Capra hircus breed San Clemente chromosome 20, ASM170441v1, whole genome shotgun sequence.
type: Entry
definition: Capra hircus breed San Clemente chromosome 20, ASM170441v1, whole genome shotgun sequence.
sequence version: NC_030827.1
sequence date: 2016-09-08
sequence: sequence
division: CON
label: NC_030827.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA340281
dblink: SAMN03863711
keyword: WGS
keyword: RefSeq
source: Capra hircus (goat)
organism: Capra hircus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra.
reference: 1
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM004581.1.\nAssembly name: ASM170441v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the USDA ARS on 2016/08/24. The\noriginal whole-genome shotgun project has the accession\nLWLT00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: USDA ARS\nAssembly Date :: MAR-2016\nAssembly Method :: Celera Assembler v. 8.2; BioNano Genomics\n Irys v. APRIL-2015; Lachesis Hi-C v.\n JUNE-2015\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Capra hircus Annotation Release 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 71784255
topology: linear
so has quality: SO_0000987
location: 1..71784255
location: region:1-71784255:1
RO_0002162: 9925

NC_030827
type: RefSeq
SIO_000068: refseq

PRJNA340281
type: BioProject
SIO_000068: bioproject

SAMN03863711
type: BioSample
SIO_000068: biosample

1
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71784255:1
position: 71784255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-71784255:1:source
so part of: sequence
organism: Capra hircus
mol type: genomic DNA
chromosome: 20
sex: male
tissue type: blood
dev stage: adult
breed: San Clemente

9925
type: Taxonomy
SIO_000068: taxonomy

LOC108638400
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108638400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(61282..88004)
location: region:61282-88004:-1
so has part: feature:61282-88004:-1:exon

108638400
type: Gene
SIO_000068: ncbigene

position:61282:-1
position: 61282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88004:-1
position: 88004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61282-88004:-1:exon

LOC108638400
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108638400
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC108638400
subclass of: SO_0000673
so part of: LOC108638400
location: complement(61282..61485)
location: region:61282-61485:-1
so has part: feature:61282-61485:-1:exon

position:61485:-1
position: 61485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61282-61485:-1:exon

LOC108638400
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108638400
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC108638400
subclass of: SO_0000673
so part of: LOC108638400
location: complement(68863..69068)
location: region:68863-69068:-1
so has part: feature:68863-69068:-1:exon

position:68863:-1
position: 68863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69068:-1
position: 69068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68863-69068:-1:exon

LOC108638400
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC108638400
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC108638400
subclass of: SO_0000673
so part of: LOC108638400
location: complement(87906..88004)
location: region:87906-88004:-1
so has part: feature:87906-88004:-1:exon

position:87906:-1
position: 87906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87906-88004:-1:exon

LOC108638417
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108638417
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 110412..113747
location: region:110412-113747:1
so has part: feature:110412-113747:1:exon
subclass of: SO_0000011

108638417
type: Gene
SIO_000068: ncbigene

position:110412:1
position: 110412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113747:1
position: 113747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110412-113747:1:exon

LOC108638417
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108638417
product: uncharacterized LOC108638417
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001919811.1
SIO_010081: LOC108638417
subclass of: SO_0000673
so part of: LOC108638417
location: join(110412..110933,113382..113411,113727..113747)
location: region:110412-113747:1
so has part: feature:110412-110933:1:exon
so has part: feature:113382-113411:1:exon
so has part: feature:113727-113747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110412-110933:1:exon

position:110933:1
position: 110933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113382-113411:1:exon

position:113382:1
position: 113382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113411:1
position: 113411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:113727-113747:1:exon

position:113727:1
position: 113727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106503309
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503309
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 113779..119329
location: region:113779-119329:1
so has part: feature:113779-119329:1:exon
subclass of: SO_0000011

106503309
type: Gene
SIO_000068: ncbigene

position:113779:1
position: 113779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119329:1
position: 119329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113779-119329:1:exon

