9009777..9009908,9011942..9012088,9027194..9027752,9030795..9031032,9036253..9036336,9037238..9037378,9044418..9045163)
location: region:8803870-9045163:1
so has part: feature:8803870-8804118:1:exon
so has part: feature:8941583-8941684:1:exon
so has part: feature:8964257-8964355:1:exon
so has part: feature:8969617-8969715:1:exon
so has part: feature:8970243-8970341:1:exon
so has part: feature:8971233-8971418:1:exon
so has part: feature:8972436-8972534:1:exon
so has part: feature:8972979-8973077:1:exon
so has part: feature:8973340-8973438:1:exon
so has part: feature:8974393-8974590:1:exon
so has part: feature:8976564-8976662:1:exon
so has part: feature:8977081-8977179:1:exon
so has part: feature:8977631-8977729:1:exon
so has part: feature:8979929-8980126:1:exon
so has part: feature:8980529-8980627:1:exon
so has part: feature:8981777-8981875:1:exon
so has part: feature:8985015-8985212:1:exon
so has part: feature:8987892-8987990:1:exon
so has part: feature:8990206-8990304:1:exon
so has part: feature:8991033-8991131:1:exon
so has part: feature:8992172-8992264:1:exon
so has part: feature:8992706-8992778:1:exon
so has part: feature:8993538-8993561:1:exon
so has part: feature:8994832-8994925:1:exon
so has part: feature:8996343-8996421:1:exon
so has part: feature:8998462-8998559:1:exon
so has part: feature:8998645-8998869:1:exon
so has part: feature:8999990-9000144:1:exon
so has part: feature:9000430-9000641:1:exon
so has part: feature:9001146-9001350:1:exon
so has part: feature:9001640-9001736:1:exon
so has part: feature:9002000-9002228:1:exon
so has part: feature:9003876-9004001:1:exon
so has part: feature:9004352-9004471:1:exon
so has part: feature:9005698-9005776:1:exon
so has part: feature:9006009-9006083:1:exon
so has part: feature:9009777-9009908:1:exon
so has part: feature:9011942-9012088:1:exon
so has part: feature:9027194-9027752:1:exon
so has part: feature:9030795-9031032:1:exon
so has part: feature:9036253-9036336:1:exon
so has part: feature:9037238-9037378:1:exon
so has part: feature:9044418-9045163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8803870-8804118:1:exon

position:8804118:1
position: 8804118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8941583-8941684:1:exon

position:8941583:1
position: 8941583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8941684:1
position: 8941684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8964257-8964355:1:exon

position:8964257:1
position: 8964257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8964355:1
position: 8964355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8969617-8969715:1:exon

position:8969617:1
position: 8969617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8969715:1
position: 8969715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8970243-8970341:1:exon

position:8970243:1
position: 8970243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8970341:1
position: 8970341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8971233-8971418:1:exon

position:8971233:1
position: 8971233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8971418:1
position: 8971418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8972436-8972534:1:exon

position:8972436:1
position: 8972436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8972534:1
position: 8972534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8972979-8973077:1:exon

position:8972979:1
position: 8972979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8973077:1
position: 8973077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8973340-8973438:1:exon

position:8973340:1
position: 8973340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8973438:1
position: 8973438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8974393-8974590:1:exon

position:8974393:1
position: 8974393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8974590:1
position: 8974590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8976564-8976662:1:exon

position:8976564:1
position: 8976564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8976662:1
position: 8976662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8977081-8977179:1:exon

position:8977081:1
position: 8977081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8977179:1
position: 8977179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8977631-8977729:1:exon

position:8977631:1
position: 8977631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8977729:1
position: 8977729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8979929-8980126:1:exon

position:8979929:1
position: 8979929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8980126:1
position: 8980126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8980529-8980627:1:exon

position:8980529:1
position: 8980529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8980627:1
position: 8980627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8981777-8981875:1:exon

position:8981777:1
position: 8981777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8981875:1
position: 8981875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8985015-8985212:1:exon

position:8985015:1
position: 8985015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8985212:1
position: 8985212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8987892-8987990:1:exon

position:8987892:1
position: 8987892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8987990:1
position: 8987990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8990206-8990304:1:exon

position:8990206:1
position: 8990206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8990304:1
position: 8990304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8991033-8991131:1:exon

position:8991033:1
position: 8991033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8991131:1
position: 8991131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8992172-8992264:1:exon

position:8992172:1
position: 8992172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8992264:1
position: 8992264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:8992706-8992778:1:exon

position:8992706:1
position: 8992706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8992778:1
position: 8992778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:8993538-8993561:1:exon

position:8993538:1
position: 8993538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8993561:1
position: 8993561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:8994832-8994925:1:exon

position:8994832:1
position: 8994832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8994925:1
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urn:…
SIO_000300: 25
SIO_000628: feature:8996343-8996421:1:exon

position:8996343:1
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position:8996421:1
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urn:…
SIO_000300: 26
SIO_000628: feature:8998462-8998559:1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:8998645-8998869:1:exon

