Capra hircus breed San Clemente chromosome 24, ASM170441v1, whole genome shotgun sequence.
type: Entry
definition: Capra hircus breed San Clemente chromosome 24, ASM170441v1, whole genome shotgun sequence.
sequence version: NC_030831.1
sequence date: 2016-09-08
sequence: sequence
division: CON
label: NC_030831.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA340281
dblink: SAMN03863711
keyword: WGS
keyword: RefSeq
source: Capra hircus (goat)
organism: Capra hircus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra.
reference: 1
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM004585.1.\nAssembly name: ASM170441v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the USDA ARS on 2016/08/24. The\noriginal whole-genome shotgun project has the accession\nLWLT00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: USDA ARS\nAssembly Date :: MAR-2016\nAssembly Method :: Celera Assembler v. 8.2; BioNano Genomics\n Irys v. APRIL-2015; Lachesis Hi-C v.\n JUNE-2015\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Capra hircus Annotation Release 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 62310066
topology: linear
so has quality: SO_0000987
location: 1..62310066
location: region:1-62310066:1
RO_0002162: 9925

NC_030831
type: RefSeq
SIO_000068: refseq

PRJNA340281
type: BioProject
SIO_000068: bioproject

SAMN03863711
type: BioSample
SIO_000068: biosample

1
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62310066:1
position: 62310066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-62310066:1:source
so part of: sequence
organism: Capra hircus
mol type: genomic DNA
chromosome: 24
sex: male
tissue type: blood
dev stage: adult
breed: San Clemente

9925
type: Taxonomy
SIO_000068: taxonomy

LOC108633756
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108633756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4159..11414
location: region:4159-11414:1
so has part: feature:4159-11414:1:exon

108633756
type: Gene
SIO_000068: ncbigene

position:4159:1
position: 4159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11414:1
position: 11414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4159-11414:1:exon

LOC108633756
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633756
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC108633756
subclass of: SO_0000673
so part of: LOC108633756
location: 4159..4411
location: region:4159-4411:1
so has part: feature:4159-4411:1:exon

position:4411:1
position: 4411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4159-4411:1:exon

LOC108633756
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633756
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC108633756
subclass of: SO_0000673
so part of: LOC108633756
location: 4545..5203
location: region:4545-5203:1
so has part: feature:4545-5203:1:exon

position:4545:1
position: 4545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5203:1
position: 5203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4545-5203:1:exon

LOC108633756
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633756
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC108633756
subclass of: SO_0000673
so part of: LOC108633756
location: 11394..11414
location: region:11394-11414:1
so has part: feature:11394-11414:1:exon

position:11394:1
position: 11394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11394-11414:1:exon

LOC108633757
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108633757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 11558..12507
location: region:11558-12507:1
so has part: feature:11558-12507:1:exon

108633757
type: Gene
SIO_000068: ncbigene

position:11558:1
position: 11558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12507:1
position: 12507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11558-12507:1:exon

LOC108633757
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633757
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC108633757
subclass of: SO_0000673
so part of: LOC108633757
location: 11558..12507
location: region:11558-12507:1
so has part: feature:11558-12507:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11558-12507:1:exon

LOC102182462
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102182462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 21809..22744
location: region:21809-22744:1
so has part: feature:21809-22744:1:exon
subclass of: SO_0000010

102182462
type: Gene
SIO_000068: ncbigene

position:21809:1
position: 21809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22744:1
position: 22744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21809-22744:1:exon

LOC102182462
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102182462
product: olfactory receptor 5L2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005696936.2
SIO_010081: LOC102182462
subclass of: SO_0000673
so part of: LOC102182462
location: 21809..22744
location: region:21809-22744:1
so has part: feature:21809-22744:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21809-22744:1:exon

LOC102182462
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102182462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 5L2-like
translation: MDKENCTAVTGFILLGFSDAPELRVFLFLLFLSIYGVTVWGNLGMIALIQVSSGLHTPMYFFLSHLSFVDFCYSTTITPKMPANILKEDRAISFLECTVQFYLFCTFGVTEVVLLAVMAYDRFVAICDPLLYMVTMSRNLCVELVSCCYLSGTLCSVIRLCLALQIPSYRSNVINHFFCDLPPLLSLACSDVTVNQLVLYIVATFNEVITIVVILTSYLFILITILRMHSAEGRCKAFSTCASHLAAIAVLQGTILFIYCRPHSGNSMDTDKVATVFYTVVIPMVNPLVDSLRNKDLQEALRKVVSSKIFS
SIO_010081: LOC102182462
subclass of: SO_0000673
so part of: LOC102182462
location: 21809..22744
location: region:21809-22744:1
so has part: feature:21809-22744:1:exon

XP_005696993.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21809-22744:1:exon

LOC102182745
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102182745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 30109..31026
location: region:30109-31026:1
so has part: feature:30109-31026:1:exon

102182745
type: Gene
SIO_000068: ncbigene

position:30109:1
position: 30109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31026:1
position: 31026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30109-31026:1:exon

LOC102182745
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102182745
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC102182745
subclass of: SO_0000673
so part of: LOC102182745
location: 30109..31026
location: region:30109-31026:1
so has part: feature:30109-31026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30109-31026:1:exon

LOC102185414
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102185414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 42856..43782
location: region:42856-43782:1
so has part: feature:42856-43782:1:exon
subclass of: SO_0000010

102185414
type: Gene
SIO_000068: ncbigene

position:42856:1
position: 42856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43782:1
position: 43782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42856-43782:1:exon

LOC102185414
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102185414
product: olfactory receptor 5L2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005696942.2
SIO_010081: LOC102185414
subclass of: SO_0000673
so part of: LOC102185414
location: 42856..43782
location: region:42856-43782:1
so has part: feature:42856-43782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42856-43782:1:exon

LOC102185414
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102185414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 5L2-like
translation: MDKENCTAVTGFILLGFSDAPELRVFLFLLFLSIYGVTVWGNLGMIALIQVSSGLHTPMYFFLSHLSFVDFCYSTTITPKMLANILNEDRAISFLECTVQFYLFCTFGVTEVVLLAVMAYDRFVAISDPLLYMVTMSRNLCVELVSCCYLNGTVCSVIHLCLALQIPSYRSNVINHFFCDLPPLLSLACSDVTVNQLVLYIVATFNEVITIVVILMSYLFILITILRMHSAEGRCKAFSTCASHLTVLQGTILFIYCRPHSGNSMDTDKVATVFYTVVIPMVNPLIYSLRNKDVKEALRKVVNSKILS
SIO_010081: LOC102185414
subclass of: SO_0000673
so part of: LOC102185414
location: 42856..43782
location: region:42856-43782:1
so has part: feature:42856-43782:1:exon

XP_005696999.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42856-43782:1:exon

LOC102185700
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102185700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 54985..55925
location: region:54985-55925:1
so has part: feature:54985-55925:1:exon

102185700
type: Gene
SIO_000068: ncbigene

position:54985:1
position: 54985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55925:1
position: 55925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54985-55925:1:exon

LOC102185700
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102185700
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC102185700
subclass of: SO_0000673
so part of: LOC102185700
location: 54985..55925
location: region:54985-55925:1
so has part: feature:54985-55925:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54985-55925:1:exon

LOC102185965
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102185965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(76115..77047)
location: region:76115-77047:-1
so has part: feature:76115-77047:-1:exon
subclass of: SO_0000010

102185965
type: Gene
SIO_000068: ncbigene

position:76115:-1
position: 76115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77047:-1
position: 77047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76115-77047:-1:exon

LOC102185965
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102185965
product: olfactory receptor 5I1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_018039342.1
SIO_010081: LOC102185965
subclass of: SO_0000673
so part of: LOC102185965
location: complement(76115..77047)
location: region:76115-77047:-1
so has part: feature:76115-77047:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76115-77047:-1:exon

LOC102185965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102185965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 5I1-like
translation: MEVENSTVKTQFFLLGFSDHPELQSVLFAVFLSIYSVTLMGNLGMILLITASPPLHTPMYFFLRILSFVDACYSSVIAPKLLVDLVSEKKTISYSGCAAQLYFFCCLVDTESFLLTVMAYDRYIAICNPLLYTVIMSKRICCQLAIGAFLGGTMSSVIHTTNTFHLSFCSNEINHFFCDISPLFSLSCTDTYIHDIVLVVFASLVEALCLLTVLLSYILIIAAILKTESADGRGKGFSTCASHLIVVSIYHGTLIFIYLRPSAGHSLDIDKVTSVFYTLIIPMLNPLIYSLRNKDVKNAFRKMISRKFLS
SIO_010081: LOC102185965
subclass of: SO_0000673
so part of: LOC102185965
location: complement(76115..77047)
location: region:76115-77047:-1
so has part: feature:76115-77047:-1:exon

XP_017894831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76115-77047:-1:exon

LOC108633758
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108633758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(86945..90400)
location: region:86945-90400:-1
so has part: feature:86945-90400:-1:exon

108633758
type: Gene
SIO_000068: ncbigene

position:86945:-1
position: 86945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90400:-1
position: 90400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86945-90400:-1:exon

LOC108633758
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633758
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC108633758
subclass of: SO_0000673
so part of: LOC108633758
location: complement(86945..87865)
location: region:86945-87865:-1
so has part: feature:86945-87865:-1:exon

position:87865:-1
position: 87865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86945-87865:-1:exon

LOC108633758
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633758
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC108633758
subclass of: SO_0000673
so part of: LOC108633758
location: complement(90397..90400)
location: region:90397-90400:-1
so has part: feature:90397-90400:-1:exon

position:90397:-1
position: 90397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90397-90400:-1:exon

LOC108633759
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108633759
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(103629..104565)
location: region:103629-104565:-1
so has part: feature:103629-104565:-1:exon

108633759
type: Gene
SIO_000068: ncbigene

position:103629:-1
position: 103629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104565:-1
position: 104565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103629-104565:-1:exon

LOC108633759
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633759
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC108633759
subclass of: SO_0000673
so part of: LOC108633759
location: complement(103629..104565)
location: region:103629-104565:-1
so has part: feature:103629-104565:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103629-104565:-1:exon

LOC106503527
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503527
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(107655..108586)
location: region:107655-108586:-1
so has part: feature:107655-108586:-1:exon
subclass of: SO_0000010

106503527
type: Gene
SIO_000068: ncbigene

position:107655:-1
position: 107655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108586:-1
position: 108586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107655-108586:-1:exon

LOC106503527
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC106503527
product: olfactory receptor-like protein OLF2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_013974217.2
SIO_010081: LOC106503527
subclass of: SO_0000673
so part of: LOC106503527
location: complement(107655..108586)
location: region:107655-108586:-1
so has part: feature:107655-108586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107655-108586:-1:exon

LOC106503527
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC106503527
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: olfactory receptor-like protein OLF2
translation: MDGENCTSLGEFLLLGISSSSAVKVTLFTTFLVIYLIILFANLRMTVLVRTDPQLHTSMYFFLSHLSFSDLCYSTVIGPRIPVGFLIKNKSIPFYGCALQFLIFCTFADSXCLLLAVMAYDRYIAISNPLLYTVKMSGKVCSLLMAGVYMVXVMDASINAILTFCLCFCGSNETNHFFCDVPPLLLQSFSDTQVNELVTFIIFGFIELITLSGLFVSYCYIILAVIKIHSAEGRFKAFSTCTSHPTALAIFQGTLLFMYFRPSTSYSLDEDKMTSLFYTLVIPMLNPLIYSLQNKDVKEALMKCKNKKQFH
SIO_010081: LOC106503527
subclass of: SO_0000673
so part of: LOC106503527
location: complement(107655..108586)
location: region:107655-108586:-1
so has part: feature:107655-108586:-1:exon

XP_013829671.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107655-108586:-1:exon

LOC108633760
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108633760
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(121914..122861)
location: region:121914-122861:-1
so has part: feature:121914-122861:-1:exon

108633760
type: Gene
SIO_000068: ncbigene

position:121914:-1
position: 121914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122861:-1
position: 122861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121914-122861:-1:exon

LOC108633760
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633760
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC108633760
subclass of: SO_0000673
so part of: LOC108633760
location: complement(121914..122861)
location: region:121914-122861:-1
so has part: feature:121914-122861:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121914-122861:-1:exon

LOC106503523
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(138209..139177)
location: region:138209-139177:-1
so has part: feature:138209-139177:-1:exon

106503523
type: Gene
SIO_000068: ncbigene

position:138209:-1
position: 138209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139177:-1
position: 139177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138209-139177:-1:exon

LOC106503523
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC106503523
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC106503523
subclass of: SO_0000673
so part of: LOC106503523
location: complement(138209..139177)
location: region:138209-139177:-1
so has part: feature:138209-139177:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138209-139177:-1:exon

LOC102183025
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102183025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 203089..204503
location: region:203089-204503:1
so has part: feature:203089-204503:1:exon

102183025
type: Gene
SIO_000068: ncbigene

position:203089:1
position: 203089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204503:1
position: 204503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203089-204503:1:exon

LOC102183025
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102183025
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102183025
subclass of: SO_0000673
so part of: LOC102183025
location: 203089..204503
location: region:203089-204503:1
so has part: feature:203089-204503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203089-204503:1:exon

PARD6G
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: PARD6G
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 222161..298693
location: region:222161-298693:1
so has part: feature:222161-298693:1:exon
subclass of: SO_0000010

102187092
type: Gene
SIO_000068: ncbigene

position:222161:1
position: 222161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298693:1
position: 298693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222161-298693:1:exon

PARD6G
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PARD6G
product: par-6 family cell polarity regulator gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_018039768.1
SIO_010081: PARD6G
subclass of: SO_0000673
so part of: PARD6G
location: join(222161..222479,262621..262843,295844..298693)
location: region:222161-298693:1
so has part: feature:222161-222479:1:exon
so has part: feature:262621-262843:1:exon
so has part: feature:295844-298693:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222161-222479:1:exon

position:222479:1
position: 222479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262621-262843:1:exon

position:262621:1
position: 262621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262843:1
position: 262843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:295844-298693:1:exon

position:295844:1
position: 295844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PARD6G
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PARD6G
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: partitioning defective 6 homolog gamma
translation: MNRSFHKSQTLRFYDCSAVEVKSKFGAEFRRFSLDRQKPGRFEDFYKLVVHTHHIANTEVTIGYADVHGDLLPINNDDNFCKAVSSANPLLRVFIQKREEAEHCSFGAGSLSRRRRPLALREDGPRRRTHLHIGLPHDFRPVSSIIDVDIVPETHRRVRLYRHGCQKPLGFYIRDGTSVRVAPQGLEKVPGVFISRMVPGGLAESTGLLAVDDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQRNNVVRGSRASGSSGRSSDSIASRHSLPAAHVLQNLPPDEMESDEEADVVLEGVLEPRLAPRPPPGSLARVNGAGLAPGVHSPGREGSVQRLLSSLRSDPRHSLALPPGGVEEHGPAVTL
SIO_010081: PARD6G
subclass of: SO_0000673
so part of: PARD6G
location: join(222408..222479,262621..262843,295844..296664)
location: region:222408-296664:1
so has part: feature:222408-222479:1:exon
so has part: feature:262621-262843:1:exon
so has part: feature:295844-296664:1:exon

XP_017895257.1
type: Protein
SIO_000068: ncbiprotein

position:222408:1
position: 222408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296664:1
position: 296664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222408-222479:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262621-262843:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295844-296664:1:exon

ADNP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ADNP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(318117..352282)
location: region:318117-352282:-1
so has part: feature:318117-352282:-1:exon
subclass of: SO_0000010

102183283
type: Gene
SIO_000068: ncbigene

position:318117:-1
position: 318117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352282:-1
position: 352282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318117-352282:-1:exon

ADNP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ADNP2
product: ADNP homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_018039711.1
SIO_010081: ADNP2
subclass of: SO_0000673
so part of: ADNP2
location: complement(join(318117..322809,327915..328004,341356..341476,352179..352282))
location: region:318117-352282:-1
so has part: feature:352179-352282:-1:exon
so has part: feature:341356-341476:-1:exon
so has part: feature:327915-328004:-1:exon
so has part: feature:318117-322809:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352179-352282:-1:exon

position:352179:-1
position: 352179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:341356-341476:-1:exon

position:341356:-1
position: 341356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341476:-1
position: 341476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327915-328004:-1:exon

position:327915:-1
position: 327915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328004:-1
position: 328004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:318117-322809:-1:exon

position:322809:-1
position: 322809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADNP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ADNP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADNP homeobox protein 2
translation: MFQIPVENLDNIRKVRKKVKSILVDIGLDSCKELLKDLKGFDPGEKYFYNTSWGDISLWEPSGKKVRYRTKPYCCSLCKYSTKVLTSFKNHLHRYHEDEIDQELVIPCPNCVFSSQPRVVGRHFRMFHAPARKVQNYTVNISGETKSSRSDVISFTCLKCNFSNTLYYSMKKHVLVAHFHYLINSYFGLRTEEMGEHPGADDTLCAEKLPPSDRYYCKKCNANASSQDALMYHILTSDIHRDLENKLRSVISEHIKKTGLLKQMHIAPKPAAHMAVPPNSSAPGIPASSCFHLSLPQNGQSQTMVQPVQGAAPPAAGAAGAVGSVTHSPPAVAQPHVTLVSSPLPVGQSSLTLPPSTPQPVFLSHGVPLNQAANPPVLPLSQTVGPVNKSVGTSVLPINQTIRPGVLPLSQPVGPISRPVGPGVLSVNRPVGSGVLPVNPSVTPGVLQAVSPGVISVSRTVPSGVLPAGQVTPAGVIPSGQTATSGVLPTGQVVQSGVLPIGQTAPSGALPTGLTVPLRVLPPGQVVPPGLLPPNQTVSSAVLPVNQGINSGVLQLSQPVMSGVLPVGQSVRPGVLQLNQSVNTNILPANQTIRPGASPNTTFLTSGSILRQLIPTGKQVNGIPTYTLAPVSVTLPVPPGSVATVAPPQMPIQLLQSGTAAQMASSMAGMPSPPMVVNATQSMFVQASSSVAEANHVLKQAKQWKTCPVCNELFPSNVYQVHMEVAHKHSESKAADKLEPEKLAACAPFLKWMREKTVRCLSCKCLVSEEELIHHLLMHGLGCLFCPCTFHDIRGLSEHSRTMHLGKKKLPMDYSNKGFQLDIDANGNLLFPHLDFITILPREELGEREVYLAILAGIHSKSLVPVYIKVRPQAEGASGRPGKQVLTCPFCFGTFVTTEAYELHLKERHHITPTVHTILKSPAFKCIHCCGVYTGNMTLAAIAIHLLRCRSAPKDSSPDLQGQPGLLENSELLLVNGEVIHDASFSVKRKLPDGHSGAEDQRDGAERPLIIDADADPAPEKAPSAAPVKRQRSEGRTEGPPISDDALQILALNPKKYEDRSYEDKKQFLRDYFHKRPYPSKKEIELLSSLLWVWKIDVASFFGKRRYICMKAIKNHKPSVLLGFDMSELKNVKHRLNFEHEPQNL
SIO_010081: ADNP2
subclass of: SO_0000673
so part of: ADNP2
location: complement(join(319570..322809,327915..328004,341356..341463))
location: region:319570-341463:-1
so has part: feature:341356-341463:-1:exon
so has part: feature:327915-328004:-1:exon
so has part: feature:319570-322809:-1:exon

XP_017895200.1
type: Protein
SIO_000068: ncbiprotein

position:319570:-1
position: 319570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341463:-1
position: 341463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341356-341463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327915-328004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:319570-322809:-1:exon

RBFA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: RBFA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(365524..379990)
location: region:365524-379990:-1
so has part: feature:365524-379990:-1:exon
subclass of: SO_0000010

102183557
type: Gene
SIO_000068: ncbigene

position:365524:-1
position: 365524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379990:-1
position: 379990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365524-379990:-1:exon

RBFA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RBFA
product: ribosome binding factor A (putative), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_005696939.3
SIO_010081: RBFA
subclass of: SO_0000673
so part of: RBFA
location: complement(join(365524..367491,367735..368042,369155..369228,371759..371843,374366..374478,374956..375132,377078..377120,379743..379990))
location: region:365524-379990:-1
so has part: feature:379743-379990:-1:exon
so has part: feature:377078-377120:-1:exon
so has part: feature:374956-375132:-1:exon
so has part: feature:374366-374478:-1:exon
so has part: feature:371759-371843:-1:exon
so has part: feature:369155-369228:-1:exon
so has part: feature:367735-368042:-1:exon
so has part: feature:365524-367491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379743-379990:-1:exon

position:379743:-1
position: 379743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:377078-377120:-1:exon

position:377078:-1
position: 377078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377120:-1
position: 377120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:374956-375132:-1:exon

position:374956:-1
position: 374956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375132:-1
position: 375132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:374366-374478:-1:exon

position:374366:-1
position: 374366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374478:-1
position: 374478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:371759-371843:-1:exon

position:371759:-1
position: 371759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371843:-1
position: 371843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:369155-369228:-1:exon

position:369155:-1
position: 369155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369228:-1
position: 369228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:367735-368042:-1:exon

position:367735:-1
position: 367735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368042:-1
position: 368042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:365524-367491:-1:exon

position:367491:-1
position: 367491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBFA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RBFA
product: ribosome binding factor A (putative), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_005696938.3
SIO_010081: RBFA
subclass of: SO_0000673
so part of: RBFA
location: complement(join(365524..368042,369155..369228,371759..371843,374366..374478,374956..375132,377078..377120,379743..379988))
location: region:365524-379988:-1
so has part: feature:379743-379988:-1:exon
so has part: feature:377078-377120:-1:exon
so has part: feature:374956-375132:-1:exon
so has part: feature:374366-374478:-1:exon
so has part: feature:371759-371843:-1:exon
so has part: feature:369155-369228:-1:exon
so has part: feature:365524-368042:-1:exon

position:379988:-1
position: 379988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379743-379988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:377078-377120:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:374956-375132:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374366-374478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371759-371843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369155-369228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:365524-368042:-1:exon

RBFA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RBFA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ribosome-binding factor A, mitochondrial
translation: MWAALRGRPGLYLGLLSGARGLHSSPVSCGKNLLKKFASKTKKKFWYEGPSLGSHLTHKSSQLEFLTKSTSRRTRKEDQVRLRALNGLLYKALTDLLCTPEVSQELCDLNVEVCKVSLTSDFSACRVFWRASLSETQNAHTEAVLRRSAAHMRHLLMSQQTLRNVPPIVFVQDKKYAAVMEIDRLLAIADFGPRGEKEDFVQNDFSDPEALDAASPSDTLGPAAHLNLCGIDHEALNKQILEYKRRRDRGHGSMDNLWPEHMAHLTKQMRRRKAKPHVDDDLSPKNYLQGGE
SIO_010081: RBFA
subclass of: SO_0000673
so part of: RBFA
location: complement(join(367781..368042,369155..369228,371759..371843,374366..374478,374956..375132,377078..377120,379743..379867))
location: region:367781-379867:-1
so has part: feature:379743-379867:-1:exon
so has part: feature:377078-377120:-1:exon
so has part: feature:374956-375132:-1:exon
so has part: feature:374366-374478:-1:exon
so has part: feature:371759-371843:-1:exon
so has part: feature:369155-369228:-1:exon
so has part: feature:367781-368042:-1:exon

XP_005696995.1
type: Protein
SIO_000068: ncbiprotein

position:367781:-1
position: 367781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379867:-1
position: 379867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379743-379867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:377078-377120:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:374956-375132:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374366-374478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371759-371843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369155-369228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:367781-368042:-1:exon

RBFA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RBFA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ribosome-binding factor A, mitochondrial
translation: MWAALRGRPGLYLGLLSGARGLHSSPVSCGKNLLKKFASKTKKKFWYEGPSLGSHLTHKSSQLEFLTKSTSRRTRKEDQVRLRALNGLLYKALTDLLCTPEVSQELCDLNVEVCKVSLTSDFSACRVFWRASLSETQNAHTEAVLRRSAAHMRHLLMSQQTLRNVPPIVFVQDKKYAAVMEIDRLLAIADFGPRGEKEDFVQNDFSDPEALDAASPSDTLGPAAHLNLCGIDHEALNKQILEYKRRRDRGHGSMDNLWPEHMAHLTKQMRRRKAKPHVDDDLSPKNYLQGGE
SIO_010081: RBFA
subclass of: SO_0000673
so part of: RBFA
location: complement(join(367781..368042,369155..369228,371759..371843,374366..374478,374956..375132,377078..377120,379743..379867))
location: region:367781-379867:-1
so has part: feature:379743-379867:-1:exon
so has part: feature:377078-377120:-1:exon
so has part: feature:374956-375132:-1:exon
so has part: feature:374366-374478:-1:exon
so has part: feature:371759-371843:-1:exon
so has part: feature:369155-369228:-1:exon
so has part: feature:367781-368042:-1:exon

XP_005696996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379743-379867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:377078-377120:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:374956-375132:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374366-374478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371759-371843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369155-369228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:367781-368042:-1:exon

LOC102184018
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102184018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(382323..409447)
location: region:382323-409447:-1
so has part: feature:382323-409447:-1:exon
subclass of: SO_0000010

102184018
type: Gene
SIO_000068: ncbigene

position:382323:-1
position: 382323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409447:-1
position: 409447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382323-409447:-1:exon

LOC102184018
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102184018
product: probable 2-ketogluconate reductase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005696940.3
SIO_010081: LOC102184018
subclass of: SO_0000673
so part of: LOC102184018
location: complement(join(382323..382541,387110..387206,388555..388733,390163..390334,391221..391605,395177..395223,395423..395511))
location: region:382323-395511:-1
so has part: feature:395423-395511:-1:exon
so has part: feature:395177-395223:-1:exon
so has part: feature:391221-391605:-1:exon
so has part: feature:390163-390334:-1:exon
so has part: feature:388555-388733:-1:exon
so has part: feature:387110-387206:-1:exon
so has part: feature:382323-382541:-1:exon

position:395511:-1
position: 395511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395423-395511:-1:exon

position:395423:-1
position: 395423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:395177-395223:-1:exon

position:395177:-1
position: 395177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395223:-1
position: 395223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:391221-391605:-1:exon

position:391221:-1
position: 391221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391605:-1
position: 391605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:390163-390334:-1:exon

position:390163:-1
position: 390163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390334:-1
position: 390334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:388555-388733:-1:exon

position:388555:-1
position: 388555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388733:-1
position: 388733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:387110-387206:-1:exon

position:387110:-1
position: 387110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387206:-1
position: 387206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:382323-382541:-1:exon

position:382541:-1
position: 382541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102184018
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102184018
product: probable 2-ketogluconate reductase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_013974214.2
SIO_010081: LOC102184018
subclass of: SO_0000673
so part of: LOC102184018
location: complement(join(382330..382541,387110..387206,388555..388733,390163..390334,391221..391605,409143..409447))
location: region:382330-409447:-1
so has part: feature:409143-409447:-1:exon
so has part: feature:391221-391605:-1:exon
so has part: feature:390163-390334:-1:exon
so has part: feature:388555-388733:-1:exon
so has part: feature:387110-387206:-1:exon
so has part: feature:382330-382541:-1:exon

position:382330:-1
position: 382330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409143-409447:-1:exon

position:409143:-1
position: 409143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:391221-391605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:390163-390334:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388555-388733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387110-387206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:382330-382541:-1:exon

LOC102184018
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102184018
product: probable 2-ketogluconate reductase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_013974213.2
SIO_010081: LOC102184018
subclass of: SO_0000673
so part of: LOC102184018
location: complement(join(382330..382541,387110..387206,388555..388733,390163..390334,391221..391605,395177..395223,409143..409446))
location: region:382330-409446:-1
so has part: feature:409143-409446:-1:exon
so has part: feature:395177-395223:-1:exon
so has part: feature:391221-391605:-1:exon
so has part: feature:390163-390334:-1:exon
so has part: feature:388555-388733:-1:exon
so has part: feature:387110-387206:-1:exon
so has part: feature:382330-382541:-1:exon

position:409446:-1
position: 409446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409143-409446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:395177-395223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391221-391605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:390163-390334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388555-388733:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387110-387206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:382330-382541:-1:exon

LOC102184018
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102184018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable 2-ketogluconate reductase
translation: MGNQDLPGVLVSDLEGPHGICEDHVEDLKRHFNLITMQDFLESKAQLGPKIQAVYIWGGRPAVSQELLHSLPSLKIVASAGAGLDHLDLGLVASFGVKVANTPHAVSSPTADLGMALLLAAARRVVEGHQLAVSPHTENFPTDYMGQQVTGATLGIIGMGNIGYKIAQRARAFEMKIVYHNRKRRKLEEEEAVGATYCERLDDLLQWSDFVMLAVSLTPHTQGLIGKRELRLMKPTAILINIGRGLLVDQDALVEALQTGLIKAAALDVTYPEPLPRDHPLLKLKNVTLTPHIGSATHQARRQIMENLVESILASLSGLPIPNEVLLK
SIO_010081: LOC102184018
subclass of: SO_0000673
so part of: LOC102184018
location: complement(join(382385..382541,387110..387206,388555..388733,390163..390334,391221..391602))
location: region:382385-391602:-1
so has part: feature:391221-391602:-1:exon
so has part: feature:390163-390334:-1:exon
so has part: feature:388555-388733:-1:exon
so has part: feature:387110-387206:-1:exon
so has part: feature:382385-382541:-1:exon

XP_005696997.2
type: Protein
SIO_000068: ncbiprotein

position:382385:-1
position: 382385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391602:-1
position: 391602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391221-391602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390163-390334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388555-388733:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387110-387206:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:382385-382541:-1:exon

LOC102184018
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102184018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable 2-ketogluconate reductase
translation: MGNQDLPGVLVSDLEGPHGICEDHVEDLKRHFNLITMQDFLESKAQLGPKIQAVYIWGGRPAVSQELLHSLPSLKIVASAGAGLDHLDLGLVASFGVKVANTPHAVSSPTADLGMALLLAAARRVVEGHQLAVSPHTENFPTDYMGQQVTGATLGIIGMGNIGYKIAQRARAFEMKIVYHNRKRRKLEEEEAVGATYCERLDDLLQWSDFVMLAVSLTPHTQGLIGKRELRLMKPTAILINIGRGLLVDQDALVEALQTGLIKAAALDVTYPEPLPRDHPLLKLKNVTLTPHIGSATHQARRQIMENLVESILASLSGLPIPNEVLLK
SIO_010081: LOC102184018
subclass of: SO_0000673
so part of: LOC102184018
location: complement(join(382385..382541,387110..387206,388555..388733,390163..390334,391221..391602))
location: region:382385-391602:-1
so has part: feature:391221-391602:-1:exon
so has part: feature:390163-390334:-1:exon
so has part: feature:388555-388733:-1:exon
so has part: feature:387110-387206:-1:exon
so has part: feature:382385-382541:-1:exon

XP_013829667.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391221-391602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390163-390334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388555-388733:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387110-387206:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:382385-382541:-1:exon

LOC102184018
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102184018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable 2-ketogluconate reductase
translation: MGNQDLPGVLVSDLEGPHGICEDHVEDLKRHFNLITMQDFLESKAQLGPKIQAVYIWGGRPAVSQELLHSLPSLKIVASAGAGLDHLDLGLVASFGVKVANTPHAVSSPTADLGMALLLAAARRVVEGHQLAVSPHTENFPTDYMGQQVTGATLGIIGMGNIGYKIAQRARAFEMKIVYHNRKRRKLEEEEAVGATYCERLDDLLQWSDFVMLAVSLTPHTQGLIGKRELRLMKPTAILINIGRGLLVDQDALVEALQTGLIKAAALDVTYPEPLPRDHPLLKLKNVTLTPHIGSATHQARRQIMENLVESILASLSGLPIPNEVLLK
SIO_010081: LOC102184018
subclass of: SO_0000673
so part of: LOC102184018
location: complement(join(382385..382541,387110..387206,388555..388733,390163..390334,391221..391602))
location: region:382385-391602:-1
so has part: feature:391221-391602:-1:exon
so has part: feature:390163-390334:-1:exon
so has part: feature:388555-388733:-1:exon
so has part: feature:387110-387206:-1:exon
so has part: feature:382385-382541:-1:exon

XP_013829668.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391221-391602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390163-390334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388555-388733:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387110-387206:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:382385-382541:-1:exon

TXNL4A
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 409476..420323
location: region:409476-420323:1
so has part: feature:409476-420323:1:exon
subclass of: SO_0000010

100861400
type: Gene
SIO_000068: ncbigene

position:409476:1
position: 409476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420323:1
position: 420323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409476-420323:1:exon

TXNL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 29 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_018039393.1
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(409476..409583,409960..410127,415984..416087,419906..420322)
location: region:409476-420322:1
so has part: feature:409476-409583:1:exon
so has part: feature:409960-410127:1:exon
so has part: feature:415984-416087:1:exon
so has part: feature:419906-420322:1:exon

position:420322:1
position: 420322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409476-409583:1:exon

position:409583:1
position: 409583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:409960-410127:1:exon

position:409960:1
position: 409960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410127:1
position: 410127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:415984-416087:1:exon

position:415984:1
position: 415984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416087:1
position: 416087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:419906-420322:1:exon

position:419906:1
position: 419906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TXNL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 36 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_018039392.1
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(409487..409612,409960..410127,415984..416087,419906..420323)
location: region:409487-420323:1
so has part: feature:409487-409612:1:exon
so has part: feature:409960-410127:1:exon
so has part: feature:415984-416087:1:exon
so has part: feature:419906-420323:1:exon

position:409487:1
position: 409487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409487-409612:1:exon

position:409612:1
position: 409612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:409960-410127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:415984-416087:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419906-420323:1:exon

TXNL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_018039394.1
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(409501..409612,409960..410127,412193..412262,415984..416087,419906..420313)
location: region:409501-420313:1
so has part: feature:409501-409612:1:exon
so has part: feature:409960-410127:1:exon
so has part: feature:412193-412262:1:exon
so has part: feature:415984-416087:1:exon
so has part: feature:419906-420313:1:exon

position:409501:1
position: 409501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420313:1
position: 420313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409501-409612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:409960-410127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412193-412262:1:exon

position:412193:1
position: 412193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412262:1
position: 412262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:415984-416087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419906-420313:1:exon

TXNL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X1
translation: MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(409975..410127,415984..416087,419906..420077)
location: region:409975-420077:1
so has part: feature:409975-410127:1:exon
so has part: feature:415984-416087:1:exon
so has part: feature:419906-420077:1:exon

XP_017894881.1
type: Protein
SIO_000068: ncbiprotein

position:409975:1
position: 409975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420077:1
position: 420077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409975-410127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415984-416087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419906-420077:1:exon

TXNL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X1
translation: MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(409975..410127,415984..416087,419906..420077)
location: region:409975-420077:1
so has part: feature:409975-410127:1:exon
so has part: feature:415984-416087:1:exon
so has part: feature:419906-420077:1:exon

XP_017894882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409975-410127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415984-416087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419906-420077:1:exon

TXNL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_018039395.1
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(410013..410127,411834..411894,412193..412262,415984..416087,419906..420313)
location: region:410013-420313:1
so has part: feature:410013-410127:1:exon
so has part: feature:411834-411894:1:exon
so has part: feature:412193-412262:1:exon
so has part: feature:415984-416087:1:exon
so has part: feature:419906-420313:1:exon

position:410013:1
position: 410013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410013-410127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:411834-411894:1:exon

position:411834:1
position: 411834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411894:1
position: 411894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:412193-412262:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:415984-416087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419906-420313:1:exon

TXNL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X2
translation: MYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(416044..416087,419906..420077)
location: region:416044-420077:1
so has part: feature:416044-416087:1:exon
so has part: feature:419906-420077:1:exon

XP_017894883.1
type: Protein
SIO_000068: ncbiprotein

position:416044:1
position: 416044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416044-416087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419906-420077:1:exon

TXNL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X2
translation: MYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(416044..416087,419906..420077)
location: region:416044-420077:1
so has part: feature:416044-416087:1:exon
so has part: feature:419906-420077:1:exon

XP_017894884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416044-416087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419906-420077:1:exon

HSBP1L1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: HSBP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(420439..433615)
location: region:420439-433615:-1
so has part: feature:420439-433615:-1:exon
subclass of: SO_0000010

102187361
type: Gene
SIO_000068: ncbigene

position:420439:-1
position: 420439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433615:-1
position: 433615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420439-433615:-1:exon

HSBP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: HSBP1L1
product: heat shock factor binding protein 1 like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_018039396.1
SIO_010081: HSBP1L1
subclass of: SO_0000673
so part of: HSBP1L1
location: complement(join(420439..420785,430188..430281,431232..431298,433152..433615))
location: region:420439-433615:-1
so has part: feature:433152-433615:-1:exon
so has part: feature:431232-431298:-1:exon
so has part: feature:430188-430281:-1:exon
so has part: feature:420439-420785:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433152-433615:-1:exon

position:433152:-1
position: 433152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:431232-431298:-1:exon

position:431232:-1
position: 431232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431298:-1
position: 431298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:430188-430281:-1:exon

position:430188:-1
position: 430188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430281:-1
position: 430281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:420439-420785:-1:exon

position:420785:-1
position: 420785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSBP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: HSBP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor-binding protein 1-like protein 1 isoform X1
translation: MDARGPEASGGRALRDVAENLFQELQEHFQALTATLNLRMEEMGGRIEDLQKNVNDLMAQAGIDSPAQKHRVFLNSSLWFY
SIO_010081: HSBP1L1
subclass of: SO_0000673
so part of: HSBP1L1
location: complement(join(420752..420785,430188..430281,431232..431298,433152..433202))
location: region:420752-433202:-1
so has part: feature:433152-433202:-1:exon
so has part: feature:431232-431298:-1:exon
so has part: feature:430188-430281:-1:exon
so has part: feature:420752-420785:-1:exon

XP_017894885.1
type: Protein
SIO_000068: ncbiprotein

position:420752:-1
position: 420752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433202:-1
position: 433202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433152-433202:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431232-431298:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430188-430281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420752-420785:-1:exon

HSBP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: HSBP1L1
product: heat shock factor binding protein 1 like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_018039397.1
SIO_010081: HSBP1L1
subclass of: SO_0000673
so part of: HSBP1L1
location: complement(join(424443..427895,430188..430281,431232..431298,433152..433602))
location: region:424443-433602:-1
so has part: feature:433152-433602:-1:exon
so has part: feature:431232-431298:-1:exon
so has part: feature:430188-430281:-1:exon
so has part: feature:424443-427895:-1:exon

position:424443:-1
position: 424443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433602:-1
position: 433602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433152-433602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431232-431298:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430188-430281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424443-427895:-1:exon

position:427895:-1
position: 427895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSBP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: HSBP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor-binding protein 1-like protein 1 isoform X2
translation: MDARGPEASGGRALRDVAENLFQELQEHFQALTATLNLRMEEMGGRIEDLQKNVNDLMAQAGIDSPAQKHRLEDRTVI
SIO_010081: HSBP1L1
subclass of: SO_0000673
so part of: HSBP1L1
location: complement(join(427871..427895,430188..430281,431232..431298,433152..433202))
location: region:427871-433202:-1
so has part: feature:433152-433202:-1:exon
so has part: feature:431232-431298:-1:exon
so has part: feature:430188-430281:-1:exon
so has part: feature:427871-427895:-1:exon

XP_017894886.1
type: Protein
SIO_000068: ncbiprotein

position:427871:-1
position: 427871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433152-433202:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431232-431298:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430188-430281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427871-427895:-1:exon

LOC108633785
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108633785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(433652..440135)
location: region:433652-440135:-1
so has part: feature:433652-440135:-1:exon
subclass of: SO_0000011

108633785
type: Gene
SIO_000068: ncbigene

position:433652:-1
position: 433652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440135:-1
position: 440135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433652-440135:-1:exon

LOC108633785
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108633785
product: uncharacterized LOC108633785
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001917149.1
SIO_010081: LOC108633785
subclass of: SO_0000673
so part of: LOC108633785
location: complement(join(433652..433805,439028..439150,440094..440135))
location: region:433652-440135:-1
so has part: feature:440094-440135:-1:exon
so has part: feature:439028-439150:-1:exon
so has part: feature:433652-433805:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440094-440135:-1:exon

position:440094:-1
position: 440094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:439028-439150:-1:exon

position:439028:-1
position: 439028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439150:-1
position: 439150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:433652-433805:-1:exon

position:433805:-1
position: 433805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PQLC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: PQLC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 440212..481779
location: region:440212-481779:1
so has part: feature:440212-481779:1:exon
subclass of: SO_0000010

102187638
type: Gene
SIO_000068: ncbigene

position:440212:1
position: 440212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481779:1
position: 481779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440212-481779:1:exon

PQLC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PQLC1
product: PQ loop repeat containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_018039390.1
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(440212..440445,445047..445180,452189..452242,467182..467398,480294..481779)
location: region:440212-481779:1
so has part: feature:440212-440445:1:exon
so has part: feature:445047-445180:1:exon
so has part: feature:452189-452242:1:exon
so has part: feature:467182-467398:1:exon
so has part: feature:480294-481779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440212-440445:1:exon

position:440445:1
position: 440445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445047-445180:1:exon

position:445047:1
position: 445047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445180:1
position: 445180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:452189-452242:1:exon

position:452189:1
position: 452189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452242:1
position: 452242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:467182-467398:1:exon

position:467182:1
position: 467182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467398:1
position: 467398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:480294-481779:1:exon

position:480294:1
position: 480294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PQLC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PQLC1
product: PQ loop repeat containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_018039391.1
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(440212..440445,445047..445180,467182..467398,480294..481779)
location: region:440212-481779:1
so has part: feature:440212-440445:1:exon
so has part: feature:445047-445180:1:exon
so has part: feature:467182-467398:1:exon
so has part: feature:480294-481779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440212-440445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445047-445180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467182-467398:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480294-481779:1:exon

PQLC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PQLC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PQ-loop repeat-containing protein 1 isoform X1
translation: MEAEGLGWLLVPLHQLVSWGAAGAMVFGGVVPYIPQYRDIRRTQNAEGFSTYVCLVLLVANILRILFWFGRRFESPLLWQSVVMILTMLLMLKLCTEVRVANELNLKRRVFSAADNKDGEVRVPPGQSFLDFDPHHFWHWSSFADYVQCVLAFTGVAGYITYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNHRHQSTEGMSIKMVLMWTSGDTFKTAYFLLNGAPLQFSVCGLLQVLVDLAILGQAYVFTRYPLKPAPHAAHPASAKAL
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(440243..440445,445047..445180,452189..452242,467182..467398,480294..480501)
location: region:440243-480501:1
so has part: feature:440243-440445:1:exon
so has part: feature:445047-445180:1:exon
so has part: feature:452189-452242:1:exon
so has part: feature:467182-467398:1:exon
so has part: feature:480294-480501:1:exon

XP_017894879.1
type: Protein
SIO_000068: ncbiprotein

position:440243:1
position: 440243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480501:1
position: 480501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440243-440445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445047-445180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:452189-452242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467182-467398:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480294-480501:1:exon

PQLC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PQLC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PQ-loop repeat-containing protein 1 isoform X2
translation: MEAEGLGWLLVPLHQLVSWGAAGAMVFGGVVPYIPQYRDIRRTQNAEGFSTYVCLVLLVANILRILFWFGRRFESPLLWQSVVMILTMLLMLKLCTEVRVANELNLKRRVFSDFDPHHFWHWSSFADYVQCVLAFTGVAGYITYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNHRHQSTEGMSIKMVLMWTSGDTFKTAYFLLNGAPLQFSVCGLLQVLVDLAILGQAYVFTRYPLKPAPHAAHPASAKAL
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(440243..440445,445047..445180,467182..467398,480294..480501)
location: region:440243-480501:1
so has part: feature:440243-440445:1:exon
so has part: feature:445047-445180:1:exon
so has part: feature:467182-467398:1:exon
so has part: feature:480294-480501:1:exon

XP_017894880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440243-440445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445047-445180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467182-467398:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480294-480501:1:exon

KCNG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: KCNG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(483402..509735)
location: region:483402-509735:-1
so has part: feature:483402-509735:-1:exon
subclass of: SO_0000010

106503526
type: Gene
SIO_000068: ncbigene

position:483402:-1
position: 483402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509735:-1
position: 509735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483402-509735:-1:exon

KCNG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: KCNG2
product: potassium voltage-gated channel modifier subfamily G member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018039398.1
SIO_010081: KCNG2
subclass of: SO_0000673
so part of: KCNG2
location: complement(join(483402..485474,509101..509735))
location: region:483402-509735:-1
so has part: feature:509101-509735:-1:exon
so has part: feature:483402-485474:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509101-509735:-1:exon

position:509101:-1
position: 509101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:483402-485474:-1:exon

position:485474:-1
position: 485474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: KCNG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily G member 2
translation: MALLPGPAERRGGGGGARARHVIINVGGCRVRLAWAALARCPLARLERLRACRGHDELLRVCDDYDVSRDEFFFDRSPCAFRAIVALLRAGKLRLLRGPCALAFRDELAYWGIDEARLERCCLRRLRRREEEAAEARAGPVERGAPGSPACAPGPGGRLASGRRRLRDVVDDPRSGPAGKLFACVSVAFVAVTAVGLCLSTMPDIRAEEERGECSPKCRSLFVLETVCVAWFSFEFLLRSLQAESKCAFLRTPLNIIDILAILPFYVSLLVGLAARPGVGGNKLLERAGLVLRLLRALRVLYVMRLARHSLGLRSLGLTVRRCAREFGLLLLFLCVAMALFAPLVHLAERELGARRDFSSVPASYWWAVISMTTVGYGDMVPRSLPGQVVALSSILSGILLMAFPVTSIFHTFSRSYSELKEQQQRAASPEPALREDSTRSASASASATATEDDGSQSPDGNGLAGASAEGPWARAGPT
SIO_010081: KCNG2
subclass of: SO_0000673
so part of: KCNG2
location: complement(join(484668..485474,509101..509733))
location: region:484668-509733:-1
so has part: feature:509101-509733:-1:exon
so has part: feature:484668-485474:-1:exon

XP_017894887.1
type: Protein
SIO_000068: ncbiprotein

position:484668:-1
position: 484668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509733:-1
position: 509733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509101-509733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484668-485474:-1:exon

CTDP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CTDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(560414..587298)
location: region:560414-587298:-1
so has part: feature:560414-587298:-1:exon
subclass of: SO_0000010

102187908
type: Gene
SIO_000068: ncbigene

position:560414:-1
position: 560414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587298:-1
position: 587298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560414-587298:-1:exon

CTDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CTDP1
product: CTD phosphatase subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018039675.1
SIO_010081: CTDP1
subclass of: SO_0000673
so part of: CTDP1
location: complement(join(560414..561216,565567..565715,566889..567051,573559..573700,574018..574995,575751..575917,577442..577532,578424..578574,579983..580111,581311..581404,581896..581979,586834..587298))
location: region:560414-587298:-1
so has part: feature:586834-587298:-1:exon
so has part: feature:581896-581979:-1:exon
so has part: feature:581311-581404:-1:exon
so has part: feature:579983-580111:-1:exon
so has part: feature:578424-578574:-1:exon
so has part: feature:577442-577532:-1:exon
so has part: feature:575751-575917:-1:exon
so has part: feature:574018-574995:-1:exon
so has part: feature:573559-573700:-1:exon
so has part: feature:566889-567051:-1:exon
so has part: feature:565567-565715:-1:exon
so has part: feature:560414-561216:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586834-587298:-1:exon

position:586834:-1
position: 586834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:581896-581979:-1:exon

position:581896:-1
position: 581896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581979:-1
position: 581979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581311-581404:-1:exon

position:581311:-1
position: 581311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581404:-1
position: 581404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:579983-580111:-1:exon

position:579983:-1
position: 579983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580111:-1
position: 580111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:578424-578574:-1:exon

position:578424:-1
position: 578424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578574:-1
position: 578574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:577442-577532:-1:exon

position:577442:-1
position: 577442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577532:-1
position: 577532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:575751-575917:-1:exon

position:575751:-1
position: 575751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575917:-1
position: 575917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:574018-574995:-1:exon

position:574018:-1
position: 574018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574995:-1
position: 574995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:573559-573700:-1:exon

position:573559:-1
position: 573559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573700:-1
position: 573700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:566889-567051:-1:exon

position:566889:-1
position: 566889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567051:-1
position: 567051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:565567-565715:-1:exon

position:565567:-1
position: 565567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565715:-1
position: 565715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:560414-561216:-1:exon

position:561216:-1
position: 561216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CTDP1
product: CTD phosphatase subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_018039674.1
SIO_010081: CTDP1
subclass of: SO_0000673
so part of: CTDP1
location: complement(join(560414..561216,565567..565715,566889..567051,572787..572987,573559..573700,574018..574995,575751..575917,577442..577532,578424..578574,579983..580111,581311..581404,581896..581979,586834..587298))
location: region:560414-587298:-1
so has part: feature:586834-587298:-1:exon
so has part: feature:581896-581979:-1:exon
so has part: feature:581311-581404:-1:exon
so has part: feature:579983-580111:-1:exon
so has part: feature:578424-578574:-1:exon
so has part: feature:577442-577532:-1:exon
so has part: feature:575751-575917:-1:exon
so has part: feature:574018-574995:-1:exon
so has part: feature:573559-573700:-1:exon
so has part: feature:572787-572987:-1:exon
so has part: feature:566889-567051:-1:exon
so has part: feature:565567-565715:-1:exon
so has part: feature:560414-561216:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586834-587298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581896-581979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581311-581404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579983-580111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578424-578574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577442-577532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575751-575917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574018-574995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573559-573700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:572787-572987:-1:exon

position:572787:-1
position: 572787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572987:-1
position: 572987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:566889-567051:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:565567-565715:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:560414-561216:-1:exon

CTDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CTDP1
product: CTD phosphatase subunit 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_018039676.1
SIO_010081: CTDP1
subclass of: SO_0000673
so part of: CTDP1
location: complement(join(560414..561216,565567..565715,566889..567051,572787..572987,573559..573700,574018..574995,575751..575917,577442..577532,578424..578574,579983..580111,581311..581404,581896..581979,584640..584816))
location: region:560414-584816:-1
so has part: feature:584640-584816:-1:exon
so has part: feature:581896-581979:-1:exon
so has part: feature:581311-581404:-1:exon
so has part: feature:579983-580111:-1:exon
so has part: feature:578424-578574:-1:exon
so has part: feature:577442-577532:-1:exon
so has part: feature:575751-575917:-1:exon
so has part: feature:574018-574995:-1:exon
so has part: feature:573559-573700:-1:exon
so has part: feature:572787-572987:-1:exon
so has part: feature:566889-567051:-1:exon
so has part: feature:565567-565715:-1:exon
so has part: feature:560414-561216:-1:exon

position:584816:-1
position: 584816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584640-584816:-1:exon

position:584640:-1
position: 584640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:581896-581979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581311-581404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579983-580111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578424-578574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577442-577532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575751-575917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574018-574995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573559-573700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:572787-572987:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:566889-567051:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:565567-565715:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:560414-561216:-1:exon

CTDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CTDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II subunit A C-terminal domain phosphatase isoform X2
translation: MEAPPGGRLPAEGSQPPAVAEVRCPGPGPLRLLEWRVAAGAAVRIGSVLAVCEAAASTQPSGPAPVRTGSGGCVRAERRLRSERAGVVRELCAQPGQVVAPGAVLVRLEGCSHPVVMKGLCAECGQDLTQLQSKNGRQQVPLSTATVSMVHSVPELMVSSEQAEKLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKVARLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYFQGIGDIHAPPAPREPPARKRGADAAEQPLSIRDPEEGRQASAVESNGLGRPARELNGGPGPRGCWPCQEEERGARSTARTPSAEGRGTSAGSQPRGKTPPEKRPVRGPAGPDPDPDVPSDSGSSSESEGQPSPAPSDGESGERRTRRKPQASREAGKATPQGSPPGLAGERLAGANHCGEPGPGVPADAQEDGERDGLCVLGGGCADRKEAETESQNSEQSGITVGESLDQSMEEEEEEDADDDDHLVHLEEILARVHSDYYAKYDRFLSGESPEAPDIRKIVPELRSKVLADVAIIFSGLHPTNFPVERTREHYHARALGARILTQLVLDPDDPARPTHLIAARAGTEKVRQAQECGQLHVVNPDWLWSCLERWDRVEEQLFPLRDDQGRAQRAVQPRPQQVFGDDLPDSQDGEQPGPSRRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDDSDSEKKPREEEEPPEEELGHGPPEALEAPRGRRLERGLRGHKRKLNEEDAASESSGASSCEDEEGGSSEADEMAAALEAELGDLM
SIO_010081: CTDP1
subclass of: SO_0000673
so part of: CTDP1
location: complement(join(561075..561216,565567..565715,566889..567051,573559..573700,574018..574995,575751..575917,577442..577532,578424..578574,579983..580111,581311..581404,581896..581979,586834..587138))
location: region:561075-587138:-1
so has part: feature:586834-587138:-1:exon
so has part: feature:581896-581979:-1:exon
so has part: feature:581311-581404:-1:exon
so has part: feature:579983-580111:-1:exon
so has part: feature:578424-578574:-1:exon
so has part: feature:577442-577532:-1:exon
so has part: feature:575751-575917:-1:exon
so has part: feature:574018-574995:-1:exon
so has part: feature:573559-573700:-1:exon
so has part: feature:566889-567051:-1:exon
so has part: feature:565567-565715:-1:exon
so has part: feature:561075-561216:-1:exon

XP_017895164.1
type: Protein
SIO_000068: ncbiprotein

position:561075:-1
position: 561075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587138:-1
position: 587138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586834-587138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581896-581979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581311-581404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579983-580111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578424-578574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577442-577532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575751-575917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574018-574995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573559-573700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:566889-567051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:565567-565715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:561075-561216:-1:exon

CTDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CTDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
translation: MEAPPGGRLPAEGSQPPAVAEVRCPGPGPLRLLEWRVAAGAAVRIGSVLAVCEAAASTQPSGPAPVRTGSGGCVRAERRLRSERAGVVRELCAQPGQVVAPGAVLVRLEGCSHPVVMKGLCAECGQDLTQLQSKNGRQQVPLSTATVSMVHSVPELMVSSEQAEKLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKVARLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYFQGIGDIHAPPAPREPPARKRGADAAEQPLSIRDPEEGRQASAVESNGLGRPARELNGGPGPRGCWPCQEEERGARSTARTPSAEGRGTSAGSQPRGKTPPEKRPVRGPAGPDPDPDVPSDSGSSSESEGQPSPAPSDGESGERRTRRKPQASREAGKATPQGSPPGLAGERLAGANHCGEPGPGVPADAQEDGERDGLCVLGGGCADRKEAETESQNSEQSGITVGESLDQSMEEEEEEDADDDDHLVHLEEILARVHSDYYAKYDRFLSGESPEAPDIRKIVPELRSKVLADVAIIFSGLHPTNFPVERTREHYHARALGARILTQLVLDPDDPARPTHLIAARAGTEKVRQAQECGQLHVVNPDWLWSCLERWDRVEEQLFPLRDDQGRAQREDGPASFPDRQSLLPAALFHPTPVHPKAPPGPEVRIYDASTGRLIRTATSGPGPPGALPHAGLSSFRAVQPRPQQVFGDDLPDSQDGEQPGPSRRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDDSDSEKKPREEEEPPEEELGHGPPEALEAPRGRRLERGLRGHKRKLNEEDAASESSGASSCEDEEGGSSEADEMAAALEAELGDLM
SIO_010081: CTDP1
subclass of: SO_0000673
so part of: CTDP1
location: complement(join(561075..561216,565567..565715,566889..567051,572787..572987,573559..573700,574018..574995,575751..575917,577442..577532,578424..578574,579983..580111,581311..581404,581896..581979,586834..587138))
location: region:561075-587138:-1
so has part: feature:586834-587138:-1:exon
so has part: feature:581896-581979:-1:exon
so has part: feature:581311-581404:-1:exon
so has part: feature:579983-580111:-1:exon
so has part: feature:578424-578574:-1:exon
so has part: feature:577442-577532:-1:exon
so has part: feature:575751-575917:-1:exon
so has part: feature:574018-574995:-1:exon
so has part: feature:573559-573700:-1:exon
so has part: feature:572787-572987:-1:exon
so has part: feature:566889-567051:-1:exon
so has part: feature:565567-565715:-1:exon
so has part: feature:561075-561216:-1:exon

XP_017895163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586834-587138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581896-581979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581311-581404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579983-580111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578424-578574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577442-577532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575751-575917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574018-574995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573559-573700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:572787-572987:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:566889-567051:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:565567-565715:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:561075-561216:-1:exon

CTDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CTDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II subunit A C-terminal domain phosphatase isoform X3
translation: MDKDRHRRRLCRAVLVRLEGCSHPVVMKGLCAECGQDLTQLQSKNGRQQVPLSTATVSMVHSVPELMVSSEQAEKLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKVARLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYFQGIGDIHAPPAPREPPARKRGADAAEQPLSIRDPEEGRQASAVESNGLGRPARELNGGPGPRGCWPCQEEERGARSTARTPSAEGRGTSAGSQPRGKTPPEKRPVRGPAGPDPDPDVPSDSGSSSESEGQPSPAPSDGESGERRTRRKPQASREAGKATPQGSPPGLAGERLAGANHCGEPGPGVPADAQEDGERDGLCVLGGGCADRKEAETESQNSEQSGITVGESLDQSMEEEEEEDADDDDHLVHLEEILARVHSDYYAKYDRFLSGESPEAPDIRKIVPELRSKVLADVAIIFSGLHPTNFPVERTREHYHARALGARILTQLVLDPDDPARPTHLIAARAGTEKVRQAQECGQLHVVNPDWLWSCLERWDRVEEQLFPLRDDQGRAQREDGPASFPDRQSLLPAALFHPTPVHPKAPPGPEVRIYDASTGRLIRTATSGPGPPGALPHAGLSSFRAVQPRPQQVFGDDLPDSQDGEQPGPSRRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDDSDSEKKPREEEEPPEEELGHGPPEALEAPRGRRLERGLRGHKRKLNEEDAASESSGASSCEDEEGGSSEADEMAAALEAELGDLM
SIO_010081: CTDP1
subclass of: SO_0000673
so part of: CTDP1
location: complement(join(561075..561216,565567..565715,566889..567051,572787..572987,573559..573700,574018..574995,575751..575917,577442..577532,578424..578574,579983..580111,581311..581404,581896..581979,584640..584674))
location: region:561075-584674:-1
so has part: feature:584640-584674:-1:exon
so has part: feature:581896-581979:-1:exon
so has part: feature:581311-581404:-1:exon
so has part: feature:579983-580111:-1:exon
so has part: feature:578424-578574:-1:exon
so has part: feature:577442-577532:-1:exon
so has part: feature:575751-575917:-1:exon
so has part: feature:574018-574995:-1:exon
so has part: feature:573559-573700:-1:exon
so has part: feature:572787-572987:-1:exon
so has part: feature:566889-567051:-1:exon
so has part: feature:565567-565715:-1:exon
so has part: feature:561075-561216:-1:exon

XP_017895165.1
type: Protein
SIO_000068: ncbiprotein

position:584674:-1
position: 584674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584640-584674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581896-581979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581311-581404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579983-580111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578424-578574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577442-577532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575751-575917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574018-574995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573559-573700:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:572787-572987:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:566889-567051:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:565567-565715:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:561075-561216:-1:exon

NFATC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: NFATC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(654004..742159)
location: region:654004-742159:-1
so has part: feature:654004-742159:-1:exon
subclass of: SO_0000010

102188180
type: Gene
SIO_000068: ncbigene

position:654004:-1
position: 654004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742159:-1
position: 742159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654004-742159:-1:exon

NFATC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NFATC1
product: nuclear factor of activated T-cells 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_018039660.1
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(654004..655834,679670..680335,691100..691232,697364..697419,703647..703787,704737..704909,706816..707018,717347..717506,727824..728895,741689..742158))
location: region:654004-742158:-1
so has part: feature:741689-742158:-1:exon
so has part: feature:727824-728895:-1:exon
so has part: feature:717347-717506:-1:exon
so has part: feature:706816-707018:-1:exon
so has part: feature:704737-704909:-1:exon
so has part: feature:703647-703787:-1:exon
so has part: feature:697364-697419:-1:exon
so has part: feature:691100-691232:-1:exon
so has part: feature:679670-680335:-1:exon
so has part: feature:654004-655834:-1:exon

position:742158:-1
position: 742158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741689-742158:-1:exon

position:741689:-1
position: 741689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:727824-728895:-1:exon

position:727824:-1
position: 727824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728895:-1
position: 728895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:717347-717506:-1:exon

position:717347:-1
position: 717347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717506:-1
position: 717506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:706816-707018:-1:exon

position:706816:-1
position: 706816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707018:-1
position: 707018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:704737-704909:-1:exon

position:704737:-1
position: 704737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704909:-1
position: 704909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:703647-703787:-1:exon

position:703647:-1
position: 703647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703787:-1
position: 703787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:697364-697419:-1:exon

position:697364:-1
position: 697364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697419:-1
position: 697419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:691100-691232:-1:exon

position:691100:-1
position: 691100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691232:-1
position: 691232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:679670-680335:-1:exon

position:679670:-1
position: 679670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680335:-1
position: 680335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:654004-655834:-1:exon

position:655834:-1
position: 655834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFATC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NFATC1
product: nuclear factor of activated T-cells 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_018039662.1
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(654004..655834,679977..680335,691100..691232,697364..697419,703647..703787,704737..704909,706816..707018,717347..717506,727824..728895,741689..742157))
location: region:654004-742157:-1
so has part: feature:741689-742157:-1:exon
so has part: feature:727824-728895:-1:exon
so has part: feature:717347-717506:-1:exon
so has part: feature:706816-707018:-1:exon
so has part: feature:704737-704909:-1:exon
so has part: feature:703647-703787:-1:exon
so has part: feature:697364-697419:-1:exon
so has part: feature:691100-691232:-1:exon
so has part: feature:679977-680335:-1:exon
so has part: feature:654004-655834:-1:exon

position:742157:-1
position: 742157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741689-742157:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727824-728895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717347-717506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706816-707018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704737-704909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703647-703787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697364-697419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691100-691232:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679977-680335:-1:exon

position:679977:-1
position: 679977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:654004-655834:-1:exon

NFATC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NFATC1
product: nuclear factor of activated T-cells 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018039661.1
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(654004..655834,679670..680335,691100..691232,697364..697419,703647..703787,704737..704909,706816..707018,717347..717506,727824..728895,737121..737538))
location: region:654004-737538:-1
so has part: feature:737121-737538:-1:exon
so has part: feature:727824-728895:-1:exon
so has part: feature:717347-717506:-1:exon
so has part: feature:706816-707018:-1:exon
so has part: feature:704737-704909:-1:exon
so has part: feature:703647-703787:-1:exon
so has part: feature:697364-697419:-1:exon
so has part: feature:691100-691232:-1:exon
so has part: feature:679670-680335:-1:exon
so has part: feature:654004-655834:-1:exon

position:737538:-1
position: 737538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:737121-737538:-1:exon

position:737121:-1
position: 737121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:727824-728895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717347-717506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706816-707018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704737-704909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703647-703787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697364-697419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691100-691232:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679670-680335:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:654004-655834:-1:exon

NFATC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NFATC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 1 isoform X3
translation: MPSTSFPVPSKFPLGPPVAVGGSGETLGPSAPAGGTMKSAEEEHYGYATPGLGAGLPLSAAHPSLPAPCHDLQSSAAGVSTVGYGGAVDSGPSGYFLSSGGIRPNGAPALESPRIEITSYLGLHHSSSQFLHEVDVEDVLPKRSPSTATLNLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESSFSYPYASPQTSPWQSPCVSPKTTDPEEGFPRGLGACGLLGSPRHSPSTSPRTSVTEESWLGARTSRPSSPCNKRKYGLDGRQLSCSPHPSPTPSPQGSPRVSVTDDTWLGNTTQYTSSAIVAAINALSTDSSLDLGDGVPVKARKTTLDHSPAVALKVEPAGEELGATPPRRGAQPEVLAAPPHIGKGAFCDQYLLVPQHPYPWARPRSPTPCASPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPSVQLHGYVESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEAVVCSTKVLEIPLLPENSMRATIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSAASGPVLGGKRMVLSGHNFLQDSKVIFVEKAPDGHHIWEMEAKTEGDLCKPNSLVVEIPPFRNQRITSPVQVSFYVCNGKRKRSQYQHFTYLPANVPIIKTEPSDDYEPALTCGPMSQGLSPLPKPCYGQPLALPPDPGACLMPGFPSRPQGSASPELHDLSCAPYGSATAGPGHSPLGLPRPVGGVLASQEAPRPSGVPPGPPQPPPPTLLQPQVSPTSSGSCSPGRRPALCPHSPSSPLPPGTREPTHLQPCGPAHPCGTGHQQHQPLEVPSSEPAAARPPPPPEVREDSNRSLAPISVTVKREPQELDPLDLDDVNEIIRNDLSSTNIHS
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(655785..655834,679670..680335,691100..691232,697364..697419,703647..703787,704737..704909,706816..707018,717347..717506,727824..728895,741689..741815))
location: region:655785-741815:-1
so has part: feature:741689-741815:-1:exon
so has part: feature:727824-728895:-1:exon
so has part: feature:717347-717506:-1:exon
so has part: feature:706816-707018:-1:exon
so has part: feature:704737-704909:-1:exon
so has part: feature:703647-703787:-1:exon
so has part: feature:697364-697419:-1:exon
so has part: feature:691100-691232:-1:exon
so has part: feature:679670-680335:-1:exon
so has part: feature:655785-655834:-1:exon

XP_017895149.1
type: Protein
SIO_000068: ncbiprotein

position:655785:-1
position: 655785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741815:-1
position: 741815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741689-741815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727824-728895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717347-717506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706816-707018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704737-704909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703647-703787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697364-697419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691100-691232:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679670-680335:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:655785-655834:-1:exon

NFATC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NFATC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 1 isoform X4
translation: MTGLEEDQEFDFDFLFEFNQSDEGAVAAPAEHYGYATPGLGAGLPLSAAHPSLPAPCHDLQSSAAGVSTVGYGGAVDSGPSGYFLSSGGIRPNGAPALESPRIEITSYLGLHHSSSQFLHEVDVEDVLPKRSPSTATLNLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESSFSYPYASPQTSPWQSPCVSPKTTDPEEGFPRGLGACGLLGSPRHSPSTSPRTSVTEESWLGARTSRPSSPCNKRKYGLDGRQLSCSPHPSPTPSPQGSPRVSVTDDTWLGNTTQYTSSAIVAAINALSTDSSLDLGDGVPVKARKTTLDHSPAVALKVEPAGEELGATPPRRGAQPEVLAAPPHIGKGAFCDQYLLVPQHPYPWARPRSPTPCASPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPSVQLHGYVESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEAVVCSTKVLEIPLLPENSMRATIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSAASGPVLGGKRMVLSGHNFLQDSKVIFVEKAPDGHHIWEMEAKTEGDLCKPNSLVVEIPPFRNQRITSPVQVSFYVCNGKRKRSQYQHFTYLPANVPIIKTEPSDDYEPALTCGPMSQGLSPLPKPCYGQPLALPPDPGACLMPGFPSRPQGSASPELHDLSCAPYGSATAGPGHSPLGLPRPVGGVLASQEAPRPSGVPPGPPQPPPPTLLQPQVSPTSSGSCSPGRRPALCPHSPSSPLPPGTREPTHLQPCGPAHPCGTGHQQHQPLEVPSSEPAAARPPPPPEVREDSNRSLAPISVTVKREPQELDPLDLDDVNEIIRNDLSSTNIHS
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(655785..655834,679670..680335,691100..691232,697364..697419,703647..703787,704737..704909,706816..707018,717347..717506,727824..728895,737121..737211))
location: region:655785-737211:-1
so has part: feature:737121-737211:-1:exon
so has part: feature:727824-728895:-1:exon
so has part: feature:717347-717506:-1:exon
so has part: feature:706816-707018:-1:exon
so has part: feature:704737-704909:-1:exon
so has part: feature:703647-703787:-1:exon
so has part: feature:697364-697419:-1:exon
so has part: feature:691100-691232:-1:exon
so has part: feature:679670-680335:-1:exon
so has part: feature:655785-655834:-1:exon

XP_017895150.1
type: Protein
SIO_000068: ncbiprotein

position:737211:-1
position: 737211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:737121-737211:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727824-728895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717347-717506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706816-707018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704737-704909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703647-703787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697364-697419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691100-691232:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679670-680335:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:655785-655834:-1:exon

NFATC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NFATC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 1 isoform X5
translation: MPSTSFPVPSKFPLGPPVAVGGSGETLGPSAPAGGTMKSAEEEHYGYATPGLGAGLPLSAAHPSLPAPCHDLQSSAAGVSTVGYGGAVDSGPSGYFLSSGGIRPNGAPALESPRIEITSYLGLHHSSSQFLHEVDVEDVLPKRSPSTATLNLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESSFSYPYASPQTSPWQSPCVSPKTTDPEEGFPRGLGACGLLGSPRHSPSTSPRTSVTEESWLGARTSRPSSPCNKRKYGLDGRQLSCSPHPSPTPSPQGSPRVSVTDDTWLGNTTQYTSSAIVAAINALSTDSSLDLGDGVPVKARKTTLDHSPAVALKVEPAGEELGATPPRRGAQPEVLAAPPHIGKGAFCDQYLLVPQHPYPWARPRSPTPCASPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPSVQLHGYVESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEAVVCSTKVLEIPLLPENSMRATIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSAASGPVLGGKRMVLSGHNFLQDSKVIFVEKAPDGHHIWEMEAKTEGDLCKPNSLVVEIPPFRNQRITSPVQVSFYVCNGKRKRSQYQHFTYLPANVPIIKTEPSDDYEPALTCGPMSQGLSPLPKPCYGQPLALPPDPGACLMPGFPSRPQGSASPELHDLSCAPYGSATAGPGHSPLGLPRPVGGVLASQEAPRPSGVPPGPPQPPPPTLLQPQ
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(655832..655834,679977..680335,691100..691232,697364..697419,703647..703787,704737..704909,706816..707018,717347..717506,727824..728895,741689..741815))
location: region:655832-741815:-1
so has part: feature:741689-741815:-1:exon
so has part: feature:727824-728895:-1:exon
so has part: feature:717347-717506:-1:exon
so has part: feature:706816-707018:-1:exon
so has part: feature:704737-704909:-1:exon
so has part: feature:703647-703787:-1:exon
so has part: feature:697364-697419:-1:exon
so has part: feature:691100-691232:-1:exon
so has part: feature:679977-680335:-1:exon
so has part: feature:655832-655834:-1:exon

XP_017895151.1
type: Protein
SIO_000068: ncbiprotein

position:655832:-1
position: 655832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741689-741815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727824-728895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717347-717506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706816-707018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704737-704909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703647-703787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697364-697419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691100-691232:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679977-680335:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:655832-655834:-1:exon

NFATC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NFATC1
product: nuclear factor of activated T-cells 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018039658.1
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(663169..664488,679670..680335,691100..691232,697364..697419,703647..703787,704737..704909,706816..707018,717347..717506,727824..728895,741689..742159))
location: region:663169-742159:-1
so has part: feature:741689-742159:-1:exon
so has part: feature:727824-728895:-1:exon
so has part: feature:717347-717506:-1:exon
so has part: feature:706816-707018:-1:exon
so has part: feature:704737-704909:-1:exon
so has part: feature:703647-703787:-1:exon
so has part: feature:697364-697419:-1:exon
so has part: feature:691100-691232:-1:exon
so has part: feature:679670-680335:-1:exon
so has part: feature:663169-664488:-1:exon

position:663169:-1
position: 663169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741689-742159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727824-728895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717347-717506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706816-707018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704737-704909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703647-703787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697364-697419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691100-691232:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679670-680335:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:663169-664488:-1:exon

position:664488:-1
position: 664488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFATC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NFATC1
product: nuclear factor of activated T-cells 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018039659.1
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(663169..664488,679670..680335,691100..691232,697364..697419,703647..703787,704737..704909,706816..707018,717347..717506,727824..728895,737121..737538))
location: region:663169-737538:-1
so has part: feature:737121-737538:-1:exon
so has part: feature:727824-728895:-1:exon
so has part: feature:717347-717506:-1:exon
so has part: feature:706816-707018:-1:exon
so has part: feature:704737-704909:-1:exon
so has part: feature:703647-703787:-1:exon
so has part: feature:697364-697419:-1:exon
so has part: feature:691100-691232:-1:exon
so has part: feature:679670-680335:-1:exon
so has part: feature:663169-664488:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:737121-737538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727824-728895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717347-717506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706816-707018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704737-704909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703647-703787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697364-697419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691100-691232:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679670-680335:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:663169-664488:-1:exon

NFATC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NFATC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
translation: MPSTSFPVPSKFPLGPPVAVGGSGETLGPSAPAGGTMKSAEEEHYGYATPGLGAGLPLSAAHPSLPAPCHDLQSSAAGVSTVGYGGAVDSGPSGYFLSSGGIRPNGAPALESPRIEITSYLGLHHSSSQFLHEVDVEDVLPKRSPSTATLNLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESSFSYPYASPQTSPWQSPCVSPKTTDPEEGFPRGLGACGLLGSPRHSPSTSPRTSVTEESWLGARTSRPSSPCNKRKYGLDGRQLSCSPHPSPTPSPQGSPRVSVTDDTWLGNTTQYTSSAIVAAINALSTDSSLDLGDGVPVKARKTTLDHSPAVALKVEPAGEELGATPPRRGAQPEVLAAPPHIGKGAFCDQYLLVPQHPYPWARPRSPTPCASPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPSVQLHGYVESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEAVVCSTKVLEIPLLPENSMRATIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSAASGPVLGGKRMVLSGHNFLQDSKVIFVEKAPDGHHIWEMEAKTEGDLCKPNSLVVEIPPFRNQRITSPVQVSFYVCNGKRKRSQYQHFTYLPANVPIIKTEPSDDYEPALTCGPMSQGLSPLPKPCYGQPLALPPDPGACLMPGFPSRPQGSASPELHDLSCAPYGSATAGPGHSPLGLPRPVGGVLASQEAPRPSGVPPGPPQPPPPTLLQPQVSPTSSGSCSPGRRPALCPHSPSSPLPPGTREPTHLQPCGPAHPCGTGHQQHQPLEVPSSEPAAARPPPPPEVREDSNRSLAPISVTVKREPQELDPLDLDDGTSSLGECVPRRHRAGPGKVLVGGLMTPVSNAERAWHGWNNGLGHMEGVHHTPAGGRGEQGPPRHVAPTPHGRCSFHTGRLHYLE
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(664232..664488,679670..680335,691100..691232,697364..697419,703647..703787,704737..704909,706816..707018,717347..717506,727824..728895,741689..741815))
location: region:664232-741815:-1
so has part: feature:741689-741815:-1:exon
so has part: feature:727824-728895:-1:exon
so has part: feature:717347-717506:-1:exon
so has part: feature:706816-707018:-1:exon
so has part: feature:704737-704909:-1:exon
so has part: feature:703647-703787:-1:exon
so has part: feature:697364-697419:-1:exon
so has part: feature:691100-691232:-1:exon
so has part: feature:679670-680335:-1:exon
so has part: feature:664232-664488:-1:exon

XP_017895147.1
type: Protein
SIO_000068: ncbiprotein

position:664232:-1
position: 664232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741689-741815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727824-728895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717347-717506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706816-707018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704737-704909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703647-703787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697364-697419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691100-691232:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679670-680335:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:664232-664488:-1:exon

NFATC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NFATC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 1 isoform X2
translation: MTGLEEDQEFDFDFLFEFNQSDEGAVAAPAEHYGYATPGLGAGLPLSAAHPSLPAPCHDLQSSAAGVSTVGYGGAVDSGPSGYFLSSGGIRPNGAPALESPRIEITSYLGLHHSSSQFLHEVDVEDVLPKRSPSTATLNLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESSFSYPYASPQTSPWQSPCVSPKTTDPEEGFPRGLGACGLLGSPRHSPSTSPRTSVTEESWLGARTSRPSSPCNKRKYGLDGRQLSCSPHPSPTPSPQGSPRVSVTDDTWLGNTTQYTSSAIVAAINALSTDSSLDLGDGVPVKARKTTLDHSPAVALKVEPAGEELGATPPRRGAQPEVLAAPPHIGKGAFCDQYLLVPQHPYPWARPRSPTPCASPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPSVQLHGYVESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEAVVCSTKVLEIPLLPENSMRATIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSAASGPVLGGKRMVLSGHNFLQDSKVIFVEKAPDGHHIWEMEAKTEGDLCKPNSLVVEIPPFRNQRITSPVQVSFYVCNGKRKRSQYQHFTYLPANVPIIKTEPSDDYEPALTCGPMSQGLSPLPKPCYGQPLALPPDPGACLMPGFPSRPQGSASPELHDLSCAPYGSATAGPGHSPLGLPRPVGGVLASQEAPRPSGVPPGPPQPPPPTLLQPQVSPTSSGSCSPGRRPALCPHSPSSPLPPGTREPTHLQPCGPAHPCGTGHQQHQPLEVPSSEPAAARPPPPPEVREDSNRSLAPISVTVKREPQELDPLDLDDGTSSLGECVPRRHRAGPGKVLVGGLMTPVSNAERAWHGWNNGLGHMEGVHHTPAGGRGEQGPPRHVAPTPHGRCSFHTGRLHYLE
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(664232..664488,679670..680335,691100..691232,697364..697419,703647..703787,704737..704909,706816..707018,717347..717506,727824..728895,737121..737211))
location: region:664232-737211:-1
so has part: feature:737121-737211:-1:exon
so has part: feature:727824-728895:-1:exon
so has part: feature:717347-717506:-1:exon
so has part: feature:706816-707018:-1:exon
so has part: feature:704737-704909:-1:exon
so has part: feature:703647-703787:-1:exon
so has part: feature:697364-697419:-1:exon
so has part: feature:691100-691232:-1:exon
so has part: feature:679670-680335:-1:exon
so has part: feature:664232-664488:-1:exon

XP_017895148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:737121-737211:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727824-728895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717347-717506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706816-707018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704737-704909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703647-703787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697364-697419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691100-691232:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:679670-680335:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:664232-664488:-1:exon

NFATC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NFATC1
product: nuclear factor of activated T-cells 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018039663.1
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(690675..691232,697364..697419,703647..703787,704737..704909,706816..707018,717347..717506,727824..728895,741689..742156))
location: region:690675-742156:-1
so has part: feature:741689-742156:-1:exon
so has part: feature:727824-728895:-1:exon
so has part: feature:717347-717506:-1:exon
so has part: feature:706816-707018:-1:exon
so has part: feature:704737-704909:-1:exon
so has part: feature:703647-703787:-1:exon
so has part: feature:697364-697419:-1:exon
so has part: feature:690675-691232:-1:exon

position:690675:-1
position: 690675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742156:-1
position: 742156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741689-742156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727824-728895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717347-717506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706816-707018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704737-704909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703647-703787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697364-697419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:690675-691232:-1:exon

NFATC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NFATC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 1 isoform X6
translation: MPSTSFPVPSKFPLGPPVAVGGSGETLGPSAPAGGTMKSAEEEHYGYATPGLGAGLPLSAAHPSLPAPCHDLQSSAAGVSTVGYGGAVDSGPSGYFLSSGGIRPNGAPALESPRIEITSYLGLHHSSSQFLHEVDVEDVLPKRSPSTATLNLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESSFSYPYASPQTSPWQSPCVSPKTTDPEEGFPRGLGACGLLGSPRHSPSTSPRTSVTEESWLGARTSRPSSPCNKRKYGLDGRQLSCSPHPSPTPSPQGSPRVSVTDDTWLGNTTQYTSSAIVAAINALSTDSSLDLGDGVPVKARKTTLDHSPAVALKVEPAGEELGATPPRRGAQPEVLAAPPHIGKGAFCDQYLLVPQHPYPWARPRSPTPCASPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPSVQLHGYVESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEAVVCSTKVLEIPLLPENSMRATIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSAASGPVLGGKRMVLSGHNFLQDSKVIFVEKAPDGHHIWEMEAKTEGDLCKPNSLVVEIPPFRNQRITSPVQVSFYVCNGKRKRSQYQHFTYLPANGNALFLTVNAANEPTGCFS
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(691041..691232,697364..697419,703647..703787,704737..704909,706816..707018,717347..717506,727824..728895,741689..741815))
location: region:691041-741815:-1
so has part: feature:741689-741815:-1:exon
so has part: feature:727824-728895:-1:exon
so has part: feature:717347-717506:-1:exon
so has part: feature:706816-707018:-1:exon
so has part: feature:704737-704909:-1:exon
so has part: feature:703647-703787:-1:exon
so has part: feature:697364-697419:-1:exon
so has part: feature:691041-691232:-1:exon

XP_017895152.1
type: Protein
SIO_000068: ncbiprotein

position:691041:-1
position: 691041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741689-741815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727824-728895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717347-717506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706816-707018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704737-704909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703647-703787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697364-697419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691041-691232:-1:exon

ATP9B
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ATP9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(754348..908398)
location: region:754348-908398:-1
so has part: feature:754348-908398:-1:exon
subclass of: SO_0000010

102188453
type: Gene
SIO_000068: ncbigene

position:754348:-1
position: 754348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908398:-1
position: 908398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754348-908398:-1:exon

ATP9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ATP9B
product: ATPase phospholipid transporting 9B (putative), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_018039529.1
SIO_010081: ATP9B
subclass of: SO_0000673
so part of: ATP9B
location: complement(join(754348..754922,756270..756473,757089..757146,757371..757479,758861..758925,759145..759300,759888..759952,760105..760249,761520..761609,763406..763504,765914..766084,766183..766266,767602..767694,768266..768427,776374..776619,779381..779493,786397..786539,797560..797720,826872..826948,833597..833672,839038..839118,847071..847165,875669..875777,876596..876709,882772..882922,893376..893549,908213..908398))
location: region:754348-908398:-1
so has part: feature:908213-908398:-1:exon
so has part: feature:893376-893549:-1:exon
so has part: feature:882772-882922:-1:exon
so has part: feature:876596-876709:-1:exon
so has part: feature:875669-875777:-1:exon
so has part: feature:847071-847165:-1:exon
so has part: feature:839038-839118:-1:exon
so has part: feature:833597-833672:-1:exon
so has part: feature:826872-826948:-1:exon
so has part: feature:797560-797720:-1:exon
so has part: feature:786397-786539:-1:exon
so has part: feature:779381-779493:-1:exon
so has part: feature:776374-776619:-1:exon
so has part: feature:768266-768427:-1:exon
so has part: feature:767602-767694:-1:exon
so has part: feature:766183-766266:-1:exon
so has part: feature:765914-766084:-1:exon
so has part: feature:763406-763504:-1:exon
so has part: feature:761520-761609:-1:exon
so has part: feature:760105-760249:-1:exon
so has part: feature:759888-759952:-1:exon
so has part: feature:759145-759300:-1:exon
so has part: feature:758861-758925:-1:exon
so has part: feature:757371-757479:-1:exon
so has part: feature:757089-757146:-1:exon
so has part: feature:756270-756473:-1:exon
so has part: feature:754348-754922:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:908213-908398:-1:exon

position:908213:-1
position: 908213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:893376-893549:-1:exon

position:893376:-1
position: 893376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893549:-1
position: 893549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:882772-882922:-1:exon

position:882772:-1
position: 882772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882922:-1
position: 882922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:876596-876709:-1:exon

position:876596:-1
position: 876596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876709:-1
position: 876709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:875669-875777:-1:exon

position:875669:-1
position: 875669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875777:-1
position: 875777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:847071-847165:-1:exon

position:847071:-1
position: 847071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847165:-1
position: 847165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:839038-839118:-1:exon

position:839038:-1
position: 839038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839118:-1
position: 839118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:833597-833672:-1:exon

position:833597:-1
position: 833597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833672:-1
position: 833672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:826872-826948:-1:exon

position:826872:-1
position: 826872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826948:-1
position: 826948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:797560-797720:-1:exon

position:797560:-1
position: 797560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797720:-1
position: 797720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:786397-786539:-1:exon

position:786397:-1
position: 786397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786539:-1
position: 786539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:779381-779493:-1:exon

position:779381:-1
position: 779381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779493:-1
position: 779493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:776374-776619:-1:exon

position:776374:-1
position: 776374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776619:-1
position: 776619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:768266-768427:-1:exon

position:768266:-1
position: 768266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768427:-1
position: 768427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:767602-767694:-1:exon

position:767602:-1
position: 767602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767694:-1
position: 767694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:766183-766266:-1:exon

position:766183:-1
position: 766183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766266:-1
position: 766266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:765914-766084:-1:exon

position:765914:-1
position: 765914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766084:-1
position: 766084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:763406-763504:-1:exon

position:763406:-1
position: 763406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763504:-1
position: 763504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:761520-761609:-1:exon

position:761520:-1
position: 761520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761609:-1
position: 761609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:760105-760249:-1:exon

position:760105:-1
position: 760105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760249:-1
position: 760249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:759888-759952:-1:exon

position:759888:-1
position: 759888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759952:-1
position: 759952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:759145-759300:-1:exon

position:759145:-1
position: 759145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759300:-1
position: 759300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:758861-758925:-1:exon

position:758861:-1
position: 758861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758925:-1
position: 758925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:757371-757479:-1:exon

position:757371:-1
position: 757371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757479:-1
position: 757479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:757089-757146:-1:exon

position:757089:-1
position: 757089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757146:-1
position: 757146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:756270-756473:-1:exon

position:756270:-1
position: 756270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756473:-1
position: 756473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:754348-754922:-1:exon

position:754922:-1
position: 754922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ATP9B
product: ATPase phospholipid transporting 9B (putative), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_018039527.1
SIO_010081: ATP9B
subclass of: SO_0000673
so part of: ATP9B
location: complement(join(754348..754922,756270..756473,757089..757146,757371..757479,758861..758925,759145..759300,759888..759952,760105..760249,761520..761609,763406..763504,765914..766084,766183..766266,767602..767694,768266..768427,776374..776619,779381..779493,786397..786539,797560..797720,826872..826948,833597..833672,839038..839118,847071..847165,859852..859903,865136..865194,875669..875777,876596..876709,882772..882922,893376..893549,908213..908398))
location: region:754348-908398:-1
so has part: feature:908213-908398:-1:exon
so has part: feature:893376-893549:-1:exon
so has part: feature:882772-882922:-1:exon
so has part: feature:876596-876709:-1:exon
so has part: feature:875669-875777:-1:exon
so has part: feature:865136-865194:-1:exon
so has part: feature:859852-859903:-1:exon
so has part: feature:847071-847165:-1:exon
so has part: feature:839038-839118:-1:exon
so has part: feature:833597-833672:-1:exon
so has part: feature:826872-826948:-1:exon
so has part: feature:797560-797720:-1:exon
so has part: feature:786397-786539:-1:exon
so has part: feature:779381-779493:-1:exon
so has part: feature:776374-776619:-1:exon
so has part: feature:768266-768427:-1:exon
so has part: feature:767602-767694:-1:exon
so has part: feature:766183-766266:-1:exon
so has part: feature:765914-766084:-1:exon
so has part: feature:763406-763504:-1:exon
so has part: feature:761520-761609:-1:exon
so has part: feature:760105-760249:-1:exon
so has part: feature:759888-759952:-1:exon
so has part: feature:759145-759300:-1:exon
so has part: feature:758861-758925:-1:exon
so has part: feature:757371-757479:-1:exon
so has part: feature:757089-757146:-1:exon
so has part: feature:756270-756473:-1:exon
so has part: feature:754348-754922:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:908213-908398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893376-893549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:882772-882922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876596-876709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:875669-875777:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865136-865194:-1:exon

position:865136:-1
position: 865136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865194:-1
position: 865194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:859852-859903:-1:exon

position:859852:-1
position: 859852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859903:-1
position: 859903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:847071-847165:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:839038-839118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:833597-833672:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826872-826948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:797560-797720:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:786397-786539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:779381-779493:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:776374-776619:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:768266-768427:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:767602-767694:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:766183-766266:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:765914-766084:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763406-763504:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761520-761609:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:760105-760249:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:759888-759952:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:759145-759300:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:758861-758925:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:757371-757479:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:757089-757146:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:756270-756473:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:754348-754922:-1:exon

ATP9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ATP9B
product: ATPase phospholipid transporting 9B (putative), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_018039528.1
SIO_010081: ATP9B
subclass of: SO_0000673
so part of: ATP9B
location: complement(join(754348..754922,756270..756473,757089..757125,757371..757479,758861..758925,759145..759300,759888..759952,760105..760249,761520..761609,763406..763504,765914..766084,766183..766266,767602..767694,768266..768427,776374..776619,779381..779493,786397..786539,797560..797720,826872..826948,833597..833672,839038..839118,847071..847165,859852..859903,865136..865194,875669..875777,876596..876709,882772..882922,893376..893549,908213..908334))
location: region:754348-908334:-1
so has part: feature:908213-908334:-1:exon
so has part: feature:893376-893549:-1:exon
so has part: feature:882772-882922:-1:exon
so has part: feature:876596-876709:-1:exon
so has part: feature:875669-875777:-1:exon
so has part: feature:865136-865194:-1:exon
so has part: feature:859852-859903:-1:exon
so has part: feature:847071-847165:-1:exon
so has part: feature:839038-839118:-1:exon
so has part: feature:833597-833672:-1:exon
so has part: feature:826872-826948:-1:exon
so has part: feature:797560-797720:-1:exon
so has part: feature:786397-786539:-1:exon
so has part: feature:779381-779493:-1:exon
so has part: feature:776374-776619:-1:exon
so has part: feature:768266-768427:-1:exon
so has part: feature:767602-767694:-1:exon
so has part: feature:766183-766266:-1:exon
so has part: feature:765914-766084:-1:exon
so has part: feature:763406-763504:-1:exon
so has part: feature:761520-761609:-1:exon
so has part: feature:760105-760249:-1:exon
so has part: feature:759888-759952:-1:exon
so has part: feature:759145-759300:-1:exon
so has part: feature:758861-758925:-1:exon
so has part: feature:757371-757479:-1:exon
so has part: feature:757089-757125:-1:exon
so has part: feature:756270-756473:-1:exon
so has part: feature:754348-754922:-1:exon

position:908334:-1
position: 908334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908213-908334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893376-893549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:882772-882922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876596-876709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:875669-875777:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865136-865194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:859852-859903:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:847071-847165:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:839038-839118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:833597-833672:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826872-826948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:797560-797720:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:786397-786539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:779381-779493:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:776374-776619:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:768266-768427:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:767602-767694:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:766183-766266:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:765914-766084:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763406-763504:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761520-761609:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:760105-760249:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:759888-759952:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:759145-759300:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:758861-758925:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:757371-757479:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:757089-757125:-1:exon

position:757125:-1
position: 757125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:756270-756473:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:754348-754922:-1:exon

ATP9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ATP9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable phospholipid-transporting ATPase IIB isoform X3
translation: MADQIPLYPVRSAAAVAAANRKRAAYFSAAGPGPGPDRPSRYQLEDESAHLDEMPLMMSEEGFENDESDYHTLPRARITQRKRGLEWFVCGGWKFLCTSCCDWLINICQRKRELKARTVWLGCPEKCEEKHPRNSIKNQKYNIFTFIPGVLYEQFKFFLNLYFLIVSCSQFVPALKIGYLYTYWAPLGFVLAVTIMREAVDEFRRFQRDKEVNSQLYSKLTVRGSCFIRTDQLDGETDWKLKVAVSCTQRLPALGDLFSINAYVYAQKPQLDIHSFEGTFTREDSDPPVHESLSIENTLWASTVVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNQLTKALFLALVALSVVMVTLQGFAGPWYRSLFRFLLLFSYIIPISLRVNLDMGKAAYGWMIMKDEHIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMVFKRLHLGTVSYGTDTMDEIQNHLVNAYAQTQCQAGGSSTISTPPRKAASSAPKVRRSVSSRVHEAVKAVALCHNVTPVYEARGAAGETEVAEADQDFSDDNRTYQASSPDEVALVQWTESVGLTLVSRDLTSMQLRTPSGQILTFCILQTFPFTSESKRMGVIVRDESTAEITFYMKGADVAMASIVQYNDWLEEECGNMAREGLRTLVVAKRALTEEQYQDFESRYNQAKLSLHDRTLKVAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKLETATCIAKSSHLVSRTQDTHVFRPVTSRGEAHLELNAFRRKHDCALVIPGDALEVCLKYYEHEFVELACQCPAVVCCRCSPTQKAHIVKLLQQHTGRRTCAIGDGGNDVSMIQAADCGIGIEGKEGRQASLAADFSITRFKHVGRLLMVHGRSSYKRSAALGQFVMHRGLIISTMQAVFSSVFYFASVPLYQGFLMVGYATVYTMFPVFSLVLDQDVKPEMAMLYPELYKDLTKGRSLSFKTFLVWVLISIYQGGILMFGALVLFESEFVHVVAISFTALVLTELLMVALTIRTWHWLMVVAQLLSLGCYVASLAFLNEYFDVAFITTVTFVWKVSAITVVSCLPLYVLKYLKRKLSPPSYSKLSS
SIO_010081: ATP9B
subclass of: SO_0000673
so part of: ATP9B
location: complement(join(754786..754922,756270..756473,757089..757146,757371..757479,758861..758925,759145..759300,759888..759952,760105..760249,761520..761609,763406..763504,765914..766084,766183..766266,767602..767694,768266..768427,776374..776619,779381..779493,786397..786539,797560..797720,826872..826948,833597..833672,839038..839118,847071..847165,875669..875777,876596..876709,882772..882922,893376..893549,908213..908334))
location: region:754786-908334:-1
so has part: feature:908213-908334:-1:exon
so has part: feature:893376-893549:-1:exon
so has part: feature:882772-882922:-1:exon
so has part: feature:876596-876709:-1:exon
so has part: feature:875669-875777:-1:exon
so has part: feature:847071-847165:-1:exon
so has part: feature:839038-839118:-1:exon
so has part: feature:833597-833672:-1:exon
so has part: feature:826872-826948:-1:exon
so has part: feature:797560-797720:-1:exon
so has part: feature:786397-786539:-1:exon
so has part: feature:779381-779493:-1:exon
so has part: feature:776374-776619:-1:exon
so has part: feature:768266-768427:-1:exon
so has part: feature:767602-767694:-1:exon
so has part: feature:766183-766266:-1:exon
so has part: feature:765914-766084:-1:exon
so has part: feature:763406-763504:-1:exon
so has part: feature:761520-761609:-1:exon
so has part: feature:760105-760249:-1:exon
so has part: feature:759888-759952:-1:exon
so has part: feature:759145-759300:-1:exon
so has part: feature:758861-758925:-1:exon
so has part: feature:757371-757479:-1:exon
so has part: feature:757089-757146:-1:exon
so has part: feature:756270-756473:-1:exon
so has part: feature:754786-754922:-1:exon