LOC106503309
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503309
product: uncharacterized LOC106503309
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001296954.2
SIO_010081: LOC106503309
subclass of: SO_0000673
so part of: LOC106503309
location: join(113779..113820,115976..116127,116932..117104,118410..119329)
location: region:113779-119329:1
so has part: feature:113779-113820:1:exon
so has part: feature:115976-116127:1:exon
so has part: feature:116932-117104:1:exon
so has part: feature:118410-119329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113779-113820:1:exon

position:113820:1
position: 113820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115976-116127:1:exon

position:115976:1
position: 115976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116127:1
position: 116127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116932-117104:1:exon

position:116932:1
position: 116932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117104:1
position: 117104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:118410-119329:1:exon

position:118410:1
position: 118410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102177000
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102177000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(273701..274647)
location: region:273701-274647:-1
so has part: feature:273701-274647:-1:exon

102177000
type: Gene
SIO_000068: ncbigene

position:273701:-1
position: 273701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274647:-1
position: 274647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273701-274647:-1:exon

LOC102177000
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102177000
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC102177000
subclass of: SO_0000673
so part of: LOC102177000
location: complement(273701..274647)
location: region:273701-274647:-1
so has part: feature:273701-274647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273701-274647:-1:exon

LOC106503298
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503298
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(281682..282622)
location: region:281682-282622:-1
so has part: feature:281682-282622:-1:exon

106503298
type: Gene
SIO_000068: ncbigene

position:281682:-1
position: 281682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282622:-1
position: 282622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281682-282622:-1:exon

LOC106503298
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC106503298
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC106503298
subclass of: SO_0000673
so part of: LOC106503298
location: complement(281682..282622)
location: region:281682-282622:-1
so has part: feature:281682-282622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281682-282622:-1:exon

SPZ1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SPZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 329108..330807
location: region:329108-330807:1
so has part: feature:329108-330807:1:exon
subclass of: SO_0000010

102182067
type: Gene
SIO_000068: ncbigene

position:329108:1
position: 329108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330807:1
position: 330807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329108-330807:1:exon

SPZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SPZ1
product: spermatogenic leucine zipper 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 5 Proteins
transcript id: XM_005694508.2
SIO_010081: SPZ1
subclass of: SO_0000673
so part of: SPZ1
location: 329108..330807
location: region:329108-330807:1
so has part: feature:329108-330807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329108-330807:1:exon

SPZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SPZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenic leucine zipper protein 1
translation: MEVPTPSKTLKPPDLNEESLDPRILIALFEIGSLPPVSCSSLPSLKSSDHEATEQRIAKKFESLLKEIKDIVKHVTSYEQKVTETKESFKETNMSEVTELREKIVELDEINKVLVKKLLASLDLGKKENAKKQEMRLDNQKSEDTVQDCSRDLVNCSKGQNALPETQLSKEKAKHRFPDIQEENTRLRNNMEQLLQEAEHWSVEHTELSKLIKSYQESQNDINTLKNNGTHSLTQTNNESAKQELEEQVKRLRRDTYVLHLIATLLESECQILEQRVELLDELHHQKEEPLQGEPVQINHKQNDKEQKPPEADEVKVHEKNTPEVEGTFHKRDQFFRSLDICHNKKAHNNQFNTRIAKRALVVKRPASSLS
SIO_010081: SPZ1
subclass of: SO_0000673
so part of: SPZ1
location: 329358..330473
location: region:329358-330473:1
so has part: feature:329358-330473:1:exon

XP_005694565.2
type: Protein
SIO_000068: ncbiprotein

position:329358:1
position: 329358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330473:1
position: 330473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329358-330473:1:exon

LOC102182345
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102182345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 346917..348046
location: region:346917-348046:1
so has part: feature:346917-348046:1:exon

102182345
type: Gene
SIO_000068: ncbigene

position:346917:1
position: 346917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348046:1
position: 348046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346917-348046:1:exon

LOC102182345
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9925
gene: LOC102182345
product: POU domain, class 5, transcription factor 1 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_001919779.1
SIO_010081: LOC102182345
so part of: LOC102182345
location: 346917..348046
location: region:346917-348046:1
so has part: feature:346917-348046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346917-348046:1:exon

PANK3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: PANK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(356690..381538)
location: region:356690-381538:-1
so has part: feature:356690-381538:-1:exon
subclass of: SO_0000010

