Capra hircus breed San Clemente chromosome 26, ASM170441v1, whole genome shotgun sequence.
type: Entry
definition: Capra hircus breed San Clemente chromosome 26, ASM170441v1, whole genome shotgun sequence.
sequence version: NC_030833.1
sequence date: 2016-09-08
sequence: sequence
division: CON
label: NC_030833.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA340281
dblink: SAMN03863711
keyword: WGS
keyword: RefSeq
source: Capra hircus (goat)
organism: Capra hircus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra.
reference: 1
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM004587.1.\nAssembly name: ASM170441v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the USDA ARS on 2016/08/24. The\noriginal whole-genome shotgun project has the accession\nLWLT00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: USDA ARS\nAssembly Date :: MAR-2016\nAssembly Method :: Celera Assembler v. 8.2; BioNano Genomics\n Irys v. APRIL-2015; Lachesis Hi-C v.\n JUNE-2015\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Capra hircus Annotation Release 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 51421553
topology: linear
so has quality: SO_0000987
location: 1..51421553
location: region:1-51421553:1
RO_0002162: 9925

NC_030833
type: RefSeq
SIO_000068: refseq

PRJNA340281
type: BioProject
SIO_000068: bioproject

SAMN03863711
type: BioSample
SIO_000068: biosample

1
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51421553:1
position: 51421553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-51421553:1:source
so part of: sequence
organism: Capra hircus
mol type: genomic DNA
chromosome: 26
sex: male
tissue type: blood
dev stage: adult
breed: San Clemente

9925
type: Taxonomy
SIO_000068: taxonomy

SYCE1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SYCE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11105..23044
location: region:11105-23044:1
so has part: feature:11105-23044:1:exon
subclass of: SO_0000010

102182778
type: Gene
SIO_000068: ncbigene

position:11105:1
position: 11105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23044:1
position: 23044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11105-23044:1:exon

SYCE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SYCE1
product: synaptonemal complex central element protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018041130.1
SIO_010081: SYCE1
subclass of: SO_0000673
so part of: SYCE1
location: join(11105..11206,18076..18138,18778..18837,19145..19219,19843..19890,20137..20191,20845..20934,21178..21241,21990..22056,22134..22254,22325..22435,22586..22673,22899..23044)
location: region:11105-23044:1
so has part: feature:11105-11206:1:exon
so has part: feature:18076-18138:1:exon
so has part: feature:18778-18837:1:exon
so has part: feature:19145-19219:1:exon
so has part: feature:19843-19890:1:exon
so has part: feature:20137-20191:1:exon
so has part: feature:20845-20934:1:exon
so has part: feature:21178-21241:1:exon
so has part: feature:21990-22056:1:exon
so has part: feature:22134-22254:1:exon
so has part: feature:22325-22435:1:exon
so has part: feature:22586-22673:1:exon
so has part: feature:22899-23044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11105-11206:1:exon

position:11206:1
position: 11206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18076-18138:1:exon

position:18076:1
position: 18076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18138:1
position: 18138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18778-18837:1:exon

position:18778:1
position: 18778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18837:1
position: 18837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19145-19219:1:exon

position:19145:1
position: 19145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19219:1
position: 19219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:19843-19890:1:exon

position:19843:1
position: 19843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19890:1
position: 19890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:20137-20191:1:exon

position:20137:1
position: 20137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20191:1
position: 20191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:20845-20934:1:exon

position:20845:1
position: 20845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20934:1
position: 20934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:21178-21241:1:exon

position:21178:1
position: 21178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21241:1
position: 21241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:21990-22056:1:exon

position:21990:1
position: 21990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22056:1
position: 22056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:22134-22254:1:exon

position:22134:1
position: 22134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22254:1
position: 22254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:22325-22435:1:exon

position:22325:1
position: 22325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22435:1
position: 22435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:22586-22673:1:exon

position:22586:1
position: 22586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22673:1
position: 22673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:22899-23044:1:exon

position:22899:1
position: 22899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYCE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SYCE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex central element protein 1
translation: MAGRPGSSNAEAAGAVGPTDEARGQAKSSQKIEDLMEMVKKLQKVGSLEPRVEVLINRINEVQQAKKKASEELGDARAVWETLQKELDSLSGEKVRLKEILSKKQETLRVLRLHCQDKESEAQRKQTMLQECKERISALDSQIEQEKNKQRQLRLDFEEKLEDLMGQYKDLWEFHKPERLALEIGTLDSSKEQLLKEEKLVEAKLEDVRHRLRSQFGAEGHTISEGLFLRSPEAAAVVHLFEEENRKAQELLEAAAQRQEQLQQKCQQLQQKRQRLKEELEKLGIQVPAQAQSKQEEEAGLGEAANPKPLGVSEEKDPEPSTK
SIO_010081: SYCE1
subclass of: SO_0000673
so part of: SYCE1
location: join(11137..11206,18076..18138,18778..18837,19145..19219,19843..19890,20137..20191,20845..20934,21178..21241,21990..22056,22134..22254,22325..22435,22586..22673,22899..22958)
location: region:11137-22958:1
so has part: feature:11137-11206:1:exon
so has part: feature:18076-18138:1:exon
so has part: feature:18778-18837:1:exon
so has part: feature:19145-19219:1:exon
so has part: feature:19843-19890:1:exon
so has part: feature:20137-20191:1:exon
so has part: feature:20845-20934:1:exon
so has part: feature:21178-21241:1:exon
so has part: feature:21990-22056:1:exon
so has part: feature:22134-22254:1:exon
so has part: feature:22325-22435:1:exon
so has part: feature:22586-22673:1:exon
so has part: feature:22899-22958:1:exon

XP_017896619.1
type: Protein
SIO_000068: ncbiprotein

position:11137:1
position: 11137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22958:1
position: 22958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11137-11206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18076-18138:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18778-18837:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19145-19219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19843-19890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20137-20191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20845-20934:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21178-21241:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21990-22056:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22134-22254:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22325-22435:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22586-22673:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22899-22958:1:exon

LOC102182294
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102182294
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(41900..52649)
location: region:41900-52649:-1
so has part: feature:41900-52649:-1:exon
subclass of: SO_0000010

102182294
type: Gene
SIO_000068: ncbigene

position:41900:-1
position: 41900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52649:-1
position: 52649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41900-52649:-1:exon

LOC102182294
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102182294
product: cytochrome P450 2E1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 150 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005701375.3
SIO_010081: LOC102182294
subclass of: SO_0000673
so part of: LOC102182294
location: complement(join(41900..42472,43142..43283,43753..43940,45936..46077,47079..47255,47705..47865,48146..48295,51345..51504,52432..52649))
location: region:41900-52649:-1
so has part: feature:52432-52649:-1:exon
so has part: feature:51345-51504:-1:exon
so has part: feature:48146-48295:-1:exon
so has part: feature:47705-47865:-1:exon
so has part: feature:47079-47255:-1:exon
so has part: feature:45936-46077:-1:exon
so has part: feature:43753-43940:-1:exon
so has part: feature:43142-43283:-1:exon
so has part: feature:41900-42472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52432-52649:-1:exon

position:52432:-1
position: 52432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:51345-51504:-1:exon

position:51345:-1
position: 51345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51504:-1
position: 51504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48146-48295:-1:exon

position:48146:-1
position: 48146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48295:-1
position: 48295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:47705-47865:-1:exon

position:47705:-1
position: 47705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47865:-1
position: 47865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:47079-47255:-1:exon

position:47079:-1
position: 47079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47255:-1
position: 47255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:45936-46077:-1:exon

position:45936:-1
position: 45936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46077:-1
position: 46077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:43753-43940:-1:exon

position:43753:-1
position: 43753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43940:-1
position: 43940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:43142-43283:-1:exon

position:43142:-1
position: 43142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43283:-1
position: 43283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:41900-42472:-1:exon

position:42472:-1
position: 42472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102182294
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102182294
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 2E1
translation: MAALGITVALLVWMATLLLISIWKHIYSSWKLPPGPFPLPIIGNLLQLDIKNIPKSFTRLAERFGPVFTLYLGSRRVVVVHGYKPVKEVLLDYKNEFSGRGENPGFQVHKNNGIIFNNGPTWRDTRRFSLTILRDLGMGKQGNEQRIQREAHFLLDVLRKTQGQPFDPTFVIGFAPYNVISDILFHKRFDYKDKMGLRLMSLFNENFYLLSTPWIQLYNNFSDYLQYLPGSHRKLLKNVSEVKDYALERTKAHQKSLEPSCPRGFLDTMLIEMAKEKHSADPMYTLENIAVTVADLLFAGTETTSTTLRYGLLILMKYPEVEEKLHEEIDRVIGPSRIPAIKDRLDMPYLDAVVHEIQRFIDLIPSNLLHEATQDTVFRGYVIPKGTLIIPTLDSVLYDRQEFPEPEEFKPEHFLNESGKFKYSDHFKAFSAGKRVCVGEGLARMELFLFLAAILQHFNLKSLVDPKDIDLSPIAIGFGKIPPRYKLCLIPRSEV
SIO_010081: LOC102182294
subclass of: SO_0000673
so part of: LOC102182294
location: complement(join(42282..42472,43142..43283,43753..43940,45936..46077,47079..47255,47705..47865,48146..48295,51345..51504,52432..52608))
location: region:42282-52608:-1
so has part: feature:52432-52608:-1:exon
so has part: feature:51345-51504:-1:exon
so has part: feature:48146-48295:-1:exon
so has part: feature:47705-47865:-1:exon
so has part: feature:47079-47255:-1:exon
so has part: feature:45936-46077:-1:exon
so has part: feature:43753-43940:-1:exon
so has part: feature:43142-43283:-1:exon
so has part: feature:42282-42472:-1:exon

XP_005701432.1
type: Protein
SIO_000068: ncbiprotein

position:42282:-1
position: 42282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52608:-1
position: 52608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52432-52608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51345-51504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48146-48295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47705-47865:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47079-47255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45936-46077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43753-43940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43142-43283:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:42282-42472:-1:exon

LOC102183864
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102183864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(63565..64550)
location: region:63565-64550:-1
so has part: feature:63565-64550:-1:exon
subclass of: SO_0000010

102183864
type: Gene
SIO_000068: ncbigene

position:63565:-1
position: 63565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64550:-1
position: 64550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63565-64550:-1:exon

LOC102183864
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102183864
product: olfactory receptor 13A1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_013976855.2
SIO_010081: LOC102183864
subclass of: SO_0000673
so part of: LOC102183864
location: complement(63565..64550)
location: region:63565-64550:-1
so has part: feature:63565-64550:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63565-64550:-1:exon

LOC102183864
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102183864
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: olfactory receptor 13A1-like
translation: MEHGPGAAPGWATRSNETLVTEFVLQGFSELPRLRLPLFGCFFLYIVALTGSAAIIAVVSRSASLRSPMCFFLCNLAATDIVRTSSALPKVLAGLASAENTISFPGCTAQLFFLTWSASSELLLLTVMAYDRYTAICRPLHSSSRMSPRRCRSLAVGVRAVCAFNGSLHAGLMTRPSFCGPNVVAHFFCESPPLLLLSCSPTLVNSILTVLADAFYGVVHFLLTLVPYGCPVTSXLRMRSAAGRRRAFSTCSSHLLAVSVRYSAVLCARISPASSCSPERSKGSAALYTMLSPTRNPISYSLRNMEVTRALGRLVQALLHPGVRGLPP
SIO_010081: LOC102183864
subclass of: SO_0000673
so part of: LOC102183864
location: complement(63565..64550)
location: region:63565-64550:-1
so has part: feature:63565-64550:-1:exon

XP_013832309.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63565-64550:-1:exon

LOC108634000
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(103068..103473)
location: region:103068-103473:-1
so has part: feature:103068-103473:-1:exon

108634000
type: Gene
SIO_000068: ncbigene

position:103068:-1
position: 103068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103473:-1
position: 103473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103068-103473:-1:exon

LOC108634000
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108634000
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC108634000
subclass of: SO_0000673
so part of: LOC108634000
location: complement(103068..103473)
location: region:103068-103473:-1
so has part: feature:103068-103473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103068-103473:-1:exon

LOC102183057
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102183057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(150365..156095)
location: region:150365-156095:-1
so has part: feature:150365-156095:-1:exon

102183057
type: Gene
SIO_000068: ncbigene

position:150365:-1
position: 150365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156095:-1
position: 156095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150365-156095:-1:exon

LOC102183057
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9925
gene: LOC102183057
product: scavenger receptor cysteine-rich domain-containing protein SCART1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_001917340.1
SIO_010081: LOC102183057
so part of: LOC102183057
location: complement(join(150365..150654,151049..151186,151867..151902,152298..152612,152689..152982,153121..153424,153808..154116,154954..156095))
location: region:150365-156095:-1
so has part: feature:154954-156095:-1:exon
so has part: feature:153808-154116:-1:exon
so has part: feature:153121-153424:-1:exon
so has part: feature:152689-152982:-1:exon
so has part: feature:152298-152612:-1:exon
so has part: feature:151867-151902:-1:exon
so has part: feature:151049-151186:-1:exon
so has part: feature:150365-150654:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:154954-156095:-1:exon

position:154954:-1
position: 154954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153808-154116:-1:exon

position:153808:-1
position: 153808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154116:-1
position: 154116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:153121-153424:-1:exon

position:153121:-1
position: 153121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153424:-1
position: 153424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:152689-152982:-1:exon

position:152689:-1
position: 152689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152982:-1
position: 152982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:152298-152612:-1:exon

position:152298:-1
position: 152298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152612:-1
position: 152612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:151867-151902:-1:exon

position:151867:-1
position: 151867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151902:-1
position: 151902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:151049-151186:-1:exon

position:151049:-1
position: 151049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151186:-1
position: 151186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:150365-150654:-1:exon

position:150654:-1
position: 150654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106503889
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(155084..156089)
location: region:155084-156089:-1
so has part: feature:155084-156089:-1:exon
subclass of: SO_0000010

106503889
type: Gene
SIO_000068: ncbigene

position:155084:-1
position: 155084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156089:-1
position: 156089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155084-156089:-1:exon

LOC106503889
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC106503889
product: scavenger receptor cysteine-rich domain-containing protein SCART1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018041697.1
SIO_010081: LOC106503889
subclass of: SO_0000673
so part of: LOC106503889
location: complement(join(155084..155247,155894..156089))
location: region:155084-156089:-1
so has part: feature:155894-156089:-1:exon
so has part: feature:155084-155247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155894-156089:-1:exon

position:155894:-1
position: 155894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:155084-155247:-1:exon

position:155247:-1
position: 155247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106503889
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC106503889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scavenger receptor cysteine-rich domain-containing protein SCART1-like
translation: MVCRQLGCGRAVGAPKYVPLPGEAVQPWLHNVSCRGDEASLWGCGLGAWTKSKCPYEWVVVALCSNGTFREVRLVKGRSPCAGLPEIRNVNGVDRLCGLHREEATVFCQELG
SIO_010081: LOC106503889
subclass of: SO_0000673
so part of: LOC106503889
location: complement(join(155105..155247,155894..156089))
location: region:155105-156089:-1
so has part: feature:155894-156089:-1:exon
so has part: feature:155105-155247:-1:exon

XP_017897186.1
type: Protein
SIO_000068: ncbiprotein

position:155105:-1
position: 155105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155894-156089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155105-155247:-1:exon

LOC108634038
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 176407..178509
location: region:176407-178509:1
so has part: feature:176407-178509:1:exon
subclass of: SO_0000010

108634038
type: Gene
SIO_000068: ncbigene

position:176407:1
position: 176407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178509:1
position: 178509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176407-178509:1:exon

LOC108634038
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC108634038
product: olfactory receptor 226-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018041696.1
SIO_010081: LOC108634038
subclass of: SO_0000673
so part of: LOC108634038
location: 176407..178509
location: region:176407-178509:1
so has part: feature:176407-178509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176407-178509:1:exon

LOC108634038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC108634038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 226-like
translation: MRAPSAGANHSEVTEFILVGFPGSLGLHACLLALFLLAYLLTVTENLLIIAVVRASPALQKPMYLFLSNLSFLEVWYVSVTVPKMLVSLVVPGARRISFAGCMAQLYFFLALACTECALLGVMAYDRYVAICSPLRYPAIMSPGLCSLLAAGSWLSGFTISVGKVFFIARLGYCGPNVMNHFFCDVSPLLNLACSDVALAELVDFLLALLILLGPLLLTVSSYTAIISTVLRVPSAAGRHKAFSTCAAHLAVVVIFYSASLFIYARPRAICSFDLHKLVSVVYVVLTPLLNPVIYCLRNREVKEALHKAVQRAAQARGAVS
SIO_010081: LOC108634038
subclass of: SO_0000673
so part of: LOC108634038
location: 176641..177606
location: region:176641-177606:1
so has part: feature:176641-177606:1:exon

XP_017897185.1
type: Protein
SIO_000068: ncbiprotein

position:176641:1
position: 176641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177606:1
position: 177606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176641-177606:1:exon

LOC102185806
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102185806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 213389..215601
location: region:213389-215601:1
so has part: feature:213389-215601:1:exon
subclass of: SO_0000010

102185806
type: Gene
SIO_000068: ncbigene

position:213389:1
position: 213389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215601:1
position: 215601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213389-215601:1:exon

LOC102185806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102185806
product: olfactory receptor 6B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005698672.3
SIO_010081: LOC102185806
subclass of: SO_0000673
so part of: LOC102185806
location: 213389..215601
location: region:213389-215601:1
so has part: feature:213389-215601:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213389-215601:1:exon

LOC102185806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102185806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 6B1
translation: MVPPPSSQDPVPCPAHITSASLHSSKALRSGLPAKRAMSNSTETSVTEFILLGFPELCHVQGLLFGSFLTIYMVTILENLVVMATIRASRQLHTPMYFFLANLSVLETLYTSVTIPKLLAGLLASARTISFSGCLTQLFLFLSLGSSECFLLATMAYDRYLAICRPLHYPAIMDSRLCLRLALGAWLGGFLASCVSTALISRLRFCGPNVLNHFFCDISPLLQLSCSDTATIEVLDFVAALAVLTTSLLATVISYTHIVATVLRVPGGAGGQKAFSTCASHLVVVALFYTTTIFMYARPHAISSFDLNKLVSVVYSVVTPLLNPIIYCLRNHDIHEALAKLHRAPGPS
SIO_010081: LOC102185806
subclass of: SO_0000673
so part of: LOC102185806
location: 213693..214739
location: region:213693-214739:1
so has part: feature:213693-214739:1:exon

XP_005698729.1
type: Protein
SIO_000068: ncbiprotein

position:213693:1
position: 213693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214739:1
position: 214739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213693-214739:1:exon

SPRN
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SPRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 220917..224733
location: region:220917-224733:1
so has part: feature:220917-224733:1:exon
subclass of: SO_0000010

108634023
type: Gene
SIO_000068: ncbigene

position:220917:1
position: 220917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224733:1
position: 224733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220917-224733:1:exon

SPRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SPRN
product: shadow of prion protein homolog (zebrafish)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 mRNAs, 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_018041273.1
SIO_010081: SPRN
subclass of: SO_0000673
so part of: SPRN
location: join(220917..221506,222244..224733)
location: region:220917-224733:1
so has part: feature:220917-221506:1:exon
so has part: feature:222244-224733:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220917-221506:1:exon

position:221506:1
position: 221506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:222244-224733:1:exon

position:222244:1
position: 222244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SPRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: shadow of prion protein
translation: MNWAAAVCWALLLAATFLCDGSAAKGGRGGARGSARGGRGAARVRVRPAPRYAGSSVRAAAGAAAGAAAGAAAGLAAGSSWRRAAGPTELGLEDAEDGAPGSNGTGRGVYSYWAWTSGAGPTGHRHLCPLLGGALGALRLLRPLRP
SIO_010081: SPRN
subclass of: SO_0000673
so part of: SPRN
location: 222260..222700
location: region:222260-222700:1
so has part: feature:222260-222700:1:exon

XP_017896762.1
type: Protein
SIO_000068: ncbiprotein

position:222260:1
position: 222260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222700:1
position: 222700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222260-222700:1:exon

MTG1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: MTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(224976..243234)
location: region:224976-243234:-1
so has part: feature:224976-243234:-1:exon
subclass of: SO_0000010

102180103
type: Gene
SIO_000068: ncbigene

position:224976:-1
position: 224976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243234:-1
position: 243234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224976-243234:-1:exon

MTG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: MTG1
product: mitochondrial ribosome associated GTPase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018041268.1
SIO_010081: MTG1
subclass of: SO_0000673
so part of: MTG1
location: complement(join(224976..225523,225782..225894,228793..228874,229100..229196,229442..229503,230634..230976,231452..231532,235598..235702,238597..238661,242658..242774,243110..243234))
location: region:224976-243234:-1
so has part: feature:243110-243234:-1:exon
so has part: feature:242658-242774:-1:exon
so has part: feature:238597-238661:-1:exon
so has part: feature:235598-235702:-1:exon
so has part: feature:231452-231532:-1:exon
so has part: feature:230634-230976:-1:exon
so has part: feature:229442-229503:-1:exon
so has part: feature:229100-229196:-1:exon
so has part: feature:228793-228874:-1:exon
so has part: feature:225782-225894:-1:exon
so has part: feature:224976-225523:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:243110-243234:-1:exon

position:243110:-1
position: 243110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:242658-242774:-1:exon

position:242658:-1
position: 242658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242774:-1
position: 242774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:238597-238661:-1:exon

position:238597:-1
position: 238597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238661:-1
position: 238661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:235598-235702:-1:exon

position:235598:-1
position: 235598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235702:-1
position: 235702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:231452-231532:-1:exon

position:231452:-1
position: 231452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231532:-1
position: 231532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:230634-230976:-1:exon

position:230634:-1
position: 230634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230976:-1
position: 230976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:229442-229503:-1:exon

position:229442:-1
position: 229442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229503:-1
position: 229503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:229100-229196:-1:exon

position:229100:-1
position: 229100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229196:-1
position: 229196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:228793-228874:-1:exon

position:228793:-1
position: 228793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228874:-1
position: 228874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:225782-225894:-1:exon

position:225782:-1
position: 225782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225894:-1
position: 225894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:224976-225523:-1:exon

position:225523:-1
position: 225523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: MTG1
product: mitochondrial ribosome associated GTPase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_018041267.1
SIO_010081: MTG1
subclass of: SO_0000673
so part of: MTG1
location: complement(join(224976..225523,225782..225894,228793..228874,229100..229196,229442..229503,230634..230976,231452..231532,235598..235702,238597..238661,239500..239711))
location: region:224976-239711:-1
so has part: feature:239500-239711:-1:exon
so has part: feature:238597-238661:-1:exon
so has part: feature:235598-235702:-1:exon
so has part: feature:231452-231532:-1:exon
so has part: feature:230634-230976:-1:exon
so has part: feature:229442-229503:-1:exon
so has part: feature:229100-229196:-1:exon
so has part: feature:228793-228874:-1:exon
so has part: feature:225782-225894:-1:exon
so has part: feature:224976-225523:-1:exon

position:239711:-1
position: 239711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239500-239711:-1:exon

position:239500:-1
position: 239500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:238597-238661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235598-235702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231452-231532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230634-230976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229442-229503:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229100-229196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228793-228874:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225782-225894:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224976-225523:-1:exon

MTG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: MTG1
product: mitochondrial ribosome associated GTPase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 43 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_018041270.1
SIO_010081: MTG1
subclass of: SO_0000673
so part of: MTG1
location: complement(join(224976..225523,225782..225894,228793..228874,229100..229196,229442..229503,230634..230724,230920..230976,231452..231532,235598..235702,238597..238661,239500..239707))
location: region:224976-239707:-1
so has part: feature:239500-239707:-1:exon
so has part: feature:238597-238661:-1:exon
so has part: feature:235598-235702:-1:exon
so has part: feature:231452-231532:-1:exon
so has part: feature:230920-230976:-1:exon
so has part: feature:230634-230724:-1:exon
so has part: feature:229442-229503:-1:exon
so has part: feature:229100-229196:-1:exon
so has part: feature:228793-228874:-1:exon
so has part: feature:225782-225894:-1:exon
so has part: feature:224976-225523:-1:exon

position:239707:-1
position: 239707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239500-239707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238597-238661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235598-235702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231452-231532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230920-230976:-1:exon

position:230920:-1
position: 230920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:230634-230724:-1:exon

position:230724:-1
position: 230724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:229442-229503:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:229100-229196:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228793-228874:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225782-225894:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:224976-225523:-1:exon

MTG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: MTG1
product: mitochondrial ribosome associated GTPase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_018041269.1
SIO_010081: MTG1
subclass of: SO_0000673
so part of: MTG1
location: complement(join(224976..225523,225782..225894,228793..228874,229100..229196,229442..229503,230634..230976,231452..231532,235598..235702,238472..238590))
location: region:224976-238590:-1
so has part: feature:238472-238590:-1:exon
so has part: feature:235598-235702:-1:exon
so has part: feature:231452-231532:-1:exon
so has part: feature:230634-230976:-1:exon
so has part: feature:229442-229503:-1:exon
so has part: feature:229100-229196:-1:exon
so has part: feature:228793-228874:-1:exon
so has part: feature:225782-225894:-1:exon
so has part: feature:224976-225523:-1:exon

position:238590:-1
position: 238590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238472-238590:-1:exon

position:238472:-1
position: 238472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:235598-235702:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231452-231532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230634-230976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229442-229503:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229100-229196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:228793-228874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:225782-225894:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:224976-225523:-1:exon

MTG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: MTG1
product: mitochondrial ribosome associated GTPase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_018041271.1
SIO_010081: MTG1
subclass of: SO_0000673
so part of: MTG1
location: complement(join(224976..225523,225782..225894,228793..228874,229100..229196,229442..229503,230634..230976,231452..231532,238313..238465))
location: region:224976-238465:-1
so has part: feature:238313-238465:-1:exon
so has part: feature:231452-231532:-1:exon
so has part: feature:230634-230976:-1:exon
so has part: feature:229442-229503:-1:exon
so has part: feature:229100-229196:-1:exon
so has part: feature:228793-228874:-1:exon
so has part: feature:225782-225894:-1:exon
so has part: feature:224976-225523:-1:exon

position:238465:-1
position: 238465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238313-238465:-1:exon

position:238313:-1
position: 238313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231452-231532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230634-230976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229442-229503:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229100-229196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228793-228874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:225782-225894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:224976-225523:-1:exon

MTG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: MTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial ribosome-associated GTPase 1 isoform X4
translation: MRLSPRTLCAAARAAWRESFPLEGRDVARWFPGHMAKGLKKMQGSLRLVDCIIEVHDARIPLSGRNPLFQETLGLKPHLLVLNKMDLADLKEQQKIMQHLEREGLKHVVFTNCVKDENVKQVIPTVMELVGSSYRYHRGEHAEHCVMVTGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSRIQVCERPLMFLLDTPGVLAPRIPSMETGLKLALCGTVLDHLVGEETLADYLLYTLNKHQLLGYVHHYGLGEACDDIASVLKRVAVKLRKTQKVKVLTGTGNVNVIQPDYPAAARDFLRAFRSGLLGPVMLDCDLLQGRSTEEEEP
SIO_010081: MTG1
subclass of: SO_0000673
so part of: MTG1
location: complement(join(225384..225523,225782..225894,228793..228874,229100..229196,229442..229503,230634..230724,230920..230976,231452..231532,235598..235702,238597..238661,239500..239611))
location: region:225384-239611:-1
so has part: feature:239500-239611:-1:exon
so has part: feature:238597-238661:-1:exon
so has part: feature:235598-235702:-1:exon
so has part: feature:231452-231532:-1:exon
so has part: feature:230920-230976:-1:exon
so has part: feature:230634-230724:-1:exon
so has part: feature:229442-229503:-1:exon
so has part: feature:229100-229196:-1:exon
so has part: feature:228793-228874:-1:exon
so has part: feature:225782-225894:-1:exon
so has part: feature:225384-225523:-1:exon

XP_017896759.1
type: Protein
SIO_000068: ncbiprotein

position:225384:-1
position: 225384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239611:-1
position: 239611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239500-239611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238597-238661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235598-235702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231452-231532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230920-230976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:230634-230724:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229442-229503:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:229100-229196:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228793-228874:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225782-225894:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225384-225523:-1:exon

MTG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: MTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial ribosome-associated GTPase 1 isoform X1
translation: MRLSPRTLCAAARAAWRESFPLEGRDVARWFPGHMAKGLKKMQGSLRLVDCIIEVHDARIPLSGRNPLFQETLGLKPHLLVLNKMDLADLKEQQKIMQHLEREGLKHVVFTNCVKDENVKQVIPTVMELVGSSYRYHRGEVGGPGPAEGLPLLLGNPGPVLSPPRGPALGLSRWGGTPHPGGHAGGVGVRGRGLGGAQPLPLRLQHAEHCVMVTGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSRIQVCERPLMFLLDTPGVLAPRIPSMETGLKLALCGTVLDHLVGEETLADYLLYTLNKHQLLGYVHHYGLGEACDDIASVLKRVAVKLRKTQKVKVLTGTGNVNVIQPDYPAAARDFLRAFRSGLLGPVMLDCDLLQGRSTEEEEP
SIO_010081: MTG1
subclass of: SO_0000673
so part of: MTG1
location: complement(join(225384..225523,225782..225894,228793..228874,229100..229196,229442..229503,230634..230976,231452..231532,235598..235702,238597..238661,239500..239611))
location: region:225384-239611:-1
so has part: feature:239500-239611:-1:exon
so has part: feature:238597-238661:-1:exon
so has part: feature:235598-235702:-1:exon
so has part: feature:231452-231532:-1:exon
so has part: feature:230634-230976:-1:exon
so has part: feature:229442-229503:-1:exon
so has part: feature:229100-229196:-1:exon
so has part: feature:228793-228874:-1:exon
so has part: feature:225782-225894:-1:exon
so has part: feature:225384-225523:-1:exon

XP_017896756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239500-239611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238597-238661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235598-235702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231452-231532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230634-230976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229442-229503:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229100-229196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228793-228874:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225782-225894:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225384-225523:-1:exon

MTG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: MTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial ribosome-associated GTPase 1 isoform X2
translation: MQGSLRLVDCIIEVHDARIPLSGRNPLFQETLGLKPHLLVLNKMDLADLKEQQKIMQHLEREGLKHVVFTNCVKDENVKQVIPTVMELVGSSYRYHRGEVGGPGPAEGLPLLLGNPGPVLSPPRGPALGLSRWGGTPHPGGHAGGVGVRGRGLGGAQPLPLRLQHAEHCVMVTGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSRIQVCERPLMFLLDTPGVLAPRIPSMETGLKLALCGTVLDHLVGEETLADYLLYTLNKHQLLGYVHHYGLGEACDDIASVLKRVAVKLRKTQKVKVLTGTGNVNVIQPDYPAAARDFLRAFRSGLLGPVMLDCDLLQGRSTEEEEP
SIO_010081: MTG1
subclass of: SO_0000673
so part of: MTG1
location: complement(join(225384..225523,225782..225894,228793..228874,229100..229196,229442..229503,230634..230976,231452..231532,235598..235702,238597..238650))
location: region:225384-238650:-1
so has part: feature:238597-238650:-1:exon
so has part: feature:235598-235702:-1:exon
so has part: feature:231452-231532:-1:exon
so has part: feature:230634-230976:-1:exon
so has part: feature:229442-229503:-1:exon
so has part: feature:229100-229196:-1:exon
so has part: feature:228793-228874:-1:exon
so has part: feature:225782-225894:-1:exon
so has part: feature:225384-225523:-1:exon

XP_017896757.1
type: Protein
SIO_000068: ncbiprotein

position:238650:-1
position: 238650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238597-238650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235598-235702:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231452-231532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230634-230976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229442-229503:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229100-229196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:228793-228874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:225782-225894:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225384-225523:-1:exon

MTG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: MTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial ribosome-associated GTPase 1 isoform X3
translation: MWLVDCIIEVHDARIPLSGRNPLFQETLGLKPHLLVLNKMDLADLKEQQKIMQHLEREGLKHVVFTNCVKDENVKQVIPTVMELVGSSYRYHRGEVGGPGPAEGLPLLLGNPGPVLSPPRGPALGLSRWGGTPHPGGHAGGVGVRGRGLGGAQPLPLRLQHAEHCVMVTGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSRIQVCERPLMFLLDTPGVLAPRIPSMETGLKLALCGTVLDHLVGEETLADYLLYTLNKHQLLGYVHHYGLGEACDDIASVLKRVAVKLRKTQKVKVLTGTGNVNVIQPDYPAAARDFLRAFRSGLLGPVMLDCDLLQGRSTEEEEP
SIO_010081: MTG1
subclass of: SO_0000673
so part of: MTG1
location: complement(join(225384..225523,225782..225894,228793..228874,229100..229196,229442..229503,230634..230976,231452..231532,235598..235702,238472..238513))
location: region:225384-238513:-1
so has part: feature:238472-238513:-1:exon
so has part: feature:235598-235702:-1:exon
so has part: feature:231452-231532:-1:exon
so has part: feature:230634-230976:-1:exon
so has part: feature:229442-229503:-1:exon
so has part: feature:229100-229196:-1:exon
so has part: feature:228793-228874:-1:exon
so has part: feature:225782-225894:-1:exon
so has part: feature:225384-225523:-1:exon

XP_017896758.1
type: Protein
SIO_000068: ncbiprotein

position:238513:-1
position: 238513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238472-238513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235598-235702:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231452-231532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230634-230976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229442-229503:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229100-229196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:228793-228874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:225782-225894:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225384-225523:-1:exon

MTG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: MTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial ribosome-associated GTPase 1 isoform X5
translation: MPGYPSVVVTWSLRKIMQHLEREGLKHVVFTNCVKDENVKQVIPTVMELVGSSYRYHRGEVGGPGPAEGLPLLLGNPGPVLSPPRGPALGLSRWGGTPHPGGHAGGVGVRGRGLGGAQPLPLRLQHAEHCVMVTGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSRIQVCERPLMFLLDTPGVLAPRIPSMETGLKLALCGTVLDHLVGEETLADYLLYTLNKHQLLGYVHHYGLGEACDDIASVLKRVAVKLRKTQKVKVLTGTGNVNVIQPDYPAAARDFLRAFRSGLLGPVMLDCDLLQGRSTEEEEP
SIO_010081: MTG1
subclass of: SO_0000673
so part of: MTG1
location: complement(join(225384..225523,225782..225894,228793..228874,229100..229196,229442..229503,230634..230976,231452..231532,238313..238354))
location: region:225384-238354:-1
so has part: feature:238313-238354:-1:exon
so has part: feature:231452-231532:-1:exon
so has part: feature:230634-230976:-1:exon
so has part: feature:229442-229503:-1:exon
so has part: feature:229100-229196:-1:exon
so has part: feature:228793-228874:-1:exon
so has part: feature:225782-225894:-1:exon
so has part: feature:225384-225523:-1:exon

XP_017896760.1
type: Protein
SIO_000068: ncbiprotein

position:238354:-1
position: 238354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238313-238354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231452-231532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230634-230976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229442-229503:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229100-229196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228793-228874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:225782-225894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:225384-225523:-1:exon

PAOX
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: PAOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(243346..251960)
location: region:243346-251960:-1
so has part: feature:243346-251960:-1:exon
subclass of: SO_0000010

102185531
type: Gene
SIO_000068: ncbigene

position:243346:-1
position: 243346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251960:-1
position: 251960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243346-251960:-1:exon

PAOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PAOX
product: polyamine oxidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_018041266.1
SIO_010081: PAOX
subclass of: SO_0000673
so part of: PAOX
location: complement(join(243346..243713,246650..246762,247404..247656,249834..250033,250651..251137,251680..251960))
location: region:243346-251960:-1
so has part: feature:251680-251960:-1:exon
so has part: feature:250651-251137:-1:exon
so has part: feature:249834-250033:-1:exon
so has part: feature:247404-247656:-1:exon
so has part: feature:246650-246762:-1:exon
so has part: feature:243346-243713:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251680-251960:-1:exon

position:251680:-1
position: 251680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:250651-251137:-1:exon

position:250651:-1
position: 250651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251137:-1
position: 251137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:249834-250033:-1:exon

position:249834:-1
position: 249834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250033:-1
position: 250033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:247404-247656:-1:exon

position:247404:-1
position: 247404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247656:-1
position: 247656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:246650-246762:-1:exon

position:246650:-1
position: 246650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246762:-1
position: 246762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:243346-243713:-1:exon

position:243713:-1
position: 243713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PAOX
product: polyamine oxidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 33 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_018041265.1
SIO_010081: PAOX
subclass of: SO_0000673
so part of: PAOX
location: complement(join(243348..243713,246043..246200,246650..246762,247404..247656,249834..250033,250651..251137,251680..251958))
location: region:243348-251958:-1
so has part: feature:251680-251958:-1:exon
so has part: feature:250651-251137:-1:exon
so has part: feature:249834-250033:-1:exon
so has part: feature:247404-247656:-1:exon
so has part: feature:246650-246762:-1:exon
so has part: feature:246043-246200:-1:exon
so has part: feature:243348-243713:-1:exon

position:243348:-1
position: 243348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251958:-1
position: 251958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251680-251958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:250651-251137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249834-250033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247404-247656:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:246650-246762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:246043-246200:-1:exon

position:246043:-1
position: 246043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246200:-1
position: 246200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:243348-243713:-1:exon

PAOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PAOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1
translation: MQSGGRQAEAPGRGPRVLVVGGGIAGLGAAQRLCHHPAFSHLRVLEATARAGGRIRSEHSFGGVVEVGAHWIHGPSEGNPVFRLAAKYGLLGEKALSQENQLIETGGHVGLPSVSYASSGVSVSLELVAEMARLFHGLIDQTREFLQAAETAPPSVGEYLKEKIRQHMASWTEDEETKKLKLAILKNLFNVECCVSGTHSLDLVALAPFGEYTVLPGLDCTFPEGYQGLTDCIMASLPKDVMVFDKPVKTIHWNGSFQEASAPGETFPVLVECEDGDCFPAHHVVVTVPLGFLKKHLDTFFEPPLPTEKVEAIRKIGFGTNNKIFLEFKEPFWEPDCQHIQVVWEDTSPLEDAAPALHDAWFKKLIGFWVLPPFQASHVLCGFIAGLESEFMETLSDEDVLRSLTKVLRRVTGNPRLPAPRSVLRSCWHSTPYTRGSYSYVAVGSSGDDMDRLAQPLPSDGKGAQLQVLFAGEATHRAFYSTTHGALLSGWREADRLVTLWDPQAQWPEPRL
SIO_010081: PAOX
subclass of: SO_0000673
so part of: PAOX
location: complement(join(243570..243713,246043..246200,246650..246762,247404..247656,249834..250033,250651..251137,251680..251863))
location: region:243570-251863:-1
so has part: feature:251680-251863:-1:exon
so has part: feature:250651-251137:-1:exon
so has part: feature:249834-250033:-1:exon
so has part: feature:247404-247656:-1:exon
so has part: feature:246650-246762:-1:exon
so has part: feature:246043-246200:-1:exon
so has part: feature:243570-243713:-1:exon

XP_017896754.1
type: Protein
SIO_000068: ncbiprotein

position:243570:-1
position: 243570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251863:-1
position: 251863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251680-251863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:250651-251137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249834-250033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247404-247656:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:246650-246762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:246043-246200:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243570-243713:-1:exon

PAOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PAOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X2
translation: MQSGGRQAEAPGRGPRVLVVGGGIAGLGAAQRLCHHPAFSHLRVLEATARAGGRIRSEHSFGGVVEVGAHWIHGPSEGNPVFRLAAKYGLLGEKALSQENQLIETGGHVGLPSVSYASSGVSVSLELVAEMARLFHGLIDQTREFLQAAETAPPSVGEYLKEKIRQHMASWTEDEETKKLKLAILKNLFNVECCVSGTHSLDLVALAPFGEYTVLPGLDCTFPEGYQGLTDCIMASLPKDVMVFDKPVKTIHWNGSFQEASAPGETFPVLVECEDGDCFPAHHVVVTVPLGFLKKHLDTFFEPPLPTEKVEAIRKIGFGTNNKIFLEFKEPFWEPDCQHIQVVWEDTSPLEDAAPALHDAWFKKLIGFWVLPPFQASHVLCGFIAGLESEFMETLSDEDVLRSLTKVLRRVTAPGAVRRGSHTPGVLLHHARGSAVWLEGG
SIO_010081: PAOX
subclass of: SO_0000673
so part of: PAOX
location: complement(join(243625..243713,246650..246762,247404..247656,249834..250033,250651..251137,251680..251863))
location: region:243625-251863:-1
so has part: feature:251680-251863:-1:exon
so has part: feature:250651-251137:-1:exon
so has part: feature:249834-250033:-1:exon
so has part: feature:247404-247656:-1:exon
so has part: feature:246650-246762:-1:exon
so has part: feature:243625-243713:-1:exon

XP_017896755.1
type: Protein
SIO_000068: ncbiprotein

position:243625:-1
position: 243625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251680-251863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:250651-251137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249834-250033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247404-247656:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:246650-246762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243625-243713:-1:exon

ECHS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ECHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 269303..279836
location: region:269303-279836:1
so has part: feature:269303-279836:1:exon
subclass of: SO_0000010

102185243
type: Gene
SIO_000068: ncbigene

position:269303:1
position: 269303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279836:1
position: 279836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269303-279836:1:exon

ECHS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ECHS1
product: enoyl-CoA hydratase, short chain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 268 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_018041274.1
SIO_010081: ECHS1
subclass of: SO_0000673
so part of: ECHS1
location: join(269303..269460,270551..270748,271153..271280,272103..272202,273347..273451,273898..274017,275048..275115,278934..279836)
location: region:269303-279836:1
so has part: feature:269303-269460:1:exon
so has part: feature:270551-270748:1:exon
so has part: feature:271153-271280:1:exon
so has part: feature:272103-272202:1:exon
so has part: feature:273347-273451:1:exon
so has part: feature:273898-274017:1:exon
so has part: feature:275048-275115:1:exon
so has part: feature:278934-279836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:269303-269460:1:exon

position:269460:1
position: 269460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:270551-270748:1:exon

position:270551:1
position: 270551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270748:1
position: 270748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:271153-271280:1:exon

position:271153:1
position: 271153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271280:1
position: 271280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:272103-272202:1:exon

position:272103:1
position: 272103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272202:1
position: 272202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:273347-273451:1:exon

position:273347:1
position: 273347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273451:1
position: 273451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:273898-274017:1:exon

position:273898:1
position: 273898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274017:1
position: 274017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:275048-275115:1:exon

position:275048:1
position: 275048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275115:1
position: 275115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:278934-279836:1:exon

position:278934:1
position: 278934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ECHS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ECHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enoyl-CoA hydratase, mitochondrial
translation: MAALRALLACVRAPLRPWLFCPVQRSFASRAAFEYIITAKKGKSSNVGLIQLNRPKALNALCNGLIAELNQALQAFEEDPAVGAVVLTGGEKAFAAGADIKEMQSHTFQDCYSGGFLSHWDQLTRVKKPIIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKVFPVETVVEEAIQCAEKIASNSKIVTAMAKESVNAAFEMTLAEGVKLEKKLFYSTFATEDQKEGMAAFVEKRKANFKDQ
SIO_010081: ECHS1
subclass of: SO_0000673
so part of: ECHS1
location: join(269373..269460,270551..270748,271153..271280,272103..272202,273347..273451,273898..274017,275048..275115,278934..278999)
location: region:269373-278999:1
so has part: feature:269373-269460:1:exon
so has part: feature:270551-270748:1:exon
so has part: feature:271153-271280:1:exon
so has part: feature:272103-272202:1:exon
so has part: feature:273347-273451:1:exon
so has part: feature:273898-274017:1:exon
so has part: feature:275048-275115:1:exon
so has part: feature:278934-278999:1:exon