XP_017895018.1
type: Protein
SIO_000068: ncbiprotein

position:754786:-1
position: 754786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908213-908334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893376-893549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:882772-882922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876596-876709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:875669-875777:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:847071-847165:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:839038-839118:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:833597-833672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:826872-826948:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:797560-797720:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:786397-786539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:779381-779493:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:776374-776619:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:768266-768427:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:767602-767694:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:766183-766266:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:765914-766084:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:763406-763504:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:761520-761609:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:760105-760249:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:759888-759952:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:759145-759300:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:758861-758925:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:757371-757479:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:757089-757146:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:756270-756473:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:754786-754922:-1:exon

ATP9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ATP9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable phospholipid-transporting ATPase IIB isoform X2
translation: MADQIPLYPVRSAAAVAAANRKRAAYFSAAGPGPGPDRPSRYQLEDESAHLDEMPLMMSEEGFENDESDYHTLPRARITQRKRGLEWFVCGGWKFLCTSCCDWLINICQRKRELKARTVWLGCPEKCEEKHPRNSIKNQKYNIFTFIPGVLYEQFKFFLNLYFLIVSCSQFVPALKIGYLYTYWAPLGFVLAVTIMREAVDEFRRFQRDKEVNSQLYSKLTVRGKVQVKSSDIQVGDLIIVEKNQRIPSDMVFLRTSEKAGSCFIRTDQLDGETDWKLKVAVSCTQRLPALGDLFSINAYVYAQKPQLDIHSFEGTFTREDSDPPVHESLSIENTLWASTVVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNQLTKALFLALVALSVVMVTLQGFAGPWYRSLFRFLLLFSYIIPISLRVNLDMGKAAYGWMIMKDEHIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMVFKRLHLGTVSYGTDTMDEIQNHLVNAYAQTQCQAGGSSTISTPPRKAASSAPKVRRSVSSRVHEAVKAVALCHNVTPVYEARGAAGETEVAEADQDFSDDNRTYQASSPDEVALVQWTESVGLTLVSRDLTSMQLRTPSGQILTFCILQTFPFTSESKRMGVIVRDESTAEITFYMKGADVAMASIVQYNDWLEEECGNMAREGLRTLVVAKRALTEEQYQDFESRYNQAKLSLHDRTLKVAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKLETATCIAKSSHLVSRTQDTHVFRPVTSRGEAHLELNAFRRKHDCALVIPGDALEVCLKYYEHEFVELACQCPAVVCCRCSPTQKAHIVKLLQQHTGRRTCAIGDGGNDVSMIQAADCGIGIEGKEGRQASLAADFSITRFKHVGRLLMVHGRSSYKRSAALGQFVMHRGLIISTMQAVFSSVFYFASVPLYQGFLMVGYATVYTMFPVFSLVLDQDVKPEMAMLYPELYKDLTKTFLVWVLISIYQGGILMFGALVLFESEFVHVVAISFTALVLTELLMVALTIRTWHWLMVVAQLLSLGCYVASLAFLNEYFDVAFITTVTFVWKVSAITVVSCLPLYVLKYLKRKLSPPSYSKLSS
SIO_010081: ATP9B
subclass of: SO_0000673
so part of: ATP9B
location: complement(join(754786..754922,756270..756473,757089..757125,757371..757479,758861..758925,759145..759300,759888..759952,760105..760249,761520..761609,763406..763504,765914..766084,766183..766266,767602..767694,768266..768427,776374..776619,779381..779493,786397..786539,797560..797720,826872..826948,833597..833672,839038..839118,847071..847165,859852..859903,865136..865194,875669..875777,876596..876709,882772..882922,893376..893549,908213..908334))
location: region:754786-908334:-1
so has part: feature:908213-908334:-1:exon
so has part: feature:893376-893549:-1:exon
so has part: feature:882772-882922:-1:exon
so has part: feature:876596-876709:-1:exon
so has part: feature:875669-875777:-1:exon
so has part: feature:865136-865194:-1:exon
so has part: feature:859852-859903:-1:exon
so has part: feature:847071-847165:-1:exon
so has part: feature:839038-839118:-1:exon
so has part: feature:833597-833672:-1:exon
so has part: feature:826872-826948:-1:exon
so has part: feature:797560-797720:-1:exon
so has part: feature:786397-786539:-1:exon
so has part: feature:779381-779493:-1:exon
so has part: feature:776374-776619:-1:exon
so has part: feature:768266-768427:-1:exon
so has part: feature:767602-767694:-1:exon
so has part: feature:766183-766266:-1:exon
so has part: feature:765914-766084:-1:exon
so has part: feature:763406-763504:-1:exon
so has part: feature:761520-761609:-1:exon
so has part: feature:760105-760249:-1:exon
so has part: feature:759888-759952:-1:exon
so has part: feature:759145-759300:-1:exon
so has part: feature:758861-758925:-1:exon
so has part: feature:757371-757479:-1:exon
so has part: feature:757089-757125:-1:exon
so has part: feature:756270-756473:-1:exon
so has part: feature:754786-754922:-1:exon

XP_017895017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:908213-908334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893376-893549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:882772-882922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876596-876709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:875669-875777:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865136-865194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:859852-859903:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:847071-847165:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:839038-839118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:833597-833672:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826872-826948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:797560-797720:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:786397-786539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:779381-779493:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:776374-776619:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:768266-768427:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:767602-767694:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:766183-766266:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:765914-766084:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763406-763504:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761520-761609:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:760105-760249:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:759888-759952:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:759145-759300:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:758861-758925:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:757371-757479:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:757089-757125:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:756270-756473:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:754786-754922:-1:exon

ATP9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ATP9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable phospholipid-transporting ATPase IIB isoform X1
translation: MADQIPLYPVRSAAAVAAANRKRAAYFSAAGPGPGPDRPSRYQLEDESAHLDEMPLMMSEEGFENDESDYHTLPRARITQRKRGLEWFVCGGWKFLCTSCCDWLINICQRKRELKARTVWLGCPEKCEEKHPRNSIKNQKYNIFTFIPGVLYEQFKFFLNLYFLIVSCSQFVPALKIGYLYTYWAPLGFVLAVTIMREAVDEFRRFQRDKEVNSQLYSKLTVRGKVQVKSSDIQVGDLIIVEKNQRIPSDMVFLRTSEKAGSCFIRTDQLDGETDWKLKVAVSCTQRLPALGDLFSINAYVYAQKPQLDIHSFEGTFTREDSDPPVHESLSIENTLWASTVVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNQLTKALFLALVALSVVMVTLQGFAGPWYRSLFRFLLLFSYIIPISLRVNLDMGKAAYGWMIMKDEHIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMVFKRLHLGTVSYGTDTMDEIQNHLVNAYAQTQCQAGGSSTISTPPRKAASSAPKVRRSVSSRVHEAVKAVALCHNVTPVYEARGAAGETEVAEADQDFSDDNRTYQASSPDEVALVQWTESVGLTLVSRDLTSMQLRTPSGQILTFCILQTFPFTSESKRMGVIVRDESTAEITFYMKGADVAMASIVQYNDWLEEECGNMAREGLRTLVVAKRALTEEQYQDFESRYNQAKLSLHDRTLKVAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKLETATCIAKSSHLVSRTQDTHVFRPVTSRGEAHLELNAFRRKHDCALVIPGDALEVCLKYYEHEFVELACQCPAVVCCRCSPTQKAHIVKLLQQHTGRRTCAIGDGGNDVSMIQAADCGIGIEGKEGRQASLAADFSITRFKHVGRLLMVHGRSSYKRSAALGQFVMHRGLIISTMQAVFSSVFYFASVPLYQGFLMVGYATVYTMFPVFSLVLDQDVKPEMAMLYPELYKDLTKGRSLSFKTFLVWVLISIYQGGILMFGALVLFESEFVHVVAISFTALVLTELLMVALTIRTWHWLMVVAQLLSLGCYVASLAFLNEYFDVAFITTVTFVWKVSAITVVSCLPLYVLKYLKRKLSPPSYSKLSS
SIO_010081: ATP9B
subclass of: SO_0000673
so part of: ATP9B
location: complement(join(754786..754922,756270..756473,757089..757146,757371..757479,758861..758925,759145..759300,759888..759952,760105..760249,761520..761609,763406..763504,765914..766084,766183..766266,767602..767694,768266..768427,776374..776619,779381..779493,786397..786539,797560..797720,826872..826948,833597..833672,839038..839118,847071..847165,859852..859903,865136..865194,875669..875777,876596..876709,882772..882922,893376..893549,908213..908334))
location: region:754786-908334:-1
so has part: feature:908213-908334:-1:exon
so has part: feature:893376-893549:-1:exon
so has part: feature:882772-882922:-1:exon
so has part: feature:876596-876709:-1:exon
so has part: feature:875669-875777:-1:exon
so has part: feature:865136-865194:-1:exon
so has part: feature:859852-859903:-1:exon
so has part: feature:847071-847165:-1:exon
so has part: feature:839038-839118:-1:exon
so has part: feature:833597-833672:-1:exon
so has part: feature:826872-826948:-1:exon
so has part: feature:797560-797720:-1:exon
so has part: feature:786397-786539:-1:exon
so has part: feature:779381-779493:-1:exon
so has part: feature:776374-776619:-1:exon
so has part: feature:768266-768427:-1:exon
so has part: feature:767602-767694:-1:exon
so has part: feature:766183-766266:-1:exon
so has part: feature:765914-766084:-1:exon
so has part: feature:763406-763504:-1:exon
so has part: feature:761520-761609:-1:exon
so has part: feature:760105-760249:-1:exon
so has part: feature:759888-759952:-1:exon
so has part: feature:759145-759300:-1:exon
so has part: feature:758861-758925:-1:exon
so has part: feature:757371-757479:-1:exon
so has part: feature:757089-757146:-1:exon
so has part: feature:756270-756473:-1:exon
so has part: feature:754786-754922:-1:exon

XP_017895016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:908213-908334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893376-893549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:882772-882922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876596-876709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:875669-875777:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865136-865194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:859852-859903:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:847071-847165:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:839038-839118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:833597-833672:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826872-826948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:797560-797720:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:786397-786539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:779381-779493:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:776374-776619:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:768266-768427:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:767602-767694:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:766183-766266:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:765914-766084:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763406-763504:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761520-761609:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:760105-760249:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:759888-759952:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:759145-759300:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:758861-758925:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:757371-757479:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:757089-757146:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:756270-756473:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:754786-754922:-1:exon

ATP9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ATP9B
product: ATPase phospholipid transporting 9B (putative), transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_018039530.1
SIO_010081: ATP9B
subclass of: SO_0000673
so part of: ATP9B
location: complement(join(759164..759300,759770..759952,760105..760249,761520..761609,763406..763504,765914..766084,766183..766266,767602..767694,768266..768427,776374..776619,779381..779493,786397..786539,797560..797720,826872..826948,833597..833672,839038..839118,847071..847165,859852..859903,865136..865194,875669..875777,876596..876709,882772..882922,893376..893549,908213..908334))
location: region:759164-908334:-1
so has part: feature:908213-908334:-1:exon
so has part: feature:893376-893549:-1:exon
so has part: feature:882772-882922:-1:exon
so has part: feature:876596-876709:-1:exon
so has part: feature:875669-875777:-1:exon
so has part: feature:865136-865194:-1:exon
so has part: feature:859852-859903:-1:exon
so has part: feature:847071-847165:-1:exon
so has part: feature:839038-839118:-1:exon
so has part: feature:833597-833672:-1:exon
so has part: feature:826872-826948:-1:exon
so has part: feature:797560-797720:-1:exon
so has part: feature:786397-786539:-1:exon
so has part: feature:779381-779493:-1:exon
so has part: feature:776374-776619:-1:exon
so has part: feature:768266-768427:-1:exon
so has part: feature:767602-767694:-1:exon
so has part: feature:766183-766266:-1:exon
so has part: feature:765914-766084:-1:exon
so has part: feature:763406-763504:-1:exon
so has part: feature:761520-761609:-1:exon
so has part: feature:760105-760249:-1:exon
so has part: feature:759770-759952:-1:exon
so has part: feature:759164-759300:-1:exon

position:759164:-1
position: 759164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908213-908334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893376-893549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:882772-882922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876596-876709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:875669-875777:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865136-865194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:859852-859903:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:847071-847165:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:839038-839118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:833597-833672:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826872-826948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:797560-797720:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:786397-786539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:779381-779493:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:776374-776619:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:768266-768427:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:767602-767694:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:766183-766266:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:765914-766084:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763406-763504:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761520-761609:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:760105-760249:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:759770-759952:-1:exon

position:759770:-1
position: 759770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:759164-759300:-1:exon

ATP9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ATP9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable phospholipid-transporting ATPase IIB isoform X4
translation: MADQIPLYPVRSAAAVAAANRKRAAYFSAAGPGPGPDRPSRYQLEDESAHLDEMPLMMSEEGFENDESDYHTLPRARITQRKRGLEWFVCGGWKFLCTSCCDWLINICQRKRELKARTVWLGCPEKCEEKHPRNSIKNQKYNIFTFIPGVLYEQFKFFLNLYFLIVSCSQFVPALKIGYLYTYWAPLGFVLAVTIMREAVDEFRRFQRDKEVNSQLYSKLTVRGKVQVKSSDIQVGDLIIVEKNQRIPSDMVFLRTSEKAGSCFIRTDQLDGETDWKLKVAVSCTQRLPALGDLFSINAYVYAQKPQLDIHSFEGTFTREDSDPPVHESLSIENTLWASTVVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNQLTKALFLALVALSVVMVTLQGFAGPWYRSLFRFLLLFSYIIPISLRVNLDMGKAAYGWMIMKDEHIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMVFKRLHLGTVSYGTDTMDEIQNHLVNAYAQTQCQAGGSSTISTPPRKAASSAPKVRRSVSSRVHEAVKAVALCHNVTPVYEARGAAGETEVAEADQDFSDDNRTYQASSPDEVALVQWTESVGLTLVSRDLTSMQLRTPSGQILTFCILQTFPFTSESKRMGVIVRDESTAEITFYMKGADVAMASIVQYNDWLEEECGNMAREGLRTLVVAKRALTEEQYQDFESRYNQAKLSLHDRTLKVAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKLETATCIAKSSHLVSRTQDTHVFRPVTSRGEAHLELNAFRRKHDCALVIPGDALEVCLKYYEHEFVELACQCPAVVCCRCSPTQKAHIVKLLQQHTGRRTCAIGDGGNDVSMIQAADCGIGIEGKVRPGLSPPPPRPCSGRFQHMAGRGQGGAHRAAGAAPWRPGGAAGLAGS
SIO_010081: ATP9B
subclass of: SO_0000673
so part of: ATP9B
location: complement(join(759272..759300,759770..759952,760105..760249,761520..761609,763406..763504,765914..766084,766183..766266,767602..767694,768266..768427,776374..776619,779381..779493,786397..786539,797560..797720,826872..826948,833597..833672,839038..839118,847071..847165,859852..859903,865136..865194,875669..875777,876596..876709,882772..882922,893376..893549,908213..908334))
location: region:759272-908334:-1
so has part: feature:908213-908334:-1:exon
so has part: feature:893376-893549:-1:exon
so has part: feature:882772-882922:-1:exon
so has part: feature:876596-876709:-1:exon
so has part: feature:875669-875777:-1:exon
so has part: feature:865136-865194:-1:exon
so has part: feature:859852-859903:-1:exon
so has part: feature:847071-847165:-1:exon
so has part: feature:839038-839118:-1:exon
so has part: feature:833597-833672:-1:exon
so has part: feature:826872-826948:-1:exon
so has part: feature:797560-797720:-1:exon
so has part: feature:786397-786539:-1:exon
so has part: feature:779381-779493:-1:exon
so has part: feature:776374-776619:-1:exon
so has part: feature:768266-768427:-1:exon
so has part: feature:767602-767694:-1:exon
so has part: feature:766183-766266:-1:exon
so has part: feature:765914-766084:-1:exon
so has part: feature:763406-763504:-1:exon
so has part: feature:761520-761609:-1:exon
so has part: feature:760105-760249:-1:exon
so has part: feature:759770-759952:-1:exon
so has part: feature:759272-759300:-1:exon

XP_017895019.1
type: Protein
SIO_000068: ncbiprotein

position:759272:-1
position: 759272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908213-908334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893376-893549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:882772-882922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876596-876709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:875669-875777:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:865136-865194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:859852-859903:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:847071-847165:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:839038-839118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:833597-833672:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:826872-826948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:797560-797720:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:786397-786539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:779381-779493:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:776374-776619:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:768266-768427:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:767602-767694:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:766183-766266:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:765914-766084:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763406-763504:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761520-761609:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:760105-760249:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:759770-759952:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:759272-759300:-1:exon

SALL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SALL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(937162..956604)
location: region:937162-956604:-1
so has part: feature:937162-956604:-1:exon
subclass of: SO_0000010

102188725
type: Gene
SIO_000068: ncbigene

position:937162:-1
position: 937162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956604:-1
position: 956604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:937162-956604:-1:exon

SALL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SALL3
product: spalt like transcription factor 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018039807.1
SIO_010081: SALL3
subclass of: SO_0000673
so part of: SALL3
location: complement(join(937162..940080,941144..944600,956472..956604))
location: region:937162-956604:-1
so has part: feature:956472-956604:-1:exon
so has part: feature:941144-944600:-1:exon
so has part: feature:937162-940080:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:956472-956604:-1:exon

position:956472:-1
position: 956472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:941144-944600:-1:exon

position:941144:-1
position: 941144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944600:-1
position: 944600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:937162-940080:-1:exon

position:940080:-1
position: 940080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SALL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SALL3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sal-like protein 3
translation: MSRRKQAKPQHLKSDEELPPPDGAPEHAAPGEGAEDADSGNESRSGGEDTHVCEKCCAEFFKWADLLAHKEACTKNPLVLIVGEDEPAPPSEDFPEASPASSASERADSEAAEETAAAAAAPEGGEAAEARAPEREDEPMEVGAPADKGFQGPGAAHVGQPPPPPGPEPAPGAAYGMPSTNVTLETLLSTKVAVAQFSQTSRAAGAAGAGGGVAAAALPLILEQLVALQQQQVQQLQLIEQIRSQVALMSRPLPPSRPPLHPGPAAHPTLPLSAGAGPAATAQGPAAPPAAYEGPQHLATPASTASTPHVAGGGPSAPDLGAPRALALPRPPRPPPQAGASGGASRPQNAPTPPALGPGPLLSSAPSLPSPLLPQTSASSVIFPNPLVSIAATANALDPLSALMKHRKGKPPNVSVFEPKASTEDPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEYLDNVPTCSGIPYGMSLPPEKPVTTWLDSKPALPTVPTSVGLQLPPTLPGVGVGSYVDSPSLTPASRSPQRPSPASSECPSLSPGLTSSEAGVPVAAGSPQPAPAGSSLPKTEPVSLPCTNARVGDLPATAGQVSTASALADSGASPGLCSPVLPAGAEPFKAKFPFGGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHFGVHRAKPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPLPGGFQDATDAALPFDDKAADALSACDDDMDDNSLEDDAELKDVAGDPNKPLLAFSGSCPPSPPSVISSIAALENQMKMMDSVMSCPQLSALKSLENGSGESDHLSNDSSSAVGDLESRSAGSPALSESSSSLQALSPGNSNSESLPSKSPGLGAQEEPQETQLKTEKPDSPPPGPENGGALDLTATHPGRPAIKEEAPFSLLFLSRDRGKCASTVCLVCAKPFACRSALEIHLRSHTKERPFVCAACGRGCSTLGNLKQHLLTHRLRELPPQLLDPNFALGPSQGTPSLGPGSTPTTIKTEVNGHSKAGLLAEGPPLPAAVQVPPGPPTVMSPGLAPMLAPPPRRTPKQHNCQSCGKTFSSASALQIHERTHTGEKPFGCTICGRAFTTKGNLKVHMGTHMWNNAPARRGRRLSVENPMALLGGDALKFSEMFQKDLAARAMNVDPSFWNQYAAAITNGLAMKNNEISVIQNGGLPQLPVSLGGSALPPLGSLAAGLDKARPGSSPPIAGLDKANSDTGGSRPFTRFIEDNKEIGIN
SIO_010081: SALL3
subclass of: SO_0000673
so part of: SALL3
location: complement(join(939649..940080,941144..944600,956472..956553))
location: region:939649-956553:-1
so has part: feature:956472-956553:-1:exon
so has part: feature:941144-944600:-1:exon
so has part: feature:939649-940080:-1:exon

XP_017895296.1
type: Protein
SIO_000068: ncbiprotein

position:939649:-1
position: 939649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956553:-1
position: 956553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:956472-956553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:941144-944600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:939649-940080:-1:exon

LOC102182272
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102182272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1293998..1317485
location: region:1293998-1317485:1
so has part: feature:1293998-1317485:1:exon
subclass of: SO_0000011

102182272
type: Gene
SIO_000068: ncbigene

position:1293998:1
position: 1293998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317485:1
position: 1317485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293998-1317485:1:exon

LOC102182272
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102182272
product: uncharacterized LOC102182272
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_001297214.2
SIO_010081: LOC102182272
subclass of: SO_0000673
so part of: LOC102182272
location: join(1293998..1295754,1305797..1305943,1309933..1310141,1316062..1317485)
location: region:1293998-1317485:1
so has part: feature:1293998-1295754:1:exon
so has part: feature:1305797-1305943:1:exon
so has part: feature:1309933-1310141:1:exon
so has part: feature:1316062-1317485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1293998-1295754:1:exon

position:1295754:1
position: 1295754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1305797-1305943:1:exon

position:1305797:1
position: 1305797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1305943:1
position: 1305943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1309933-1310141:1:exon

position:1309933:1
position: 1309933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310141:1
position: 1310141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1316062-1317485:1:exon

position:1316062:1
position: 1316062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102184860
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102184860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1342319..1343401
location: region:1342319-1343401:1
so has part: feature:1342319-1343401:1:exon
subclass of: SO_0000010

102184860
type: Gene
SIO_000068: ncbigene

position:1342319:1
position: 1342319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343401:1
position: 1343401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1342319-1343401:1:exon

LOC102184860
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102184860
product: olfactory receptor 5L2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_018039343.1
SIO_010081: LOC102184860
subclass of: SO_0000673
so part of: LOC102184860
location: join(1342319..1342570,1342704..1343401)
location: region:1342319-1343401:1
so has part: feature:1342319-1342570:1:exon
so has part: feature:1342704-1343401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1342319-1342570:1:exon

position:1342570:1
position: 1342570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1342704-1343401:1:exon

position:1342704:1
position: 1342704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102184860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102184860
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1343208..1343210,aa:OTHER)
product: LOW QUALITY PROTEIN: olfactory receptor 5L2-like
translation: MDKENCTAVTDFILLGFSDAPELRVFLFQLYLSIYGVTVWGNLGMIALIQVSSGLHIPMYFFLSHLSFVDFCYSTISTPKMIANSLKEDRAISFLECTVQFYLFCTFGVTEVILLAVMAYGHFVAICDPLLYMVTMSQNLCVELVSCCYLNGAVCSVIHLCLALQIPSYRSNVINHFFCDLPPLLFLACSDVIVNQLVLYSVAIFYEIITIMVILTSYLFILITVLRMHSTEGKCKAFSTCASYLAAIIVFHXTILXLYCRPQSGNSMDTDKVATVFYTVVIPMVNPLIYSLRNKDVKEALRKVVSFKIFSQRIFS
SIO_010081: LOC102184860
subclass of: SO_0000673
so part of: LOC102184860
location: join(1342319..1342570,1342704..1343401)
location: region:1342319-1343401:1
so has part: feature:1342319-1342570:1:exon
so has part: feature:1342704-1343401:1:exon

XP_017894832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1342319-1342570:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1342704-1343401:1:exon

LOC108633761
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108633761
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1349721..1371239
location: region:1349721-1371239:1
so has part: feature:1349721-1371239:1:exon

108633761
type: Gene
SIO_000068: ncbigene

position:1349721:1
position: 1349721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1371239:1
position: 1371239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1349721-1371239:1:exon

LOC108633761
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633761
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC108633761
subclass of: SO_0000673
so part of: LOC108633761
location: 1349721..1350508
location: region:1349721-1350508:1
so has part: feature:1349721-1350508:1:exon

position:1350508:1
position: 1350508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1349721-1350508:1:exon

LOC108633761
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633761
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC108633761
subclass of: SO_0000673
so part of: LOC108633761
location: 1371055..1371239
location: region:1371055-1371239:1
so has part: feature:1371055-1371239:1:exon

position:1371055:1
position: 1371055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1371055-1371239:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1437497..1437568)
location: region:1437497-1437568:-1
so has part: feature:1437497-1437568:-1:exon
subclass of: SO_0000663

108633823
type: Gene
SIO_000068: ncbigene

position:1437497:-1
position: 1437497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437568:-1
position: 1437568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1437497-1437568:-1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1437533..1437535),aa:Cys, seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: complement(1437497..1437568)
location: region:1437497-1437568:-1
so has part: feature:1437497-1437568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1437497-1437568:-1:exon

LOC108633762
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108633762
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1957108..1960462)
location: region:1957108-1960462:-1
so has part: feature:1957108-1960462:-1:exon

108633762
type: Gene
SIO_000068: ncbigene

position:1957108:-1
position: 1957108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1960462:-1
position: 1960462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1957108-1960462:-1:exon

LOC108633762
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633762
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC108633762
subclass of: SO_0000673
so part of: LOC108633762
location: complement(1957108..1957232)
location: region:1957108-1957232:-1
so has part: feature:1957108-1957232:-1:exon

position:1957232:-1
position: 1957232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1957108-1957232:-1:exon

LOC108633762
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633762
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC108633762
subclass of: SO_0000673
so part of: LOC108633762
location: complement(1957368..1958133)
location: region:1957368-1958133:-1
so has part: feature:1957368-1958133:-1:exon

position:1957368:-1
position: 1957368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1958133:-1
position: 1958133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1957368-1958133:-1:exon

LOC108633762
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633762
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC108633762
subclass of: SO_0000673
so part of: LOC108633762
location: complement(1958199..1960462)
location: region:1958199-1960462:-1
so has part: feature:1958199-1960462:-1:exon

position:1958199:-1
position: 1958199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1958199-1960462:-1:exon

LOC102178030
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102178030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2008055..2113319
location: region:2008055-2113319:1
so has part: feature:2008055-2113319:1:exon

102178030
type: Gene
SIO_000068: ncbigene

position:2008055:1
position: 2008055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2113319:1
position: 2113319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2008055-2113319:1:exon

LOC102178030
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102178030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC102178030
subclass of: SO_0000673
so part of: LOC102178030
location: 2008055..2008395
location: region:2008055-2008395:1
so has part: feature:2008055-2008395:1:exon

position:2008395:1
position: 2008395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2008055-2008395:1:exon

LOC102178030
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102178030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC102178030
subclass of: SO_0000673
so part of: LOC102178030
location: 2008506..2008532
location: region:2008506-2008532:1
so has part: feature:2008506-2008532:1:exon

position:2008506:1
position: 2008506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2008532:1
position: 2008532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2008506-2008532:1:exon

LOC102178030
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102178030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC102178030
subclass of: SO_0000673
so part of: LOC102178030
location: 2008805..2009146
location: region:2008805-2009146:1
so has part: feature:2008805-2009146:1:exon

position:2008805:1
position: 2008805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2009146:1
position: 2009146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2008805-2009146:1:exon

LOC102178030
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102178030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC102178030
subclass of: SO_0000673
so part of: LOC102178030
location: 2113181..2113319
location: region:2113181-2113319:1
so has part: feature:2113181-2113319:1:exon

position:2113181:1
position: 2113181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2113181-2113319:1:exon

GALR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: GALR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2157218..2168903)
location: region:2157218-2168903:-1
so has part: feature:2157218-2168903:-1:exon
subclass of: SO_0000010

102178322
type: Gene
SIO_000068: ncbigene

position:2157218:-1
position: 2157218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2168903:-1
position: 2168903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2157218-2168903:-1:exon

GALR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: GALR1
product: galanin receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 7 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018039351.1
SIO_010081: GALR1
subclass of: SO_0000673
so part of: GALR1
location: complement(join(2157218..2157802,2163472..2163537,2167944..2168903))
location: region:2157218-2168903:-1
so has part: feature:2167944-2168903:-1:exon
so has part: feature:2163472-2163537:-1:exon
so has part: feature:2157218-2157802:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2167944-2168903:-1:exon

position:2167944:-1
position: 2167944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2163472-2163537:-1:exon

position:2163472:-1
position: 2163472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2163537:-1
position: 2163537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2157218-2157802:-1:exon

position:2157802:-1
position: 2157802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GALR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: GALR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galanin receptor type 1
translation: MELEVGNFSERNASGLEPPTSEPRPLFGIGVENFVTLVVFGLIFALGVLGNSLVITVLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYALPTWVLGAFICKFVHYFFTVSMLVSIFTLAAMSVDRYVAIVHSRRSSALRVSRNALLGVGFIWALAIVTASPVAYHQRLFHRDASNQTFCWEQWPNQRHKKAYVVCTFVFGYLLPLLLICFCYAKVLNHLHKKLKNVSKKSEASKKKTAQTVLVVVVVFGVSWLPHHVIHLWAEFGVFPLTPASFFFRITAHCLAYSNSSVNPIIYAFLSENFRKAYKQVFKCQARKESPLNDTKENKSRLDTPPSTNCTHV
SIO_010081: GALR1
subclass of: SO_0000673
so part of: GALR1
location: complement(join(2157485..2157802,2163472..2163537,2167944..2168609))
location: region:2157485-2168609:-1
so has part: feature:2167944-2168609:-1:exon
so has part: feature:2163472-2163537:-1:exon
so has part: feature:2157485-2157802:-1:exon

XP_017894840.1
type: Protein
SIO_000068: ncbiprotein

position:2157485:-1
position: 2157485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2168609:-1
position: 2168609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2167944-2168609:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2163472-2163537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2157485-2157802:-1:exon

MBP
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2237320..2346019
location: region:2237320-2346019:1
so has part: feature:2237320-2346019:1:exon
subclass of: SO_0000010

106503529
type: Gene
SIO_000068: ncbigene

position:2237320:1
position: 2237320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2346019:1
position: 2346019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2237320-2346019:1:exon

MBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: MBP
product: myelin basic protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1137 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018039439.1
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2237320..2237407,2262724..2262797,2283644..2283731,2311935..2312365,2334790..2334897,2335866..2335901,2336275..2336307,2340062..2340181,2344692..2346019)
location: region:2237320-2346019:1
so has part: feature:2237320-2237407:1:exon
so has part: feature:2262724-2262797:1:exon
so has part: feature:2283644-2283731:1:exon
so has part: feature:2311935-2312365:1:exon
so has part: feature:2334790-2334897:1:exon
so has part: feature:2335866-2335901:1:exon
so has part: feature:2336275-2336307:1:exon
so has part: feature:2340062-2340181:1:exon
so has part: feature:2344692-2346019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2237320-2237407:1:exon

position:2237407:1
position: 2237407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2262724-2262797:1:exon

position:2262724:1
position: 2262724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2262797:1
position: 2262797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2283644-2283731:1:exon

position:2283644:1
position: 2283644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2283731:1
position: 2283731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2311935-2312365:1:exon

position:2311935:1
position: 2311935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2312365:1
position: 2312365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2334790-2334897:1:exon

position:2334790:1
position: 2334790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334897:1
position: 2334897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2335866-2335901:1:exon

position:2335866:1
position: 2335866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2335901:1
position: 2335901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2336275-2336307:1:exon

position:2336275:1
position: 2336275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2336307:1
position: 2336307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2340062-2340181:1:exon

position:2340062:1
position: 2340062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340181:1
position: 2340181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2344692-2346019:1:exon

position:2344692:1
position: 2344692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: MBP
product: myelin basic protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1139 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_018039438.1
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2237391..2237407,2262724..2262797,2283644..2283731,2311935..2312365,2318722..2318799,2334790..2334897,2335866..2335901,2336275..2336307,2340062..2340181,2344692..2346019)
location: region:2237391-2346019:1
so has part: feature:2237391-2237407:1:exon
so has part: feature:2262724-2262797:1:exon
so has part: feature:2283644-2283731:1:exon
so has part: feature:2311935-2312365:1:exon
so has part: feature:2318722-2318799:1:exon
so has part: feature:2334790-2334897:1:exon
so has part: feature:2335866-2335901:1:exon
so has part: feature:2336275-2336307:1:exon
so has part: feature:2340062-2340181:1:exon
so has part: feature:2344692-2346019:1:exon

position:2237391:1
position: 2237391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2237391-2237407:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2262724-2262797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2283644-2283731:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2311935-2312365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2318722-2318799:1:exon

position:2318722:1
position: 2318722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2318799:1
position: 2318799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2334790-2334897:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2335866-2335901:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2336275-2336307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2340062-2340181:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2344692-2346019:1:exon

MBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X1
translation: MGNHAGKRDFGAEKGNKDSETNRGEYEKKRNTRDLSREISEDSDVFGAADVVPNNGAPSQGAAVTDSKRTADPKNAWPEASPADPGGRPHLVRLFSRDAPGREDNTFKDRPSESDELQTIQEDSAAAPGAVDAMAAQKRPSQRSKYLASASTMDHARHGFLPRHRDTGILDSLGRFFGSDRGAPKRGSGKVPWLKQSKSPLGPHARSPPGLCNMYQDGHHAARTTHYGSLPQKAQHGRPQDENPVVHFFKNIVTPRTPPPSQGKGRGLSLSRFSWGAEGQKPGFGYGGRASDYKSAHKGLKGHDAQGTLSRIFKLGGRDSRSGSPMARR
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2262747..2262797,2283644..2283731,2311935..2312365,2318722..2318799,2334790..2334897,2335866..2335901,2336275..2336307,2340062..2340181,2344692..2344736)
location: region:2262747-2344736:1
so has part: feature:2262747-2262797:1:exon
so has part: feature:2283644-2283731:1:exon
so has part: feature:2311935-2312365:1:exon
so has part: feature:2318722-2318799:1:exon
so has part: feature:2334790-2334897:1:exon
so has part: feature:2335866-2335901:1:exon
so has part: feature:2336275-2336307:1:exon
so has part: feature:2340062-2340181:1:exon
so has part: feature:2344692-2344736:1:exon

XP_017894927.1
type: Protein
SIO_000068: ncbiprotein

position:2262747:1
position: 2262747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2344736:1
position: 2344736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2262747-2262797:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2283644-2283731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2311935-2312365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2318722-2318799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2334790-2334897:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2335866-2335901:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2336275-2336307:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2340062-2340181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2344692-2344736:1:exon

MBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X2
translation: MGNHAGKRDFGAEKGNKDSETNRGEYEKKRNTRDLSREISEDSDVFGAADVVPNNGAPSQGAAVTDSKRTADPKNAWPEASPADPGGRPHLVRLFSRDAPGREDNTFKDRPSESDELQTIQEDSAAAPGAVDAMAAQKRPSQRSKYLASASTMDHARHGFLPRHRDTGILDSLGRFFGSDRGAPKRGSGKDGHHAARTTHYGSLPQKAQHGRPQDENPVVHFFKNIVTPRTPPPSQGKGRGLSLSRFSWGAEGQKPGFGYGGRASDYKSAHKGLKGHDAQGTLSRIFKLGGRDSRSGSPMARR
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2262747..2262797,2283644..2283731,2311935..2312365,2334790..2334897,2335866..2335901,2336275..2336307,2340062..2340181,2344692..2344736)
location: region:2262747-2344736:1
so has part: feature:2262747-2262797:1:exon
so has part: feature:2283644-2283731:1:exon
so has part: feature:2311935-2312365:1:exon
so has part: feature:2334790-2334897:1:exon
so has part: feature:2335866-2335901:1:exon
so has part: feature:2336275-2336307:1:exon
so has part: feature:2340062-2340181:1:exon
so has part: feature:2344692-2344736:1:exon

XP_017894928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2262747-2262797:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2283644-2283731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2311935-2312365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2334790-2334897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2335866-2335901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2336275-2336307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2340062-2340181:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2344692-2344736:1:exon

ZNF236
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2351892..2421705)
location: region:2351892-2421705:-1
so has part: feature:2351892-2421705:-1:exon
subclass of: SO_0000010

102178589
type: Gene
SIO_000068: ncbigene

position:2351892:-1
position: 2351892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2421705:-1
position: 2421705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2351892-2421705:-1:exon

ZNF236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZNF236
product: zinc finger protein 236, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018039622.1
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2351892..2354374,2355132..2355308,2359678..2359807,2361407..2361604,2363243..2363371,2365406..2365593,2370799..2370954,2373722..2373901,2374295..2374535,2374625..2374770,2375738..2376103,2376643..2376746,2378211..2378493,2380110..2380322,2381065..2381216,2383967..2384070,2385440..2385591,2386184..2386285,2386940..2387193,2388380..2388640,2389361..2389502,2392164..2392367,2393026..2393298,2399338..2399566,2400516..2400719,2402330..2402473,2404585..2404757,2405059..2405183,2405859..2406037,2410522..2410686,2411856..2411998,2421580..2421705))
location: region:2351892-2421705:-1
so has part: feature:2421580-2421705:-1:exon
so has part: feature:2411856-2411998:-1:exon
so has part: feature:2410522-2410686:-1:exon
so has part: feature:2405859-2406037:-1:exon
so has part: feature:2405059-2405183:-1:exon
so has part: feature:2404585-2404757:-1:exon
so has part: feature:2402330-2402473:-1:exon
so has part: feature:2400516-2400719:-1:exon
so has part: feature:2399338-2399566:-1:exon
so has part: feature:2393026-2393298:-1:exon
so has part: feature:2392164-2392367:-1:exon
so has part: feature:2389361-2389502:-1:exon
so has part: feature:2388380-2388640:-1:exon
so has part: feature:2386940-2387193:-1:exon
so has part: feature:2386184-2386285:-1:exon
so has part: feature:2385440-2385591:-1:exon
so has part: feature:2383967-2384070:-1:exon
so has part: feature:2381065-2381216:-1:exon
so has part: feature:2380110-2380322:-1:exon
so has part: feature:2378211-2378493:-1:exon
so has part: feature:2376643-2376746:-1:exon
so has part: feature:2375738-2376103:-1:exon
so has part: feature:2374625-2374770:-1:exon
so has part: feature:2374295-2374535:-1:exon
so has part: feature:2373722-2373901:-1:exon
so has part: feature:2370799-2370954:-1:exon
so has part: feature:2365406-2365593:-1:exon
so has part: feature:2363243-2363371:-1:exon
so has part: feature:2361407-2361604:-1:exon
so has part: feature:2359678-2359807:-1:exon
so has part: feature:2355132-2355308:-1:exon
so has part: feature:2351892-2354374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2421580-2421705:-1:exon

position:2421580:-1
position: 2421580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2411856-2411998:-1:exon

position:2411856:-1
position: 2411856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2411998:-1
position: 2411998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2410522-2410686:-1:exon

position:2410522:-1
position: 2410522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2410686:-1
position: 2410686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2405859-2406037:-1:exon

position:2405859:-1
position: 2405859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2406037:-1
position: 2406037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2405059-2405183:-1:exon

position:2405059:-1
position: 2405059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2405183:-1
position: 2405183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2404585-2404757:-1:exon

position:2404585:-1
position: 2404585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2404757:-1
position: 2404757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2402330-2402473:-1:exon

position:2402330:-1
position: 2402330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2402473:-1
position: 2402473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2400516-2400719:-1:exon

position:2400516:-1
position: 2400516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2400719:-1
position: 2400719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2399338-2399566:-1:exon

position:2399338:-1
position: 2399338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2399566:-1
position: 2399566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2393026-2393298:-1:exon

position:2393026:-1
position: 2393026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393298:-1
position: 2393298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2392164-2392367:-1:exon

position:2392164:-1
position: 2392164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392367:-1
position: 2392367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2389361-2389502:-1:exon

position:2389361:-1
position: 2389361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2389502:-1
position: 2389502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2388380-2388640:-1:exon

position:2388380:-1
position: 2388380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2388640:-1
position: 2388640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2386940-2387193:-1:exon

position:2386940:-1
position: 2386940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2387193:-1
position: 2387193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2386184-2386285:-1:exon

position:2386184:-1
position: 2386184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2386285:-1
position: 2386285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2385440-2385591:-1:exon

position:2385440:-1
position: 2385440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2385591:-1
position: 2385591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2383967-2384070:-1:exon

position:2383967:-1
position: 2383967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2384070:-1
position: 2384070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2381065-2381216:-1:exon

position:2381065:-1
position: 2381065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2381216:-1
position: 2381216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2380110-2380322:-1:exon

position:2380110:-1
position: 2380110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2380322:-1
position: 2380322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2378211-2378493:-1:exon

position:2378211:-1
position: 2378211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2378493:-1
position: 2378493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2376643-2376746:-1:exon

position:2376643:-1
position: 2376643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2376746:-1
position: 2376746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2375738-2376103:-1:exon

position:2375738:-1
position: 2375738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2376103:-1
position: 2376103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2374625-2374770:-1:exon

position:2374625:-1
position: 2374625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2374770:-1
position: 2374770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2374295-2374535:-1:exon

position:2374295:-1
position: 2374295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2374535:-1
position: 2374535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2373722-2373901:-1:exon

position:2373722:-1
position: 2373722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2373901:-1
position: 2373901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2370799-2370954:-1:exon

position:2370799:-1
position: 2370799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2370954:-1
position: 2370954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2365406-2365593:-1:exon

position:2365406:-1
position: 2365406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2365593:-1
position: 2365593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2363243-2363371:-1:exon

position:2363243:-1
position: 2363243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2363371:-1
position: 2363371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2361407-2361604:-1:exon

position:2361407:-1
position: 2361407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2361604:-1
position: 2361604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2359678-2359807:-1:exon

position:2359678:-1
position: 2359678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2359807:-1
position: 2359807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2355132-2355308:-1:exon

position:2355132:-1
position: 2355132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2355308:-1
position: 2355308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2351892-2354374:-1:exon

position:2354374:-1
position: 2354374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZNF236
product: zinc finger protein 236, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018039621.1
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2351892..2354374,2355132..2355308,2359678..2359807,2361407..2361604,2363243..2363371,2365406..2365593,2370799..2370954,2373291..2373332,2373722..2373901,2374295..2374535,2374625..2374770,2375738..2376103,2376643..2376746,2378211..2378493,2380110..2380322,2381065..2381216,2383967..2384070,2385440..2385591,2386184..2386285,2386940..2387193,2388380..2388640,2389361..2389502,2392164..2392367,2393026..2393298,2399338..2399566,2400516..2400719,2402330..2402473,2404585..2404757,2405059..2405183,2405859..2406037,2410522..2410686,2411856..2411998,2421580..2421705))
location: region:2351892-2421705:-1
so has part: feature:2421580-2421705:-1:exon
so has part: feature:2411856-2411998:-1:exon
so has part: feature:2410522-2410686:-1:exon
so has part: feature:2405859-2406037:-1:exon
so has part: feature:2405059-2405183:-1:exon
so has part: feature:2404585-2404757:-1:exon
so has part: feature:2402330-2402473:-1:exon
so has part: feature:2400516-2400719:-1:exon
so has part: feature:2399338-2399566:-1:exon
so has part: feature:2393026-2393298:-1:exon
so has part: feature:2392164-2392367:-1:exon
so has part: feature:2389361-2389502:-1:exon
so has part: feature:2388380-2388640:-1:exon
so has part: feature:2386940-2387193:-1:exon
so has part: feature:2386184-2386285:-1:exon
so has part: feature:2385440-2385591:-1:exon
so has part: feature:2383967-2384070:-1:exon
so has part: feature:2381065-2381216:-1:exon
so has part: feature:2380110-2380322:-1:exon
so has part: feature:2378211-2378493:-1:exon
so has part: feature:2376643-2376746:-1:exon
so has part: feature:2375738-2376103:-1:exon
so has part: feature:2374625-2374770:-1:exon
so has part: feature:2374295-2374535:-1:exon
so has part: feature:2373722-2373901:-1:exon
so has part: feature:2373291-2373332:-1:exon
so has part: feature:2370799-2370954:-1:exon
so has part: feature:2365406-2365593:-1:exon
so has part: feature:2363243-2363371:-1:exon
so has part: feature:2361407-2361604:-1:exon
so has part: feature:2359678-2359807:-1:exon
so has part: feature:2355132-2355308:-1:exon
so has part: feature:2351892-2354374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2421580-2421705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2411856-2411998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2410522-2410686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2405859-2406037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2405059-2405183:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2404585-2404757:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2402330-2402473:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2400516-2400719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2399338-2399566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2393026-2393298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2392164-2392367:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2389361-2389502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2388380-2388640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2386940-2387193:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2386184-2386285:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2385440-2385591:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2383967-2384070:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2381065-2381216:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2380110-2380322:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2378211-2378493:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2376643-2376746:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2375738-2376103:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2374625-2374770:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2374295-2374535:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2373722-2373901:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2373291-2373332:-1:exon

position:2373291:-1
position: 2373291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2373332:-1
position: 2373332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2370799-2370954:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2365406-2365593:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2363243-2363371:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2361407-2361604:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2359678-2359807:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2355132-2355308:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2351892-2354374:-1:exon