102182632
type: Gene
SIO_000068: ncbigene

position:356690:-1
position: 356690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381538:-1
position: 381538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356690-381538:-1:exon

PANK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PANK3
product: pantothenate kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 37 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005694509.3
SIO_010081: PANK3
subclass of: SO_0000673
so part of: PANK3
location: complement(join(356690..360797,362171..362296,367029..367152,368107..368283,370295..370548,374657..375009,381104..381538))
location: region:356690-381538:-1
so has part: feature:381104-381538:-1:exon
so has part: feature:374657-375009:-1:exon
so has part: feature:370295-370548:-1:exon
so has part: feature:368107-368283:-1:exon
so has part: feature:367029-367152:-1:exon
so has part: feature:362171-362296:-1:exon
so has part: feature:356690-360797:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381104-381538:-1:exon

position:381104:-1
position: 381104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:374657-375009:-1:exon

position:374657:-1
position: 374657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375009:-1
position: 375009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:370295-370548:-1:exon

position:370295:-1
position: 370295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370548:-1
position: 370548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:368107-368283:-1:exon

position:368107:-1
position: 368107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368283:-1
position: 368283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:367029-367152:-1:exon

position:367029:-1
position: 367029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367152:-1
position: 367152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:362171-362296:-1:exon

position:362171:-1
position: 362171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362296:-1
position: 362296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:356690-360797:-1:exon

position:360797:-1
position: 360797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PANK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PANK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pantothenate kinase 3
translation: MKIKDAKKPSFPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLHTVLCATGGGAYKFEKDFRTIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADRLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSIARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGLPNFS
SIO_010081: PANK3
subclass of: SO_0000673
so part of: PANK3
location: complement(join(360747..360797,362171..362296,367029..367152,368107..368283,370295..370548,374657..375009,381104..381131))
location: region:360747-381131:-1
so has part: feature:381104-381131:-1:exon
so has part: feature:374657-375009:-1:exon
so has part: feature:370295-370548:-1:exon
so has part: feature:368107-368283:-1:exon
so has part: feature:367029-367152:-1:exon
so has part: feature:362171-362296:-1:exon
so has part: feature:360747-360797:-1:exon

XP_005694566.1
type: Protein
SIO_000068: ncbiprotein

position:360747:-1
position: 360747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381131:-1
position: 381131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381104-381131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:374657-375009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370295-370548:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:368107-368283:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367029-367152:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:362171-362296:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:360747-360797:-1:exon

SLIT3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SLIT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(506254..1225801)
location: region:506254-1225801:-1
so has part: feature:506254-1225801:-1:exon
subclass of: SO_0000010

102177280
type: Gene
SIO_000068: ncbigene

position:506254:-1
position: 506254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225801:-1
position: 1225801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506254-1225801:-1:exon