XP_017896763.1
type: Protein
SIO_000068: ncbiprotein

position:269373:1
position: 269373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278999:1
position: 278999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269373-269460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270551-270748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271153-271280:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:272103-272202:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273347-273451:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:273898-274017:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275048-275115:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:278934-278999:1:exon

FUOM
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: FUOM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 286545..289976
location: region:286545-289976:1
so has part: feature:286545-289976:1:exon
subclass of: SO_0000010

102184971
type: Gene
SIO_000068: ncbigene

position:286545:1
position: 286545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289976:1
position: 289976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286545-289976:1:exon

FUOM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FUOM
product: fucose mutarotase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 46 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_018041721.1
SIO_010081: FUOM
subclass of: SO_0000673
so part of: FUOM
location: join(286545..286659,287109..287177,288253..288323,288492..288590,289329..289402,289649..289976)
location: region:286545-289976:1
so has part: feature:286545-286659:1:exon
so has part: feature:287109-287177:1:exon
so has part: feature:288253-288323:1:exon
so has part: feature:288492-288590:1:exon
so has part: feature:289329-289402:1:exon
so has part: feature:289649-289976:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286545-286659:1:exon

position:286659:1
position: 286659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:287109-287177:1:exon

position:287109:1
position: 287109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287177:1
position: 287177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:288253-288323:1:exon

position:288253:1
position: 288253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288323:1
position: 288323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:288492-288590:1:exon

position:288492:1
position: 288492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288590:1
position: 288590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:289329-289402:1:exon

position:289329:1
position: 289329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289402:1
position: 289402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:289649-289976:1:exon

position:289649:1
position: 289649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FUOM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FUOM
product: fucose mutarotase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_018041722.1
SIO_010081: FUOM
subclass of: SO_0000673
so part of: FUOM
location: join(286545..286659,288253..288323,288492..288590,289329..289402,289649..289976)
location: region:286545-289976:1
so has part: feature:286545-286659:1:exon
so has part: feature:288253-288323:1:exon
so has part: feature:288492-288590:1:exon
so has part: feature:289329-289402:1:exon
so has part: feature:289649-289976:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286545-286659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288253-288323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288492-288590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289329-289402:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289649-289976:1:exon

FUOM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FUOM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fucose mutarotase isoform X1
translation: MVVLKGIPALLSPELLFALARMGHGDEIVLADANFPSSSICRGGPEEIRADGLGIPQLLEAVLQLLPLDTYVQSPAVVMEPVPSDRKNGLLAPVWTSYQSVLSRAGYEFSLGMVERFAFYERAKKAFAVVATGETALYGNLILKKGVLAPEDLC
SIO_010081: FUOM
subclass of: SO_0000673
so part of: FUOM
location: join(286575..286659,287109..287177,288253..288323,288492..288590,289329..289402,289649..289715)
location: region:286575-289715:1
so has part: feature:286575-286659:1:exon
so has part: feature:287109-287177:1:exon
so has part: feature:288253-288323:1:exon
so has part: feature:288492-288590:1:exon
so has part: feature:289329-289402:1:exon
so has part: feature:289649-289715:1:exon

XP_017897210.1
type: Protein
SIO_000068: ncbiprotein

position:286575:1
position: 286575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289715:1
position: 289715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286575-286659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287109-287177:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288253-288323:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288492-288590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289329-289402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289649-289715:1:exon

FUOM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FUOM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fucose mutarotase isoform X2
translation: MVVLKGIPALLSPELLFALARMGHGDEIGLGIPQLLEAVLQLLPLDTYVQSPAVVMEPVPSDRKNGLLAPVWTSYQSVLSRAGYEFSLGMVERFAFYERAKKAFAVVATGETALYGNLILKKGVLAPEDLC
SIO_010081: FUOM
subclass of: SO_0000673
so part of: FUOM
location: join(286575..286659,288253..288323,288492..288590,289329..289402,289649..289715)
location: region:286575-289715:1
so has part: feature:286575-286659:1:exon
so has part: feature:288253-288323:1:exon
so has part: feature:288492-288590:1:exon
so has part: feature:289329-289402:1:exon
so has part: feature:289649-289715:1:exon

XP_017897211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286575-286659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288253-288323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288492-288590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289329-289402:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289649-289715:1:exon

PRAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: PRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(295983..300695)
location: region:295983-300695:-1
so has part: feature:295983-300695:-1:exon
subclass of: SO_0000010

102184689
type: Gene
SIO_000068: ncbigene

position:295983:-1
position: 295983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300695:-1
position: 300695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295983-300695:-1:exon

PRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PRAP1
product: proline rich acidic protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018041706.1
SIO_010081: PRAP1
subclass of: SO_0000673
so part of: PRAP1
location: complement(join(295983..296233,296342..296439,296881..296930,297513..297579,299532..300695))
location: region:295983-300695:-1
so has part: feature:299532-300695:-1:exon
so has part: feature:297513-297579:-1:exon
so has part: feature:296881-296930:-1:exon
so has part: feature:296342-296439:-1:exon
so has part: feature:295983-296233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299532-300695:-1:exon

position:299532:-1
position: 299532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297513-297579:-1:exon

position:297513:-1
position: 297513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297579:-1
position: 297579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:296881-296930:-1:exon

position:296881:-1
position: 296881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296930:-1
position: 296930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:296342-296439:-1:exon

position:296342:-1
position: 296342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296439:-1
position: 296439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:295983-296233:-1:exon

position:296233:-1
position: 296233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PRAP1
product: proline rich acidic protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018041705.1
SIO_010081: PRAP1
subclass of: SO_0000673
so part of: PRAP1
location: complement(join(295983..296439,296881..296930,297513..297579,299532..300695))
location: region:295983-300695:-1
so has part: feature:299532-300695:-1:exon
so has part: feature:297513-297579:-1:exon
so has part: feature:296881-296930:-1:exon
so has part: feature:295983-296439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299532-300695:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297513-297579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296881-296930:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295983-296439:-1:exon

PRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PRAP1
product: proline rich acidic protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_018041704.1
SIO_010081: PRAP1
subclass of: SO_0000673
so part of: PRAP1
location: complement(join(295983..296439,296881..296930,297513..298195))
location: region:295983-298195:-1
so has part: feature:297513-298195:-1:exon
so has part: feature:296881-296930:-1:exon
so has part: feature:295983-296439:-1:exon

position:298195:-1
position: 298195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297513-298195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:296881-296930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295983-296439:-1:exon

PRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich acidic protein 1 isoform X3
translation: MRRLLLLASLMAVLLLEAGSARTLQVHVQTKGKVGAEQDTQEVWDARAVESPKDDQLIWLLMAPKLMAPSEEQKGAKALAETDDALGCVLGPREGPEPDQDSLFHAGPEEALEEVRPWARVLPSLQVLHGPEEDRDHIYHPREP
SIO_010081: PRAP1
subclass of: SO_0000673
so part of: PRAP1
location: complement(join(296022..296233,296342..296439,296881..296930,297513..297579,299532..299539))
location: region:296022-299539:-1
so has part: feature:299532-299539:-1:exon
so has part: feature:297513-297579:-1:exon
so has part: feature:296881-296930:-1:exon
so has part: feature:296342-296439:-1:exon
so has part: feature:296022-296233:-1:exon

XP_017897195.1
type: Protein
SIO_000068: ncbiprotein

position:296022:-1
position: 296022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299539:-1
position: 299539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299532-299539:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297513-297579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296881-296930:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296342-296439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296022-296233:-1:exon

PRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich acidic protein 1 isoform X2
translation: MRRLLLLASLMAVLLLEAGSARTLQVHVQTKGKVGAEQDTQEVWDARAVESPKDDQLIWLLMAPKLMAPSEEQKGGGRHCPLGWGPWGRLGWKDGASGGRWRPQPLCLSPGAKALAETDDALGCVLGPREGPEPDQDSLFHAGPEEALEEVRPWARVLPSLQVLHGPEEDRDHIYHPREP
SIO_010081: PRAP1
subclass of: SO_0000673
so part of: PRAP1
location: complement(join(296022..296439,296881..296930,297513..297579,299532..299539))
location: region:296022-299539:-1
so has part: feature:299532-299539:-1:exon
so has part: feature:297513-297579:-1:exon
so has part: feature:296881-296930:-1:exon
so has part: feature:296022-296439:-1:exon

XP_017897194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299532-299539:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297513-297579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296881-296930:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296022-296439:-1:exon

PRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich acidic protein 1 isoform X1
translation: MAVLLLEAGSARTLQVHVQTKGKVGAEQDTQEVWDARAVESPKDDQLIWLLMAPKLMAPSEEQKGGGRHCPLGWGPWGRLGWKDGASGGRWRPQPLCLSPGAKALAETDDALGCVLGPREGPEPDQDSLFHAGPEEALEEVRPWARVLPSLQVLHGPEEDRDHIYHPREP
SIO_010081: PRAP1
subclass of: SO_0000673
so part of: PRAP1
location: complement(join(296022..296439,296881..296930,297513..297557))
location: region:296022-297557:-1
so has part: feature:297513-297557:-1:exon
so has part: feature:296881-296930:-1:exon
so has part: feature:296022-296439:-1:exon

XP_017897193.1
type: Protein
SIO_000068: ncbiprotein

position:297557:-1
position: 297557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297513-297557:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:296881-296930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296022-296439:-1:exon

CALY
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CALY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 309107..320447
location: region:309107-320447:1
so has part: feature:309107-320447:1:exon
subclass of: SO_0000010

102184400
type: Gene
SIO_000068: ncbigene

position:309107:1
position: 309107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320447:1
position: 320447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309107-320447:1:exon

CALY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CALY
product: calcyon neuron specific vesicular protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 ESTs, 8 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_018041715.1
SIO_010081: CALY
subclass of: SO_0000673
so part of: CALY
location: join(309107..309212,316470..316612,316968..317081,317748..317861,318706..319062,319394..320447)
location: region:309107-320447:1
so has part: feature:309107-309212:1:exon
so has part: feature:316470-316612:1:exon
so has part: feature:316968-317081:1:exon
so has part: feature:317748-317861:1:exon
so has part: feature:318706-319062:1:exon
so has part: feature:319394-320447:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309107-309212:1:exon

position:309212:1
position: 309212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:316470-316612:1:exon

position:316470:1
position: 316470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316612:1
position: 316612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:316968-317081:1:exon

position:316968:1
position: 316968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317081:1
position: 317081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:317748-317861:1:exon

position:317748:1
position: 317748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317861:1
position: 317861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:318706-319062:1:exon

position:318706:1
position: 318706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319062:1
position: 319062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:319394-320447:1:exon

position:319394:1
position: 319394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CALY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CALY
product: calcyon neuron specific vesicular protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 ESTs, 8 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_018041714.1
SIO_010081: CALY
subclass of: SO_0000673
so part of: CALY
location: join(309107..309212,316470..316612,316968..317081,317748..317861,318706..319058,319394..320447)
location: region:309107-320447:1
so has part: feature:309107-309212:1:exon
so has part: feature:316470-316612:1:exon
so has part: feature:316968-317081:1:exon
so has part: feature:317748-317861:1:exon
so has part: feature:318706-319058:1:exon
so has part: feature:319394-320447:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309107-309212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316470-316612:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:316968-317081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317748-317861:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:318706-319058:1:exon

position:319058:1
position: 319058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:319394-320447:1:exon

CALY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CALY
product: calcyon neuron specific vesicular protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 ESTs, 8 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041716.1
SIO_010081: CALY
subclass of: SO_0000673
so part of: CALY
location: join(315215..315479,316470..316612,316968..317081,317748..317861,318706..319058,319394..320447)
location: region:315215-320447:1
so has part: feature:315215-315479:1:exon
so has part: feature:316470-316612:1:exon
so has part: feature:316968-317081:1:exon
so has part: feature:317748-317861:1:exon
so has part: feature:318706-319058:1:exon
so has part: feature:319394-320447:1:exon

position:315215:1
position: 315215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315215-315479:1:exon

position:315479:1
position: 315479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:316470-316612:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:316968-317081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317748-317861:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:318706-319058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319394-320447:1:exon

CALY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CALY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuron-specific vesicular protein calcyon
translation: MVKLNCSFSGKTGSGDGGTMDSVPLISPLDVSQLQPSFADQVVIKTQTEYQLSSGDPSTKFSDLEGQKLSGGPEDMHSRMPTGRMIAFTMALMGCLLIMYKAIWYDQFSCPDGFLLRHKICTPLTLEMYYTELDPEHHRSLLAAIGAYPVGRKHGTETPWLSASYHAFKEGPRKASRAQARAAAAAAVTEPSRKPPGKPPGDASLQGEKEAAQKVAGSTPPPAPQ
SIO_010081: CALY
subclass of: SO_0000673
so part of: CALY
location: join(316490..316612,316968..317081,317748..317861,318706..319032)
location: region:316490-319032:1
so has part: feature:316490-316612:1:exon
so has part: feature:316968-317081:1:exon
so has part: feature:317748-317861:1:exon
so has part: feature:318706-319032:1:exon

XP_017897203.1
type: Protein
SIO_000068: ncbiprotein

position:316490:1
position: 316490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319032:1
position: 319032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316490-316612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316968-317081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317748-317861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318706-319032:1:exon

CALY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CALY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuron-specific vesicular protein calcyon
translation: MVKLNCSFSGKTGSGDGGTMDSVPLISPLDVSQLQPSFADQVVIKTQTEYQLSSGDPSTKFSDLEGQKLSGGPEDMHSRMPTGRMIAFTMALMGCLLIMYKAIWYDQFSCPDGFLLRHKICTPLTLEMYYTELDPEHHRSLLAAIGAYPVGRKHGTETPWLSASYHAFKEGPRKASRAQARAAAAAAVTEPSRKPPGKPPGDASLQGEKEAAQKVAGSTPPPAPQ
SIO_010081: CALY
subclass of: SO_0000673
so part of: CALY
location: join(316490..316612,316968..317081,317748..317861,318706..319032)
location: region:316490-319032:1
so has part: feature:316490-316612:1:exon
so has part: feature:316968-317081:1:exon
so has part: feature:317748-317861:1:exon
so has part: feature:318706-319032:1:exon

XP_017897204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316490-316612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316968-317081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317748-317861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318706-319032:1:exon

CALY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CALY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuron-specific vesicular protein calcyon
translation: MVKLNCSFSGKTGSGDGGTMDSVPLISPLDVSQLQPSFADQVVIKTQTEYQLSSGDPSTKFSDLEGQKLSGGPEDMHSRMPTGRMIAFTMALMGCLLIMYKAIWYDQFSCPDGFLLRHKICTPLTLEMYYTELDPEHHRSLLAAIGAYPVGRKHGTETPWLSASYHAFKEGPRKASRAQARAAAAAAVTEPSRKPPGKPPGDASLQGEKEAAQKVAGSTPPPAPQ
SIO_010081: CALY
subclass of: SO_0000673
so part of: CALY
location: join(316490..316612,316968..317081,317748..317861,318706..319032)
location: region:316490-319032:1
so has part: feature:316490-316612:1:exon
so has part: feature:316968-317081:1:exon
so has part: feature:317748-317861:1:exon
so has part: feature:318706-319032:1:exon

XP_017897205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316490-316612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316968-317081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317748-317861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318706-319032:1:exon

LOC108633263
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108633263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(326827..329636)
location: region:326827-329636:-1
so has part: feature:326827-329636:-1:exon
subclass of: SO_0000010

108633263
type: Gene
SIO_000068: ncbigene

position:326827:-1
position: 326827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329636:-1
position: 329636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326827-329636:-1:exon

LOC108633263
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC108633263
product: uncharacterized LOC108633263
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_018041572.1
SIO_010081: LOC108633263
subclass of: SO_0000673
so part of: LOC108633263
location: complement(join(326827..328272,329510..329636))
location: region:326827-329636:-1
so has part: feature:329510-329636:-1:exon
so has part: feature:326827-328272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329510-329636:-1:exon

position:329510:-1
position: 329510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326827-328272:-1:exon

position:328272:-1
position: 328272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108633263
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC108633263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC108633263
translation: MGSCAGEEGGAPGIPPLRPGDQFHLFVSYSSVDAVWTHGLTGRLEAELPGLRVCLHERDFTPGRNVLENMAGCIQQSQKVLLVLSEDFVQSRWCLLEADLSLVGSCLERKPVLPVLLRPCRVPLHLSHLTYLEATDGRFFQKLVQLLCTPNQRLARPPALRSAPALYSGKALLTLDCINRDSLSSWEVGSFSTLAVPDALKEVLEDPELYKRAVGILNSVRSPRCFLRYLGCRVILAIALMLLAVVSLFLPLVLGLRELHPAQRLLVISANVFFCPFFVILSVNTLCWLRRSSRRTLRELACRVGEANLLLAPHSVLVGCETKNKLYFVYVVLGDCKRAFLGAPEGEAAFQEAILRFSSSYACCLAHAHFPHWEEAAGAPGHLEVGLCFCQFVSLQLRRLGAVGVNPV
SIO_010081: LOC108633263
subclass of: SO_0000673
so part of: LOC108633263
location: complement(327017..328243)
location: region:327017-328243:-1
so has part: feature:327017-328243:-1:exon

XP_017897061.1
type: Protein
SIO_000068: ncbiprotein

position:327017:-1
position: 327017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328243:-1
position: 328243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327017-328243:-1:exon

LOC102184116
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102184116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(333346..339945)
location: region:333346-339945:-1
so has part: feature:333346-339945:-1:exon
subclass of: SO_0000010

102184116
type: Gene
SIO_000068: ncbigene

position:333346:-1
position: 333346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339945:-1
position: 339945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333346-339945:-1:exon

LOC102184116
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102184116
product: uncharacterized LOC102184116, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_018041571.1
SIO_010081: LOC102184116
subclass of: SO_0000673
so part of: LOC102184116
location: complement(join(333346..335002,336243..336458,339818..339945))
location: region:333346-339945:-1
so has part: feature:339818-339945:-1:exon
so has part: feature:336243-336458:-1:exon
so has part: feature:333346-335002:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339818-339945:-1:exon

position:339818:-1
position: 339818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336243-336458:-1:exon

position:336243:-1
position: 336243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336458:-1
position: 336458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:333346-335002:-1:exon

position:335002:-1
position: 335002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102184116
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102184116
product: uncharacterized LOC102184116, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_018041570.1
SIO_010081: LOC102184116
subclass of: SO_0000673
so part of: LOC102184116
location: complement(join(333346..335002,336243..336458,339805..339945))
location: region:333346-339945:-1
so has part: feature:339805-339945:-1:exon
so has part: feature:336243-336458:-1:exon
so has part: feature:333346-335002:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339805-339945:-1:exon

position:339805:-1
position: 339805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336243-336458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333346-335002:-1:exon

LOC102184116
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102184116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102184116
translation: MGSCAGEEGGAPGISPLRPGDQFHLFVSYSSVDAVWTHGLTGRLEAELPGLRVCLHERDFTPGRNVLENMAGCIQQSQKVLLVLSEDFVQSRWCLLEADLSLVGSCLERKPVLPVLLRPCRVPLHLSHLTYLEATDGRFFQKLVQLLCTPNQRLARPPALRSAPALYSGKALLTLDCINRDSLSSWEVGSFSTLAVPDALKEVLEDPELYKQAVGILNSVRSPRCFLRYLGCRVILAIALMLLAVVFLFIPFTIGFVARQPPQWFLVISANIFLCLFFMILSVNTLCWLRRSSRRTLRELACRVGEANLLLAPHSVLVGCETKNKLYFVYVVLGDCKRAFLGAPEGEAAFQEAILRFSSSYACCLAHAHFPHWEEAAGAPGHLEVGLCFCQFVSLQLRRLGAVGVNPV
SIO_010081: LOC102184116
subclass of: SO_0000673
so part of: LOC102184116
location: complement(333747..334973)
location: region:333747-334973:-1
so has part: feature:333747-334973:-1:exon

XP_017897059.1
type: Protein
SIO_000068: ncbiprotein

position:333747:-1
position: 333747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334973:-1
position: 334973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333747-334973:-1:exon

LOC102184116
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102184116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102184116
translation: MGSCAGEEGGAPGISPLRPGDQFHLFVSYSSVDAVWTHGLTGRLEAELPGLRVCLHERDFTPGRNVLENMAGCIQQSQKVLLVLSEDFVQSRWCLLEADLSLVGSCLERKPVLPVLLRPCRVPLHLSHLTYLEATDGRFFQKLVQLLCTPNQRLARPPALRSAPALYSGKALLTLDCINRDSLSSWEVGSFSTLAVPDALKEVLEDPELYKQAVGILNSVRSPRCFLRYLGCRVILAIALMLLAVVFLFIPFTIGFVARQPPQWFLVISANIFLCLFFMILSVNTLCWLRRSSRRTLRELACRVGEANLLLAPHSVLVGCETKNKLYFVYVVLGDCKRAFLGAPEGEAAFQEAILRFSSSYACCLAHAHFPHWEEAAGAPGHLEVGLCFCQFVSLQLRRLGAVGVNPV
SIO_010081: LOC102184116
subclass of: SO_0000673
so part of: LOC102184116
location: complement(333747..334973)
location: region:333747-334973:-1
so has part: feature:333747-334973:-1:exon

XP_017897060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333747-334973:-1:exon

LOC108634012
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634012
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 351134..352483
location: region:351134-352483:1
so has part: feature:351134-352483:1:exon
subclass of: SO_0000010

108634012
type: Gene
SIO_000068: ncbigene

position:351134:1
position: 351134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352483:1
position: 352483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351134-352483:1:exon

LOC108634012
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC108634012
product: homeobox protein MSX-3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018041134.1
SIO_010081: LOC108634012
subclass of: SO_0000673
so part of: LOC108634012
location: join(351134..351368,351972..352483)
location: region:351134-352483:1
so has part: feature:351134-351368:1:exon
so has part: feature:351972-352483:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351134-351368:1:exon

position:351368:1
position: 351368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:351972-352483:1:exon

position:351972:1
position: 351972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108634012
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC108634012
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein MSX-3-like
translation: MNPAGLRTWDGDRERLGPLPFGVESLLEAERWVGSEPVQPQEERPRGAAESRAWFPPASPSSAPRAPSPPPCAXRRQKSDRKPRTPFAAAQLLALEHRFGQQQHLSAAERAAFSSSLSLSETQVKIWFQNRRAKAKRLLEAELEKLKLTARPLLPRSSPPFPLAASLHGSAAAPPPVPGLLAAPAAAYGLYYLP
SIO_010081: LOC108634012
subclass of: SO_0000673
so part of: LOC108634012
location: join(351176..351368,351972..352362)
location: region:351176-352362:1
so has part: feature:351176-351368:1:exon
so has part: feature:351972-352362:1:exon

XP_017896623.1
type: Protein
SIO_000068: ncbiprotein

position:351176:1
position: 351176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352362:1
position: 352362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351176-351368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351972-352362:1:exon

ZNF511
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ZNF511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(362597..367264)
location: region:362597-367264:-1
so has part: feature:362597-367264:-1:exon
subclass of: SO_0000010

102183847
type: Gene
SIO_000068: ncbigene

position:362597:-1
position: 362597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367264:-1
position: 367264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362597-367264:-1:exon

ZNF511
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZNF511
product: zinc finger protein 511
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_018041375.1
SIO_010081: ZNF511
subclass of: SO_0000673
so part of: ZNF511
location: complement(join(362597..363957,364628..364762,365830..365954,366101..366302,366594..366667,367066..367264))
location: region:362597-367264:-1
so has part: feature:367066-367264:-1:exon
so has part: feature:366594-366667:-1:exon
so has part: feature:366101-366302:-1:exon
so has part: feature:365830-365954:-1:exon
so has part: feature:364628-364762:-1:exon
so has part: feature:362597-363957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367066-367264:-1:exon

position:367066:-1
position: 367066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:366594-366667:-1:exon

position:366594:-1
position: 366594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366667:-1
position: 366667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:366101-366302:-1:exon

position:366101:-1
position: 366101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366302:-1
position: 366302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:365830-365954:-1:exon

position:365830:-1
position: 365830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365954:-1
position: 365954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:364628-364762:-1:exon

position:364628:-1
position: 364628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364762:-1
position: 364762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:362597-363957:-1:exon

position:363957:-1
position: 363957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF511
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZNF511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 511
translation: MQLPPALHARLAGAPGAAAPLPVQRDSLAGNAPFRFAARQVRFPREHEFFEDGDVQRHLYLQDVITQVAAEPERPRVPEFTCQVAGCCQAFDALEDYEHHYHTLHGNVCSYCKRAFPSGHLLDTHIQEWHDSLFQILAERQDMYQCLVEGCTEKFRTSRDRKQHLVAHHLYPADFRFDKPRKGSRPASQVSTEAAGEDRAPSEGDAMEVCSEHAEAHPEPPRERRVYGHRVPSTICFGQGASRGFKSTKKRSKRP
SIO_010081: ZNF511
subclass of: SO_0000673
so part of: ZNF511
location: complement(join(363879..363957,364628..364762,365830..365954,366101..366302,366594..366667,367066..367218))
location: region:363879-367218:-1
so has part: feature:367066-367218:-1:exon
so has part: feature:366594-366667:-1:exon
so has part: feature:366101-366302:-1:exon
so has part: feature:365830-365954:-1:exon
so has part: feature:364628-364762:-1:exon
so has part: feature:363879-363957:-1:exon

XP_017896864.1
type: Protein
SIO_000068: ncbiprotein

position:363879:-1
position: 363879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367218:-1
position: 367218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367066-367218:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366594-366667:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:366101-366302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:365830-365954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:364628-364762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:363879-363957:-1:exon

TUBGCP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TUBGCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 367277..385281
location: region:367277-385281:1
so has part: feature:367277-385281:1:exon
subclass of: SO_0000010

102183567
type: Gene
SIO_000068: ncbigene

position:367277:1
position: 367277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385281:1
position: 385281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367277-385281:1:exon

TUBGCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TUBGCP2
product: tubulin gamma complex associated protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 65 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_018041371.1
SIO_010081: TUBGCP2
subclass of: SO_0000673
so part of: TUBGCP2
location: join(367277..367373,371197..371379,372890..373018,373626..373802,374736..374895,377032..377239,377422..377621,377883..378072,378172..378317,379566..379746,380518..380698,381253..381425,381569..381697,381904..382024,382440..382583,382957..383085,383722..383885,385043..385281)
location: region:367277-385281:1
so has part: feature:367277-367373:1:exon
so has part: feature:371197-371379:1:exon
so has part: feature:372890-373018:1:exon
so has part: feature:373626-373802:1:exon
so has part: feature:374736-374895:1:exon
so has part: feature:377032-377239:1:exon
so has part: feature:377422-377621:1:exon
so has part: feature:377883-378072:1:exon
so has part: feature:378172-378317:1:exon
so has part: feature:379566-379746:1:exon
so has part: feature:380518-380698:1:exon
so has part: feature:381253-381425:1:exon
so has part: feature:381569-381697:1:exon
so has part: feature:381904-382024:1:exon
so has part: feature:382440-382583:1:exon
so has part: feature:382957-383085:1:exon
so has part: feature:383722-383885:1:exon
so has part: feature:385043-385281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367277-367373:1:exon

position:367373:1
position: 367373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:371197-371379:1:exon

position:371197:1
position: 371197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371379:1
position: 371379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:372890-373018:1:exon

position:372890:1
position: 372890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373018:1
position: 373018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:373626-373802:1:exon

position:373626:1
position: 373626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373802:1
position: 373802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:374736-374895:1:exon

position:374736:1
position: 374736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374895:1
position: 374895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:377032-377239:1:exon

position:377032:1
position: 377032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377239:1
position: 377239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:377422-377621:1:exon

position:377422:1
position: 377422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377621:1
position: 377621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:377883-378072:1:exon

position:377883:1
position: 377883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378072:1
position: 378072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:378172-378317:1:exon

position:378172:1
position: 378172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378317:1
position: 378317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:379566-379746:1:exon

position:379566:1
position: 379566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379746:1
position: 379746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:380518-380698:1:exon

position:380518:1
position: 380518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380698:1
position: 380698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:381253-381425:1:exon

position:381253:1
position: 381253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381425:1
position: 381425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:381569-381697:1:exon

position:381569:1
position: 381569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381697:1
position: 381697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:381904-382024:1:exon

position:381904:1
position: 381904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382024:1
position: 382024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:382440-382583:1:exon

position:382440:1
position: 382440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382583:1
position: 382583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:382957-383085:1:exon

position:382957:1
position: 382957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383085:1
position: 383085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:383722-383885:1:exon

position:383722:1
position: 383722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383885:1
position: 383885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:385043-385281:1:exon

position:385043:1
position: 385043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TUBGCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TUBGCP2
product: tubulin gamma complex associated protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_018041374.1
SIO_010081: TUBGCP2
subclass of: SO_0000673
so part of: TUBGCP2
location: join(367277..367373,371197..371379,372890..373018,373626..373802,374736..374895,377032..377239,377422..377621,377883..378072,378172..378317,379566..379746,380518..380698,381253..381425,381904..382024,382440..382583,382957..383085,383722..383885,385043..385281)
location: region:367277-385281:1
so has part: feature:367277-367373:1:exon
so has part: feature:371197-371379:1:exon
so has part: feature:372890-373018:1:exon
so has part: feature:373626-373802:1:exon
so has part: feature:374736-374895:1:exon
so has part: feature:377032-377239:1:exon
so has part: feature:377422-377621:1:exon
so has part: feature:377883-378072:1:exon
so has part: feature:378172-378317:1:exon
so has part: feature:379566-379746:1:exon
so has part: feature:380518-380698:1:exon
so has part: feature:381253-381425:1:exon
so has part: feature:381904-382024:1:exon
so has part: feature:382440-382583:1:exon
so has part: feature:382957-383085:1:exon
so has part: feature:383722-383885:1:exon
so has part: feature:385043-385281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367277-367373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371197-371379:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:372890-373018:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:373626-373802:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374736-374895:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377032-377239:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377422-377621:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:377883-378072:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:378172-378317:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:379566-379746:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:380518-380698:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381253-381425:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:381904-382024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:382440-382583:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:382957-383085:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:383722-383885:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:385043-385281:1:exon

TUBGCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TUBGCP2
product: tubulin gamma complex associated protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_018041372.1
SIO_010081: TUBGCP2
subclass of: SO_0000673
so part of: TUBGCP2
location: join(367317..367373,368278..368401,371197..371379,372890..373018,373626..373802,374736..374895,377032..377239,377422..377621,377883..378072,378172..378317,379566..379746,380518..380698,381253..381425,381569..381697,381904..382024,382440..382583,382957..383085,383722..383885,385043..385281)
location: region:367317-385281:1
so has part: feature:367317-367373:1:exon
so has part: feature:368278-368401:1:exon
so has part: feature:371197-371379:1:exon
so has part: feature:372890-373018:1:exon
so has part: feature:373626-373802:1:exon
so has part: feature:374736-374895:1:exon
so has part: feature:377032-377239:1:exon
so has part: feature:377422-377621:1:exon
so has part: feature:377883-378072:1:exon
so has part: feature:378172-378317:1:exon
so has part: feature:379566-379746:1:exon
so has part: feature:380518-380698:1:exon
so has part: feature:381253-381425:1:exon
so has part: feature:381569-381697:1:exon
so has part: feature:381904-382024:1:exon
so has part: feature:382440-382583:1:exon
so has part: feature:382957-383085:1:exon
so has part: feature:383722-383885:1:exon
so has part: feature:385043-385281:1:exon

position:367317:1
position: 367317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367317-367373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368278-368401:1:exon

position:368278:1
position: 368278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368401:1
position: 368401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:371197-371379:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372890-373018:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:373626-373802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374736-374895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377032-377239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:377422-377621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:377883-378072:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:378172-378317:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:379566-379746:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:380518-380698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:381253-381425:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:381569-381697:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:381904-382024:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:382440-382583:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:382957-383085:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:383722-383885:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:385043-385281:1:exon

TUBGCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TUBGCP2
product: tubulin gamma complex associated protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_018041373.1
SIO_010081: TUBGCP2
subclass of: SO_0000673
so part of: TUBGCP2
location: join(368421..368440,371197..371379,372890..373018,373626..373802,374736..374895,377032..377239,377422..377621,377883..378072,378172..378317,379566..379746,380518..380698,381253..381425,381569..381697,381904..382024,382440..382583,382957..383085,383722..383885,385043..385281)
location: region:368421-385281:1
so has part: feature:368421-368440:1:exon
so has part: feature:371197-371379:1:exon
so has part: feature:372890-373018:1:exon
so has part: feature:373626-373802:1:exon
so has part: feature:374736-374895:1:exon
so has part: feature:377032-377239:1:exon
so has part: feature:377422-377621:1:exon
so has part: feature:377883-378072:1:exon
so has part: feature:378172-378317:1:exon
so has part: feature:379566-379746:1:exon
so has part: feature:380518-380698:1:exon
so has part: feature:381253-381425:1:exon
so has part: feature:381569-381697:1:exon
so has part: feature:381904-382024:1:exon
so has part: feature:382440-382583:1:exon
so has part: feature:382957-383085:1:exon
so has part: feature:383722-383885:1:exon
so has part: feature:385043-385281:1:exon

position:368421:1
position: 368421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368421-368440:1:exon

position:368440:1
position: 368440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:371197-371379:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:372890-373018:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:373626-373802:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374736-374895:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377032-377239:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377422-377621:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:377883-378072:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:378172-378317:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:379566-379746:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:380518-380698:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381253-381425:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:381569-381697:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:381904-382024:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:382440-382583:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:382957-383085:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:383722-383885:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:385043-385281:1:exon

TUBGCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TUBGCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-tubulin complex component 2 isoform X1
translation: MSEFRIHHDVNELLSLLRVHGGDGAEVYIDLLQKNRTPYVTTTVSTHSAKVKIAEFSRTPEDFLKKYDELKSKNTRNLDPLVYLLSKLTEDRETLQYLQQNAKERAELAASAVASSTASFGTPATASKISMQELEELRKQLGSVATGPTWQQSLELTRKLLRDKQNKRNSGQRLPVFPAWVYERPTLLGDFLTGSGTSADTAVPIGTLPLASQEAAVVEDLLYVLVGVDGRYITAQPLTGRQSRTFLVDPNLDLSIRELVSRILPVAASYSTVTRFIEEKSSFEYGQVNHALAAAMRTLLKEYLILVTQLEQLQRQGLLSLQKLWFYIQPAMRTVDILASLATSVDKGECVGGATLSLLHDRSFSYTGDSQAQELCLYLTTAASVPYFEILEKWIYRGIIDDPYSEFMVEEHELRKEKIQEDYNDKYWEQRYTVVQRHIPSFLQKMAGKVLSTGKYLNVVRECGHDVTCPAAKEVIYTLKERAYVEQIEKAFGYASKVLLGFLMEEKELVAHLRSIKRYFLMGQGDFFVHFMDLTEEELKKPVDDITPTRLEALLELALRMSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMVHADPTELTLSGLEAFSFDYVVKWPLSLIINRKALTRYQMLFRHVFYCKHVERQLCSVWISSKAAKQCSLHSAKWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHVLEKNLRAASNIDDVLGHHTSFLDSCLKDCMLTSPELLRVFSKLMSVCVMFTSCMQRFTQSMKLDSELGRLTLEHGTMQGPPTEAERAEERARKELARKCLAEHVDAPQLASSFEATINKFDKNFSAHLLDLLARLSVYSTSDCEHGMASVISRLDFNGFYTEQLERLSAERSQKVAPTVPGPRGPPAPVPRVAVPAQ
SIO_010081: TUBGCP2
subclass of: SO_0000673
so part of: TUBGCP2
location: join(371230..371379,372890..373018,373626..373802,374736..374895,377032..377239,377422..377621,377883..378072,378172..378317,379566..379746,380518..380698,381253..381425,381569..381697,381904..382024,382440..382583,382957..383085,383722..383885,385043..385178)
location: region:371230-385178:1
so has part: feature:371230-371379:1:exon
so has part: feature:372890-373018:1:exon
so has part: feature:373626-373802:1:exon
so has part: feature:374736-374895:1:exon
so has part: feature:377032-377239:1:exon
so has part: feature:377422-377621:1:exon
so has part: feature:377883-378072:1:exon
so has part: feature:378172-378317:1:exon
so has part: feature:379566-379746:1:exon
so has part: feature:380518-380698:1:exon
so has part: feature:381253-381425:1:exon
so has part: feature:381569-381697:1:exon
so has part: feature:381904-382024:1:exon
so has part: feature:382440-382583:1:exon
so has part: feature:382957-383085:1:exon
so has part: feature:383722-383885:1:exon
so has part: feature:385043-385178:1:exon

XP_017896860.1
type: Protein
SIO_000068: ncbiprotein

position:371230:1
position: 371230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385178:1
position: 385178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371230-371379:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:372890-373018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373626-373802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374736-374895:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377032-377239:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377422-377621:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377883-378072:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378172-378317:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:379566-379746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:380518-380698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:381253-381425:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381569-381697:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:381904-382024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:382440-382583:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:382957-383085:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:383722-383885:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:385043-385178:1:exon

TUBGCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TUBGCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-tubulin complex component 2 isoform X1
translation: MSEFRIHHDVNELLSLLRVHGGDGAEVYIDLLQKNRTPYVTTTVSTHSAKVKIAEFSRTPEDFLKKYDELKSKNTRNLDPLVYLLSKLTEDRETLQYLQQNAKERAELAASAVASSTASFGTPATASKISMQELEELRKQLGSVATGPTWQQSLELTRKLLRDKQNKRNSGQRLPVFPAWVYERPTLLGDFLTGSGTSADTAVPIGTLPLASQEAAVVEDLLYVLVGVDGRYITAQPLTGRQSRTFLVDPNLDLSIRELVSRILPVAASYSTVTRFIEEKSSFEYGQVNHALAAAMRTLLKEYLILVTQLEQLQRQGLLSLQKLWFYIQPAMRTVDILASLATSVDKGECVGGATLSLLHDRSFSYTGDSQAQELCLYLTTAASVPYFEILEKWIYRGIIDDPYSEFMVEEHELRKEKIQEDYNDKYWEQRYTVVQRHIPSFLQKMAGKVLSTGKYLNVVRECGHDVTCPAAKEVIYTLKERAYVEQIEKAFGYASKVLLGFLMEEKELVAHLRSIKRYFLMGQGDFFVHFMDLTEEELKKPVDDITPTRLEALLELALRMSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMVHADPTELTLSGLEAFSFDYVVKWPLSLIINRKALTRYQMLFRHVFYCKHVERQLCSVWISSKAAKQCSLHSAKWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHVLEKNLRAASNIDDVLGHHTSFLDSCLKDCMLTSPELLRVFSKLMSVCVMFTSCMQRFTQSMKLDSELGRLTLEHGTMQGPPTEAERAEERARKELARKCLAEHVDAPQLASSFEATINKFDKNFSAHLLDLLARLSVYSTSDCEHGMASVISRLDFNGFYTEQLERLSAERSQKVAPTVPGPRGPPAPVPRVAVPAQ
SIO_010081: TUBGCP2
subclass of: SO_0000673
so part of: TUBGCP2
location: join(371230..371379,372890..373018,373626..373802,374736..374895,377032..377239,377422..377621,377883..378072,378172..378317,379566..379746,380518..380698,381253..381425,381569..381697,381904..382024,382440..382583,382957..383085,383722..383885,385043..385178)
location: region:371230-385178:1
so has part: feature:371230-371379:1:exon
so has part: feature:372890-373018:1:exon
so has part: feature:373626-373802:1:exon
so has part: feature:374736-374895:1:exon
so has part: feature:377032-377239:1:exon
so has part: feature:377422-377621:1:exon
so has part: feature:377883-378072:1:exon
so has part: feature:378172-378317:1:exon
so has part: feature:379566-379746:1:exon
so has part: feature:380518-380698:1:exon
so has part: feature:381253-381425:1:exon
so has part: feature:381569-381697:1:exon
so has part: feature:381904-382024:1:exon
so has part: feature:382440-382583:1:exon
so has part: feature:382957-383085:1:exon
so has part: feature:383722-383885:1:exon
so has part: feature:385043-385178:1:exon

XP_017896861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371230-371379:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:372890-373018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373626-373802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374736-374895:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377032-377239:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377422-377621:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377883-378072:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378172-378317:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:379566-379746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:380518-380698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:381253-381425:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381569-381697:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:381904-382024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:382440-382583:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:382957-383085:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:383722-383885:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:385043-385178:1:exon

TUBGCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TUBGCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-tubulin complex component 2 isoform X1
translation: MSEFRIHHDVNELLSLLRVHGGDGAEVYIDLLQKNRTPYVTTTVSTHSAKVKIAEFSRTPEDFLKKYDELKSKNTRNLDPLVYLLSKLTEDRETLQYLQQNAKERAELAASAVASSTASFGTPATASKISMQELEELRKQLGSVATGPTWQQSLELTRKLLRDKQNKRNSGQRLPVFPAWVYERPTLLGDFLTGSGTSADTAVPIGTLPLASQEAAVVEDLLYVLVGVDGRYITAQPLTGRQSRTFLVDPNLDLSIRELVSRILPVAASYSTVTRFIEEKSSFEYGQVNHALAAAMRTLLKEYLILVTQLEQLQRQGLLSLQKLWFYIQPAMRTVDILASLATSVDKGECVGGATLSLLHDRSFSYTGDSQAQELCLYLTTAASVPYFEILEKWIYRGIIDDPYSEFMVEEHELRKEKIQEDYNDKYWEQRYTVVQRHIPSFLQKMAGKVLSTGKYLNVVRECGHDVTCPAAKEVIYTLKERAYVEQIEKAFGYASKVLLGFLMEEKELVAHLRSIKRYFLMGQGDFFVHFMDLTEEELKKPVDDITPTRLEALLELALRMSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMVHADPTELTLSGLEAFSFDYVVKWPLSLIINRKALTRYQMLFRHVFYCKHVERQLCSVWISSKAAKQCSLHSAKWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHVLEKNLRAASNIDDVLGHHTSFLDSCLKDCMLTSPELLRVFSKLMSVCVMFTSCMQRFTQSMKLDSELGRLTLEHGTMQGPPTEAERAEERARKELARKCLAEHVDAPQLASSFEATINKFDKNFSAHLLDLLARLSVYSTSDCEHGMASVISRLDFNGFYTEQLERLSAERSQKVAPTVPGPRGPPAPVPRVAVPAQ
SIO_010081: TUBGCP2
subclass of: SO_0000673
so part of: TUBGCP2
location: join(371230..371379,372890..373018,373626..373802,374736..374895,377032..377239,377422..377621,377883..378072,378172..378317,379566..379746,380518..380698,381253..381425,381569..381697,381904..382024,382440..382583,382957..383085,383722..383885,385043..385178)
location: region:371230-385178:1
so has part: feature:371230-371379:1:exon
so has part: feature:372890-373018:1:exon
so has part: feature:373626-373802:1:exon
so has part: feature:374736-374895:1:exon
so has part: feature:377032-377239:1:exon
so has part: feature:377422-377621:1:exon
so has part: feature:377883-378072:1:exon
so has part: feature:378172-378317:1:exon
so has part: feature:379566-379746:1:exon
so has part: feature:380518-380698:1:exon
so has part: feature:381253-381425:1:exon
so has part: feature:381569-381697:1:exon
so has part: feature:381904-382024:1:exon
so has part: feature:382440-382583:1:exon
so has part: feature:382957-383085:1:exon
so has part: feature:383722-383885:1:exon
so has part: feature:385043-385178:1:exon