ZNF236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 236 isoform X2
translation: MPRGRPPKPKESKARGDTDGVLTLNAENTNYDYQVPNFHKCEICLLSFPKESQFQRHMRDHERNDKPHRCDQCPQTFNVEFNLTLHKCTHNGEDPTCPVCNKKFSRVASLKAHVMLHEKEENLICSECGDEFTLQSQLAIHMEEHRQELAGSRSHTCKACRKEFETSSQLKEHMKTHYKIRVAGTRPYSRNIDRSGFTYPCPHCGKTFQKPSQLTRHVRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSAGATETAHVLTATLFQTLPLQQTDAQVPSAPGQQSSQVVTDVIQQLLELSEPGPVEASQPPQAAQQLSITVGINQDILQQALENSGLSSIPVAAHPSDPSHTKAAAAQGQTPDATSISSEPADPTDTEQEKEQESPEKLDKKEKKIIKKKSPFLPGSIREENGVRWHVCPCCAKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHVASHFKHTELRKMRHQRKPAKVRVGKANVPVPDIPLQEPILITDVGLIQPIPRNQLFQSYFNNNFVNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQHQQASSMDDGTVGQQRMHASTPMQVEVESEALQPSAEAAAANPGAMLELGPPHGVSAEEAGLGPQMAGQPLEAEEDRFVAPQQALQGHVDQLHEQAPPQQSFEPAGLSQGFTVTDTYSQQTPFPPVQQLQDSSTLESQALSTSFHQQNLLPVPGTDTINVTTRLIQESPQEEMDLQPPRPPFLEEAEEQSRRSYRCDYCSKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSVCSTAFTTNGSLTRHMATHVSAKPYRCPFCEQGFRTTVHCKKHMKTHQAAASGGSAPGDADGGEMGLEEEEDGSERSTSRKARPEVITFTEEETAQLAKIPPQESATVSEQVLVQSAAEKDRISEMKDRQAELEAEPKHANCCSYCPKSFKKPSDLVRHVRIHTGEKPYRCEECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQFHYKPDPKKARKPAPRAAAEGPQPVSAAPAPSADPGVFIMNSPVLTGQLDQSLLQPGLLGQAVLPASVSAGGDWTVSLTDGSLATLEGIQLQLAANLVGPNVQISGIDASTVSNITLQIDPSVLQQTLQQGGLLAQQLTAEPGLAPQGGSLQTPDSAVPASVVLQPIPGLALQPTVTSANLAMGPLSEQDSALATSSSGTQDLSQVMTSQGLVSTSGGPHEITLTINNSSLSQVLAQAAGPAAATSSGPPQEITLTISGQDLIQHSSNGSSELNGSIRLSAPTINNQSTGATLTISNDQLLSQSATLNSSELNATAGSLPPTTPLSPSAVSAQSLVMSSSAVGTEASVTLTLADTQGLLSGGLDTVTLNIASQGQQFPALLTDPSLSGAGGAGSPQVILVSPPAQPSSACEEITYQVTDVSASLAPGGAPEKEARLHACLECGCSFTSAGLLLQHSKAAHGRERIHICPVCRKAFKRATHLKEHMQTHQAGPSLSSQKPRVFKCDTCEKAFAKPSQLERHSRIHTGERPFHCTLCEKAFNQKSALQVHMKKHTGERPYKCDYCVMGFTQKSNMKLHMKRAHSYAAGAVPEPVGQQDHGAEALSHALHLDEVVPEPASEWQALANVF
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2354247..2354374,2355132..2355308,2359678..2359807,2361407..2361604,2363243..2363371,2365406..2365593,2370799..2370954,2373722..2373901,2374295..2374535,2374625..2374770,2375738..2376103,2376643..2376746,2378211..2378493,2380110..2380322,2381065..2381216,2383967..2384070,2385440..2385591,2386184..2386285,2386940..2387193,2388380..2388640,2389361..2389502,2392164..2392367,2393026..2393298,2399338..2399566,2400516..2400719,2402330..2402473,2404585..2404757,2405059..2405183,2405859..2406037,2410522..2410686,2411856..2411998,2421580..2421634))
location: region:2354247-2421634:-1
so has part: feature:2421580-2421634:-1:exon
so has part: feature:2411856-2411998:-1:exon
so has part: feature:2410522-2410686:-1:exon
so has part: feature:2405859-2406037:-1:exon
so has part: feature:2405059-2405183:-1:exon
so has part: feature:2404585-2404757:-1:exon
so has part: feature:2402330-2402473:-1:exon
so has part: feature:2400516-2400719:-1:exon
so has part: feature:2399338-2399566:-1:exon
so has part: feature:2393026-2393298:-1:exon
so has part: feature:2392164-2392367:-1:exon
so has part: feature:2389361-2389502:-1:exon
so has part: feature:2388380-2388640:-1:exon
so has part: feature:2386940-2387193:-1:exon
so has part: feature:2386184-2386285:-1:exon
so has part: feature:2385440-2385591:-1:exon
so has part: feature:2383967-2384070:-1:exon
so has part: feature:2381065-2381216:-1:exon
so has part: feature:2380110-2380322:-1:exon
so has part: feature:2378211-2378493:-1:exon
so has part: feature:2376643-2376746:-1:exon
so has part: feature:2375738-2376103:-1:exon
so has part: feature:2374625-2374770:-1:exon
so has part: feature:2374295-2374535:-1:exon
so has part: feature:2373722-2373901:-1:exon
so has part: feature:2370799-2370954:-1:exon
so has part: feature:2365406-2365593:-1:exon
so has part: feature:2363243-2363371:-1:exon
so has part: feature:2361407-2361604:-1:exon
so has part: feature:2359678-2359807:-1:exon
so has part: feature:2355132-2355308:-1:exon
so has part: feature:2354247-2354374:-1:exon

XP_017895111.1
type: Protein
SIO_000068: ncbiprotein

position:2354247:-1
position: 2354247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2421634:-1
position: 2421634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2421580-2421634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2411856-2411998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2410522-2410686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2405859-2406037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2405059-2405183:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2404585-2404757:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2402330-2402473:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2400516-2400719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2399338-2399566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2393026-2393298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2392164-2392367:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2389361-2389502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2388380-2388640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2386940-2387193:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2386184-2386285:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2385440-2385591:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2383967-2384070:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2381065-2381216:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2380110-2380322:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2378211-2378493:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2376643-2376746:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2375738-2376103:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2374625-2374770:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2374295-2374535:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2373722-2373901:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2370799-2370954:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2365406-2365593:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2363243-2363371:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2361407-2361604:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2359678-2359807:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2355132-2355308:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2354247-2354374:-1:exon

ZNF236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 236 isoform X1
translation: MPRGRPPKPKESKARGDTDGVLTLNAENTNYDYQVPNFHKCEICLLSFPKESQFQRHMRDHERNDKPHRCDQCPQTFNVEFNLTLHKCTHNGEDPTCPVCNKKFSRVASLKAHVMLHEKEENLICSECGDEFTLQSQLAIHMEEHRQELAGSRSHTCKACRKEFETSSQLKEHMKTHYKIRVAGTRPYSRNIDRSGFTYPCPHCGKTFQKPSQLTRHVRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSAGATETAHVLTATLFQTLPLQQTDAQVPSAPGQQSSQVVTDVIQQLLELSEPGPVEASQPPQAAQQLSITVGINQDILQQALENSGLSSIPVAAHPSDPSHTKAAAAQGQTPDATSISSEPADPTDTEQEKEQESPEKLDKKEKKIIKKKSPFLPGSIREENGVRWHVCPCCAKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHVASHFKHTELRKMRHQRKPAKVRVGKANVPVPDIPLQEPILITDVGLIQPIPRNQLFQSYFNNNFVNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQHQQASSMDDGTVGQQRMHASTPMQVEVESEALQPSAEAAAANPGAMLELGPPHGVSAEEAGLGPQMAGQPLEAEEDRFVAPQQALQGHVDQLHEQAPPQQSFEPAGLSQGFTVTDTYSQQTPFPPVQQLQDSSTLESQALSTSFHQQNLLPVPGTDTINVTTRLIQESPQEEMDLQPPRPPFLEEAEEQSRRSYRCDYCSKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSVCSTAFTTNGSLTRHMATHVSAKPYRCPFCEQGFRTTVHCKKHMKTHQAAASGGSAPGDADGGEMGLEEEEDGSERSTSRKARPEVITFTEEETAQLAKIPPQESATVSEQVLVQSAAEKDRISEMKDRQAELEAEPKHANCCSYCPKSFKKPSDLVRHVRIHTGEKPYRCEECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQFHYKPDPKKARKPAPRAAAEGPQPVSAAPAPSADPGVFIMNSPVLTGQLDQSLLQPGLLGQAVLPASVSAGGDWTVSLTDGSLATLEGIQLQLAANLVGPNVQISGIDASTVSNITLQIDPSVLQQTLQQGGLLAQQLTAEPGLAPQGGSLQTPDSAVPASVVLQPIPGLALQPTVTSANLAMGPLSEQDSALATSSSGTQDLSQVMTSQGLVSTSGGPHEITLTINNSSLSQVLAQAAGPAAATSSGPPQEITLTISEFFSDHVENNDRKIGQDLIQHSSNGSSELNGSIRLSAPTINNQSTGATLTISNDQLLSQSATLNSSELNATAGSLPPTTPLSPSAVSAQSLVMSSSAVGTEASVTLTLADTQGLLSGGLDTVTLNIASQGQQFPALLTDPSLSGAGGAGSPQVILVSPPAQPSSACEEITYQVTDVSASLAPGGAPEKEARLHACLECGCSFTSAGLLLQHSKAAHGRERIHICPVCRKAFKRATHLKEHMQTHQAGPSLSSQKPRVFKCDTCEKAFAKPSQLERHSRIHTGERPFHCTLCEKAFNQKSALQVHMKKHTGERPYKCDYCVMGFTQKSNMKLHMKRAHSYAAGAVPEPVGQQDHGAEALSHALHLDEVVPEPASEWQALANVF
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2354247..2354374,2355132..2355308,2359678..2359807,2361407..2361604,2363243..2363371,2365406..2365593,2370799..2370954,2373291..2373332,2373722..2373901,2374295..2374535,2374625..2374770,2375738..2376103,2376643..2376746,2378211..2378493,2380110..2380322,2381065..2381216,2383967..2384070,2385440..2385591,2386184..2386285,2386940..2387193,2388380..2388640,2389361..2389502,2392164..2392367,2393026..2393298,2399338..2399566,2400516..2400719,2402330..2402473,2404585..2404757,2405059..2405183,2405859..2406037,2410522..2410686,2411856..2411998,2421580..2421634))
location: region:2354247-2421634:-1
so has part: feature:2421580-2421634:-1:exon
so has part: feature:2411856-2411998:-1:exon
so has part: feature:2410522-2410686:-1:exon
so has part: feature:2405859-2406037:-1:exon
so has part: feature:2405059-2405183:-1:exon
so has part: feature:2404585-2404757:-1:exon
so has part: feature:2402330-2402473:-1:exon
so has part: feature:2400516-2400719:-1:exon
so has part: feature:2399338-2399566:-1:exon
so has part: feature:2393026-2393298:-1:exon
so has part: feature:2392164-2392367:-1:exon
so has part: feature:2389361-2389502:-1:exon
so has part: feature:2388380-2388640:-1:exon
so has part: feature:2386940-2387193:-1:exon
so has part: feature:2386184-2386285:-1:exon
so has part: feature:2385440-2385591:-1:exon
so has part: feature:2383967-2384070:-1:exon
so has part: feature:2381065-2381216:-1:exon
so has part: feature:2380110-2380322:-1:exon
so has part: feature:2378211-2378493:-1:exon
so has part: feature:2376643-2376746:-1:exon
so has part: feature:2375738-2376103:-1:exon
so has part: feature:2374625-2374770:-1:exon
so has part: feature:2374295-2374535:-1:exon
so has part: feature:2373722-2373901:-1:exon
so has part: feature:2373291-2373332:-1:exon
so has part: feature:2370799-2370954:-1:exon
so has part: feature:2365406-2365593:-1:exon
so has part: feature:2363243-2363371:-1:exon
so has part: feature:2361407-2361604:-1:exon
so has part: feature:2359678-2359807:-1:exon
so has part: feature:2355132-2355308:-1:exon
so has part: feature:2354247-2354374:-1:exon

XP_017895110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2421580-2421634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2411856-2411998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2410522-2410686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2405859-2406037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2405059-2405183:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2404585-2404757:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2402330-2402473:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2400516-2400719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2399338-2399566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2393026-2393298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2392164-2392367:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2389361-2389502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2388380-2388640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2386940-2387193:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2386184-2386285:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2385440-2385591:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2383967-2384070:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2381065-2381216:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2380110-2380322:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2378211-2378493:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2376643-2376746:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2375738-2376103:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2374625-2374770:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2374295-2374535:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2373722-2373901:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2373291-2373332:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2370799-2370954:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2365406-2365593:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2363243-2363371:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2361407-2361604:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2359678-2359807:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2355132-2355308:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2354247-2354374:-1:exon

ZNF236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZNF236
product: zinc finger protein 236, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018039623.1
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2365505..2365593,2366564..2366630,2370799..2370954,2373291..2373332,2373722..2373901,2374295..2374535,2374625..2374770,2375738..2376103,2376643..2376746,2378211..2378493,2380110..2380322,2381065..2381216,2383967..2384070,2385440..2385591,2386184..2386285,2386940..2387193,2388380..2388640,2389361..2389502,2392164..2392367,2393026..2393298,2399338..2399566,2400516..2400719,2402330..2402473,2404585..2404757,2405059..2405183,2405859..2406037,2410522..2410686,2411856..2411998,2421580..2421705))
location: region:2365505-2421705:-1
so has part: feature:2421580-2421705:-1:exon
so has part: feature:2411856-2411998:-1:exon
so has part: feature:2410522-2410686:-1:exon
so has part: feature:2405859-2406037:-1:exon
so has part: feature:2405059-2405183:-1:exon
so has part: feature:2404585-2404757:-1:exon
so has part: feature:2402330-2402473:-1:exon
so has part: feature:2400516-2400719:-1:exon
so has part: feature:2399338-2399566:-1:exon
so has part: feature:2393026-2393298:-1:exon
so has part: feature:2392164-2392367:-1:exon
so has part: feature:2389361-2389502:-1:exon
so has part: feature:2388380-2388640:-1:exon
so has part: feature:2386940-2387193:-1:exon
so has part: feature:2386184-2386285:-1:exon
so has part: feature:2385440-2385591:-1:exon
so has part: feature:2383967-2384070:-1:exon
so has part: feature:2381065-2381216:-1:exon
so has part: feature:2380110-2380322:-1:exon
so has part: feature:2378211-2378493:-1:exon
so has part: feature:2376643-2376746:-1:exon
so has part: feature:2375738-2376103:-1:exon
so has part: feature:2374625-2374770:-1:exon
so has part: feature:2374295-2374535:-1:exon
so has part: feature:2373722-2373901:-1:exon
so has part: feature:2373291-2373332:-1:exon
so has part: feature:2370799-2370954:-1:exon
so has part: feature:2366564-2366630:-1:exon
so has part: feature:2365505-2365593:-1:exon

position:2365505:-1
position: 2365505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2421580-2421705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2411856-2411998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2410522-2410686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2405859-2406037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2405059-2405183:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2404585-2404757:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2402330-2402473:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2400516-2400719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2399338-2399566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2393026-2393298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2392164-2392367:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2389361-2389502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2388380-2388640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2386940-2387193:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2386184-2386285:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2385440-2385591:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2383967-2384070:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2381065-2381216:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2380110-2380322:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2378211-2378493:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2376643-2376746:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2375738-2376103:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2374625-2374770:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2374295-2374535:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2373722-2373901:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2373291-2373332:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2370799-2370954:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2366564-2366630:-1:exon

position:2366564:-1
position: 2366564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2366630:-1
position: 2366630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2365505-2365593:-1:exon

ZNF236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 236 isoform X3
translation: MPRGRPPKPKESKARGDTDGVLTLNAENTNYDYQVPNFHKCEICLLSFPKESQFQRHMRDHERNDKPHRCDQCPQTFNVEFNLTLHKCTHNGEDPTCPVCNKKFSRVASLKAHVMLHEKEENLICSECGDEFTLQSQLAIHMEEHRQELAGSRSHTCKACRKEFETSSQLKEHMKTHYKIRVAGTRPYSRNIDRSGFTYPCPHCGKTFQKPSQLTRHVRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSAGATETAHVLTATLFQTLPLQQTDAQVPSAPGQQSSQVVTDVIQQLLELSEPGPVEASQPPQAAQQLSITVGINQDILQQALENSGLSSIPVAAHPSDPSHTKAAAAQGQTPDATSISSEPADPTDTEQEKEQESPEKLDKKEKKIIKKKSPFLPGSIREENGVRWHVCPCCAKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHVASHFKHTELRKMRHQRKPAKVRVGKANVPVPDIPLQEPILITDVGLIQPIPRNQLFQSYFNNNFVNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQHQQASSMDDGTVGQQRMHASTPMQVEVESEALQPSAEAAAANPGAMLELGPPHGVSAEEAGLGPQMAGQPLEAEEDRFVAPQQALQGHVDQLHEQAPPQQSFEPAGLSQGFTVTDTYSQQTPFPPVQQLQDSSTLESQALSTSFHQQNLLPVPGTDTINVTTRLIQESPQEEMDLQPPRPPFLEEAEEQSRRSYRCDYCSKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSVCSTAFTTNGSLTRHMATHVSAKPYRCPFCEQGFRTTVHCKKHMKTHQAAASGGSAPGDADGGEMGLEEEEDGSERSTSRKARPEVITFTEEETAQLAKIPPQESATVSEQVLVQSAAEKDRISEMKDRQAELEAEPKHANCCSYCPKSFKKPSDLVRHVRIHTGEKPYRCEECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQFHYKPDPKKARKPAPRAAAEGPQPVSAAPAPSADPGVFIMNSPVLTGQLDQSLLQPGLLGQAVLPASVSAGGDWTVSLTDGSLATLEGIQLQLAANLVGPNVQISGIDASTVSNITLQIDPSVLQQTLQQGGLLAQQLTAEPGLAPQGGSLQTPDSAVPASVVLQPIPGLALQPTVTSANLAMGPLSEQDSALATSSSGTQDLSQVMTSQGLVSTSGGPHEITLTINNSSLSQVLAQAAGPAAATSSGPPQEITLTISEFFSDHVENNDRKIGQDLIQHSSNGSSELNGSIRLSAPTINNQSTGATLTISNDQLLSQSATLNSSGSRSARHSVRVRECGSVEDAGHKT
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2365587..2365593,2366564..2366630,2370799..2370954,2373291..2373332,2373722..2373901,2374295..2374535,2374625..2374770,2375738..2376103,2376643..2376746,2378211..2378493,2380110..2380322,2381065..2381216,2383967..2384070,2385440..2385591,2386184..2386285,2386940..2387193,2388380..2388640,2389361..2389502,2392164..2392367,2393026..2393298,2399338..2399566,2400516..2400719,2402330..2402473,2404585..2404757,2405059..2405183,2405859..2406037,2410522..2410686,2411856..2411998,2421580..2421634))
location: region:2365587-2421634:-1
so has part: feature:2421580-2421634:-1:exon
so has part: feature:2411856-2411998:-1:exon
so has part: feature:2410522-2410686:-1:exon
so has part: feature:2405859-2406037:-1:exon
so has part: feature:2405059-2405183:-1:exon
so has part: feature:2404585-2404757:-1:exon
so has part: feature:2402330-2402473:-1:exon
so has part: feature:2400516-2400719:-1:exon
so has part: feature:2399338-2399566:-1:exon
so has part: feature:2393026-2393298:-1:exon
so has part: feature:2392164-2392367:-1:exon
so has part: feature:2389361-2389502:-1:exon
so has part: feature:2388380-2388640:-1:exon
so has part: feature:2386940-2387193:-1:exon
so has part: feature:2386184-2386285:-1:exon
so has part: feature:2385440-2385591:-1:exon
so has part: feature:2383967-2384070:-1:exon
so has part: feature:2381065-2381216:-1:exon
so has part: feature:2380110-2380322:-1:exon
so has part: feature:2378211-2378493:-1:exon
so has part: feature:2376643-2376746:-1:exon
so has part: feature:2375738-2376103:-1:exon
so has part: feature:2374625-2374770:-1:exon
so has part: feature:2374295-2374535:-1:exon
so has part: feature:2373722-2373901:-1:exon
so has part: feature:2373291-2373332:-1:exon
so has part: feature:2370799-2370954:-1:exon
so has part: feature:2366564-2366630:-1:exon
so has part: feature:2365587-2365593:-1:exon

XP_017895112.1
type: Protein
SIO_000068: ncbiprotein

position:2365587:-1
position: 2365587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2421580-2421634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2411856-2411998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2410522-2410686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2405859-2406037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2405059-2405183:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2404585-2404757:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2402330-2402473:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2400516-2400719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2399338-2399566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2393026-2393298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2392164-2392367:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2389361-2389502:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2388380-2388640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2386940-2387193:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2386184-2386285:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2385440-2385591:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2383967-2384070:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2381065-2381216:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2380110-2380322:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2378211-2378493:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2376643-2376746:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2375738-2376103:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2374625-2374770:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2374295-2374535:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2373722-2373901:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2373291-2373332:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2370799-2370954:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2366564-2366630:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2365587-2365593:-1:exon

ZNF516
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2565118..2667700
location: region:2565118-2667700:1
so has part: feature:2565118-2667700:1:exon
subclass of: SO_0000010

102178872
type: Gene
SIO_000068: ncbigene

position:2565118:1
position: 2565118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2667700:1
position: 2667700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2565118-2667700:1:exon

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZNF516
product: zinc finger protein 516, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018039613.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2565118..2565373,2610195..2612095,2641000..2642364,2649970..2650074,2650796..2650863,2663652..2667700)
location: region:2565118-2667700:1
so has part: feature:2565118-2565373:1:exon
so has part: feature:2610195-2612095:1:exon
so has part: feature:2641000-2642364:1:exon
so has part: feature:2649970-2650074:1:exon
so has part: feature:2650796-2650863:1:exon
so has part: feature:2663652-2667700:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2565118-2565373:1:exon

position:2565373:1
position: 2565373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2610195-2612095:1:exon

position:2610195:1
position: 2610195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2612095:1
position: 2612095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2641000-2642364:1:exon

position:2641000:1
position: 2641000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2642364:1
position: 2642364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2649970-2650074:1:exon

position:2649970:1
position: 2649970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2650074:1
position: 2650074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2650796-2650863:1:exon

position:2650796:1
position: 2650796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2650863:1
position: 2650863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2663652-2667700:1:exon

position:2663652:1
position: 2663652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZNF516
product: zinc finger protein 516, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018039615.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2566457..2566548,2610195..2612095,2641000..2642364,2649970..2650074,2650796..2650863,2663652..2667700)
location: region:2566457-2667700:1
so has part: feature:2566457-2566548:1:exon
so has part: feature:2610195-2612095:1:exon
so has part: feature:2641000-2642364:1:exon
so has part: feature:2649970-2650074:1:exon
so has part: feature:2650796-2650863:1:exon
so has part: feature:2663652-2667700:1:exon

position:2566457:1
position: 2566457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2566457-2566548:1:exon

position:2566548:1
position: 2566548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2610195-2612095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2641000-2642364:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2649970-2650074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2650796-2650863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2663652-2667700:1:exon

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZNF516
product: zinc finger protein 516, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018039614.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2566867..2566944,2610195..2612095,2641000..2642364,2649970..2650074,2650796..2650863,2663652..2667700)
location: region:2566867-2667700:1
so has part: feature:2566867-2566944:1:exon
so has part: feature:2610195-2612095:1:exon
so has part: feature:2641000-2642364:1:exon
so has part: feature:2649970-2650074:1:exon
so has part: feature:2650796-2650863:1:exon
so has part: feature:2663652-2667700:1:exon

position:2566867:1
position: 2566867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2566867-2566944:1:exon

position:2566944:1
position: 2566944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2610195-2612095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2641000-2642364:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2649970-2650074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2650796-2650863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2663652-2667700:1:exon

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZNF516
product: zinc finger protein 516, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_018039612.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2570048..2570131,2610195..2612095,2641000..2642364,2649970..2650074,2650796..2650863,2663652..2667700)
location: region:2570048-2667700:1
so has part: feature:2570048-2570131:1:exon
so has part: feature:2610195-2612095:1:exon
so has part: feature:2641000-2642364:1:exon
so has part: feature:2649970-2650074:1:exon
so has part: feature:2650796-2650863:1:exon
so has part: feature:2663652-2667700:1:exon

position:2570048:1
position: 2570048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2570048-2570131:1:exon

position:2570131:1
position: 2570131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2610195-2612095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2641000-2642364:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2649970-2650074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2650796-2650863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2663652-2667700:1:exon

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZNF516
product: zinc finger protein 516, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018039616.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2570048..2570131,2610195..2612095,2641000..2642364,2663652..2667700)
location: region:2570048-2667700:1
so has part: feature:2570048-2570131:1:exon
so has part: feature:2610195-2612095:1:exon
so has part: feature:2641000-2642364:1:exon
so has part: feature:2663652-2667700:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2570048-2570131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2610195-2612095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2641000-2642364:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2663652-2667700:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X1
translation: MERSREAEAELRGGRSPPRASRSPEADGDRALSYSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADTGKILLRSTRKEAEGAVAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHVAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSATGPADSQQLFLQCLNLRPAAGTPARGQTGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRVGAPGDPAPGPPDPRPAARPSRRAAVPAGHSKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRAPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEVPAHPAAGAEPHRCCFPEDVSLAALSNGDQSHTLGNSPSGRVAGELATGIAACVSVLESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPSCPAQVAGLQPPSESQATYPRERLPDLHTKEHPTVGKRAPAPDLVPLDLSERSSRDDPGRRELASSLQAALAVHPCPYCSHKTYYPEVLWMHKRVWHRVSGQAMAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGVPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCALWTAGPDGTRQTRPGPGPEQPPPRPKQETSPRPGPAGGSGGFSRSATPTPTVITRVGPQAPASSRQGAGLGPPNKHSAPDPPKAKFSPQPQGQPHGKGDGGTPLPPREPPSKAGSRGLAAPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGTLRTQAHQGDFICVECGKSFHQPSHLRAHMRAHTVLLESNGLRGADAHATSADAPKQGRDHSNADAVQTVPLRKGT
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2610367..2612095,2641000..2642364,2649970..2650074,2650796..2650863,2663652..2663711)
location: region:2610367-2663711:1
so has part: feature:2610367-2612095:1:exon
so has part: feature:2641000-2642364:1:exon
so has part: feature:2649970-2650074:1:exon
so has part: feature:2650796-2650863:1:exon
so has part: feature:2663652-2663711:1:exon

XP_017895101.1
type: Protein
SIO_000068: ncbiprotein

position:2610367:1
position: 2610367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2663711:1
position: 2663711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2610367-2612095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2641000-2642364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2649970-2650074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2650796-2650863:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2663652-2663711:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X1
translation: MERSREAEAELRGGRSPPRASRSPEADGDRALSYSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADTGKILLRSTRKEAEGAVAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHVAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSATGPADSQQLFLQCLNLRPAAGTPARGQTGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRVGAPGDPAPGPPDPRPAARPSRRAAVPAGHSKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRAPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEVPAHPAAGAEPHRCCFPEDVSLAALSNGDQSHTLGNSPSGRVAGELATGIAACVSVLESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPSCPAQVAGLQPPSESQATYPRERLPDLHTKEHPTVGKRAPAPDLVPLDLSERSSRDDPGRRELASSLQAALAVHPCPYCSHKTYYPEVLWMHKRVWHRVSGQAMAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGVPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCALWTAGPDGTRQTRPGPGPEQPPPRPKQETSPRPGPAGGSGGFSRSATPTPTVITRVGPQAPASSRQGAGLGPPNKHSAPDPPKAKFSPQPQGQPHGKGDGGTPLPPREPPSKAGSRGLAAPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGTLRTQAHQGDFICVECGKSFHQPSHLRAHMRAHTVLLESNGLRGADAHATSADAPKQGRDHSNADAVQTVPLRKGT
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2610367..2612095,2641000..2642364,2649970..2650074,2650796..2650863,2663652..2663711)
location: region:2610367-2663711:1
so has part: feature:2610367-2612095:1:exon
so has part: feature:2641000-2642364:1:exon
so has part: feature:2649970-2650074:1:exon
so has part: feature:2650796-2650863:1:exon
so has part: feature:2663652-2663711:1:exon

XP_017895102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2610367-2612095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2641000-2642364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2649970-2650074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2650796-2650863:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2663652-2663711:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X1
translation: MERSREAEAELRGGRSPPRASRSPEADGDRALSYSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADTGKILLRSTRKEAEGAVAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHVAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSATGPADSQQLFLQCLNLRPAAGTPARGQTGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRVGAPGDPAPGPPDPRPAARPSRRAAVPAGHSKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRAPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEVPAHPAAGAEPHRCCFPEDVSLAALSNGDQSHTLGNSPSGRVAGELATGIAACVSVLESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPSCPAQVAGLQPPSESQATYPRERLPDLHTKEHPTVGKRAPAPDLVPLDLSERSSRDDPGRRELASSLQAALAVHPCPYCSHKTYYPEVLWMHKRVWHRVSGQAMAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGVPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCALWTAGPDGTRQTRPGPGPEQPPPRPKQETSPRPGPAGGSGGFSRSATPTPTVITRVGPQAPASSRQGAGLGPPNKHSAPDPPKAKFSPQPQGQPHGKGDGGTPLPPREPPSKAGSRGLAAPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGTLRTQAHQGDFICVECGKSFHQPSHLRAHMRAHTVLLESNGLRGADAHATSADAPKQGRDHSNADAVQTVPLRKGT
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2610367..2612095,2641000..2642364,2649970..2650074,2650796..2650863,2663652..2663711)
location: region:2610367-2663711:1
so has part: feature:2610367-2612095:1:exon
so has part: feature:2641000-2642364:1:exon
so has part: feature:2649970-2650074:1:exon
so has part: feature:2650796-2650863:1:exon
so has part: feature:2663652-2663711:1:exon

XP_017895103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2610367-2612095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2641000-2642364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2649970-2650074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2650796-2650863:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2663652-2663711:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X1
translation: MERSREAEAELRGGRSPPRASRSPEADGDRALSYSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADTGKILLRSTRKEAEGAVAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHVAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSATGPADSQQLFLQCLNLRPAAGTPARGQTGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRVGAPGDPAPGPPDPRPAARPSRRAAVPAGHSKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRAPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEVPAHPAAGAEPHRCCFPEDVSLAALSNGDQSHTLGNSPSGRVAGELATGIAACVSVLESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPSCPAQVAGLQPPSESQATYPRERLPDLHTKEHPTVGKRAPAPDLVPLDLSERSSRDDPGRRELASSLQAALAVHPCPYCSHKTYYPEVLWMHKRVWHRVSGQAMAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGVPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCALWTAGPDGTRQTRPGPGPEQPPPRPKQETSPRPGPAGGSGGFSRSATPTPTVITRVGPQAPASSRQGAGLGPPNKHSAPDPPKAKFSPQPQGQPHGKGDGGTPLPPREPPSKAGSRGLAAPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGTLRTQAHQGDFICVECGKSFHQPSHLRAHMRAHTVLLESNGLRGADAHATSADAPKQGRDHSNADAVQTVPLRKGT
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2610367..2612095,2641000..2642364,2649970..2650074,2650796..2650863,2663652..2663711)
location: region:2610367-2663711:1
so has part: feature:2610367-2612095:1:exon
so has part: feature:2641000-2642364:1:exon
so has part: feature:2649970-2650074:1:exon
so has part: feature:2650796-2650863:1:exon
so has part: feature:2663652-2663711:1:exon

XP_017895104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2610367-2612095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2641000-2642364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2649970-2650074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2650796-2650863:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2663652-2663711:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X2
translation: MERSREAEAELRGGRSPPRASRSPEADGDRALSYSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADTGKILLRSTRKEAEGAVAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHVAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSATGPADSQQLFLQCLNLRPAAGTPARGQTGRRVAELDPVNSYQAWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRVGAPGDPAPGPPDPRPAARPSRRAAVPAGHSKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRAPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEVPAHPAAGAEPHRCCFPEDVSLAALSNGDQSHTLGNSPSGRVAGELATGIAACVSVLESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPSCPAQVAGLQPPSESQATYPRERLPDLHTKEHPTVGKRAPAPDLVPLDLSERSSRDDPGRRELASSLQAALAVHPCPYCSHKTYYPEVLWMHKRVWHRVSGQAMAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGVPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCALWTAGPDGTRQTRPGPGPEQPPPRPKQETSPRPGPAGGSGGFSRSATPTPTVITRVGPQAPASSRQGAGLGPPNKHSAPDPPKAKFSPQPQGQPHGKGDGGTPLPPREPPSKAGSRGLAAPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGERPF
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2610367..2612095,2641000..2642364,2663652..2663668)
location: region:2610367-2663668:1
so has part: feature:2610367-2612095:1:exon
so has part: feature:2641000-2642364:1:exon
so has part: feature:2663652-2663668:1:exon

XP_017895105.1
type: Protein
SIO_000068: ncbiprotein

position:2663668:1
position: 2663668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2610367-2612095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2641000-2642364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2663652-2663668:1:exon

TSHZ1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TSHZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3416675..3499109)
location: region:3416675-3499109:-1
so has part: feature:3416675-3499109:-1:exon
subclass of: SO_0000010

102179155
type: Gene
SIO_000068: ncbigene

position:3416675:-1
position: 3416675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3499109:-1
position: 3499109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3416675-3499109:-1:exon

TSHZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TSHZ1
product: teashirt zinc finger homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 51 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_018039574.1
SIO_010081: TSHZ1
subclass of: SO_0000673
so part of: TSHZ1
location: complement(join(3416675..3421170,3498947..3499109))
location: region:3416675-3499109:-1
so has part: feature:3498947-3499109:-1:exon
so has part: feature:3416675-3421170:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3498947-3499109:-1:exon

position:3498947:-1
position: 3498947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3416675-3421170:-1:exon

position:3421170:-1
position: 3421170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSHZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TSHZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teashirt homolog 1
translation: MPRRKQQAPRRSAAYVPEEELKAAAIDEGSVEEDGLPGDVQEADFACSEEAEIKEAQSYQNSPISTATNQDAGYGSPFSEHSDQPAHFKGSSSKEEKEERQGAEGVSYPQDSLAQIKAVYANLFSESCWSSLALDLKKSASTTSTSDAAQKEGSTPAPTPPTSTAGATGTTASTPSSGSGASGGSGYDWHQAALAKTLQQTSSYGLLPEPSLFSTVQLYRQNNKLYGSVFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNRDKDSEKTKRWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVPLKEPVPALTKLVPSTKKRALHELAAPGSPEPAGAAAAEAALSEAAKEQKTANPYVTPNNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTTSASKKGKQLVLDPVVEEKIQSIPLPPTTHTRLPAATAAAHVKKQPDSPAGPTAVEEKKEPEKDKAALVAGEADKKIKEEGEDAGEKFEPTALYQYLREEDLDDSAKGGVDILKSLENTVSTAISKAQNGAPSWGGYPSIHAAYQLPGTVKPPPAVQSVQMQPSFAGGVKPLSAEHGALLHSPGSLTPPPHKSNVSAMEELVEKVTGKVSVKKEERPAEKEKGSPAKAASPAAKENKDFPRAEELGGSSKPQPKKGPEAEGGKAKKEGMGDAHTPNGTEPLKAKVTNGCNNLAIITDHSPEPSFINPLSALQSIMNTHLGKVSRPVSPSLDPLAMLYKISTSMLDKPAYPAPPAKPPGAADRYFYENSDQPIDLTKSKSKPLVPGAADGVSSPLRESALMDISDMVKNLTGRLTPKSSTPSTVSEKSDADGSSFEEALDELSPVHKRKGRQSNWNPQHLLILQAQFASSLRETAEGKYIMSDLGPQERVHISKFTGLSMTTISHWLANVKYQLRRTGGTKFLKNLDTGHPVFFCNDCASQFRTASTYINHLETHLGFSLKDLSKLPLNQIQEQQNVSKVLASKALGPSGAAEDELGSTFQCKLCNRTFASKHAVKLHLSKTHGKSPEDHLIYVTELEKQ
SIO_010081: TSHZ1
subclass of: SO_0000673
so part of: TSHZ1
location: complement(join(3417983..3421170,3498947..3498986))
location: region:3417983-3498986:-1
so has part: feature:3498947-3498986:-1:exon
so has part: feature:3417983-3421170:-1:exon

XP_017895063.1
type: Protein
SIO_000068: ncbiprotein

position:3417983:-1
position: 3417983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3498986:-1
position: 3498986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3498947-3498986:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3417983-3421170:-1:exon

LOC108633794
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108633794
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3444561..3447527)
location: region:3444561-3447527:-1
so has part: feature:3444561-3447527:-1:exon
subclass of: SO_0000011

108633794
type: Gene
SIO_000068: ncbigene

position:3444561:-1
position: 3444561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3447527:-1
position: 3447527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3444561-3447527:-1:exon

LOC108633794
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108633794
product: uncharacterized LOC108633794
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001917169.1
SIO_010081: LOC108633794
subclass of: SO_0000673
so part of: LOC108633794
location: complement(join(3444561..3446009,3446519..3447527))
location: region:3444561-3447527:-1
so has part: feature:3446519-3447527:-1:exon
so has part: feature:3444561-3446009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3446519-3447527:-1:exon

position:3446519:-1
position: 3446519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3444561-3446009:-1:exon

position:3446009:-1
position: 3446009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZADH2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ZADH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3501293..3513198
location: region:3501293-3513198:1
so has part: feature:3501293-3513198:1:exon
subclass of: SO_0000010

102179437
type: Gene
SIO_000068: ncbigene

position:3501293:1
position: 3501293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3513198:1
position: 3513198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3501293-3513198:1:exon

ZADH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZADH2
product: zinc binding alcohol dehydrogenase domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 68 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_018039654.1
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: join(3501293..3502012,3508274..3513198)
location: region:3501293-3513198:1
so has part: feature:3501293-3502012:1:exon
so has part: feature:3508274-3513198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3501293-3502012:1:exon

position:3502012:1
position: 3502012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3508274-3513198:1:exon

position:3508274:1
position: 3508274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZADH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZADH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc-binding alcohol dehydrogenase domain-containing protein 2 isoform X2
translation: MQRLALAGTRAIVDMSYARHFLDFQGSAIPSAMQKLVVTRLSPNFREAATLRRDCPVPLPGDGDLLVRNRFAGVNASDINYSAGRYDPSVKTPFDAGFEGVGEVVALGLSASAAFTVGQAVAYMAPGSFAEYTVVPARVAIPVPALKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNAEHVGAVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIVIGFVSGYQTPTGLSPVKAATLPAKLLKKSASVQGFFLNHYLPEFRGAMDHLLKMYAGGELVCEVDTGVLSAEGRFIGLESVFRAIDYMYMRKNTGKIVIELPPSVNSKL
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: join(3501804..3502012,3508274..3509198)
location: region:3501804-3509198:1
so has part: feature:3501804-3502012:1:exon
so has part: feature:3508274-3509198:1:exon

XP_017895143.1
type: Protein
SIO_000068: ncbiprotein

position:3501804:1
position: 3501804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3509198:1
position: 3509198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3501804-3502012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3508274-3509198:1:exon

ZADH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZADH2
product: zinc binding alcohol dehydrogenase domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_018039653.1
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: join(3502407..3502437,3508274..3513198)
location: region:3502407-3513198:1
so has part: feature:3502407-3502437:1:exon
so has part: feature:3508274-3513198:1:exon

position:3502407:1
position: 3502407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3502407-3502437:1:exon

position:3502437:1
position: 3502437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3508274-3513198:1:exon

ZADH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZADH2
product: zinc binding alcohol dehydrogenase domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_018039655.1
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: join(3506613..3506843,3508274..3513198)
location: region:3506613-3513198:1
so has part: feature:3506613-3506843:1:exon
so has part: feature:3508274-3513198:1:exon

position:3506613:1
position: 3506613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3506613-3506843:1:exon

position:3506843:1
position: 3506843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3508274-3513198:1:exon

ZADH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZADH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc-binding alcohol dehydrogenase domain-containing protein 2 isoform X1
translation: MAPGSFAEYTVVPARVAIPVPALKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNAEHVGAVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIVIGFVSGYQTPTGLSPVKAATLPAKLLKKSASVQGFFLNHYLPEFRGAMDHLLKMYAGGELVCEVDTGVLSAEGRFIGLESVFRAIDYMYMRKNTGKIVIELPPSVNSKL
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: 3508434..3509198
location: region:3508434-3509198:1
so has part: feature:3508434-3509198:1:exon

XP_017895142.1
type: Protein
SIO_000068: ncbiprotein

position:3508434:1
position: 3508434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3508434-3509198:1:exon

ZADH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZADH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc-binding alcohol dehydrogenase domain-containing protein 2 isoform X1
translation: MAPGSFAEYTVVPARVAIPVPALKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNAEHVGAVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIVIGFVSGYQTPTGLSPVKAATLPAKLLKKSASVQGFFLNHYLPEFRGAMDHLLKMYAGGELVCEVDTGVLSAEGRFIGLESVFRAIDYMYMRKNTGKIVIELPPSVNSKL
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: 3508434..3509198
location: region:3508434-3509198:1
so has part: feature:3508434-3509198:1:exon

XP_017895144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3508434-3509198:1:exon

ZNF407
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ZNF407
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3587820..3967927)
location: region:3587820-3967927:-1
so has part: feature:3587820-3967927:-1:exon
subclass of: SO_0000010

102179723
type: Gene
SIO_000068: ncbigene

position:3587820:-1
position: 3587820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3967927:-1
position: 3967927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3587820-3967927:-1:exon

ZNF407
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZNF407
product: zinc finger protein 407
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_018039541.1
SIO_010081: ZNF407
subclass of: SO_0000673
so part of: ZNF407
location: complement(join(3587820..3589823,3707060..3707238,3731898..3732018,3740249..3740332,3743910..3744076,3821038..3821112,3933339..3933453,3938876..3943544,3967856..3967927))
location: region:3587820-3967927:-1
so has part: feature:3967856-3967927:-1:exon
so has part: feature:3938876-3943544:-1:exon
so has part: feature:3933339-3933453:-1:exon
so has part: feature:3821038-3821112:-1:exon
so has part: feature:3743910-3744076:-1:exon
so has part: feature:3740249-3740332:-1:exon
so has part: feature:3731898-3732018:-1:exon
so has part: feature:3707060-3707238:-1:exon
so has part: feature:3587820-3589823:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3967856-3967927:-1:exon

position:3967856:-1
position: 3967856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3938876-3943544:-1:exon

position:3938876:-1
position: 3938876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3943544:-1
position: 3943544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3933339-3933453:-1:exon

position:3933339:-1
position: 3933339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3933453:-1
position: 3933453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3821038-3821112:-1:exon

position:3821038:-1
position: 3821038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3821112:-1
position: 3821112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3743910-3744076:-1:exon

position:3743910:-1
position: 3743910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3744076:-1
position: 3744076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3740249-3740332:-1:exon

position:3740249:-1
position: 3740249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3740332:-1
position: 3740332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3731898-3732018:-1:exon

position:3731898:-1
position: 3731898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3732018:-1
position: 3732018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3707060-3707238:-1:exon

position:3707060:-1
position: 3707060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3707238:-1
position: 3707238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3587820-3589823:-1:exon

position:3589823:-1
position: 3589823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF407
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZNF407
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 407
translation: MMDPGKKPGSDEGDRVNEEAKHPSHSASYGVDRGPVSDETADSAENPTNKRGFAESSDLDHTVEEDDGNKRASKRIKLAEAEPLWPGEPGTHGSGSPEGAGPGVGVALPGTGAAPLLSACDGGPGLPGHSSPGETAAEKEPAQETTEFLNLGGESPSPPKEMRGSGALGGPGVVLQGGPRAHSPTSCLHAEKHAARPSPRPEDQACGPTADSGLAFPGHAGQARGPPKAFSCELCGFQCAEENLLNAHCLGKTHLRRQNLAARGGFVQILTKQPLPKKPSPVGVKAGRTKPRASRPVARNSDSKVLRSVGAGTFRDFRGSFSKQSGRGSELLVEMRPSRNTSPEKMEVVEENVTSRDAAENPENQSRKLSVVVTSEGLLDRLESGRNMAQAAPILSTVSRPRAERGFLVLGSGFRRRAGAFALKGQAKKRCALLGVSKRGTNEVQKLYSKHLRAPMKMSDVESASLHGDPRLTPLETQAPKQDRANAHLPGSSDSPAGRPAPNHQVACACSTCGHTATSRAELEIHVTRCHAGELRFHCQTCGFSSASKRDVEEHTHSHQHQQTASGLRCQCCSFTSPNEVELRDHMKEKHSMGFLCPPCHLFFSSEKDVEEHRATEKHIHLLGQTKSSQSFNGDSALQTFPLSTLESENAKVAVSEAGKAAQEEPAKSRVSHGNEVRHSSKPQFQCKKCFYKTRSSTVLTRHIKLRHGQDYHFLCKACNLYSLSKEGMEKHIKRSKHLENAKKNNIGLSFEECIERVCIGANDKKEELTIPGNGRTEGHGEGVQFQEQSCLAQSILPAQELSLSSVITKEGELAPPPVPKRGRPKGNISRTCSHCGLLASSITNLTVHIRRKHSHQYSYLCKVCKYYTVTKGDMERHCATKKHKGRVEIEASGKQSSDIIVGPEGGNLDGSRKNTSVAVSDEPANPPVEADTSVSEQPPLEQGNPVEVEVENVFHPEDGETGSHLTEKKEQTSVDPEDLQGDTCPQKDDASTDENRCTHCEFKAHSSTSLELHIKRKHTREFAFYCMACDYYAVTRREMTRHAATEKHKMKRQSYLNSTNVEASSSEMSKPIIIPQGQQQQNSEEFQIISEQPSETLKSRNAADRSILDENTNLDMSKVFCASDSVETETEEESNLSEDHSFCETFQQPLDKDKVIKLEEMVPLSIPSNCGSPSKFQNASSGSSALNHETAKKRHSVLNDISSPNTHGESDGGNAEDKADKVLGKRGCPRAVDGEHPAKSAILRAPGEPLNLGSIVQDRAGSMQSSGDLKDVPEDPLLESKEVLMNSRHETKVILEEDGPASDSTIDNNDVYETVISIDDKGQAVYSFGRFDSSIIRIKNPEDGELFDQSQEGLVAAGVRMSELPLKDCAQGVKKKKADSSSFAESTRIRCDDCGFLADGLSGLNVHIAMKHPTKEKHFHCLLCGKSFYTESNLHQHLASAGHMRNEQASVEELPEGGATFKCVKCTEPFDSEQSLFLHIKGQHEELLREVNKYIVEDTEQINREREENQGNVCKYCGKMCRSSNSMAFLAHIRTHTGSKPFKCKICHFATAQLGDARNHVKRHLGMREYKCHVCGVAFVMKKHLNTHLLGKHGVGTPKERKFTCHLCDRSFTEKWALNNHMKLHTGEKPFKCTWPTCHYSFLTASAMKDHYRTHTGEKSFLCDLCGFAGGTRHALTKHRRQHTGEKPFKCDECNFASTTQSHLTRHKRVHTGEKPYRCPWCDYRSNCAENIRKHILHTGKHEGVKMYNCPKCDYGTNIPVEFRNHLKEQHPDIENPDLAYLHAGIVSKSYECRLKGQGATFVETDSPFTAAALAEESPVKDRPLRSSRRPVAPPEPVQQVIIIQGYEGEFALDASVEETAAATLQTLALAGQVARVVHITEDGQVIAAGQSGAHGGGGAPSLGLPEPLADGATQVVVVGGSMEGHGVDEPLSPSGAVIQQVTKQEILDLDEAGVTPPDAASALDALLCAVTELGGAEGPAAAEEKGRAGARDVLVQLP…
SIO_010081: ZNF407
subclass of: SO_0000673
so part of: ZNF407
location: complement(join(3588520..3589823,3707060..3707238,3731898..3732018,3740249..3740332,3743910..3744076,3821038..3821112,3933339..3933453,3938876..3943490))
location: region:3588520-3943490:-1
so has part: feature:3938876-3943490:-1:exon
so has part: feature:3933339-3933453:-1:exon
so has part: feature:3821038-3821112:-1:exon
so has part: feature:3743910-3744076:-1:exon
so has part: feature:3740249-3740332:-1:exon
so has part: feature:3731898-3732018:-1:exon
so has part: feature:3707060-3707238:-1:exon
so has part: feature:3588520-3589823:-1:exon