SLIT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SLIT3
product: slit guidance ligand 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 27 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_018065519.1
SIO_010081: SLIT3
subclass of: SO_0000673
so part of: SLIT3
location: complement(join(506254..506845,509713..509921,511166..511451,512058..512212,527975..528105,530072..530312,531787..531924,538986..539079,541069..541208,545045..545142,554274..554398,556392..556555,558895..558966,569668..569739,570542..570613,572512..572580,592981..593113,594289..594452,597554..597697,598485..598628,607602..607676,608865..609015,620413..620576,621987..622130,637238..637309,640939..641010,646938..647009,660487..660628,670557..670720,678866..678937,703927..703998,748922..748993,1095164..1095235,1163151..1163222,1171498..1171569,1225176..1225801))
location: region:506254-1225801:-1
so has part: feature:1225176-1225801:-1:exon
so has part: feature:1171498-1171569:-1:exon
so has part: feature:1163151-1163222:-1:exon
so has part: feature:1095164-1095235:-1:exon
so has part: feature:748922-748993:-1:exon
so has part: feature:703927-703998:-1:exon
so has part: feature:678866-678937:-1:exon
so has part: feature:670557-670720:-1:exon
so has part: feature:660487-660628:-1:exon
so has part: feature:646938-647009:-1:exon
so has part: feature:640939-641010:-1:exon
so has part: feature:637238-637309:-1:exon
so has part: feature:621987-622130:-1:exon
so has part: feature:620413-620576:-1:exon
so has part: feature:608865-609015:-1:exon
so has part: feature:607602-607676:-1:exon
so has part: feature:598485-598628:-1:exon
so has part: feature:597554-597697:-1:exon
so has part: feature:594289-594452:-1:exon
so has part: feature:592981-593113:-1:exon
so has part: feature:572512-572580:-1:exon
so has part: feature:570542-570613:-1:exon
so has part: feature:569668-569739:-1:exon
so has part: feature:558895-558966:-1:exon
so has part: feature:556392-556555:-1:exon
so has part: feature:554274-554398:-1:exon
so has part: feature:545045-545142:-1:exon
so has part: feature:541069-541208:-1:exon
so has part: feature:538986-539079:-1:exon
so has part: feature:531787-531924:-1:exon
so has part: feature:530072-530312:-1:exon
so has part: feature:527975-528105:-1:exon
so has part: feature:512058-512212:-1:exon
so has part: feature:511166-511451:-1:exon
so has part: feature:509713-509921:-1:exon
so has part: feature:506254-506845:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225176-1225801:-1:exon

position:1225176:-1
position: 1225176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1171498-1171569:-1:exon

position:1171498:-1
position: 1171498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171569:-1
position: 1171569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1163151-1163222:-1:exon

position:1163151:-1
position: 1163151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163222:-1
position: 1163222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1095164-1095235:-1:exon

position:1095164:-1
position: 1095164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095235:-1
position: 1095235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:748922-748993:-1:exon

position:748922:-1
position: 748922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748993:-1
position: 748993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:703927-703998:-1:exon

position:703927:-1
position: 703927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703998:-1
position: 703998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:678866-678937:-1:exon

position:678866:-1
position: 678866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678937:-1
position: 678937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:670557-670720:-1:exon

position:670557:-1
position: 670557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670720:-1
position: 670720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:660487-660628:-1:exon

position:660487:-1
position: 660487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660628:-1
position: 660628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:646938-647009:-1:exon

position:646938:-1
position: 646938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647009:-1
position: 647009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:640939-641010:-1:exon

position:640939:-1
position: 640939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641010:-1
position: 641010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:637238-637309:-1:exon

position:637238:-1
position: 637238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637309:-1
position: 637309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:621987-622130:-1:exon

position:621987:-1
position: 621987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622130:-1
position: 622130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:620413-620576:-1:exon

position:620413:-1
position: 620413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620576:-1
position: 620576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:608865-609015:-1:exon

position:608865:-1
position: 608865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609015:-1
position: 609015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:607602-607676:-1:exon

position:607602:-1
position: 607602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607676:-1
position: 607676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:598485-598628:-1:exon

position:598485:-1
position: 598485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598628:-1
position: 598628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:597554-597697:-1:exon

position:597554:-1
position: 597554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597697:-1
position: 597697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:594289-594452:-1:exon

position:594289:-1
position: 594289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594452:-1
position: 594452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:592981-593113:-1:exon

position:592981:-1
position: 592981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593113:-1
position: 593113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:572512-572580:-1:exon

position:572512:-1
position: 572512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572580:-1
position: 572580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:570542-570613:-1:exon

position:570542:-1
position: 570542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570613:-1
position: 570613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:569668-569739:-1:exon

position:569668:-1
position: 569668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569739:-1
position: 569739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:558895-558966:-1:exon

position:558895:-1
position: 558895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558966:-1
position: 558966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:556392-556555:-1:exon

position:556392:-1
position: 556392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556555:-1
position: 556555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:554274-554398:-1:exon

position:554274:-1
position: 554274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554398:-1
position: 554398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:545045-545142:-1:exon

position:545045:-1
position: 545045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545142:-1
position: 545142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:541069-541208:-1:exon

position:541069:-1
position: 541069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541208:-1
position: 541208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:538986-539079:-1:exon

position:538986:-1
position: 538986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539079:-1
position: 539079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:531787-531924:-1:exon