XP_017896862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371230-371379:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:372890-373018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373626-373802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374736-374895:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377032-377239:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377422-377621:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377883-378072:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378172-378317:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:379566-379746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:380518-380698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:381253-381425:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381569-381697:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:381904-382024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:382440-382583:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:382957-383085:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:383722-383885:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:385043-385178:1:exon

TUBGCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TUBGCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-tubulin complex component 2 isoform X2
translation: MSEFRIHHDVNELLSLLRVHGGDGAEVYIDLLQKNRTPYVTTTVSTHSAKVKIAEFSRTPEDFLKKYDELKSKNTRNLDPLVYLLSKLTEDRETLQYLQQNAKERAELAASAVASSTASFGTPATASKISMQELEELRKQLGSVATGPTWQQSLELTRKLLRDKQNKRNSGQRLPVFPAWVYERPTLLGDFLTGSGTSADTAVPIGTLPLASQEAAVVEDLLYVLVGVDGRYITAQPLTGRQSRTFLVDPNLDLSIRELVSRILPVAASYSTVTRFIEEKSSFEYGQVNHALAAAMRTLLKEYLILVTQLEQLQRQGLLSLQKLWFYIQPAMRTVDILASLATSVDKGECVGGATLSLLHDRSFSYTGDSQAQELCLYLTTAASVPYFEILEKWIYRGIIDDPYSEFMVEEHELRKEKIQEDYNDKYWEQRYTVVQRHIPSFLQKMAGKVLSTGKYLNVVRECGHDVTCPAAKEVIYTLKERAYVEQIEKAFGYASKVLLGFLMEEKELVAHLRSIKRYFLMGQGDFFVHFMDLTEEELKKPVDDITPTRLEALLELALRMSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMVHADPTELTLSGLEAFSFDYVVKWPLSLIINRFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHVLEKNLRAASNIDDVLGHHTSFLDSCLKDCMLTSPELLRVFSKLMSVCVMFTSCMQRFTQSMKLDSELGRLTLEHGTMQGPPTEAERAEERARKELARKCLAEHVDAPQLASSFEATINKFDKNFSAHLLDLLARLSVYSTSDCEHGMASVISRLDFNGFYTEQLERLSAERSQKVAPTVPGPRGPPAPVPRVAVPAQ
SIO_010081: TUBGCP2
subclass of: SO_0000673
so part of: TUBGCP2
location: join(371230..371379,372890..373018,373626..373802,374736..374895,377032..377239,377422..377621,377883..378072,378172..378317,379566..379746,380518..380698,381253..381425,381904..382024,382440..382583,382957..383085,383722..383885,385043..385178)
location: region:371230-385178:1
so has part: feature:371230-371379:1:exon
so has part: feature:372890-373018:1:exon
so has part: feature:373626-373802:1:exon
so has part: feature:374736-374895:1:exon
so has part: feature:377032-377239:1:exon
so has part: feature:377422-377621:1:exon
so has part: feature:377883-378072:1:exon
so has part: feature:378172-378317:1:exon
so has part: feature:379566-379746:1:exon
so has part: feature:380518-380698:1:exon
so has part: feature:381253-381425:1:exon
so has part: feature:381904-382024:1:exon
so has part: feature:382440-382583:1:exon
so has part: feature:382957-383085:1:exon
so has part: feature:383722-383885:1:exon
so has part: feature:385043-385178:1:exon

XP_017896863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371230-371379:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:372890-373018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373626-373802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374736-374895:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377032-377239:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377422-377621:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377883-378072:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378172-378317:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:379566-379746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:380518-380698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:381253-381425:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381904-382024:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:382440-382583:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:382957-383085:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:383722-383885:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:385043-385178:1:exon

ADAM8
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ADAM8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 387350..399001
location: region:387350-399001:1
so has part: feature:387350-399001:1:exon
subclass of: SO_0000010

106503654
type: Gene
SIO_000068: ncbigene

position:387350:1
position: 387350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399001:1
position: 399001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387350-399001:1:exon

ADAM8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ADAM8
product: ADAM metallopeptidase domain 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018041616.1
SIO_010081: ADAM8
subclass of: SO_0000673
so part of: ADAM8
location: join(387350..387521,388527..388630,389487..389563,389659..389737,389825..389901,390032..390215,390478..390537,390617..390685,390944..391113,391217..391298,391650..391798,392052..392229,392454..392543,392627..392816,392904..392985,393287..393449,393860..393937,394455..394539,395307..395421,395889..396066,396463..396546,396696..396749,398077..398154,398524..399001)
location: region:387350-399001:1
so has part: feature:387350-387521:1:exon
so has part: feature:388527-388630:1:exon
so has part: feature:389487-389563:1:exon
so has part: feature:389659-389737:1:exon
so has part: feature:389825-389901:1:exon
so has part: feature:390032-390215:1:exon
so has part: feature:390478-390537:1:exon
so has part: feature:390617-390685:1:exon
so has part: feature:390944-391113:1:exon
so has part: feature:391217-391298:1:exon
so has part: feature:391650-391798:1:exon
so has part: feature:392052-392229:1:exon
so has part: feature:392454-392543:1:exon
so has part: feature:392627-392816:1:exon
so has part: feature:392904-392985:1:exon
so has part: feature:393287-393449:1:exon
so has part: feature:393860-393937:1:exon
so has part: feature:394455-394539:1:exon
so has part: feature:395307-395421:1:exon
so has part: feature:395889-396066:1:exon
so has part: feature:396463-396546:1:exon
so has part: feature:396696-396749:1:exon
so has part: feature:398077-398154:1:exon
so has part: feature:398524-399001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387350-387521:1:exon

position:387521:1
position: 387521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:388527-388630:1:exon

position:388527:1
position: 388527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388630:1
position: 388630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:389487-389563:1:exon

position:389487:1
position: 389487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389563:1
position: 389563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:389659-389737:1:exon

position:389659:1
position: 389659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389737:1
position: 389737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:389825-389901:1:exon

position:389825:1
position: 389825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389901:1
position: 389901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:390032-390215:1:exon

position:390032:1
position: 390032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390215:1
position: 390215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:390478-390537:1:exon

position:390478:1
position: 390478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390537:1
position: 390537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:390617-390685:1:exon

position:390617:1
position: 390617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390685:1
position: 390685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:390944-391113:1:exon

position:390944:1
position: 390944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391113:1
position: 391113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:391217-391298:1:exon

position:391217:1
position: 391217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391298:1
position: 391298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:391650-391798:1:exon

position:391650:1
position: 391650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391798:1
position: 391798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:392052-392229:1:exon

position:392052:1
position: 392052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392229:1
position: 392229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:392454-392543:1:exon

position:392454:1
position: 392454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392543:1
position: 392543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:392627-392816:1:exon

position:392627:1
position: 392627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392816:1
position: 392816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:392904-392985:1:exon

position:392904:1
position: 392904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392985:1
position: 392985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:393287-393449:1:exon

position:393287:1
position: 393287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393449:1
position: 393449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:393860-393937:1:exon

position:393860:1
position: 393860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393937:1
position: 393937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:394455-394539:1:exon

position:394455:1
position: 394455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394539:1
position: 394539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:395307-395421:1:exon

position:395307:1
position: 395307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395421:1
position: 395421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:395889-396066:1:exon

position:395889:1
position: 395889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396066:1
position: 396066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:396463-396546:1:exon

position:396463:1
position: 396463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396546:1
position: 396546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:396696-396749:1:exon

position:396696:1
position: 396696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396749:1
position: 396749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:398077-398154:1:exon

position:398077:1
position: 398077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398154:1
position: 398154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:398524-399001:1:exon

position:398524:1
position: 398524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADAM8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ADAM8
product: ADAM metallopeptidase domain 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018041618.1
SIO_010081: ADAM8
subclass of: SO_0000673
so part of: ADAM8
location: join(387350..387521,388527..388630,389487..389563,389659..389737,389825..389901,390032..390215,390478..390537,390617..390685,390944..391113,391217..391298,391650..391798,392052..392229,392454..392543,392627..392816,392904..392985,393287..393449,393860..393937,394455..394539,395307..395421,395889..396066,396463..396546,396696..396749,398077..398154,398528..399001)
location: region:387350-399001:1
so has part: feature:387350-387521:1:exon
so has part: feature:388527-388630:1:exon
so has part: feature:389487-389563:1:exon
so has part: feature:389659-389737:1:exon
so has part: feature:389825-389901:1:exon
so has part: feature:390032-390215:1:exon
so has part: feature:390478-390537:1:exon
so has part: feature:390617-390685:1:exon
so has part: feature:390944-391113:1:exon
so has part: feature:391217-391298:1:exon
so has part: feature:391650-391798:1:exon
so has part: feature:392052-392229:1:exon
so has part: feature:392454-392543:1:exon
so has part: feature:392627-392816:1:exon
so has part: feature:392904-392985:1:exon
so has part: feature:393287-393449:1:exon
so has part: feature:393860-393937:1:exon
so has part: feature:394455-394539:1:exon
so has part: feature:395307-395421:1:exon
so has part: feature:395889-396066:1:exon
so has part: feature:396463-396546:1:exon
so has part: feature:396696-396749:1:exon
so has part: feature:398077-398154:1:exon
so has part: feature:398528-399001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387350-387521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:388527-388630:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389487-389563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389659-389737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389825-389901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390032-390215:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:390478-390537:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:390617-390685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:390944-391113:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:391217-391298:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:391650-391798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:392052-392229:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:392454-392543:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:392627-392816:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392904-392985:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:393287-393449:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:393860-393937:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:394455-394539:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395307-395421:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:395889-396066:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:396463-396546:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:396696-396749:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:398077-398154:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:398528-399001:1:exon

position:398528:1
position: 398528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADAM8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ADAM8
product: ADAM metallopeptidase domain 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018041617.1
SIO_010081: ADAM8
subclass of: SO_0000673
so part of: ADAM8
location: join(387350..387521,388527..388630,389487..389563,389659..389737,389825..389901,390032..390215,390478..390537,390617..390685,390944..391113,391217..391298,391650..391798,392052..392229,392454..392543,392627..392816,392904..392985,393287..393449,393860..393937,394455..394539,395307..395421,395889..396066,396463..396546,396699..396749,398077..398154,398524..399001)
location: region:387350-399001:1
so has part: feature:387350-387521:1:exon
so has part: feature:388527-388630:1:exon
so has part: feature:389487-389563:1:exon
so has part: feature:389659-389737:1:exon
so has part: feature:389825-389901:1:exon
so has part: feature:390032-390215:1:exon
so has part: feature:390478-390537:1:exon
so has part: feature:390617-390685:1:exon
so has part: feature:390944-391113:1:exon
so has part: feature:391217-391298:1:exon
so has part: feature:391650-391798:1:exon
so has part: feature:392052-392229:1:exon
so has part: feature:392454-392543:1:exon
so has part: feature:392627-392816:1:exon
so has part: feature:392904-392985:1:exon
so has part: feature:393287-393449:1:exon
so has part: feature:393860-393937:1:exon
so has part: feature:394455-394539:1:exon
so has part: feature:395307-395421:1:exon
so has part: feature:395889-396066:1:exon
so has part: feature:396463-396546:1:exon
so has part: feature:396699-396749:1:exon
so has part: feature:398077-398154:1:exon
so has part: feature:398524-399001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387350-387521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:388527-388630:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389487-389563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389659-389737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389825-389901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390032-390215:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:390478-390537:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:390617-390685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:390944-391113:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:391217-391298:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:391650-391798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:392052-392229:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:392454-392543:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:392627-392816:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392904-392985:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:393287-393449:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:393860-393937:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:394455-394539:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395307-395421:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:395889-396066:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:396463-396546:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:396699-396749:1:exon

position:396699:1
position: 396699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:398077-398154:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:398524-399001:1:exon

ADAM8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ADAM8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 8 isoform X1
translation: MRGLGLLLFAALGLQGVAPGAALPHVEQYEVVTPRRLGVPRARRALPSRLGLYPESVSYVLGARGHSFTLHLRKNRDLVGSGYAETYTATNGSQVTERLQRQDHCFYQGRVAGHPHSAASLSTCAGLRGFFQAGPAVRLIEPLAGAGEEGPHALYLAQHLQQEAGTCGVDDSSLDSVLGPRVSAALRPRWSEPRETRYVELFVVTDSTEFQRFGSREAMRQRVLEVVNHVDKLYQELNFRVVLVGLEMWNGGDKIQVSSQPDATLDNFLAWRTRELVGRQAHDNVQLITGVDFTGTTVGLAKVSTMCSQNSGAVNQDHSLNPIGVASTMAHEMGHNLGMDHDENVAGCYCPVPREGGGCVMAASIGSQYPRKFSHCSRADLETFLEKRRTACLVDTPDLDRLVGGPVCGNGFLERGEQCDCGRPEDCQNRCCNASTCLLAEGAECAHGACCHECRVKPAGELCRPAKDQCDLGEHCDGRWPTCPEDAFRENGTPCPGGYCYNGACPTPAQRCQDLWGPGSRVAVETCFRYSISEGCGAGVPLQSGRVNKCGTLFCEGGQETPEGRHCILTIPSGTCRAVVQDGSTAYEPVPKGTKCGEEQVCWDGFCRGLHVYRSRNCSARCNSHGECDHKDRCHCFPGWAPPHCAEPLSDPHAAPGSLRTRVLVGVGALVVLLLIPAGVLIYRRARSPIRRRNVAPKTAMGLSNPLFHEGLSKPAKGRAQAPPGASPEPAPPSQPPKPTASSVTPKRPPPAPPGSLQPPAAMARPPSPLPVYPQQAPGQQLRPAPPAKPLPVLKPKQVIKPTCAPPLPPVKPGARGAQPGPTQEAVDPKVALKPPVQRR
SIO_010081: ADAM8
subclass of: SO_0000673
so part of: ADAM8
location: join(387476..387521,388527..388630,389487..389563,389659..389737,389825..389901,390032..390215,390478..390537,390617..390685,390944..391113,391217..391298,391650..391798,392052..392229,392454..392543,392627..392816,392904..392985,393287..393449,393860..393937,394455..394539,395307..395421,395889..396066,396463..396546,396696..396749,398077..398154,398524..398574)
location: region:387476-398574:1
so has part: feature:387476-387521:1:exon
so has part: feature:388527-388630:1:exon
so has part: feature:389487-389563:1:exon
so has part: feature:389659-389737:1:exon
so has part: feature:389825-389901:1:exon
so has part: feature:390032-390215:1:exon
so has part: feature:390478-390537:1:exon
so has part: feature:390617-390685:1:exon
so has part: feature:390944-391113:1:exon
so has part: feature:391217-391298:1:exon
so has part: feature:391650-391798:1:exon
so has part: feature:392052-392229:1:exon
so has part: feature:392454-392543:1:exon
so has part: feature:392627-392816:1:exon
so has part: feature:392904-392985:1:exon
so has part: feature:393287-393449:1:exon
so has part: feature:393860-393937:1:exon
so has part: feature:394455-394539:1:exon
so has part: feature:395307-395421:1:exon
so has part: feature:395889-396066:1:exon
so has part: feature:396463-396546:1:exon
so has part: feature:396696-396749:1:exon
so has part: feature:398077-398154:1:exon
so has part: feature:398524-398574:1:exon

XP_017897105.1
type: Protein
SIO_000068: ncbiprotein

position:387476:1
position: 387476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398574:1
position: 398574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387476-387521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:388527-388630:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389487-389563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389659-389737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389825-389901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390032-390215:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:390478-390537:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:390617-390685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:390944-391113:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:391217-391298:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:391650-391798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:392052-392229:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:392454-392543:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:392627-392816:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392904-392985:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:393287-393449:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:393860-393937:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:394455-394539:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395307-395421:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:395889-396066:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:396463-396546:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:396696-396749:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:398077-398154:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:398524-398574:1:exon

ADAM8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ADAM8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 8 isoform X2
translation: MRGLGLLLFAALGLQGVAPGAALPHVEQYEVVTPRRLGVPRARRALPSRLGLYPESVSYVLGARGHSFTLHLRKNRDLVGSGYAETYTATNGSQVTERLQRQDHCFYQGRVAGHPHSAASLSTCAGLRGFFQAGPAVRLIEPLAGAGEEGPHALYLAQHLQQEAGTCGVDDSSLDSVLGPRVSAALRPRWSEPRETRYVELFVVTDSTEFQRFGSREAMRQRVLEVVNHVDKLYQELNFRVVLVGLEMWNGGDKIQVSSQPDATLDNFLAWRTRELVGRQAHDNVQLITGVDFTGTTVGLAKVSTMCSQNSGAVNQDHSLNPIGVASTMAHEMGHNLGMDHDENVAGCYCPVPREGGGCVMAASIGSQYPRKFSHCSRADLETFLEKRRTACLVDTPDLDRLVGGPVCGNGFLERGEQCDCGRPEDCQNRCCNASTCLLAEGAECAHGACCHECRVKPAGELCRPAKDQCDLGEHCDGRWPTCPEDAFRENGTPCPGGYCYNGACPTPAQRCQDLWGPGSRVAVETCFRYSISEGCGAGVPLQSGRVNKCGTLFCEGGQETPEGRHCILTIPSGTCRAVVQDGSTAYEPVPKGTKCGEEQVCWDGFCRGLHVYRSRNCSARCNSHGECDHKDRCHCFPGWAPPHCAEPLSDPHAAPGSLRTRVLVGVGALVVLLLIPAGVLIYRRARSPIRRRNVAPKTAMGLSNPLFHEGLSKPAKGRAQAPPGASPEPAPPSQPPKPTASSVTPKRPPPAPPGSLQPPAAMARPPSPLPVYPQQAPGQLRPAPPAKPLPVLKPKQVIKPTCAPPLPPVKPGARGAQPGPTQEAVDPKVALKPPVQRR
SIO_010081: ADAM8
subclass of: SO_0000673
so part of: ADAM8
location: join(387476..387521,388527..388630,389487..389563,389659..389737,389825..389901,390032..390215,390478..390537,390617..390685,390944..391113,391217..391298,391650..391798,392052..392229,392454..392543,392627..392816,392904..392985,393287..393449,393860..393937,394455..394539,395307..395421,395889..396066,396463..396546,396699..396749,398077..398154,398524..398574)
location: region:387476-398574:1
so has part: feature:387476-387521:1:exon
so has part: feature:388527-388630:1:exon
so has part: feature:389487-389563:1:exon
so has part: feature:389659-389737:1:exon
so has part: feature:389825-389901:1:exon
so has part: feature:390032-390215:1:exon
so has part: feature:390478-390537:1:exon
so has part: feature:390617-390685:1:exon
so has part: feature:390944-391113:1:exon
so has part: feature:391217-391298:1:exon
so has part: feature:391650-391798:1:exon
so has part: feature:392052-392229:1:exon
so has part: feature:392454-392543:1:exon
so has part: feature:392627-392816:1:exon
so has part: feature:392904-392985:1:exon
so has part: feature:393287-393449:1:exon
so has part: feature:393860-393937:1:exon
so has part: feature:394455-394539:1:exon
so has part: feature:395307-395421:1:exon
so has part: feature:395889-396066:1:exon
so has part: feature:396463-396546:1:exon
so has part: feature:396699-396749:1:exon
so has part: feature:398077-398154:1:exon
so has part: feature:398524-398574:1:exon

XP_017897106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387476-387521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:388527-388630:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389487-389563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389659-389737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389825-389901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390032-390215:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:390478-390537:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:390617-390685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:390944-391113:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:391217-391298:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:391650-391798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:392052-392229:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:392454-392543:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:392627-392816:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392904-392985:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:393287-393449:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:393860-393937:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:394455-394539:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395307-395421:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:395889-396066:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:396463-396546:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:396699-396749:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:398077-398154:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:398524-398574:1:exon

ADAM8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ADAM8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 8 isoform X3
translation: MRGLGLLLFAALGLQGVAPGAALPHVEQYEVVTPRRLGVPRARRALPSRLGLYPESVSYVLGARGHSFTLHLRKNRDLVGSGYAETYTATNGSQVTERLQRQDHCFYQGRVAGHPHSAASLSTCAGLRGFFQAGPAVRLIEPLAGAGEEGPHALYLAQHLQQEAGTCGVDDSSLDSVLGPRVSAALRPRWSEPRETRYVELFVVTDSTEFQRFGSREAMRQRVLEVVNHVDKLYQELNFRVVLVGLEMWNGGDKIQVSSQPDATLDNFLAWRTRELVGRQAHDNVQLITGVDFTGTTVGLAKVSTMCSQNSGAVNQDHSLNPIGVASTMAHEMGHNLGMDHDENVAGCYCPVPREGGGCVMAASIGSQYPRKFSHCSRADLETFLEKRRTACLVDTPDLDRLVGGPVCGNGFLERGEQCDCGRPEDCQNRCCNASTCLLAEGAECAHGACCHECRVKPAGELCRPAKDQCDLGEHCDGRWPTCPEDAFRENGTPCPGGYCYNGACPTPAQRCQDLWGPGSRVAVETCFRYSISEGCGAGVPLQSGRVNKCGTLFCEGGQETPEGRHCILTIPSGTCRAVVQDGSTAYEPVPKGTKCGEEQVCWDGFCRGLHVYRSRNCSARCNSHGECDHKDRCHCFPGWAPPHCAEPLSDPHAAPGSLRTRVLVGVGALVVLLLIPAGVLIYRRARSPIRRRNVAPKTAMGLSNPLFHEGLSKPAKGRAQAPPGASPEPAPPSQPPKPTASSVTPKRPPPAPPGSLQPPAAMARPPSPLPVYPQQAPGQQLRPAPPAKPLPVLKPKQVIKPTCAPPLPPVKPGARGAQPGPTQLLTRRLL
SIO_010081: ADAM8
subclass of: SO_0000673
so part of: ADAM8
location: join(387476..387521,388527..388630,389487..389563,389659..389737,389825..389901,390032..390215,390478..390537,390617..390685,390944..391113,391217..391298,391650..391798,392052..392229,392454..392543,392627..392816,392904..392985,393287..393449,393860..393937,394455..394539,395307..395421,395889..396066,396463..396546,396696..396749,398077..398154,398528..398551)
location: region:387476-398551:1
so has part: feature:387476-387521:1:exon
so has part: feature:388527-388630:1:exon
so has part: feature:389487-389563:1:exon
so has part: feature:389659-389737:1:exon
so has part: feature:389825-389901:1:exon
so has part: feature:390032-390215:1:exon
so has part: feature:390478-390537:1:exon
so has part: feature:390617-390685:1:exon
so has part: feature:390944-391113:1:exon
so has part: feature:391217-391298:1:exon
so has part: feature:391650-391798:1:exon
so has part: feature:392052-392229:1:exon
so has part: feature:392454-392543:1:exon
so has part: feature:392627-392816:1:exon
so has part: feature:392904-392985:1:exon
so has part: feature:393287-393449:1:exon
so has part: feature:393860-393937:1:exon
so has part: feature:394455-394539:1:exon
so has part: feature:395307-395421:1:exon
so has part: feature:395889-396066:1:exon
so has part: feature:396463-396546:1:exon
so has part: feature:396696-396749:1:exon
so has part: feature:398077-398154:1:exon
so has part: feature:398528-398551:1:exon

XP_017897107.1
type: Protein
SIO_000068: ncbiprotein

position:398551:1
position: 398551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387476-387521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:388527-388630:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389487-389563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389659-389737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389825-389901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390032-390215:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:390478-390537:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:390617-390685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:390944-391113:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:391217-391298:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:391650-391798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:392052-392229:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:392454-392543:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:392627-392816:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392904-392985:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:393287-393449:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:393860-393937:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:394455-394539:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395307-395421:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:395889-396066:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:396463-396546:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:396696-396749:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:398077-398154:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:398528-398551:1:exon

LOC106503655
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 401766..404021
location: region:401766-404021:1
so has part: feature:401766-404021:1:exon
subclass of: SO_0000010

106503655
type: Gene
SIO_000068: ncbigene

position:401766:1
position: 401766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404021:1
position: 404021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401766-404021:1:exon

LOC106503655
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC106503655
product: uncharacterized LOC106503655
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018041621.1
SIO_010081: LOC106503655
subclass of: SO_0000673
so part of: LOC106503655
location: join(401766..401890,401988..402090,403820..404021)
location: region:401766-404021:1
so has part: feature:401766-401890:1:exon
so has part: feature:401988-402090:1:exon
so has part: feature:403820-404021:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401766-401890:1:exon

position:401890:1
position: 401890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:401988-402090:1:exon

position:401988:1
position: 401988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402090:1
position: 402090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:403820-404021:1:exon

position:403820:1
position: 403820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106503655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC106503655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC106503655
translation: MSGGLAGLLSPSACSGAETHWSQRAPEKMGHCAHRGCPAREPWRRLDPGLLQWLLEEKERALAVLQETVKVLQMKVARLEHLVKLKDQRVGALTQQGDQPPGRGTPGPEGPLPLSTRLQPRAHLELP
SIO_010081: LOC106503655
subclass of: SO_0000673
so part of: LOC106503655
location: join(401784..401890,401988..402090,403820..403993)
location: region:401784-403993:1
so has part: feature:401784-401890:1:exon
so has part: feature:401988-402090:1:exon
so has part: feature:403820-403993:1:exon

XP_017897110.1
type: Protein
SIO_000068: ncbiprotein

position:401784:1
position: 401784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403993:1
position: 403993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401784-401890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:401988-402090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:403820-403993:1:exon

MIR202
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
alternative label: chi-mir-202
gene: MIR202
gene synonym: chi-mir-202
note: microRNA 202; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 414126..414223
location: region:414126-414223:1
so has part: feature:414126-414223:1:exon
subclass of: SO_0000571

104795765
type: Gene
SIO_000068: ncbigene

MI0030682
type: miRBase
SIO_000068: mirbase

position:414126:1
position: 414126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414223:1
position: 414223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414126-414223:1:exon

MIR202
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9925
alternative label: chi-mir-202
gene: MIR202
gene synonym: chi-mir-202
product: microRNA 202
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_129642.1
SIO_010081: MIR202
subclass of: SO_0000673
so part of: MIR202
location: 414126..414223
location: region:414126-414223:1
so has part: feature:414126-414223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414126-414223:1:exon

MIR202
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
alternative label: chi-mir-202
nc RNA class: miRNA
gene: MIR202
gene synonym: chi-mir-202
product: chi-miR-202-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR202
subclass of: SO_0000673
so part of: MIR202
location: 414144..414164
location: region:414144-414164:1
so has part: feature:414144-414164:1:exon

MIMAT0036048
type: miRBase
SIO_000068: mirbase

position:414144:1
position: 414144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414164:1
position: 414164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414144-414164:1:exon

MIR202
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
alternative label: chi-mir-202
nc RNA class: miRNA
gene: MIR202
gene synonym: chi-mir-202
product: chi-miR-202-3p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR202
subclass of: SO_0000673
so part of: MIR202
location: 414180..414199
location: region:414180-414199:1
so has part: feature:414180-414199:1:exon

MIMAT0036049
type: miRBase
SIO_000068: mirbase

position:414180:1
position: 414180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414199:1
position: 414199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414180-414199:1:exon

LOC108634001
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634001
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 416302..418743
location: region:416302-418743:1
so has part: feature:416302-418743:1:exon
subclass of: SO_0000010

108634001
type: Gene
SIO_000068: ncbigene

position:416302:1
position: 416302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418743:1
position: 418743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416302-418743:1:exon

LOC108634001
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC108634001
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018041097.1
SIO_010081: LOC108634001
subclass of: SO_0000673
so part of: LOC108634001
location: join(416302..416426,416702..417716,417800..418743)
location: region:416302-418743:1
so has part: feature:416302-416426:1:exon
so has part: feature:416702-417716:1:exon
so has part: feature:417800-418743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:416302-416426:1:exon

position:416426:1
position: 416426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416702-417716:1:exon

position:416702:1
position: 416702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417716:1
position: 417716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:417800-418743:1:exon

position:417800:1
position: 417800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108634001
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC108634001
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MGDQGRRTQPPEAPPPMPQGRRLQALLVSSSEVTVEVDSNAGPEAKRAQSQQQGRWRVQARQAPRSLQVDTRRSPARPWCLAGLSCGLPGAHTPLGGAPVSSGAQRPQAPQDKASSVGTPVLASGRQHAGGCPPHEAHAEAGGWFRSEGARRLSQSRGLRQRPGGAAAAARVARSAESPAGGAAVSHGESGRGFGLRGKEGGAGEDVPAHRGKPHPFSRRPRPLPRARAEERSGAPRPWALSFPVRPRGRTAAPRPRGRSAAQEEALERPGPRESRPPAGLPLGRGGAAPRPPERGRRGEDRVDAAALPPPPARRRPFRKQFLSPVDELRPTGPTPEPTQAKPAPRPILGRLGSVAAAVYPEGRFRAVGRRRGSTELPREDLTWKRSGEATEMERQSESPPLRTGSSGFGSHGMFTGTESRRHRAAAAPAGRQVASELAVWRPKEGARHCGVAPVTSPN
SIO_010081: LOC108634001
subclass of: SO_0000673
so part of: LOC108634001
location: join(416302..416426,416702..417716,417800..418039)
location: region:416302-418039:1
so has part: feature:416302-416426:1:exon
so has part: feature:416702-417716:1:exon
so has part: feature:417800-418039:1:exon

XP_017896586.1
type: Protein
SIO_000068: ncbiprotein

position:418039:1
position: 418039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416302-416426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:416702-417716:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:417800-418039:1:exon

UTF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: UTF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(427099..428408)
location: region:427099-428408:-1
so has part: feature:427099-428408:-1:exon
subclass of: SO_0000010

108634018
type: Gene
SIO_000068: ncbigene

position:427099:-1
position: 427099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428408:-1
position: 428408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427099-428408:-1:exon

UTF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: UTF1
product: undifferentiated embryonic cell transcription factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins
transcript id: XM_018041174.1
SIO_010081: UTF1
subclass of: SO_0000673
so part of: UTF1
location: complement(join(427099..427706,427844..428408))
location: region:427099-428408:-1
so has part: feature:427844-428408:-1:exon
so has part: feature:427099-427706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427844-428408:-1:exon

position:427844:-1
position: 427844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:427099-427706:-1:exon

position:427706:-1
position: 427706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UTF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: UTF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: undifferentiated embryonic cell transcription factor 1
translation: MLLRPRRPPPPEPPSPASPDPEPRLAGGAPATPPRRPASPGALAAPAPPAPPGSPASPGSPVSPGSAQRTPWSARETELLLGTLLQPAVWRALLLDRRQALPTYRRVSAALARQQVRRTPAQCRRRYKFLKDKVRDAHGQPPGPFDAQIRQLMGLLGDNGRRRGRRRSPGPGRPPRGRRPASAAPAEPGAPPPPASRELDSDPAWTLRFSPSPPKSADAPHAPGSPTAPCTFTPARGRPEEPESFRAPGSPPPPSPGPAREDPDSPPGRPEDHAPQQPAPPSLNAALLQTLGHLGDIVSILGPLRDQLLTLNQHVEQLRGSFDQTVSLAVGFILGSAAAERGVLADPRP
SIO_010081: UTF1
subclass of: SO_0000673
so part of: UTF1
location: complement(join(427222..427706,427844..428408))
location: region:427222-428408:-1
so has part: feature:427844-428408:-1:exon
so has part: feature:427222-427706:-1:exon

XP_017896663.1
type: Protein
SIO_000068: ncbiprotein

position:427222:-1
position: 427222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427844-428408:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:427222-427706:-1:exon

KNDC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: KNDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(438510..493118)
location: region:438510-493118:-1
so has part: feature:438510-493118:-1:exon
subclass of: SO_0000010

106501886
type: Gene
SIO_000068: ncbigene

position:438510:-1
position: 438510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493118:-1
position: 493118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438510-493118:-1:exon

KNDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: KNDC1
product: kinase non-catalytic C-lobe domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018041677.1
SIO_010081: KNDC1
subclass of: SO_0000673
so part of: KNDC1
location: complement(join(438510..440162,442181..442338,442922..442981,443051..443173,447434..447584,447793..447875,448144..448350,448809..448988,449057..449204,449711..449824,452530..452750,452885..452982,453071..453164,456638..456981,457510..457625,458399..458543,458724..459388,459457..459619,460235..460328,460823..460876,461369..461527,471482..471543,471632..471703,472329..472443,475215..475897,477005..477122,477419..477565,487095..487153,487406..487604,492955..493118))
location: region:438510-493118:-1
so has part: feature:492955-493118:-1:exon
so has part: feature:487406-487604:-1:exon
so has part: feature:487095-487153:-1:exon
so has part: feature:477419-477565:-1:exon
so has part: feature:477005-477122:-1:exon
so has part: feature:475215-475897:-1:exon
so has part: feature:472329-472443:-1:exon
so has part: feature:471632-471703:-1:exon
so has part: feature:471482-471543:-1:exon
so has part: feature:461369-461527:-1:exon
so has part: feature:460823-460876:-1:exon
so has part: feature:460235-460328:-1:exon
so has part: feature:459457-459619:-1:exon
so has part: feature:458724-459388:-1:exon
so has part: feature:458399-458543:-1:exon
so has part: feature:457510-457625:-1:exon
so has part: feature:456638-456981:-1:exon
so has part: feature:453071-453164:-1:exon
so has part: feature:452885-452982:-1:exon
so has part: feature:452530-452750:-1:exon
so has part: feature:449711-449824:-1:exon
so has part: feature:449057-449204:-1:exon
so has part: feature:448809-448988:-1:exon
so has part: feature:448144-448350:-1:exon
so has part: feature:447793-447875:-1:exon
so has part: feature:447434-447584:-1:exon
so has part: feature:443051-443173:-1:exon
so has part: feature:442922-442981:-1:exon
so has part: feature:442181-442338:-1:exon
so has part: feature:438510-440162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492955-493118:-1:exon

position:492955:-1
position: 492955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:487406-487604:-1:exon

position:487406:-1
position: 487406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487604:-1
position: 487604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:487095-487153:-1:exon

position:487095:-1
position: 487095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487153:-1
position: 487153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:477419-477565:-1:exon

position:477419:-1
position: 477419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477565:-1
position: 477565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:477005-477122:-1:exon

position:477005:-1
position: 477005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477122:-1
position: 477122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:475215-475897:-1:exon

position:475215:-1
position: 475215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475897:-1
position: 475897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:472329-472443:-1:exon

position:472329:-1
position: 472329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472443:-1
position: 472443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:471632-471703:-1:exon

position:471632:-1
position: 471632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471703:-1
position: 471703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:471482-471543:-1:exon

position:471482:-1
position: 471482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471543:-1
position: 471543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:461369-461527:-1:exon

position:461369:-1
position: 461369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461527:-1
position: 461527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:460823-460876:-1:exon

position:460823:-1
position: 460823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460876:-1
position: 460876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:460235-460328:-1:exon

position:460235:-1
position: 460235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460328:-1
position: 460328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:459457-459619:-1:exon

position:459457:-1
position: 459457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459619:-1
position: 459619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:458724-459388:-1:exon

position:458724:-1
position: 458724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459388:-1
position: 459388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:458399-458543:-1:exon

position:458399:-1
position: 458399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458543:-1
position: 458543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:457510-457625:-1:exon

position:457510:-1
position: 457510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457625:-1
position: 457625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:456638-456981:-1:exon

position:456638:-1
position: 456638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456981:-1
position: 456981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:453071-453164:-1:exon

position:453071:-1
position: 453071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453164:-1
position: 453164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:452885-452982:-1:exon

position:452885:-1
position: 452885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452982:-1
position: 452982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:452530-452750:-1:exon

position:452530:-1
position: 452530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452750:-1
position: 452750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:449711-449824:-1:exon

position:449711:-1
position: 449711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449824:-1
position: 449824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:449057-449204:-1:exon

position:449057:-1
position: 449057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449204:-1
position: 449204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:448809-448988:-1:exon

position:448809:-1
position: 448809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448988:-1
position: 448988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:448144-448350:-1:exon

position:448144:-1
position: 448144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448350:-1
position: 448350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:447793-447875:-1:exon

position:447793:-1
position: 447793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447875:-1
position: 447875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:447434-447584:-1:exon

position:447434:-1
position: 447434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447584:-1
position: 447584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:443051-443173:-1:exon

position:443051:-1
position: 443051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443173:-1
position: 443173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:442922-442981:-1:exon

position:442922:-1
position: 442922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442981:-1
position: 442981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:442181-442338:-1:exon

position:442181:-1
position: 442181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442338:-1
position: 442338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:438510-440162:-1:exon

position:440162:-1
position: 440162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KNDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: KNDC1
product: kinase non-catalytic C-lobe domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018041676.1
SIO_010081: KNDC1
subclass of: SO_0000673
so part of: KNDC1
location: complement(join(438510..440162,442181..442338,442922..442981,443051..443173,447434..447584,447793..447875,448144..448350,448809..448988,449057..449204,449711..449824,452530..452750,452885..452982,453071..453164,456638..456981,457510..457625,458399..458543,458724..459388,459457..459619,460235..460328,460823..460900,461369..461527,471482..471543,471632..471703,472329..472443,475215..475897,477005..477122,477419..477565,487095..487153,487406..487604,492955..493118))
location: region:438510-493118:-1
so has part: feature:492955-493118:-1:exon
so has part: feature:487406-487604:-1:exon
so has part: feature:487095-487153:-1:exon
so has part: feature:477419-477565:-1:exon
so has part: feature:477005-477122:-1:exon
so has part: feature:475215-475897:-1:exon
so has part: feature:472329-472443:-1:exon
so has part: feature:471632-471703:-1:exon
so has part: feature:471482-471543:-1:exon
so has part: feature:461369-461527:-1:exon
so has part: feature:460823-460900:-1:exon
so has part: feature:460235-460328:-1:exon
so has part: feature:459457-459619:-1:exon
so has part: feature:458724-459388:-1:exon
so has part: feature:458399-458543:-1:exon
so has part: feature:457510-457625:-1:exon
so has part: feature:456638-456981:-1:exon
so has part: feature:453071-453164:-1:exon
so has part: feature:452885-452982:-1:exon
so has part: feature:452530-452750:-1:exon
so has part: feature:449711-449824:-1:exon
so has part: feature:449057-449204:-1:exon
so has part: feature:448809-448988:-1:exon
so has part: feature:448144-448350:-1:exon
so has part: feature:447793-447875:-1:exon
so has part: feature:447434-447584:-1:exon
so has part: feature:443051-443173:-1:exon
so has part: feature:442922-442981:-1:exon
so has part: feature:442181-442338:-1:exon
so has part: feature:438510-440162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492955-493118:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:487406-487604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:487095-487153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477419-477565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477005-477122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475215-475897:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:472329-472443:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471632-471703:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471482-471543:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461369-461527:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460823-460900:-1:exon

position:460900:-1
position: 460900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:460235-460328:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:459457-459619:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:458724-459388:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:458399-458543:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:457510-457625:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456638-456981:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:453071-453164:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:452885-452982:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:452530-452750:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:449711-449824:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:449057-449204:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:448809-448988:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:448144-448350:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:447793-447875:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:447434-447584:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:443051-443173:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:442922-442981:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:442181-442338:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:438510-440162:-1:exon

KNDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: KNDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein very KIND isoform X2
translation: MDRGAAAFYEEDGKDLDFYDFEPLPTLPEDEENVSLADILSLRDSGLNEQEAWAVCLECSLAMRSVAHSAIFQTLCITPDTLAFNTSGNVCFMEQLSDDPEGAFVPPEFDVTGNTFEAHIYSLGATLKAALDYVPEPEPQPRLSQELEALLGQMQAEDPGDRPDLQSIIALCEEKMPLTSSCRLCRSLSAAGRRVLSIESFGAFQDVSDITWRGPRTPRAAGPKRQLGARSADPEALPAPEGWPPSPTREGLEHPGTPPSKALLSSPVKNGESPGQEELAPERLACLLLDAQQPAADQDRGFLDKSHLRKVRTLPRLQPDGLESGALCLSLTSVKTPLPASEFFSPDPKKAFPEGKHGFSSFQAQPGSRLWPEREQELRRRGDKRVGISSPARESPPPGSEGPQDAGGDPGTSETDKGTADGAGELDRAAAEQGVSLQDLLTKLGRPFKEYELWALSHACLSTLRTLGQHPACLCLDSVLVAEDGAVLFGPPPVNGAYNAFFLAPEVEEQKLMTEKASVYCVAAVLWTAAKFSVPQDRKLALPRRLKTLLLHMARRSAQERPSAAEAIERGMDSRKILAHLRALTCQVYQEEETVGLQRAFSVVEVDPSLAAAPRPNSDLMRIADDSRLVAEQGPVPGQPSGLQGAVLLPEALPSPDSHCRPIVLTADAAVSRDRPALTSGPAESPEATGGQLDPQGDGEQAVTAPSPETAVQLTPSPQGPLRESAPRGSAQGCPWTPASPPEGPSTPTPQSPAPPPPLERQEFSEDRGAEEPIPIRASSDGRGPPTAPPSPRPPAEPPRSRTTQEAGQEPESPPLAAQGPSPATGNPDSPGATPGGQPEAPQPADRKLCPSSVDAPPLPERAACASLQEATRLIQEEFAFDGYLDRGLEALIMGEYIYALKDLTYATFCGAISEKFCDLYWGERLLQSLFNVVNGRTPPSGNASEETGSQLEGSGACAPSSCSPSSRRASCLGPGETGIWGKEKPGVDSDELSRGNFEVGFRPQQSVKAGRERQPEAQLQGGGLAGGGEAESRPPQPPERGLAVSPAPPGALSCSPGWCSAFYEADCFGPDVHNYVQELAGQKASGGPAANAQSPELEQQLTIEKRNFRKTLKFYQKLLQKEKRSRGSEVKTMLSKLKGQLEEMRAKVQFLGLAKKYLQVVYAEQWGLEPCALPVIVNIAAAHCDTLDFSPLDESSSLIFYNASKHPRGSRQPKARVLQAGTPLGLMAYLYSSGAFLEGYVQQFLYTFRYFCSPHDFLHFLLDRISSTLSRAHQEPTSTFTKVYRRSFCLLQAWLEDCYAVDFVRNAGLLGRLQDYLSSQILPLDGSVEHLLGLLEVGSERRAEGTLRGTDLEDPKEVEEDARPLNALCKRLSEDAVSRKSFPWRLSRGNGLALPHHKGRQYSIASALPKPCFLEDFYGPYTKAGEKGPYFLTEYSTQQLFSQLTLLQQELFQKCHPVHFLNSRALGVTDKSAAVPKASSSESLSAKTCSLFLPNYVQDKYLLQLLRSADDVSTWVAAEIVTSHTSKLQVTLLSKFLLIAKSCYERRNFATAMQILGGLEHAAVRQCAAWRILPAKIAEVMEELKAVEVFLKSDSLCLMEGRRLRAQPTLPSAHLLAMHIQQLETGGFTMTNGAHRWSKLRNIAKVASQVHAFQENPYTFAPDPKLQSQLKQRIARFSGADITVLAADSGAGPRQAASEKHSRKIQDKLRRMRATFQ
SIO_010081: KNDC1
subclass of: SO_0000673
so part of: KNDC1
location: complement(join(439931..440162,442181..442338,442922..442981,443051..443173,447434..447584,447793..447875,448144..448350,448809..448988,449057..449204,449711..449824,452530..452750,452885..452982,453071..453164,456638..456981,457510..457625,458399..458543,458724..459388,459457..459619,460235..460328,460823..460876,461369..461527,471482..471543,471632..471703,472329..472443,475215..475897,477005..477122,477419..477565,487095..487153,487406..487604,492955..493047))
location: region:439931-493047:-1
so has part: feature:492955-493047:-1:exon
so has part: feature:487406-487604:-1:exon
so has part: feature:487095-487153:-1:exon
so has part: feature:477419-477565:-1:exon
so has part: feature:477005-477122:-1:exon
so has part: feature:475215-475897:-1:exon
so has part: feature:472329-472443:-1:exon
so has part: feature:471632-471703:-1:exon
so has part: feature:471482-471543:-1:exon
so has part: feature:461369-461527:-1:exon
so has part: feature:460823-460876:-1:exon
so has part: feature:460235-460328:-1:exon
so has part: feature:459457-459619:-1:exon
so has part: feature:458724-459388:-1:exon
so has part: feature:458399-458543:-1:exon
so has part: feature:457510-457625:-1:exon
so has part: feature:456638-456981:-1:exon
so has part: feature:453071-453164:-1:exon
so has part: feature:452885-452982:-1:exon
so has part: feature:452530-452750:-1:exon
so has part: feature:449711-449824:-1:exon
so has part: feature:449057-449204:-1:exon
so has part: feature:448809-448988:-1:exon
so has part: feature:448144-448350:-1:exon
so has part: feature:447793-447875:-1:exon
so has part: feature:447434-447584:-1:exon
so has part: feature:443051-443173:-1:exon
so has part: feature:442922-442981:-1:exon
so has part: feature:442181-442338:-1:exon
so has part: feature:439931-440162:-1:exon