XP_017895030.1
type: Protein
SIO_000068: ncbiprotein

position:3588520:-1
position: 3588520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3943490:-1
position: 3943490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3938876-3943490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3933339-3933453:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3821038-3821112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3743910-3744076:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3740249-3740332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3731898-3732018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3707060-3707238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3588520-3589823:-1:exon

LOC102188994
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102188994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3967962..3984330
location: region:3967962-3984330:1
so has part: feature:3967962-3984330:1:exon
subclass of: SO_0000011

102188994
type: Gene
SIO_000068: ncbigene

position:3967962:1
position: 3967962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3984330:1
position: 3984330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3967962-3984330:1:exon

LOC102188994
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102188994
product: uncharacterized LOC102188994, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001917167.1
SIO_010081: LOC102188994
subclass of: SO_0000673
so part of: LOC102188994
location: join(3967962..3969265,3969365..3969484,3983898..3984330)
location: region:3967962-3984330:1
so has part: feature:3967962-3969265:1:exon
so has part: feature:3969365-3969484:1:exon
so has part: feature:3983898-3984330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3967962-3969265:1:exon

position:3969265:1
position: 3969265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3969365-3969484:1:exon

position:3969365:1
position: 3969365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3969484:1
position: 3969484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3983898-3984330:1:exon

position:3983898:1
position: 3983898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102188994
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102188994
product: uncharacterized LOC102188994, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001917166.1
SIO_010081: LOC102188994
subclass of: SO_0000673
so part of: LOC102188994
location: join(3967963..3969024,3969227..3969265,3969365..3969484,3970729..3971085)
location: region:3967963-3971085:1
so has part: feature:3967963-3969024:1:exon
so has part: feature:3969227-3969265:1:exon
so has part: feature:3969365-3969484:1:exon
so has part: feature:3970729-3971085:1:exon

position:3967963:1
position: 3967963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3971085:1
position: 3971085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3967963-3969024:1:exon

position:3969024:1
position: 3969024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3969227-3969265:1:exon

position:3969227:1
position: 3969227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3969365-3969484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3970729-3971085:1:exon

position:3970729:1
position: 3970729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102188994
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102188994
product: uncharacterized LOC102188994, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001297230.2
SIO_010081: LOC102188994
subclass of: SO_0000673
so part of: LOC102188994
location: join(3967964..3968858,3969330..3969484,3970729..3971085)
location: region:3967964-3971085:1
so has part: feature:3967964-3968858:1:exon
so has part: feature:3969330-3969484:1:exon
so has part: feature:3970729-3971085:1:exon

position:3967964:1
position: 3967964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3967964-3968858:1:exon

position:3968858:1
position: 3968858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3969330-3969484:1:exon

position:3969330:1
position: 3969330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3970729-3971085:1:exon

LOC102188994
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102188994
product: uncharacterized LOC102188994, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_001917165.1
SIO_010081: LOC102188994
subclass of: SO_0000673
so part of: LOC102188994
location: join(3967966..3969265,3969365..3969484,3970729..3971085)
location: region:3967966-3971085:1
so has part: feature:3967966-3969265:1:exon
so has part: feature:3969365-3969484:1:exon
so has part: feature:3970729-3971085:1:exon

position:3967966:1
position: 3967966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3967966-3969265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3969365-3969484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3970729-3971085:1:exon

LOC102188994
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102188994
product: uncharacterized LOC102188994, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_001917168.1
SIO_010081: LOC102188994
subclass of: SO_0000673
so part of: LOC102188994
location: join(3967966..3968858,3969365..3969484,3970729..3971085)
location: region:3967966-3971085:1
so has part: feature:3967966-3968858:1:exon
so has part: feature:3969365-3969484:1:exon
so has part: feature:3970729-3971085:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3967966-3968858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3969365-3969484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3970729-3971085:1:exon

CNDP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CNDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3982265..4007822)
location: region:3982265-4007822:-1
so has part: feature:3982265-4007822:-1:exon
subclass of: SO_0000010

102180002
type: Gene
SIO_000068: ncbigene

position:3982265:-1
position: 3982265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4007822:-1
position: 4007822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3982265-4007822:-1:exon

CNDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CNDP1
product: carnosine dipeptidase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018039543.1
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(3982265..3982512,3982690..3982837,3986352..3986493,3988035..3988199,3989432..3989592,3993759..3993843,3995034..3995234,3997732..3997820,3998467..3998629,3999897..4000046,4001565..4001690,4007741..4007822))
location: region:3982265-4007822:-1
so has part: feature:4007741-4007822:-1:exon
so has part: feature:4001565-4001690:-1:exon
so has part: feature:3999897-4000046:-1:exon
so has part: feature:3998467-3998629:-1:exon
so has part: feature:3997732-3997820:-1:exon
so has part: feature:3995034-3995234:-1:exon
so has part: feature:3993759-3993843:-1:exon
so has part: feature:3989432-3989592:-1:exon
so has part: feature:3988035-3988199:-1:exon
so has part: feature:3986352-3986493:-1:exon
so has part: feature:3982690-3982837:-1:exon
so has part: feature:3982265-3982512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4007741-4007822:-1:exon

position:4007741:-1
position: 4007741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4001565-4001690:-1:exon

position:4001565:-1
position: 4001565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4001690:-1
position: 4001690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3999897-4000046:-1:exon

position:3999897:-1
position: 3999897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4000046:-1
position: 4000046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3998467-3998629:-1:exon

position:3998467:-1
position: 3998467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3998629:-1
position: 3998629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3997732-3997820:-1:exon

position:3997732:-1
position: 3997732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3997820:-1
position: 3997820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3995034-3995234:-1:exon

position:3995034:-1
position: 3995034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3995234:-1
position: 3995234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3993759-3993843:-1:exon

position:3993759:-1
position: 3993759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3993843:-1
position: 3993843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3989432-3989592:-1:exon

position:3989432:-1
position: 3989432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3989592:-1
position: 3989592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3988035-3988199:-1:exon

position:3988035:-1
position: 3988035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3988199:-1
position: 3988199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3986352-3986493:-1:exon

position:3986352:-1
position: 3986352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3986493:-1
position: 3986493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3982690-3982837:-1:exon

position:3982690:-1
position: 3982690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3982837:-1
position: 3982837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3982265-3982512:-1:exon

position:3982512:-1
position: 3982512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CNDP1
product: carnosine dipeptidase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018039545.1
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(3982265..3982512,3982690..3982837,3986352..3986493,3988035..3988199,3989432..3989592,3993759..3993843,3995034..3995234,3997732..3997820,3998467..3998629,3999897..4000046,4001565..4001690,4007745..4007771))
location: region:3982265-4007771:-1
so has part: feature:4007745-4007771:-1:exon
so has part: feature:4001565-4001690:-1:exon
so has part: feature:3999897-4000046:-1:exon
so has part: feature:3998467-3998629:-1:exon
so has part: feature:3997732-3997820:-1:exon
so has part: feature:3995034-3995234:-1:exon
so has part: feature:3993759-3993843:-1:exon
so has part: feature:3989432-3989592:-1:exon
so has part: feature:3988035-3988199:-1:exon
so has part: feature:3986352-3986493:-1:exon
so has part: feature:3982690-3982837:-1:exon
so has part: feature:3982265-3982512:-1:exon

position:4007771:-1
position: 4007771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4007745-4007771:-1:exon

position:4007745:-1
position: 4007745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4001565-4001690:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3999897-4000046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3998467-3998629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3997732-3997820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3995034-3995234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3993759-3993843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3989432-3989592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3988035-3988199:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3986352-3986493:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3982690-3982837:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3982265-3982512:-1:exon

CNDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CNDP1
product: carnosine dipeptidase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018039544.1
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(3982265..3982313,3982441..3982512,3982690..3982837,3986352..3986493,3988035..3988199,3989432..3989592,3993759..3993843,3995034..3995234,3997732..3997820,3998467..3998629,3999897..4000046,4001565..4001690,4005380..4005581))
location: region:3982265-4005581:-1
so has part: feature:4005380-4005581:-1:exon
so has part: feature:4001565-4001690:-1:exon
so has part: feature:3999897-4000046:-1:exon
so has part: feature:3998467-3998629:-1:exon
so has part: feature:3997732-3997820:-1:exon
so has part: feature:3995034-3995234:-1:exon
so has part: feature:3993759-3993843:-1:exon
so has part: feature:3989432-3989592:-1:exon
so has part: feature:3988035-3988199:-1:exon
so has part: feature:3986352-3986493:-1:exon
so has part: feature:3982690-3982837:-1:exon
so has part: feature:3982441-3982512:-1:exon
so has part: feature:3982265-3982313:-1:exon

position:4005581:-1
position: 4005581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4005380-4005581:-1:exon

position:4005380:-1
position: 4005380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4001565-4001690:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3999897-4000046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3998467-3998629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3997732-3997820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3995034-3995234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3993759-3993843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3989432-3989592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3988035-3988199:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3986352-3986493:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3982690-3982837:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3982441-3982512:-1:exon

position:3982441:-1
position: 3982441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3982265-3982313:-1:exon

position:3982313:-1
position: 3982313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CNDP1
product: carnosine dipeptidase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018039542.1
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(3982265..3982512,3982690..3982837,3986352..3986493,3988035..3988199,3989432..3989592,3993759..3993843,3995034..3995234,3997732..3997820,3998467..3998629,3999897..4000046,4001565..4001690,4005380..4005580))
location: region:3982265-4005580:-1
so has part: feature:4005380-4005580:-1:exon
so has part: feature:4001565-4001690:-1:exon
so has part: feature:3999897-4000046:-1:exon
so has part: feature:3998467-3998629:-1:exon
so has part: feature:3997732-3997820:-1:exon
so has part: feature:3995034-3995234:-1:exon
so has part: feature:3993759-3993843:-1:exon
so has part: feature:3989432-3989592:-1:exon
so has part: feature:3988035-3988199:-1:exon
so has part: feature:3986352-3986493:-1:exon
so has part: feature:3982690-3982837:-1:exon
so has part: feature:3982265-3982512:-1:exon

position:4005580:-1
position: 4005580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4005380-4005580:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4001565-4001690:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3999897-4000046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3998467-3998629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3997732-3997820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3995034-3995234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3993759-3993843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3989432-3989592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3988035-3988199:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3986352-3986493:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3982690-3982837:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3982265-3982512:-1:exon

CNDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CNDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-Ala-His dipeptidase isoform X2
translation: MFSASTPPPGPLEKIFQYIDLHQDEFVQTLKEWVAVESDSVQPAPRLRRELLHMVGLAADRLRGLGARVASVDAGFQQLPDGQTLPIPPILLAELGSDPKKPTVCFYGHLDVQPARQEDGWLTDPYTLTEVDGKLYGRGTTDNKGPVLAWINAVSAFKALDEDLPVNIKFLIEGMEEAGSLALEELVRKEKSGFFSSVDCIVISDNLWISQRKPALIYGTRGNSYFTVEVKCRDQDFHSGTFGGILNEPMADLVALLGSLVDASGHILVPGIYEHVAPVTEEEKRVYEDTDLDMEEYRNSSQVKRFLFDTKEELLMHLWRYPSLSIHGIEGAFHEPGAKTVIPGRVMGKFSIRLVPHMDMSVVETQVKQHLEYIFSKRNSSNQMTVSMALGLHPWIANVSDRQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKILQDTTQKSVIMLPLGAVDDGEHSQNEKINRWNYIEGSKLFAAFFLEMAKLHSS
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(3982313,3982441..3982512,3982690..3982837,3986352..3986493,3988035..3988199,3989432..3989592,3993759..3993843,3995034..3995234,3997732..3997820,3998467..3998629,3999897..4000046,4001565..4001648))
location: region:3982313-4001648:-1
so has part: feature:4001565-4001648:-1:exon
so has part: feature:3999897-4000046:-1:exon
so has part: feature:3998467-3998629:-1:exon
so has part: feature:3997732-3997820:-1:exon
so has part: feature:3995034-3995234:-1:exon
so has part: feature:3993759-3993843:-1:exon
so has part: feature:3989432-3989592:-1:exon
so has part: feature:3988035-3988199:-1:exon
so has part: feature:3986352-3986493:-1:exon
so has part: feature:3982690-3982837:-1:exon
so has part: feature:3982441-3982512:-1:exon
so has part: feature:3982313-3982313:-1:exon

XP_017895033.1
type: Protein
SIO_000068: ncbiprotein

position:4001648:-1
position: 4001648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4001565-4001648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3999897-4000046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3998467-3998629:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3997732-3997820:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3995034-3995234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3993759-3993843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3989432-3989592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3988035-3988199:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3986352-3986493:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3982690-3982837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3982441-3982512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3982313-3982313:-1:exon

CNDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CNDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-Ala-His dipeptidase isoform X1
translation: MFSASTPPPGPLEKIFQYIDLHQDEFVQTLKEWVAVESDSVQPAPRLRRELLHMVGLAADRLRGLGARVASVDAGFQQLPDGQTLPIPPILLAELGSDPKKPTVCFYGHLDVQPARQEDGWLTDPYTLTEVDGKLYGRGTTDNKGPVLAWINAVSAFKALDEDLPVNIKFLIEGMEEAGSLALEELVRKEKSGFFSSVDCIVISDNLWISQRKPALIYGTRGNSYFTVEVKCRDQDFHSGTFGGILNEPMADLVALLGSLVDASGHILVPGIYEHVAPVTEEEKRVYEDTDLDMEEYRNSSQVKRFLFDTKEELLMHLWRYPSLSIHGIEGAFHEPGAKTVIPGRVMGKFSIRLVPHMDMSVVETQVKQHLEYIFSKRNSSNQMTVSMALGLHPWIANVSDRQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKILQDTTQKSVIMLPLGAVDDGEHSQNEKINRWNYIEGSKLFAAFFLEMAKLHSSW
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(3982437..3982512,3982690..3982837,3986352..3986493,3988035..3988199,3989432..3989592,3993759..3993843,3995034..3995234,3997732..3997820,3998467..3998629,3999897..4000046,4001565..4001648))
location: region:3982437-4001648:-1
so has part: feature:4001565-4001648:-1:exon
so has part: feature:3999897-4000046:-1:exon
so has part: feature:3998467-3998629:-1:exon
so has part: feature:3997732-3997820:-1:exon
so has part: feature:3995034-3995234:-1:exon
so has part: feature:3993759-3993843:-1:exon
so has part: feature:3989432-3989592:-1:exon
so has part: feature:3988035-3988199:-1:exon
so has part: feature:3986352-3986493:-1:exon
so has part: feature:3982690-3982837:-1:exon
so has part: feature:3982437-3982512:-1:exon

XP_017895031.1
type: Protein
SIO_000068: ncbiprotein

position:3982437:-1
position: 3982437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4001565-4001648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3999897-4000046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3998467-3998629:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3997732-3997820:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3995034-3995234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3993759-3993843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3989432-3989592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3988035-3988199:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3986352-3986493:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3982690-3982837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3982437-3982512:-1:exon

CNDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CNDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-Ala-His dipeptidase isoform X1
translation: MFSASTPPPGPLEKIFQYIDLHQDEFVQTLKEWVAVESDSVQPAPRLRRELLHMVGLAADRLRGLGARVASVDAGFQQLPDGQTLPIPPILLAELGSDPKKPTVCFYGHLDVQPARQEDGWLTDPYTLTEVDGKLYGRGTTDNKGPVLAWINAVSAFKALDEDLPVNIKFLIEGMEEAGSLALEELVRKEKSGFFSSVDCIVISDNLWISQRKPALIYGTRGNSYFTVEVKCRDQDFHSGTFGGILNEPMADLVALLGSLVDASGHILVPGIYEHVAPVTEEEKRVYEDTDLDMEEYRNSSQVKRFLFDTKEELLMHLWRYPSLSIHGIEGAFHEPGAKTVIPGRVMGKFSIRLVPHMDMSVVETQVKQHLEYIFSKRNSSNQMTVSMALGLHPWIANVSDRQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKILQDTTQKSVIMLPLGAVDDGEHSQNEKINRWNYIEGSKLFAAFFLEMAKLHSSW
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(3982437..3982512,3982690..3982837,3986352..3986493,3988035..3988199,3989432..3989592,3993759..3993843,3995034..3995234,3997732..3997820,3998467..3998629,3999897..4000046,4001565..4001648))
location: region:3982437-4001648:-1
so has part: feature:4001565-4001648:-1:exon
so has part: feature:3999897-4000046:-1:exon
so has part: feature:3998467-3998629:-1:exon
so has part: feature:3997732-3997820:-1:exon
so has part: feature:3995034-3995234:-1:exon
so has part: feature:3993759-3993843:-1:exon
so has part: feature:3989432-3989592:-1:exon
so has part: feature:3988035-3988199:-1:exon
so has part: feature:3986352-3986493:-1:exon
so has part: feature:3982690-3982837:-1:exon
so has part: feature:3982437-3982512:-1:exon

XP_017895032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4001565-4001648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3999897-4000046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3998467-3998629:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3997732-3997820:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3995034-3995234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3993759-3993843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3989432-3989592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3988035-3988199:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3986352-3986493:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3982690-3982837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3982437-3982512:-1:exon

CNDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CNDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-Ala-His dipeptidase isoform X1
translation: MFSASTPPPGPLEKIFQYIDLHQDEFVQTLKEWVAVESDSVQPAPRLRRELLHMVGLAADRLRGLGARVASVDAGFQQLPDGQTLPIPPILLAELGSDPKKPTVCFYGHLDVQPARQEDGWLTDPYTLTEVDGKLYGRGTTDNKGPVLAWINAVSAFKALDEDLPVNIKFLIEGMEEAGSLALEELVRKEKSGFFSSVDCIVISDNLWISQRKPALIYGTRGNSYFTVEVKCRDQDFHSGTFGGILNEPMADLVALLGSLVDASGHILVPGIYEHVAPVTEEEKRVYEDTDLDMEEYRNSSQVKRFLFDTKEELLMHLWRYPSLSIHGIEGAFHEPGAKTVIPGRVMGKFSIRLVPHMDMSVVETQVKQHLEYIFSKRNSSNQMTVSMALGLHPWIANVSDRQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKILQDTTQKSVIMLPLGAVDDGEHSQNEKINRWNYIEGSKLFAAFFLEMAKLHSSW
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(3982437..3982512,3982690..3982837,3986352..3986493,3988035..3988199,3989432..3989592,3993759..3993843,3995034..3995234,3997732..3997820,3998467..3998629,3999897..4000046,4001565..4001648))
location: region:3982437-4001648:-1
so has part: feature:4001565-4001648:-1:exon
so has part: feature:3999897-4000046:-1:exon
so has part: feature:3998467-3998629:-1:exon
so has part: feature:3997732-3997820:-1:exon
so has part: feature:3995034-3995234:-1:exon
so has part: feature:3993759-3993843:-1:exon
so has part: feature:3989432-3989592:-1:exon
so has part: feature:3988035-3988199:-1:exon
so has part: feature:3986352-3986493:-1:exon
so has part: feature:3982690-3982837:-1:exon
so has part: feature:3982437-3982512:-1:exon

XP_017895034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4001565-4001648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3999897-4000046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3998467-3998629:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3997732-3997820:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3995034-3995234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3993759-3993843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3989432-3989592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3988035-3988199:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3986352-3986493:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3982690-3982837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3982437-3982512:-1:exon

CNDP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CNDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4012382..4026780)
location: region:4012382-4026780:-1
so has part: feature:4012382-4026780:-1:exon
subclass of: SO_0000010

102189261
type: Gene
SIO_000068: ncbigene

position:4012382:-1
position: 4012382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4026780:-1
position: 4026780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4012382-4026780:-1:exon

CNDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CNDP2
product: CNDP dipeptidase 2 (metallopeptidase M20 family), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 248 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_018039687.1
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(4012382..4012928,4013286..4013433,4013608..4013749,4015386..4015550,4016303..4016463,4017109..4017193,4017386..4017586,4019116..4019204,4019965..4020127,4022253..4022396,4023484..4023574,4026708..4026780))
location: region:4012382-4026780:-1
so has part: feature:4026708-4026780:-1:exon
so has part: feature:4023484-4023574:-1:exon
so has part: feature:4022253-4022396:-1:exon
so has part: feature:4019965-4020127:-1:exon
so has part: feature:4019116-4019204:-1:exon
so has part: feature:4017386-4017586:-1:exon
so has part: feature:4017109-4017193:-1:exon
so has part: feature:4016303-4016463:-1:exon
so has part: feature:4015386-4015550:-1:exon
so has part: feature:4013608-4013749:-1:exon
so has part: feature:4013286-4013433:-1:exon
so has part: feature:4012382-4012928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4026708-4026780:-1:exon

position:4026708:-1
position: 4026708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4023484-4023574:-1:exon

position:4023484:-1
position: 4023484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4023574:-1
position: 4023574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4022253-4022396:-1:exon

position:4022253:-1
position: 4022253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4022396:-1
position: 4022396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4019965-4020127:-1:exon

position:4019965:-1
position: 4019965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4020127:-1
position: 4020127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4019116-4019204:-1:exon

position:4019116:-1
position: 4019116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4019204:-1
position: 4019204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4017386-4017586:-1:exon

position:4017386:-1
position: 4017386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4017586:-1
position: 4017586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4017109-4017193:-1:exon

position:4017109:-1
position: 4017109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4017193:-1
position: 4017193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4016303-4016463:-1:exon

position:4016303:-1
position: 4016303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4016463:-1
position: 4016463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4015386-4015550:-1:exon

position:4015386:-1
position: 4015386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4015550:-1
position: 4015550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4013608-4013749:-1:exon

position:4013608:-1
position: 4013608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4013749:-1
position: 4013749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4013286-4013433:-1:exon

position:4013286:-1
position: 4013286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4013433:-1
position: 4013433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4012382-4012928:-1:exon

position:4012928:-1
position: 4012928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CNDP2
product: CNDP dipeptidase 2 (metallopeptidase M20 family), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 249 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_018039689.1
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(4012382..4012928,4013286..4013433,4013608..4013749,4015386..4015550,4016303..4016463,4017109..4017193,4017386..4017586,4019116..4019204,4019965..4020127,4022253..4022396,4023484..4023574,4026397..4026670))
location: region:4012382-4026670:-1
so has part: feature:4026397-4026670:-1:exon
so has part: feature:4023484-4023574:-1:exon
so has part: feature:4022253-4022396:-1:exon
so has part: feature:4019965-4020127:-1:exon
so has part: feature:4019116-4019204:-1:exon
so has part: feature:4017386-4017586:-1:exon
so has part: feature:4017109-4017193:-1:exon
so has part: feature:4016303-4016463:-1:exon
so has part: feature:4015386-4015550:-1:exon
so has part: feature:4013608-4013749:-1:exon
so has part: feature:4013286-4013433:-1:exon
so has part: feature:4012382-4012928:-1:exon

position:4026670:-1
position: 4026670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4026397-4026670:-1:exon

position:4026397:-1
position: 4026397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4023484-4023574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4022253-4022396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4019965-4020127:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4019116-4019204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4017386-4017586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4017109-4017193:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4016303-4016463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4015386-4015550:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4013608-4013749:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4013286-4013433:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4012382-4012928:-1:exon

CNDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CNDP2
product: CNDP dipeptidase 2 (metallopeptidase M20 family), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 252 ESTs, 16 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_018039688.1
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(4012382..4012928,4013286..4013433,4013608..4013749,4015386..4015550,4016303..4016463,4017109..4017193,4017386..4017586,4019116..4019204,4019965..4020127,4022253..4022396,4023484..4023574,4024010..4025534))
location: region:4012382-4025534:-1
so has part: feature:4024010-4025534:-1:exon
so has part: feature:4023484-4023574:-1:exon
so has part: feature:4022253-4022396:-1:exon
so has part: feature:4019965-4020127:-1:exon
so has part: feature:4019116-4019204:-1:exon
so has part: feature:4017386-4017586:-1:exon
so has part: feature:4017109-4017193:-1:exon
so has part: feature:4016303-4016463:-1:exon
so has part: feature:4015386-4015550:-1:exon
so has part: feature:4013608-4013749:-1:exon
so has part: feature:4013286-4013433:-1:exon
so has part: feature:4012382-4012928:-1:exon

position:4025534:-1
position: 4025534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4024010-4025534:-1:exon

position:4024010:-1
position: 4024010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4023484-4023574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4022253-4022396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4019965-4020127:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4019116-4019204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4017386-4017586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4017109-4017193:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4016303-4016463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4015386-4015550:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4013608-4013749:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4013286-4013433:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4012382-4012928:-1:exon

CNDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CNDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSALTALFKYVDENQDRYVKKLAEWVAIQSVSAWPEKRDEIRRMMEVAAADIKQLGGSVELVDIGTQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDGKLYGRGATDDKGPVAGWINALEAFQKTKQEVPVNVRFCLEGMEESGSEGLDALIFAQKDAFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLIMLMGCLMDRKGKILIPGISEAVAPVTEEELELYDKIDFDLEEYARDVGAGTLLHGCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVSEQVTSYLTKKFAELHSPNKFKVYMGHGGKPWVSDFNHPHYLAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRRNYIEGTKMLAAYLYEVSQLKD
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(4012859..4012928,4013286..4013433,4013608..4013749,4015386..4015550,4016303..4016463,4017109..4017193,4017386..4017586,4019116..4019204,4019965..4020127,4022253..4022396,4023484..4023543))
location: region:4012859-4023543:-1
so has part: feature:4023484-4023543:-1:exon
so has part: feature:4022253-4022396:-1:exon
so has part: feature:4019965-4020127:-1:exon
so has part: feature:4019116-4019204:-1:exon
so has part: feature:4017386-4017586:-1:exon
so has part: feature:4017109-4017193:-1:exon
so has part: feature:4016303-4016463:-1:exon
so has part: feature:4015386-4015550:-1:exon
so has part: feature:4013608-4013749:-1:exon
so has part: feature:4013286-4013433:-1:exon
so has part: feature:4012859-4012928:-1:exon

XP_017895176.1
type: Protein
SIO_000068: ncbiprotein

position:4012859:-1
position: 4012859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4023543:-1
position: 4023543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4023484-4023543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4022253-4022396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4019965-4020127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4019116-4019204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4017386-4017586:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4017109-4017193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4016303-4016463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4015386-4015550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4013608-4013749:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4013286-4013433:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4012859-4012928:-1:exon

CNDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CNDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSALTALFKYVDENQDRYVKKLAEWVAIQSVSAWPEKRDEIRRMMEVAAADIKQLGGSVELVDIGTQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDGKLYGRGATDDKGPVAGWINALEAFQKTKQEVPVNVRFCLEGMEESGSEGLDALIFAQKDAFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLIMLMGCLMDRKGKILIPGISEAVAPVTEEELELYDKIDFDLEEYARDVGAGTLLHGCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVSEQVTSYLTKKFAELHSPNKFKVYMGHGGKPWVSDFNHPHYLAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRRNYIEGTKMLAAYLYEVSQLKD
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(4012859..4012928,4013286..4013433,4013608..4013749,4015386..4015550,4016303..4016463,4017109..4017193,4017386..4017586,4019116..4019204,4019965..4020127,4022253..4022396,4023484..4023543))
location: region:4012859-4023543:-1
so has part: feature:4023484-4023543:-1:exon
so has part: feature:4022253-4022396:-1:exon
so has part: feature:4019965-4020127:-1:exon
so has part: feature:4019116-4019204:-1:exon
so has part: feature:4017386-4017586:-1:exon
so has part: feature:4017109-4017193:-1:exon
so has part: feature:4016303-4016463:-1:exon
so has part: feature:4015386-4015550:-1:exon
so has part: feature:4013608-4013749:-1:exon
so has part: feature:4013286-4013433:-1:exon
so has part: feature:4012859-4012928:-1:exon

XP_017895177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4023484-4023543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4022253-4022396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4019965-4020127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4019116-4019204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4017386-4017586:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4017109-4017193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4016303-4016463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4015386-4015550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4013608-4013749:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4013286-4013433:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4012859-4012928:-1:exon

CNDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CNDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSALTALFKYVDENQDRYVKKLAEWVAIQSVSAWPEKRDEIRRMMEVAAADIKQLGGSVELVDIGTQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDGKLYGRGATDDKGPVAGWINALEAFQKTKQEVPVNVRFCLEGMEESGSEGLDALIFAQKDAFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLIMLMGCLMDRKGKILIPGISEAVAPVTEEELELYDKIDFDLEEYARDVGAGTLLHGCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVSEQVTSYLTKKFAELHSPNKFKVYMGHGGKPWVSDFNHPHYLAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRRNYIEGTKMLAAYLYEVSQLKD
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(4012859..4012928,4013286..4013433,4013608..4013749,4015386..4015550,4016303..4016463,4017109..4017193,4017386..4017586,4019116..4019204,4019965..4020127,4022253..4022396,4023484..4023543))
location: region:4012859-4023543:-1
so has part: feature:4023484-4023543:-1:exon
so has part: feature:4022253-4022396:-1:exon
so has part: feature:4019965-4020127:-1:exon
so has part: feature:4019116-4019204:-1:exon
so has part: feature:4017386-4017586:-1:exon
so has part: feature:4017109-4017193:-1:exon
so has part: feature:4016303-4016463:-1:exon
so has part: feature:4015386-4015550:-1:exon
so has part: feature:4013608-4013749:-1:exon
so has part: feature:4013286-4013433:-1:exon
so has part: feature:4012859-4012928:-1:exon

XP_017895178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4023484-4023543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4022253-4022396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4019965-4020127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4019116-4019204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4017386-4017586:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4017109-4017193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4016303-4016463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4015386-4015550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4013608-4013749:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4013286-4013433:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4012859-4012928:-1:exon

FAM69C
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: FAM69C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4052616..4077565
location: region:4052616-4077565:1
so has part: feature:4052616-4077565:1:exon
subclass of: SO_0000010

106503530
type: Gene
SIO_000068: ncbigene

position:4052616:1
position: 4052616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4077565:1
position: 4077565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4052616-4077565:1:exon

FAM69C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FAM69C
product: family with sequence similarity 69 member C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_018039344.1
SIO_010081: FAM69C
subclass of: SO_0000673
so part of: FAM69C
location: join(4052616..4052819,4062138..4062809,4073710..4073874,4076933..4077565)
location: region:4052616-4077565:1
so has part: feature:4052616-4052819:1:exon
so has part: feature:4062138-4062809:1:exon
so has part: feature:4073710-4073874:1:exon
so has part: feature:4076933-4077565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4052616-4052819:1:exon

position:4052819:1
position: 4052819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4062138-4062809:1:exon

position:4062138:1
position: 4062138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4062809:1
position: 4062809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4073710-4073874:1:exon

position:4073710:1
position: 4073710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4073874:1
position: 4073874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4076933-4077565:1:exon

position:4076933:1
position: 4076933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM69C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FAM69C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM69C
translation: MARARAAGARGRPGRCGLGGRCGRRALLACAAWTAGWVLAAALLLRAHPGVPSERCTDEKSRRILAALCQDYRGGALGGDLCEDLCEAGQLRYRRCLYYERGKKVLQADWRGRPVVLKSKEEAFSSFPPLGLLDGQPEAGGQDLPEAELLVLAAGEARSALGLEPAEGGLGRLGLARRGPRRRGQLASLWALLRQEEFVLLSLLRGRSPHAPPVLGSCGHFYAVEHLAAGSPGHRALFPLGPDGGRRGQARAVSGVALSFLDMVRHFDHDFAHRLHLCDVKPENFAIRSDFTVVAIDVDMAFFEPKMREILEQNCTRDEDCNFFDCFSKCDLRVHRCGAQRANSNLQVVCDKIFRHWFSSPHGSSAVSGPLRGQLRAAVQECAAPSTQGTPRVLGRLRSLLQAVLRDLRDGEEPHPGVRSRLRGDPHHGTPGTARKAPAVFGNHPFE
SIO_010081: FAM69C
subclass of: SO_0000673
so part of: FAM69C
location: join(4052616..4052819,4062138..4062809,4073710..4073874,4076933..4077235)
location: region:4052616-4077235:1
so has part: feature:4052616-4052819:1:exon
so has part: feature:4062138-4062809:1:exon
so has part: feature:4073710-4073874:1:exon
so has part: feature:4076933-4077235:1:exon

XP_017894833.1
type: Protein
SIO_000068: ncbiprotein

position:4077235:1
position: 4077235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4052616-4052819:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4062138-4062809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4073710-4073874:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4076933-4077235:1:exon

C24H18orf63
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: C24H18orf63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4125278..4149038)
location: region:4125278-4149038:-1
so has part: feature:4125278-4149038:-1:exon
subclass of: SO_0000010

102180275
type: Gene
SIO_000068: ncbigene

position:4125278:-1
position: 4125278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4149038:-1
position: 4149038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4125278-4149038:-1:exon

C24H18orf63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: C24H18orf63
product: chromosome 24 C18orf63 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018039345.1
SIO_010081: C24H18orf63
subclass of: SO_0000673
so part of: C24H18orf63
location: complement(join(4125278..4126396,4133368..4133551,4134472..4134557,4134671..4134767,4135666..4135775,4138324..4138400,4140694..4140735,4141449..4141560,4143497..4143553,4146839..4146917,4148891..4149038))
location: region:4125278-4149038:-1
so has part: feature:4148891-4149038:-1:exon
so has part: feature:4146839-4146917:-1:exon
so has part: feature:4143497-4143553:-1:exon
so has part: feature:4141449-4141560:-1:exon
so has part: feature:4140694-4140735:-1:exon
so has part: feature:4138324-4138400:-1:exon
so has part: feature:4135666-4135775:-1:exon
so has part: feature:4134671-4134767:-1:exon
so has part: feature:4134472-4134557:-1:exon
so has part: feature:4133368-4133551:-1:exon
so has part: feature:4125278-4126396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4148891-4149038:-1:exon

position:4148891:-1
position: 4148891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4146839-4146917:-1:exon

position:4146839:-1
position: 4146839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4146917:-1
position: 4146917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4143497-4143553:-1:exon

position:4143497:-1
position: 4143497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4143553:-1
position: 4143553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4141449-4141560:-1:exon

position:4141449:-1
position: 4141449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4141560:-1
position: 4141560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4140694-4140735:-1:exon

position:4140694:-1
position: 4140694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4140735:-1
position: 4140735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4138324-4138400:-1:exon

position:4138324:-1
position: 4138324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4138400:-1
position: 4138400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4135666-4135775:-1:exon

position:4135666:-1
position: 4135666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4135775:-1
position: 4135775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4134671-4134767:-1:exon

position:4134671:-1
position: 4134671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4134767:-1
position: 4134767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4134472-4134557:-1:exon

position:4134472:-1
position: 4134472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4134557:-1
position: 4134557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4133368-4133551:-1:exon

position:4133368:-1
position: 4133368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4133551:-1
position: 4133551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4125278-4126396:-1:exon

position:4126396:-1
position: 4126396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C24H18orf63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: C24H18orf63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C18orf63 homolog
translation: MNDSKQQSLFFITLPDLHKLCAVKIILSNGVADTEIRSRQMKICRQLLFLHQDILTSPVPGIFTQIWVVMAITFYKAGKLNAYLEEYEAKVEAPQQVIPVILQNCLSYSLTARLAPAWNKAGHLLIQGREFLSQMGKQSAVVLDINVTSTQVCLSIEAHTIRLPPPQLREFDISQSIIKSFETNQNAVIEEQSILSNWCYVLPSMKMGRMISILHTIPPDCPFHSYEDFQMHWDGLYGYKLPEDLGTIEIYCCIYFKMIGERLFTYPLSCIRSQPIQFFPRVDMEGVLKSFLSDLKSKLPHICGFPIKMTTKPCYYTQELTTLHLQENKVKPPNLTAEQRFRSSPAQAPSTRPAGAPGFPPCSVAAGHKGARSVSPPKPSGSSALRLQPESVLSSKKPPSDQAAQVLEVPKPTRGNAQVQDTNFSSQRNIAPRFIPVFKSRPLQMTKSILAPENPRRKERVNTESKLFSLKSSEIPDDKLNLDPTTGKRPNHSIQMKGKNLNLKTCRSLPEKNTESYGNMTKKPLSSGKSLITSLSESKQLSNSSVFQMPTSNLGVIKSAAGSQVNGKENLTSKYITQILGKSHESLKVKRRPHIFESDTDPEDSQPLQPQSIDQTKEVDVTDHQLTVSRAAPKSKKKLCQNSPKTSKKPHSNTVLCGQPHARKQVKNQNTVLIWGHSSCDTLLNPLNKDLNDLPKIS
SIO_010081: C24H18orf63
subclass of: SO_0000673
so part of: C24H18orf63
location: complement(join(4125278..4126396,4133368..4133551,4134472..4134557,4134671..4134767,4135666..4135775,4138324..4138400,4140694..4140735,4141449..4141560,4143497..4143553,4146839..4146917,4148891..4149024))
location: region:4125278-4149024:-1
so has part: feature:4148891-4149024:-1:exon
so has part: feature:4146839-4146917:-1:exon
so has part: feature:4143497-4143553:-1:exon
so has part: feature:4141449-4141560:-1:exon
so has part: feature:4140694-4140735:-1:exon
so has part: feature:4138324-4138400:-1:exon
so has part: feature:4135666-4135775:-1:exon
so has part: feature:4134671-4134767:-1:exon
so has part: feature:4134472-4134557:-1:exon
so has part: feature:4133368-4133551:-1:exon
so has part: feature:4125278-4126396:-1:exon

XP_017894834.1
type: Protein
SIO_000068: ncbiprotein

position:4149024:-1
position: 4149024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4148891-4149024:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4146839-4146917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4143497-4143553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4141449-4141560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4140694-4140735:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4138324-4138400:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4135666-4135775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4134671-4134767:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4134472-4134557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4133368-4133551:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4125278-4126396:-1:exon

CYB5A
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
alternative label: CYB5
gene: CYB5A
gene synonym: CYB5
note: cytochrome b5; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 4163134..4197074
location: region:4163134-4197074:1
so has part: feature:4163134-4197074:1:exon
subclass of: SO_0000010

100861011
type: Gene
SIO_000068: ncbigene

position:4163134:1
position: 4163134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4197074:1
position: 4197074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4163134-4197074:1:exon

CYB5A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
alternative label: CYB5
gene: CYB5A
gene synonym: CYB5
product: cytochrome b5
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001287234.1
SIO_010081: CYB5A
subclass of: SO_0000673
so part of: CYB5A
location: join(4163134..4163262,4189328..4189456,4191557..4191586,4195062..4195096,4196993..4197074)
location: region:4163134-4197074:1
so has part: feature:4163134-4163262:1:exon
so has part: feature:4189328-4189456:1:exon
so has part: feature:4191557-4191586:1:exon
so has part: feature:4195062-4195096:1:exon
so has part: feature:4196993-4197074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4163134-4163262:1:exon

position:4163262:1
position: 4163262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4189328-4189456:1:exon

position:4189328:1
position: 4189328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4189456:1
position: 4189456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4191557-4191586:1:exon

position:4191557:1
position: 4191557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4191586:1
position: 4191586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4195062-4195096:1:exon

position:4195062:1
position: 4195062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4195096:1
position: 4195096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4196993-4197074:1:exon

position:4196993:1
position: 4196993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CYB5A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
alternative label: CYB5
gene: CYB5A
gene synonym: CYB5
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: cytochrome b5
translation: MAEESSKPVKYYTLEEIQKHNHSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDDRSKITKPSESIITTIDSNSSWWTNWLIPAISALVVALMYHLYTSEN
SIO_010081: CYB5A
subclass of: SO_0000673
so part of: CYB5A
location: join(4163134..4163262,4189328..4189456,4191557..4191586,4195062..4195096,4196993..4197074)
location: region:4163134-4197074:1
so has part: feature:4163134-4163262:1:exon
so has part: feature:4189328-4189456:1:exon
so has part: feature:4191557-4191586:1:exon
so has part: feature:4195062-4195096:1:exon
so has part: feature:4196993-4197074:1:exon

NP_001274163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4163134-4163262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4189328-4189456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4191557-4191586:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4195062-4195096:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4196993-4197074:1:exon

TIMM21
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TIMM21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4255609..4261686)
location: region:4255609-4261686:-1
so has part: feature:4255609-4261686:-1:exon
subclass of: SO_0000010

102190279
type: Gene
SIO_000068: ncbigene

position:4255609:-1
position: 4255609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4261686:-1
position: 4261686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4255609-4261686:-1:exon

TIMM21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TIMM21
product: translocase of inner mitochondrial membrane 21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 81 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_005696954.3
SIO_010081: TIMM21
subclass of: SO_0000673
so part of: TIMM21
location: complement(join(4255609..4256078,4256181..4256286,4256374..4256447,4258962..4259059,4259157..4259219,4261048..4261686))
location: region:4255609-4261686:-1
so has part: feature:4261048-4261686:-1:exon
so has part: feature:4259157-4259219:-1:exon
so has part: feature:4258962-4259059:-1:exon
so has part: feature:4256374-4256447:-1:exon
so has part: feature:4256181-4256286:-1:exon
so has part: feature:4255609-4256078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4261048-4261686:-1:exon

position:4261048:-1
position: 4261048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4259157-4259219:-1:exon

position:4259157:-1
position: 4259157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4259219:-1
position: 4259219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4258962-4259059:-1:exon

position:4258962:-1
position: 4258962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4259059:-1
position: 4259059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4256374-4256447:-1:exon

position:4256374:-1
position: 4256374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4256447:-1
position: 4256447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4256181-4256286:-1:exon

position:4256181:-1
position: 4256181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4256286:-1
position: 4256286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4255609-4256078:-1:exon

position:4256078:-1
position: 4256078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIMM21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TIMM21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim21
translation: MICTLLRAVRCTERLHGCPGKPWFLPHSVPHRACSQTEPRWRWGLQEQNTAARPRYIWGVNQRSIWTQGRSLQSAKEDGSKRVSVHRSQGGETVLSTSQKVKEAGRDFTYLIVVLIGITITGGLFYTIFRELFSSSSPNKIYGKALEKCRSHPEVISVFGEPVKGYGEATRRGRRQHVSFIEYTKDGLKHMRVKFYIQGSEPGKQGTVHLEVKENPESGEYEFRYIFVELEPYSRTIVIEDNRS
SIO_010081: TIMM21
subclass of: SO_0000673
so part of: TIMM21
location: complement(join(4255986..4256078,4256181..4256286,4256374..4256447,4258962..4259059,4259157..4259219,4261048..4261348))
location: region:4255986-4261348:-1
so has part: feature:4261048-4261348:-1:exon
so has part: feature:4259157-4259219:-1:exon
so has part: feature:4258962-4259059:-1:exon
so has part: feature:4256374-4256447:-1:exon
so has part: feature:4256181-4256286:-1:exon
so has part: feature:4255986-4256078:-1:exon

XP_005697011.1
type: Protein
SIO_000068: ncbiprotein

position:4255986:-1
position: 4255986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4261348:-1
position: 4261348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4261048-4261348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4259157-4259219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4258962-4259059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4256374-4256447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4256181-4256286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4255986-4256078:-1:exon

FBXO15
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: FBXO15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4261770..4296715
location: region:4261770-4296715:1
so has part: feature:4261770-4296715:1:exon
subclass of: SO_0000010

102179667
type: Gene
SIO_000068: ncbigene

position:4261770:1
position: 4261770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4296715:1
position: 4296715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4261770-4296715:1:exon