position:531787:-1
position: 531787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531924:-1
position: 531924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:530072-530312:-1:exon

position:530072:-1
position: 530072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530312:-1
position: 530312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:527975-528105:-1:exon

position:527975:-1
position: 527975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528105:-1
position: 528105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:512058-512212:-1:exon

position:512058:-1
position: 512058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512212:-1
position: 512212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:511166-511451:-1:exon

position:511166:-1
position: 511166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511451:-1
position: 511451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:509713-509921:-1:exon

position:509713:-1
position: 509713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509921:-1
position: 509921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:506254-506845:-1:exon

position:506845:-1
position: 506845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLIT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SLIT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: slit homolog 3 protein
translation: MAPGRTGAGAAVRARLMLALALASVLSGPPAAACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKTDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSNLKLTRLDLSENQILGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFSVADVQKKEYVCPGPHSEPPTCNANSISCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPDRCRCEGTIVDCSNQKLARVPSHLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAASVQELMLTGNQLEAVHGRVFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGNDESSCQLGPPCPEQCTCVETVVRCSNRGLRALPKGIPKDVTELYLEGNHLTAVPKELSSLRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKGPVDINIVAKCDPCLSSPCKNNGSCSQDPVERHRCACPHGYQGRDCTVPINTCIQNPCLHGGTCHLSETHKGGFSCSCPLGFEGQRCEINPDDCEDNDCENNATCVDGVNNYACVCPPNYTGELCDEVIDHCVPGMNLCQHEAKCVPLDRGFRCECLPGYSGKLCEVDDDDCAAHRCRHGAQCVDAVNGYTCVCPQGFSGLHCEHPPPMVLLQTSPCDQYECQNGAQCIVVQQEPTCRCPPGFVGPRCEKLITVNFVGKDSYVELASAKVRPQANISLQVATDKDNGILLYKGDNDPLALELYQGHVRLVYDSLSSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQKQPAVSINSPLYLGGIPTSTGLSALRQGTDRPLGGFHGCIHEVRINNELQDFKALPPQALGVSPGCKSCSVCRHGLCRAVEKDSVVCECHPGWAGPLCDQEARDPCLGHSCVQGKCVASGTSYVCRCTEGYGGALCDQKNDSNSACSTFKCHQGQCHISDRGEPYCLCQPGFSGEHCEQEMPCLGEVVREVIRRQKGYASCATASKIPVMECRGGCGPQCCQPTRSKRRKYVFQCTDGSSFVEELERHLECGCRPCS
SIO_010081: SLIT3
subclass of: SO_0000673
so part of: SLIT3
location: complement(join(506610..506845,509713..509921,511166..511451,512058..512212,527975..528105,530072..530312,531787..531924,538986..539079,541069..541208,545045..545142,554274..554398,556392..556555,558895..558966,569668..569739,570542..570613,572512..572580,592981..593113,594289..594452,597554..597697,598485..598628,607602..607676,608865..609015,620413..620576,621987..622130,637238..637309,640939..641010,646938..647009,660487..660628,670557..670720,678866..678937,703927..703998,748922..748993,1095164..1095235,1163151..1163222,1171498..1171569,1225176..1225372))
location: region:506610-1225372:-1
so has part: feature:1225176-1225372:-1:exon
so has part: feature:1171498-1171569:-1:exon
so has part: feature:1163151-1163222:-1:exon
so has part: feature:1095164-1095235:-1:exon
so has part: feature:748922-748993:-1:exon
so has part: feature:703927-703998:-1:exon
so has part: feature:678866-678937:-1:exon
so has part: feature:670557-670720:-1:exon
so has part: feature:660487-660628:-1:exon
so has part: feature:646938-647009:-1:exon
so has part: feature:640939-641010:-1:exon
so has part: feature:637238-637309:-1:exon
so has part: feature:621987-622130:-1:exon
so has part: feature:620413-620576:-1:exon
so has part: feature:608865-609015:-1:exon
so has part: feature:607602-607676:-1:exon
so has part: feature:598485-598628:-1:exon
so has part: feature:597554-597697:-1:exon
so has part: feature:594289-594452:-1:exon
so has part: feature:592981-593113:-1:exon
so has part: feature:572512-572580:-1:exon
so has part: feature:570542-570613:-1:exon
so has part: feature:569668-569739:-1:exon
so has part: feature:558895-558966:-1:exon
so has part: feature:556392-556555:-1:exon
so has part: feature:554274-554398:-1:exon
so has part: feature:545045-545142:-1:exon
so has part: feature:541069-541208:-1:exon
so has part: feature:538986-539079:-1:exon
so has part: feature:531787-531924:-1:exon
so has part: feature:530072-530312:-1:exon
so has part: feature:527975-528105:-1:exon
so has part: feature:512058-512212:-1:exon
so has part: feature:511166-511451:-1:exon
so has part: feature:509713-509921:-1:exon
so has part: feature:506610-506845:-1:exon