XP_017897166.1
type: Protein
SIO_000068: ncbiprotein

position:439931:-1
position: 439931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493047:-1
position: 493047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492955-493047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:487406-487604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:487095-487153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477419-477565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477005-477122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475215-475897:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:472329-472443:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471632-471703:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471482-471543:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461369-461527:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460823-460876:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460235-460328:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:459457-459619:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:458724-459388:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:458399-458543:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:457510-457625:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456638-456981:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:453071-453164:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:452885-452982:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:452530-452750:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:449711-449824:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:449057-449204:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:448809-448988:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:448144-448350:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:447793-447875:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:447434-447584:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:443051-443173:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:442922-442981:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:442181-442338:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:439931-440162:-1:exon

KNDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: KNDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein very KIND isoform X1
translation: MDRGAAAFYEEDGKDLDFYDFEPLPTLPEDEENVSLADILSLRDSGLNEQEAWAVCLECSLAMRSVAHSAIFQTLCITPDTLAFNTSGNVCFMEQLSDDPEGAFVPPEFDVTGNTFEAHIYSLGATLKAALDYVPEPEPQPRLSQELEALLGQMQAEDPGDRPDLQSIIALCEEKMPLTSSCRLCRSLSAAGRRVLSIESFGAFQDVSDITWRGPRTPRAAGPKRQLGARSADPEALPAPEGWPPSPTREGLEHPGTPPSKALLSSPVKNGESPGQEELAPERLACLLLDAQQPAADQDRGFLDKSHLRKVRTLPRLQPDGLESGALCLSLTSVKTPLPASEFFSPDPKKAFPEGKHGFSSFQAQPGSRLWPEREQELRRRGDKRVGISSPARESPPPGSEGPQDAGGDPGTSETDKGTADGAGELDRAAAEQGVSLQDLLTKLGRPFKEYELWALSHACLSTLRTLGQHPACLCLDSVLVAEDGAVLFGPPPVNGAYNAFFLAPEVEEQKLMTEKASVYCVAAVLWTAAKFSVPQDRKLALPRRLKTLLLHMARRSAQERPSAAEAIETCSGYLLQRGMDSRKILAHLRALTCQVYQEEETVGLQRAFSVVEVDPSLAAAPRPNSDLMRIADDSRLVAEQGPVPGQPSGLQGAVLLPEALPSPDSHCRPIVLTADAAVSRDRPALTSGPAESPEATGGQLDPQGDGEQAVTAPSPETAVQLTPSPQGPLRESAPRGSAQGCPWTPASPPEGPSTPTPQSPAPPPPLERQEFSEDRGAEEPIPIRASSDGRGPPTAPPSPRPPAEPPRSRTTQEAGQEPESPPLAAQGPSPATGNPDSPGATPGGQPEAPQPADRKLCPSSVDAPPLPERAACASLQEATRLIQEEFAFDGYLDRGLEALIMGEYIYALKDLTYATFCGAISEKFCDLYWGERLLQSLFNVVNGRTPPSGNASEETGSQLEGSGACAPSSCSPSSRRASCLGPGETGIWGKEKPGVDSDELSRGNFEVGFRPQQSVKAGRERQPEAQLQGGGLAGGGEAESRPPQPPERGLAVSPAPPGALSCSPGWCSAFYEADCFGPDVHNYVQELAGQKASGGPAANAQSPELEQQLTIEKRNFRKTLKFYQKLLQKEKRSRGSEVKTMLSKLKGQLEEMRAKVQFLGLAKKYLQVVYAEQWGLEPCALPVIVNIAAAHCDTLDFSPLDESSSLIFYNASKHPRGSRQPKARVLQAGTPLGLMAYLYSSGAFLEGYVQQFLYTFRYFCSPHDFLHFLLDRISSTLSRAHQEPTSTFTKVYRRSFCLLQAWLEDCYAVDFVRNAGLLGRLQDYLSSQILPLDGSVEHLLGLLEVGSERRAEGTLRGTDLEDPKEVEEDARPLNALCKRLSEDAVSRKSFPWRLSRGNGLALPHHKGRQYSIASALPKPCFLEDFYGPYTKAGEKGPYFLTEYSTQQLFSQLTLLQQELFQKCHPVHFLNSRALGVTDKSAAVPKASSSESLSAKTCSLFLPNYVQDKYLLQLLRSADDVSTWVAAEIVTSHTSKLQVTLLSKFLLIAKSCYERRNFATAMQILGGLEHAAVRQCAAWRILPAKIAEVMEELKAVEVFLKSDSLCLMEGRRLRAQPTLPSAHLLAMHIQQLETGGFTMTNGAHRWSKLRNIAKVASQVHAFQENPYTFAPDPKLQSQLKQRIARFSGADITVLAADSGAGPRQAASEKHSRKIQDKLRRMRATFQ
SIO_010081: KNDC1
subclass of: SO_0000673
so part of: KNDC1
location: complement(join(439931..440162,442181..442338,442922..442981,443051..443173,447434..447584,447793..447875,448144..448350,448809..448988,449057..449204,449711..449824,452530..452750,452885..452982,453071..453164,456638..456981,457510..457625,458399..458543,458724..459388,459457..459619,460235..460328,460823..460900,461369..461527,471482..471543,471632..471703,472329..472443,475215..475897,477005..477122,477419..477565,487095..487153,487406..487604,492955..493047))
location: region:439931-493047:-1
so has part: feature:492955-493047:-1:exon
so has part: feature:487406-487604:-1:exon
so has part: feature:487095-487153:-1:exon
so has part: feature:477419-477565:-1:exon
so has part: feature:477005-477122:-1:exon
so has part: feature:475215-475897:-1:exon
so has part: feature:472329-472443:-1:exon
so has part: feature:471632-471703:-1:exon
so has part: feature:471482-471543:-1:exon
so has part: feature:461369-461527:-1:exon
so has part: feature:460823-460900:-1:exon
so has part: feature:460235-460328:-1:exon
so has part: feature:459457-459619:-1:exon
so has part: feature:458724-459388:-1:exon
so has part: feature:458399-458543:-1:exon
so has part: feature:457510-457625:-1:exon
so has part: feature:456638-456981:-1:exon
so has part: feature:453071-453164:-1:exon
so has part: feature:452885-452982:-1:exon
so has part: feature:452530-452750:-1:exon
so has part: feature:449711-449824:-1:exon
so has part: feature:449057-449204:-1:exon
so has part: feature:448809-448988:-1:exon
so has part: feature:448144-448350:-1:exon
so has part: feature:447793-447875:-1:exon
so has part: feature:447434-447584:-1:exon
so has part: feature:443051-443173:-1:exon
so has part: feature:442922-442981:-1:exon
so has part: feature:442181-442338:-1:exon
so has part: feature:439931-440162:-1:exon

XP_017897165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492955-493047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:487406-487604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:487095-487153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477419-477565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477005-477122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475215-475897:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:472329-472443:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:471632-471703:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471482-471543:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461369-461527:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460823-460900:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460235-460328:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:459457-459619:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:458724-459388:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:458399-458543:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:457510-457625:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456638-456981:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:453071-453164:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:452885-452982:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:452530-452750:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:449711-449824:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:449057-449204:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:448809-448988:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:448144-448350:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:447793-447875:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:447434-447584:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:443051-443173:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:442922-442981:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:442181-442338:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:439931-440162:-1:exon

LOC108634036
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(466918..467400)
location: region:466918-467400:-1
so has part: feature:466918-467400:-1:exon

108634036
type: Gene
SIO_000068: ncbigene

position:466918:-1
position: 466918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467400:-1
position: 467400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466918-467400:-1:exon

LOC108634036
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9925
gene: LOC108634036
product: thymosin beta-10 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_001917339.1
SIO_010081: LOC108634036
so part of: LOC108634036
location: complement(466918..467400)
location: region:466918-467400:-1
so has part: feature:466918-467400:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:466918-467400:-1:exon

ADGRA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ADGRA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(507993..543965)
location: region:507993-543965:-1
so has part: feature:507993-543965:-1:exon
subclass of: SO_0000010

106501788
type: Gene
SIO_000068: ncbigene

position:507993:-1
position: 507993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543965:-1
position: 543965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507993-543965:-1:exon

ADGRA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ADGRA1
product: adhesion G protein-coupled receptor A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018041698.1
SIO_010081: ADGRA1
subclass of: SO_0000673
so part of: ADGRA1
location: complement(join(507993..509848,510969..511067,530151..530296,534673..534796,535819..535946,542697..542882,543588..543965))
location: region:507993-543965:-1
so has part: feature:543588-543965:-1:exon
so has part: feature:542697-542882:-1:exon
so has part: feature:535819-535946:-1:exon
so has part: feature:534673-534796:-1:exon
so has part: feature:530151-530296:-1:exon
so has part: feature:510969-511067:-1:exon
so has part: feature:507993-509848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:543588-543965:-1:exon

position:543588:-1
position: 543588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:542697-542882:-1:exon

position:542697:-1
position: 542697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542882:-1
position: 542882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:535819-535946:-1:exon

position:535819:-1
position: 535819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535946:-1
position: 535946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:534673-534796:-1:exon

position:534673:-1
position: 534673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534796:-1
position: 534796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:530151-530296:-1:exon

position:530151:-1
position: 530151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530296:-1
position: 530296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:510969-511067:-1:exon

position:510969:-1
position: 510969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511067:-1
position: 511067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:507993-509848:-1:exon

position:509848:-1
position: 509848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADGRA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ADGRA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor A1
translation: MDLRTVLSLPPSPGELLHPVVYACTAVMLLCLLASAATYVVHQSAIRISRLGRHTLLNFCLHAALTFSTFAGGINRTRFPTLCQAVGIVLHYSTLSTLLWIGVTARNIYKQVTRKAPLCPGAGQPPYPKQPLLRFYLVGGGAPLVICGVTAATNIRNYGMEAEDAAYCWMAWEPSLGAFYGPVAFIALVTCVYFLGTYVQLRRHPERRYELRERTEEQQRLAGPEGGPGTQGAAPPAPDGRAASLLQNEHSFRAQLRAAAFTLFLFAATWAFGALAVSQGNFLDMVFSCLYGAFCVTLGLFVLIHHCAKRDDVWHCWWSCCPARRDPHPATLSARPALDANGDALGHVACLQDSPCPGKALGFSHPSASHCKMTNLQASQGHVSCLSPATPCCAQMHCEQLTEEAAHVHAGDAFEHDTHLHTCVQGRTKPNYFSRHRAAAAEQYAYHIPSSLDGSPNSSRSESPPSSLEGPVGPHALACCAQGDPFPLVNQPESGAPSPVLYSCPPRPGREAARGPARLEMLRRTQSLPFGGPGQNGLLKGDVRDAAPFGSDSTGNIRTGPWRNETTV
SIO_010081: ADGRA1
subclass of: SO_0000673
so part of: ADGRA1
location: complement(join(508642..509848,510969..511067,530151..530296,534673..534796,535819..535946,542697..542699))
location: region:508642-542699:-1
so has part: feature:542697-542699:-1:exon
so has part: feature:535819-535946:-1:exon
so has part: feature:534673-534796:-1:exon
so has part: feature:530151-530296:-1:exon
so has part: feature:510969-511067:-1:exon
so has part: feature:508642-509848:-1:exon

XP_017897187.1
type: Protein
SIO_000068: ncbiprotein

position:508642:-1
position: 508642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542699:-1
position: 542699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542697-542699:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535819-535946:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:534673-534796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530151-530296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:510969-511067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508642-509848:-1:exon

CFAP46
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CFAP46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 639260..733296
location: region:639260-733296:1
so has part: feature:639260-733296:1:exon
subclass of: SO_0000010

102182194
type: Gene
SIO_000068: ncbigene

position:639260:1
position: 639260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733296:1
position: 733296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639260-733296:1:exon

CFAP46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CFAP46
product: cilia and flagella associated protein 46
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018041099.1
SIO_010081: CFAP46
subclass of: SO_0000673
so part of: CFAP46
location: join(639260..639308,639689..639981,640129..640260,640715..640779,641621..641785,642757..642880,643312..643406,644325..644435,647042..647141,653992..654090,655720..655910,661868..662096,662191..662311,662919..663042,663166..663296,663808..663935,664784..664917,666123..666335,667219..667384,669145..669294,670506..670613,674055..674221,681988..682119,682444..682606,684215..684299,687578..687716,688406..688589,691685..691840,692667..692861,694114..694269,694870..695019,696786..696934,697775..697873,698724..698856,699513..699659,701074..701274,701358..701464,702555..702731,703419..703554,710482..710670,711315..711503,712400..712450,712818..712949,713037..713216,713638..713808,718495..718592,719009..719085,719719..719849,720036..720160,720884..720972,721517..721678,728848..728918,729040..729100,729170..729205,729651..729753,730329..730441,731138..731219,731750..731886,731985..732065,732865..733296)
location: region:639260-733296:1
so has part: feature:639260-639308:1:exon
so has part: feature:639689-639981:1:exon
so has part: feature:640129-640260:1:exon
so has part: feature:640715-640779:1:exon
so has part: feature:641621-641785:1:exon
so has part: feature:642757-642880:1:exon
so has part: feature:643312-643406:1:exon
so has part: feature:644325-644435:1:exon
so has part: feature:647042-647141:1:exon
so has part: feature:653992-654090:1:exon
so has part: feature:655720-655910:1:exon
so has part: feature:661868-662096:1:exon
so has part: feature:662191-662311:1:exon
so has part: feature:662919-663042:1:exon
so has part: feature:663166-663296:1:exon
so has part: feature:663808-663935:1:exon
so has part: feature:664784-664917:1:exon
so has part: feature:666123-666335:1:exon
so has part: feature:667219-667384:1:exon
so has part: feature:669145-669294:1:exon
so has part: feature:670506-670613:1:exon
so has part: feature:674055-674221:1:exon
so has part: feature:681988-682119:1:exon
so has part: feature:682444-682606:1:exon
so has part: feature:684215-684299:1:exon
so has part: feature:687578-687716:1:exon
so has part: feature:688406-688589:1:exon
so has part: feature:691685-691840:1:exon
so has part: feature:692667-692861:1:exon
so has part: feature:694114-694269:1:exon
so has part: feature:694870-695019:1:exon
so has part: feature:696786-696934:1:exon
so has part: feature:697775-697873:1:exon
so has part: feature:698724-698856:1:exon
so has part: feature:699513-699659:1:exon
so has part: feature:701074-701274:1:exon
so has part: feature:701358-701464:1:exon
so has part: feature:702555-702731:1:exon
so has part: feature:703419-703554:1:exon
so has part: feature:710482-710670:1:exon
so has part: feature:711315-711503:1:exon
so has part: feature:712400-712450:1:exon
so has part: feature:712818-712949:1:exon
so has part: feature:713037-713216:1:exon
so has part: feature:713638-713808:1:exon
so has part: feature:718495-718592:1:exon
so has part: feature:719009-719085:1:exon
so has part: feature:719719-719849:1:exon
so has part: feature:720036-720160:1:exon
so has part: feature:720884-720972:1:exon
so has part: feature:721517-721678:1:exon
so has part: feature:728848-728918:1:exon
so has part: feature:729040-729100:1:exon
so has part: feature:729170-729205:1:exon
so has part: feature:729651-729753:1:exon
so has part: feature:730329-730441:1:exon
so has part: feature:731138-731219:1:exon
so has part: feature:731750-731886:1:exon
so has part: feature:731985-732065:1:exon
so has part: feature:732865-733296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:639260-639308:1:exon

position:639308:1
position: 639308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:639689-639981:1:exon

position:639689:1
position: 639689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639981:1
position: 639981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:640129-640260:1:exon

position:640129:1
position: 640129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640260:1
position: 640260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:640715-640779:1:exon

position:640715:1
position: 640715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640779:1
position: 640779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:641621-641785:1:exon

position:641621:1
position: 641621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641785:1
position: 641785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:642757-642880:1:exon

position:642757:1
position: 642757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642880:1
position: 642880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:643312-643406:1:exon

position:643312:1
position: 643312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643406:1
position: 643406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:644325-644435:1:exon

position:644325:1
position: 644325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644435:1
position: 644435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:647042-647141:1:exon

position:647042:1
position: 647042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647141:1
position: 647141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:653992-654090:1:exon

position:653992:1
position: 653992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654090:1
position: 654090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:655720-655910:1:exon

position:655720:1
position: 655720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655910:1
position: 655910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:661868-662096:1:exon

position:661868:1
position: 661868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662096:1
position: 662096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:662191-662311:1:exon

position:662191:1
position: 662191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662311:1
position: 662311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:662919-663042:1:exon

position:662919:1
position: 662919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663042:1
position: 663042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:663166-663296:1:exon

position:663166:1
position: 663166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663296:1
position: 663296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:663808-663935:1:exon

position:663808:1
position: 663808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663935:1
position: 663935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:664784-664917:1:exon

position:664784:1
position: 664784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664917:1
position: 664917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:666123-666335:1:exon

position:666123:1
position: 666123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666335:1
position: 666335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:667219-667384:1:exon

position:667219:1
position: 667219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667384:1
position: 667384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:669145-669294:1:exon

position:669145:1
position: 669145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669294:1
position: 669294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:670506-670613:1:exon

position:670506:1
position: 670506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670613:1
position: 670613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:674055-674221:1:exon

position:674055:1
position: 674055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674221:1
position: 674221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:681988-682119:1:exon

position:681988:1
position: 681988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682119:1
position: 682119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:682444-682606:1:exon

position:682444:1
position: 682444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682606:1
position: 682606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:684215-684299:1:exon

position:684215:1
position: 684215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684299:1
position: 684299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:687578-687716:1:exon

position:687578:1
position: 687578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687716:1
position: 687716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:688406-688589:1:exon

position:688406:1
position: 688406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688589:1
position: 688589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:691685-691840:1:exon

position:691685:1
position: 691685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691840:1
position: 691840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:692667-692861:1:exon

position:692667:1
position: 692667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692861:1
position: 692861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:694114-694269:1:exon

position:694114:1
position: 694114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694269:1
position: 694269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:694870-695019:1:exon

position:694870:1
position: 694870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695019:1
position: 695019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:696786-696934:1:exon

position:696786:1
position: 696786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696934:1
position: 696934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:697775-697873:1:exon

position:697775:1
position: 697775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697873:1
position: 697873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:698724-698856:1:exon

position:698724:1
position: 698724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698856:1
position: 698856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:699513-699659:1:exon

position:699513:1
position: 699513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699659:1
position: 699659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:701074-701274:1:exon

position:701074:1
position: 701074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701274:1
position: 701274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:701358-701464:1:exon

position:701358:1
position: 701358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701464:1
position: 701464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:702555-702731:1:exon

position:702555:1
position: 702555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702731:1
position: 702731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:703419-703554:1:exon

position:703419:1
position: 703419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703554:1
position: 703554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:710482-710670:1:exon

position:710482:1
position: 710482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710670:1
position: 710670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:711315-711503:1:exon

position:711315:1
position: 711315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711503:1
position: 711503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:712400-712450:1:exon

position:712400:1
position: 712400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712450:1
position: 712450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:712818-712949:1:exon

position:712818:1
position: 712818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712949:1
position: 712949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:713037-713216:1:exon

position:713037:1
position: 713037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713216:1
position: 713216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:713638-713808:1:exon

position:713638:1
position: 713638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713808:1
position: 713808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:718495-718592:1:exon

position:718495:1
position: 718495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718592:1
position: 718592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:719009-719085:1:exon

position:719009:1
position: 719009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719085:1
position: 719085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:719719-719849:1:exon

position:719719:1
position: 719719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719849:1
position: 719849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:720036-720160:1:exon

position:720036:1
position: 720036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720160:1
position: 720160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:720884-720972:1:exon

position:720884:1
position: 720884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720972:1
position: 720972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:721517-721678:1:exon

position:721517:1
position: 721517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721678:1
position: 721678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:728848-728918:1:exon

position:728848:1
position: 728848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728918:1
position: 728918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:729040-729100:1:exon

position:729040:1
position: 729040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729100:1
position: 729100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:729170-729205:1:exon

position:729170:1
position: 729170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729205:1
position: 729205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:729651-729753:1:exon

position:729651:1
position: 729651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729753:1
position: 729753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:730329-730441:1:exon

position:730329:1
position: 730329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730441:1
position: 730441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:731138-731219:1:exon

position:731138:1
position: 731138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731219:1
position: 731219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:731750-731886:1:exon

position:731750:1
position: 731750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731886:1
position: 731886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:731985-732065:1:exon

position:731985:1
position: 731985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732065:1
position: 732065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:732865-733296:1:exon

position:732865:1
position: 732865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CFAP46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CFAP46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 46
translation: MDLVITQELARAESQQGLPRGSPAGLLPGEERTSGAQPARVQPRPPPPDRPHCCSAGRWTLDDRLFLTPILVDTDSLKRAYQLIKSANLGKSEFDPTESFSPDLFVLCAEQALKMGQREVSEDCIQMYFKVKGPVTQFLGRAHLCRAQLCAPKSTKNMEEFENCVTQYMKAISFAKGEPRYYFLVYNASVLYWQMVRPFLRPGYRHYLVPSLAQMVSALSQTEEEDKEWQAELMLELLECYLQAGESGEAAKFCATAAPFIKAHVPQKYRQIFALMVQHELMDEPQLKEERRSSISLSVTFHINMLKAKLDQNDLPEDVNKILKDTYTLLSQYNHQRLPSVREEKMILLFELAHLSLTLKCWEIASDCLSDLKKMDSKDPARLIEVECLEYELEAVRLENKIKTYTREAVEAQLDVVRRLDVTLQRAVRLGEPRLVHTVCATQWNACLPLLQYNLRHQLWKPLTSIADVLEKADSLAAQLRCQVHVELAHIEEDADRLEPAMEHLRKAALLDGLGVYQDKIRRALNRLQLCTTLYQAPTRDEDRATMAIEQAKKAMPKDSVRKKRALLVNAGLALAPDTFQIVLDSENEAKVSVGKTRGRFTYLFAKARHHTLSVDKAVGHLRRLGGQNDKERIHIWAELAKVARKQNVWDVCRTASRFCLLYDSVKVKKLAKFKRGKKKKGWDGLGRDSWGHSEAALQKQVSPTLLRKFAEVGFISAEATVHLLQSEGVQLNDQPTPPEDVSQHPTGYIPECPEDNAEWIMYRSWVEGLSQYAMNCWLRSADIGQEIQEPWIVQNAVVYVLNHNHHLIKAGRQRELLDALYHLLGIMKAVGHSGDPLLLVALCSALARGLIIRWIPALVPEKARKQARSNPLHTPLDPEAASEVRAAVEICEFALNLTNGMEPEEVVPVSARQQLIATWVKGKQLLQQQIGPRLGTEEQSTNEDINCMTRVLVALEMYSCSGLGLMDFTVPPLAQLVKMASECTWSDLLVELQTLMRLTHFTYMARDHEATMACSQKAIQMGIKYLRTFNPVEVQLLAEMLSSVACIQGRSIMENLKGRKQLRLAAAKAFIESARFAGIAGSPALVMLAARHFWNTWLPLLSSAGSRKKCKSATQRLISIINKTEAGKQEKGGTLLLHQWPTADFQSGGMTEGSFLPGTEDDLSLRAALYGLLFHSHADQGDWEGGLKVLDEAMQVLPRTAHRLLIFKHMVIVKAKLGQSFLMEIQKFRDQSEEYLAHMWQRLALNSKSVHGELTCHHNAIQALQKPESQWQKVDYIMEFSEWLYYRQFPLEDVVFHLKWAIDILLRMHPVGRVPEPQVSPLGAVEGPGDPGPPSLQELQSVRQLETLARAYTLLALVVSPGGAGHQDYCLEAYAFLHRIWQVSFSTAGKSSSESRISAVASSHLLLPKKEKEKSRDRDKDKIRDKDKGRDPKQFQSPAPGKCLEDLPSSLEEWASYACPEEVISVFRQDQSDFTINSSTIQKPTYSLYYVDRLVEALQKMSLHELAVPALQLGALIAASVVESKSLKDLYHLRLALACSELRLREAATYHEEVVGQAYICDVEQASCRKEIALKKEKNKEPLLEESLPTLTEPPASAPQAEMKPLVAQDKILKVNEETGKGLDGTSFPLLWTLKAEVLLEMDLYQPARLLLSEAYLAFQELGDPLAQARCLHLLAQLANKEKKHGQAQRMVEQAQRLGGSEEFWYQSTLTLADTLLSAEGERRETLVCKLFQKLIDTFNVLKKERPNRMPILEFLTTDLEARCVNLQIKAVQEQLDRDPLQNLFLTLEIDSRLLEVEEKFVSIGRKEKCMDIQLERARLKRLCALSEKYEERRTAWYLEAYDLAQRAVAGAVDLFLSVQSLLSLHDLQNVSSPLMRRLRHLRLSLVEGCLDTLQLIWEDARKRRLEQSSTDKLLSDFLQSPSDYTAVGLKWFNLKHSLAHEVLAQLGSLQSLSADCEEPHPRLLGLAGKALHLLAENWDLLHPACYWEESLWTQGSPN…
SIO_010081: CFAP46
subclass of: SO_0000673
so part of: CFAP46
location: join(639260..639308,639689..639981,640129..640260,640715..640779,641621..641785,642757..642880,643312..643406,644325..644435,647042..647141,653992..654090,655720..655910,661868..662096,662191..662311,662919..663042,663166..663296,663808..663935,664784..664917,666123..666335,667219..667384,669145..669294,670506..670613,674055..674221,681988..682119,682444..682606,684215..684299,687578..687716,688406..688589,691685..691840,692667..692861,694114..694269,694870..695019,696786..696934,697775..697873,698724..698856,699513..699659,701074..701274,701358..701464,702555..702731,703419..703554,710482..710670,711315..711503,712400..712450,712818..712949,713037..713216,713638..713808,718495..718592,719009..719085,719719..719849,720036..720160,720884..720972,721517..721678,728848..728918,729040..729100,729170..729205,729651..729753,730329..730441,731138..731219,731750..731886,731985..732065,732865..732989)
location: region:639260-732989:1
so has part: feature:639260-639308:1:exon
so has part: feature:639689-639981:1:exon
so has part: feature:640129-640260:1:exon
so has part: feature:640715-640779:1:exon
so has part: feature:641621-641785:1:exon
so has part: feature:642757-642880:1:exon
so has part: feature:643312-643406:1:exon
so has part: feature:644325-644435:1:exon
so has part: feature:647042-647141:1:exon
so has part: feature:653992-654090:1:exon
so has part: feature:655720-655910:1:exon
so has part: feature:661868-662096:1:exon
so has part: feature:662191-662311:1:exon
so has part: feature:662919-663042:1:exon
so has part: feature:663166-663296:1:exon
so has part: feature:663808-663935:1:exon
so has part: feature:664784-664917:1:exon
so has part: feature:666123-666335:1:exon
so has part: feature:667219-667384:1:exon
so has part: feature:669145-669294:1:exon
so has part: feature:670506-670613:1:exon
so has part: feature:674055-674221:1:exon
so has part: feature:681988-682119:1:exon
so has part: feature:682444-682606:1:exon
so has part: feature:684215-684299:1:exon
so has part: feature:687578-687716:1:exon
so has part: feature:688406-688589:1:exon
so has part: feature:691685-691840:1:exon
so has part: feature:692667-692861:1:exon
so has part: feature:694114-694269:1:exon
so has part: feature:694870-695019:1:exon
so has part: feature:696786-696934:1:exon
so has part: feature:697775-697873:1:exon
so has part: feature:698724-698856:1:exon
so has part: feature:699513-699659:1:exon
so has part: feature:701074-701274:1:exon
so has part: feature:701358-701464:1:exon
so has part: feature:702555-702731:1:exon
so has part: feature:703419-703554:1:exon
so has part: feature:710482-710670:1:exon
so has part: feature:711315-711503:1:exon
so has part: feature:712400-712450:1:exon
so has part: feature:712818-712949:1:exon
so has part: feature:713037-713216:1:exon
so has part: feature:713638-713808:1:exon
so has part: feature:718495-718592:1:exon
so has part: feature:719009-719085:1:exon
so has part: feature:719719-719849:1:exon
so has part: feature:720036-720160:1:exon
so has part: feature:720884-720972:1:exon
so has part: feature:721517-721678:1:exon
so has part: feature:728848-728918:1:exon
so has part: feature:729040-729100:1:exon
so has part: feature:729170-729205:1:exon
so has part: feature:729651-729753:1:exon
so has part: feature:730329-730441:1:exon
so has part: feature:731138-731219:1:exon
so has part: feature:731750-731886:1:exon
so has part: feature:731985-732065:1:exon
so has part: feature:732865-732989:1:exon

XP_017896588.1
type: Protein
SIO_000068: ncbiprotein

position:732989:1
position: 732989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639260-639308:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639689-639981:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640129-640260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:640715-640779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:641621-641785:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642757-642880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:643312-643406:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:644325-644435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:647042-647141:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:653992-654090:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:655720-655910:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:661868-662096:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:662191-662311:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:662919-663042:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:663166-663296:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:663808-663935:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:664784-664917:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:666123-666335:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:667219-667384:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:669145-669294:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:670506-670613:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:674055-674221:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:681988-682119:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:682444-682606:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:684215-684299:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:687578-687716:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:688406-688589:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:691685-691840:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:692667-692861:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:694114-694269:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:694870-695019:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:696786-696934:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:697775-697873:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:698724-698856:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:699513-699659:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:701074-701274:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:701358-701464:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:702555-702731:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:703419-703554:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:710482-710670:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:711315-711503:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:712400-712450:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:712818-712949:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:713037-713216:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:713638-713808:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:718495-718592:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:719009-719085:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:719719-719849:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:720036-720160:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:720884-720972:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:721517-721678:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:728848-728918:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:729040-729100:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:729170-729205:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:729651-729753:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:730329-730441:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:731138-731219:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:731750-731886:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:731985-732065:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:732865-732989:1:exon

LOC108634002
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 740648..747917
location: region:740648-747917:1
so has part: feature:740648-747917:1:exon
subclass of: SO_0000010

108634002
type: Gene
SIO_000068: ncbigene

position:740648:1
position: 740648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747917:1
position: 747917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740648-747917:1:exon

LOC108634002
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC108634002
product: uncharacterized LOC108634002
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018041100.1
SIO_010081: LOC108634002
subclass of: SO_0000673
so part of: LOC108634002
location: join(740648..740653,744309..744696,746533..746672,746928..747236,747346..747917)
location: region:740648-747917:1
so has part: feature:740648-740653:1:exon
so has part: feature:744309-744696:1:exon
so has part: feature:746533-746672:1:exon
so has part: feature:746928-747236:1:exon
so has part: feature:747346-747917:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:740648-740653:1:exon

position:740653:1
position: 740653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744309-744696:1:exon

position:744309:1
position: 744309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744696:1
position: 744696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:746533-746672:1:exon

position:746533:1
position: 746533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746672:1
position: 746672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:746928-747236:1:exon

position:746928:1
position: 746928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747236:1
position: 747236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:747346-747917:1:exon

position:747346:1
position: 747346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108634002
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC108634002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC108634002
translation: MARRFNTDLGKRGRSGLSARPRPRRERGQGERQCSPPPRPTTAAGLDTAQLDPHPPASPHGIQSSLERSQKPFRKRPLGQRCPSHSGSAANRLQPLPSHKSCARRPISALGTRSDPRESSPGERPLRDCTSARCRPDGRCISEEGLRAYQAESEPQDDESQRTVVQGVVEGRAAAEGPSPCWWRWGSAERSGQGFFQLPFQGRPGEGTSGTGRGPVFPGLDVCGGEWGSRPPSSLQRLQNLGAPAAAQAPSRRPLRLQGPHASTPAPPAGRHLVLLTHQPLEAIERVCLGQGAAPRLTSLSKWKIFIRLPTPELSAWRWDPSSFQRQTLFLPSVPRPHACQALTQSGLGHRLVLAGPPEGPPSLTSLFPAVTRPIPMLHGLAGFCLMLKRAAEDEMVGWHHPLNGHESEQLADRGAEPAAAHGAAKSPTTWRLNNTQSCPPGCRVALAVHVALPERAWQGA
SIO_010081: LOC108634002
subclass of: SO_0000673
so part of: LOC108634002
location: join(740648..740653,744309..744696,746533..746672,746928..747236,747346..747888)
location: region:740648-747888:1
so has part: feature:740648-740653:1:exon
so has part: feature:744309-744696:1:exon
so has part: feature:746533-746672:1:exon
so has part: feature:746928-747236:1:exon
so has part: feature:747346-747888:1:exon

XP_017896589.1
type: Protein
SIO_000068: ncbiprotein

position:747888:1
position: 747888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740648-740653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744309-744696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:746533-746672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746928-747236:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:747346-747888:1:exon

INPP5A
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: INPP5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(753773..904610)
location: region:753773-904610:-1
so has part: feature:753773-904610:-1:exon
subclass of: SO_0000010

102181924
type: Gene
SIO_000068: ncbigene

position:753773:-1
position: 753773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904610:-1
position: 904610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753773-904610:-1:exon

INPP5A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: INPP5A
product: inositol polyphosphate-5-phosphatase A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_018041258.1
SIO_010081: INPP5A
subclass of: SO_0000673
so part of: INPP5A
location: complement(join(753773..755140,755279..755315,756046..756114,758529..758640,764993..765066,769500..769574,769740..769835,780180..780264,788553..788672,789852..789904,794519..794622,803238..803301,828224..828311,831279..831379,850785..850826,904262..904610))
location: region:753773-904610:-1
so has part: feature:904262-904610:-1:exon
so has part: feature:850785-850826:-1:exon
so has part: feature:831279-831379:-1:exon
so has part: feature:828224-828311:-1:exon
so has part: feature:803238-803301:-1:exon
so has part: feature:794519-794622:-1:exon
so has part: feature:789852-789904:-1:exon
so has part: feature:788553-788672:-1:exon
so has part: feature:780180-780264:-1:exon
so has part: feature:769740-769835:-1:exon
so has part: feature:769500-769574:-1:exon
so has part: feature:764993-765066:-1:exon
so has part: feature:758529-758640:-1:exon
so has part: feature:756046-756114:-1:exon
so has part: feature:755279-755315:-1:exon
so has part: feature:753773-755140:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:904262-904610:-1:exon

position:904262:-1
position: 904262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:850785-850826:-1:exon

position:850785:-1
position: 850785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850826:-1
position: 850826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:831279-831379:-1:exon

position:831279:-1
position: 831279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831379:-1
position: 831379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:828224-828311:-1:exon

position:828224:-1
position: 828224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828311:-1
position: 828311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:803238-803301:-1:exon

position:803238:-1
position: 803238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803301:-1
position: 803301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:794519-794622:-1:exon

position:794519:-1
position: 794519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794622:-1
position: 794622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:789852-789904:-1:exon

position:789852:-1
position: 789852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789904:-1
position: 789904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:788553-788672:-1:exon

position:788553:-1
position: 788553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788672:-1
position: 788672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:780180-780264:-1:exon

position:780180:-1
position: 780180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780264:-1
position: 780264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:769740-769835:-1:exon

position:769740:-1
position: 769740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769835:-1
position: 769835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:769500-769574:-1:exon

position:769500:-1
position: 769500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769574:-1
position: 769574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:764993-765066:-1:exon

position:764993:-1
position: 764993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765066:-1
position: 765066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:758529-758640:-1:exon

position:758529:-1
position: 758529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758640:-1
position: 758640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:756046-756114:-1:exon

position:756046:-1
position: 756046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756114:-1
position: 756114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:755279-755315:-1:exon

position:755279:-1
position: 755279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755315:-1
position: 755315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:753773-755140:-1:exon

position:755140:-1
position: 755140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

INPP5A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: INPP5A
product: inositol polyphosphate-5-phosphatase A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 40 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_018041259.1
SIO_010081: INPP5A
subclass of: SO_0000673
so part of: INPP5A
location: complement(join(753773..755140,755228..755315,756046..756114,758529..758640,764993..765066,769500..769574,769740..769835,780180..780264,788553..788672,789852..789904,794519..794622,803238..803301,828224..828311,831279..831379,850785..850826,904262..904608))
location: region:753773-904608:-1
so has part: feature:904262-904608:-1:exon
so has part: feature:850785-850826:-1:exon
so has part: feature:831279-831379:-1:exon
so has part: feature:828224-828311:-1:exon
so has part: feature:803238-803301:-1:exon
so has part: feature:794519-794622:-1:exon
so has part: feature:789852-789904:-1:exon
so has part: feature:788553-788672:-1:exon
so has part: feature:780180-780264:-1:exon
so has part: feature:769740-769835:-1:exon
so has part: feature:769500-769574:-1:exon
so has part: feature:764993-765066:-1:exon
so has part: feature:758529-758640:-1:exon
so has part: feature:756046-756114:-1:exon
so has part: feature:755228-755315:-1:exon
so has part: feature:753773-755140:-1:exon

position:904608:-1
position: 904608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904262-904608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:850785-850826:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831279-831379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828224-828311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803238-803301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:794519-794622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:789852-789904:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:788553-788672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:780180-780264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:769740-769835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:769500-769574:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:764993-765066:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:758529-758640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:756046-756114:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:755228-755315:-1:exon

position:755228:-1
position: 755228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:753773-755140:-1:exon

INPP5A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: INPP5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type I inositol 1,4,5-trisphosphate 5-phosphatase isoform X1
translation: MAGKAAAPGTAVLLVTANVGSLFDDPENLQRNWLREFYQVVHAHRPHFLALHCQEFGGKNYEASMSHVDKFVKELLSSDAMKEYSRARVYLDENYKSQEQFTALGSFYFLHESLKNIYQFDFKAKKFKKVTGKEIYSDTLESTPMLEKEKFPQDYFPECKWSRKGFLRTRWCLADCAFDLVNIHLFHDASNLVAWETSPSVYSGIRHKALGYVLDRIVDHRFEKASYFVFGDFNFRLDSKSVVETLCTKATMQTVRAADTNEVVKLIFRESDNDRKVMLQLEKKLFDYFNQEVFRDDNGTALLEFDKELSVFKDRLHELDISFPPSYPYSEDCSQGRQYMNTRCPAWCDRVLMSPSAKELVLRSESEEKVVTYDHIGPNVCMGDHKPVFLAFRIAPGAGRRCQRLEGTPGETPP
SIO_010081: INPP5A
subclass of: SO_0000673
so part of: INPP5A
location: complement(join(755091..755140,755279..755315,756046..756114,758529..758640,764993..765066,769500..769574,769740..769835,780180..780264,788553..788672,789852..789904,794519..794622,803238..803301,828224..828311,831279..831379,850785..850826,904262..904336))
location: region:755091-904336:-1
so has part: feature:904262-904336:-1:exon
so has part: feature:850785-850826:-1:exon
so has part: feature:831279-831379:-1:exon
so has part: feature:828224-828311:-1:exon
so has part: feature:803238-803301:-1:exon
so has part: feature:794519-794622:-1:exon
so has part: feature:789852-789904:-1:exon
so has part: feature:788553-788672:-1:exon
so has part: feature:780180-780264:-1:exon
so has part: feature:769740-769835:-1:exon
so has part: feature:769500-769574:-1:exon
so has part: feature:764993-765066:-1:exon
so has part: feature:758529-758640:-1:exon
so has part: feature:756046-756114:-1:exon
so has part: feature:755279-755315:-1:exon
so has part: feature:755091-755140:-1:exon

XP_017896747.1
type: Protein
SIO_000068: ncbiprotein

position:755091:-1
position: 755091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904336:-1
position: 904336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904262-904336:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:850785-850826:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831279-831379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828224-828311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803238-803301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:794519-794622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:789852-789904:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:788553-788672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:780180-780264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:769740-769835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:769500-769574:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:764993-765066:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:758529-758640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:756046-756114:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:755279-755315:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:755091-755140:-1:exon

INPP5A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: INPP5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type I inositol 1,4,5-trisphosphate 5-phosphatase isoform X2
translation: MAGKAAAPGTAVLLVTANVGSLFDDPENLQRNWLREFYQVVHAHRPHFLALHCQEFGGKNYEASMSHVDKFVKELLSSDAMKEYSRARVYLDENYKSQEQFTALGSFYFLHESLKNIYQFDFKAKKFKKVTGKEIYSDTLESTPMLEKEKFPQDYFPECKWSRKGFLRTRWCLADCAFDLVNIHLFHDASNLVAWETSPSVYSGIRHKALGYVLDRIVDHRFEKASYFVFGDFNFRLDSKSVVETLCTKATMQTVRAADTNEVVKLIFRESDNDRKVMLQLEKKLFDYFNQEVFRDDNGTALLEFDKELSVFKDRLHELDISFPPSYPYSEDCSQGRQYMNTRCPAWCDRVLMSPSAKELVLRSESEEKVVTYDHIGPNVCMGDHKPVFLAFRIAPGAGKPHARVPKCCVVQ
SIO_010081: INPP5A
subclass of: SO_0000673
so part of: INPP5A
location: complement(join(755235..755315,756046..756114,758529..758640,764993..765066,769500..769574,769740..769835,780180..780264,788553..788672,789852..789904,794519..794622,803238..803301,828224..828311,831279..831379,850785..850826,904262..904336))
location: region:755235-904336:-1
so has part: feature:904262-904336:-1:exon
so has part: feature:850785-850826:-1:exon
so has part: feature:831279-831379:-1:exon
so has part: feature:828224-828311:-1:exon
so has part: feature:803238-803301:-1:exon
so has part: feature:794519-794622:-1:exon
so has part: feature:789852-789904:-1:exon
so has part: feature:788553-788672:-1:exon
so has part: feature:780180-780264:-1:exon
so has part: feature:769740-769835:-1:exon
so has part: feature:769500-769574:-1:exon
so has part: feature:764993-765066:-1:exon
so has part: feature:758529-758640:-1:exon
so has part: feature:756046-756114:-1:exon
so has part: feature:755235-755315:-1:exon