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urn:…
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SIO_000628: feature:8999990-9000144:1:exon

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urn:…
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urn:…
SIO_000300: 31
SIO_000628: feature:9001640-9001736:1:exon

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urn:…
SIO_000300: 32
SIO_000628: feature:9002000-9002228:1:exon

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urn:…
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urn:…
SIO_000300: 36
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urn:…
SIO_000300: 38
SIO_000628: feature:9011942-9012088:1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:9027194-9027752:1:exon

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urn:…
SIO_000300: 40
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urn:…
SIO_000300: 41
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SIO_000300: 42
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urn:…
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ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ANK1
product: ankyrin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041976.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
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so has part: feature:9044418-9045163:1:exon

position:8803875:1
position: 8803875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8803875-8804118:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8941583-8941684:1:exon

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SIO_000628: feature:8972979-8973077:1:exon

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SIO_000628: feature:8973340-8973438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8974393-8974590:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8976564-8976662:1:exon

urn:…
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SIO_000628: feature:8977081-8977179:1:exon

urn:…
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SIO_000628: feature:8977631-8977729:1:exon

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urn:…
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SIO_000628: feature:8980529-8980627:1:exon

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SIO_000628: feature:9000430-9000641:1:exon

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SIO_000628: feature:9001146-9001350:1:exon

urn:…
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SIO_000628: feature:9001640-9001736:1:exon

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urn:…
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SIO_000628: feature:9003876-9004001:1:exon

urn:…
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SIO_000628: feature:9004352-9004471:1:exon

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SIO_000628: feature:9005698-9005776:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:9006009-9006083:1:exon

urn:…
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SIO_000628: feature:9009777-9009908:1:exon

urn:…
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SIO_000628: feature:9011942-9012088:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:9027194-9027752:1:exon

urn:…
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urn:…
SIO_000300: 41
SIO_000628: feature:9036253-9036336:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:9037238-9037378:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:9037621-9037754:1:exon

position:9037621:1
position: 9037621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9037754:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:9044418-9045163:1:exon

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ANK1
product: ankyrin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041978.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(8803876..8804118,8941583..8941684,8964257..8964355,8969617..8969715,8970243..8970341,8971233..8971418,8972436..8972534,8972979..8973077,8973340..8973438,8974393..8974590,8976564..8976662,8977081..8977179,8977631..8977729,8979929..8980126,8980529..8980627,8981777..8981875,8985015..8985212,8987892..8987990,8990206..8990304,8991033..8991131,8992172..8992264,8992706..8992778,8993538..8993561,8994832..8994925,8996343..8996421,8998462..8998559,8998645..8998869,8999990..9000144,9000430..9000641,9001146..9001350,9001640..9001736,9002000..9002228,9003876..9004001,9004352..9004471,9005698..9005776,9006009..9006083,9009777..9009908,9011942..9012088,9027194..9027752,9030795..9031032,9036253..9036336,9037238..9037303,9037621..9037754,9044418..9045163)
location: region:8803876-9045163:1
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position:8803876:1
position: 8803876
reference: sequence
type: ForwardStrandPosition
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:9037238-9037303:1:exon

position:9037303:1
position: 9037303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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SIO_000628: feature:9037621-9037754:1:exon

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SIO_000300: 44
SIO_000628: feature:9044418-9045163:1:exon

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ANK1
product: ankyrin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041979.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(8803876..8804118,8941583..8941684,8964257..8964355,8969617..8969715,8970243..8970341,8971233..8971418,8972436..8972534,8972979..8973077,8973340..8973438,8974393..8974590,8976564..8976662,8977081..8977179,8977631..8977729,8979929..8980126,8980529..8980627,8981777..8981875,8985015..8985212,8987892..8987990,8990206..8990304,8991033..8991131,8992172..8992264,8992706..8992778,8993538..8993561,8994832..8994925,8996343..8996421,8998462..8998559,8998645..8998869,8999990..9000144,9000430..9000641,9001146..9001350,9001640..9001736,9002000..9002228,9003876..9004001,9004352..9004471,9005698..9005776,9006009..9006083,9009777..9009908,9011942..9012088,9027680..9027752,9030795..9031032,9036253..9036336,9037238..9037378,9037621..9037754,9044418..9045163)
location: region:8803876-9045163:1
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