XP_017921008.1
type: Protein
SIO_000068: ncbiprotein

position:506610:-1
position: 506610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225372:-1
position: 1225372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225176-1225372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1171498-1171569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1163151-1163222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1095164-1095235:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748922-748993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703927-703998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:678866-678937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670557-670720:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660487-660628:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:646938-647009:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:640939-641010:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:637238-637309:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:621987-622130:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:620413-620576:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:608865-609015:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:607602-607676:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:598485-598628:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:597554-597697:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:594289-594452:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:592981-593113:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:572512-572580:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:570542-570613:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:569668-569739:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:558895-558966:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:556392-556555:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:554274-554398:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:545045-545142:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:541069-541208:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:538986-539079:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:531787-531924:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:530072-530312:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:527975-528105:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:512058-512212:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:511166-511451:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:509713-509921:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:506610-506845:-1:exon

MIR218
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
alternative label: chi-mir-218
gene: MIR218
gene synonym: chi-mir-218
note: microRNA 218; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(614591..614700)
location: region:614591-614700:-1
so has part: feature:614591-614700:-1:exon
subclass of: SO_0000571

104797255
type: Gene
SIO_000068: ncbigene

MI0030694
type: miRBase
SIO_000068: mirbase

position:614591:-1
position: 614591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614700:-1
position: 614700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614591-614700:-1:exon

MIR218
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9925
alternative label: chi-mir-218
gene: MIR218
gene synonym: chi-mir-218
product: microRNA 218
inference: similar to RNA sequence (same species):RefSeq:NR_129654.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_129654.1
SIO_010081: MIR218
subclass of: SO_0000673
so part of: MIR218
location: complement(614591..614700)
location: region:614591-614700:-1
so has part: feature:614591-614700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614591-614700:-1:exon

MIR218
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
alternative label: chi-mir-218
nc RNA class: miRNA
gene: MIR218
gene synonym: chi-mir-218
product: chi-miR-218
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR218
subclass of: SO_0000673
so part of: MIR218
location: complement(614656..614676)
location: region:614656-614676:-1
so has part: feature:614656-614676:-1:exon

MIMAT0036066
type: miRBase
SIO_000068: mirbase

position:614656:-1
position: 614656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614676:-1
position: 614676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614656-614676:-1:exon

LOC102183103
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102183103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1224372..1238708
location: region:1224372-1238708:1
so has part: feature:1224372-1238708:1:exon
subclass of: SO_0000011

102183103
type: Gene
SIO_000068: ncbigene

position:1224372:1
position: 1224372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238708:1
position: 1238708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224372-1238708:1:exon

LOC102183103
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102183103
product: uncharacterized LOC102183103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_310849.3
SIO_010081: LOC102183103
subclass of: SO_0000673
so part of: LOC102183103
location: join(1224372..1225133,1226276..1226440,1238672..1238708)
location: region:1224372-1238708:1
so has part: feature:1224372-1225133:1:exon
so has part: feature:1226276-1226440:1:exon
so has part: feature:1238672-1238708:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1224372-1225133:1:exon

position:1225133:1
position: 1225133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1226276-1226440:1:exon

position:1226276:1
position: 1226276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226440:1
position: 1226440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1238672-1238708:1:exon

position:1238672:1
position: 1238672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC108638418
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108638418
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1273497..1548438)
location: region:1273497-1548438:-1
so has part: feature:1273497-1548438:-1:exon
subclass of: SO_0000011