XP_017896748.1
type: Protein
SIO_000068: ncbiprotein

position:755235:-1
position: 755235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904262-904336:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:850785-850826:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831279-831379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828224-828311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803238-803301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:794519-794622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:789852-789904:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:788553-788672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:780180-780264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:769740-769835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:769500-769574:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:764993-765066:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:758529-758640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:756046-756114:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:755235-755315:-1:exon

LOC102181650
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102181650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 917328..922013
location: region:917328-922013:1
so has part: feature:917328-922013:1:exon
subclass of: SO_0000011

102181650
type: Gene
SIO_000068: ncbigene

position:917328:1
position: 917328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922013:1
position: 922013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917328-922013:1:exon

LOC102181650
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102181650
product: uncharacterized LOC102181650
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_001917347.1
SIO_010081: LOC102181650
subclass of: SO_0000673
so part of: LOC102181650
location: join(917328..918084,918359..918426,919396..919468,921312..922013)
location: region:917328-922013:1
so has part: feature:917328-918084:1:exon
so has part: feature:918359-918426:1:exon
so has part: feature:919396-919468:1:exon
so has part: feature:921312-922013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:917328-918084:1:exon

position:918084:1
position: 918084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:918359-918426:1:exon

position:918359:1
position: 918359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918426:1
position: 918426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:919396-919468:1:exon

position:919396:1
position: 919396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919468:1
position: 919468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:921312-922013:1:exon

position:921312:1
position: 921312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108634003
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 955033..959650
location: region:955033-959650:1
so has part: feature:955033-959650:1:exon
subclass of: SO_0000010

108634003
type: Gene
SIO_000068: ncbigene

position:955033:1
position: 955033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959650:1
position: 959650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:955033-959650:1:exon

LOC108634003
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC108634003
product: vegetative cell wall protein gp1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_018041101.1
SIO_010081: LOC108634003
subclass of: SO_0000673
so part of: LOC108634003
location: join(955033..955238,955965..956102,957542..957686,957830..957956,958738..958908,959610..959650)
location: region:955033-959650:1
so has part: feature:955033-955238:1:exon
so has part: feature:955965-956102:1:exon
so has part: feature:957542-957686:1:exon
so has part: feature:957830-957956:1:exon
so has part: feature:958738-958908:1:exon
so has part: feature:959610-959650:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:955033-955238:1:exon

position:955238:1
position: 955238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:955965-956102:1:exon

position:955965:1
position: 955965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956102:1
position: 956102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:957542-957686:1:exon

position:957542:1
position: 957542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957686:1
position: 957686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:957830-957956:1:exon

position:957830:1
position: 957830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957956:1
position: 957956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:958738-958908:1:exon

position:958738:1
position: 958738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958908:1
position: 958908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:959610-959650:1:exon

position:959610:1
position: 959610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108634003
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC108634003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vegetative cell wall protein gp1-like
translation: MGLEGGAQPESTLRNGGSSMARPPAAWWPLRGSQTLSSNTLLLARGRPPPLCWVSALYAAAAVASSSGHHTICDPQPDAAGVSPELQPRVQRRVRPAERPGQVQSSPLLPEGRGSPWYPQPIIPPARGTPSPSSPSPAALTPQPVVPQPVAPQPIMPQPIVPPPVVLTSAFSPLGLHGSSGLSEPLPLRPAQGASSLAWVQQTCAGTERPLAGRARRVRGPAGLLAAALTGARCFLAGLSAAAPALVETGLPSHAVAPSSEPGLWGQAALQNRLF
SIO_010081: LOC108634003
subclass of: SO_0000673
so part of: LOC108634003
location: join(955033..955238,955965..956102,957542..957686,957830..957956,958738..958908,959610..959650)
location: region:955033-959650:1
so has part: feature:955033-955238:1:exon
so has part: feature:955965-956102:1:exon
so has part: feature:957542-957686:1:exon
so has part: feature:957830-957956:1:exon
so has part: feature:958738-958908:1:exon
so has part: feature:959610-959650:1:exon

XP_017896590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:955033-955238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:955965-956102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957542-957686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:957830-957956:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:958738-958908:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:959610-959650:1:exon

LOC108634006
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634006
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 971762..974104
location: region:971762-974104:1
so has part: feature:971762-974104:1:exon
subclass of: SO_0000011

108634006
type: Gene
SIO_000068: ncbigene

position:971762:1
position: 971762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974104:1
position: 974104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:971762-974104:1:exon

LOC108634006
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108634006
product: uncharacterized LOC108634006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001917301.1
SIO_010081: LOC108634006
subclass of: SO_0000673
so part of: LOC108634006
location: join(971762..972076,972214..973256,973642..974104)
location: region:971762-974104:1
so has part: feature:971762-972076:1:exon
so has part: feature:972214-973256:1:exon
so has part: feature:973642-974104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:971762-972076:1:exon

position:972076:1
position: 972076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972214-973256:1:exon

position:972214:1
position: 972214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973256:1
position: 973256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:973642-974104:1:exon

position:973642:1
position: 973642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PWWP2B
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: PWWP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(983260..1003612)
location: region:983260-1003612:-1
so has part: feature:983260-1003612:-1:exon
subclass of: SO_0000010

102181360
type: Gene
SIO_000068: ncbigene

position:983260:-1
position: 983260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003612:-1
position: 1003612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983260-1003612:-1:exon

PWWP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PWWP2B
product: PWWP domain containing 2B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_018041470.1
SIO_010081: PWWP2B
subclass of: SO_0000673
so part of: PWWP2B
location: complement(join(983260..983754,994660..995929,1003473..1003612))
location: region:983260-1003612:-1
so has part: feature:1003473-1003612:-1:exon
so has part: feature:994660-995929:-1:exon
so has part: feature:983260-983754:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1003473-1003612:-1:exon

position:1003473:-1
position: 1003473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:994660-995929:-1:exon

position:994660:-1
position: 994660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995929:-1
position: 995929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:983260-983754:-1:exon

position:983754:-1
position: 983754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PWWP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PWWP2B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: PWWP domain-containing protein 2B
translation: MEPRAGCRLPVRVEQVVNGALLVTASCGERSFAGILLDCTKKSGLFGLPPLAPLTQAQDAPVNGCHGPSPAEGDAEAMPLGTGPPAPAGGDGPPEPPPPLVPPLPAGSLPPFPPYFEGAPFPPPLWLRNTYRQWVPQPPPRGVKRTRRRLSRNRDPGRLALSPIRLRPRQVLCEKCKSTQSPPEASPGPPAAPXPRREPRKPEDADGGGDAAAAKRSRRERREEARAGVPRSPAIKISYSTPQGTGEVVEIPPRVHGSLEPFCPPPASPGGPDPEPPRDRPAAGAPASIPKLKLTRPLPPGASPPPPKIRLKPRRLGAGEQEPVYRAELVQELKGRGPPADGAAHHGGLADSPSASSGEDDDCKGCPRSAHGPDSAGLAFLAACPGRSGCTGELAWSDSLDESRSSGSDATLPDACDLSPGGGVPSSSKGMRPTVPPLTVRLHTQSVSKCVTEDGRTVAVGDIVWGHQR
SIO_010081: PWWP2B
subclass of: SO_0000673
so part of: PWWP2B
location: complement(join(983741..983754,994660..995929,1003473..1003597))
location: region:983741-1003597:-1
so has part: feature:1003473-1003597:-1:exon
so has part: feature:994660-995929:-1:exon
so has part: feature:983741-983754:-1:exon

XP_017896959.1
type: Protein
SIO_000068: ncbiprotein

position:983741:-1
position: 983741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003597:-1
position: 1003597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003473-1003597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:994660-995929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:983741-983754:-1:exon

LOC108634033
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108634033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(983979..992635)
location: region:983979-992635:-1
so has part: feature:983979-992635:-1:exon
subclass of: SO_0000011

108634033
type: Gene
SIO_000068: ncbigene

position:983979:-1
position: 983979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992635:-1
position: 992635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983979-992635:-1:exon

LOC108634033
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108634033
product: uncharacterized LOC108634033
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001917319.1
SIO_010081: LOC108634033
subclass of: SO_0000673
so part of: LOC108634033
location: complement(join(983979..985378,987046..987425,987514..992635))
location: region:983979-992635:-1
so has part: feature:987514-992635:-1:exon
so has part: feature:987046-987425:-1:exon
so has part: feature:983979-985378:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:987514-992635:-1:exon

position:987514:-1
position: 987514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:987046-987425:-1:exon

position:987046:-1
position: 987046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987425:-1
position: 987425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:983979-985378:-1:exon

position:985378:-1
position: 985378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRC27
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LRRC27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1027193..1054053)
location: region:1027193-1054053:-1
so has part: feature:1027193-1054053:-1:exon
subclass of: SO_0000010

102181095
type: Gene
SIO_000068: ncbigene

position:1027193:-1
position: 1027193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054053:-1
position: 1054053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1027193-1054053:-1:exon

LRRC27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LRRC27
product: leucine rich repeat containing 27, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018041673.1
SIO_010081: LRRC27
subclass of: SO_0000673
so part of: LRRC27
location: complement(join(1027193..1027828,1028391..1028520,1029412..1029509,1035064..1035145,1037784..1037927,1038944..1039307,1040979..1041131,1044619..1044677,1047007..1047137,1051036..1051293,1052836..1054053))
location: region:1027193-1054053:-1
so has part: feature:1052836-1054053:-1:exon
so has part: feature:1051036-1051293:-1:exon
so has part: feature:1047007-1047137:-1:exon
so has part: feature:1044619-1044677:-1:exon
so has part: feature:1040979-1041131:-1:exon
so has part: feature:1038944-1039307:-1:exon
so has part: feature:1037784-1037927:-1:exon
so has part: feature:1035064-1035145:-1:exon
so has part: feature:1029412-1029509:-1:exon
so has part: feature:1028391-1028520:-1:exon
so has part: feature:1027193-1027828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052836-1054053:-1:exon

position:1052836:-1
position: 1052836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1051036-1051293:-1:exon

position:1051036:-1
position: 1051036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051293:-1
position: 1051293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1047007-1047137:-1:exon

position:1047007:-1
position: 1047007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047137:-1
position: 1047137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1044619-1044677:-1:exon

position:1044619:-1
position: 1044619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044677:-1
position: 1044677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1040979-1041131:-1:exon

position:1040979:-1
position: 1040979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041131:-1
position: 1041131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1038944-1039307:-1:exon

position:1038944:-1
position: 1038944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039307:-1
position: 1039307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1037784-1037927:-1:exon

position:1037784:-1
position: 1037784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037927:-1
position: 1037927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1035064-1035145:-1:exon

position:1035064:-1
position: 1035064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035145:-1
position: 1035145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1029412-1029509:-1:exon

position:1029412:-1
position: 1029412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029509:-1
position: 1029509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1028391-1028520:-1:exon

position:1028391:-1
position: 1028391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028520:-1
position: 1028520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1027193-1027828:-1:exon

position:1027828:-1
position: 1027828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRC27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LRRC27
product: leucine rich repeat containing 27, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018041672.1
SIO_010081: LRRC27
subclass of: SO_0000673
so part of: LRRC27
location: complement(join(1027193..1027828,1028391..1028520,1029412..1029509,1035064..1035145,1037784..1037927,1038944..1039307,1040979..1041131,1044619..1044677,1047007..1047137,1051036..1051293,1052119..1054053))
location: region:1027193-1054053:-1
so has part: feature:1052119-1054053:-1:exon
so has part: feature:1051036-1051293:-1:exon
so has part: feature:1047007-1047137:-1:exon
so has part: feature:1044619-1044677:-1:exon
so has part: feature:1040979-1041131:-1:exon
so has part: feature:1038944-1039307:-1:exon
so has part: feature:1037784-1037927:-1:exon
so has part: feature:1035064-1035145:-1:exon
so has part: feature:1029412-1029509:-1:exon
so has part: feature:1028391-1028520:-1:exon
so has part: feature:1027193-1027828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052119-1054053:-1:exon

position:1052119:-1
position: 1052119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1051036-1051293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1047007-1047137:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1044619-1044677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1040979-1041131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1038944-1039307:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037784-1037927:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1035064-1035145:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029412-1029509:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1028391-1028520:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1027193-1027828:-1:exon

LRRC27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LRRC27
product: leucine rich repeat containing 27, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041674.1
SIO_010081: LRRC27
subclass of: SO_0000673
so part of: LRRC27
location: complement(join(1027193..1027828,1028391..1028520,1029412..1029509,1035064..1035145,1037784..1037927,1038944..1039307,1040979..1041131,1044619..1044677,1047007..1047137,1047272..1050505,1051036..1051293,1052119..1052200))
location: region:1027193-1052200:-1
so has part: feature:1052119-1052200:-1:exon
so has part: feature:1051036-1051293:-1:exon
so has part: feature:1047272-1050505:-1:exon
so has part: feature:1047007-1047137:-1:exon
so has part: feature:1044619-1044677:-1:exon
so has part: feature:1040979-1041131:-1:exon
so has part: feature:1038944-1039307:-1:exon
so has part: feature:1037784-1037927:-1:exon
so has part: feature:1035064-1035145:-1:exon
so has part: feature:1029412-1029509:-1:exon
so has part: feature:1028391-1028520:-1:exon
so has part: feature:1027193-1027828:-1:exon

position:1052200:-1
position: 1052200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052119-1052200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1051036-1051293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1047272-1050505:-1:exon

position:1047272:-1
position: 1047272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050505:-1
position: 1050505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1047007-1047137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1044619-1044677:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1040979-1041131:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1038944-1039307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1037784-1037927:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1035064-1035145:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029412-1029509:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028391-1028520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1027193-1027828:-1:exon

LRRC27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LRRC27
product: leucine rich repeat containing 27, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041675.1
SIO_010081: LRRC27
subclass of: SO_0000673
so part of: LRRC27
location: complement(join(1027193..1027828,1028391..1028520,1029412..1029509,1035064..1035145,1037784..1037927,1038944..1039307,1040979..1041131,1044619..1044677,1047007..1047137,1047272..1050286,1051036..1051128))
location: region:1027193-1051128:-1
so has part: feature:1051036-1051128:-1:exon
so has part: feature:1047272-1050286:-1:exon
so has part: feature:1047007-1047137:-1:exon
so has part: feature:1044619-1044677:-1:exon
so has part: feature:1040979-1041131:-1:exon
so has part: feature:1038944-1039307:-1:exon
so has part: feature:1037784-1037927:-1:exon
so has part: feature:1035064-1035145:-1:exon
so has part: feature:1029412-1029509:-1:exon
so has part: feature:1028391-1028520:-1:exon
so has part: feature:1027193-1027828:-1:exon

position:1051128:-1
position: 1051128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051036-1051128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1047272-1050286:-1:exon

position:1050286:-1
position: 1050286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1047007-1047137:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1044619-1044677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1040979-1041131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1038944-1039307:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037784-1037927:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1035064-1035145:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029412-1029509:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1028391-1028520:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1027193-1027828:-1:exon

LRRC27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LRRC27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 27 isoform X1
translation: MTTACASCLRTAASPWRPRAPAASMLRCALRAPGGRVTPHPGCAVVPRGVLPPGRLMEGSGSLSVPCGAGDLESPAGQAGSKPASASRDVHQGVIFSSSAILDLSQSGLHHLGEIFTVPNLRQLHLQRNALSTIPKDFFQLLPNLSWLDLRFNRITALPSGIGCHKHLKTLLLERNPIRMLPVELGSVTTLKALSLRHCPLEFPPPLVVQRGLVAILTFLQICVAEHAAPRDGSPQVKKMTVRDLPQPLLDLPEERVPNQETVRSQAPKGSAVTGKAGFSPPVGTLEPHEPGRPPEPPEDWPSEDEIRRFWKLRQEIVETEQAGALGSQLLPAELPPSLRAALSSGRKPLPHPRPVCRMKMPSFQGVLPELDSTRQALVRASQLGESRGLALRELRERQAQEQSRRDKRALQEWREHAQVRRRRPEEPPRRSPGAAKIAFATDPRGNEKVPKNPPGRVKQSKEKPLGLQGQILEETLKPQAQQLQARRSRFQGLAPLEDVGRAARDVQMARRLHDEVLKLKLRSALNRNHRCAALPGSLSLRPAVSRPQNIFFNPKY
SIO_010081: LRRC27
subclass of: SO_0000673
so part of: LRRC27
location: complement(join(1027682..1027828,1028391..1028520,1029412..1029509,1035064..1035145,1037784..1037927,1038944..1039307,1040979..1041131,1044619..1044677,1047007..1047137,1051036..1051293,1052119..1052226))
location: region:1027682-1052226:-1
so has part: feature:1052119-1052226:-1:exon
so has part: feature:1051036-1051293:-1:exon
so has part: feature:1047007-1047137:-1:exon
so has part: feature:1044619-1044677:-1:exon
so has part: feature:1040979-1041131:-1:exon
so has part: feature:1038944-1039307:-1:exon
so has part: feature:1037784-1037927:-1:exon
so has part: feature:1035064-1035145:-1:exon
so has part: feature:1029412-1029509:-1:exon
so has part: feature:1028391-1028520:-1:exon
so has part: feature:1027682-1027828:-1:exon

XP_017897161.1
type: Protein
SIO_000068: ncbiprotein

position:1027682:-1
position: 1027682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052226:-1
position: 1052226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052119-1052226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1051036-1051293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1047007-1047137:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1044619-1044677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1040979-1041131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1038944-1039307:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1037784-1037927:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1035064-1035145:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029412-1029509:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1028391-1028520:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1027682-1027828:-1:exon

LRRC27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LRRC27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 27 isoform X2
translation: MEGSGSLSVPCGAGDLESPAGQAGSKPASASRDVHQGVIFSSSAILDLSQSGLHHLGEIFTVPNLRQLHLQRNALSTIPKDFFQLLPNLSWLDLRFNRITALPSGIGCHKHLKTLLLERNPIRMLPVELGSVTTLKALSLRHCPLEFPPPLVVQRGLVAILTFLQICVAEHAAPRDGSPQVKKMTVRDLPQPLLDLPEERVPNQETVRSQAPKGSAVTGKAGFSPPVGTLEPHEPGRPPEPPEDWPSEDEIRRFWKLRQEIVETEQAGALGSQLLPAELPPSLRAALSSGRKPLPHPRPVCRMKMPSFQGVLPELDSTRQALVRASQLGESRGLALRELRERQAQEQSRRDKRALQEWREHAQVRRRRPEEPPRRSPGAAKIAFATDPRGNEKVPKNPPGRVKQSKEKPLGLQGQILEETLKPQAQQLQARRSRFQGLAPLEDVGRAARDVQMARRLHDEVLKLKLRSALNRNHRCAALPGSLSLRPAVSRPQNIFFNPKY
SIO_010081: LRRC27
subclass of: SO_0000673
so part of: LRRC27
location: complement(join(1027682..1027828,1028391..1028520,1029412..1029509,1035064..1035145,1037784..1037927,1038944..1039307,1040979..1041131,1044619..1044677,1047007..1047137,1051036..1051233))
location: region:1027682-1051233:-1
so has part: feature:1051036-1051233:-1:exon
so has part: feature:1047007-1047137:-1:exon
so has part: feature:1044619-1044677:-1:exon
so has part: feature:1040979-1041131:-1:exon
so has part: feature:1038944-1039307:-1:exon
so has part: feature:1037784-1037927:-1:exon
so has part: feature:1035064-1035145:-1:exon
so has part: feature:1029412-1029509:-1:exon
so has part: feature:1028391-1028520:-1:exon
so has part: feature:1027682-1027828:-1:exon

XP_017897162.1
type: Protein
SIO_000068: ncbiprotein

position:1051233:-1
position: 1051233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051036-1051233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1047007-1047137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044619-1044677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1040979-1041131:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1038944-1039307:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1037784-1037927:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035064-1035145:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029412-1029509:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1028391-1028520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1027682-1027828:-1:exon

LRRC27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LRRC27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 27 isoform X3
translation: MLSPWTTREAPRPRLSAAGVSRFNDFWRNIQQLHLQRNALSTIPKDFFQLLPNLSWLDLRFNRITALPSGIGCHKHLKTLLLERNPIRMLPVELGSVTTLKALSLRHCPLEFPPPLVVQRGLVAILTFLQICVAEHAAPRDGSPQVKKMTVRDLPQPLLDLPEERVPNQETVRSQAPKGSAVTGKAGFSPPVGTLEPHEPGRPPEPPEDWPSEDEIRRFWKLRQEIVETEQAGALGSQLLPAELPPSLRAALSSGRKPLPHPRPVCRMKMPSFQGVLPELDSTRQALVRASQLGESRGLALRELRERQAQEQSRRDKRALQEWREHAQVRRRRPEEPPRRSPGAAKIAFATDPRGNEKVPKNPPGRVKQSKEKPLGLQGQILEETLKPQAQQLQARRSRFQGLAPLEDVGRAARDVQMARRLHDEVLKLKLRSALNRNHRCAALPGSLSLRPAVSRPQNIFFNPKY
SIO_010081: LRRC27
subclass of: SO_0000673
so part of: LRRC27
location: complement(join(1027682..1027828,1028391..1028520,1029412..1029509,1035064..1035145,1037784..1037927,1038944..1039307,1040979..1041131,1044619..1044677,1047007..1047137,1047272..1047364))
location: region:1027682-1047364:-1
so has part: feature:1047272-1047364:-1:exon
so has part: feature:1047007-1047137:-1:exon
so has part: feature:1044619-1044677:-1:exon
so has part: feature:1040979-1041131:-1:exon
so has part: feature:1038944-1039307:-1:exon
so has part: feature:1037784-1037927:-1:exon
so has part: feature:1035064-1035145:-1:exon
so has part: feature:1029412-1029509:-1:exon
so has part: feature:1028391-1028520:-1:exon
so has part: feature:1027682-1027828:-1:exon

XP_017897163.1
type: Protein
SIO_000068: ncbiprotein

position:1047364:-1
position: 1047364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1047272-1047364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1047007-1047137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044619-1044677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1040979-1041131:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1038944-1039307:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1037784-1037927:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035064-1035145:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029412-1029509:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1028391-1028520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1027682-1027828:-1:exon

LRRC27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LRRC27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 27 isoform X3
translation: MLSPWTTREAPRPRLSAAGVSRFNDFWRNIQQLHLQRNALSTIPKDFFQLLPNLSWLDLRFNRITALPSGIGCHKHLKTLLLERNPIRMLPVELGSVTTLKALSLRHCPLEFPPPLVVQRGLVAILTFLQICVAEHAAPRDGSPQVKKMTVRDLPQPLLDLPEERVPNQETVRSQAPKGSAVTGKAGFSPPVGTLEPHEPGRPPEPPEDWPSEDEIRRFWKLRQEIVETEQAGALGSQLLPAELPPSLRAALSSGRKPLPHPRPVCRMKMPSFQGVLPELDSTRQALVRASQLGESRGLALRELRERQAQEQSRRDKRALQEWREHAQVRRRRPEEPPRRSPGAAKIAFATDPRGNEKVPKNPPGRVKQSKEKPLGLQGQILEETLKPQAQQLQARRSRFQGLAPLEDVGRAARDVQMARRLHDEVLKLKLRSALNRNHRCAALPGSLSLRPAVSRPQNIFFNPKY
SIO_010081: LRRC27
subclass of: SO_0000673
so part of: LRRC27
location: complement(join(1027682..1027828,1028391..1028520,1029412..1029509,1035064..1035145,1037784..1037927,1038944..1039307,1040979..1041131,1044619..1044677,1047007..1047137,1047272..1047364))
location: region:1027682-1047364:-1
so has part: feature:1047272-1047364:-1:exon
so has part: feature:1047007-1047137:-1:exon
so has part: feature:1044619-1044677:-1:exon
so has part: feature:1040979-1041131:-1:exon
so has part: feature:1038944-1039307:-1:exon
so has part: feature:1037784-1037927:-1:exon
so has part: feature:1035064-1035145:-1:exon
so has part: feature:1029412-1029509:-1:exon
so has part: feature:1028391-1028520:-1:exon
so has part: feature:1027682-1027828:-1:exon

XP_017897164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1047272-1047364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1047007-1047137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044619-1044677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1040979-1041131:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1038944-1039307:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1037784-1037927:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035064-1035145:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029412-1029509:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1028391-1028520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1027682-1027828:-1:exon

STK32C
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: STK32C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1057855..1132240
location: region:1057855-1132240:1
so has part: feature:1057855-1132240:1:exon
subclass of: SO_0000010

102173740
type: Gene
SIO_000068: ncbigene

position:1057855:1
position: 1057855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132240:1
position: 1132240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057855-1132240:1:exon

STK32C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: STK32C
product: serine/threonine kinase 32C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018041608.1
SIO_010081: STK32C
subclass of: SO_0000673
so part of: STK32C
location: join(1057855..1058266,1100320..1100375,1119419..1119570,1120133..1120306,1121065..1121102,1121210..1121299,1122058..1122161,1122704..1122820,1123883..1124008,1124082..1124213,1130675..1130742,1131593..1132240)
location: region:1057855-1132240:1
so has part: feature:1057855-1058266:1:exon
so has part: feature:1100320-1100375:1:exon
so has part: feature:1119419-1119570:1:exon
so has part: feature:1120133-1120306:1:exon
so has part: feature:1121065-1121102:1:exon
so has part: feature:1121210-1121299:1:exon
so has part: feature:1122058-1122161:1:exon
so has part: feature:1122704-1122820:1:exon
so has part: feature:1123883-1124008:1:exon
so has part: feature:1124082-1124213:1:exon
so has part: feature:1130675-1130742:1:exon
so has part: feature:1131593-1132240:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057855-1058266:1:exon

position:1058266:1
position: 1058266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1100320-1100375:1:exon

position:1100320:1
position: 1100320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100375:1
position: 1100375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1119419-1119570:1:exon

position:1119419:1
position: 1119419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119570:1
position: 1119570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1120133-1120306:1:exon

position:1120133:1
position: 1120133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120306:1
position: 1120306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1121065-1121102:1:exon

position:1121065:1
position: 1121065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121102:1
position: 1121102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1121210-1121299:1:exon

position:1121210:1
position: 1121210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121299:1
position: 1121299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1122058-1122161:1:exon

position:1122058:1
position: 1122058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122161:1
position: 1122161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1122704-1122820:1:exon

position:1122704:1
position: 1122704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122820:1
position: 1122820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1123883-1124008:1:exon

position:1123883:1
position: 1123883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124008:1
position: 1124008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1124082-1124213:1:exon

position:1124082:1
position: 1124082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124213:1
position: 1124213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1130675-1130742:1:exon

position:1130675:1
position: 1130675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130742:1
position: 1130742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1131593-1132240:1:exon

position:1131593:1
position: 1131593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STK32C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: STK32C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 32C
translation: MRSGAERRGSSAAASPGSPPLGRGRLAGPDAPPAPPPPAAGQPRARDSSDARAQPRPLFQWSKWKKRMGSSMSAAAARRPVFDDKEDVNLDHFQILRAIGKGSFGKVCIVQKRDTQKMYAMKYMSKQQCIERDEVRNVFRELEILQEIEHVFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVQFSEDAVRLYVCEMALALDYLRGQHIIHRDVKPDNILLDERGHAHLTDFNIATIIKDGERATALAGTKPYMAPEIFQSFVNGGTGYSFEVDWWSVGVMAYELLRGWRPYDIHSSSAAESLVQLFSTVSVQYVPAWSKETVALLRKLLTVNPKHRVSSLQDMRAAPALAGVLWAELSEKKVEPGFVPNKGRLHCDPTFELEEMILESRPLHKKKKRLAKSRSRDSSRDSCPSENDYLQDCLDAIQQDFVVFNREKLKRSQDPTPEPRDAAEALADSEGVRPALPACSAICPSAGSS
SIO_010081: STK32C
subclass of: SO_0000673
so part of: STK32C
location: join(1058005..1058266,1100320..1100375,1119419..1119570,1120133..1120306,1121065..1121102,1121210..1121299,1122058..1122161,1122704..1122820,1123883..1124008,1124082..1124213,1130675..1130742,1131593..1131719)
location: region:1058005-1131719:1
so has part: feature:1058005-1058266:1:exon
so has part: feature:1100320-1100375:1:exon
so has part: feature:1119419-1119570:1:exon
so has part: feature:1120133-1120306:1:exon
so has part: feature:1121065-1121102:1:exon
so has part: feature:1121210-1121299:1:exon
so has part: feature:1122058-1122161:1:exon
so has part: feature:1122704-1122820:1:exon
so has part: feature:1123883-1124008:1:exon
so has part: feature:1124082-1124213:1:exon
so has part: feature:1130675-1130742:1:exon
so has part: feature:1131593-1131719:1:exon

XP_017897097.1
type: Protein
SIO_000068: ncbiprotein

position:1058005:1
position: 1058005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131719:1
position: 1131719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058005-1058266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1100320-1100375:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1119419-1119570:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1120133-1120306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1121065-1121102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1121210-1121299:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1122058-1122161:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1122704-1122820:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1123883-1124008:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1124082-1124213:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1130675-1130742:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1131593-1131719:1:exon

DPYSL4
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: DPYSL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1133592..1148685)
location: region:1133592-1148685:-1
so has part: feature:1133592-1148685:-1:exon
subclass of: SO_0000010

102180563
type: Gene
SIO_000068: ncbigene

position:1133592:-1
position: 1133592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148685:-1
position: 1148685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133592-1148685:-1:exon

DPYSL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: DPYSL4
product: dihydropyrimidinase like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 12 ESTs, 23 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018041609.1
SIO_010081: DPYSL4
subclass of: SO_0000673
so part of: DPYSL4
location: complement(join(1133592..1134292,1134870..1135035,1135810..1135989,1136286..1136456,1137100..1137241,1137424..1137580,1138309..1138429,1138770..1138838,1140153..1140233,1140389..1140450,1142234..1142398,1144279..1144463,1145010..1145098,1148476..1148685))
location: region:1133592-1148685:-1
so has part: feature:1148476-1148685:-1:exon
so has part: feature:1145010-1145098:-1:exon
so has part: feature:1144279-1144463:-1:exon
so has part: feature:1142234-1142398:-1:exon
so has part: feature:1140389-1140450:-1:exon
so has part: feature:1140153-1140233:-1:exon
so has part: feature:1138770-1138838:-1:exon
so has part: feature:1138309-1138429:-1:exon
so has part: feature:1137424-1137580:-1:exon
so has part: feature:1137100-1137241:-1:exon
so has part: feature:1136286-1136456:-1:exon
so has part: feature:1135810-1135989:-1:exon
so has part: feature:1134870-1135035:-1:exon
so has part: feature:1133592-1134292:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1148476-1148685:-1:exon

position:1148476:-1
position: 1148476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1145010-1145098:-1:exon

position:1145010:-1
position: 1145010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145098:-1
position: 1145098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1144279-1144463:-1:exon

position:1144279:-1
position: 1144279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144463:-1
position: 1144463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1142234-1142398:-1:exon

position:1142234:-1
position: 1142234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142398:-1
position: 1142398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1140389-1140450:-1:exon

position:1140389:-1
position: 1140389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140450:-1
position: 1140450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1140153-1140233:-1:exon

position:1140153:-1
position: 1140153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140233:-1
position: 1140233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1138770-1138838:-1:exon

position:1138770:-1
position: 1138770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138838:-1
position: 1138838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1138309-1138429:-1:exon

position:1138309:-1
position: 1138309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138429:-1
position: 1138429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1137424-1137580:-1:exon

position:1137424:-1
position: 1137424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137580:-1
position: 1137580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1137100-1137241:-1:exon

position:1137100:-1
position: 1137100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137241:-1
position: 1137241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1136286-1136456:-1:exon

position:1136286:-1
position: 1136286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136456:-1
position: 1136456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1135810-1135989:-1:exon

position:1135810:-1
position: 1135810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135989:-1
position: 1135989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1134870-1135035:-1:exon

position:1134870:-1
position: 1134870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135035:-1
position: 1135035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1133592-1134292:-1:exon

position:1134292:-1
position: 1134292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DPYSL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: DPYSL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydropyrimidinase-related protein 4
translation: MSFQGKKSTPRITSDRLLIRGGKIVNDDQSFHADLYVEDGLIKQIGENLIVPGGIRTIDAHGLLVLPGGVDVHTRLLMPVLGMTPADDFCQGTKAALAGGTTMILDHVFPEAGVSLLAAYEQWRERADGGACCDYSLHVDIPRWHESTREELEALVRDKGVNSFLVFMAYKDKHQCTDGQMYEIFNVIRDLGAVAQVHAENGDIVDEEQKRLLELGITGPEGHVLSHPEEVEAEAVYRAVTIARQASCPLYVTKVMSKAAADVIARAKRRGVVVFGEPITASLGADGSHCWSKNWAKAAAFVTSPPISPDPSTADHLAALLSNGDLQVTGSAHCTFTTAQKAVGRDNFTLIPEGTNGVEERMAVVWEKCVASGQMDENEFVAVTSTNAAKIFNFYPRKGRVAVGSDADLVIWNPRATRIISAKTHSLNVEYNIFEGLECRGAPSVVISQGRVVLEDGALCVTPGTGRFIPRKTFPDFVYKRIKARNRLAEIHGVPRGLYDGPVHEVMAPTKPGAGAQARASCPGKISVPPFRNLHQSGFSLSGSQADDHIARRTAQKIMAPPGGRSHITSLS
SIO_010081: DPYSL4
subclass of: SO_0000673
so part of: DPYSL4
location: complement(join(1134201..1134292,1134870..1135035,1135810..1135989,1136286..1136456,1137100..1137241,1137424..1137580,1138309..1138429,1138770..1138838,1140153..1140233,1140389..1140450,1142234..1142398,1144279..1144463,1145010..1145098,1148476..1148514))
location: region:1134201-1148514:-1
so has part: feature:1148476-1148514:-1:exon
so has part: feature:1145010-1145098:-1:exon
so has part: feature:1144279-1144463:-1:exon
so has part: feature:1142234-1142398:-1:exon
so has part: feature:1140389-1140450:-1:exon
so has part: feature:1140153-1140233:-1:exon
so has part: feature:1138770-1138838:-1:exon
so has part: feature:1138309-1138429:-1:exon
so has part: feature:1137424-1137580:-1:exon
so has part: feature:1137100-1137241:-1:exon
so has part: feature:1136286-1136456:-1:exon
so has part: feature:1135810-1135989:-1:exon
so has part: feature:1134870-1135035:-1:exon
so has part: feature:1134201-1134292:-1:exon

XP_017897098.1
type: Protein
SIO_000068: ncbiprotein

position:1134201:-1
position: 1134201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148514:-1
position: 1148514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1148476-1148514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145010-1145098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1144279-1144463:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1142234-1142398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140389-1140450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1140153-1140233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1138770-1138838:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1138309-1138429:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137424-1137580:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1137100-1137241:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1136286-1136456:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1135810-1135989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1134870-1135035:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1134201-1134292:-1:exon

JAKMIP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: JAKMIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1166898..1223544)
location: region:1166898-1223544:-1
so has part: feature:1166898-1223544:-1:exon
subclass of: SO_0000010

102178326
type: Gene
SIO_000068: ncbigene

position:1166898:-1
position: 1166898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223544:-1
position: 1223544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1166898-1223544:-1:exon

JAKMIP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: JAKMIP3
product: Janus kinase and microtubule interacting protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041637.1
SIO_010081: JAKMIP3
subclass of: SO_0000673
so part of: JAKMIP3
location: complement(join(1166898..1168010,1168607..1168648,1170428..1170493,1171836..1172039,1176144..1176221,1176303..1176371,1177299..1177364,1180612..1180671,1180925..1181023,1181701..1181799,1182058..1182120,1183083..1183166,1184182..1184310,1184653..1184781,1185562..1185621,1187245..1187280,1188379..1188510,1188742..1188888,1189419..1189538,1190866..1191081,1205896..1206393,1206848..1207059,1223487..1223544))
location: region:1166898-1223544:-1
so has part: feature:1223487-1223544:-1:exon
so has part: feature:1206848-1207059:-1:exon
so has part: feature:1205896-1206393:-1:exon
so has part: feature:1190866-1191081:-1:exon
so has part: feature:1189419-1189538:-1:exon
so has part: feature:1188742-1188888:-1:exon
so has part: feature:1188379-1188510:-1:exon
so has part: feature:1187245-1187280:-1:exon
so has part: feature:1185562-1185621:-1:exon
so has part: feature:1184653-1184781:-1:exon
so has part: feature:1184182-1184310:-1:exon
so has part: feature:1183083-1183166:-1:exon
so has part: feature:1182058-1182120:-1:exon
so has part: feature:1181701-1181799:-1:exon
so has part: feature:1180925-1181023:-1:exon
so has part: feature:1180612-1180671:-1:exon
so has part: feature:1177299-1177364:-1:exon
so has part: feature:1176303-1176371:-1:exon
so has part: feature:1176144-1176221:-1:exon
so has part: feature:1171836-1172039:-1:exon
so has part: feature:1170428-1170493:-1:exon
so has part: feature:1168607-1168648:-1:exon
so has part: feature:1166898-1168010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1223487-1223544:-1:exon

position:1223487:-1
position: 1223487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1206848-1207059:-1:exon

position:1206848:-1
position: 1206848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207059:-1
position: 1207059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1205896-1206393:-1:exon

position:1205896:-1
position: 1205896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206393:-1
position: 1206393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1190866-1191081:-1:exon

position:1190866:-1
position: 1190866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191081:-1
position: 1191081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1189419-1189538:-1:exon

position:1189419:-1
position: 1189419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189538:-1
position: 1189538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1188742-1188888:-1:exon

position:1188742:-1
position: 1188742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188888:-1
position: 1188888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1188379-1188510:-1:exon

position:1188379:-1
position: 1188379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188510:-1
position: 1188510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1187245-1187280:-1:exon

position:1187245:-1
position: 1187245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187280:-1
position: 1187280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1185562-1185621:-1:exon

position:1185562:-1
position: 1185562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185621:-1
position: 1185621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1184653-1184781:-1:exon

position:1184653:-1
position: 1184653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184781:-1
position: 1184781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1184182-1184310:-1:exon

position:1184182:-1
position: 1184182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184310:-1
position: 1184310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1183083-1183166:-1:exon

position:1183083:-1
position: 1183083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183166:-1
position: 1183166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1182058-1182120:-1:exon

position:1182058:-1
position: 1182058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182120:-1
position: 1182120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1181701-1181799:-1:exon

position:1181701:-1
position: 1181701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181799:-1
position: 1181799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1180925-1181023:-1:exon

position:1180925:-1
position: 1180925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181023:-1
position: 1181023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1180612-1180671:-1:exon

position:1180612:-1
position: 1180612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180671:-1
position: 1180671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1177299-1177364:-1:exon

position:1177299:-1
position: 1177299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177364:-1
position: 1177364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1176303-1176371:-1:exon

position:1176303:-1
position: 1176303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176371:-1
position: 1176371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1176144-1176221:-1:exon

position:1176144:-1
position: 1176144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176221:-1
position: 1176221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1171836-1172039:-1:exon

position:1171836:-1
position: 1171836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172039:-1
position: 1172039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1170428-1170493:-1:exon

position:1170428:-1
position: 1170428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170493:-1
position: 1170493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1168607-1168648:-1:exon

position:1168607:-1
position: 1168607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168648:-1
position: 1168648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1166898-1168010:-1:exon

position:1168010:-1
position: 1168010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

JAKMIP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: JAKMIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 3 isoform X3
translation: MSKKGAGGRSKGDKAEVLAALQAANEDLRAKLTETQIELQQEKSKVGRVEREKNQELRQVREHEQHRSAVLLTELRTKLHEEKMKELQALREALLRQHEAELLRVIRTKDSENQRLQALLHAVRDGGPDRARTVLLSEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLVIRADKIKAAEIRSVYHLHQEEISRIKKECEREIRRLMEEIKFKDRAVFVLERELGVQAGHAQRLQLQKEALDEQLSQVKETDRHPGSPRRELPHASGAGDASDHSGSPEQQLDEKDARRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLTRKNEDLSHSLRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQHLIDELSKTLETAGYVKSVLERDKLLRYRKQRKKMAKLPKPVVVETFFGYDEEASLESDGSSISHQTDRTDRTPCSPDDDLEEGMAKEETELRFRQLTMEYQALQRAYALLQEQVGGTLDAEREVKTREQLQVDVQRAQARIEDLQKALAEQGQDMKWIEEKQALFRRNQELVEKIKQMETEEARLKHDVQDAKDQNELLEFRILELEERERKSPAITFHHTPFVDGKSPLQAYCEAEGVTDILVSELMKKLDLLGDNAVSNLTNEEQVVVIQARTVLTLAEKWLQQIEETESALQRKMVDLESEKELFSKQKGYLDEELDYRKQCLDQAHKRILELEAMLYDALQQEAGAKVAELLSEEEREKLGVAVEQWKRQVMSELRERDAQILRERMELLQLAQQRIKELEERIEAQKRQIKELEEKLSFCGHSSPGHSGVPPFPPALPESGGRPSLKTRGEPASADALPSRRRERGGL
SIO_010081: JAKMIP3
subclass of: SO_0000673
so part of: JAKMIP3
location: complement(join(1167894..1168010,1168607..1168648,1170428..1170493,1171836..1172039,1176144..1176221,1176303..1176371,1177299..1177364,1180612..1180671,1180925..1181023,1181701..1181799,1182058..1182120,1183083..1183166,1184182..1184310,1184653..1184781,1185562..1185621,1187245..1187280,1188379..1188510,1188742..1188888,1189419..1189538,1190866..1191081,1205896..1206393,1206848..1206982))
location: region:1167894-1206982:-1
so has part: feature:1206848-1206982:-1:exon
so has part: feature:1205896-1206393:-1:exon
so has part: feature:1190866-1191081:-1:exon
so has part: feature:1189419-1189538:-1:exon
so has part: feature:1188742-1188888:-1:exon
so has part: feature:1188379-1188510:-1:exon
so has part: feature:1187245-1187280:-1:exon
so has part: feature:1185562-1185621:-1:exon
so has part: feature:1184653-1184781:-1:exon
so has part: feature:1184182-1184310:-1:exon
so has part: feature:1183083-1183166:-1:exon
so has part: feature:1182058-1182120:-1:exon
so has part: feature:1181701-1181799:-1:exon
so has part: feature:1180925-1181023:-1:exon
so has part: feature:1180612-1180671:-1:exon
so has part: feature:1177299-1177364:-1:exon
so has part: feature:1176303-1176371:-1:exon
so has part: feature:1176144-1176221:-1:exon
so has part: feature:1171836-1172039:-1:exon
so has part: feature:1170428-1170493:-1:exon
so has part: feature:1168607-1168648:-1:exon
so has part: feature:1167894-1168010:-1:exon

XP_017897126.1
type: Protein
SIO_000068: ncbiprotein

position:1167894:-1
position: 1167894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206982:-1
position: 1206982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206848-1206982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205896-1206393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1190866-1191081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189419-1189538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188742-1188888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1188379-1188510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187245-1187280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1185562-1185621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1184653-1184781:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184182-1184310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1183083-1183166:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1182058-1182120:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1181701-1181799:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1180925-1181023:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1180612-1180671:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1177299-1177364:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1176303-1176371:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1176144-1176221:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1171836-1172039:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1170428-1170493:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1168607-1168648:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1167894-1168010:-1:exon