FBXO15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FBXO15
product: F-box protein 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_018039710.1
SIO_010081: FBXO15
subclass of: SO_0000673
so part of: FBXO15
location: join(4261770..4262446,4266950..4267060,4268877..4268981,4272830..4273072,4273538..4273747,4277301..4277427,4278481..4278563,4279479..4279621,4295059..4295183,4296337..4296715)
location: region:4261770-4296715:1
so has part: feature:4261770-4262446:1:exon
so has part: feature:4266950-4267060:1:exon
so has part: feature:4268877-4268981:1:exon
so has part: feature:4272830-4273072:1:exon
so has part: feature:4273538-4273747:1:exon
so has part: feature:4277301-4277427:1:exon
so has part: feature:4278481-4278563:1:exon
so has part: feature:4279479-4279621:1:exon
so has part: feature:4295059-4295183:1:exon
so has part: feature:4296337-4296715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4261770-4262446:1:exon

position:4262446:1
position: 4262446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4266950-4267060:1:exon

position:4266950:1
position: 4266950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4267060:1
position: 4267060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4268877-4268981:1:exon

position:4268877:1
position: 4268877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4268981:1
position: 4268981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4272830-4273072:1:exon

position:4272830:1
position: 4272830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4273072:1
position: 4273072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4273538-4273747:1:exon

position:4273538:1
position: 4273538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4273747:1
position: 4273747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4277301-4277427:1:exon

position:4277301:1
position: 4277301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4277427:1
position: 4277427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4278481-4278563:1:exon

position:4278481:1
position: 4278481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4278563:1
position: 4278563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4279479-4279621:1:exon

position:4279479:1
position: 4279479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4279621:1
position: 4279621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4295059-4295183:1:exon

position:4295059:1
position: 4295059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4295183:1
position: 4295183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4296337-4296715:1:exon

position:4296337:1
position: 4296337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXO15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FBXO15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 15
translation: MAIGRGRLLQLQWQCLLARPPPLGCFGSAFGSPGAAAERAGFRTRPGAMLPSGPAALSRHARQDKVCRRPSAGCSASLDSLPAEVLLKILSYLDAAALLCAGCVSRRFYHLASDNFIWIRLYSAAFSPKRSHWRVDPAEKTDLSVNLLSAGDKEAGYWKKEYLTKQIASVKAALAQVLKPLHPNTGLPVKTKEALRVSGLGWVIILRGADGREYTMEHADLSVNDSSVTVAWYGKDWPPLATLSTLDLCGVTPVFMGKSRAPSRTRPRWHSLITKYQLSQLTESSAVGGDRLMRVFCLPPGLVVGLWKREEELAFVMANLHLHRLVERSMLGSPAVPYELPPHAPISDDSPERGLHGYRLHVDMHNGGVSCLCGSFRNLSASKGYLENEYMKLSVISFKNNTEHLPLIGKVGLSWKTNSFDGCIKSCSIMDLTLLEEYGQPFWCFSSPVCVRCCPGPSDGPNFLGEAYYVDYSDSEGRLRMELVWIEETEEYFIVSLALYLRLAKVNQWFGTEY
SIO_010081: FBXO15
subclass of: SO_0000673
so part of: FBXO15
location: join(4262319..4262446,4266950..4267060,4268877..4268981,4272830..4273072,4273538..4273747,4277301..4277427,4278481..4278563,4279479..4279621,4295059..4295183,4296337..4296606)
location: region:4262319-4296606:1
so has part: feature:4262319-4262446:1:exon
so has part: feature:4266950-4267060:1:exon
so has part: feature:4268877-4268981:1:exon
so has part: feature:4272830-4273072:1:exon
so has part: feature:4273538-4273747:1:exon
so has part: feature:4277301-4277427:1:exon
so has part: feature:4278481-4278563:1:exon
so has part: feature:4279479-4279621:1:exon
so has part: feature:4295059-4295183:1:exon
so has part: feature:4296337-4296606:1:exon

XP_017895199.1
type: Protein
SIO_000068: ncbiprotein

position:4262319:1
position: 4262319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4296606:1
position: 4296606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4262319-4262446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4266950-4267060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4268877-4268981:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4272830-4273072:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4273538-4273747:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4277301-4277427:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4278481-4278563:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4279479-4279621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4295059-4295183:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4296337-4296606:1:exon

LOC102190834
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102190834
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4324162..4324870)
location: region:4324162-4324870:-1
so has part: feature:4324162-4324870:-1:exon

102190834
type: Gene
SIO_000068: ncbigene

position:4324162:-1
position: 4324162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4324870:-1
position: 4324870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4324162-4324870:-1:exon

LOC102190834
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102190834
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102190834
subclass of: SO_0000673
so part of: LOC102190834
location: complement(4324162..4324870)
location: region:4324162-4324870:-1
so has part: feature:4324162-4324870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4324162-4324870:-1:exon

LOC106503531
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4495459..4495963)
location: region:4495459-4495963:-1
so has part: feature:4495459-4495963:-1:exon

106503531
type: Gene
SIO_000068: ncbigene

position:4495459:-1
position: 4495459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4495963:-1
position: 4495963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4495459-4495963:-1:exon

LOC106503531
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC106503531
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC106503531
subclass of: SO_0000673
so part of: LOC106503531
location: complement(4495459..4495963)
location: region:4495459-4495963:-1
so has part: feature:4495459-4495963:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4495459-4495963:-1:exon

TRNAA-CGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAA-CGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 4692139..4692210
location: region:4692139-4692210:1
so has part: feature:4692139-4692210:1:exon
subclass of: SO_0000663

108633814
type: Gene
SIO_000068: ncbigene

position:4692139:1
position: 4692139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4692210:1
position: 4692210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4692139-4692210:1:exon

TRNAA-CGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAA-CGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon CGC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:4692171..4692173,aa:Ala,seq:cgc)
SIO_010081: TRNAA-CGC
subclass of: SO_0000673
so part of: TRNAA-CGC
location: 4692139..4692210
location: region:4692139-4692210:1
so has part: feature:4692139-4692210:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4692139-4692210:1:exon

NETO1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: NETO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5089458..5194281
location: region:5089458-5194281:1
so has part: feature:5089458-5194281:1:exon
subclass of: SO_0000010

102191571
type: Gene
SIO_000068: ncbigene

position:5089458:1
position: 5089458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5194281:1
position: 5194281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5089458-5194281:1:exon

NETO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NETO1
product: neuropilin and tolloid like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005696956.3
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5089458..5089807,5091817..5091870,5092108..5092245,5097242..5097490,5146934..5146975,5147094..5147221,5159283..5159511,5188135..5188248,5190880..5191438,5192409..5192483,5193750..5194281)
location: region:5089458-5194281:1
so has part: feature:5089458-5089807:1:exon
so has part: feature:5091817-5091870:1:exon
so has part: feature:5092108-5092245:1:exon
so has part: feature:5097242-5097490:1:exon
so has part: feature:5146934-5146975:1:exon
so has part: feature:5147094-5147221:1:exon
so has part: feature:5159283-5159511:1:exon
so has part: feature:5188135-5188248:1:exon
so has part: feature:5190880-5191438:1:exon
so has part: feature:5192409-5192483:1:exon
so has part: feature:5193750-5194281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5089458-5089807:1:exon

position:5089807:1
position: 5089807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5091817-5091870:1:exon

position:5091817:1
position: 5091817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5091870:1
position: 5091870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5092108-5092245:1:exon

position:5092108:1
position: 5092108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5092245:1
position: 5092245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5097242-5097490:1:exon

position:5097242:1
position: 5097242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5097490:1
position: 5097490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5146934-5146975:1:exon

position:5146934:1
position: 5146934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5146975:1
position: 5146975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5147094-5147221:1:exon

position:5147094:1
position: 5147094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5147221:1
position: 5147221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5159283-5159511:1:exon

position:5159283:1
position: 5159283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5159511:1
position: 5159511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5188135-5188248:1:exon

position:5188135:1
position: 5188135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5188248:1
position: 5188248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5190880-5191438:1:exon

position:5190880:1
position: 5190880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5191438:1
position: 5191438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5192409-5192483:1:exon

position:5192409:1
position: 5192409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5192483:1
position: 5192483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5193750-5194281:1:exon

position:5193750:1
position: 5193750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NETO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NETO1
product: neuropilin and tolloid like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_013974336.2
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5089458..5089807,5091817..5091870,5092108..5092245,5097242..5097490,5146934..5146975,5147094..5147221,5159283..5159511,5188135..5188248,5190880..5191438,5192409..5192483,5193329..5194272)
location: region:5089458-5194272:1
so has part: feature:5089458-5089807:1:exon
so has part: feature:5091817-5091870:1:exon
so has part: feature:5092108-5092245:1:exon
so has part: feature:5097242-5097490:1:exon
so has part: feature:5146934-5146975:1:exon
so has part: feature:5147094-5147221:1:exon
so has part: feature:5159283-5159511:1:exon
so has part: feature:5188135-5188248:1:exon
so has part: feature:5190880-5191438:1:exon
so has part: feature:5192409-5192483:1:exon
so has part: feature:5193329-5194272:1:exon

position:5194272:1
position: 5194272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5089458-5089807:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5091817-5091870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5092108-5092245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5097242-5097490:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5146934-5146975:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5147094-5147221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5159283-5159511:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5188135-5188248:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5190880-5191438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5192409-5192483:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5193329-5194272:1:exon

position:5193329:1
position: 5193329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NETO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NETO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 1
translation: MIYGRSLFHIVASLIILHLSGAAKKGTEKQTTSETQKSVQCGTWTKHADGGIFTSPNYPSKYPPDRECIYIIEAAPRQCIELYFDEKYSIEPSWECKFDHIEVRDGPFGFSPIIGRFCGQQNPPVIKSSGRFLWIKFFADGELESMGFSARYNFTPDPDFKDLGVLKPLPVCEFEMGGPEGIVESIQIMKEGKASASEAVDCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGSSSVEDLKAKFCSTVANDVMLRTGLGVIRMWADEGSRNSRFQMLFTSFQEPPCEGNTFFCHSNMCINNTLVCNGLQNCVYPWDENHCKEKRKAGLLDQLTNTSGTVIGVTSCIVIILIIISVIVQIKQPRKKYVQRKSDFDQTVFQEVFEPPHYELCTLRGTGATADFADVADDFENYHKLRRSSSKCIHDHHCGSQLSSAKGSRSNLSTRDASVLTEMPPQPVKPLIPPMNRRNILVMKHNYSQEAADACDIDEIEEVPTTSHRLSRHEKAVQRFCLIGSLSKHESEYNTTRV
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5089780..5089807,5091817..5091870,5092108..5092245,5097242..5097490,5146934..5146975,5147094..5147221,5159283..5159511,5188135..5188248,5190880..5191438,5192409..5192469)
location: region:5089780-5192469:1
so has part: feature:5089780-5089807:1:exon
so has part: feature:5091817-5091870:1:exon
so has part: feature:5092108-5092245:1:exon
so has part: feature:5097242-5097490:1:exon
so has part: feature:5146934-5146975:1:exon
so has part: feature:5147094-5147221:1:exon
so has part: feature:5159283-5159511:1:exon
so has part: feature:5188135-5188248:1:exon
so has part: feature:5190880-5191438:1:exon
so has part: feature:5192409-5192469:1:exon

XP_005697013.1
type: Protein
SIO_000068: ncbiprotein

position:5089780:1
position: 5089780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5192469:1
position: 5192469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5089780-5089807:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5091817-5091870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5092108-5092245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5097242-5097490:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5146934-5146975:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5147094-5147221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5159283-5159511:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5188135-5188248:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5190880-5191438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5192409-5192469:1:exon

NETO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NETO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 1
translation: MIYGRSLFHIVASLIILHLSGAAKKGTEKQTTSETQKSVQCGTWTKHADGGIFTSPNYPSKYPPDRECIYIIEAAPRQCIELYFDEKYSIEPSWECKFDHIEVRDGPFGFSPIIGRFCGQQNPPVIKSSGRFLWIKFFADGELESMGFSARYNFTPDPDFKDLGVLKPLPVCEFEMGGPEGIVESIQIMKEGKASASEAVDCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGSSSVEDLKAKFCSTVANDVMLRTGLGVIRMWADEGSRNSRFQMLFTSFQEPPCEGNTFFCHSNMCINNTLVCNGLQNCVYPWDENHCKEKRKAGLLDQLTNTSGTVIGVTSCIVIILIIISVIVQIKQPRKKYVQRKSDFDQTVFQEVFEPPHYELCTLRGTGATADFADVADDFENYHKLRRSSSKCIHDHHCGSQLSSAKGSRSNLSTRDASVLTEMPPQPVKPLIPPMNRRNILVMKHNYSQEAADACDIDEIEEVPTTSHRLSRHEKAVQRFCLIGSLSKHESEYNTTRV
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5089780..5089807,5091817..5091870,5092108..5092245,5097242..5097490,5146934..5146975,5147094..5147221,5159283..5159511,5188135..5188248,5190880..5191438,5192409..5192469)
location: region:5089780-5192469:1
so has part: feature:5089780-5089807:1:exon
so has part: feature:5091817-5091870:1:exon
so has part: feature:5092108-5092245:1:exon
so has part: feature:5097242-5097490:1:exon
so has part: feature:5146934-5146975:1:exon
so has part: feature:5147094-5147221:1:exon
so has part: feature:5159283-5159511:1:exon
so has part: feature:5188135-5188248:1:exon
so has part: feature:5190880-5191438:1:exon
so has part: feature:5192409-5192469:1:exon

XP_013829790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5089780-5089807:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5091817-5091870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5092108-5092245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5097242-5097490:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5146934-5146975:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5147094-5147221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5159283-5159511:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5188135-5188248:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5190880-5191438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5192409-5192469:1:exon

CBLN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5355552..5363346
location: region:5355552-5363346:1
so has part: feature:5355552-5363346:1:exon
subclass of: SO_0000010

102184747
type: Gene
SIO_000068: ncbigene

position:5355552:1
position: 5355552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5363346:1
position: 5363346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5355552-5363346:1:exon

CBLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CBLN2
product: cerebellin 2 precursor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018039810.1
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5355552..5355702,5356195..5356368,5356795..5356839,5358012..5358503,5361285..5361404,5361640..5363346)
location: region:5355552-5363346:1
so has part: feature:5355552-5355702:1:exon
so has part: feature:5356195-5356368:1:exon
so has part: feature:5356795-5356839:1:exon
so has part: feature:5358012-5358503:1:exon
so has part: feature:5361285-5361404:1:exon
so has part: feature:5361640-5363346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5355552-5355702:1:exon

position:5355702:1
position: 5355702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5356195-5356368:1:exon

position:5356195:1
position: 5356195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5356368:1
position: 5356368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5356795-5356839:1:exon

position:5356795:1
position: 5356795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5356839:1
position: 5356839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5358012-5358503:1:exon

position:5358012:1
position: 5358012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5358503:1
position: 5358503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5361285-5361404:1:exon

position:5361285:1
position: 5361285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5361404:1
position: 5361404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5361640-5363346:1:exon

position:5361640:1
position: 5361640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CBLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CBLN2
product: cerebellin 2 precursor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018039811.1
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5356732..5356839,5358012..5358503,5361285..5361404,5361640..5363346)
location: region:5356732-5363346:1
so has part: feature:5356732-5356839:1:exon
so has part: feature:5358012-5358503:1:exon
so has part: feature:5361285-5361404:1:exon
so has part: feature:5361640-5363346:1:exon

position:5356732:1
position: 5356732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5356732-5356839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5358012-5358503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5361285-5361404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5361640-5363346:1:exon

CBLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-2
translation: MFQVRWRSPSKDHPGALTIRAGDRGQRRLALAPRIRARPPALRAPAARMPAPGRGPRGPPQTMPGRRGALREPAGCGSGLGAALALLLLLLPAGCPVRAQNDTEPIVLEGKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5356831..5356839,5358012..5358503,5361285..5361404,5361640..5361837)
location: region:5356831-5361837:1
so has part: feature:5356831-5356839:1:exon
so has part: feature:5358012-5358503:1:exon
so has part: feature:5361285-5361404:1:exon
so has part: feature:5361640-5361837:1:exon

XP_017895299.1
type: Protein
SIO_000068: ncbiprotein

position:5356831:1
position: 5356831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5361837:1
position: 5361837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5356831-5356839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5358012-5358503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5361285-5361404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5361640-5361837:1:exon

CBLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-2
translation: MFQVRWRSPSKDHPGALTIRAGDRGQRRLALAPRIRARPPALRAPAARMPAPGRGPRGPPQTMPGRRGALREPAGCGSGLGAALALLLLLLPAGCPVRAQNDTEPIVLEGKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5356831..5356839,5358012..5358503,5361285..5361404,5361640..5361837)
location: region:5356831-5361837:1
so has part: feature:5356831-5356839:1:exon
so has part: feature:5358012-5358503:1:exon
so has part: feature:5361285-5361404:1:exon
so has part: feature:5361640-5361837:1:exon

XP_017895300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5356831-5356839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5358012-5358503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5361285-5361404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5361640-5361837:1:exon

LOC102180814
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102180814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5870461..5871963)
location: region:5870461-5871963:-1
so has part: feature:5870461-5871963:-1:exon

102180814
type: Gene
SIO_000068: ncbigene

position:5870461:-1
position: 5870461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5871963:-1
position: 5871963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5870461-5871963:-1:exon

LOC102180814
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9925
gene: LOC102180814
product: high mobility group protein 20A pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 7 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_001917192.1
SIO_010081: LOC102180814
so part of: LOC102180814
location: complement(5870461..5871963)
location: region:5870461-5871963:-1
so has part: feature:5870461-5871963:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5870461-5871963:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 6087535..6087606
location: region:6087535-6087606:1
so has part: feature:6087535-6087606:1:exon
subclass of: SO_0000663

108633825
type: Gene
SIO_000068: ncbigene

position:6087535:1
position: 6087535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6087606:1
position: 6087606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6087535-6087606:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:6087568..6087570,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 6087535..6087606
location: region:6087535-6087606:1
so has part: feature:6087535-6087606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6087535-6087606:1:exon

LOC108633770
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108633770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<6381492..>6384839)
location: region:6381492-6384839:-1
so has part: feature:6381492-6384839:-1:exon
subclass of: SO_0000010

108633770
type: Gene
SIO_000068: ncbigene

position:6381492:-1
position: 6381492
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:6384839:-1
position: 6384839
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6381492-6384839:-1:exon

LOC108633770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC108633770
product: protein NYNRIN-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 31% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018039350.1
SIO_010081: LOC108633770
subclass of: SO_0000673
so part of: LOC108633770
location: complement(join(<6381492..6382559,6382628..>6384839))
location: region:6381492-6384839:-1
so has part: feature:6382628-6384839:-1:exon
so has part: feature:6381492-6382559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6382628-6384839:-1:exon

position:6382628:-1
position: 6382628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6381492-6382559:-1:exon

position:6382559:-1
position: 6382559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108633770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC108633770
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(6382517..6382519),aa:OTHER)
transl except: (pos:complement(6384729..6384731),aa:OTHER)
product: LOW QUALITY PROTEIN: protein NYNRIN-like
translation: TGTKRYGWTTKRHVNLGTHQVTHSFLVIPECPAPLLXRDLLSKVNAQIHFDHGQVSVLDGTGHPLQVLSLALKDEYSLYLPEAPATISPEVQPWVQRYPQAWAETAGMGLAKQRPPIIVELKASASPVRVRQYPMSQEARQGITPHIQCLIDAGVLKRCWSPWNTPLLPVKKPGGTDFRPVQDLREINKWVNDIHPMVPNPYTLLSKLPPNYIWFTVLDLKDAFFSLPLAPASQEIFAFEWQEDGGQTPVQPTWTRLPQGFKNSPTLSNEALDKDLHEYWVEHPTIVLLQYVDDLMLAVATEKECQEATGDLLQTLGTLGYRASVKKAQIAKQEVTYLGYKIKQGQRWLTQAMKETILQIPEPANPRQVREFLGTVGYCRLWILGFAEKARPLYEGTKENKDWEWTEPMKEAFQELRRALLEAPALVLPDPSKPFQLFVDEKRGIEKGVLTQRWGPWKRPVAYLSKRLDPVAAGWPPCLRMITATTLLVHDADKLTYGQRLLVYTPHAIERVLKQPPGKWISNARLTHYQALLLDTPRIHFQTPCTLNPATLLPNPEENSPLHDCDEILAGVTAMRKDLTDIPLDDSELKWFTDGSSYVKDGQRRAGPTVVDDSGQTIWAXLPLDTSAQKAELIALIQALERAKGKRITIFTDSRYAFGTVHIQRPIYQERGFLTAEGKEIKTLPEIRRLLEAVQMPWAVSIVHVPGHQKGDRPTARGNRAADLAARKVADEDFITPVSCLDPRTHQPSKRXRWMVPRLRRLLDTPAQLGRQLCEHLHLSTHLGKKKTLMLFQTARLRFPQHQTTVKNIVHACKACQQMRPGKGQHAGLRYWGEGPGQHWEIDFTEVRPGKYGYRYLLVLVDTFSGWVEAFPTKGETVMIVAKKILEEIVPRFGLPVTIGSDNGPAFVSQIVQSLALALGTKWKLHCEYSPQSSGQVERMNRTLKETSTKLATETGGDWVTLLPFALLHARNTPYRLNLTPFQILCGRPPPVCPIFEGKKLPPPTLGQFQEALMALSKVHSRVWKLLWEIHVGQNKGTIPSHDIGPGDWVWVKRHQTKALEPKWKGPYVVLLTTPTALKVDGIGPWVHCNHVC
SIO_010081: LOC108633770
subclass of: SO_0000673
so part of: LOC108633770
location: complement(join(<6381492..6382559,6382628..>6384839))
location: region:6381492-6384839:-1
so has part: feature:6382628-6384839:-1:exon
so has part: feature:6381492-6382559:-1:exon

XP_017894839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6382628-6384839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6381492-6382559:-1:exon

SOCS6
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SOCS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7132834..7166819)
location: region:7132834-7166819:-1
so has part: feature:7132834-7166819:-1:exon
subclass of: SO_0000010

102181087
type: Gene
SIO_000068: ncbigene

position:7132834:-1
position: 7132834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7166819:-1
position: 7166819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7132834-7166819:-1:exon

SOCS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SOCS6
product: suppressor of cytokine signaling 6
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_018039754.1
SIO_010081: SOCS6
subclass of: SO_0000673
so part of: SOCS6
location: complement(join(7132834..7138470,7161003..7161193,7166665..7166819))
location: region:7132834-7166819:-1
so has part: feature:7166665-7166819:-1:exon
so has part: feature:7161003-7161193:-1:exon
so has part: feature:7132834-7138470:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7166665-7166819:-1:exon

position:7166665:-1
position: 7166665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7161003-7161193:-1:exon

position:7161003:-1
position: 7161003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7161193:-1
position: 7161193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7132834-7138470:-1:exon

position:7138470:-1
position: 7138470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SOCS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SOCS6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: suppressor of cytokine signaling 6
translation: MKKISLKTFRKSFNLSKSKEDAEFMVVQQPALAGDFGKEESLFGSCYGKEMAGCELHGEDEKGGGKNRAKSESLMGTLKRRLSAKQKAKGKGGAAAGGAADEDTFSSSSAPLVFKDARAPRPMRSTSLRSHHYSPTPWPLRPTASEETCIRMEVRVKALVHSPGAGPALNGVRKDFGELRPAAEPACPCPEPPAAPGSPAPAAGDLRLRLGEHVPVVLGLLPQDYLPYTVPLDGSSPMEVSAVPPPAAGGPCPARRDEDPGRPAPELFGDPPVGGLLAGPAAGMLPSPRAGPDDGPPLSPLLPPLQTDPSQRTFAGLAGPDAHAADSVRCHLNFDPTSAPGVARVYDSVQSSGPLAVTSLTEELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIRDSENGAFCYSRSRLPGSATYPVRLTNPVSRFMQVRSLQYLCRFVIRQYTRIDLIQKLPLPNKMKDYLQEKHY
SIO_010081: SOCS6
subclass of: SO_0000673
so part of: SOCS6
location: complement(7136768..7138341)
location: region:7136768-7138341:-1
so has part: feature:7136768-7138341:-1:exon

XP_017895243.1
type: Protein
SIO_000068: ncbiprotein

position:7136768:-1
position: 7136768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7138341:-1
position: 7138341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7136768-7138341:-1:exon

RTTN
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: RTTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7232114..7339498
location: region:7232114-7339498:1
so has part: feature:7232114-7339498:1:exon
subclass of: SO_0000010

102181353
type: Gene
SIO_000068: ncbigene

position:7232114:1
position: 7232114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7339498:1
position: 7339498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7232114-7339498:1:exon

RTTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RTTN
product: rotatin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_013974305.2
SIO_010081: RTTN
subclass of: SO_0000673
so part of: RTTN
location: join(7232114..7232427,7232753..7232940,7233784..7233961,7235869..7235958,7237980..7238073,7239418..7239532,7240485..7240635,7244738..7244903,7246851..7247029,7249742..7249857,7253111..7253281,7258544..7258756,7259989..7260101,7261853..7261979,7263663..7263788,7264298..7264414,7265234..7265373,7268430..7268601,7270189..7270288,7272250..7272338,7272916..7273033,7274614..7274710,7275333..7275401,7277796..7277984,7278558..7278797,7280018..7280162,7286075..7286229,7287667..7287886,7294257..7294385,7294849..7294959,7296861..7297019,7298176..7298247,7302111..7302300,7303702..7303793,7310372..7310465,7312686..7312878,7314411..7314501,7317647..7317800,7319138..7319275,7319589..7319806,7320320..7320425,7321391..7321488,7323136..7323213,7326847..7326973,7328038..7328240,7331498..7331765,7336685..7336788,7337868..7337937,7339037..7339498)
location: region:7232114-7339498:1
so has part: feature:7232114-7232427:1:exon
so has part: feature:7232753-7232940:1:exon
so has part: feature:7233784-7233961:1:exon
so has part: feature:7235869-7235958:1:exon
so has part: feature:7237980-7238073:1:exon
so has part: feature:7239418-7239532:1:exon
so has part: feature:7240485-7240635:1:exon
so has part: feature:7244738-7244903:1:exon
so has part: feature:7246851-7247029:1:exon
so has part: feature:7249742-7249857:1:exon
so has part: feature:7253111-7253281:1:exon
so has part: feature:7258544-7258756:1:exon
so has part: feature:7259989-7260101:1:exon
so has part: feature:7261853-7261979:1:exon
so has part: feature:7263663-7263788:1:exon
so has part: feature:7264298-7264414:1:exon
so has part: feature:7265234-7265373:1:exon
so has part: feature:7268430-7268601:1:exon
so has part: feature:7270189-7270288:1:exon
so has part: feature:7272250-7272338:1:exon
so has part: feature:7272916-7273033:1:exon
so has part: feature:7274614-7274710:1:exon
so has part: feature:7275333-7275401:1:exon
so has part: feature:7277796-7277984:1:exon
so has part: feature:7278558-7278797:1:exon
so has part: feature:7280018-7280162:1:exon
so has part: feature:7286075-7286229:1:exon
so has part: feature:7287667-7287886:1:exon
so has part: feature:7294257-7294385:1:exon
so has part: feature:7294849-7294959:1:exon
so has part: feature:7296861-7297019:1:exon
so has part: feature:7298176-7298247:1:exon
so has part: feature:7302111-7302300:1:exon
so has part: feature:7303702-7303793:1:exon
so has part: feature:7310372-7310465:1:exon
so has part: feature:7312686-7312878:1:exon
so has part: feature:7314411-7314501:1:exon
so has part: feature:7317647-7317800:1:exon
so has part: feature:7319138-7319275:1:exon
so has part: feature:7319589-7319806:1:exon
so has part: feature:7320320-7320425:1:exon
so has part: feature:7321391-7321488:1:exon
so has part: feature:7323136-7323213:1:exon
so has part: feature:7326847-7326973:1:exon
so has part: feature:7328038-7328240:1:exon
so has part: feature:7331498-7331765:1:exon
so has part: feature:7336685-7336788:1:exon
so has part: feature:7337868-7337937:1:exon
so has part: feature:7339037-7339498:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7232114-7232427:1:exon

position:7232427:1
position: 7232427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7232753-7232940:1:exon

position:7232753:1
position: 7232753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7232940:1
position: 7232940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7233784-7233961:1:exon

position:7233784:1
position: 7233784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7233961:1
position: 7233961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7235869-7235958:1:exon

position:7235869:1
position: 7235869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7235958:1
position: 7235958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7237980-7238073:1:exon

position:7237980:1
position: 7237980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7238073:1
position: 7238073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7239418-7239532:1:exon

position:7239418:1
position: 7239418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7239532:1
position: 7239532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7240485-7240635:1:exon

position:7240485:1
position: 7240485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7240635:1
position: 7240635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7244738-7244903:1:exon

position:7244738:1
position: 7244738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7244903:1
position: 7244903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7246851-7247029:1:exon

position:7246851:1
position: 7246851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7247029:1
position: 7247029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7249742-7249857:1:exon

position:7249742:1
position: 7249742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7249857:1
position: 7249857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7253111-7253281:1:exon

position:7253111:1
position: 7253111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7253281:1
position: 7253281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7258544-7258756:1:exon

position:7258544:1
position: 7258544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7258756:1
position: 7258756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7259989-7260101:1:exon

position:7259989:1
position: 7259989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7260101:1
position: 7260101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7261853-7261979:1:exon

position:7261853:1
position: 7261853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7261979:1
position: 7261979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7263663-7263788:1:exon

position:7263663:1
position: 7263663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7263788:1
position: 7263788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7264298-7264414:1:exon

position:7264298:1
position: 7264298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7264414:1
position: 7264414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7265234-7265373:1:exon

position:7265234:1
position: 7265234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7265373:1
position: 7265373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7268430-7268601:1:exon

position:7268430:1
position: 7268430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7268601:1
position: 7268601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7270189-7270288:1:exon

position:7270189:1
position: 7270189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7270288:1
position: 7270288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7272250-7272338:1:exon

position:7272250:1
position: 7272250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7272338:1
position: 7272338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7272916-7273033:1:exon

position:7272916:1
position: 7272916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7273033:1
position: 7273033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7274614-7274710:1:exon

position:7274614:1
position: 7274614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7274710:1
position: 7274710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7275333-7275401:1:exon

position:7275333:1
position: 7275333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7275401:1
position: 7275401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7277796-7277984:1:exon

position:7277796:1
position: 7277796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7277984:1
position: 7277984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7278558-7278797:1:exon

position:7278558:1
position: 7278558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7278797:1
position: 7278797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7280018-7280162:1:exon

position:7280018:1
position: 7280018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7280162:1
position: 7280162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7286075-7286229:1:exon

position:7286075:1
position: 7286075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7286229:1
position: 7286229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7287667-7287886:1:exon

position:7287667:1
position: 7287667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7287886:1
position: 7287886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:7294257-7294385:1:exon

position:7294257:1
position: 7294257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7294385:1
position: 7294385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:7294849-7294959:1:exon

position:7294849:1
position: 7294849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7294959:1
position: 7294959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:7296861-7297019:1:exon

position:7296861:1
position: 7296861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7297019:1
position: 7297019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:7298176-7298247:1:exon

position:7298176:1
position: 7298176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7298247:1
position: 7298247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:7302111-7302300:1:exon

position:7302111:1
position: 7302111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7302300:1
position: 7302300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:7303702-7303793:1:exon

position:7303702:1
position: 7303702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7303793:1
position: 7303793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:7310372-7310465:1:exon

position:7310372:1
position: 7310372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7310465:1
position: 7310465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:7312686-7312878:1:exon

position:7312686:1
position: 7312686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7312878:1
position: 7312878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:7314411-7314501:1:exon

position:7314411:1
position: 7314411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7314501:1
position: 7314501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:7317647-7317800:1:exon

position:7317647:1
position: 7317647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7317800:1
position: 7317800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:7319138-7319275:1:exon

position:7319138:1
position: 7319138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7319275:1
position: 7319275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:7319589-7319806:1:exon

position:7319589:1
position: 7319589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7319806:1
position: 7319806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:7320320-7320425:1:exon

position:7320320:1
position: 7320320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7320425:1
position: 7320425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:7321391-7321488:1:exon

position:7321391:1
position: 7321391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7321488:1
position: 7321488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:7323136-7323213:1:exon

position:7323136:1
position: 7323136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7323213:1
position: 7323213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:7326847-7326973:1:exon

position:7326847:1
position: 7326847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7326973:1
position: 7326973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:7328038-7328240:1:exon

position:7328038:1
position: 7328038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7328240:1
position: 7328240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:7331498-7331765:1:exon

position:7331498:1
position: 7331498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7331765:1
position: 7331765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:7336685-7336788:1:exon

position:7336685:1
position: 7336685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7336788:1
position: 7336788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:7337868-7337937:1:exon

position:7337868:1
position: 7337868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7337937:1
position: 7337937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:7339037-7339498:1:exon

position:7339037:1
position: 7339037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RTTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RTTN
product: rotatin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_013974306.2
SIO_010081: RTTN
subclass of: SO_0000673
so part of: RTTN
location: join(7232114..7232427,7232753..7232940,7233784..7233961,7235869..7235958,7237983..7238073,7239418..7239532,7240485..7240635,7244738..7244903,7246851..7247029,7249742..7249857,7253111..7253281,7258544..7258756,7259989..7260101,7261853..7261979,7263663..7263788,7264298..7264414,7265234..7265373,7268430..7268601,7270189..7270288,7272250..7272338,7272916..7273033,7274614..7274710,7275333..7275401,7277796..7277984,7278558..7278797,7280018..7280162,7286075..7286229,7287667..7287886,7294257..7294385,7294849..7294959,7296861..7297019,7298176..7298247,7302111..7302300,7303702..7303793,7310372..7310465,7312686..7312878,7314411..7314501,7317647..7317800,7319138..7319275,7319589..7319806,7320320..7320425,7321391..7321488,7323136..7323213,7326847..7326973,7328038..7328240,7331498..7331765,7336685..7336788,7337868..7337937,7339037..7339498)
location: region:7232114-7339498:1
so has part: feature:7232114-7232427:1:exon
so has part: feature:7232753-7232940:1:exon
so has part: feature:7233784-7233961:1:exon
so has part: feature:7235869-7235958:1:exon
so has part: feature:7237983-7238073:1:exon
so has part: feature:7239418-7239532:1:exon
so has part: feature:7240485-7240635:1:exon
so has part: feature:7244738-7244903:1:exon
so has part: feature:7246851-7247029:1:exon
so has part: feature:7249742-7249857:1:exon
so has part: feature:7253111-7253281:1:exon
so has part: feature:7258544-7258756:1:exon
so has part: feature:7259989-7260101:1:exon
so has part: feature:7261853-7261979:1:exon
so has part: feature:7263663-7263788:1:exon
so has part: feature:7264298-7264414:1:exon
so has part: feature:7265234-7265373:1:exon
so has part: feature:7268430-7268601:1:exon
so has part: feature:7270189-7270288:1:exon
so has part: feature:7272250-7272338:1:exon
so has part: feature:7272916-7273033:1:exon
so has part: feature:7274614-7274710:1:exon
so has part: feature:7275333-7275401:1:exon
so has part: feature:7277796-7277984:1:exon
so has part: feature:7278558-7278797:1:exon
so has part: feature:7280018-7280162:1:exon
so has part: feature:7286075-7286229:1:exon
so has part: feature:7287667-7287886:1:exon
so has part: feature:7294257-7294385:1:exon
so has part: feature:7294849-7294959:1:exon
so has part: feature:7296861-7297019:1:exon
so has part: feature:7298176-7298247:1:exon
so has part: feature:7302111-7302300:1:exon
so has part: feature:7303702-7303793:1:exon
so has part: feature:7310372-7310465:1:exon
so has part: feature:7312686-7312878:1:exon
so has part: feature:7314411-7314501:1:exon
so has part: feature:7317647-7317800:1:exon
so has part: feature:7319138-7319275:1:exon
so has part: feature:7319589-7319806:1:exon
so has part: feature:7320320-7320425:1:exon
so has part: feature:7321391-7321488:1:exon
so has part: feature:7323136-7323213:1:exon
so has part: feature:7326847-7326973:1:exon
so has part: feature:7328038-7328240:1:exon
so has part: feature:7331498-7331765:1:exon
so has part: feature:7336685-7336788:1:exon
so has part: feature:7337868-7337937:1:exon
so has part: feature:7339037-7339498:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7232114-7232427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7232753-7232940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7233784-7233961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7235869-7235958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7237983-7238073:1:exon

position:7237983:1
position: 7237983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7239418-7239532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7240485-7240635:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7244738-7244903:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7246851-7247029:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7249742-7249857:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7253111-7253281:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7258544-7258756:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7259989-7260101:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7261853-7261979:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7263663-7263788:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7264298-7264414:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7265234-7265373:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7268430-7268601:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7270189-7270288:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7272250-7272338:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7272916-7273033:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7274614-7274710:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7275333-7275401:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7277796-7277984:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7278558-7278797:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7280018-7280162:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7286075-7286229:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7287667-7287886:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7294257-7294385:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7294849-7294959:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7296861-7297019:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7298176-7298247:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7302111-7302300:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7303702-7303793:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7310372-7310465:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7312686-7312878:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7314411-7314501:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7317647-7317800:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7319138-7319275:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:7319589-7319806:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:7320320-7320425:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:7321391-7321488:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:7323136-7323213:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:7326847-7326973:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:7328038-7328240:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:7331498-7331765:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:7336685-7336788:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:7337868-7337937:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:7339037-7339498:1:exon

RTTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RTTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rotatin isoform X1
translation: MVLTGLIRKLGHPLAEIRERALRSILCKLEHSLVRGADLASHRLLFLHLLEWFNFPSVPMKDEVLGLLSRLVKYPPAVQHLVDLGAVEFLSKLRPNVEPNLQAEIDGILDGLFSLPSEVPETYSSSYQTSQTDLLHQPEILTGYFPQEKSTLQQTEIPSRPVAANRTAKCLKFSTFPWLPLTAADRHVLSSNESSLRSSNHTVIWNSCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKLAFGGDGKHRLALQSVSCLQQLCTCLRNRLNFHRDPSFFSNKQDAVSQNSSLSYCPDARAAPHSQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVSSRVSAPSPLDLAPVDLPELAEDTLELQLQQLSLPQLCVSLLEAATPLLRTGSRQMIIRVLELLAEVLVLIGEAISAHLWDDSSLFAIDMKEKLLVVVASLGDTMCYHKSSVSLEQPEALVVHHRMAFVSISLFAVRLLQTLLPVEKASRFLPEPMSAALFFISLDMPVSLEYPDIHEAVVAYLEQLNSENYSIYKRTAEAAYSIECTCNFLSDVGKEGEKNLLELVELADQALRSFSYHQHFPLIKEIISICSKIWKSVQASPLLQGESQKVFLRMLSHPLLQVKVETYHCCLEIVKECLGIHSISKPVSSLCNGIHFLLHPKVLYEISAFGIQEPKNEVSAAAKAILVHLLQGRLRVTAPTWNKFIESLCPVIPVLQGYADTEDPLGKCILHLSRESPETDEGVLPSAARLKSMLRLLLVKKPSVRVLALKLLASYLTREEGADTKRPSIDARVLSRVTNLFIVKKPIELKLDDRRELMIKLETVEKVYEIFVSDDIDLVLRKSAAEQLVVIMQDIKMHAVVKKLHLVDKIIEYLSECVGQDGEVVECLAQPSLTLLRKVLCADPVLRVSLSQQTSVLTLLFRVSLIFHEDCTIVTEVGALFCLLLFDEVSRMDMWSESPSCTPSSPSVFSLPVSVSRRYHLPVHVLGHHAVSPYSMVLPLSADSLALKPVSDMLRMAWNLSWYHGSDSVLKQVNSEAEIQEFLDTLKLSTEDTLTLKMTHTPSGLKDCLRSIVQAAGHREVRAALTRMSFYLLNDRLSFKGGTGPCGVTLKSLSWHTTLSRFLQVLPACTEDEKLLIDIIHFLSKLLKEQRKNVPVELLNWLLELLLRQSPNPLLDLLVLTESQTQEETDDVRTAVRQQLQKELMALFSTLLLSFEAVTDRKCLELFYVFQTQLALKLLQCLRVTDAPHFYGLPSLERTLRGMAHLTACPGWSAHSPLTKPLDICGKYLSGLLEVITSFYVERGGNAMSFMGKGVTKSTVLCLLHLSHEMMVQAQSSEWMSLWFLPLGSQSEDHAPTQQGLAWLIPLWVDRDPEVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFIFQNLLVIPMPSVILKDYTWQGPCVHDEDSGLSLIGKPALQALLYHCHFYEHLNQMVKHCYLGRYAFDFSFSALNGAPEGNDLNGLDDSFKFWRAPSRMSSQDRDPSSLSTSETMVAASSGSAEFQSLMLSMVPHPEVIHDQLVAQGQREAASPRLPPDSPLSAPLPRQCVFVTPPLLSAMCSLLDSLLVATPGDTASAFRRTRLIELLCSIADATLLETSVQELRALLPTSLPAEHTQAQVSFLLEYLSSLSRLLQSCLLVDPDLVIQDELLKPLIPNLIQVLTLCTKDILDVELTSAFYQTWTHLFHLLAALLRRAGPASFPSVTMGLARSWAAVIDAFCRCACLSATSPALYTASLQFLSILLTEEAKRHLQDKDKASFCHNPTVASLLDKTQESQNSLERLTEVILQCYEGKTSKDVLKRVAANALMSLLAVSRKAQRHALKAHLVDSCVEQMKHIHAQLNLGSLKPGRAALKKKEDGFIKELSIAMQLLRNCLYQNEECKEAALDAHLVPVLHALWPWLLMDDSLMQVALQLLCVYTANFPNGCSSLCWSSYGQHP…
SIO_010081: RTTN
subclass of: SO_0000673
so part of: RTTN
location: join(7232397..7232427,7232753..7232940,7233784..7233961,7235869..7235958,7237980..7238073,7239418..7239532,7240485..7240635,7244738..7244903,7246851..7247029,7249742..7249857,7253111..7253281,7258544..7258756,7259989..7260101,7261853..7261979,7263663..7263788,7264298..7264414,7265234..7265373,7268430..7268601,7270189..7270288,7272250..7272338,7272916..7273033,7274614..7274710,7275333..7275401,7277796..7277984,7278558..7278797,7280018..7280162,7286075..7286229,7287667..7287886,7294257..7294385,7294849..7294959,7296861..7297019,7298176..7298247,7302111..7302300,7303702..7303793,7310372..7310465,7312686..7312878,7314411..7314501,7317647..7317800,7319138..7319275,7319589..7319806,7320320..7320425,7321391..7321488,7323136..7323213,7326847..7326973,7328038..7328240,7331498..7331765,7336685..7336788,7337868..7337937,7339037..7339122)
location: region:7232397-7339122:1
so has part: feature:7232397-7232427:1:exon
so has part: feature:7232753-7232940:1:exon
so has part: feature:7233784-7233961:1:exon
so has part: feature:7235869-7235958:1:exon
so has part: feature:7237980-7238073:1:exon
so has part: feature:7239418-7239532:1:exon
so has part: feature:7240485-7240635:1:exon
so has part: feature:7244738-7244903:1:exon
so has part: feature:7246851-7247029:1:exon
so has part: feature:7249742-7249857:1:exon
so has part: feature:7253111-7253281:1:exon
so has part: feature:7258544-7258756:1:exon
so has part: feature:7259989-7260101:1:exon
so has part: feature:7261853-7261979:1:exon
so has part: feature:7263663-7263788:1:exon
so has part: feature:7264298-7264414:1:exon
so has part: feature:7265234-7265373:1:exon
so has part: feature:7268430-7268601:1:exon
so has part: feature:7270189-7270288:1:exon
so has part: feature:7272250-7272338:1:exon
so has part: feature:7272916-7273033:1:exon
so has part: feature:7274614-7274710:1:exon
so has part: feature:7275333-7275401:1:exon
so has part: feature:7277796-7277984:1:exon
so has part: feature:7278558-7278797:1:exon
so has part: feature:7280018-7280162:1:exon
so has part: feature:7286075-7286229:1:exon
so has part: feature:7287667-7287886:1:exon
so has part: feature:7294257-7294385:1:exon
so has part: feature:7294849-7294959:1:exon
so has part: feature:7296861-7297019:1:exon
so has part: feature:7298176-7298247:1:exon
so has part: feature:7302111-7302300:1:exon
so has part: feature:7303702-7303793:1:exon
so has part: feature:7310372-7310465:1:exon
so has part: feature:7312686-7312878:1:exon
so has part: feature:7314411-7314501:1:exon
so has part: feature:7317647-7317800:1:exon
so has part: feature:7319138-7319275:1:exon
so has part: feature:7319589-7319806:1:exon
so has part: feature:7320320-7320425:1:exon
so has part: feature:7321391-7321488:1:exon
so has part: feature:7323136-7323213:1:exon
so has part: feature:7326847-7326973:1:exon
so has part: feature:7328038-7328240:1:exon
so has part: feature:7331498-7331765:1:exon
so has part: feature:7336685-7336788:1:exon
so has part: feature:7337868-7337937:1:exon
so has part: feature:7339037-7339122:1:exon

XP_013829759.2
type: Protein
SIO_000068: ncbiprotein

position:7232397:1
position: 7232397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7339122:1
position: 7339122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7232397-7232427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7232753-7232940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7233784-7233961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7235869-7235958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7237980-7238073:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7239418-7239532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7240485-7240635:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7244738-7244903:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7246851-7247029:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7249742-7249857:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7253111-7253281:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7258544-7258756:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7259989-7260101:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7261853-7261979:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7263663-7263788:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7264298-7264414:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7265234-7265373:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7268430-7268601:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7270189-7270288:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7272250-7272338:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7272916-7273033:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7274614-7274710:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7275333-7275401:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7277796-7277984:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7278558-7278797:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7280018-7280162:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7286075-7286229:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7287667-7287886:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7294257-7294385:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7294849-7294959:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7296861-7297019:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7298176-7298247:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7302111-7302300:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7303702-7303793:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7310372-7310465:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7312686-7312878:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7314411-7314501:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7317647-7317800:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7319138-7319275:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:7319589-7319806:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:7320320-7320425:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:7321391-7321488:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:7323136-7323213:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:7326847-7326973:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:7328038-7328240:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:7331498-7331765:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:7336685-7336788:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:7337868-7337937:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:7339037-7339122:1:exon

RTTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RTTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rotatin isoform X2
translation: MVLTGLIRKLGHPLAEIRERALRSILCKLEHSLVRGADLASHRLLFLHLLEWFNFPSVPMKDEVLGLLSRLVKYPPAVQHLVDLGAVEFLSKLRPNVEPNLQAEIDGILDGLFSLPSEVPETYSSSYQTSQTDLLHQPEILTGYFPQEKSTLQQTEIPSRPVANRTAKCLKFSTFPWLPLTAADRHVLSSNESSLRSSNHTVIWNSCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKLAFGGDGKHRLALQSVSCLQQLCTCLRNRLNFHRDPSFFSNKQDAVSQNSSLSYCPDARAAPHSQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVSSRVSAPSPLDLAPVDLPELAEDTLELQLQQLSLPQLCVSLLEAATPLLRTGSRQMIIRVLELLAEVLVLIGEAISAHLWDDSSLFAIDMKEKLLVVVASLGDTMCYHKSSVSLEQPEALVVHHRMAFVSISLFAVRLLQTLLPVEKASRFLPEPMSAALFFISLDMPVSLEYPDIHEAVVAYLEQLNSENYSIYKRTAEAAYSIECTCNFLSDVGKEGEKNLLELVELADQALRSFSYHQHFPLIKEIISICSKIWKSVQASPLLQGESQKVFLRMLSHPLLQVKVETYHCCLEIVKECLGIHSISKPVSSLCNGIHFLLHPKVLYEISAFGIQEPKNEVSAAAKAILVHLLQGRLRVTAPTWNKFIESLCPVIPVLQGYADTEDPLGKCILHLSRESPETDEGVLPSAARLKSMLRLLLVKKPSVRVLALKLLASYLTREEGADTKRPSIDARVLSRVTNLFIVKKPIELKLDDRRELMIKLETVEKVYEIFVSDDIDLVLRKSAAEQLVVIMQDIKMHAVVKKLHLVDKIIEYLSECVGQDGEVVECLAQPSLTLLRKVLCADPVLRVSLSQQTSVLTLLFRVSLIFHEDCTIVTEVGALFCLLLFDEVSRMDMWSESPSCTPSSPSVFSLPVSVSRRYHLPVHVLGHHAVSPYSMVLPLSADSLALKPVSDMLRMAWNLSWYHGSDSVLKQVNSEAEIQEFLDTLKLSTEDTLTLKMTHTPSGLKDCLRSIVQAAGHREVRAALTRMSFYLLNDRLSFKGGTGPCGVTLKSLSWHTTLSRFLQVLPACTEDEKLLIDIIHFLSKLLKEQRKNVPVELLNWLLELLLRQSPNPLLDLLVLTESQTQEETDDVRTAVRQQLQKELMALFSTLLLSFEAVTDRKCLELFYVFQTQLALKLLQCLRVTDAPHFYGLPSLERTLRGMAHLTACPGWSAHSPLTKPLDICGKYLSGLLEVITSFYVERGGNAMSFMGKGVTKSTVLCLLHLSHEMMVQAQSSEWMSLWFLPLGSQSEDHAPTQQGLAWLIPLWVDRDPEVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFIFQNLLVIPMPSVILKDYTWQGPCVHDEDSGLSLIGKPALQALLYHCHFYEHLNQMVKHCYLGRYAFDFSFSALNGAPEGNDLNGLDDSFKFWRAPSRMSSQDRDPSSLSTSETMVAASSGSAEFQSLMLSMVPHPEVIHDQLVAQGQREAASPRLPPDSPLSAPLPRQCVFVTPPLLSAMCSLLDSLLVATPGDTASAFRRTRLIELLCSIADATLLETSVQELRALLPTSLPAEHTQAQVSFLLEYLSSLSRLLQSCLLVDPDLVIQDELLKPLIPNLIQVLTLCTKDILDVELTSAFYQTWTHLFHLLAALLRRAGPASFPSVTMGLARSWAAVIDAFCRCACLSATSPALYTASLQFLSILLTEEAKRHLQDKDKASFCHNPTVASLLDKTQESQNSLERLTEVILQCYEGKTSKDVLKRVAANALMSLLAVSRKAQRHALKAHLVDSCVEQMKHIHAQLNLGSLKPGRAALKKKEDGFIKELSIAMQLLRNCLYQNEECKEAALDAHLVPVLHALWPWLLMDDSLMQVALQLLCVYTANFPNGCSSLCWSSYGQHPV…
SIO_010081: RTTN
subclass of: SO_0000673
so part of: RTTN
location: join(7232397..7232427,7232753..7232940,7233784..7233961,7235869..7235958,7237983..7238073,7239418..7239532,7240485..7240635,7244738..7244903,7246851..7247029,7249742..7249857,7253111..7253281,7258544..7258756,7259989..7260101,7261853..7261979,7263663..7263788,7264298..7264414,7265234..7265373,7268430..7268601,7270189..7270288,7272250..7272338,7272916..7273033,7274614..7274710,7275333..7275401,7277796..7277984,7278558..7278797,7280018..7280162,7286075..7286229,7287667..7287886,7294257..7294385,7294849..7294959,7296861..7297019,7298176..7298247,7302111..7302300,7303702..7303793,7310372..7310465,7312686..7312878,7314411..7314501,7317647..7317800,7319138..7319275,7319589..7319806,7320320..7320425,7321391..7321488,7323136..7323213,7326847..7326973,7328038..7328240,7331498..7331765,7336685..7336788,7337868..7337937,7339037..7339122)
location: region:7232397-7339122:1
so has part: feature:7232397-7232427:1:exon
so has part: feature:7232753-7232940:1:exon
so has part: feature:7233784-7233961:1:exon
so has part: feature:7235869-7235958:1:exon
so has part: feature:7237983-7238073:1:exon
so has part: feature:7239418-7239532:1:exon
so has part: feature:7240485-7240635:1:exon
so has part: feature:7244738-7244903:1:exon
so has part: feature:7246851-7247029:1:exon
so has part: feature:7249742-7249857:1:exon
so has part: feature:7253111-7253281:1:exon
so has part: feature:7258544-7258756:1:exon
so has part: feature:7259989-7260101:1:exon
so has part: feature:7261853-7261979:1:exon
so has part: feature:7263663-7263788:1:exon
so has part: feature:7264298-7264414:1:exon
so has part: feature:7265234-7265373:1:exon
so has part: feature:7268430-7268601:1:exon
so has part: feature:7270189-7270288:1:exon
so has part: feature:7272250-7272338:1:exon
so has part: feature:7272916-7273033:1:exon
so has part: feature:7274614-7274710:1:exon
so has part: feature:7275333-7275401:1:exon
so has part: feature:7277796-7277984:1:exon
so has part: feature:7278558-7278797:1:exon
so has part: feature:7280018-7280162:1:exon
so has part: feature:7286075-7286229:1:exon
so has part: feature:7287667-7287886:1:exon
so has part: feature:7294257-7294385:1:exon
so has part: feature:7294849-7294959:1:exon
so has part: feature:7296861-7297019:1:exon
so has part: feature:7298176-7298247:1:exon
so has part: feature:7302111-7302300:1:exon
so has part: feature:7303702-7303793:1:exon
so has part: feature:7310372-7310465:1:exon
so has part: feature:7312686-7312878:1:exon
so has part: feature:7314411-7314501:1:exon
so has part: feature:7317647-7317800:1:exon
so has part: feature:7319138-7319275:1:exon
so has part: feature:7319589-7319806:1:exon
so has part: feature:7320320-7320425:1:exon
so has part: feature:7321391-7321488:1:exon
so has part: feature:7323136-7323213:1:exon
so has part: feature:7326847-7326973:1:exon
so has part: feature:7328038-7328240:1:exon
so has part: feature:7331498-7331765:1:exon
so has part: feature:7336685-7336788:1:exon
so has part: feature:7337868-7337937:1:exon
so has part: feature:7339037-7339122:1:exon

XP_013829760.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7232397-7232427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7232753-7232940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7233784-7233961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7235869-7235958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7237983-7238073:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7239418-7239532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7240485-7240635:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7244738-7244903:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7246851-7247029:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7249742-7249857:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7253111-7253281:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7258544-7258756:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7259989-7260101:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7261853-7261979:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7263663-7263788:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7264298-7264414:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7265234-7265373:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7268430-7268601:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7270189-7270288:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7272250-7272338:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7272916-7273033:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7274614-7274710:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7275333-7275401:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7277796-7277984:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7278558-7278797:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7280018-7280162:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7286075-7286229:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7287667-7287886:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7294257-7294385:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7294849-7294959:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7296861-7297019:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7298176-7298247:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7302111-7302300:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7303702-7303793:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7310372-7310465:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7312686-7312878:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7314411-7314501:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7317647-7317800:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7319138-7319275:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:7319589-7319806:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:7320320-7320425:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:7321391-7321488:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:7323136-7323213:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:7326847-7326973:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:7328038-7328240:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:7331498-7331765:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:7336685-7336788:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:7337868-7337937:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:7339037-7339122:1:exon

CD226
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CD226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7405489..7496146
location: region:7405489-7496146:1
so has part: feature:7405489-7496146:1:exon
subclass of: SO_0000010

102168222
type: Gene
SIO_000068: ncbigene

position:7405489:1
position: 7405489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7496146:1
position: 7496146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7405489-7496146:1:exon

CD226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CD226
product: CD226 molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005696957.3
SIO_010081: CD226
subclass of: SO_0000673
so part of: CD226
location: join(7405489..7406068,7410779..7410943,7411252..7411587,7465209..7465556,7486955..7487054,7492408..7492465,7495311..7496146)
location: region:7405489-7496146:1
so has part: feature:7405489-7406068:1:exon
so has part: feature:7410779-7410943:1:exon
so has part: feature:7411252-7411587:1:exon
so has part: feature:7465209-7465556:1:exon
so has part: feature:7486955-7487054:1:exon
so has part: feature:7492408-7492465:1:exon
so has part: feature:7495311-7496146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7405489-7406068:1:exon

position:7406068:1
position: 7406068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7410779-7410943:1:exon

position:7410779:1
position: 7410779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7410943:1
position: 7410943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7411252-7411587:1:exon

position:7411252:1
position: 7411252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7411587:1
position: 7411587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7465209-7465556:1:exon

position:7465209:1
position: 7465209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7465556:1
position: 7465556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7486955-7487054:1:exon

position:7486955:1
position: 7486955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7487054:1
position: 7487054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7492408-7492465:1:exon

position:7492408:1
position: 7492408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7492465:1
position: 7492465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7495311-7496146:1:exon

position:7495311:1
position: 7495311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CD226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD226 antigen
translation: MDRLTLLLAILYVYTAPCEEIFWDTTVKLAKNMTLACVYPLADTVTQTEWFKIKTERESMAIFNPAYHGIVREAYVDRVYFSNHTMTSHDMTLSFHNASEVDVGFYSCFLHTFPHGTWQKVIRVVPPDNFEDAGPPNSQMVSEPGKNVTLTCEPRENLLLEEVSWEKIQPQQTDLLISCNVSQGRSYTSKYPRQILSNCNKDMKKAFVTIPNVIGSDSGLYRCGFKASPGEKETFVIRLTVTDGETKNTYIPFVAGGAVLLLLLVLITTITVITYKRRKRQQKRGLFKDFWITQNRATNNYRNPFPPNPPSGGAGEDIYVNHPVFCLGPRARV
SIO_010081: CD226
subclass of: SO_0000673
so part of: CD226
location: join(7410898..7410943,7411252..7411587,7465209..7465556,7486955..7487054,7492408..7492465,7495311..7495424)
location: region:7410898-7495424:1
so has part: feature:7410898-7410943:1:exon
so has part: feature:7411252-7411587:1:exon
so has part: feature:7465209-7465556:1:exon
so has part: feature:7486955-7487054:1:exon
so has part: feature:7492408-7492465:1:exon
so has part: feature:7495311-7495424:1:exon

XP_005697014.2
type: Protein
SIO_000068: ncbiprotein

position:7410898:1
position: 7410898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7495424:1
position: 7495424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7410898-7410943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7411252-7411587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7465209-7465556:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7486955-7487054:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7492408-7492465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7495311-7495424:1:exon

DOK6
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: DOK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7512666..7922613)
location: region:7512666-7922613:-1
so has part: feature:7512666-7922613:-1:exon
subclass of: SO_0000010

102168503
type: Gene
SIO_000068: ncbigene

position:7512666:-1
position: 7512666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7922613:-1
position: 7922613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7512666-7922613:-1:exon

DOK6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: DOK6
product: docking protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_018039636.1
SIO_010081: DOK6
subclass of: SO_0000673
so part of: DOK6
location: complement(join(7512666..7520441,7593623..7593740,7608050..7608188,7664840..7665029,7676683..7676802,7750537..7750651,7788455..7788562,7922421..7922613))
location: region:7512666-7922613:-1
so has part: feature:7922421-7922613:-1:exon
so has part: feature:7788455-7788562:-1:exon
so has part: feature:7750537-7750651:-1:exon
so has part: feature:7676683-7676802:-1:exon
so has part: feature:7664840-7665029:-1:exon
so has part: feature:7608050-7608188:-1:exon
so has part: feature:7593623-7593740:-1:exon
so has part: feature:7512666-7520441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7922421-7922613:-1:exon

position:7922421:-1
position: 7922421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7788455-7788562:-1:exon

position:7788455:-1
position: 7788455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7788562:-1
position: 7788562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7750537-7750651:-1:exon

position:7750537:-1
position: 7750537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7750651:-1
position: 7750651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7676683-7676802:-1:exon

position:7676683:-1
position: 7676683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7676802:-1
position: 7676802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7664840-7665029:-1:exon

position:7664840:-1
position: 7664840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7665029:-1
position: 7665029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7608050-7608188:-1:exon

position:7608050:-1
position: 7608050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7608188:-1
position: 7608188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7593623-7593740:-1:exon

position:7593623:-1
position: 7593623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7593740:-1
position: 7593740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7512666-7520441:-1:exon

position:7520441:-1
position: 7520441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DOK6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: DOK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: docking protein 6
translation: MASNFNDIVKQGYVKIRSRKLGIFRRCWLVFKKASSKGPRRLEKFPDEKAAYFRNFHKVTELHNIKNITRLPRETKKHAVAIIFHDETSKTFACESELEAEEWCKHLCMECLGTRLNDISLGEPDLLAAGVQREQNERFNVYLMPTPNLDIYGECTMQITHENIYLWDIHNAKVKLVMWPLSSLRRYGRDSTWFTFESGRMCDTGEGLFTFQTREGEMIYQKVHSATLAIAEQHERLMLEMEQKARLQTSLTEPMTLSKSISLPRSAYWHHITRQSSVGEIYSLQGHGFGPSKMSRAQTFPSYASEQSEETQPALSRSSSYGFSYSSSLIQ
SIO_010081: DOK6
subclass of: SO_0000673
so part of: DOK6
location: complement(join(7520302..7520441,7593623..7593740,7608050..7608188,7664840..7665029,7676683..7676802,7750537..7750651,7788455..7788562,7922421..7922486))
location: region:7520302-7922486:-1
so has part: feature:7922421-7922486:-1:exon
so has part: feature:7788455-7788562:-1:exon
so has part: feature:7750537-7750651:-1:exon
so has part: feature:7676683-7676802:-1:exon
so has part: feature:7664840-7665029:-1:exon
so has part: feature:7608050-7608188:-1:exon
so has part: feature:7593623-7593740:-1:exon
so has part: feature:7520302-7520441:-1:exon

XP_017895125.1
type: Protein
SIO_000068: ncbiprotein

position:7520302:-1
position: 7520302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7922486:-1
position: 7922486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7922421-7922486:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7788455-7788562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7750537-7750651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7676683-7676802:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7664840-7665029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7608050-7608188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7593623-7593740:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7520302-7520441:-1:exon

CCDC102B
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CCDC102B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8266081..8523691)
location: region:8266081-8523691:-1
so has part: feature:8266081-8523691:-1:exon
subclass of: SO_0000010

102168784
type: Gene
SIO_000068: ncbigene

position:8266081:-1
position: 8266081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8523691:-1
position: 8523691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8266081-8523691:-1:exon

CCDC102B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CCDC102B
product: coiled-coil domain containing 102B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005696959.3
SIO_010081: CCDC102B
subclass of: SO_0000673
so part of: CCDC102B
location: complement(join(8266081..8266582,8298226..8298396,8408810..8409019,8430807..8430923,8455202..8455310,8466318..8466538,8467896..8468505,8523544..8523691))
location: region:8266081-8523691:-1
so has part: feature:8523544-8523691:-1:exon
so has part: feature:8467896-8468505:-1:exon
so has part: feature:8466318-8466538:-1:exon
so has part: feature:8455202-8455310:-1:exon
so has part: feature:8430807-8430923:-1:exon
so has part: feature:8408810-8409019:-1:exon
so has part: feature:8298226-8298396:-1:exon
so has part: feature:8266081-8266582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8523544-8523691:-1:exon

position:8523544:-1
position: 8523544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8467896-8468505:-1:exon

position:8467896:-1
position: 8467896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8468505:-1
position: 8468505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8466318-8466538:-1:exon

position:8466318:-1
position: 8466318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8466538:-1
position: 8466538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8455202-8455310:-1:exon

position:8455202:-1
position: 8455202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8455310:-1
position: 8455310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8430807-8430923:-1:exon

position:8430807:-1
position: 8430807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8430923:-1
position: 8430923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8408810-8409019:-1:exon

position:8408810:-1
position: 8408810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8409019:-1
position: 8409019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8298226-8298396:-1:exon

position:8298226:-1
position: 8298226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8298396:-1
position: 8298396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8266081-8266582:-1:exon

position:8266582:-1
position: 8266582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC102B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CCDC102B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 102B
translation: MNLDSIHRLIEETHLFGMQQSGLVRSSCDLAAPAPARGDPRSSCPSPLGPQSPAALSGHAPSWSTSEWDIGAELRLRELEEVKARAAQMEKTMRWWSDCTANWREKWSKVRAERNSAREEGRQLRIKLDMAVKELSALKKKPPLPHPAEATQDRKLPGFPEVARAQRDPLQIGSKTCESIRECLGKREFPTKENANSKEGSLIIDPLKLSEEMKLSLDCPDLFKNGVSENCTVRPGLRLQAINLPLENEVPEISALQGHLDDFQKVLWKEREMRLSLEKEIERLESALSVWKWKYEELKESKAKSLKQFDILHGQHKNEMEEVSGLIREESKSQNSNDRVVYELRAELERLQAENTSEWDKRELLEKEKQGLERENRRLKVQVKEMEELLQRRNRLSENAEGPDFKTSGVEPQEKNKELVDLQHAYCKLSRQYQAKTAELTRANNLVDQNEAEVKKLRLQVEELKWGLNQKEDKLDDFLNQIHKLQRSLNEQKETNGNLEVKLRQLQNW
SIO_010081: CCDC102B
subclass of: SO_0000673
so part of: CCDC102B
location: complement(join(8266475..8266582,8298226..8298396,8408810..8409019,8430807..8430923,8455202..8455310,8466318..8466538,8467896..8468489))
location: region:8266475-8468489:-1
so has part: feature:8467896-8468489:-1:exon
so has part: feature:8466318-8466538:-1:exon
so has part: feature:8455202-8455310:-1:exon
so has part: feature:8430807-8430923:-1:exon
so has part: feature:8408810-8409019:-1:exon
so has part: feature:8298226-8298396:-1:exon
so has part: feature:8266475-8266582:-1:exon

XP_005697016.1
type: Protein
SIO_000068: ncbiprotein

position:8266475:-1
position: 8266475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8468489:-1
position: 8468489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8467896-8468489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8466318-8466538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8455202-8455310:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8430807-8430923:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8408810-8409019:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8298226-8298396:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8266475-8266582:-1:exon

TMX3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TMX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8575579..8613664
location: region:8575579-8613664:1
so has part: feature:8575579-8613664:1:exon
subclass of: SO_0000010

102181645
type: Gene
SIO_000068: ncbigene

position:8575579:1
position: 8575579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8613664:1
position: 8613664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8575579-8613664:1:exon

TMX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TMX3
product: thioredoxin related transmembrane protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 58 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_018039694.1
SIO_010081: TMX3
subclass of: SO_0000673
so part of: TMX3
location: join(8575579..8575742,8576643..8576697,8579996..8580035,8581261..8581384,8588568..8588613,8589880..8589960,8591972..8592071,8592737..8592814,8595569..8595635,8597058..8597156,8599206..8599263,8599463..8599516,8602898..8602954,8607419..8607548,8608739..8608807,8610231..8613664)
location: region:8575579-8613664:1
so has part: feature:8575579-8575742:1:exon
so has part: feature:8576643-8576697:1:exon
so has part: feature:8579996-8580035:1:exon
so has part: feature:8581261-8581384:1:exon
so has part: feature:8588568-8588613:1:exon
so has part: feature:8589880-8589960:1:exon
so has part: feature:8591972-8592071:1:exon
so has part: feature:8592737-8592814:1:exon
so has part: feature:8595569-8595635:1:exon
so has part: feature:8597058-8597156:1:exon
so has part: feature:8599206-8599263:1:exon
so has part: feature:8599463-8599516:1:exon
so has part: feature:8602898-8602954:1:exon
so has part: feature:8607419-8607548:1:exon
so has part: feature:8608739-8608807:1:exon
so has part: feature:8610231-8613664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8575579-8575742:1:exon

position:8575742:1
position: 8575742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8576643-8576697:1:exon

position:8576643:1
position: 8576643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8576697:1
position: 8576697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8579996-8580035:1:exon

position:8579996:1
position: 8579996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8580035:1
position: 8580035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8581261-8581384:1:exon

position:8581261:1
position: 8581261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8581384:1
position: 8581384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8588568-8588613:1:exon

position:8588568:1
position: 8588568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8588613:1
position: 8588613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8589880-8589960:1:exon

position:8589880:1
position: 8589880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8589960:1
position: 8589960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8591972-8592071:1:exon

position:8591972:1
position: 8591972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8592071:1
position: 8592071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8592737-8592814:1:exon

position:8592737:1
position: 8592737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8592814:1
position: 8592814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8595569-8595635:1:exon

position:8595569:1
position: 8595569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8595635:1
position: 8595635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8597058-8597156:1:exon

position:8597058:1
position: 8597058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8597156:1
position: 8597156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8599206-8599263:1:exon

position:8599206:1
position: 8599206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8599263:1
position: 8599263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8599463-8599516:1:exon

position:8599463:1
position: 8599463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8599516:1
position: 8599516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8602898-8602954:1:exon

position:8602898:1
position: 8602898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8602954:1
position: 8602954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8607419-8607548:1:exon

position:8607419:1
position: 8607419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8607548:1
position: 8607548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8608739-8608807:1:exon

position:8608739:1
position: 8608739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8608807:1
position: 8608807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8610231-8613664:1:exon

position:8610231:1
position: 8610231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TMX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein disulfide-isomerase TMX3
translation: MASWRRGPALRLWAAVFLLDLAFCKGQVEDLDDSFKENRKDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKGDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFEHMQKRHRVFFVYIGGESPLKEKYIDAASELIVYTYFFSASEEVVPAYVTLKEMPAVLVFKDETYFVYDEYEDGDLSSWINRERFQNYLTMDGFLLYELGDTGKLVAIAIIDEKNTSVEHTRLKSIIQEVARDYRDQFHRDFQFGHMDGNDYINTLLMDELKVPTVVVLNTSNQQYFLLDRQIKNVEDMVQFINNILDGTVYAQGGDSILQRLKRIVFDAKSTVVSIFRSSPLMGCFLFGLPLGVISIMCYGICTADADGGYIEERYEVSKSEPDDGPESEESQEPPQPRGGASPLPAPQGPKDVLEKKKD
SIO_010081: TMX3
subclass of: SO_0000673
so part of: TMX3
location: join(8575697..8575742,8576643..8576697,8579996..8580035,8581261..8581384,8588568..8588613,8589880..8589960,8591972..8592071,8592737..8592814,8595569..8595635,8597058..8597156,8599206..8599263,8599463..8599516,8602898..8602954,8607419..8607548,8608739..8608807,8610231..8610491)
location: region:8575697-8610491:1
so has part: feature:8575697-8575742:1:exon
so has part: feature:8576643-8576697:1:exon
so has part: feature:8579996-8580035:1:exon
so has part: feature:8581261-8581384:1:exon
so has part: feature:8588568-8588613:1:exon
so has part: feature:8589880-8589960:1:exon
so has part: feature:8591972-8592071:1:exon
so has part: feature:8592737-8592814:1:exon
so has part: feature:8595569-8595635:1:exon
so has part: feature:8597058-8597156:1:exon
so has part: feature:8599206-8599263:1:exon
so has part: feature:8599463-8599516:1:exon
so has part: feature:8602898-8602954:1:exon
so has part: feature:8607419-8607548:1:exon
so has part: feature:8608739-8608807:1:exon
so has part: feature:8610231-8610491:1:exon

XP_017895183.1
type: Protein
SIO_000068: ncbiprotein

position:8575697:1
position: 8575697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8610491:1
position: 8610491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8575697-8575742:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8576643-8576697:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8579996-8580035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8581261-8581384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8588568-8588613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8589880-8589960:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8591972-8592071:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8592737-8592814:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8595569-8595635:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8597058-8597156:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8599206-8599263:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8599463-8599516:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8602898-8602954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8607419-8607548:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8608739-8608807:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8610231-8610491:1:exon

DSEL
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: DSEL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9591761..9603206
location: region:9591761-9603206:1
so has part: feature:9591761-9603206:1:exon
subclass of: SO_0000010

102169063
type: Gene
SIO_000068: ncbigene

position:9591761:1
position: 9591761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9603206:1
position: 9603206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9591761-9603206:1:exon

DSEL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: DSEL
product: dermatan sulfate epimerase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 19 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_018039703.1
SIO_010081: DSEL
subclass of: SO_0000673
so part of: DSEL
location: join(9591761..9591961,9592815..9603206)
location: region:9591761-9603206:1
so has part: feature:9591761-9591961:1:exon
so has part: feature:9592815-9603206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9591761-9591961:1:exon

position:9591961:1
position: 9591961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9592815-9603206:1:exon

position:9592815:1
position: 9592815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DSEL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: DSEL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dermatan-sulfate epimerase-like protein
translation: MALMFTGHCLFLVLVMFAFSALEESVSNYSDWAVFTDDIDPFKIQRVQDVRPNQKLKKSMLHPRLYFDAGEIQAMRQKSRTTHLHLFRAIRSAVTAMLSNPTYYLPPPKHADFAAKWNEIYGNNLPPLALYCLLCPEDKVAFEFALEYMDRMVGYKDWLVENAPGDEVPVGHSLTGFATAFDFLYNLLDGRRRQKYLEKIWVITEEMYEYSKVRSWGKQLLHNHQATNMIALLTGALVTGVDKGTKVNLWKQVVVDVMEKTMFLLNHIVDGSLDEGVAYGSYTAKSVTQYVFLAQRHFNINNLDNNWLKMHFWFYYATLLPGFQRTVGIADSNYNWFYGPESQLVFLDKFVLKNGAGNWLAQQIRRHRPKDGPMVPSTAQRWSTLHTEYIWYDPQLTPQPPAEYGTAKMHLFPNWGVVTYGAGLPNTQTNTFVSFKSGKLGGRAVYDIVHFQPYSWIDGWRSFNPGHEHPDQNSFTFAPNGQVFVSEALYGPKLSHLNNVLVFAPSPTSQCNKPWEGQLGECAQWLKWTGEEVGDAAGEIITASQHGDMIFVSGEAVSAYSSAMKLKSVYRALLLLNSQTLLVVDHVEKQEDSPIKSVSAFFHNLDIDFKYIPYRFTNKYNGALMDVWDAHYKMFWFDHRGSSPLASIQEAEQAAEFKKRWTQFVNVTFQMESAITRIAYVFYGPYVNVSSCRFIDNTNSGLQLSLNVNNTDHVVSIVTDYQNLKTRFDYLGFGGFATVADQAQVTRFGLGTEAIVKPIKRDRVIFPFGFKFNVAVGLILCIGLVILTFQWRFYLSFRKLMWWILILVIALWSVELLDVWSACTQPICAKWARPETEASGQALAPGGQRTDLPDVVITSLPGSGAEILKQLFFNSSDFLYIRVPTAYIDIPETELEIDSFVDACEWRASDVHSVRFRLLRGWLQSLVRDTKLHLQNIHLHEPGRGKLAQYFTMNKDKKRKLKRRESLAEQRSRMKGAFDRDAEYVRALRRHLVHYPSARPVLSLGSGSWTLKLHFFHEVLGASMKALYVVRDPRAWVYSMLYSSKPSLYSLKNVQEHLAKLFKTEGGAGHCTLNSGYAVEYELLRKELLASRPHPVSLLAHAWLANTAAALRINADLLPTSYQLIKFEDLVLFPQNTTERIFAFLGIPLSPATLNQILFATSTNLFYLPYEGEISPANTNVWKRNLPKDEVKLIENICWTLMDRLGYPKFMD
SIO_010081: DSEL
subclass of: SO_0000673
so part of: DSEL
location: 9593710..9597348
location: region:9593710-9597348:1
so has part: feature:9593710-9597348:1:exon

XP_017895192.1
type: Protein
SIO_000068: ncbiprotein

position:9593710:1
position: 9593710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9597348:1
position: 9597348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9593710-9597348:1:exon

CDH19
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10307341..10383354
location: region:10307341-10383354:1
so has part: feature:10307341-10383354:1:exon
subclass of: SO_0000010

102169348
type: Gene
SIO_000068: ncbigene

position:10307341:1
position: 10307341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10383354:1
position: 10383354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10307341-10383354:1:exon

CDH19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CDH19
product: cadherin 19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018039815.1
SIO_010081: CDH19
subclass of: SO_0000673
so part of: CDH19
location: join(10307341..10307530,10335146..10335446,10338961..10339255,10345588..10345707,10348436..10348600,10350695..10350876,10351615..10351868,10356761..10356882,10368545..10368666,10373892..10374006,10377950..10378201,10381249..10383354)
location: region:10307341-10383354:1
so has part: feature:10307341-10307530:1:exon
so has part: feature:10335146-10335446:1:exon
so has part: feature:10338961-10339255:1:exon
so has part: feature:10345588-10345707:1:exon
so has part: feature:10348436-10348600:1:exon
so has part: feature:10350695-10350876:1:exon
so has part: feature:10351615-10351868:1:exon
so has part: feature:10356761-10356882:1:exon
so has part: feature:10368545-10368666:1:exon
so has part: feature:10373892-10374006:1:exon
so has part: feature:10377950-10378201:1:exon
so has part: feature:10381249-10383354:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10307341-10307530:1:exon

position:10307530:1
position: 10307530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10335146-10335446:1:exon

position:10335146:1
position: 10335146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10335446:1
position: 10335446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10338961-10339255:1:exon

position:10338961:1
position: 10338961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10339255:1
position: 10339255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10345588-10345707:1:exon

position:10345588:1
position: 10345588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10345707:1
position: 10345707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10348436-10348600:1:exon

position:10348436:1
position: 10348436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10348600:1
position: 10348600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10350695-10350876:1:exon

position:10350695:1
position: 10350695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10350876:1
position: 10350876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10351615-10351868:1:exon

position:10351615:1
position: 10351615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10351868:1
position: 10351868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10356761-10356882:1:exon

position:10356761:1
position: 10356761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10356882:1
position: 10356882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10368545-10368666:1:exon

position:10368545:1
position: 10368545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10368666:1
position: 10368666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10373892-10374006:1:exon

position:10373892:1
position: 10373892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10374006:1
position: 10374006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10377950-10378201:1:exon

position:10377950:1
position: 10377950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10378201:1
position: 10378201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10381249-10383354:1:exon

position:10381249:1
position: 10381249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDH19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-19
translation: MNCWLLLPFMFGIPLLWPCIIAAENSKTEEVRHPAGSHLRIRRGWMWNQFFVPEEMNKTRHHIGQLRSDLDNGNNSFQYKLLGVGAGNIFAIDERTGDIYAVEKLDREERSLYTLRAQVIDTSTGRAVEPESEFVIRVSDINDNEPKFLDEPYEAIVPEMSPEGTLVTQVTASDADDPSSGNNARLVYSLLQGQPYFSIEPTTGKIRISSKMDRELQDEYWVIIQAKDMIGLPGALSGTTSVLIRLSDVNDNKPIFKDSLYRLTVSESAPVGTSIGKIMAYDRDIGENAEMDYSIEDDSRTFDVITNNETQEGIIILKKKVNFEDQNHYRIRAKVKNPQVDEQLREYHTEASTTVIKIQVEDVDEPPVFLLPYYIFEIFEECPHGSSVGTVSATDPDQRKSPIGYSITRSEVFSVDDNGTIFTTNPLDRETSAWYNLSVVATEKYNIAQISSVPVYVQVLNINDHAPEFSEYYETYVCENAVAGQVIQTISAVDRDESIEHHHFYFNLSVEENNSSFAIIDNQDNTAVVVTNRTGFSLQEEPVFYISILIADNGIPPLTSTNTLTIHVCDCGDADSTQTCNHKDFMLSMGFRAEVITAVLICIMIIFGFIFLNLGLKQRRKQTLFPEKSEEFRENIFRYDDEGGGEADTEAFDIAQLRGSAVMRGRKPRRHARAEMRSLYRQSLQVGPDSAVFRKFILEKLEEADTDPCAPPFDSLQTYAFEGTGSLAGSLSSLDSAASDHDENYDYLNELGPRFKRLACMFGSTMQSKN
SIO_010081: CDH19
subclass of: SO_0000673
so part of: CDH19
location: join(10335252..10335446,10338961..10339255,10345588..10345707,10348436..10348600,10350695..10350876,10351615..10351868,10356761..10356882,10368545..10368666,10373892..10374006,10377950..10378201,10381249..10381739)
location: region:10335252-10381739:1
so has part: feature:10335252-10335446:1:exon
so has part: feature:10338961-10339255:1:exon
so has part: feature:10345588-10345707:1:exon
so has part: feature:10348436-10348600:1:exon
so has part: feature:10350695-10350876:1:exon
so has part: feature:10351615-10351868:1:exon
so has part: feature:10356761-10356882:1:exon
so has part: feature:10368545-10368666:1:exon
so has part: feature:10373892-10374006:1:exon
so has part: feature:10377950-10378201:1:exon
so has part: feature:10381249-10381739:1:exon

XP_017895304.1
type: Protein
SIO_000068: ncbiprotein

position:10335252:1
position: 10335252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10381739:1
position: 10381739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10335252-10335446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10338961-10339255:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10345588-10345707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10348436-10348600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10350695-10350876:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10351615-10351868:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10356761-10356882:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10368545-10368666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10373892-10374006:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10377950-10378201:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10381249-10381739:1:exon

CDH7
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CDH7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10925580..11065511)
location: region:10925580-11065511:-1
so has part: feature:10925580-11065511:-1:exon
subclass of: SO_0000010

102169638
type: Gene
SIO_000068: ncbigene

position:10925580:-1
position: 10925580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11065511:-1
position: 11065511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10925580-11065511:-1:exon

CDH7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CDH7
product: cadherin 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 35 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018039794.1
SIO_010081: CDH7
subclass of: SO_0000673
so part of: CDH7
location: complement(join(10925580..10928266,10942180..10942431,10945492..10945609,10946474..10946595,10948787..10948923,10961624..10961877,10984009..10984196,10986805..10986972,10994910..10995029,10999745..11000039,11051480..11051711,11065385..11065511))
location: region:10925580-11065511:-1
so has part: feature:11065385-11065511:-1:exon
so has part: feature:11051480-11051711:-1:exon
so has part: feature:10999745-11000039:-1:exon
so has part: feature:10994910-10995029:-1:exon
so has part: feature:10986805-10986972:-1:exon
so has part: feature:10984009-10984196:-1:exon
so has part: feature:10961624-10961877:-1:exon
so has part: feature:10948787-10948923:-1:exon
so has part: feature:10946474-10946595:-1:exon
so has part: feature:10945492-10945609:-1:exon
so has part: feature:10942180-10942431:-1:exon
so has part: feature:10925580-10928266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11065385-11065511:-1:exon

position:11065385:-1
position: 11065385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11051480-11051711:-1:exon

position:11051480:-1
position: 11051480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11051711:-1
position: 11051711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10999745-11000039:-1:exon

position:10999745:-1
position: 10999745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11000039:-1
position: 11000039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10994910-10995029:-1:exon

position:10994910:-1
position: 10994910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10995029:-1
position: 10995029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10986805-10986972:-1:exon

position:10986805:-1
position: 10986805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10986972:-1
position: 10986972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10984009-10984196:-1:exon

position:10984009:-1
position: 10984009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10984196:-1
position: 10984196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10961624-10961877:-1:exon

position:10961624:-1
position: 10961624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10961877:-1
position: 10961877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10948787-10948923:-1:exon

position:10948787:-1
position: 10948787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10948923:-1
position: 10948923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10946474-10946595:-1:exon

position:10946474:-1
position: 10946474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10946595:-1
position: 10946595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10945492-10945609:-1:exon

position:10945492:-1
position: 10945492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10945609:-1
position: 10945609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10942180-10942431:-1:exon

position:10942180:-1
position: 10942180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10942431:-1
position: 10942431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10925580-10928266:-1:exon

position:10928266:-1
position: 10928266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CDH7
product: cadherin 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 35 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018039793.1
SIO_010081: CDH7
subclass of: SO_0000673
so part of: CDH7
location: complement(join(10925580..10928266,10942180..10942431,10945492..10945609,10946474..10946595,10948787..10948923,10961624..10961877,10984009..10984196,10986805..10986972,10994910..10995029,10999745..11000039,11051480..11051885,11065385..11065504))
location: region:10925580-11065504:-1
so has part: feature:11065385-11065504:-1:exon
so has part: feature:11051480-11051885:-1:exon
so has part: feature:10999745-11000039:-1:exon
so has part: feature:10994910-10995029:-1:exon
so has part: feature:10986805-10986972:-1:exon
so has part: feature:10984009-10984196:-1:exon
so has part: feature:10961624-10961877:-1:exon
so has part: feature:10948787-10948923:-1:exon
so has part: feature:10946474-10946595:-1:exon
so has part: feature:10945492-10945609:-1:exon
so has part: feature:10942180-10942431:-1:exon
so has part: feature:10925580-10928266:-1:exon

position:11065504:-1
position: 11065504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11065385-11065504:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11051480-11051885:-1:exon

position:11051885:-1
position: 11051885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10999745-11000039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10994910-10995029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10986805-10986972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10984009-10984196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10961624-10961877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10948787-10948923:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10946474-10946595:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10945492-10945609:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10942180-10942431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10925580-10928266:-1:exon

CDH7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CDH7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-7
translation: MKLGKVEFCHFLQLIALFLCFSGMSQAELSRSGSKPYFQSGRSRTKRSWVWNQFFVLEEYMGSDPLYVGKLHSDVDKGDGSIKYILSGEGASSIFIIDENTGDIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPRFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFSVEPKTGVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQYNVPESLPVASVVARIKAADADIGANAEMDYKIVDGDGLGIFKIAVDKDTQEGIITIQKDLDFEAKTSYTLRIEAANKDADPRFLSLGPFSDTTTVKIIVEDVDEPPVFSAPLYPMEVSEATQVGNIIGTVAAHDPDSSNSPVRYSIDRNTDLERYFNIDANSGVITTAKSLDRETNAVHNITVLAMESQNPSQVGRGYVAITILDINDNAPEFAMDYETTVCENAQPGQVIQKVSAIDKDEPANGHQFYFSLTTDATNNHNFSLKDNKDNTASILTRRNGFRRQEQSVYYLPIFIVDSGSPSLSSTNTLTIRVCDCDADGVAQTCNAEAYVLPAGLSTGALIAILACVLTLLVLILLIVTMRRRKKEPLIFDEERDIRENIVRYDDEGGGEEDTEAFDMAALRNLNVMRDTKTRRDVTPEIQFLSRPTFKSIPDNVIFREFIWERLKEADVDPCAPPYDSLQTYAFEGNGSVAESLSSLDSISSNSDQNYDYLSDWGPRFKRLADMYGTGQESLYS
SIO_010081: CDH7
subclass of: SO_0000673
so part of: CDH7
location: complement(join(10927773..10928266,10942180..10942431,10945492..10945609,10946474..10946595,10948787..10948923,10961624..10961877,10984009..10984196,10986805..10986972,10994910..10995029,10999745..11000039,11051480..11051689))
location: region:10927773-11051689:-1
so has part: feature:11051480-11051689:-1:exon
so has part: feature:10999745-11000039:-1:exon
so has part: feature:10994910-10995029:-1:exon
so has part: feature:10986805-10986972:-1:exon
so has part: feature:10984009-10984196:-1:exon
so has part: feature:10961624-10961877:-1:exon
so has part: feature:10948787-10948923:-1:exon
so has part: feature:10946474-10946595:-1:exon
so has part: feature:10945492-10945609:-1:exon
so has part: feature:10942180-10942431:-1:exon
so has part: feature:10927773-10928266:-1:exon

XP_017895282.1
type: Protein
SIO_000068: ncbiprotein

position:10927773:-1
position: 10927773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11051689:-1
position: 11051689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11051480-11051689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10999745-11000039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10994910-10995029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10986805-10986972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10984009-10984196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10961624-10961877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10948787-10948923:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10946474-10946595:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10945492-10945609:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10942180-10942431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10927773-10928266:-1:exon

CDH7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CDH7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-7
translation: MKLGKVEFCHFLQLIALFLCFSGMSQAELSRSGSKPYFQSGRSRTKRSWVWNQFFVLEEYMGSDPLYVGKLHSDVDKGDGSIKYILSGEGASSIFIIDENTGDIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPRFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFSVEPKTGVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQYNVPESLPVASVVARIKAADADIGANAEMDYKIVDGDGLGIFKIAVDKDTQEGIITIQKDLDFEAKTSYTLRIEAANKDADPRFLSLGPFSDTTTVKIIVEDVDEPPVFSAPLYPMEVSEATQVGNIIGTVAAHDPDSSNSPVRYSIDRNTDLERYFNIDANSGVITTAKSLDRETNAVHNITVLAMESQNPSQVGRGYVAITILDINDNAPEFAMDYETTVCENAQPGQVIQKVSAIDKDEPANGHQFYFSLTTDATNNHNFSLKDNKDNTASILTRRNGFRRQEQSVYYLPIFIVDSGSPSLSSTNTLTIRVCDCDADGVAQTCNAEAYVLPAGLSTGALIAILACVLTLLVLILLIVTMRRRKKEPLIFDEERDIRENIVRYDDEGGGEEDTEAFDMAALRNLNVMRDTKTRRDVTPEIQFLSRPTFKSIPDNVIFREFIWERLKEADVDPCAPPYDSLQTYAFEGNGSVAESLSSLDSISSNSDQNYDYLSDWGPRFKRLADMYGTGQESLYS
SIO_010081: CDH7
subclass of: SO_0000673
so part of: CDH7
location: complement(join(10927773..10928266,10942180..10942431,10945492..10945609,10946474..10946595,10948787..10948923,10961624..10961877,10984009..10984196,10986805..10986972,10994910..10995029,10999745..11000039,11051480..11051689))
location: region:10927773-11051689:-1
so has part: feature:11051480-11051689:-1:exon
so has part: feature:10999745-11000039:-1:exon
so has part: feature:10994910-10995029:-1:exon
so has part: feature:10986805-10986972:-1:exon
so has part: feature:10984009-10984196:-1:exon
so has part: feature:10961624-10961877:-1:exon
so has part: feature:10948787-10948923:-1:exon
so has part: feature:10946474-10946595:-1:exon
so has part: feature:10945492-10945609:-1:exon
so has part: feature:10942180-10942431:-1:exon
so has part: feature:10927773-10928266:-1:exon

XP_017895283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11051480-11051689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10999745-11000039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10994910-10995029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10986805-10986972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10984009-10984196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10961624-10961877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10948787-10948923:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10946474-10946595:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10945492-10945609:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10942180-10942431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10927773-10928266:-1:exon

LOC102169925
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102169925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12553127..12573274)
location: region:12553127-12573274:-1
so has part: feature:12553127-12573274:-1:exon
subclass of: SO_0000010

102169925
type: Gene
SIO_000068: ncbigene

position:12553127:-1
position: 12553127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12573274:-1
position: 12573274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12553127-12573274:-1:exon

LOC102169925
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102169925
product: serpin B8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 19 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_018039758.1
SIO_010081: LOC102169925
subclass of: SO_0000673
so part of: LOC102169925
location: complement(join(12553127..12553653,12557074..12557226,12558804..12558946,12559537..12559654,12561869..12562006,12564320..12564497,12572912..12573274))
location: region:12553127-12573274:-1
so has part: feature:12572912-12573274:-1:exon
so has part: feature:12564320-12564497:-1:exon
so has part: feature:12561869-12562006:-1:exon
so has part: feature:12559537-12559654:-1:exon
so has part: feature:12558804-12558946:-1:exon
so has part: feature:12557074-12557226:-1:exon
so has part: feature:12553127-12553653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12572912-12573274:-1:exon

position:12572912:-1
position: 12572912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12564320-12564497:-1:exon

position:12564320:-1
position: 12564320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12564497:-1
position: 12564497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12561869-12562006:-1:exon

position:12561869:-1
position: 12561869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12562006:-1
position: 12562006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12559537-12559654:-1:exon

position:12559537:-1
position: 12559537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12559654:-1
position: 12559654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12558804-12558946:-1:exon

position:12558804:-1
position: 12558804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12558946:-1
position: 12558946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12557074-12557226:-1:exon

position:12557074:-1
position: 12557074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12557226:-1
position: 12557226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12553127-12553653:-1:exon

position:12553653:-1
position: 12553653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102169925
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102169925
product: serpin B8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_018039759.1
SIO_010081: LOC102169925
subclass of: SO_0000673
so part of: LOC102169925
location: complement(join(12553127..12553653,12557074..12557226,12558804..12558946,12559537..12559654,12560311..12560396,12561869..12562006,12564320..12564497,12572912..12573070))
location: region:12553127-12573070:-1
so has part: feature:12572912-12573070:-1:exon
so has part: feature:12564320-12564497:-1:exon
so has part: feature:12561869-12562006:-1:exon
so has part: feature:12560311-12560396:-1:exon
so has part: feature:12559537-12559654:-1:exon
so has part: feature:12558804-12558946:-1:exon
so has part: feature:12557074-12557226:-1:exon
so has part: feature:12553127-12553653:-1:exon

position:12573070:-1
position: 12573070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12572912-12573070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12564320-12564497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12561869-12562006:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12560311-12560396:-1:exon

position:12560311:-1
position: 12560311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12560396:-1
position: 12560396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12559537-12559654:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12558804-12558946:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12557074-12557226:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12553127-12553653:-1:exon

LOC102169925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102169925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serpin B8 isoform X1
translation: MDALCKANGTFAINLLKMLGEEDHSRNVFFSPLSLSSVLTMVLMGAKGNTAAQMSQALCLNEGGDVHRGFQSLLREVSTSGPQCLLRTANRLFGEKTCAFLPAFKESCQRFYQADLEELSFAEDTEECRKHINDWVMEKTEGKISEILGAGTVGPLTKLVLVNAIYFKGKWNEQFNRKHTRGMPFKTNQEKKTVQMMFKQAKFKMGHVEEVPAQVLELPYVGAELSMLILLPDENTDLAVVEKALTYEKFRTWTSPEKLTEEKVQVFLPRLKLEASYDLEAFLRRLGMTDAFEEAKADFSGMSAKKNVPMSKVAHKCFVEVNEEGTEAAGATAVVRNSRCCRMEPKFCADHPFLFFIRHRETNSILFCGRFSSP
SIO_010081: LOC102169925
subclass of: SO_0000673
so part of: LOC102169925
location: complement(join(12553249..12553653,12557074..12557226,12558804..12558946,12559537..12559654,12561869..12562006,12564320..12564487))
location: region:12553249-12564487:-1
so has part: feature:12564320-12564487:-1:exon
so has part: feature:12561869-12562006:-1:exon
so has part: feature:12559537-12559654:-1:exon
so has part: feature:12558804-12558946:-1:exon
so has part: feature:12557074-12557226:-1:exon
so has part: feature:12553249-12553653:-1:exon