108638418
type: Gene
SIO_000068: ncbigene

position:1273497:-1
position: 1273497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548438:-1
position: 1548438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1273497-1548438:-1:exon

LOC108638418
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108638418
product: uncharacterized LOC108638418, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001919813.1
SIO_010081: LOC108638418
subclass of: SO_0000673
so part of: LOC108638418
location: complement(join(1273497..1273555,1476937..1477013,1546670..1546716,1548336..1548438))
location: region:1273497-1548438:-1
so has part: feature:1548336-1548438:-1:exon
so has part: feature:1546670-1546716:-1:exon
so has part: feature:1476937-1477013:-1:exon
so has part: feature:1273497-1273555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1548336-1548438:-1:exon

position:1548336:-1
position: 1548336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1546670-1546716:-1:exon

position:1546670:-1
position: 1546670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1546716:-1
position: 1546716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1476937-1477013:-1:exon

position:1476937:-1
position: 1476937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1477013:-1
position: 1477013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1273497-1273555:-1:exon

position:1273555:-1
position: 1273555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC108638418
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108638418
product: uncharacterized LOC108638418, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_001919812.1
SIO_010081: LOC108638418
subclass of: SO_0000673
so part of: LOC108638418
location: complement(join(1473146..1473407,1474102..1474235,1476937..1477013,1546670..1546716,1548336..1548438))
location: region:1473146-1548438:-1
so has part: feature:1548336-1548438:-1:exon
so has part: feature:1546670-1546716:-1:exon
so has part: feature:1476937-1477013:-1:exon
so has part: feature:1474102-1474235:-1:exon
so has part: feature:1473146-1473407:-1:exon

position:1473146:-1
position: 1473146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1548336-1548438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1546670-1546716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1476937-1477013:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1474102-1474235:-1:exon

position:1474102:-1
position: 1474102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1474235:-1
position: 1474235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1473146-1473407:-1:exon

position:1473407:-1
position: 1473407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPDL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1548510..1581442
location: region:1548510-1581442:1
so has part: feature:1548510-1581442:1:exon
subclass of: SO_0000010

102183456
type: Gene
SIO_000068: ncbigene

position:1548510:1
position: 1548510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581442:1
position: 1581442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1548510-1581442:1:exon

SPDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SPDL1
product: spindle apparatus coiled-coil protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005694511.3
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1548510..1548656,1555267..1555441,1556981..1557157,1559147..1559338,1561601..1561750,1561851..1561949,1562026..1562136,1564291..1564431,1570371..1570474,1571040..1571227,1574560..1574902,1580767..1581442)
location: region:1548510-1581442:1
so has part: feature:1548510-1548656:1:exon
so has part: feature:1555267-1555441:1:exon
so has part: feature:1556981-1557157:1:exon
so has part: feature:1559147-1559338:1:exon
so has part: feature:1561601-1561750:1:exon
so has part: feature:1561851-1561949:1:exon
so has part: feature:1562026-1562136:1:exon
so has part: feature:1564291-1564431:1:exon
so has part: feature:1570371-1570474:1:exon
so has part: feature:1571040-1571227:1:exon
so has part: feature:1574560-1574902:1:exon
so has part: feature:1580767-1581442:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1548510-1548656:1:exon

position:1548656:1
position: 1548656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1555267-1555441:1:exon

position:1555267:1
position: 1555267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1555441:1
position: 1555441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1556981-1557157:1:exon

position:1556981:1
position: 1556981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1557157:1
position: 1557157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1559147-1559338:1:exon

position:1559147:1
position: 1559147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1559338:1
position: 1559338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1561601-1561750:1:exon

position:1561601:1
position: 1561601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561750:1
position: 1561750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1561851-1561949:1:exon

position:1561851:1
position: 1561851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561949:1
position: 1561949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1562026-1562136:1:exon

position:1562026:1
position: 1562026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562136:1
position: 1562136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1564291-1564431:1:exon