JAKMIP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: JAKMIP3
product: Janus kinase and microtubule interacting protein 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041639.1
SIO_010081: JAKMIP3
subclass of: SO_0000673
so part of: JAKMIP3
location: complement(join(1167932..1168010,1168607..1168679,1170428..1170493,1171836..1172039,1176144..1176221,1176303..1176371,1177299..1177364,1180618..1180671,1180925..1181023,1181701..1181799,1182058..1182120,1183083..1183166,1184182..1184310,1184653..1184781,1185562..1185621,1187245..1187280,1188379..1188510,1188742..1188888,1189419..1189538,1190866..1191081,1205896..1206393,1206848..1207059,1223487..1223544))
location: region:1167932-1223544:-1
so has part: feature:1223487-1223544:-1:exon
so has part: feature:1206848-1207059:-1:exon
so has part: feature:1205896-1206393:-1:exon
so has part: feature:1190866-1191081:-1:exon
so has part: feature:1189419-1189538:-1:exon
so has part: feature:1188742-1188888:-1:exon
so has part: feature:1188379-1188510:-1:exon
so has part: feature:1187245-1187280:-1:exon
so has part: feature:1185562-1185621:-1:exon
so has part: feature:1184653-1184781:-1:exon
so has part: feature:1184182-1184310:-1:exon
so has part: feature:1183083-1183166:-1:exon
so has part: feature:1182058-1182120:-1:exon
so has part: feature:1181701-1181799:-1:exon
so has part: feature:1180925-1181023:-1:exon
so has part: feature:1180618-1180671:-1:exon
so has part: feature:1177299-1177364:-1:exon
so has part: feature:1176303-1176371:-1:exon
so has part: feature:1176144-1176221:-1:exon
so has part: feature:1171836-1172039:-1:exon
so has part: feature:1170428-1170493:-1:exon
so has part: feature:1168607-1168679:-1:exon
so has part: feature:1167932-1168010:-1:exon

position:1167932:-1
position: 1167932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1223487-1223544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206848-1207059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205896-1206393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1190866-1191081:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1189419-1189538:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1188742-1188888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1188379-1188510:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187245-1187280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1185562-1185621:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184653-1184781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1184182-1184310:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1183083-1183166:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1182058-1182120:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1181701-1181799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1180925-1181023:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1180618-1180671:-1:exon

position:1180618:-1
position: 1180618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1177299-1177364:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1176303-1176371:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1176144-1176221:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1171836-1172039:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1170428-1170493:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1168607-1168679:-1:exon

position:1168679:-1
position: 1168679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1167932-1168010:-1:exon

JAKMIP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: JAKMIP3
product: Janus kinase and microtubule interacting protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041638.1
SIO_010081: JAKMIP3
subclass of: SO_0000673
so part of: JAKMIP3
location: complement(join(1167932..1168010,1168607..1168679,1170428..1170493,1171836..1172039,1176144..1176221,1176303..1176371,1177299..1177364,1180612..1180671,1180925..1181023,1181701..1181799,1182058..1182120,1183083..1183166,1184182..1184310,1184653..1184781,1185562..1185621,1187245..1187280,1188379..1188510,1188742..1188888,1189419..1189538,1190866..1191081,1205896..1206393,1206848..1207059,1223487..1223544))
location: region:1167932-1223544:-1
so has part: feature:1223487-1223544:-1:exon
so has part: feature:1206848-1207059:-1:exon
so has part: feature:1205896-1206393:-1:exon
so has part: feature:1190866-1191081:-1:exon
so has part: feature:1189419-1189538:-1:exon
so has part: feature:1188742-1188888:-1:exon
so has part: feature:1188379-1188510:-1:exon
so has part: feature:1187245-1187280:-1:exon
so has part: feature:1185562-1185621:-1:exon
so has part: feature:1184653-1184781:-1:exon
so has part: feature:1184182-1184310:-1:exon
so has part: feature:1183083-1183166:-1:exon
so has part: feature:1182058-1182120:-1:exon
so has part: feature:1181701-1181799:-1:exon
so has part: feature:1180925-1181023:-1:exon
so has part: feature:1180612-1180671:-1:exon
so has part: feature:1177299-1177364:-1:exon
so has part: feature:1176303-1176371:-1:exon
so has part: feature:1176144-1176221:-1:exon
so has part: feature:1171836-1172039:-1:exon
so has part: feature:1170428-1170493:-1:exon
so has part: feature:1168607-1168679:-1:exon
so has part: feature:1167932-1168010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1223487-1223544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206848-1207059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205896-1206393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1190866-1191081:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1189419-1189538:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1188742-1188888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1188379-1188510:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187245-1187280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1185562-1185621:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184653-1184781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1184182-1184310:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1183083-1183166:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1182058-1182120:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1181701-1181799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1180925-1181023:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1180612-1180671:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1177299-1177364:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1176303-1176371:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1176144-1176221:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1171836-1172039:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1170428-1170493:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1168607-1168679:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1167932-1168010:-1:exon

JAKMIP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: JAKMIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 3 isoform X5
translation: MSKKGAGGRSKGDKAEVLAALQAANEDLRAKLTETQIELQQEKSKVGRVEREKNQELRQVREHEQHRSAVLLTELRTKLHEEKMKELQALREALLRQHEAELLRVIRTKDSENQRLQALLHAVRDGGPDRARTVLLSEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLVIRADKIKAAEIRSVYHLHQEEISRIKKECEREIRRLMEEIKFKDRAVFVLERELGVQAGHAQRLQLQKEALDEQLSQVKETDRHPGSPRRELPHASGAGDASDHSGSPEQQLDEKDARRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLTRKNEDLSHSLRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQHLIDELSKTLETAGYVKSVLERDKLLRYRKQRKKMAKLPKPVVVETFFGYDEEASLESDGSSISHQTDRTDRTPCSPDDDLEEGMAKEETELRFRQLTMEYQALQRAYALLQEQVGGTLDAEREVKTREQLQVDVQRAQARIEDLQKALAEQGQDMKWIEEKQALFRRNQELVEKIKQMETEEARLKHDVQDAKDQNELLEFRILELEERERKSPAITFHHTPFVDGKSPLQAYCEAEGVTDILVSELMKKLDLLGDNANLTNEEQVVVIQARTVLTLAEKWLQQIEETESALQRKMVDLESEKELFSKQKGYLDEELDYRKQCLDQAHKRILELEAMLYDALQQEAGAKVAELLSEEEREKLGVAVEQWKRQVMSELRERDAQILRERMELLQLAQQRIKELEERIEAQKRQIKELEEKFLFLFLFFSLAFILWS
SIO_010081: JAKMIP3
subclass of: SO_0000673
so part of: JAKMIP3
location: complement(join(1168629..1168679,1170428..1170493,1171836..1172039,1176144..1176221,1176303..1176371,1177299..1177364,1180618..1180671,1180925..1181023,1181701..1181799,1182058..1182120,1183083..1183166,1184182..1184310,1184653..1184781,1185562..1185621,1187245..1187280,1188379..1188510,1188742..1188888,1189419..1189538,1190866..1191081,1205896..1206393,1206848..1206982))
location: region:1168629-1206982:-1
so has part: feature:1206848-1206982:-1:exon
so has part: feature:1205896-1206393:-1:exon
so has part: feature:1190866-1191081:-1:exon
so has part: feature:1189419-1189538:-1:exon
so has part: feature:1188742-1188888:-1:exon
so has part: feature:1188379-1188510:-1:exon
so has part: feature:1187245-1187280:-1:exon
so has part: feature:1185562-1185621:-1:exon
so has part: feature:1184653-1184781:-1:exon
so has part: feature:1184182-1184310:-1:exon
so has part: feature:1183083-1183166:-1:exon
so has part: feature:1182058-1182120:-1:exon
so has part: feature:1181701-1181799:-1:exon
so has part: feature:1180925-1181023:-1:exon
so has part: feature:1180618-1180671:-1:exon
so has part: feature:1177299-1177364:-1:exon
so has part: feature:1176303-1176371:-1:exon
so has part: feature:1176144-1176221:-1:exon
so has part: feature:1171836-1172039:-1:exon
so has part: feature:1170428-1170493:-1:exon
so has part: feature:1168629-1168679:-1:exon

XP_017897128.1
type: Protein
SIO_000068: ncbiprotein

position:1168629:-1
position: 1168629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206848-1206982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205896-1206393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1190866-1191081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189419-1189538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188742-1188888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1188379-1188510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187245-1187280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1185562-1185621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1184653-1184781:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184182-1184310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1183083-1183166:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1182058-1182120:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1181701-1181799:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1180925-1181023:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1180618-1180671:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1177299-1177364:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1176303-1176371:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1176144-1176221:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1171836-1172039:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1170428-1170493:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1168629-1168679:-1:exon

JAKMIP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: JAKMIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 3 isoform X4
translation: MSKKGAGGRSKGDKAEVLAALQAANEDLRAKLTETQIELQQEKSKVGRVEREKNQELRQVREHEQHRSAVLLTELRTKLHEEKMKELQALREALLRQHEAELLRVIRTKDSENQRLQALLHAVRDGGPDRARTVLLSEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLVIRADKIKAAEIRSVYHLHQEEISRIKKECEREIRRLMEEIKFKDRAVFVLERELGVQAGHAQRLQLQKEALDEQLSQVKETDRHPGSPRRELPHASGAGDASDHSGSPEQQLDEKDARRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLTRKNEDLSHSLRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQHLIDELSKTLETAGYVKSVLERDKLLRYRKQRKKMAKLPKPVVVETFFGYDEEASLESDGSSISHQTDRTDRTPCSPDDDLEEGMAKEETELRFRQLTMEYQALQRAYALLQEQVGGTLDAEREVKTREQLQVDVQRAQARIEDLQKALAEQGQDMKWIEEKQALFRRNQELVEKIKQMETEEARLKHDVQDAKDQNELLEFRILELEERERKSPAITFHHTPFVDGKSPLQAYCEAEGVTDILVSELMKKLDLLGDNAVSNLTNEEQVVVIQARTVLTLAEKWLQQIEETESALQRKMVDLESEKELFSKQKGYLDEELDYRKQCLDQAHKRILELEAMLYDALQQEAGAKVAELLSEEEREKLGVAVEQWKRQVMSELRERDAQILRERMELLQLAQQRIKELEERIEAQKRQIKELEEKFLFLFLFFSLAFILWS
SIO_010081: JAKMIP3
subclass of: SO_0000673
so part of: JAKMIP3
location: complement(join(1168629..1168679,1170428..1170493,1171836..1172039,1176144..1176221,1176303..1176371,1177299..1177364,1180612..1180671,1180925..1181023,1181701..1181799,1182058..1182120,1183083..1183166,1184182..1184310,1184653..1184781,1185562..1185621,1187245..1187280,1188379..1188510,1188742..1188888,1189419..1189538,1190866..1191081,1205896..1206393,1206848..1206982))
location: region:1168629-1206982:-1
so has part: feature:1206848-1206982:-1:exon
so has part: feature:1205896-1206393:-1:exon
so has part: feature:1190866-1191081:-1:exon
so has part: feature:1189419-1189538:-1:exon
so has part: feature:1188742-1188888:-1:exon
so has part: feature:1188379-1188510:-1:exon
so has part: feature:1187245-1187280:-1:exon
so has part: feature:1185562-1185621:-1:exon
so has part: feature:1184653-1184781:-1:exon
so has part: feature:1184182-1184310:-1:exon
so has part: feature:1183083-1183166:-1:exon
so has part: feature:1182058-1182120:-1:exon
so has part: feature:1181701-1181799:-1:exon
so has part: feature:1180925-1181023:-1:exon
so has part: feature:1180612-1180671:-1:exon
so has part: feature:1177299-1177364:-1:exon
so has part: feature:1176303-1176371:-1:exon
so has part: feature:1176144-1176221:-1:exon
so has part: feature:1171836-1172039:-1:exon
so has part: feature:1170428-1170493:-1:exon
so has part: feature:1168629-1168679:-1:exon

XP_017897127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1206848-1206982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205896-1206393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1190866-1191081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189419-1189538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188742-1188888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1188379-1188510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187245-1187280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1185562-1185621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1184653-1184781:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184182-1184310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1183083-1183166:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1182058-1182120:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1181701-1181799:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1180925-1181023:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1180612-1180671:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1177299-1177364:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1176303-1176371:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1176144-1176221:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1171836-1172039:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1170428-1170493:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1168629-1168679:-1:exon

JAKMIP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: JAKMIP3
product: Janus kinase and microtubule interacting protein 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018041640.1
SIO_010081: JAKMIP3
subclass of: SO_0000673
so part of: JAKMIP3
location: complement(join(1169917..1170493,1171836..1172039,1176144..1176221,1176303..1176371,1177299..1177364,1180612..1180671,1180925..1181023,1181701..1181799,1182058..1182120,1183083..1183166,1184182..1184310,1184653..1184781,1185562..1185621,1187245..1187280,1188379..1188510,1188742..1188888,1189419..1189532,1205896..1206393,1206848..1207059,1223487..1223544))
location: region:1169917-1223544:-1
so has part: feature:1223487-1223544:-1:exon
so has part: feature:1206848-1207059:-1:exon
so has part: feature:1205896-1206393:-1:exon
so has part: feature:1189419-1189532:-1:exon
so has part: feature:1188742-1188888:-1:exon
so has part: feature:1188379-1188510:-1:exon
so has part: feature:1187245-1187280:-1:exon
so has part: feature:1185562-1185621:-1:exon
so has part: feature:1184653-1184781:-1:exon
so has part: feature:1184182-1184310:-1:exon
so has part: feature:1183083-1183166:-1:exon
so has part: feature:1182058-1182120:-1:exon
so has part: feature:1181701-1181799:-1:exon
so has part: feature:1180925-1181023:-1:exon
so has part: feature:1180612-1180671:-1:exon
so has part: feature:1177299-1177364:-1:exon
so has part: feature:1176303-1176371:-1:exon
so has part: feature:1176144-1176221:-1:exon
so has part: feature:1171836-1172039:-1:exon
so has part: feature:1169917-1170493:-1:exon

position:1169917:-1
position: 1169917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1223487-1223544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206848-1207059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205896-1206393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189419-1189532:-1:exon

position:1189532:-1
position: 1189532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1188742-1188888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1188379-1188510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187245-1187280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1185562-1185621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1184653-1184781:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184182-1184310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1183083-1183166:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1182058-1182120:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1181701-1181799:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1180925-1181023:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1180612-1180671:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1177299-1177364:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1176303-1176371:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1176144-1176221:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1171836-1172039:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1169917-1170493:-1:exon

JAKMIP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: JAKMIP3
product: Janus kinase and microtubule interacting protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041636.1
SIO_010081: JAKMIP3
subclass of: SO_0000673
so part of: JAKMIP3
location: complement(join(1169917..1170493,1171836..1172039,1176144..1176221,1176303..1176371,1177299..1177364,1180618..1180671,1180925..1181023,1181701..1181799,1182058..1182120,1183083..1183166,1184182..1184310,1184653..1184781,1185562..1185621,1187245..1187280,1188379..1188510,1188742..1188888,1189419..1189538,1190866..1191081,1205896..1206393,1206848..1207059,1223487..1223544))
location: region:1169917-1223544:-1
so has part: feature:1223487-1223544:-1:exon
so has part: feature:1206848-1207059:-1:exon
so has part: feature:1205896-1206393:-1:exon
so has part: feature:1190866-1191081:-1:exon
so has part: feature:1189419-1189538:-1:exon
so has part: feature:1188742-1188888:-1:exon
so has part: feature:1188379-1188510:-1:exon
so has part: feature:1187245-1187280:-1:exon
so has part: feature:1185562-1185621:-1:exon
so has part: feature:1184653-1184781:-1:exon
so has part: feature:1184182-1184310:-1:exon
so has part: feature:1183083-1183166:-1:exon
so has part: feature:1182058-1182120:-1:exon
so has part: feature:1181701-1181799:-1:exon
so has part: feature:1180925-1181023:-1:exon
so has part: feature:1180618-1180671:-1:exon
so has part: feature:1177299-1177364:-1:exon
so has part: feature:1176303-1176371:-1:exon
so has part: feature:1176144-1176221:-1:exon
so has part: feature:1171836-1172039:-1:exon
so has part: feature:1169917-1170493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1223487-1223544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206848-1207059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205896-1206393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1190866-1191081:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1189419-1189538:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1188742-1188888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1188379-1188510:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187245-1187280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1185562-1185621:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184653-1184781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1184182-1184310:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1183083-1183166:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1182058-1182120:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1181701-1181799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1180925-1181023:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1180618-1180671:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1177299-1177364:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1176303-1176371:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1176144-1176221:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1171836-1172039:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1169917-1170493:-1:exon

JAKMIP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: JAKMIP3
product: Janus kinase and microtubule interacting protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041635.1
SIO_010081: JAKMIP3
subclass of: SO_0000673
so part of: JAKMIP3
location: complement(join(1169917..1170493,1171836..1172039,1176144..1176221,1176303..1176371,1177299..1177364,1180612..1180671,1180925..1181023,1181701..1181799,1182058..1182120,1183083..1183166,1184182..1184310,1184653..1184781,1185562..1185621,1187245..1187280,1188379..1188510,1188742..1188888,1189419..1189538,1190866..1191081,1205896..1206393,1206848..1207059,1223487..1223544))
location: region:1169917-1223544:-1
so has part: feature:1223487-1223544:-1:exon
so has part: feature:1206848-1207059:-1:exon
so has part: feature:1205896-1206393:-1:exon
so has part: feature:1190866-1191081:-1:exon
so has part: feature:1189419-1189538:-1:exon
so has part: feature:1188742-1188888:-1:exon
so has part: feature:1188379-1188510:-1:exon
so has part: feature:1187245-1187280:-1:exon
so has part: feature:1185562-1185621:-1:exon
so has part: feature:1184653-1184781:-1:exon
so has part: feature:1184182-1184310:-1:exon
so has part: feature:1183083-1183166:-1:exon
so has part: feature:1182058-1182120:-1:exon
so has part: feature:1181701-1181799:-1:exon
so has part: feature:1180925-1181023:-1:exon
so has part: feature:1180612-1180671:-1:exon
so has part: feature:1177299-1177364:-1:exon
so has part: feature:1176303-1176371:-1:exon
so has part: feature:1176144-1176221:-1:exon
so has part: feature:1171836-1172039:-1:exon
so has part: feature:1169917-1170493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1223487-1223544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206848-1207059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205896-1206393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1190866-1191081:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1189419-1189538:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1188742-1188888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1188379-1188510:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187245-1187280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1185562-1185621:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184653-1184781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1184182-1184310:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1183083-1183166:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1182058-1182120:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1181701-1181799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1180925-1181023:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1180612-1180671:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1177299-1177364:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1176303-1176371:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1176144-1176221:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1171836-1172039:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1169917-1170493:-1:exon

JAKMIP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: JAKMIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 3 isoform X6
translation: MSKKGAGGRSKGDKAEVLAALQAANEDLRAKLTETQIELQQEKSKVGRVEREKNQELRQVREHEQHRSAVLLTELRTKLHEEKMKELQALREALLRQHEAELLRVIRTKDSENQRLQALLHAVRDGGPDRARTVLLSEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLVIRADKIKAAEIRSVYHLHQEEISRIKKECEREIRRLQLDEKDARRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLTRKNEDLSHSLRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQHLIDELSKTLETAGYVKSVLERDKLLRYRKQRKKMAKLPKPVVVETFFGYDEEASLESDGSSISHQTDRTDRTPCSPDDDLEEGMAKEETELRFRQLTMEYQALQRAYALLQEQVGGTLDAEREVKTREQLQVDVQRAQARIEDLQKALAEQGQDMKWIEEKQALFRRNQELVEKIKQMETEEARLKHDVQDAKDQNELLEFRILELEERERKSPAITFHHTPFVDGKSPLQAYCEAEGVTDILVSELMKKLDLLGDNAVSNLTNEEQVVVIQARTVLTLAEKWLQQIEETESALQRKMVDLESEKELFSKQKGYLDEELDYRKQCLDQAHKRILELEAMLYDALQQEAGAKVAELLSEEEREKLGVAVEQWKRQVMSELRERDAQILRERMELLQLAQQRIKELEERIEAQKRQIKELEEKVSKVSVNFGADSQRRAVTPGAPQHWSEAGVLLGRKRLRTRGWSAGSGNTLASMTQPCHFQDHASHGLSVPASGVPVDQ
SIO_010081: JAKMIP3
subclass of: SO_0000673
so part of: JAKMIP3
location: complement(join(1170191..1170493,1171836..1172039,1176144..1176221,1176303..1176371,1177299..1177364,1180612..1180671,1180925..1181023,1181701..1181799,1182058..1182120,1183083..1183166,1184182..1184310,1184653..1184781,1185562..1185621,1187245..1187280,1188379..1188510,1188742..1188888,1189419..1189532,1205896..1206393,1206848..1206982))
location: region:1170191-1206982:-1
so has part: feature:1206848-1206982:-1:exon
so has part: feature:1205896-1206393:-1:exon
so has part: feature:1189419-1189532:-1:exon
so has part: feature:1188742-1188888:-1:exon
so has part: feature:1188379-1188510:-1:exon
so has part: feature:1187245-1187280:-1:exon
so has part: feature:1185562-1185621:-1:exon
so has part: feature:1184653-1184781:-1:exon
so has part: feature:1184182-1184310:-1:exon
so has part: feature:1183083-1183166:-1:exon
so has part: feature:1182058-1182120:-1:exon
so has part: feature:1181701-1181799:-1:exon
so has part: feature:1180925-1181023:-1:exon
so has part: feature:1180612-1180671:-1:exon
so has part: feature:1177299-1177364:-1:exon
so has part: feature:1176303-1176371:-1:exon
so has part: feature:1176144-1176221:-1:exon
so has part: feature:1171836-1172039:-1:exon
so has part: feature:1170191-1170493:-1:exon

XP_017897129.1
type: Protein
SIO_000068: ncbiprotein

position:1170191:-1
position: 1170191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206848-1206982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205896-1206393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1189419-1189532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1188742-1188888:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188379-1188510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1187245-1187280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1185562-1185621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1184653-1184781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1184182-1184310:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1183083-1183166:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1182058-1182120:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1181701-1181799:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1180925-1181023:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1180612-1180671:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1177299-1177364:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1176303-1176371:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1176144-1176221:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1171836-1172039:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1170191-1170493:-1:exon

JAKMIP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: JAKMIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 3 isoform X2
translation: MSKKGAGGRSKGDKAEVLAALQAANEDLRAKLTETQIELQQEKSKVGRVEREKNQELRQVREHEQHRSAVLLTELRTKLHEEKMKELQALREALLRQHEAELLRVIRTKDSENQRLQALLHAVRDGGPDRARTVLLSEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLVIRADKIKAAEIRSVYHLHQEEISRIKKECEREIRRLMEEIKFKDRAVFVLERELGVQAGHAQRLQLQKEALDEQLSQVKETDRHPGSPRRELPHASGAGDASDHSGSPEQQLDEKDARRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLTRKNEDLSHSLRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQHLIDELSKTLETAGYVKSVLERDKLLRYRKQRKKMAKLPKPVVVETFFGYDEEASLESDGSSISHQTDRTDRTPCSPDDDLEEGMAKEETELRFRQLTMEYQALQRAYALLQEQVGGTLDAEREVKTREQLQVDVQRAQARIEDLQKALAEQGQDMKWIEEKQALFRRNQELVEKIKQMETEEARLKHDVQDAKDQNELLEFRILELEERERKSPAITFHHTPFVDGKSPLQAYCEAEGVTDILVSELMKKLDLLGDNANLTNEEQVVVIQARTVLTLAEKWLQQIEETESALQRKMVDLESEKELFSKQKGYLDEELDYRKQCLDQAHKRILELEAMLYDALQQEAGAKVAELLSEEEREKLGVAVEQWKRQVMSELRERDAQILRERMELLQLAQQRIKELEERIEAQKRQIKELEEKVSKVSVNFGADSQRRAVTPGAPQHWSEAGVLLGRKRLRTRGWSAGSGNTLASMTQPCHFQDHASHGLSVPASGVPVDQ
SIO_010081: JAKMIP3
subclass of: SO_0000673
so part of: JAKMIP3
location: complement(join(1170191..1170493,1171836..1172039,1176144..1176221,1176303..1176371,1177299..1177364,1180618..1180671,1180925..1181023,1181701..1181799,1182058..1182120,1183083..1183166,1184182..1184310,1184653..1184781,1185562..1185621,1187245..1187280,1188379..1188510,1188742..1188888,1189419..1189538,1190866..1191081,1205896..1206393,1206848..1206982))
location: region:1170191-1206982:-1
so has part: feature:1206848-1206982:-1:exon
so has part: feature:1205896-1206393:-1:exon
so has part: feature:1190866-1191081:-1:exon
so has part: feature:1189419-1189538:-1:exon
so has part: feature:1188742-1188888:-1:exon
so has part: feature:1188379-1188510:-1:exon
so has part: feature:1187245-1187280:-1:exon
so has part: feature:1185562-1185621:-1:exon
so has part: feature:1184653-1184781:-1:exon
so has part: feature:1184182-1184310:-1:exon
so has part: feature:1183083-1183166:-1:exon
so has part: feature:1182058-1182120:-1:exon
so has part: feature:1181701-1181799:-1:exon
so has part: feature:1180925-1181023:-1:exon
so has part: feature:1180618-1180671:-1:exon
so has part: feature:1177299-1177364:-1:exon
so has part: feature:1176303-1176371:-1:exon
so has part: feature:1176144-1176221:-1:exon
so has part: feature:1171836-1172039:-1:exon
so has part: feature:1170191-1170493:-1:exon

XP_017897125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1206848-1206982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205896-1206393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1190866-1191081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189419-1189538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188742-1188888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1188379-1188510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187245-1187280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1185562-1185621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1184653-1184781:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184182-1184310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1183083-1183166:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1182058-1182120:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1181701-1181799:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1180925-1181023:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1180618-1180671:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1177299-1177364:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1176303-1176371:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1176144-1176221:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1171836-1172039:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1170191-1170493:-1:exon

JAKMIP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: JAKMIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 3 isoform X1
translation: MSKKGAGGRSKGDKAEVLAALQAANEDLRAKLTETQIELQQEKSKVGRVEREKNQELRQVREHEQHRSAVLLTELRTKLHEEKMKELQALREALLRQHEAELLRVIRTKDSENQRLQALLHAVRDGGPDRARTVLLSEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLVIRADKIKAAEIRSVYHLHQEEISRIKKECEREIRRLMEEIKFKDRAVFVLERELGVQAGHAQRLQLQKEALDEQLSQVKETDRHPGSPRRELPHASGAGDASDHSGSPEQQLDEKDARRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLTRKNEDLSHSLRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQHLIDELSKTLETAGYVKSVLERDKLLRYRKQRKKMAKLPKPVVVETFFGYDEEASLESDGSSISHQTDRTDRTPCSPDDDLEEGMAKEETELRFRQLTMEYQALQRAYALLQEQVGGTLDAEREVKTREQLQVDVQRAQARIEDLQKALAEQGQDMKWIEEKQALFRRNQELVEKIKQMETEEARLKHDVQDAKDQNELLEFRILELEERERKSPAITFHHTPFVDGKSPLQAYCEAEGVTDILVSELMKKLDLLGDNAVSNLTNEEQVVVIQARTVLTLAEKWLQQIEETESALQRKMVDLESEKELFSKQKGYLDEELDYRKQCLDQAHKRILELEAMLYDALQQEAGAKVAELLSEEEREKLGVAVEQWKRQVMSELRERDAQILRERMELLQLAQQRIKELEERIEAQKRQIKELEEKVSKVSVNFGADSQRRAVTPGAPQHWSEAGVLLGRKRLRTRGWSAGSGNTLASMTQPCHFQDHASHGLSVPASGVPVDQ
SIO_010081: JAKMIP3
subclass of: SO_0000673
so part of: JAKMIP3
location: complement(join(1170191..1170493,1171836..1172039,1176144..1176221,1176303..1176371,1177299..1177364,1180612..1180671,1180925..1181023,1181701..1181799,1182058..1182120,1183083..1183166,1184182..1184310,1184653..1184781,1185562..1185621,1187245..1187280,1188379..1188510,1188742..1188888,1189419..1189538,1190866..1191081,1205896..1206393,1206848..1206982))
location: region:1170191-1206982:-1
so has part: feature:1206848-1206982:-1:exon
so has part: feature:1205896-1206393:-1:exon
so has part: feature:1190866-1191081:-1:exon
so has part: feature:1189419-1189538:-1:exon
so has part: feature:1188742-1188888:-1:exon
so has part: feature:1188379-1188510:-1:exon
so has part: feature:1187245-1187280:-1:exon
so has part: feature:1185562-1185621:-1:exon
so has part: feature:1184653-1184781:-1:exon
so has part: feature:1184182-1184310:-1:exon
so has part: feature:1183083-1183166:-1:exon
so has part: feature:1182058-1182120:-1:exon
so has part: feature:1181701-1181799:-1:exon
so has part: feature:1180925-1181023:-1:exon
so has part: feature:1180612-1180671:-1:exon
so has part: feature:1177299-1177364:-1:exon
so has part: feature:1176303-1176371:-1:exon
so has part: feature:1176144-1176221:-1:exon
so has part: feature:1171836-1172039:-1:exon
so has part: feature:1170191-1170493:-1:exon

XP_017897124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1206848-1206982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205896-1206393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1190866-1191081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189419-1189538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188742-1188888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1188379-1188510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187245-1187280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1185562-1185621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1184653-1184781:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184182-1184310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1183083-1183166:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1182058-1182120:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1181701-1181799:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1180925-1181023:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1180612-1180671:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1177299-1177364:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1176303-1176371:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1176144-1176221:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1171836-1172039:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1170191-1170493:-1:exon

BNIP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: BNIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1265126..1275972
location: region:1265126-1275972:1
so has part: feature:1265126-1275972:1:exon
subclass of: SO_0000010

102178036
type: Gene
SIO_000068: ncbigene

position:1265126:1
position: 1265126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275972:1
position: 1275972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265126-1275972:1:exon

BNIP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: BNIP3
product: BCL2 interacting protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 103 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_018041549.1
SIO_010081: BNIP3
subclass of: SO_0000673
so part of: BNIP3
location: join(1265126..1265330,1271805..1271955,1272251..1272335,1273695..1273804,1273872..1274024,1274972..1275972)
location: region:1265126-1275972:1
so has part: feature:1265126-1265330:1:exon
so has part: feature:1271805-1271955:1:exon
so has part: feature:1272251-1272335:1:exon
so has part: feature:1273695-1273804:1:exon
so has part: feature:1273872-1274024:1:exon
so has part: feature:1274972-1275972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1265126-1265330:1:exon

position:1265330:1
position: 1265330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1271805-1271955:1:exon

position:1271805:1
position: 1271805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1271955:1
position: 1271955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1272251-1272335:1:exon

position:1272251:1
position: 1272251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272335:1
position: 1272335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1273695-1273804:1:exon

position:1273695:1
position: 1273695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273804:1
position: 1273804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1273872-1274024:1:exon

position:1273872:1
position: 1273872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274024:1
position: 1274024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1274972-1275972:1:exon

position:1274972:1
position: 1274972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BNIP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: BNIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 3
translation: MSQSESPGLQEESLHGSWVELHFGSNGSGGSVPDSASIYNGDMEKILLDAQHESGRSSSKSSHCDSPPRSQTPQDTNRASETDAHSLGEKNSSQSEEDYMERRKEVESILKKNSDWIWDWSSRPENIPPAKELLLLRHPKRAPTLSMRNTSVMKKGGIFSAEFLKVFLPSLLLSHLLAIGLGIYIGRRLTTSTSTF
SIO_010081: BNIP3
subclass of: SO_0000673
so part of: BNIP3
location: join(1265285..1265330,1271805..1271955,1272251..1272335,1273695..1273804,1273872..1274024,1274972..1275017)
location: region:1265285-1275017:1
so has part: feature:1265285-1265330:1:exon
so has part: feature:1271805-1271955:1:exon
so has part: feature:1272251-1272335:1:exon
so has part: feature:1273695-1273804:1:exon
so has part: feature:1273872-1274024:1:exon
so has part: feature:1274972-1275017:1:exon

XP_017897038.1
type: Protein
SIO_000068: ncbiprotein

position:1265285:1
position: 1265285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275017:1
position: 1275017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265285-1265330:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1271805-1271955:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1272251-1272335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1273695-1273804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1273872-1274024:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1274972-1275017:1:exon

LOC106503653
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503653
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1278823..1290349)
location: region:1278823-1290349:-1
so has part: feature:1278823-1290349:-1:exon
subclass of: SO_0000011

106503653
type: Gene
SIO_000068: ncbigene

position:1278823:-1
position: 1278823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290349:-1
position: 1290349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278823-1290349:-1:exon

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001917331.1
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280720..1280817,1281123..1281180,1281555..1281677,1283583..1283902,1285226..1288524,1289564..1290349))
location: region:1278823-1290349:-1
so has part: feature:1289564-1290349:-1:exon
so has part: feature:1285226-1288524:-1:exon
so has part: feature:1283583-1283902:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1281123-1281180:-1:exon
so has part: feature:1280720-1280817:-1:exon
so has part: feature:1278823-1279741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1289564-1290349:-1:exon

position:1289564:-1
position: 1289564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1285226-1288524:-1:exon

position:1285226:-1
position: 1285226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288524:-1
position: 1288524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1283583-1283902:-1:exon

position:1283583:-1
position: 1283583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283902:-1
position: 1283902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1281555-1281677:-1:exon

position:1281555:-1
position: 1281555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1281677:-1
position: 1281677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1281123-1281180:-1:exon

position:1281123:-1
position: 1281123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1281180:-1
position: 1281180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1280720-1280817:-1:exon

position:1280720:-1
position: 1280720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280817:-1
position: 1280817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1278823-1279741:-1:exon

position:1279741:-1
position: 1279741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001917329.1
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280720..1280817,1281123..1281180,1281555..1281677,1283583..1283902,1285226..1287069,1287365..1290349))
location: region:1278823-1290349:-1
so has part: feature:1287365-1290349:-1:exon
so has part: feature:1285226-1287069:-1:exon
so has part: feature:1283583-1283902:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1281123-1281180:-1:exon
so has part: feature:1280720-1280817:-1:exon
so has part: feature:1278823-1279741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1287365-1290349:-1:exon

position:1287365:-1
position: 1287365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1285226-1287069:-1:exon

position:1287069:-1
position: 1287069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1283583-1283902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1281555-1281677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1281123-1281180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1280720-1280817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1278823-1279741:-1:exon

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001917332.1
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280720..1280817,1281123..1281180,1281555..1281677,1283583..1283902,1285226..1287069,1287354..1290349))
location: region:1278823-1290349:-1
so has part: feature:1287354-1290349:-1:exon
so has part: feature:1285226-1287069:-1:exon
so has part: feature:1283583-1283902:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1281123-1281180:-1:exon
so has part: feature:1280720-1280817:-1:exon
so has part: feature:1278823-1279741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1287354-1290349:-1:exon

position:1287354:-1
position: 1287354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1285226-1287069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1283583-1283902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1281555-1281677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1281123-1281180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1280720-1280817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1278823-1279741:-1:exon

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_001917330.1
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280720..1280817,1281123..1281180,1281555..1281677,1283583..1283902,1285226..1285924,1286927..1290349))
location: region:1278823-1290349:-1
so has part: feature:1286927-1290349:-1:exon
so has part: feature:1285226-1285924:-1:exon
so has part: feature:1283583-1283902:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1281123-1281180:-1:exon
so has part: feature:1280720-1280817:-1:exon
so has part: feature:1278823-1279741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1286927-1290349:-1:exon

position:1286927:-1
position: 1286927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1285226-1285924:-1:exon

position:1285924:-1
position: 1285924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1283583-1283902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1281555-1281677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1281123-1281180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1280720-1280817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1278823-1279741:-1:exon

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001917328.1
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280720..1280817,1281123..1281180,1281555..1281677,1283583..1283902,1285226..1285927,1286927..1290349))
location: region:1278823-1290349:-1
so has part: feature:1286927-1290349:-1:exon
so has part: feature:1285226-1285927:-1:exon
so has part: feature:1283583-1283902:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1281123-1281180:-1:exon
so has part: feature:1280720-1280817:-1:exon
so has part: feature:1278823-1279741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1286927-1290349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285226-1285927:-1:exon

position:1285927:-1
position: 1285927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1283583-1283902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1281555-1281677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1281123-1281180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1280720-1280817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1278823-1279741:-1:exon

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_001297346.2
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280720..1280817,1281123..1281180,1281555..1281677,1283583..1283672,1285226..1290349))
location: region:1278823-1290349:-1
so has part: feature:1285226-1290349:-1:exon
so has part: feature:1283583-1283672:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1281123-1281180:-1:exon
so has part: feature:1280720-1280817:-1:exon
so has part: feature:1278823-1279741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285226-1290349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283583-1283672:-1:exon

position:1283672:-1
position: 1283672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1281555-1281677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1281123-1281180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1280720-1280817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1278823-1279741:-1:exon

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_001917333.1
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280720..1280817,1281123..1281180,1281555..1281677,1283583..1283869,1285226..1290349))
location: region:1278823-1290349:-1
so has part: feature:1285226-1290349:-1:exon
so has part: feature:1283583-1283869:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1281123-1281180:-1:exon
so has part: feature:1280720-1280817:-1:exon
so has part: feature:1278823-1279741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285226-1290349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283583-1283869:-1:exon

position:1283869:-1
position: 1283869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1281555-1281677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1281123-1281180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1280720-1280817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1278823-1279741:-1:exon

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001297344.2
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280720..1280817,1281123..1281180,1281555..1281677,1283583..1283672,1283804..1283902,1285226..1290349))
location: region:1278823-1290349:-1
so has part: feature:1285226-1290349:-1:exon
so has part: feature:1283804-1283902:-1:exon
so has part: feature:1283583-1283672:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1281123-1281180:-1:exon
so has part: feature:1280720-1280817:-1:exon
so has part: feature:1278823-1279741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285226-1290349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283804-1283902:-1:exon

position:1283804:-1
position: 1283804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1283583-1283672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1281555-1281677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1281123-1281180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1280720-1280817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1278823-1279741:-1:exon

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_001917338.1
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280720..1280742,1281555..1281677,1283583..1283902,1285226..1290349))
location: region:1278823-1290349:-1
so has part: feature:1285226-1290349:-1:exon
so has part: feature:1283583-1283902:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1280720-1280742:-1:exon
so has part: feature:1278823-1279741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285226-1290349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283583-1283902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1281555-1281677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1280720-1280742:-1:exon

position:1280742:-1
position: 1280742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1278823-1279741:-1:exon

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001917337.1
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280566..1280742,1281555..1281677,1283583..1283902,1285226..1290349))
location: region:1278823-1290349:-1
so has part: feature:1285226-1290349:-1:exon
so has part: feature:1283583-1283902:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1280566-1280742:-1:exon
so has part: feature:1278823-1279741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285226-1290349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283583-1283902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1281555-1281677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1280566-1280742:-1:exon

position:1280566:-1
position: 1280566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1278823-1279741:-1:exon

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001917336.1
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280720..1280742,1281123..1281180,1281555..1281677,1283583..1283902,1285226..1290349))
location: region:1278823-1290349:-1
so has part: feature:1285226-1290349:-1:exon
so has part: feature:1283583-1283902:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1281123-1281180:-1:exon
so has part: feature:1280720-1280742:-1:exon
so has part: feature:1278823-1279741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285226-1290349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283583-1283902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1281555-1281677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1281123-1281180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1280720-1280742:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1278823-1279741:-1:exon

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001917335.1
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280566..1280742,1281123..1281180,1281555..1281677,1283583..1283902,1285226..1290349))
location: region:1278823-1290349:-1
so has part: feature:1285226-1290349:-1:exon
so has part: feature:1283583-1283902:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1281123-1281180:-1:exon
so has part: feature:1280566-1280742:-1:exon
so has part: feature:1278823-1279741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285226-1290349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283583-1283902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1281555-1281677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1281123-1281180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1280566-1280742:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1278823-1279741:-1:exon

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001297343.2
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279361,1279469..1279741,1280720..1280817,1281123..1281180,1281555..1281677,1283583..1283902,1285226..1290349))
location: region:1278823-1290349:-1
so has part: feature:1285226-1290349:-1:exon
so has part: feature:1283583-1283902:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1281123-1281180:-1:exon
so has part: feature:1280720-1280817:-1:exon
so has part: feature:1279469-1279741:-1:exon
so has part: feature:1278823-1279361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285226-1290349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283583-1283902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1281555-1281677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1281123-1281180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1280720-1280817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1279469-1279741:-1:exon

position:1279469:-1
position: 1279469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1278823-1279361:-1:exon

position:1279361:-1
position: 1279361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001297342.2
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280720..1280817,1281123..1281180,1281555..1281677,1283583..1283902,1285226..1290349))
location: region:1278823-1290349:-1
so has part: feature:1285226-1290349:-1:exon
so has part: feature:1283583-1283902:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1281123-1281180:-1:exon
so has part: feature:1280720-1280817:-1:exon
so has part: feature:1278823-1279741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285226-1290349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283583-1283902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1281555-1281677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1281123-1281180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1280720-1280817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1278823-1279741:-1:exon

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001917334.1
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280566..1280817,1281123..1281180,1281555..1281677,1283583..1283902,1285226..1290349))
location: region:1278823-1290349:-1
so has part: feature:1285226-1290349:-1:exon
so has part: feature:1283583-1283902:-1:exon
so has part: feature:1281555-1281677:-1:exon
so has part: feature:1281123-1281180:-1:exon
so has part: feature:1280566-1280817:-1:exon
so has part: feature:1278823-1279741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285226-1290349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283583-1283902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1281555-1281677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1281123-1281180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1280566-1280817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1278823-1279741:-1:exon

LOC106503653
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503653
product: uncharacterized LOC106503653, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001917327.1
SIO_010081: LOC106503653
subclass of: SO_0000673
so part of: LOC106503653
location: complement(join(1278823..1279741,1280720..1280817,1281555..1282597,1283583..1285217))
location: region:1278823-1285217:-1
so has part: feature:1283583-1285217:-1:exon
so has part: feature:1281555-1282597:-1:exon
so has part: feature:1280720-1280817:-1:exon
so has part: feature:1278823-1279741:-1:exon

position:1285217:-1
position: 1285217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1283583-1285217:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281555-1282597:-1:exon

position:1282597:-1
position: 1282597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1280720-1280817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278823-1279741:-1:exon

LOC102175826
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102175826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1659815..1664667)
location: region:1659815-1664667:-1
so has part: feature:1659815-1664667:-1:exon

102175826
type: Gene
SIO_000068: ncbigene

position:1659815:-1
position: 1659815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664667:-1
position: 1664667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1659815-1664667:-1:exon

LOC102175826
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102175826
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102175826
subclass of: SO_0000673
so part of: LOC102175826
location: complement(1659815..1660475)
location: region:1659815-1660475:-1
so has part: feature:1659815-1660475:-1:exon

position:1660475:-1
position: 1660475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1659815-1660475:-1:exon

LOC102175826
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102175826
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102175826
subclass of: SO_0000673
so part of: LOC102175826
location: complement(1664662..1664667)
location: region:1664662-1664667:-1
so has part: feature:1664662-1664667:-1:exon

position:1664662:-1
position: 1664662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1664662-1664667:-1:exon