XP_017895247.1
type: Protein
SIO_000068: ncbiprotein

position:12553249:-1
position: 12553249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12564487:-1
position: 12564487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12564320-12564487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12561869-12562006:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12559537-12559654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12558804-12558946:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12557074-12557226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12553249-12553653:-1:exon

LOC102169925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102169925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serpin B8 isoform X2
translation: MCFPAKTRMFEDRRWAEDGSQLPGTLYQKTSFREAFKESCQRFYQADLEELSFAEDTEECRKHINDWVMEKTEGKISEILGAGTVGPLTKLVLVNAIYFKGKWNEQFNRKHTRGMPFKTNQEKKTVQMMFKQAKFKMGHVEEVPAQVLELPYVGAELSMLILLPDENTDLAVVEKALTYEKFRTWTSPEKLTEEKVQVFLPRLKLEASYDLEAFLRRLGMTDAFEEAKADFSGMSAKKNVPMSKVAHKCFVEVNEEGTEAAGATAVVRNSRCCRMEPKFCADHPFLFFIRHRETNSILFCGRFSSP
SIO_010081: LOC102169925
subclass of: SO_0000673
so part of: LOC102169925
location: complement(join(12553249..12553653,12557074..12557226,12558804..12558946,12559537..12559654,12560311..12560396,12561869..12561884))
location: region:12553249-12561884:-1
so has part: feature:12561869-12561884:-1:exon
so has part: feature:12560311-12560396:-1:exon
so has part: feature:12559537-12559654:-1:exon
so has part: feature:12558804-12558946:-1:exon
so has part: feature:12557074-12557226:-1:exon
so has part: feature:12553249-12553653:-1:exon

XP_017895248.1
type: Protein
SIO_000068: ncbiprotein

position:12561884:-1
position: 12561884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12561869-12561884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12560311-12560396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12559537-12559654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12558804-12558946:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12557074-12557226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12553249-12553653:-1:exon

TRNAK-UUU
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAK-UUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(12569936..12570008)
location: region:12569936-12570008:-1
so has part: feature:12569936-12570008:-1:exon
subclass of: SO_0000663

108633824
type: Gene
SIO_000068: ncbigene

position:12569936:-1
position: 12569936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12570008:-1
position: 12570008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12569936-12570008:-1:exon

TRNAK-UUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAK-UUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon UUU); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(12569973..12569975),aa:Lys, seq:ttt)
SIO_010081: TRNAK-UUU
subclass of: SO_0000673
so part of: TRNAK-UUU
location: complement(12569936..12570008)
location: region:12569936-12570008:-1
so has part: feature:12569936-12570008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12569936-12570008:-1:exon

LOC108633763
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108633763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(12575888..12594795)
location: region:12575888-12594795:-1
so has part: feature:12575888-12594795:-1:exon

108633763
type: Gene
SIO_000068: ncbigene

position:12575888:-1
position: 12575888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12594795:-1
position: 12594795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12575888-12594795:-1:exon

LOC108633763
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633763
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC108633763
subclass of: SO_0000673
so part of: LOC108633763
location: complement(12575888..12576452)
location: region:12575888-12576452:-1
so has part: feature:12575888-12576452:-1:exon

position:12576452:-1
position: 12576452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12575888-12576452:-1:exon

LOC108633763
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633763
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC108633763
subclass of: SO_0000673
so part of: LOC108633763
location: complement(12580226..12580382)
location: region:12580226-12580382:-1
so has part: feature:12580226-12580382:-1:exon

position:12580226:-1
position: 12580226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12580382:-1
position: 12580382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12580226-12580382:-1:exon

LOC108633763
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633763
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC108633763
subclass of: SO_0000673
so part of: LOC108633763
location: complement(12588163..12588244)
location: region:12588163-12588244:-1
so has part: feature:12588163-12588244:-1:exon

position:12588163:-1
position: 12588163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12588244:-1
position: 12588244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12588163-12588244:-1:exon

LOC108633763
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633763
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC108633763
subclass of: SO_0000673
so part of: LOC108633763
location: complement(12594727..12594795)
location: region:12594727-12594795:-1
so has part: feature:12594727-12594795:-1:exon

position:12594727:-1
position: 12594727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12594727-12594795:-1:exon

LOC102170373
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102170373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12598612..12615342)
location: region:12598612-12615342:-1
so has part: feature:12598612-12615342:-1:exon
subclass of: SO_0000010

102170373
type: Gene
SIO_000068: ncbigene

position:12598612:-1
position: 12598612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12615342:-1
position: 12615342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12598612-12615342:-1:exon

LOC102170373
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102170373
product: plasminogen activator inhibitor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005696965.3
SIO_010081: LOC102170373
subclass of: SO_0000673
so part of: LOC102170373
location: complement(join(12598612..12599279,12599902..12600066,12600758..12600900,12603998..12604115,12604756..12604884,12606587..12606706,12610802..12610981,12615234..12615342))
location: region:12598612-12615342:-1
so has part: feature:12615234-12615342:-1:exon
so has part: feature:12610802-12610981:-1:exon
so has part: feature:12606587-12606706:-1:exon
so has part: feature:12604756-12604884:-1:exon
so has part: feature:12603998-12604115:-1:exon
so has part: feature:12600758-12600900:-1:exon
so has part: feature:12599902-12600066:-1:exon
so has part: feature:12598612-12599279:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12615234-12615342:-1:exon

position:12615234:-1
position: 12615234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12610802-12610981:-1:exon

position:12610802:-1
position: 12610802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12610981:-1
position: 12610981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12606587-12606706:-1:exon

position:12606587:-1
position: 12606587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12606706:-1
position: 12606706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12604756-12604884:-1:exon

position:12604756:-1
position: 12604756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12604884:-1
position: 12604884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12603998-12604115:-1:exon

position:12603998:-1
position: 12603998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12604115:-1
position: 12604115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12600758-12600900:-1:exon

position:12600758:-1
position: 12600758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12600900:-1
position: 12600900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12599902-12600066:-1:exon

position:12599902:-1
position: 12599902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12600066:-1
position: 12600066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12598612-12599279:-1:exon

position:12599279:-1
position: 12599279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102170373
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102170373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasminogen activator inhibitor 2
translation: MEELNVANTIFALNFFKHLANTSANTQNIFFCPWSVSSTMAMVYLGARGNTADQIAQVLQFNQVGVHKGTPVTQQSLTSCDFTQQIQRDTYPDAILQAQAAGKIHSSFRSLSNAINASTGEYLLESANKLFGEKSARFKEEYMQLSKKYYSTEPQAVDFLECAEDTRKEINSWVKTQTKGKIPNLLPEGSVDVDTKMVLVNAVYFKGRWKTPFQKKLKGLYPFRVNSTQRKSVEMMFLNEKLNIGYIADLKVQILELPYAGDVSMFLLLPDGIAESSTGLELLESEITYDKLNKWLSEDTMAEDDVVVYIPEFKLEERYELKTILTSMGMGDAFSQGRANFSGMSGKNDLFLSEVFHQASVEVNEEGTEAAAGTGAIMTGRTGHGGPQFVADHPFLFLIMHKITKSILFLGRFASP
SIO_010081: LOC102170373
subclass of: SO_0000673
so part of: LOC102170373
location: complement(join(12598875..12599279,12599902..12600066,12600758..12600900,12603998..12604115,12604756..12604884,12606587..12606706,12610802..12610972))
location: region:12598875-12610972:-1
so has part: feature:12610802-12610972:-1:exon
so has part: feature:12606587-12606706:-1:exon
so has part: feature:12604756-12604884:-1:exon
so has part: feature:12603998-12604115:-1:exon
so has part: feature:12600758-12600900:-1:exon
so has part: feature:12599902-12600066:-1:exon
so has part: feature:12598875-12599279:-1:exon

XP_005697022.1
type: Protein
SIO_000068: ncbiprotein

position:12598875:-1
position: 12598875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12610972:-1
position: 12610972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12610802-12610972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12606587-12606706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12604756-12604884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12603998-12604115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12600758-12600900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12599902-12600066:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12598875-12599279:-1:exon

SYT4
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SYT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12775730..12785835
location: region:12775730-12785835:1
so has part: feature:12775730-12785835:1:exon
subclass of: SO_0000010

102170652
type: Gene
SIO_000068: ncbigene

position:12775730:1
position: 12775730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12785835:1
position: 12785835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12775730-12785835:1:exon

SYT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SYT4
product: synaptotagmin 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 90 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005696966.3
SIO_010081: SYT4
subclass of: SO_0000673
so part of: SYT4
location: join(12775730..12776015,12778816..12779630,12781650..12781770,12783162..12785835)
location: region:12775730-12785835:1
so has part: feature:12775730-12776015:1:exon
so has part: feature:12778816-12779630:1:exon
so has part: feature:12781650-12781770:1:exon
so has part: feature:12783162-12785835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12775730-12776015:1:exon

position:12776015:1
position: 12776015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12778816-12779630:1:exon

position:12778816:1
position: 12778816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12779630:1
position: 12779630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12781650-12781770:1:exon

position:12781650:1
position: 12781650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12781770:1
position: 12781770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12783162-12785835:1:exon

position:12783162:1
position: 12783162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SYT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-4
translation: MAPISASREEFDEIPTVVGIFSAFGLVFTVSLFAWICCQRKSSKPSKTPPYKFVHVLKGVDIYPESLNSKKKFGADEKNEVKNKSAVPKNSLHLDLEKRDLNGNFPKTNLKAGSPSDLDSVTPKLSSEGGKEVVSPDSLNSSTSLTSDEKQEKLGTLFFSLEYNFEKKAFVVNIKEARGLPAMDDQSMTSDPYIKMMILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTVLSFDRFSRDDVIGEVLIPLAGIELTNGEMLMNREITKRNVRKSSGRGELLISLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCEGLEEISVEFLVLDSERGSRSEVIGRLVLGAAAEGTGGEHWKEICDYPRRQIAKWHALCDG
SIO_010081: SYT4
subclass of: SO_0000673
so part of: SYT4
location: join(12775982..12776015,12778816..12779630,12781650..12781770,12783162..12783469)
location: region:12775982-12783469:1
so has part: feature:12775982-12776015:1:exon
so has part: feature:12778816-12779630:1:exon
so has part: feature:12781650-12781770:1:exon
so has part: feature:12783162-12783469:1:exon

XP_005697023.2
type: Protein
SIO_000068: ncbiprotein

position:12775982:1
position: 12775982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12783469:1
position: 12783469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12775982-12776015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12778816-12779630:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12781650-12781770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12783162-12783469:1:exon

LOC108633764
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108633764
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(12943923..12948445)
location: region:12943923-12948445:-1
so has part: feature:12943923-12948445:-1:exon

108633764
type: Gene
SIO_000068: ncbigene

position:12943923:-1
position: 12943923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12948445:-1
position: 12948445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12943923-12948445:-1:exon

LOC108633764
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633764
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC108633764
subclass of: SO_0000673
so part of: LOC108633764
location: complement(12943923..12944588)
location: region:12943923-12944588:-1
so has part: feature:12943923-12944588:-1:exon

position:12944588:-1
position: 12944588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12943923-12944588:-1:exon

LOC108633764
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633764
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC108633764
subclass of: SO_0000673
so part of: LOC108633764
location: complement(12944750..12948081)
location: region:12944750-12948081:-1
so has part: feature:12944750-12948081:-1:exon

position:12944750:-1
position: 12944750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12948081:-1
position: 12948081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12944750-12948081:-1:exon

LOC108633764
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108633764
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC108633764
subclass of: SO_0000673
so part of: LOC108633764
location: complement(12948163..12948445)
location: region:12948163-12948445:-1
so has part: feature:12948163-12948445:-1:exon

position:12948163:-1
position: 12948163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12948163-12948445:-1:exon

LOC102171118
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102171118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13921463..13926316
location: region:13921463-13926316:1
so has part: feature:13921463-13926316:1:exon
subclass of: SO_0000010

102171118
type: Gene
SIO_000068: ncbigene

position:13921463:1
position: 13921463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13926316:1
position: 13926316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13921463-13926316:1:exon

LOC102171118
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102171118
product: pyrin domain-containing protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_013974340.2
SIO_010081: LOC102171118
subclass of: SO_0000673
so part of: LOC102171118
location: join(13921463..13921550,13923154..13923583,13925239..13926316)
location: region:13921463-13926316:1
so has part: feature:13921463-13921550:1:exon
so has part: feature:13923154-13923583:1:exon
so has part: feature:13925239-13926316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13921463-13921550:1:exon

position:13921550:1
position: 13921550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13923154-13923583:1:exon

position:13923154:1
position: 13923154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13923583:1
position: 13923583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13925239-13926316:1:exon

position:13925239:1
position: 13925239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102171118
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102171118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyrin domain-containing protein 3
translation: MSQSPRHPVPPLLQPQKRKGTPLSLPPPPTWKVQQTLRQPAAEIPDEQMVEPPIKQMSGLYIKDHDPPIPLRRRKPPGRPARATQQASIPTWGQIKSLCHQAQGIASLQGSSASPERVFIAMLALLSCQNSATQHSEAPD
SIO_010081: LOC102171118
subclass of: SO_0000673
so part of: LOC102171118
location: join(13923197..13923583,13925239..13925274)
location: region:13923197-13925274:1
so has part: feature:13923197-13923583:1:exon
so has part: feature:13925239-13925274:1:exon

XP_013829794.2
type: Protein
SIO_000068: ncbiprotein

position:13923197:1
position: 13923197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13925274:1
position: 13925274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13923197-13923583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13925239-13925274:1:exon

LOC102171289
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102171289
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(14054422..14054855)
location: region:14054422-14054855:-1
so has part: feature:14054422-14054855:-1:exon

102171289
type: Gene
SIO_000068: ncbigene

position:14054422:-1
position: 14054422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14054855:-1
position: 14054855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14054422-14054855:-1:exon

LOC102171289
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102171289
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102171289
subclass of: SO_0000673
so part of: LOC102171289
location: complement(14054422..14054855)
location: region:14054422-14054855:-1
so has part: feature:14054422-14054855:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14054422-14054855:-1:exon

PIK3C3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: PIK3C3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(14057916..14217759)
location: region:14057916-14217759:-1
so has part: feature:14057916-14217759:-1:exon
subclass of: SO_0000010

102171561
type: Gene
SIO_000068: ncbigene

position:14057916:-1
position: 14057916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14217759:-1
position: 14217759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14057916-14217759:-1:exon

PIK3C3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PIK3C3
product: phosphatidylinositol 3-kinase catalytic subunit type 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 12 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_005696968.3
SIO_010081: PIK3C3
subclass of: SO_0000673
so part of: PIK3C3
location: complement(join(14057916..14058280,14063915..14064040,14068477..14068567,14075543..14075711,14089504..14089578,14101780..14101864,14104445..14104509,14109885..14109954,14110506..14110634,14113083..14113214,14116033..14116149,14119386..14119491,14125796..14125863,14129061..14129151,14130750..14130904,14138495..14138680,14148056..14148148,14149286..14149390,14152698..14152769,14155387..14155482,14157577..14157663,14191776..14191905,14207548..14207691,14213234..14213422,14217599..14217759))
location: region:14057916-14217759:-1
so has part: feature:14217599-14217759:-1:exon
so has part: feature:14213234-14213422:-1:exon
so has part: feature:14207548-14207691:-1:exon
so has part: feature:14191776-14191905:-1:exon
so has part: feature:14157577-14157663:-1:exon
so has part: feature:14155387-14155482:-1:exon
so has part: feature:14152698-14152769:-1:exon
so has part: feature:14149286-14149390:-1:exon
so has part: feature:14148056-14148148:-1:exon
so has part: feature:14138495-14138680:-1:exon
so has part: feature:14130750-14130904:-1:exon
so has part: feature:14129061-14129151:-1:exon
so has part: feature:14125796-14125863:-1:exon
so has part: feature:14119386-14119491:-1:exon
so has part: feature:14116033-14116149:-1:exon
so has part: feature:14113083-14113214:-1:exon
so has part: feature:14110506-14110634:-1:exon
so has part: feature:14109885-14109954:-1:exon
so has part: feature:14104445-14104509:-1:exon
so has part: feature:14101780-14101864:-1:exon
so has part: feature:14089504-14089578:-1:exon
so has part: feature:14075543-14075711:-1:exon
so has part: feature:14068477-14068567:-1:exon
so has part: feature:14063915-14064040:-1:exon
so has part: feature:14057916-14058280:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14217599-14217759:-1:exon

position:14217599:-1
position: 14217599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14213234-14213422:-1:exon

position:14213234:-1
position: 14213234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14213422:-1
position: 14213422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14207548-14207691:-1:exon

position:14207548:-1
position: 14207548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14207691:-1
position: 14207691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14191776-14191905:-1:exon

position:14191776:-1
position: 14191776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14191905:-1
position: 14191905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14157577-14157663:-1:exon

position:14157577:-1
position: 14157577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14157663:-1
position: 14157663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14155387-14155482:-1:exon

position:14155387:-1
position: 14155387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14155482:-1
position: 14155482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14152698-14152769:-1:exon

position:14152698:-1
position: 14152698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14152769:-1
position: 14152769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14149286-14149390:-1:exon

position:14149286:-1
position: 14149286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14149390:-1
position: 14149390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14148056-14148148:-1:exon

position:14148056:-1
position: 14148056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14148148:-1
position: 14148148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:14138495-14138680:-1:exon

position:14138495:-1
position: 14138495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14138680:-1
position: 14138680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:14130750-14130904:-1:exon

position:14130750:-1
position: 14130750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14130904:-1
position: 14130904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:14129061-14129151:-1:exon

position:14129061:-1
position: 14129061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14129151:-1
position: 14129151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:14125796-14125863:-1:exon

position:14125796:-1
position: 14125796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14125863:-1
position: 14125863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:14119386-14119491:-1:exon

position:14119386:-1
position: 14119386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14119491:-1
position: 14119491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:14116033-14116149:-1:exon

position:14116033:-1
position: 14116033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14116149:-1
position: 14116149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:14113083-14113214:-1:exon

position:14113083:-1
position: 14113083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14113214:-1
position: 14113214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:14110506-14110634:-1:exon

position:14110506:-1
position: 14110506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14110634:-1
position: 14110634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:14109885-14109954:-1:exon

position:14109885:-1
position: 14109885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14109954:-1
position: 14109954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:14104445-14104509:-1:exon

position:14104445:-1
position: 14104445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14104509:-1
position: 14104509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:14101780-14101864:-1:exon

position:14101780:-1
position: 14101780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14101864:-1
position: 14101864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:14089504-14089578:-1:exon

position:14089504:-1
position: 14089504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14089578:-1
position: 14089578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:14075543-14075711:-1:exon

position:14075543:-1
position: 14075543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14075711:-1
position: 14075711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:14068477-14068567:-1:exon

position:14068477:-1
position: 14068477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14068567:-1
position: 14068567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:14063915-14064040:-1:exon

position:14063915:-1
position: 14063915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14064040:-1
position: 14064040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:14057916-14058280:-1:exon

position:14058280:-1
position: 14058280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIK3C3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PIK3C3
product: phosphatidylinositol 3-kinase catalytic subunit type 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005696969.3
SIO_010081: PIK3C3
subclass of: SO_0000673
so part of: PIK3C3
location: complement(join(14057921..14058280,14063915..14064040,14068477..14068567,14075543..14075711,14089504..14089578,14101780..14101864,14104445..14104509,14109885..14109954,14110506..14110634,14113083..14113214,14116033..14116149,14119386..14119491,14125796..14125863,14129061..14129151,14130750..14130904,14138495..14138680,14148056..14148148,14149286..14149390,14152698..14152769,14155387..14155482,14157577..14157663,14191776..14191905,14207548..14207691,14217599..14217759))
location: region:14057921-14217759:-1
so has part: feature:14217599-14217759:-1:exon
so has part: feature:14207548-14207691:-1:exon
so has part: feature:14191776-14191905:-1:exon
so has part: feature:14157577-14157663:-1:exon
so has part: feature:14155387-14155482:-1:exon
so has part: feature:14152698-14152769:-1:exon
so has part: feature:14149286-14149390:-1:exon
so has part: feature:14148056-14148148:-1:exon
so has part: feature:14138495-14138680:-1:exon
so has part: feature:14130750-14130904:-1:exon
so has part: feature:14129061-14129151:-1:exon
so has part: feature:14125796-14125863:-1:exon
so has part: feature:14119386-14119491:-1:exon
so has part: feature:14116033-14116149:-1:exon
so has part: feature:14113083-14113214:-1:exon
so has part: feature:14110506-14110634:-1:exon
so has part: feature:14109885-14109954:-1:exon
so has part: feature:14104445-14104509:-1:exon
so has part: feature:14101780-14101864:-1:exon
so has part: feature:14089504-14089578:-1:exon
so has part: feature:14075543-14075711:-1:exon
so has part: feature:14068477-14068567:-1:exon
so has part: feature:14063915-14064040:-1:exon
so has part: feature:14057921-14058280:-1:exon

position:14057921:-1
position: 14057921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14217599-14217759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14207548-14207691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14191776-14191905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14157577-14157663:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14155387-14155482:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14152698-14152769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14149286-14149390:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14148056-14148148:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14138495-14138680:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14130750-14130904:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14129061-14129151:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14125796-14125863:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14119386-14119491:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14116033-14116149:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14113083-14113214:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14110506-14110634:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14109885-14109954:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14104445-14104509:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14101780-14101864:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14089504-14089578:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14075543-14075711:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14068477-14068567:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14063915-14064040:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14057921-14058280:-1:exon

PIK3C3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PIK3C3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3-kinase catalytic subunit type 3 isoform X3
translation: MGEAEKFHYVYSCDLDINVQLKIWNEWLKLPVKYPDLPRNAQVALTIWDVYGPGKAVPVGGTTVSLFGKYGMFRQGMHDLKVWPNVEADGSEPTKTPGRTSSTLSEDQMSRLAKLTKAHRQGHMVKVDWLDRLTFREIEMINESEKRSSNFMYLMVEFRCVKCDDKEYGIVYYEKDGDESSPILTSFEIVKVPDPQMSMENLVESKHHKLARSLRSGPSDHDLKPNAATRDQLNIIVSYPPTKQLTYEEQDLVWKFRYYLTNQEKALTKFLKCVNWDLPQEAKQALELLGKWKPMDVEDSLELLSSHYTNPTVRRYAVARLRQADDEDLLMYLLQLVQALKYENFDDIKNGLEPTKKDSQGSVSESVSNSGINSAEIDSSQIITSPLPPVSSPPSASKTKESSDGENLEQDLCTFLISRACKNSTLANYLYWYVIVECEDQDTQQRDPKTHEMYLNVMRRFSQALLKGDKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLTKTGKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALFAAVVEQIHKFAQYWRK
SIO_010081: PIK3C3
subclass of: SO_0000673
so part of: PIK3C3
location: complement(join(14058266..14058280,14063915..14064040,14068477..14068567,14075543..14075711,14089504..14089578,14101780..14101864,14104445..14104509,14109885..14109954,14110506..14110634,14113083..14113214,14116033..14116149,14119386..14119491,14125796..14125863,14129061..14129151,14130750..14130904,14138495..14138680,14148056..14148148,14149286..14149390,14152698..14152769,14155387..14155482,14157577..14157663,14191776..14191905,14207548..14207691,14217599..14217666))
location: region:14058266-14217666:-1
so has part: feature:14217599-14217666:-1:exon
so has part: feature:14207548-14207691:-1:exon
so has part: feature:14191776-14191905:-1:exon
so has part: feature:14157577-14157663:-1:exon
so has part: feature:14155387-14155482:-1:exon
so has part: feature:14152698-14152769:-1:exon
so has part: feature:14149286-14149390:-1:exon
so has part: feature:14148056-14148148:-1:exon
so has part: feature:14138495-14138680:-1:exon
so has part: feature:14130750-14130904:-1:exon
so has part: feature:14129061-14129151:-1:exon
so has part: feature:14125796-14125863:-1:exon
so has part: feature:14119386-14119491:-1:exon
so has part: feature:14116033-14116149:-1:exon
so has part: feature:14113083-14113214:-1:exon
so has part: feature:14110506-14110634:-1:exon
so has part: feature:14109885-14109954:-1:exon
so has part: feature:14104445-14104509:-1:exon
so has part: feature:14101780-14101864:-1:exon
so has part: feature:14089504-14089578:-1:exon
so has part: feature:14075543-14075711:-1:exon
so has part: feature:14068477-14068567:-1:exon
so has part: feature:14063915-14064040:-1:exon
so has part: feature:14058266-14058280:-1:exon

XP_005697026.1
type: Protein
SIO_000068: ncbiprotein

position:14058266:-1
position: 14058266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14217666:-1
position: 14217666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14217599-14217666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14207548-14207691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14191776-14191905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14157577-14157663:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14155387-14155482:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14152698-14152769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14149286-14149390:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14148056-14148148:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14138495-14138680:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14130750-14130904:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14129061-14129151:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14125796-14125863:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14119386-14119491:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14116033-14116149:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14113083-14113214:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14110506-14110634:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14109885-14109954:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14104445-14104509:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14101780-14101864:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14089504-14089578:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14075543-14075711:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14068477-14068567:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14063915-14064040:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14058266-14058280:-1:exon

PIK3C3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PIK3C3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3-kinase catalytic subunit type 3 isoform X1
translation: MGEAEKFHYVYSCDLDINVQLKIGSLEGKREQKSYKAVLEDPMLKFSGLYQETCSDLYVTCQVFAEGKPLALPVRTSYKAFSTRWNWNEWLKLPVKYPDLPRNAQVALTIWDVYGPGKAVPVGGTTVSLFGKYGMFRQGMHDLKVWPNVEADGSEPTKTPGRTSSTLSEDQMSRLAKLTKAHRQGHMVKVDWLDRLTFREIEMINESEKRSSNFMYLMVEFRCVKCDDKEYGIVYYEKDGDESSPILTSFEIVKVPDPQMSMENLVESKHHKLARSLRSGPSDHDLKPNAATRDQLNIIVSYPPTKQLTYEEQDLVWKFRYYLTNQEKALTKFLKCVNWDLPQEAKQALELLGKWKPMDVEDSLELLSSHYTNPTVRRYAVARLRQADDEDLLMYLLQLVQALKYENFDDIKNGLEPTKKDSQGSVSESVSNSGINSAEIDSSQIITSPLPPVSSPPSASKTKESSDGENLEQDLCTFLISRACKNSTLANYLYWYVIVECEDQDTQQRDPKTHEMYLNVMRRFSQALLKGDKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLTKTGKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALFAAVVEQIHKFAQYWRK
SIO_010081: PIK3C3
subclass of: SO_0000673
so part of: PIK3C3
location: complement(join(14058266..14058280,14063915..14064040,14068477..14068567,14075543..14075711,14089504..14089578,14101780..14101864,14104445..14104509,14109885..14109954,14110506..14110634,14113083..14113214,14116033..14116149,14119386..14119491,14125796..14125863,14129061..14129151,14130750..14130904,14138495..14138680,14148056..14148148,14149286..14149390,14152698..14152769,14155387..14155482,14157577..14157663,14191776..14191905,14207548..14207691,14213234..14213422,14217599..14217666))
location: region:14058266-14217666:-1
so has part: feature:14217599-14217666:-1:exon
so has part: feature:14213234-14213422:-1:exon
so has part: feature:14207548-14207691:-1:exon
so has part: feature:14191776-14191905:-1:exon
so has part: feature:14157577-14157663:-1:exon
so has part: feature:14155387-14155482:-1:exon
so has part: feature:14152698-14152769:-1:exon
so has part: feature:14149286-14149390:-1:exon
so has part: feature:14148056-14148148:-1:exon
so has part: feature:14138495-14138680:-1:exon
so has part: feature:14130750-14130904:-1:exon
so has part: feature:14129061-14129151:-1:exon
so has part: feature:14125796-14125863:-1:exon
so has part: feature:14119386-14119491:-1:exon
so has part: feature:14116033-14116149:-1:exon
so has part: feature:14113083-14113214:-1:exon
so has part: feature:14110506-14110634:-1:exon
so has part: feature:14109885-14109954:-1:exon
so has part: feature:14104445-14104509:-1:exon
so has part: feature:14101780-14101864:-1:exon
so has part: feature:14089504-14089578:-1:exon
so has part: feature:14075543-14075711:-1:exon
so has part: feature:14068477-14068567:-1:exon
so has part: feature:14063915-14064040:-1:exon
so has part: feature:14058266-14058280:-1:exon

XP_005697025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14217599-14217666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14213234-14213422:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14207548-14207691:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14191776-14191905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14157577-14157663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14155387-14155482:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14152698-14152769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14149286-14149390:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14148056-14148148:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14138495-14138680:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14130750-14130904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14129061-14129151:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14125796-14125863:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14119386-14119491:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14116033-14116149:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14113083-14113214:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14110506-14110634:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14109885-14109954:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14104445-14104509:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14101780-14101864:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14089504-14089578:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14075543-14075711:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14068477-14068567:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14063915-14064040:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:14058266-14058280:-1:exon

PIK3C3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9925
gene: PIK3C3
product: phosphatidylinositol 3-kinase catalytic subunit type 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001917180.1
SIO_010081: PIK3C3
so part of: PIK3C3
location: complement(join(14064528..14066934,14068477..14068567,14089504..14089578,14101780..14101864,14104445..14104509,14109885..14109954,14110506..14110634,14113083..14113214,14116033..14116149,14119386..14119491,14125796..14125863,14129061..14129151,14130750..14130904,14138495..14138680,14148056..14148148,14149286..14149390,14152698..14152769,14155387..14155482,14157577..14157663,14191776..14191905,14207548..14207691,14213234..14213422,14217599..14217759))
location: region:14064528-14217759:-1
so has part: feature:14217599-14217759:-1:exon
so has part: feature:14213234-14213422:-1:exon
so has part: feature:14207548-14207691:-1:exon
so has part: feature:14191776-14191905:-1:exon
so has part: feature:14157577-14157663:-1:exon
so has part: feature:14155387-14155482:-1:exon
so has part: feature:14152698-14152769:-1:exon
so has part: feature:14149286-14149390:-1:exon
so has part: feature:14148056-14148148:-1:exon
so has part: feature:14138495-14138680:-1:exon
so has part: feature:14130750-14130904:-1:exon
so has part: feature:14129061-14129151:-1:exon
so has part: feature:14125796-14125863:-1:exon
so has part: feature:14119386-14119491:-1:exon
so has part: feature:14116033-14116149:-1:exon
so has part: feature:14113083-14113214:-1:exon
so has part: feature:14110506-14110634:-1:exon
so has part: feature:14109885-14109954:-1:exon
so has part: feature:14104445-14104509:-1:exon
so has part: feature:14101780-14101864:-1:exon
so has part: feature:14089504-14089578:-1:exon
so has part: feature:14068477-14068567:-1:exon
so has part: feature:14064528-14066934:-1:exon

position:14064528:-1
position: 14064528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14217599-14217759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14213234-14213422:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14207548-14207691:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14191776-14191905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14157577-14157663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14155387-14155482:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14152698-14152769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14149286-14149390:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14148056-14148148:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14138495-14138680:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14130750-14130904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14129061-14129151:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14125796-14125863:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14119386-14119491:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14116033-14116149:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14113083-14113214:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14110506-14110634:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14109885-14109954:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14104445-14104509:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14101780-14101864:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14089504-14089578:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14068477-14068567:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14064528-14066934:-1:exon

position:14066934:-1
position: 14066934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIK3C3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PIK3C3
product: phosphatidylinositol 3-kinase catalytic subunit type 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_013974301.2
SIO_010081: PIK3C3
subclass of: SO_0000673
so part of: PIK3C3
location: complement(join(14064528..14066934,14068477..14068567,14075543..14075711,14089504..14089578,14101780..14101864,14104445..14104509,14109885..14109954,14110506..14110634,14113083..14113214,14116033..14116149,14119386..14119491,14125796..14125863,14129061..14129151,14130750..14130904,14138495..14138680,14148056..14148148,14149286..14149390,14152698..14152769,14155387..14155482,14157577..14157663,14191776..14191905,14207548..14207691,14213234..14213422,14217599..14217666))
location: region:14064528-14217666:-1
so has part: feature:14217599-14217666:-1:exon
so has part: feature:14213234-14213422:-1:exon
so has part: feature:14207548-14207691:-1:exon
so has part: feature:14191776-14191905:-1:exon
so has part: feature:14157577-14157663:-1:exon
so has part: feature:14155387-14155482:-1:exon
so has part: feature:14152698-14152769:-1:exon
so has part: feature:14149286-14149390:-1:exon
so has part: feature:14148056-14148148:-1:exon
so has part: feature:14138495-14138680:-1:exon
so has part: feature:14130750-14130904:-1:exon
so has part: feature:14129061-14129151:-1:exon
so has part: feature:14125796-14125863:-1:exon
so has part: feature:14119386-14119491:-1:exon
so has part: feature:14116033-14116149:-1:exon
so has part: feature:14113083-14113214:-1:exon
so has part: feature:14110506-14110634:-1:exon
so has part: feature:14109885-14109954:-1:exon
so has part: feature:14104445-14104509:-1:exon
so has part: feature:14101780-14101864:-1:exon
so has part: feature:14089504-14089578:-1:exon
so has part: feature:14075543-14075711:-1:exon
so has part: feature:14068477-14068567:-1:exon
so has part: feature:14064528-14066934:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14217599-14217666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14213234-14213422:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14207548-14207691:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14191776-14191905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14157577-14157663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14155387-14155482:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14152698-14152769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14149286-14149390:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14148056-14148148:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14138495-14138680:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14130750-14130904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14129061-14129151:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14125796-14125863:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14119386-14119491:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14116033-14116149:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14113083-14113214:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14110506-14110634:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14109885-14109954:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14104445-14104509:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14101780-14101864:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14089504-14089578:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14075543-14075711:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14068477-14068567:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14064528-14066934:-1:exon

PIK3C3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PIK3C3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3-kinase catalytic subunit type 3 isoform X2
translation: MGEAEKFHYVYSCDLDINVQLKIGSLEGKREQKSYKAVLEDPMLKFSGLYQETCSDLYVTCQVFAEGKPLALPVRTSYKAFSTRWNWNEWLKLPVKYPDLPRNAQVALTIWDVYGPGKAVPVGGTTVSLFGKYGMFRQGMHDLKVWPNVEADGSEPTKTPGRTSSTLSEDQMSRLAKLTKAHRQGHMVKVDWLDRLTFREIEMINESEKRSSNFMYLMVEFRCVKCDDKEYGIVYYEKDGDESSPILTSFEIVKVPDPQMSMENLVESKHHKLARSLRSGPSDHDLKPNAATRDQLNIIVSYPPTKQLTYEEQDLVWKFRYYLTNQEKALTKFLKCVNWDLPQEAKQALELLGKWKPMDVEDSLELLSSHYTNPTVRRYAVARLRQADDEDLLMYLLQLVQALKYENFDDIKNGLEPTKKDSQGSVSESVSNSGINSAEIDSSQIITSPLPPVSSPPSASKTKESSDGENLEQDLCTFLISRACKNSTLANYLYWYVIVECEDQDTQQRDPKTHEMYLNVMRRFSQALLKGDKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLTKTGKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKEALFQNSQPWPN
SIO_010081: PIK3C3
subclass of: SO_0000673
so part of: PIK3C3
location: complement(join(14066896..14066934,14068477..14068567,14075543..14075711,14089504..14089578,14101780..14101864,14104445..14104509,14109885..14109954,14110506..14110634,14113083..14113214,14116033..14116149,14119386..14119491,14125796..14125863,14129061..14129151,14130750..14130904,14138495..14138680,14148056..14148148,14149286..14149390,14152698..14152769,14155387..14155482,14157577..14157663,14191776..14191905,14207548..14207691,14213234..14213422,14217599..14217666))
location: region:14066896-14217666:-1
so has part: feature:14217599-14217666:-1:exon
so has part: feature:14213234-14213422:-1:exon
so has part: feature:14207548-14207691:-1:exon
so has part: feature:14191776-14191905:-1:exon
so has part: feature:14157577-14157663:-1:exon
so has part: feature:14155387-14155482:-1:exon
so has part: feature:14152698-14152769:-1:exon
so has part: feature:14149286-14149390:-1:exon
so has part: feature:14148056-14148148:-1:exon
so has part: feature:14138495-14138680:-1:exon
so has part: feature:14130750-14130904:-1:exon
so has part: feature:14129061-14129151:-1:exon
so has part: feature:14125796-14125863:-1:exon
so has part: feature:14119386-14119491:-1:exon
so has part: feature:14116033-14116149:-1:exon
so has part: feature:14113083-14113214:-1:exon
so has part: feature:14110506-14110634:-1:exon
so has part: feature:14109885-14109954:-1:exon
so has part: feature:14104445-14104509:-1:exon
so has part: feature:14101780-14101864:-1:exon
so has part: feature:14089504-14089578:-1:exon
so has part: feature:14075543-14075711:-1:exon
so has part: feature:14068477-14068567:-1:exon
so has part: feature:14066896-14066934:-1:exon

XP_013829755.1
type: Protein
SIO_000068: ncbiprotein

position:14066896:-1
position: 14066896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14217599-14217666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14213234-14213422:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14207548-14207691:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14191776-14191905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14157577-14157663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14155387-14155482:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14152698-14152769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14149286-14149390:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14148056-14148148:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14138495-14138680:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14130750-14130904:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14129061-14129151:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14125796-14125863:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14119386-14119491:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14116033-14116149:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14113083-14113214:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14110506-14110634:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14109885-14109954:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14104445-14104509:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14101780-14101864:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14089504-14089578:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14075543-14075711:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:14068477-14068567:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:14066896-14066934:-1:exon

TRNAW-CCA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAW-CCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 14293884..14293955
location: region:14293884-14293955:1
so has part: feature:14293884-14293955:1:exon
subclass of: SO_0000663

108633836
type: Gene
SIO_000068: ncbigene

position:14293884:1
position: 14293884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14293955:1
position: 14293955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14293884-14293955:1:exon

TRNAW-CCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAW-CCA
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tryptophan (anticodon CCA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:14293917..14293919,aa:Trp,seq:cca)
SIO_010081: TRNAW-CCA
subclass of: SO_0000673
so part of: TRNAW-CCA
location: 14293884..14293955
location: region:14293884-14293955:1
so has part: feature:14293884-14293955:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14293884-14293955:1:exon

LOC102182184
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102182184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(15179071..15180023)
location: region:15179071-15180023:-1
so has part: feature:15179071-15180023:-1:exon

102182184
type: Gene
SIO_000068: ncbigene

position:15179071:-1
position: 15179071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15180023:-1
position: 15180023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15179071-15180023:-1:exon

LOC102182184
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102182184
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC102182184
subclass of: SO_0000673
so part of: LOC102182184
location: complement(15179071..15180023)
location: region:15179071-15180023:-1
so has part: feature:15179071-15180023:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15179071-15180023:-1:exon

LOC102182463
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102182463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(16263703..16264546)
location: region:16263703-16264546:-1
so has part: feature:16263703-16264546:-1:exon

102182463
type: Gene
SIO_000068: ncbigene

position:16263703:-1
position: 16263703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16264546:-1
position: 16264546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16263703-16264546:-1:exon

LOC102182463
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102182463
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102182463
subclass of: SO_0000673
so part of: LOC102182463
location: complement(16263703..16264546)
location: region:16263703-16264546:-1
so has part: feature:16263703-16264546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16263703-16264546:-1:exon

LOC102183028
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102183028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 17398300..17399049
location: region:17398300-17399049:1
so has part: feature:17398300-17399049:1:exon

102183028
type: Gene
SIO_000068: ncbigene

position:17398300:1
position: 17398300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17399049:1
position: 17399049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17398300-17399049:1:exon

LOC102183028
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9925
gene: LOC102183028
product: peptidyl-prolyl cis-trans isomerase A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 30 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_001297217.2
SIO_010081: LOC102183028
so part of: LOC102183028
location: 17398300..17399049
location: region:17398300-17399049:1
so has part: feature:17398300-17399049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17398300-17399049:1:exon

TRNAS-GGA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAS-GGA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 17691705..17691776
location: region:17691705-17691776:1
so has part: feature:17691705-17691776:1:exon
subclass of: SO_0000663

108633837
type: Gene
SIO_000068: ncbigene

position:17691705:1
position: 17691705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17691776:1
position: 17691776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17691705-17691776:1:exon

TRNAS-GGA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAS-GGA
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon GGA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:17691738..17691740,aa:Ser,seq:gga)
SIO_010081: TRNAS-GGA
subclass of: SO_0000673
so part of: TRNAS-GGA
location: 17691705..17691776
location: region:17691705-17691776:1
so has part: feature:17691705-17691776:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17691705-17691776:1:exon

CELF4
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 19789280..20104642
location: region:19789280-20104642:1
so has part: feature:19789280-20104642:1:exon
subclass of: SO_0000010

102183284
type: Gene
SIO_000068: ncbigene

position:19789280:1
position: 19789280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20104642:1
position: 20104642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19789280-20104642:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CELF4
product: CUGBP, Elav-like family member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 43 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018039731.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(19789280..19789943,19870117..19870199,20029612..20029690,20073218..20073346,20073815..20073894,20074320..20074463,20075329..20075476,20077253..20077402,20081707..20081772,20083278..20083361,20088238..20088381,20093792..20093963,20102596..20104642)
location: region:19789280-20104642:1
so has part: feature:19789280-19789943:1:exon
so has part: feature:19870117-19870199:1:exon
so has part: feature:20029612-20029690:1:exon
so has part: feature:20073218-20073346:1:exon
so has part: feature:20073815-20073894:1:exon
so has part: feature:20074320-20074463:1:exon
so has part: feature:20075329-20075476:1:exon
so has part: feature:20077253-20077402:1:exon
so has part: feature:20081707-20081772:1:exon
so has part: feature:20083278-20083361:1:exon
so has part: feature:20088238-20088381:1:exon
so has part: feature:20093792-20093963:1:exon
so has part: feature:20102596-20104642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19789280-19789943:1:exon

position:19789943:1
position: 19789943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19870117-19870199:1:exon

position:19870117:1
position: 19870117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19870199:1
position: 19870199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:20029612-20029690:1:exon

position:20029612:1
position: 20029612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20029690:1
position: 20029690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:20073218-20073346:1:exon

position:20073218:1
position: 20073218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20073346:1
position: 20073346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:20073815-20073894:1:exon

position:20073815:1
position: 20073815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20073894:1
position: 20073894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:20074320-20074463:1:exon

position:20074320:1
position: 20074320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20074463:1
position: 20074463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:20075329-20075476:1:exon

position:20075329:1
position: 20075329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20075476:1
position: 20075476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:20077253-20077402:1:exon

position:20077253:1
position: 20077253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20077402:1
position: 20077402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:20081707-20081772:1:exon

position:20081707:1
position: 20081707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20081772:1
position: 20081772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:20083278-20083361:1:exon

position:20083278:1
position: 20083278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20083361:1
position: 20083361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:20088238-20088381:1:exon

position:20088238:1
position: 20088238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20088381:1
position: 20088381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:20093792-20093963:1:exon

position:20093792:1
position: 20093792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20093963:1
position: 20093963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:20102596-20104642:1:exon

position:20102596:1
position: 20102596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CELF4
product: CUGBP, Elav-like family member 4, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 43 ESTs, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018039744.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(19789280..19789943,19870117..19870199,20029612..20029690,20073218..20073346,20073815..20073894,20074320..20074463,20075329..20075476,20077253..20077402,20081707..20081772,20083278..20083361,20088238..20088321,20093792..20093963,20102596..20104642)
location: region:19789280-20104642:1
so has part: feature:19789280-19789943:1:exon
so has part: feature:19870117-19870199:1:exon
so has part: feature:20029612-20029690:1:exon
so has part: feature:20073218-20073346:1:exon
so has part: feature:20073815-20073894:1:exon
so has part: feature:20074320-20074463:1:exon
so has part: feature:20075329-20075476:1:exon
so has part: feature:20077253-20077402:1:exon
so has part: feature:20081707-20081772:1:exon
so has part: feature:20083278-20083361:1:exon
so has part: feature:20088238-20088321:1:exon
so has part: feature:20093792-20093963:1:exon
so has part: feature:20102596-20104642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19789280-19789943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19870117-19870199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20029612-20029690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20073218-20073346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20073815-20073894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20074320-20074463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20075329-20075476:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:20077253-20077402:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:20081707-20081772:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:20083278-20083361:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:20088238-20088321:1:exon

position:20088321:1
position: 20088321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:20093792-20093963:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:20102596-20104642:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CELF4
product: CUGBP, Elav-like family member 4, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 43 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018039749.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(19789280..19789943,19870117..19870199,20029612..20029690,20073218..20073346,20073815..20073894,20074320..20074463,20075329..20075476,20077253..20077402,20081707..20081772,20083278..20083361,20093792..20093963,20102596..20104642)
location: region:19789280-20104642:1
so has part: feature:19789280-19789943:1:exon
so has part: feature:19870117-19870199:1:exon
so has part: feature:20029612-20029690:1:exon
so has part: feature:20073218-20073346:1:exon
so has part: feature:20073815-20073894:1:exon
so has part: feature:20074320-20074463:1:exon
so has part: feature:20075329-20075476:1:exon
so has part: feature:20077253-20077402:1:exon
so has part: feature:20081707-20081772:1:exon
so has part: feature:20083278-20083361:1:exon
so has part: feature:20093792-20093963:1:exon
so has part: feature:20102596-20104642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19789280-19789943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19870117-19870199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20029612-20029690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20073218-20073346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20073815-20073894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20074320-20074463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20075329-20075476:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:20077253-20077402:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:20081707-20081772:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:20083278-20083361:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:20093792-20093963:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:20102596-20104642:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CELF4
product: CUGBP, Elav-like family member 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 43 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018039735.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(19789280..19789943,19870117..19870199,20029612..20029690,20073218..20073346,20073815..20073894,20074320..20074463,20075329..20075476,20077253..20077402,20081707..20081772,20083281..20083361,20088238..20088381,20093792..20093963,20102596..20104642)
location: region:19789280-20104642:1
so has part: feature:19789280-19789943:1:exon
so has part: feature:19870117-19870199:1:exon
so has part: feature:20029612-20029690:1:exon
so has part: feature:20073218-20073346:1:exon
so has part: feature:20073815-20073894:1:exon
so has part: feature:20074320-20074463:1:exon
so has part: feature:20075329-20075476:1:exon
so has part: feature:20077253-20077402:1:exon
so has part: feature:20081707-20081772:1:exon
so has part: feature:20083281-20083361:1:exon
so has part: feature:20088238-20088381:1:exon
so has part: feature:20093792-20093963:1:exon
so has part: feature:20102596-20104642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19789280-19789943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19870117-19870199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20029612-20029690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20073218-20073346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20073815-20073894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20074320-20074463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20075329-20075476:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:20077253-20077402:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:20081707-20081772:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:20083281-20083361:1:exon