TCERG1L
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TCERG1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1746845..1946770
location: region:1746845-1946770:1
so has part: feature:1746845-1946770:1:exon
subclass of: SO_0000010

102175550
type: Gene
SIO_000068: ncbigene

position:1746845:1
position: 1746845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1946770:1
position: 1946770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1746845-1946770:1:exon

TCERG1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TCERG1L
product: transcription elongation regulator 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018041118.1
SIO_010081: TCERG1L
subclass of: SO_0000673
so part of: TCERG1L
location: join(1746845..1747189,1749231..1749377,1750079..1750259,1785606..1785791,1878861..1878952,1882818..1882906,1892438..1892592,1907627..1907696,1923721..1923856,1935872..1935961,1941004..1941122,1945879..1946770)
location: region:1746845-1946770:1
so has part: feature:1746845-1747189:1:exon
so has part: feature:1749231-1749377:1:exon
so has part: feature:1750079-1750259:1:exon
so has part: feature:1785606-1785791:1:exon
so has part: feature:1878861-1878952:1:exon
so has part: feature:1882818-1882906:1:exon
so has part: feature:1892438-1892592:1:exon
so has part: feature:1907627-1907696:1:exon
so has part: feature:1923721-1923856:1:exon
so has part: feature:1935872-1935961:1:exon
so has part: feature:1941004-1941122:1:exon
so has part: feature:1945879-1946770:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1746845-1747189:1:exon

position:1747189:1
position: 1747189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1749231-1749377:1:exon

position:1749231:1
position: 1749231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1749377:1
position: 1749377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1750079-1750259:1:exon

position:1750079:1
position: 1750079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1750259:1
position: 1750259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1785606-1785791:1:exon

position:1785606:1
position: 1785606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785791:1
position: 1785791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1878861-1878952:1:exon

position:1878861:1
position: 1878861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1878952:1
position: 1878952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1882818-1882906:1:exon

position:1882818:1
position: 1882818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1882906:1
position: 1882906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1892438-1892592:1:exon

position:1892438:1
position: 1892438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1892592:1
position: 1892592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1907627-1907696:1:exon

position:1907627:1
position: 1907627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1907696:1
position: 1907696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1923721-1923856:1:exon

position:1923721:1
position: 1923721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1923856:1
position: 1923856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1935872-1935961:1:exon

position:1935872:1
position: 1935872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1935961:1
position: 1935961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1941004-1941122:1:exon

position:1941004:1
position: 1941004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1941122:1
position: 1941122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1945879-1946770:1:exon

position:1945879:1
position: 1945879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TCERG1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TCERG1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1-like protein
translation: MLVDARLQRRRRRLQHQPRRRQPLLWQMNADPPPPPPPWVWMVPGSAGLLRLGTGVAPPPVLLASAQPPAGPLLPGLPAWQAPGEPLLPLLPLPSAPDHAAAAAAAHRYPVLNGQWLFGGHSPSIGLSPSSSVELVPIFPHVCTSALPLPVGKSWLDKRIPNCKIFLNNSFALDSTWIYPEESRLFHGPQKPQLLTNQVAMSLSRPAPASRPLPTVLIAPQPLPGGCHSSLKPMGSGPTVAIAAAATAVVSVDSAGLGGPSPSRVQPCRLLTLAPIRMPLRTAPFPDKSRERSRAPCPPALVLHAERKSPAGDGEDKEPPSILVTSEDSTPKGTRPVASAPVPGSPWCVVWTGDDRVFFFNPTMQLSVWEKPMDLRNRGDLNRIIEDPPHKRKLEATATEPSDGSSSEDGREDPDVKTKRNRTEGHVSPGPEEAERQDMGAKSPLPQILLPLEERAAHFRDMLLERGVSAFSTWEKELHKIVFDPRYLLLNSEERKQIFEQFVKTRIKEEYKEKKSKLLLAKEEFKKLLEESKLSPRTTFKEFAEKYGRDQRFRLVQKRKDQEHFFNQFILILKKRDKENRLRLRKMR
SIO_010081: TCERG1L
subclass of: SO_0000673
so part of: TCERG1L
location: join(1746845..1747189,1749231..1749377,1750079..1750259,1785606..1785791,1878861..1878952,1882818..1882906,1892438..1892592,1907627..1907696,1923721..1923856,1935872..1935961,1941004..1941122,1945879..1946035)
location: region:1746845-1946035:1
so has part: feature:1746845-1747189:1:exon
so has part: feature:1749231-1749377:1:exon
so has part: feature:1750079-1750259:1:exon
so has part: feature:1785606-1785791:1:exon
so has part: feature:1878861-1878952:1:exon
so has part: feature:1882818-1882906:1:exon
so has part: feature:1892438-1892592:1:exon
so has part: feature:1907627-1907696:1:exon
so has part: feature:1923721-1923856:1:exon
so has part: feature:1935872-1935961:1:exon
so has part: feature:1941004-1941122:1:exon
so has part: feature:1945879-1946035:1:exon

XP_017896607.1
type: Protein
SIO_000068: ncbiprotein

position:1946035:1
position: 1946035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1746845-1747189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1749231-1749377:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1750079-1750259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1785606-1785791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1878861-1878952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1882818-1882906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1892438-1892592:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1907627-1907696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1923721-1923856:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1935872-1935961:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1941004-1941122:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1945879-1946035:1:exon

TRNAC-ACA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAC-ACA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2122157..2122228
location: region:2122157-2122228:1
so has part: feature:2122157-2122228:1:exon
subclass of: SO_0000663

108634045
type: Gene
SIO_000068: ncbigene

position:2122157:1
position: 2122157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2122228:1
position: 2122228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2122157-2122228:1:exon

TRNAC-ACA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAC-ACA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon ACA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2122190..2122192,aa:Cys,seq:aca)
SIO_010081: TRNAC-ACA
subclass of: SO_0000673
so part of: TRNAC-ACA
location: 2122157..2122228
location: region:2122157-2122228:1
so has part: feature:2122157-2122228:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2122157-2122228:1:exon

LOC102184588
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102184588
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2181234..2195904
location: region:2181234-2195904:1
so has part: feature:2181234-2195904:1:exon
subclass of: SO_0000011

102184588
type: Gene
SIO_000068: ncbigene

position:2181234:1
position: 2181234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2195904:1
position: 2195904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2181234-2195904:1:exon

LOC102184588
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102184588
product: uncharacterized LOC102184588
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_311142.3
SIO_010081: LOC102184588
subclass of: SO_0000673
so part of: LOC102184588
location: join(2181234..2181390,2186341..2186509,2195719..2195904)
location: region:2181234-2195904:1
so has part: feature:2181234-2181390:1:exon
so has part: feature:2186341-2186509:1:exon
so has part: feature:2195719-2195904:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2181234-2181390:1:exon

position:2181390:1
position: 2181390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2186341-2186509:1:exon

position:2186341:1
position: 2186341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2186509:1
position: 2186509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2195719-2195904:1:exon

position:2195719:1
position: 2195719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GLRX3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: GLRX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2612246..2644263)
location: region:2612246-2644263:-1
so has part: feature:2612246-2644263:-1:exon
subclass of: SO_0000010

102175268
type: Gene
SIO_000068: ncbigene

position:2612246:-1
position: 2612246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2644263:-1
position: 2644263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2612246-2644263:-1:exon

GLRX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: GLRX3
product: glutaredoxin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 52 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_018041489.1
SIO_010081: GLRX3
subclass of: SO_0000673
so part of: GLRX3
location: complement(join(2612246..2612517,2617126..2617218,2617326..2617365,2619842..2619894,2621510..2621567,2623677..2623738,2624212..2624384,2629167..2629368,2630046..2630120,2638278..2638386,2644140..2644263))
location: region:2612246-2644263:-1
so has part: feature:2644140-2644263:-1:exon
so has part: feature:2638278-2638386:-1:exon
so has part: feature:2630046-2630120:-1:exon
so has part: feature:2629167-2629368:-1:exon
so has part: feature:2624212-2624384:-1:exon
so has part: feature:2623677-2623738:-1:exon
so has part: feature:2621510-2621567:-1:exon
so has part: feature:2619842-2619894:-1:exon
so has part: feature:2617326-2617365:-1:exon
so has part: feature:2617126-2617218:-1:exon
so has part: feature:2612246-2612517:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2644140-2644263:-1:exon

position:2644140:-1
position: 2644140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2638278-2638386:-1:exon

position:2638278:-1
position: 2638278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2638386:-1
position: 2638386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2630046-2630120:-1:exon

position:2630046:-1
position: 2630046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2630120:-1
position: 2630120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2629167-2629368:-1:exon

position:2629167:-1
position: 2629167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2629368:-1
position: 2629368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2624212-2624384:-1:exon

position:2624212:-1
position: 2624212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2624384:-1
position: 2624384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2623677-2623738:-1:exon

position:2623677:-1
position: 2623677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2623738:-1
position: 2623738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2621510-2621567:-1:exon

position:2621510:-1
position: 2621510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2621567:-1
position: 2621567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2619842-2619894:-1:exon

position:2619842:-1
position: 2619842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2619894:-1
position: 2619894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2617326-2617365:-1:exon

position:2617326:-1
position: 2617326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2617365:-1
position: 2617365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2617126-2617218:-1:exon

position:2617126:-1
position: 2617126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2617218:-1
position: 2617218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2612246-2612517:-1:exon

position:2612517:-1
position: 2612517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GLRX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: GLRX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutaredoxin-3
translation: MAAGAAEAAAAVVEVGSAGQFEELLRLRAKSLLVVHFWAPWAPQCAQMNGVMAELAKEHPQASFVKLEAEAVPEVSEKYEISSVPTFLFFKNSQKIDRLDGAHAPELTKKVQRHASSGSFSPSGSERPKEDLSLRLKKLTHAAPCMLFMKGTPQEPRCGFSKQMVEILNKHNIQFSSFDIFSDEEVRQGLKTYSNWPTYPQLYVSGELIGGLDIIKELEASKELDTICPKAPKLEERLKVLTNKASVMLFMKGNKQEAKCGFSRQILEILNSTGIEYETFDILEDEEVRQGLKAYSNWPTYPQLYVKGELVGGLDIVKELKGSGELLPVLKGESW
SIO_010081: GLRX3
subclass of: SO_0000673
so part of: GLRX3
location: complement(join(2612464..2612517,2617126..2617218,2617326..2617365,2619842..2619894,2621510..2621567,2623677..2623738,2624212..2624384,2629167..2629368,2630046..2630120,2638278..2638386,2644140..2644228))
location: region:2612464-2644228:-1
so has part: feature:2644140-2644228:-1:exon
so has part: feature:2638278-2638386:-1:exon
so has part: feature:2630046-2630120:-1:exon
so has part: feature:2629167-2629368:-1:exon
so has part: feature:2624212-2624384:-1:exon
so has part: feature:2623677-2623738:-1:exon
so has part: feature:2621510-2621567:-1:exon
so has part: feature:2619842-2619894:-1:exon
so has part: feature:2617326-2617365:-1:exon
so has part: feature:2617126-2617218:-1:exon
so has part: feature:2612464-2612517:-1:exon

XP_017896978.1
type: Protein
SIO_000068: ncbiprotein

position:2612464:-1
position: 2612464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2644228:-1
position: 2644228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2644140-2644228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2638278-2638386:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2630046-2630120:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2629167-2629368:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2624212-2624384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2623677-2623738:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2621510-2621567:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2619842-2619894:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2617326-2617365:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2617126-2617218:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2612464-2612517:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2645668..2645739
location: region:2645668-2645739:1
so has part: feature:2645668-2645739:1:exon
subclass of: SO_0000663

108634056
type: Gene
SIO_000068: ncbigene

position:2645668:1
position: 2645668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2645739:1
position: 2645739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2645668-2645739:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2645701..2645703,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 2645668..2645739
location: region:2645668-2645739:1
so has part: feature:2645668-2645739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2645668-2645739:1:exon

LOC102183566
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102183566
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2664802..2692352
location: region:2664802-2692352:1
so has part: feature:2664802-2692352:1:exon
subclass of: SO_0000010

102183566
type: Gene
SIO_000068: ncbigene

position:2664802:1
position: 2664802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2692352:1
position: 2692352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2664802-2692352:1:exon

LOC102183566
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9925
gene: LOC102183566
product: uncharacterized LOC102183566, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001917322.1
SIO_010081: LOC102183566
so part of: LOC102183566
location: join(2664802..2664952,2667524..2667714,2668171..2668442,2681744..2681917,2682014..2682076,2691824..2692352)
location: region:2664802-2692352:1
so has part: feature:2664802-2664952:1:exon
so has part: feature:2667524-2667714:1:exon
so has part: feature:2668171-2668442:1:exon
so has part: feature:2681744-2681917:1:exon
so has part: feature:2682014-2682076:1:exon
so has part: feature:2691824-2692352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2664802-2664952:1:exon

position:2664952:1
position: 2664952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2667524-2667714:1:exon

position:2667524:1
position: 2667524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2667714:1
position: 2667714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2668171-2668442:1:exon

position:2668171:1
position: 2668171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2668442:1
position: 2668442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2681744-2681917:1:exon

position:2681744:1
position: 2681744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2681917:1
position: 2681917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2682014-2682076:1:exon

position:2682014:1
position: 2682014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2682076:1
position: 2682076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2691824-2692352:1:exon

position:2691824:1
position: 2691824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102183566
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102183566
product: uncharacterized LOC102183566, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_018041540.1
SIO_010081: LOC102183566
subclass of: SO_0000673
so part of: LOC102183566
location: join(2664802..2664952,2681744..2681917,2682014..2682076,2691227..2691391,2691824..2692352)
location: region:2664802-2692352:1
so has part: feature:2664802-2664952:1:exon
so has part: feature:2681744-2681917:1:exon
so has part: feature:2682014-2682076:1:exon
so has part: feature:2691227-2691391:1:exon
so has part: feature:2691824-2692352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2664802-2664952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2681744-2681917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2682014-2682076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2691227-2691391:1:exon

position:2691227:1
position: 2691227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2691391:1
position: 2691391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2691824-2692352:1:exon

LOC102183566
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102183566
product: uncharacterized LOC102183566, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_018041541.1
SIO_010081: LOC102183566
subclass of: SO_0000673
so part of: LOC102183566
location: join(2664802..2664952,2681744..2681917,2682014..2682076,2691824..2692352)
location: region:2664802-2692352:1
so has part: feature:2664802-2664952:1:exon
so has part: feature:2681744-2681917:1:exon
so has part: feature:2682014-2682076:1:exon
so has part: feature:2691824-2692352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2664802-2664952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2681744-2681917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2682014-2682076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2691824-2692352:1:exon

LOC102183566
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102183566
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102183566 isoform X5
translation: MDTLALGRWRRRRPEDLQVPGDAKRACRRLDAAAPERDCPQVRVRIPASGGSEEPESLDAQRRGRLPSPRPDSGQRRPGMGGPPDGGRSRAQPCPRCIAGESVLSCGRFEVQVLFLTCPCVELLPVLFVLPPVCLQTNPIQAAWGGMTRHLSRFCMKGHFNHTEGR
SIO_010081: LOC102183566
subclass of: SO_0000673
so part of: LOC102183566
location: join(2664884..2664952,2681744..2681917,2682014..2682076,2691227..2691391,2691824..2691853)
location: region:2664884-2691853:1
so has part: feature:2664884-2664952:1:exon
so has part: feature:2681744-2681917:1:exon
so has part: feature:2682014-2682076:1:exon
so has part: feature:2691227-2691391:1:exon
so has part: feature:2691824-2691853:1:exon

XP_017897029.1
type: Protein
SIO_000068: ncbiprotein

position:2664884:1
position: 2664884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2691853:1
position: 2691853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2664884-2664952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2681744-2681917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2682014-2682076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2691227-2691391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2691824-2691853:1:exon

LOC102183566
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102183566
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102183566 isoform X6
translation: MDTLALGRWRRRRPEDLQVPGDAKRACRRLDAAAPERDCPQVRVRIPASGGSEEPESLDAQRRGRLPSPRPDSGQRRPGMGGPPDGGRSRAQPCPRCIAGESGHFNHTEGR
SIO_010081: LOC102183566
subclass of: SO_0000673
so part of: LOC102183566
location: join(2664884..2664952,2681744..2681917,2682014..2682076,2691824..2691853)
location: region:2664884-2691853:1
so has part: feature:2664884-2664952:1:exon
so has part: feature:2681744-2681917:1:exon
so has part: feature:2682014-2682076:1:exon
so has part: feature:2691824-2691853:1:exon

XP_017897030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2664884-2664952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2681744-2681917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2682014-2682076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2691824-2691853:1:exon

LOC102183566
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9925
gene: LOC102183566
product: uncharacterized LOC102183566, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001917323.1
SIO_010081: LOC102183566
so part of: LOC102183566
location: join(2665120..2665467,2667524..2667714,2668171..2668442,2681744..2681917,2682014..2682076,2691824..2692352)
location: region:2665120-2692352:1
so has part: feature:2665120-2665467:1:exon
so has part: feature:2667524-2667714:1:exon
so has part: feature:2668171-2668442:1:exon
so has part: feature:2681744-2681917:1:exon
so has part: feature:2682014-2682076:1:exon
so has part: feature:2691824-2692352:1:exon

position:2665120:1
position: 2665120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665120-2665467:1:exon

position:2665467:1
position: 2665467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2667524-2667714:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2668171-2668442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2681744-2681917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2682014-2682076:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2691824-2692352:1:exon

LOC102183566
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102183566
product: uncharacterized LOC102183566, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005698603.3
SIO_010081: LOC102183566
subclass of: SO_0000673
so part of: LOC102183566
location: join(2665120..2665467,2681744..2681917,2682014..2682076,2691227..2691391,2691824..2692352)
location: region:2665120-2692352:1
so has part: feature:2665120-2665467:1:exon
so has part: feature:2681744-2681917:1:exon
so has part: feature:2682014-2682076:1:exon
so has part: feature:2691227-2691391:1:exon
so has part: feature:2691824-2692352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2665120-2665467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2681744-2681917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2682014-2682076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2691227-2691391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2691824-2692352:1:exon

LOC102183566
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102183566
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102183566 isoform X4
translation: MCSGLLRRPRRFCVQSQGPSRLLRAAVPESNRHVQALGWVWYGCQASGHSSRLLRESRKRACRRLDAAAPERDCPQVRVRIPASGGSEEPESLDAQRRGRLPSPRPDSGQRRPGMGGPPDGGRSRAQPCPRCIAGESVLSCGRFEVQVLFLTCPCVELLPVLFVLPPVCLQTNPIQAAWGGMTRHLSRFCMKGHFNHTEGR
SIO_010081: LOC102183566
subclass of: SO_0000673
so part of: LOC102183566
location: join(2665294..2665467,2681744..2681917,2682014..2682076,2691227..2691391,2691824..2691853)
location: region:2665294-2691853:1
so has part: feature:2665294-2665467:1:exon
so has part: feature:2681744-2681917:1:exon
so has part: feature:2682014-2682076:1:exon
so has part: feature:2691227-2691391:1:exon
so has part: feature:2691824-2691853:1:exon

XP_005698660.2
type: Protein
SIO_000068: ncbiprotein

position:2665294:1
position: 2665294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665294-2665467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2681744-2681917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2682014-2682076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2691227-2691391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2691824-2691853:1:exon

LOC102183566
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102183566
product: uncharacterized LOC102183566, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_018041537.1
SIO_010081: LOC102183566
subclass of: SO_0000673
so part of: LOC102183566
location: join(2676222..2677240,2681744..2681917,2682014..2682076,2691227..2691391,2691824..2692352)
location: region:2676222-2692352:1
so has part: feature:2676222-2677240:1:exon
so has part: feature:2681744-2681917:1:exon
so has part: feature:2682014-2682076:1:exon
so has part: feature:2691227-2691391:1:exon
so has part: feature:2691824-2692352:1:exon

position:2676222:1
position: 2676222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2676222-2677240:1:exon

position:2677240:1
position: 2677240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2681744-2681917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2682014-2682076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2691227-2691391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2691824-2692352:1:exon

LOC102183566
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102183566
product: uncharacterized LOC102183566, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_018041538.1
SIO_010081: LOC102183566
subclass of: SO_0000673
so part of: LOC102183566
location: join(2676224..2677240,2681744..2681917,2682014..2682076,2691824..2692352)
location: region:2676224-2692352:1
so has part: feature:2676224-2677240:1:exon
so has part: feature:2681744-2681917:1:exon
so has part: feature:2682014-2682076:1:exon
so has part: feature:2691824-2692352:1:exon

position:2676224:1
position: 2676224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2676224-2677240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2681744-2681917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2682014-2682076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2691824-2692352:1:exon

LOC102183566
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102183566
product: uncharacterized LOC102183566, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018041539.1
SIO_010081: LOC102183566
subclass of: SO_0000673
so part of: LOC102183566
location: join(2676224..2676918,2677123..2677240,2681744..2681917,2682014..2682076,2691227..2691391,2691824..2692352)
location: region:2676224-2692352:1
so has part: feature:2676224-2676918:1:exon
so has part: feature:2677123-2677240:1:exon
so has part: feature:2681744-2681917:1:exon
so has part: feature:2682014-2682076:1:exon
so has part: feature:2691227-2691391:1:exon
so has part: feature:2691824-2692352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2676224-2676918:1:exon

position:2676918:1
position: 2676918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2677123-2677240:1:exon

position:2677123:1
position: 2677123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2681744-2681917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2682014-2682076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2691227-2691391:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2691824-2692352:1:exon

LOC102183566
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102183566
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102183566 isoform X1
translation: MECVDLIEKHASGSQSPVHAPLLSFLASDVPQKGARGWGVAAGGRSHPACGRRGARSVSPLLFAWIFFGRTAWHARSLFPDPRWYSGPLRWSHRGLRAGPPGKSHPDSWGLAGNPFTQHASFCSVKAEQILRNRRSRSLVFSSSALPSDSGGTRKAAPLPVTKKRACRRLDAAAPERDCPQVRVRIPASGGSEEPESLDAQRRGRLPSPRPDSGQRRPGMGGPPDGGRSRAQPCPRCIAGESVLSCGRFEVQVLFLTCPCVELLPVLFVLPPVCLQTNPIQAAWGGMTRHLSRFCMKGHFNHTEGR
SIO_010081: LOC102183566
subclass of: SO_0000673
so part of: LOC102183566
location: join(2676752..2677240,2681744..2681917,2682014..2682076,2691227..2691391,2691824..2691853)
location: region:2676752-2691853:1
so has part: feature:2676752-2677240:1:exon
so has part: feature:2681744-2681917:1:exon
so has part: feature:2682014-2682076:1:exon
so has part: feature:2691227-2691391:1:exon
so has part: feature:2691824-2691853:1:exon

XP_017897026.1
type: Protein
SIO_000068: ncbiprotein

position:2676752:1
position: 2676752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2676752-2677240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2681744-2681917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2682014-2682076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2691227-2691391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2691824-2691853:1:exon

LOC102183566
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102183566
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102183566 isoform X2
translation: MECVDLIEKHASGSQSPVHAPLLSFLASDVPQKGARGWGVAAGGRSHPACGRRGARSVSPLLFAWIFFGRTAWHARSLFPDPRWYSGPLRWSHRGLRAGPPGKSHPDSWGLAGNPFTQHASFCSVKAEQILRNRRSRSLVFSSSALPSDSGGTRKAAPLPVTKKRACRRLDAAAPERDCPQVRVRIPASGGSEEPESLDAQRRGRLPSPRPDSGQRRPGMGGPPDGGRSRAQPCPRCIAGESGHFNHTEGR
SIO_010081: LOC102183566
subclass of: SO_0000673
so part of: LOC102183566
location: join(2676752..2677240,2681744..2681917,2682014..2682076,2691824..2691853)
location: region:2676752-2691853:1
so has part: feature:2676752-2677240:1:exon
so has part: feature:2681744-2681917:1:exon
so has part: feature:2682014-2682076:1:exon
so has part: feature:2691824-2691853:1:exon

XP_017897027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2676752-2677240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2681744-2681917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2682014-2682076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2691824-2691853:1:exon

LOC102183566
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102183566
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102183566 isoform X3
translation: MECVDLIEKHASGSQSPVHAPLLSFLASDVPQKGARGWGVAAGGRSHPACGRRGARVKAEQILRNRRSRSLVFSSSALPSDSGGTRKAAPLPVTKKRACRRLDAAAPERDCPQVRVRIPASGGSEEPESLDAQRRGRLPSPRPDSGQRRPGMGGPPDGGRSRAQPCPRCIAGESVLSCGRFEVQVLFLTCPCVELLPVLFVLPPVCLQTNPIQAAWGGMTRHLSRFCMKGHFNHTEGR
SIO_010081: LOC102183566
subclass of: SO_0000673
so part of: LOC102183566
location: join(2676752..2676918,2677123..2677240,2681744..2681917,2682014..2682076,2691227..2691391,2691824..2691853)
location: region:2676752-2691853:1
so has part: feature:2676752-2676918:1:exon
so has part: feature:2677123-2677240:1:exon
so has part: feature:2681744-2681917:1:exon
so has part: feature:2682014-2682076:1:exon
so has part: feature:2691227-2691391:1:exon
so has part: feature:2691824-2691853:1:exon

XP_017897028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2676752-2676918:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2677123-2677240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2681744-2681917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2682014-2682076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2691227-2691391:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2691824-2691853:1:exon

EBF3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: EBF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2764700..2884031
location: region:2764700-2884031:1
so has part: feature:2764700-2884031:1:exon
subclass of: SO_0000010

102174998
type: Gene
SIO_000068: ncbigene

position:2764700:1
position: 2764700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2884031:1
position: 2884031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2764700-2884031:1:exon

EBF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: EBF3
product: early B-cell factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041657.1
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2764700..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847778,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2878482..2878670,2879064..2879261,2880212..2880324,2881403..2884031)
location: region:2764700-2884031:1
so has part: feature:2764700-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847778:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2878482-2878670:1:exon
so has part: feature:2879064-2879261:1:exon
so has part: feature:2880212-2880324:1:exon
so has part: feature:2881403-2884031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2764700-2765343:1:exon

position:2765343:1
position: 2765343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

position:2765449:1
position: 2765449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2765605:1
position: 2765605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

position:2765970:1
position: 2765970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2766033:1
position: 2766033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

position:2766729:1
position: 2766729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2766784:1
position: 2766784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

position:2769829:1
position: 2769829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2769902:1
position: 2769902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

position:2771502:1
position: 2771502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2771570:1
position: 2771570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

position:2844102:1
position: 2844102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2844183:1
position: 2844183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847778:1:exon

position:2847634:1
position: 2847634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2847778:1
position: 2847778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

position:2853110:1
position: 2853110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2853240:1
position: 2853240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

position:2853732:1
position: 2853732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2853858:1
position: 2853858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

position:2871630:1
position: 2871630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2871718:1
position: 2871718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

position:2876640:1
position: 2876640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2876705:1
position: 2876705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

position:2877283:1
position: 2877283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2877460:1
position: 2877460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2878482-2878670:1:exon

position:2878482:1
position: 2878482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2878670:1
position: 2878670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2879064-2879261:1:exon

position:2879064:1
position: 2879064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2879261:1
position: 2879261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2880212-2880324:1:exon

position:2880212:1
position: 2880212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2880324:1
position: 2880324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2881403-2884031:1:exon

position:2881403:1
position: 2881403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EBF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: EBF3
product: early B-cell factor 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041659.1
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2764700..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847778,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2878482..2878670,2879064..2879261,2881403..2884031)
location: region:2764700-2884031:1
so has part: feature:2764700-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847778:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2878482-2878670:1:exon
so has part: feature:2879064-2879261:1:exon
so has part: feature:2881403-2884031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2764700-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2878482-2878670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2879064-2879261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2881403-2884031:1:exon

EBF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: EBF3
product: early B-cell factor 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041661.1
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2764700..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847778,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2878482..2878670,2879172..2879261,2880212..2880324,2881403..2884031)
location: region:2764700-2884031:1
so has part: feature:2764700-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847778:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2878482-2878670:1:exon
so has part: feature:2879172-2879261:1:exon
so has part: feature:2880212-2880324:1:exon
so has part: feature:2881403-2884031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2764700-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2878482-2878670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2879172-2879261:1:exon

position:2879172:1
position: 2879172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2880212-2880324:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2881403-2884031:1:exon

EBF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: EBF3
product: early B-cell factor 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041663.1
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2764700..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847778,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2878482..2878670,2879172..2879261,2881403..2884031)
location: region:2764700-2884031:1
so has part: feature:2764700-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847778:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2878482-2878670:1:exon
so has part: feature:2879172-2879261:1:exon
so has part: feature:2881403-2884031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2764700-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2878482-2878670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2879172-2879261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2881403-2884031:1:exon

EBF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: EBF3
product: early B-cell factor 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041665.1
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2764700..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847778,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2879172..2879261,2880212..2880324,2881403..2884031)
location: region:2764700-2884031:1
so has part: feature:2764700-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847778:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2879172-2879261:1:exon
so has part: feature:2880212-2880324:1:exon
so has part: feature:2881403-2884031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2764700-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2879172-2879261:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2880212-2880324:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2881403-2884031:1:exon

EBF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: EBF3
product: early B-cell factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018041658.1
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2764700..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847751,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2878482..2878670,2879064..2879261,2880212..2880324,2881403..2884031)
location: region:2764700-2884031:1
so has part: feature:2764700-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847751:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2878482-2878670:1:exon
so has part: feature:2879064-2879261:1:exon
so has part: feature:2880212-2880324:1:exon
so has part: feature:2881403-2884031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2764700-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847751:1:exon

position:2847751:1
position: 2847751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2878482-2878670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2879064-2879261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2880212-2880324:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2881403-2884031:1:exon

EBF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: EBF3
product: early B-cell factor 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018041662.1
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2764700..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847751,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2878482..2878670,2879064..2879261,2881403..2884031)
location: region:2764700-2884031:1
so has part: feature:2764700-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847751:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2878482-2878670:1:exon
so has part: feature:2879064-2879261:1:exon
so has part: feature:2881403-2884031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2764700-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847751:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2878482-2878670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2879064-2879261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2881403-2884031:1:exon

EBF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: EBF3
product: early B-cell factor 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 14 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018041664.1
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2764700..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847751,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2878482..2878670,2879172..2879261,2881403..2884031)
location: region:2764700-2884031:1
so has part: feature:2764700-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847751:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2878482-2878670:1:exon
so has part: feature:2879172-2879261:1:exon
so has part: feature:2881403-2884031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2764700-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847751:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2878482-2878670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2879172-2879261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2881403-2884031:1:exon

EBF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: EBF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor COE3 isoform X3
translation: MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGVRTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLENATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYAPSSTPQQSNYSTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANSPYGIVPSSPTMAASSVTLPSNCSSTHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVPPM
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2765210..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847778,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2878482..2878670,2879064..2879261,2881403..2881434)
location: region:2765210-2881434:1
so has part: feature:2765210-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847778:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2878482-2878670:1:exon
so has part: feature:2879064-2879261:1:exon
so has part: feature:2881403-2881434:1:exon

XP_017897148.1
type: Protein
SIO_000068: ncbiprotein

position:2765210:1
position: 2765210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2881434:1
position: 2881434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2765210-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2878482-2878670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2879064-2879261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2881403-2881434:1:exon

EBF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: EBF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor COE3 isoform X6
translation: MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGVRTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLENATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYAPSSTPQQSNYSTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANSPYGMKQKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVPPM
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2765210..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847778,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2878482..2878670,2879172..2879261,2881403..2881434)
location: region:2765210-2881434:1
so has part: feature:2765210-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847778:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2878482-2878670:1:exon
so has part: feature:2879172-2879261:1:exon
so has part: feature:2881403-2881434:1:exon

XP_017897152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2765210-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2878482-2878670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2879172-2879261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2881403-2881434:1:exon

EBF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: EBF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor COE3 isoform X5
translation: MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGVRTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYAPSSTPQQSNYSTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANSPYGIVPSSPTMAASSVTLPSNCSSTHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVPPM
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2765210..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847751,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2878482..2878670,2879064..2879261,2881403..2881434)
location: region:2765210-2881434:1
so has part: feature:2765210-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847751:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2878482-2878670:1:exon
so has part: feature:2879064-2879261:1:exon
so has part: feature:2881403-2881434:1:exon

XP_017897151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2765210-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847751:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2878482-2878670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2879064-2879261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2881403-2881434:1:exon

EBF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: EBF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor COE3 isoform X7
translation: MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGVRTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYAPSSTPQQSNYSTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANSPYGMKQKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVPPM
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2765210..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847751,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2878482..2878670,2879172..2879261,2881403..2881434)
location: region:2765210-2881434:1
so has part: feature:2765210-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847751:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2878482-2878670:1:exon
so has part: feature:2879172-2879261:1:exon
so has part: feature:2881403-2881434:1:exon

XP_017897153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2765210-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847751:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2878482-2878670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2879172-2879261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2881403-2881434:1:exon

EBF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: EBF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor COE3 isoform X1
translation: MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGVRTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLENATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYAPSSTPQQSNYSTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANSPYGIVPSSPTMAASSVTLPSNCSSTHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGLQGSLLGAEDATVEKTNWPFCEVGGIFHFDELMLKKGTGKLCLGW
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2765210..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847778,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2878482..2878670,2879064..2879261,2880212..2880324,2881403..2881420)
location: region:2765210-2881420:1
so has part: feature:2765210-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847778:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2878482-2878670:1:exon
so has part: feature:2879064-2879261:1:exon
so has part: feature:2880212-2880324:1:exon
so has part: feature:2881403-2881420:1:exon

XP_017897146.1
type: Protein
SIO_000068: ncbiprotein

position:2881420:1
position: 2881420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2765210-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2878482-2878670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2879064-2879261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2880212-2880324:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2881403-2881420:1:exon

EBF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: EBF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor COE3 isoform X4
translation: MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGVRTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLENATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYAPSSTPQQSNYSTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANSPYGMKQKSAFAPVVRPQASPPPSCTSANGNGLQGSLLGAEDATVEKTNWPFCEVGGIFHFDELMLKKGTGKLCLGW
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2765210..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847778,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2878482..2878670,2879172..2879261,2880212..2880324,2881403..2881420)
location: region:2765210-2881420:1
so has part: feature:2765210-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847778:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2878482-2878670:1:exon
so has part: feature:2879172-2879261:1:exon
so has part: feature:2880212-2880324:1:exon
so has part: feature:2881403-2881420:1:exon

XP_017897150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2765210-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2878482-2878670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2879172-2879261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2880212-2880324:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2881403-2881420:1:exon

EBF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: EBF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor COE3 isoform X8
translation: MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGVRTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLENATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQANDQVKQKSAFAPVVRPQASPPPSCTSANGNGLQGSLLGAEDATVEKTNWPFCEVGGIFHFDELMLKKGTGKLCLGW
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2765210..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847778,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2879172..2879261,2880212..2880324,2881403..2881420)
location: region:2765210-2881420:1
so has part: feature:2765210-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847778:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2879172-2879261:1:exon
so has part: feature:2880212-2880324:1:exon
so has part: feature:2881403-2881420:1:exon

XP_017897154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2765210-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2879172-2879261:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2880212-2880324:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2881403-2881420:1:exon

EBF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: EBF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor COE3 isoform X2
translation: MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGVRTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTLGNTPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSRNTSSVSPRGYAPSSTPQQSNYSTVSTSMNGYGSGAMANLGVPGSPGFLNGSSANSPYGIVPSSPTMAASSVTLPSNCSSTHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGLQGSLLGAEDATVEKTNWPFCEVGGIFHFDELMLKKGTGKLCLGW
SIO_010081: EBF3
subclass of: SO_0000673
so part of: EBF3
location: join(2765210..2765343,2765449..2765605,2765970..2766033,2766729..2766784,2769829..2769902,2771502..2771570,2844102..2844183,2847634..2847751,2853110..2853240,2853732..2853858,2871630..2871718,2876640..2876705,2877283..2877460,2878482..2878670,2879064..2879261,2880212..2880324,2881403..2881420)
location: region:2765210-2881420:1
so has part: feature:2765210-2765343:1:exon
so has part: feature:2765449-2765605:1:exon
so has part: feature:2765970-2766033:1:exon
so has part: feature:2766729-2766784:1:exon
so has part: feature:2769829-2769902:1:exon
so has part: feature:2771502-2771570:1:exon
so has part: feature:2844102-2844183:1:exon
so has part: feature:2847634-2847751:1:exon
so has part: feature:2853110-2853240:1:exon
so has part: feature:2853732-2853858:1:exon
so has part: feature:2871630-2871718:1:exon
so has part: feature:2876640-2876705:1:exon
so has part: feature:2877283-2877460:1:exon
so has part: feature:2878482-2878670:1:exon
so has part: feature:2879064-2879261:1:exon
so has part: feature:2880212-2880324:1:exon
so has part: feature:2881403-2881420:1:exon

XP_017897147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2765210-2765343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2765449-2765605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765970-2766033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766729-2766784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2769829-2769902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2771502-2771570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844102-2844183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2847634-2847751:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2853110-2853240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2853732-2853858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2871630-2871718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876640-2876705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2877283-2877460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2878482-2878670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2879064-2879261:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2880212-2880324:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2881403-2881420:1:exon

MGMT
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: MGMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2948041..3213061)
location: region:2948041-3213061:-1
so has part: feature:2948041-3213061:-1:exon
subclass of: SO_0000010

106503649
type: Gene
SIO_000068: ncbigene

position:2948041:-1
position: 2948041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3213061:-1
position: 3213061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2948041-3213061:-1:exon

MGMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: MGMT
product: O-6-methylguanine-DNA methyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_018041611.1
SIO_010081: MGMT
subclass of: SO_0000673
so part of: MGMT
location: complement(join(2948041..2948372,2954505..2954644,2987474..2987631,3162258..3162394,3212964..3213061))
location: region:2948041-3213061:-1
so has part: feature:3212964-3213061:-1:exon
so has part: feature:3162258-3162394:-1:exon
so has part: feature:2987474-2987631:-1:exon
so has part: feature:2954505-2954644:-1:exon
so has part: feature:2948041-2948372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3212964-3213061:-1:exon

position:3212964:-1
position: 3212964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3162258-3162394:-1:exon

position:3162258:-1
position: 3162258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3162394:-1
position: 3162394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2987474-2987631:-1:exon

position:2987474:-1
position: 2987474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2987631:-1
position: 2987631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2954505-2954644:-1:exon

position:2954505:-1
position: 2954505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2954644:-1
position: 2954644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2948041-2948372:-1:exon

position:2948372:-1
position: 2948372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MGMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: MGMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylated-DNA--protein-cysteine methyltransferase
translation: MDETCEMKYRVMDSPLGKLEISGCEQGLHGIKLHGGKTPDTGPAEATAPAEQLGGPGAVQPLLQCAAWLDAYFREPAVLEGLPVPALHHPIFQKESFTRQVLWKLLKLVKFGETVSYQQLAALAGNPRAARAVGGAMRSNPIPILIPCHRVVCSSGAMGNYSGGVGVKEWLLAHEGHPARKAARGGGSCATSSWRGALGNTTSSQPTGRD
SIO_010081: MGMT
subclass of: SO_0000673
so part of: MGMT
location: complement(join(2948163..2948372,2954505..2954644,2987474..2987631,3162258..3162382))
location: region:2948163-3162382:-1
so has part: feature:3162258-3162382:-1:exon
so has part: feature:2987474-2987631:-1:exon
so has part: feature:2954505-2954644:-1:exon
so has part: feature:2948163-2948372:-1:exon

XP_017897100.1
type: Protein
SIO_000068: ncbiprotein

position:2948163:-1
position: 2948163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3162382:-1
position: 3162382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3162258-3162382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2987474-2987631:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2954505-2954644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2948163-2948372:-1:exon

TRNAW-CCA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAW-CCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3376183..3376254
location: region:3376183-3376254:1
so has part: feature:3376183-3376254:1:exon
subclass of: SO_0000663

108634062
type: Gene
SIO_000068: ncbigene

position:3376183:1
position: 3376183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3376254:1
position: 3376254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3376183-3376254:1:exon

TRNAW-CCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAW-CCA
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tryptophan (anticodon CCA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3376216..3376218,aa:Trp,seq:cca)
SIO_010081: TRNAW-CCA
subclass of: SO_0000673
so part of: TRNAW-CCA
location: 3376183..3376254
location: region:3376183-3376254:1
so has part: feature:3376183-3376254:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3376183-3376254:1:exon

LOC106503640
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3616909..3617259
location: region:3616909-3617259:1
so has part: feature:3616909-3617259:1:exon

106503640
type: Gene
SIO_000068: ncbigene

position:3616909:1
position: 3616909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3617259:1
position: 3617259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3616909-3617259:1:exon

LOC106503640
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC106503640
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC106503640
subclass of: SO_0000673
so part of: LOC106503640
location: 3616909..3617259
location: region:3616909-3617259:1
so has part: feature:3616909-3617259:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3616909-3617259:1:exon

MKI67
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: MKI67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4510843..4540461
location: region:4510843-4540461:1
so has part: feature:4510843-4540461:1:exon
subclass of: SO_0000010

102183289
type: Gene
SIO_000068: ncbigene

position:4510843:1
position: 4510843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4540461:1
position: 4540461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4510843-4540461:1:exon

MKI67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: MKI67
product: marker of proliferation Ki-67, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005698601.3
SIO_010081: MKI67
subclass of: SO_0000673
so part of: MKI67
location: join(4510843..4511046,4511435..4511606,4513994..4514072,4514163..4514278,4517882..4517948,4520034..4520079,4520521..4521621,4523003..4523178,4524343..4524664,4524756..4524874,4524975..4525146,4527683..4527838,4529743..4536524,4537818..4538261,4539156..4540461)
location: region:4510843-4540461:1
so has part: feature:4510843-4511046:1:exon
so has part: feature:4511435-4511606:1:exon
so has part: feature:4513994-4514072:1:exon
so has part: feature:4514163-4514278:1:exon
so has part: feature:4517882-4517948:1:exon
so has part: feature:4520034-4520079:1:exon
so has part: feature:4520521-4521621:1:exon
so has part: feature:4523003-4523178:1:exon
so has part: feature:4524343-4524664:1:exon
so has part: feature:4524756-4524874:1:exon
so has part: feature:4524975-4525146:1:exon
so has part: feature:4527683-4527838:1:exon
so has part: feature:4529743-4536524:1:exon
so has part: feature:4537818-4538261:1:exon
so has part: feature:4539156-4540461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4510843-4511046:1:exon

position:4511046:1
position: 4511046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4511435-4511606:1:exon

position:4511435:1
position: 4511435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4511606:1
position: 4511606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4513994-4514072:1:exon

position:4513994:1
position: 4513994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4514072:1
position: 4514072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4514163-4514278:1:exon

position:4514163:1
position: 4514163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4514278:1
position: 4514278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4517882-4517948:1:exon

position:4517882:1
position: 4517882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4517948:1
position: 4517948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4520034-4520079:1:exon

position:4520034:1
position: 4520034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4520079:1
position: 4520079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4520521-4521621:1:exon

position:4520521:1
position: 4520521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4521621:1
position: 4521621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4523003-4523178:1:exon

position:4523003:1
position: 4523003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4523178:1
position: 4523178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4524343-4524664:1:exon

position:4524343:1
position: 4524343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4524664:1
position: 4524664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4524756-4524874:1:exon

position:4524756:1
position: 4524756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4524874:1
position: 4524874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4524975-4525146:1:exon

position:4524975:1
position: 4524975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4525146:1
position: 4525146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4527683-4527838:1:exon

position:4527683:1
position: 4527683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4527838:1
position: 4527838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4529743-4536524:1:exon

position:4529743:1
position: 4529743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4536524:1
position: 4536524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4537818-4538261:1:exon

position:4537818:1
position: 4537818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4538261:1
position: 4538261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4539156-4540461:1:exon

position:4539156:1
position: 4539156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MKI67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: MKI67
product: marker of proliferation Ki-67, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_018041459.1
SIO_010081: MKI67
subclass of: SO_0000673
so part of: MKI67
location: join(4510843..4511046,4511435..4511606,4513994..4514072,4514163..4514278,4517882..4517948,4520034..4520079,4520524..4521621,4523003..4523178,4524343..4524664,4524756..4524874,4524975..4525146,4527683..4527838,4529743..4536524,4537818..4538261,4539156..4540461)
location: region:4510843-4540461:1
so has part: feature:4510843-4511046:1:exon
so has part: feature:4511435-4511606:1:exon
so has part: feature:4513994-4514072:1:exon
so has part: feature:4514163-4514278:1:exon
so has part: feature:4517882-4517948:1:exon
so has part: feature:4520034-4520079:1:exon
so has part: feature:4520524-4521621:1:exon
so has part: feature:4523003-4523178:1:exon
so has part: feature:4524343-4524664:1:exon
so has part: feature:4524756-4524874:1:exon
so has part: feature:4524975-4525146:1:exon
so has part: feature:4527683-4527838:1:exon
so has part: feature:4529743-4536524:1:exon
so has part: feature:4537818-4538261:1:exon
so has part: feature:4539156-4540461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4510843-4511046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4511435-4511606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4513994-4514072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4514163-4514278:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4517882-4517948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4520034-4520079:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4520524-4521621:1:exon

position:4520524:1
position: 4520524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4523003-4523178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4524343-4524664:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4524756-4524874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4524975-4525146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4527683-4527838:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4529743-4536524:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4537818-4538261:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4539156-4540461:1:exon

MKI67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: MKI67
product: marker of proliferation Ki-67, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018041458.1
SIO_010081: MKI67
subclass of: SO_0000673
so part of: MKI67
location: join(4510843..4511046,4511512..4511606,4513994..4514072,4514163..4514278,4517882..4517948,4520034..4520079,4520521..4521621,4523003..4523178,4524343..4524664,4524756..4524874,4524975..4525146,4527683..4527838,4529743..4536524,4537818..4538261,4539156..4540461)
location: region:4510843-4540461:1
so has part: feature:4510843-4511046:1:exon
so has part: feature:4511512-4511606:1:exon
so has part: feature:4513994-4514072:1:exon
so has part: feature:4514163-4514278:1:exon
so has part: feature:4517882-4517948:1:exon
so has part: feature:4520034-4520079:1:exon
so has part: feature:4520521-4521621:1:exon
so has part: feature:4523003-4523178:1:exon
so has part: feature:4524343-4524664:1:exon
so has part: feature:4524756-4524874:1:exon
so has part: feature:4524975-4525146:1:exon
so has part: feature:4527683-4527838:1:exon
so has part: feature:4529743-4536524:1:exon
so has part: feature:4537818-4538261:1:exon
so has part: feature:4539156-4540461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4510843-4511046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4511512-4511606:1:exon

position:4511512:1
position: 4511512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4513994-4514072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4514163-4514278:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4517882-4517948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4520034-4520079:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4520521-4521621:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4523003-4523178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4524343-4524664:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4524756-4524874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4524975-4525146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4527683-4527838:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4529743-4536524:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4537818-4538261:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4539156-4540461:1:exon

MKI67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: MKI67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen KI-67 isoform X1
translation: MGPTRRLVTIKRSGVDGPHFPLSLRTCVFGRGIECDIRIQLPVVSKQHCKIEISEQEAVLFNLSSTNPTQINGSTFDKPVQLEHGDVITIVDRSFRYENESHQDGSKSPGFPGQRRDQEASRRVSRSSLSSNPEGKAQDSSACSEVTEEAVSGRPVAHGEDITAAHAIWGHWEDDVARKTPSHVRSSELPGDTHRGATDPTTGDSKEDPSVASGACCEEPKAFSSIQYLKRSDQSESPFRKLYESMKVELDVNPGKVSVLQNRRKSGPQRHCTTGRESTDGLQHETLVSPKSRWKSGRSPHMTADPGLGEQGSSQTEGEGSGEPVQMPKELKSPGIACTETETRKTRTPVQCSQQTTMPLRCSPHSPSRRRRSANPGAGGGRVSQSLDQSEGSRADDQMFTPQKSLPENQTPVKVGSFGNTPEKLFSRKRKSVPANVDRLTAETEIPPPMISASLALQVERKIQSDLLNKPEKLGPATGQVGPGLSGLDAAEISSFGDSTNKMEGVAAKRRRVSFGGCLRPELFDENLPPNTPLKRGETPKQRRSLAAHTPTVLKKIIKEQPQPSGKEDSSEVRLEVTSPDAFMSSPAANAVHASAATPDRCRRLSKASCVSGVGRSPHQTDVPRKGGRRSSSLPPQRASLERSQHGILQTIFSRRRSGASEANLIVARSWADVVKLGAKQAQNKAVKRGLPKQPGRRQRRANTPKKPPGPVHSQFSTGHANSPCTIVIGKAQLEKVTVPARPYRVINNFMVSKPRDFSEDLSGLPEMFKTPGKEKPQRMSMCPPTFPNSEDLLGEELPGPLSGEKPLLCTLENFGENVFPRTQDTAKGPSDQSSASPALRRPSIKMSEDPVKTPRSANKTAAAEMKTPVSTAATPKATSSANRSRRSVELSSVHTPGTGPENQDAKPNTVKDILGRRLRKTPQPEPKLERDTKQSEESFKQCKQNIESKENSEKTIAVRRSRRASELKCEPAADLTTLQRSQDTEPEEKQLDILSLLQTPVHAKEVTDAENKATKMTCKSPEPGAISTPTRMSTQLKTPSQKVDVGGFSDLRKLSETPGKATPTQREPRDAKSIQLFKETPKQKLGPAENSAGSKRRPRTPKGKAPPLEDLAGFKELFQTPHQAKEPMTDDKTTKTPCKSPQSEPVNTPSRRGHLRTPSQKVNVQEDLSALRKPQQTPGKTTLSPREAEAGDRRIAVSREAPEEMPDLAGKAPSAKRRPRTPKGKAQSLEDLTGFKELFQTPDQAREQMTDAKTTKTPYKSPAETVNTPSRRGRLRTPSQKVDVEEELSSLRKPQQTPKGTGHSDREPADGDEDIKVSKEMPRQKMDPADYVTGIKRQSRTPKEDVQSLEDLTGFRELFQTPTHTKLPKAIVKTPRMLGQSPQLKPVNITPTRRGRLRTPSQKVDMQEDLSALRKPQQTPGETTQSPREPEAGDRRIAVSREAPEEMLDLAEDVPATKRRSRTPKGKTPLLEDLAGFKELFQTPHQAKETMADEKPTIPCKSPPAEPVNIPTSKKRRLKSPPREVGIEEELSVLRRPAQTPGGTRHSGEAAGDGEDIKAFMETPRQKLDPAENVTGIKRQLRTPKEKVQSLEDLTGFRELFQTPDHTKEQRAVLKTPQMLCTSSQPELTVTPTNRQRQLRTLLGKVDTEKELSVLRRPIPASGQTMHTWCREPGDEDKITESFKETPKQKLGPAENSAGSKRRPRTPKGKAPPLEDLAGFKELFQTPHQAKEPMTDDKTTKTPCKSPQSEPVNTPSRRGHLRTPSQKVNVQEDLSALRKPQQTPGKTTLSPREAEAGDRRIAVSQEAPEEMPDLAGKAPSAKRRPRTPKGKAQSLEDLTGFKELFQTPDQAREQMTDAKTTKTPYKSPAETVNTPTSKKRRLKSPPREVGIEEELSVLRRSARTPGGTRHSGEAAGDFEDIKAFTGTPRQKLDPAENVTGIKRQLRTPKEKVQSLEDLTGFRELFQTPDHTKEPRAVLKTHMMLCQSPPLEPVNITPGR…
SIO_010081: MKI67
subclass of: SO_0000673
so part of: MKI67
location: join(4511515..4511606,4513994..4514072,4514163..4514278,4517882..4517948,4520034..4520079,4520521..4521621,4523003..4523178,4524343..4524664,4524756..4524874,4524975..4525146,4527683..4527838,4529743..4536524,4537818..4538261,4539156..4539221)
location: region:4511515-4539221:1
so has part: feature:4511515-4511606:1:exon
so has part: feature:4513994-4514072:1:exon
so has part: feature:4514163-4514278:1:exon
so has part: feature:4517882-4517948:1:exon
so has part: feature:4520034-4520079:1:exon
so has part: feature:4520521-4521621:1:exon
so has part: feature:4523003-4523178:1:exon
so has part: feature:4524343-4524664:1:exon
so has part: feature:4524756-4524874:1:exon
so has part: feature:4524975-4525146:1:exon
so has part: feature:4527683-4527838:1:exon
so has part: feature:4529743-4536524:1:exon
so has part: feature:4537818-4538261:1:exon
so has part: feature:4539156-4539221:1:exon

XP_005698658.2
type: Protein
SIO_000068: ncbiprotein

position:4511515:1
position: 4511515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4539221:1
position: 4539221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4511515-4511606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4513994-4514072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4514163-4514278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4517882-4517948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4520034-4520079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4520521-4521621:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4523003-4523178:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4524343-4524664:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4524756-4524874:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4524975-4525146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4527683-4527838:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4529743-4536524:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4537818-4538261:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4539156-4539221:1:exon

MKI67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: MKI67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen KI-67 isoform X1
translation: MGPTRRLVTIKRSGVDGPHFPLSLRTCVFGRGIECDIRIQLPVVSKQHCKIEISEQEAVLFNLSSTNPTQINGSTFDKPVQLEHGDVITIVDRSFRYENESHQDGSKSPGFPGQRRDQEASRRVSRSSLSSNPEGKAQDSSACSEVTEEAVSGRPVAHGEDITAAHAIWGHWEDDVARKTPSHVRSSELPGDTHRGATDPTTGDSKEDPSVASGACCEEPKAFSSIQYLKRSDQSESPFRKLYESMKVELDVNPGKVSVLQNRRKSGPQRHCTTGRESTDGLQHETLVSPKSRWKSGRSPHMTADPGLGEQGSSQTEGEGSGEPVQMPKELKSPGIACTETETRKTRTPVQCSQQTTMPLRCSPHSPSRRRRSANPGAGGGRVSQSLDQSEGSRADDQMFTPQKSLPENQTPVKVGSFGNTPEKLFSRKRKSVPANVDRLTAETEIPPPMISASLALQVERKIQSDLLNKPEKLGPATGQVGPGLSGLDAAEISSFGDSTNKMEGVAAKRRRVSFGGCLRPELFDENLPPNTPLKRGETPKQRRSLAAHTPTVLKKIIKEQPQPSGKEDSSEVRLEVTSPDAFMSSPAANAVHASAATPDRCRRLSKASCVSGVGRSPHQTDVPRKGGRRSSSLPPQRASLERSQHGILQTIFSRRRSGASEANLIVARSWADVVKLGAKQAQNKAVKRGLPKQPGRRQRRANTPKKPPGPVHSQFSTGHANSPCTIVIGKAQLEKVTVPARPYRVINNFMVSKPRDFSEDLSGLPEMFKTPGKEKPQRMSMCPPTFPNSEDLLGEELPGPLSGEKPLLCTLENFGENVFPRTQDTAKGPSDQSSASPALRRPSIKMSEDPVKTPRSANKTAAAEMKTPVSTAATPKATSSANRSRRSVELSSVHTPGTGPENQDAKPNTVKDILGRRLRKTPQPEPKLERDTKQSEESFKQCKQNIESKENSEKTIAVRRSRRASELKCEPAADLTTLQRSQDTEPEEKQLDILSLLQTPVHAKEVTDAENKATKMTCKSPEPGAISTPTRMSTQLKTPSQKVDVGGFSDLRKLSETPGKATPTQREPRDAKSIQLFKETPKQKLGPAENSAGSKRRPRTPKGKAPPLEDLAGFKELFQTPHQAKEPMTDDKTTKTPCKSPQSEPVNTPSRRGHLRTPSQKVNVQEDLSALRKPQQTPGKTTLSPREAEAGDRRIAVSREAPEEMPDLAGKAPSAKRRPRTPKGKAQSLEDLTGFKELFQTPDQAREQMTDAKTTKTPYKSPAETVNTPSRRGRLRTPSQKVDVEEELSSLRKPQQTPKGTGHSDREPADGDEDIKVSKEMPRQKMDPADYVTGIKRQSRTPKEDVQSLEDLTGFRELFQTPTHTKLPKAIVKTPRMLGQSPQLKPVNITPTRRGRLRTPSQKVDMQEDLSALRKPQQTPGETTQSPREPEAGDRRIAVSREAPEEMLDLAEDVPATKRRSRTPKGKTPLLEDLAGFKELFQTPHQAKETMADEKPTIPCKSPPAEPVNIPTSKKRRLKSPPREVGIEEELSVLRRPAQTPGGTRHSGEAAGDGEDIKAFMETPRQKLDPAENVTGIKRQLRTPKEKVQSLEDLTGFRELFQTPDHTKEQRAVLKTPQMLCTSSQPELTVTPTNRQRQLRTLLGKVDTEKELSVLRRPIPASGQTMHTWCREPGDEDKITESFKETPKQKLGPAENSAGSKRRPRTPKGKAPPLEDLAGFKELFQTPHQAKEPMTDDKTTKTPCKSPQSEPVNTPSRRGHLRTPSQKVNVQEDLSALRKPQQTPGKTTLSPREAEAGDRRIAVSQEAPEEMPDLAGKAPSAKRRPRTPKGKAQSLEDLTGFKELFQTPDQAREQMTDAKTTKTPYKSPAETVNTPTSKKRRLKSPPREVGIEEELSVLRRSARTPGGTRHSGEAAGDFEDIKAFTGTPRQKLDPAENVTGIKRQLRTPKEKVQSLEDLTGFRELFQTPDHTKEPRAVLKTHMMLCQSPPLEPVNITPGR…
SIO_010081: MKI67
subclass of: SO_0000673
so part of: MKI67
location: join(4511515..4511606,4513994..4514072,4514163..4514278,4517882..4517948,4520034..4520079,4520521..4521621,4523003..4523178,4524343..4524664,4524756..4524874,4524975..4525146,4527683..4527838,4529743..4536524,4537818..4538261,4539156..4539221)
location: region:4511515-4539221:1
so has part: feature:4511515-4511606:1:exon
so has part: feature:4513994-4514072:1:exon
so has part: feature:4514163-4514278:1:exon
so has part: feature:4517882-4517948:1:exon
so has part: feature:4520034-4520079:1:exon
so has part: feature:4520521-4521621:1:exon
so has part: feature:4523003-4523178:1:exon
so has part: feature:4524343-4524664:1:exon
so has part: feature:4524756-4524874:1:exon
so has part: feature:4524975-4525146:1:exon
so has part: feature:4527683-4527838:1:exon
so has part: feature:4529743-4536524:1:exon
so has part: feature:4537818-4538261:1:exon
so has part: feature:4539156-4539221:1:exon

XP_017896947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4511515-4511606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4513994-4514072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4514163-4514278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4517882-4517948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4520034-4520079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4520521-4521621:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4523003-4523178:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4524343-4524664:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4524756-4524874:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4524975-4525146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4527683-4527838:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4529743-4536524:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4537818-4538261:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4539156-4539221:1:exon

MKI67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: MKI67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen KI-67 isoform X2
translation: MGPTRRLVTIKRSGVDGPHFPLSLRTCVFGRGIECDIRIQLPVVSKQHCKIEISEQEAVLFNLSSTNPTQINGSTFDKPVQLEHGDVITIVDRSFRYENESHQDGSKSPGFPGQRRDQEASRRVSRSSLSSNPGKAQDSSACSEVTEEAVSGRPVAHGEDITAAHAIWGHWEDDVARKTPSHVRSSELPGDTHRGATDPTTGDSKEDPSVASGACCEEPKAFSSIQYLKRSDQSESPFRKLYESMKVELDVNPGKVSVLQNRRKSGPQRHCTTGRESTDGLQHETLVSPKSRWKSGRSPHMTADPGLGEQGSSQTEGEGSGEPVQMPKELKSPGIACTETETRKTRTPVQCSQQTTMPLRCSPHSPSRRRRSANPGAGGGRVSQSLDQSEGSRADDQMFTPQKSLPENQTPVKVGSFGNTPEKLFSRKRKSVPANVDRLTAETEIPPPMISASLALQVERKIQSDLLNKPEKLGPATGQVGPGLSGLDAAEISSFGDSTNKMEGVAAKRRRVSFGGCLRPELFDENLPPNTPLKRGETPKQRRSLAAHTPTVLKKIIKEQPQPSGKEDSSEVRLEVTSPDAFMSSPAANAVHASAATPDRCRRLSKASCVSGVGRSPHQTDVPRKGGRRSSSLPPQRASLERSQHGILQTIFSRRRSGASEANLIVARSWADVVKLGAKQAQNKAVKRGLPKQPGRRQRRANTPKKPPGPVHSQFSTGHANSPCTIVIGKAQLEKVTVPARPYRVINNFMVSKPRDFSEDLSGLPEMFKTPGKEKPQRMSMCPPTFPNSEDLLGEELPGPLSGEKPLLCTLENFGENVFPRTQDTAKGPSDQSSASPALRRPSIKMSEDPVKTPRSANKTAAAEMKTPVSTAATPKATSSANRSRRSVELSSVHTPGTGPENQDAKPNTVKDILGRRLRKTPQPEPKLERDTKQSEESFKQCKQNIESKENSEKTIAVRRSRRASELKCEPAADLTTLQRSQDTEPEEKQLDILSLLQTPVHAKEVTDAENKATKMTCKSPEPGAISTPTRMSTQLKTPSQKVDVGGFSDLRKLSETPGKATPTQREPRDAKSIQLFKETPKQKLGPAENSAGSKRRPRTPKGKAPPLEDLAGFKELFQTPHQAKEPMTDDKTTKTPCKSPQSEPVNTPSRRGHLRTPSQKVNVQEDLSALRKPQQTPGKTTLSPREAEAGDRRIAVSREAPEEMPDLAGKAPSAKRRPRTPKGKAQSLEDLTGFKELFQTPDQAREQMTDAKTTKTPYKSPAETVNTPSRRGRLRTPSQKVDVEEELSSLRKPQQTPKGTGHSDREPADGDEDIKVSKEMPRQKMDPADYVTGIKRQSRTPKEDVQSLEDLTGFRELFQTPTHTKLPKAIVKTPRMLGQSPQLKPVNITPTRRGRLRTPSQKVDMQEDLSALRKPQQTPGETTQSPREPEAGDRRIAVSREAPEEMLDLAEDVPATKRRSRTPKGKTPLLEDLAGFKELFQTPHQAKETMADEKPTIPCKSPPAEPVNIPTSKKRRLKSPPREVGIEEELSVLRRPAQTPGGTRHSGEAAGDGEDIKAFMETPRQKLDPAENVTGIKRQLRTPKEKVQSLEDLTGFRELFQTPDHTKEQRAVLKTPQMLCTSSQPELTVTPTNRQRQLRTLLGKVDTEKELSVLRRPIPASGQTMHTWCREPGDEDKITESFKETPKQKLGPAENSAGSKRRPRTPKGKAPPLEDLAGFKELFQTPHQAKEPMTDDKTTKTPCKSPQSEPVNTPSRRGHLRTPSQKVNVQEDLSALRKPQQTPGKTTLSPREAEAGDRRIAVSQEAPEEMPDLAGKAPSAKRRPRTPKGKAQSLEDLTGFKELFQTPDQAREQMTDAKTTKTPYKSPAETVNTPTSKKRRLKSPPREVGIEEELSVLRRSARTPGGTRHSGEAAGDFEDIKAFTGTPRQKLDPAENVTGIKRQLRTPKEKVQSLEDLTGFRELFQTPDHTKEPRAVLKTHMMLCQSPPLEPVNITPGRR…
SIO_010081: MKI67
subclass of: SO_0000673
so part of: MKI67
location: join(4511515..4511606,4513994..4514072,4514163..4514278,4517882..4517948,4520034..4520079,4520524..4521621,4523003..4523178,4524343..4524664,4524756..4524874,4524975..4525146,4527683..4527838,4529743..4536524,4537818..4538261,4539156..4539221)
location: region:4511515-4539221:1
so has part: feature:4511515-4511606:1:exon
so has part: feature:4513994-4514072:1:exon
so has part: feature:4514163-4514278:1:exon
so has part: feature:4517882-4517948:1:exon
so has part: feature:4520034-4520079:1:exon
so has part: feature:4520524-4521621:1:exon
so has part: feature:4523003-4523178:1:exon
so has part: feature:4524343-4524664:1:exon
so has part: feature:4524756-4524874:1:exon
so has part: feature:4524975-4525146:1:exon
so has part: feature:4527683-4527838:1:exon
so has part: feature:4529743-4536524:1:exon
so has part: feature:4537818-4538261:1:exon
so has part: feature:4539156-4539221:1:exon

XP_017896948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4511515-4511606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4513994-4514072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4514163-4514278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4517882-4517948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4520034-4520079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4520524-4521621:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4523003-4523178:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4524343-4524664:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4524756-4524874:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4524975-4525146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4527683-4527838:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4529743-4536524:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4537818-4538261:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4539156-4539221:1:exon

PTPRE
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: PTPRE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4545185..4724742)
location: region:4545185-4724742:-1
so has part: feature:4545185-4724742:-1:exon
subclass of: SO_0000010

102174718
type: Gene
SIO_000068: ncbigene

position:4545185:-1
position: 4545185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4724742:-1
position: 4724742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4545185-4724742:-1:exon

PTPRE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PTPRE
product: protein tyrosine phosphatase, receptor type E, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 33 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_018041550.1
SIO_010081: PTPRE
subclass of: SO_0000673
so part of: PTPRE
location: complement(join(4545185..4548043,4550628..4550763,4552493..4552659,4553836..4553961,4557286..4557420,4558194..4558270,4559560..4559653,4560006..4560155,4560420..4560555,4563479..4563642,4564949..4565068,4568849..4568946,4571192..4571228,4572097..4572173,4577122..4577212,4582679..4582815,4585246..4585319,4585609..4585708,4591354..4591481,4652522..4652544,4724683..4724742))
location: region:4545185-4724742:-1
so has part: feature:4724683-4724742:-1:exon
so has part: feature:4652522-4652544:-1:exon
so has part: feature:4591354-4591481:-1:exon
so has part: feature:4585609-4585708:-1:exon
so has part: feature:4585246-4585319:-1:exon
so has part: feature:4582679-4582815:-1:exon
so has part: feature:4577122-4577212:-1:exon
so has part: feature:4572097-4572173:-1:exon
so has part: feature:4571192-4571228:-1:exon
so has part: feature:4568849-4568946:-1:exon
so has part: feature:4564949-4565068:-1:exon
so has part: feature:4563479-4563642:-1:exon
so has part: feature:4560420-4560555:-1:exon
so has part: feature:4560006-4560155:-1:exon
so has part: feature:4559560-4559653:-1:exon
so has part: feature:4558194-4558270:-1:exon
so has part: feature:4557286-4557420:-1:exon
so has part: feature:4553836-4553961:-1:exon
so has part: feature:4552493-4552659:-1:exon
so has part: feature:4550628-4550763:-1:exon
so has part: feature:4545185-4548043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4724683-4724742:-1:exon

position:4724683:-1
position: 4724683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4652522-4652544:-1:exon

position:4652522:-1
position: 4652522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4652544:-1
position: 4652544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4591354-4591481:-1:exon

position:4591354:-1
position: 4591354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4591481:-1
position: 4591481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4585609-4585708:-1:exon

position:4585609:-1
position: 4585609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4585708:-1
position: 4585708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4585246-4585319:-1:exon

position:4585246:-1
position: 4585246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4585319:-1
position: 4585319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4582679-4582815:-1:exon

position:4582679:-1
position: 4582679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4582815:-1
position: 4582815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4577122-4577212:-1:exon

position:4577122:-1
position: 4577122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4577212:-1
position: 4577212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4572097-4572173:-1:exon

position:4572097:-1
position: 4572097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4572173:-1
position: 4572173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4571192-4571228:-1:exon

position:4571192:-1
position: 4571192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4571228:-1
position: 4571228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4568849-4568946:-1:exon

position:4568849:-1
position: 4568849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4568946:-1
position: 4568946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4564949-4565068:-1:exon

position:4564949:-1
position: 4564949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4565068:-1
position: 4565068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4563479-4563642:-1:exon

position:4563479:-1
position: 4563479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4563642:-1
position: 4563642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4560420-4560555:-1:exon

position:4560420:-1
position: 4560420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4560555:-1
position: 4560555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4560006-4560155:-1:exon

position:4560006:-1
position: 4560006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4560155:-1
position: 4560155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4559560-4559653:-1:exon

position:4559560:-1
position: 4559560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4559653:-1
position: 4559653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4558194-4558270:-1:exon

position:4558194:-1
position: 4558194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4558270:-1
position: 4558270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4557286-4557420:-1:exon

position:4557286:-1
position: 4557286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4557420:-1
position: 4557420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4553836-4553961:-1:exon

position:4553836:-1
position: 4553836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4553961:-1
position: 4553961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4552493-4552659:-1:exon

position:4552493:-1
position: 4552493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4552659:-1
position: 4552659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4550628-4550763:-1:exon

position:4550628:-1
position: 4550628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4550763:-1
position: 4550763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4545185-4548043:-1:exon

position:4548043:-1
position: 4548043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PTPRE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PTPRE
product: protein tyrosine phosphatase, receptor type E, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 33 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018041551.1
SIO_010081: PTPRE
subclass of: SO_0000673
so part of: PTPRE
location: complement(join(4545185..4548043,4550628..4550763,4552493..4552659,4553836..4553961,4557286..4557420,4558194..4558270,4559560..4559653,4560006..4560155,4560420..4560555,4563479..4563642,4564949..4565068,4568849..4568946,4571192..4571228,4572097..4572173,4577122..4577212,4582679..4582815,4585246..4585319,4585609..4585708,4591354..4591481,4652522..4652544,4724420..4724554))
location: region:4545185-4724554:-1
so has part: feature:4724420-4724554:-1:exon
so has part: feature:4652522-4652544:-1:exon
so has part: feature:4591354-4591481:-1:exon
so has part: feature:4585609-4585708:-1:exon
so has part: feature:4585246-4585319:-1:exon
so has part: feature:4582679-4582815:-1:exon
so has part: feature:4577122-4577212:-1:exon
so has part: feature:4572097-4572173:-1:exon
so has part: feature:4571192-4571228:-1:exon
so has part: feature:4568849-4568946:-1:exon
so has part: feature:4564949-4565068:-1:exon
so has part: feature:4563479-4563642:-1:exon
so has part: feature:4560420-4560555:-1:exon
so has part: feature:4560006-4560155:-1:exon
so has part: feature:4559560-4559653:-1:exon
so has part: feature:4558194-4558270:-1:exon
so has part: feature:4557286-4557420:-1:exon
so has part: feature:4553836-4553961:-1:exon
so has part: feature:4552493-4552659:-1:exon
so has part: feature:4550628-4550763:-1:exon
so has part: feature:4545185-4548043:-1:exon

position:4724554:-1
position: 4724554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4724420-4724554:-1:exon

position:4724420:-1
position: 4724420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4652522-4652544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4591354-4591481:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4585609-4585708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4585246-4585319:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4582679-4582815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4577122-4577212:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4572097-4572173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4571192-4571228:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4568849-4568946:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4564949-4565068:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4563479-4563642:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4560420-4560555:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4560006-4560155:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4559560-4559653:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4558194-4558270:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4557286-4557420:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4553836-4553961:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4552493-4552659:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4550628-4550763:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4545185-4548043:-1:exon

PTPRE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PTPRE
product: protein tyrosine phosphatase, receptor type E, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 33 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_018041552.1
SIO_010081: PTPRE
subclass of: SO_0000673
so part of: PTPRE
location: complement(join(4545185..4548043,4550628..4550763,4552493..4552659,4553836..4553961,4557286..4557420,4558194..4558270,4559560..4559653,4560006..4560155,4560420..4560555,4563479..4563642,4564949..4565068,4568849..4568946,4571192..4571228,4572097..4572173,4577122..4577212,4582679..4582815,4585246..4585319,4585420..4585504))
location: region:4545185-4585504:-1
so has part: feature:4585420-4585504:-1:exon
so has part: feature:4585246-4585319:-1:exon
so has part: feature:4582679-4582815:-1:exon
so has part: feature:4577122-4577212:-1:exon
so has part: feature:4572097-4572173:-1:exon
so has part: feature:4571192-4571228:-1:exon
so has part: feature:4568849-4568946:-1:exon
so has part: feature:4564949-4565068:-1:exon
so has part: feature:4563479-4563642:-1:exon
so has part: feature:4560420-4560555:-1:exon
so has part: feature:4560006-4560155:-1:exon
so has part: feature:4559560-4559653:-1:exon
so has part: feature:4558194-4558270:-1:exon
so has part: feature:4557286-4557420:-1:exon
so has part: feature:4553836-4553961:-1:exon
so has part: feature:4552493-4552659:-1:exon
so has part: feature:4550628-4550763:-1:exon
so has part: feature:4545185-4548043:-1:exon

position:4585504:-1
position: 4585504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4585420-4585504:-1:exon

position:4585420:-1
position: 4585420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4585246-4585319:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4582679-4582815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4577122-4577212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4572097-4572173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4571192-4571228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4568849-4568946:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4564949-4565068:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4563479-4563642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4560420-4560555:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4560006-4560155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4559560-4559653:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4558194-4558270:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4557286-4557420:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4553836-4553961:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4552493-4552659:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4550628-4550763:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4545185-4548043:-1:exon

PTPRE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PTPRE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase epsilon isoform X1
translation: MEPFCPFLLAGVSLPLAKALKGNETTTATAAQSNWTSTTAGPPAPGTPQPLLAWLLLPLLAFLLFLLLAAYFFRFRKQRKAVVSANDKKMPNGILEEQEQQRVMLLSRSPSGPKKYFPIPVTHLEDEIRARSADDCKRFREEFNSLPSGHVQGTFELANKEENREKNRYPNILPNDHSRVILSQVDGIPCSDYINASYIDGYKEKNKFIAAQGPKQETVNDFWRMIWEQKCATIVMLTNLKERKEEKCHQYWPDQGCWTYGHIRVCVEDCVALVDYTVRKFCIQSQLPDGCKAPRLVCQLHFTSWPDFGVPFTPIGMLKFLKKVRTLNPAHAGPIVVHCSAGVGRTGTFIVIDAMMDMMHAEQKVDVFDFVSRIRNQRPQMVQTDMQYTFIYQALLEYYLYGDTELDVSSLEKHLQALQGPTAHFDKIGLEEEFRKLTNVRIMKENMRTGNLPANMKKARVIQIIPYDFNRVILSMKRGQEYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMVWEWKCHTIVMLTEVQEREQDKCYQYWPTEGSVTHGEITIEIKSDTLSEAISIRDFLVTFNQPLARPEEQMRAVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQSGNHPITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFIDIFSDYANFK
SIO_010081: PTPRE
subclass of: SO_0000673
so part of: PTPRE
location: complement(join(4547969..4548043,4550628..4550763,4552493..4552659,4553836..4553961,4557286..4557420,4558194..4558270,4559560..4559653,4560006..4560155,4560420..4560555,4563479..4563642,4564949..4565068,4568849..4568946,4571192..4571228,4572097..4572173,4577122..4577212,4582679..4582815,4585246..4585319,4585609..4585708,4591354..4591474))
location: region:4547969-4591474:-1
so has part: feature:4591354-4591474:-1:exon
so has part: feature:4585609-4585708:-1:exon
so has part: feature:4585246-4585319:-1:exon
so has part: feature:4582679-4582815:-1:exon
so has part: feature:4577122-4577212:-1:exon
so has part: feature:4572097-4572173:-1:exon
so has part: feature:4571192-4571228:-1:exon
so has part: feature:4568849-4568946:-1:exon
so has part: feature:4564949-4565068:-1:exon
so has part: feature:4563479-4563642:-1:exon
so has part: feature:4560420-4560555:-1:exon
so has part: feature:4560006-4560155:-1:exon
so has part: feature:4559560-4559653:-1:exon
so has part: feature:4558194-4558270:-1:exon
so has part: feature:4557286-4557420:-1:exon
so has part: feature:4553836-4553961:-1:exon
so has part: feature:4552493-4552659:-1:exon
so has part: feature:4550628-4550763:-1:exon
so has part: feature:4547969-4548043:-1:exon

XP_017897039.1
type: Protein
SIO_000068: ncbiprotein

position:4547969:-1
position: 4547969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4591474:-1
position: 4591474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4591354-4591474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4585609-4585708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4585246-4585319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4582679-4582815:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4577122-4577212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4572097-4572173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4571192-4571228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4568849-4568946:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4564949-4565068:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4563479-4563642:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4560420-4560555:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4560006-4560155:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4559560-4559653:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4558194-4558270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4557286-4557420:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4553836-4553961:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4552493-4552659:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4550628-4550763:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4547969-4548043:-1:exon

PTPRE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PTPRE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase epsilon isoform X1
translation: MEPFCPFLLAGVSLPLAKALKGNETTTATAAQSNWTSTTAGPPAPGTPQPLLAWLLLPLLAFLLFLLLAAYFFRFRKQRKAVVSANDKKMPNGILEEQEQQRVMLLSRSPSGPKKYFPIPVTHLEDEIRARSADDCKRFREEFNSLPSGHVQGTFELANKEENREKNRYPNILPNDHSRVILSQVDGIPCSDYINASYIDGYKEKNKFIAAQGPKQETVNDFWRMIWEQKCATIVMLTNLKERKEEKCHQYWPDQGCWTYGHIRVCVEDCVALVDYTVRKFCIQSQLPDGCKAPRLVCQLHFTSWPDFGVPFTPIGMLKFLKKVRTLNPAHAGPIVVHCSAGVGRTGTFIVIDAMMDMMHAEQKVDVFDFVSRIRNQRPQMVQTDMQYTFIYQALLEYYLYGDTELDVSSLEKHLQALQGPTAHFDKIGLEEEFRKLTNVRIMKENMRTGNLPANMKKARVIQIIPYDFNRVILSMKRGQEYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMVWEWKCHTIVMLTEVQEREQDKCYQYWPTEGSVTHGEITIEIKSDTLSEAISIRDFLVTFNQPLARPEEQMRAVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQSGNHPITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFIDIFSDYANFK
SIO_010081: PTPRE
subclass of: SO_0000673
so part of: PTPRE
location: complement(join(4547969..4548043,4550628..4550763,4552493..4552659,4553836..4553961,4557286..4557420,4558194..4558270,4559560..4559653,4560006..4560155,4560420..4560555,4563479..4563642,4564949..4565068,4568849..4568946,4571192..4571228,4572097..4572173,4577122..4577212,4582679..4582815,4585246..4585319,4585609..4585708,4591354..4591474))
location: region:4547969-4591474:-1
so has part: feature:4591354-4591474:-1:exon
so has part: feature:4585609-4585708:-1:exon
so has part: feature:4585246-4585319:-1:exon
so has part: feature:4582679-4582815:-1:exon
so has part: feature:4577122-4577212:-1:exon
so has part: feature:4572097-4572173:-1:exon
so has part: feature:4571192-4571228:-1:exon
so has part: feature:4568849-4568946:-1:exon
so has part: feature:4564949-4565068:-1:exon
so has part: feature:4563479-4563642:-1:exon
so has part: feature:4560420-4560555:-1:exon
so has part: feature:4560006-4560155:-1:exon
so has part: feature:4559560-4559653:-1:exon
so has part: feature:4558194-4558270:-1:exon
so has part: feature:4557286-4557420:-1:exon
so has part: feature:4553836-4553961:-1:exon
so has part: feature:4552493-4552659:-1:exon
so has part: feature:4550628-4550763:-1:exon
so has part: feature:4547969-4548043:-1:exon

XP_017897040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4591354-4591474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4585609-4585708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4585246-4585319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4582679-4582815:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4577122-4577212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4572097-4572173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4571192-4571228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4568849-4568946:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4564949-4565068:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4563479-4563642:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4560420-4560555:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4560006-4560155:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4559560-4559653:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4558194-4558270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4557286-4557420:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4553836-4553961:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4552493-4552659:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4550628-4550763:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4547969-4548043:-1:exon

PTPRE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PTPRE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase epsilon isoform X2
translation: MSSRSSFSRLTWFRKQRKAVVSANDKKMPNGILEEQEQQRVMLLSRSPSGPKKYFPIPVTHLEDEIRARSADDCKRFREEFNSLPSGHVQGTFELANKEENREKNRYPNILPNDHSRVILSQVDGIPCSDYINASYIDGYKEKNKFIAAQGPKQETVNDFWRMIWEQKCATIVMLTNLKERKEEKCHQYWPDQGCWTYGHIRVCVEDCVALVDYTVRKFCIQSQLPDGCKAPRLVCQLHFTSWPDFGVPFTPIGMLKFLKKVRTLNPAHAGPIVVHCSAGVGRTGTFIVIDAMMDMMHAEQKVDVFDFVSRIRNQRPQMVQTDMQYTFIYQALLEYYLYGDTELDVSSLEKHLQALQGPTAHFDKIGLEEEFRKLTNVRIMKENMRTGNLPANMKKARVIQIIPYDFNRVILSMKRGQEYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMVWEWKCHTIVMLTEVQEREQDKCYQYWPTEGSVTHGEITIEIKSDTLSEAISIRDFLVTFNQPLARPEEQMRAVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQSGNHPITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFIDIFSDYANFK
SIO_010081: PTPRE
subclass of: SO_0000673
so part of: PTPRE
location: complement(join(4547969..4548043,4550628..4550763,4552493..4552659,4553836..4553961,4557286..4557420,4558194..4558270,4559560..4559653,4560006..4560155,4560420..4560555,4563479..4563642,4564949..4565068,4568849..4568946,4571192..4571228,4572097..4572173,4577122..4577212,4582679..4582815,4585246..4585319,4585420..4585454))
location: region:4547969-4585454:-1
so has part: feature:4585420-4585454:-1:exon
so has part: feature:4585246-4585319:-1:exon
so has part: feature:4582679-4582815:-1:exon
so has part: feature:4577122-4577212:-1:exon
so has part: feature:4572097-4572173:-1:exon
so has part: feature:4571192-4571228:-1:exon
so has part: feature:4568849-4568946:-1:exon
so has part: feature:4564949-4565068:-1:exon
so has part: feature:4563479-4563642:-1:exon
so has part: feature:4560420-4560555:-1:exon
so has part: feature:4560006-4560155:-1:exon
so has part: feature:4559560-4559653:-1:exon
so has part: feature:4558194-4558270:-1:exon
so has part: feature:4557286-4557420:-1:exon
so has part: feature:4553836-4553961:-1:exon
so has part: feature:4552493-4552659:-1:exon
so has part: feature:4550628-4550763:-1:exon
so has part: feature:4547969-4548043:-1:exon

XP_017897041.1
type: Protein
SIO_000068: ncbiprotein

position:4585454:-1
position: 4585454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4585420-4585454:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4585246-4585319:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4582679-4582815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4577122-4577212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4572097-4572173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4571192-4571228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4568849-4568946:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4564949-4565068:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4563479-4563642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4560420-4560555:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4560006-4560155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4559560-4559653:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4558194-4558270:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4557286-4557420:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4553836-4553961:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4552493-4552659:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4550628-4550763:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4547969-4548043:-1:exon

CLRN3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CLRN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4741746..4759364
location: region:4741746-4759364:1
so has part: feature:4741746-4759364:1:exon
subclass of: SO_0000010

102183036
type: Gene
SIO_000068: ncbigene

position:4741746:1
position: 4741746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4759364:1
position: 4759364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4741746-4759364:1:exon

CLRN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CLRN3
product: clarin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005698600.3
SIO_010081: CLRN3
subclass of: SO_0000673
so part of: CLRN3
location: join(4741746..4742127,4751019..4751198,4757918..4759364)
location: region:4741746-4759364:1
so has part: feature:4741746-4742127:1:exon
so has part: feature:4751019-4751198:1:exon
so has part: feature:4757918-4759364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4741746-4742127:1:exon

position:4742127:1
position: 4742127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4751019-4751198:1:exon

position:4751019:1
position: 4751019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4751198:1
position: 4751198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4757918-4759364:1:exon

position:4757918:1
position: 4757918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CLRN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CLRN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clarin-3
translation: MPTAKKTLTFLLSFVTSLGAFVVLCVVLATQQWIRSTIAISDSSSNGSVIITYGLLRGKSIQELNHGLAEPDKNFEVLGTLTNSSPKTLHSVVIVFLALGLFSSLLSAGFTFYNSVSNPYQTFLGPMGVYTWSGLSASFTFITMVLFVGNTQSNRLSEELAQRLYPLYPAATQQGTSHTYGYSFWLTLLVILLNVVTAVIIIFYQKARYQRKQEQRKPMESAPRDGILF
SIO_010081: CLRN3
subclass of: SO_0000673
so part of: CLRN3
location: join(4741899..4742127,4751019..4751198,4757918..4758198)
location: region:4741899-4758198:1
so has part: feature:4741899-4742127:1:exon
so has part: feature:4751019-4751198:1:exon
so has part: feature:4757918-4758198:1:exon

XP_005698657.1
type: Protein
SIO_000068: ncbiprotein

position:4741899:1
position: 4741899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4758198:1
position: 4758198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4741899-4742127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4751019-4751198:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4757918-4758198:1:exon

FOXI2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: FOXI2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4852064..4853882)
location: region:4852064-4853882:-1
so has part: feature:4852064-4853882:-1:exon
subclass of: SO_0000010

108634016
type: Gene
SIO_000068: ncbigene

position:4852064:-1
position: 4852064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4853882:-1
position: 4853882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4852064-4853882:-1:exon

FOXI2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FOXI2
product: forkhead box I2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018041141.1
SIO_010081: FOXI2
subclass of: SO_0000673
so part of: FOXI2
location: complement(join(4852064..4852703,4853387..4853882))
location: region:4852064-4853882:-1
so has part: feature:4853387-4853882:-1:exon
so has part: feature:4852064-4852703:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4853387-4853882:-1:exon

position:4853387:-1
position: 4853387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4852064-4852703:-1:exon

position:4852703:-1
position: 4852703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FOXI2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FOXI2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein I2
translation: MAEYGDGSGPSAAPHGQARAAARLSGYARGDLGAVGAGQRLWLNAPALSSASYAPGPVPAAPYGAPGPLLAAPSGLAGADLAWLSLPGQQELLRLVRPPYSYSALIAMAIQSAPRRKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRGEASAVAPSGPRSQAGARAPDLEPLGAASADLRASASPPAPEAATCFSSLASAVGALAGGFNPFPGGLAGDFSFGRPTTIAAHSPQVPRPAPGFAAGQQMAATGFHVGHFVYTREGTEV
SIO_010081: FOXI2
subclass of: SO_0000673
so part of: FOXI2
location: complement(join(4852261..4852703,4853387..4853882))
location: region:4852261-4853882:-1
so has part: feature:4853387-4853882:-1:exon
so has part: feature:4852261-4852703:-1:exon