position:1564291:1
position: 1564291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564431:1
position: 1564431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1570371-1570474:1:exon

position:1570371:1
position: 1570371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570474:1
position: 1570474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1571040-1571227:1:exon

position:1571040:1
position: 1571040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571227:1
position: 1571227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1574560-1574902:1:exon

position:1574560:1
position: 1574560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574902:1
position: 1574902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1580767-1581442:1:exon

position:1580767:1
position: 1580767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SPDL1
product: spindle apparatus coiled-coil protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005694512.3
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1548510..1548646,1555267..1555441,1556981..1557157,1559147..1559338,1561601..1561750,1561851..1561949,1562026..1562136,1564291..1564431,1570371..1570474,1571040..1571227,1574560..1574902,1580767..1581442)
location: region:1548510-1581442:1
so has part: feature:1548510-1548646:1:exon
so has part: feature:1555267-1555441:1:exon
so has part: feature:1556981-1557157:1:exon
so has part: feature:1559147-1559338:1:exon
so has part: feature:1561601-1561750:1:exon
so has part: feature:1561851-1561949:1:exon
so has part: feature:1562026-1562136:1:exon
so has part: feature:1564291-1564431:1:exon
so has part: feature:1570371-1570474:1:exon
so has part: feature:1571040-1571227:1:exon
so has part: feature:1574560-1574902:1:exon
so has part: feature:1580767-1581442:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1548510-1548646:1:exon

position:1548646:1
position: 1548646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1555267-1555441:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556981-1557157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1559147-1559338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1561601-1561750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1561851-1561949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1562026-1562136:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1564291-1564431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1570371-1570474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1571040-1571227:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1574560-1574902:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1580767-1581442:1:exon

SPDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SPDL1
product: spindle apparatus coiled-coil protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_018065755.1
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1548510..1548656,1555270..1555441,1556981..1557157,1559147..1559338,1561601..1561750,1561851..1561949,1562026..1562136,1564291..1564431,1570371..1570474,1571040..1571227,1574560..1576277)
location: region:1548510-1576277:1
so has part: feature:1548510-1548656:1:exon
so has part: feature:1555270-1555441:1:exon
so has part: feature:1556981-1557157:1:exon
so has part: feature:1559147-1559338:1:exon
so has part: feature:1561601-1561750:1:exon
so has part: feature:1561851-1561949:1:exon
so has part: feature:1562026-1562136:1:exon
so has part: feature:1564291-1564431:1:exon
so has part: feature:1570371-1570474:1:exon
so has part: feature:1571040-1571227:1:exon
so has part: feature:1574560-1576277:1:exon

position:1576277:1
position: 1576277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1548510-1548656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1555270-1555441:1:exon

position:1555270:1
position: 1555270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1556981-1557157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1559147-1559338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1561601-1561750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1561851-1561949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1562026-1562136:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1564291-1564431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1570371-1570474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1571040-1571227:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1574560-1576277:1:exon

SPDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SPDL1
product: spindle apparatus coiled-coil protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_018065756.1
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1548510..1548646,1555267..1555441,1556981..1557157,1559147..1559338,1561601..1561750,1561851..1561949,1562026..1562136,1564291..1564431,1570371..1570474,1571040..1571227,1574560..1576277)
location: region:1548510-1576277:1
so has part: feature:1548510-1548646:1:exon
so has part: feature:1555267-1555441:1:exon
so has part: feature:1556981-1557157:1:exon
so has part: feature:1559147-1559338:1:exon
so has part: feature:1561601-1561750:1:exon
so has part: feature:1561851-1561949:1:exon
so has part: feature:1562026-1562136:1:exon
so has part: feature:1564291-1564431:1:exon
so has part: feature:1570371-1570474:1:exon
so has part: feature:1571040-1571227:1:exon
so has part: feature:1574560-1576277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1548510-1548646:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1555267-1555441:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556981-1557157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1559147-1559338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1561601-1561750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1561851-1561949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1562026-1562136:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1564291-1564431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1570371-1570474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1571040-1571227:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1574560-1576277:1:exon

SPDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SPDL1
product: spindle apparatus coiled-coil protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018065757.1
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1548510..1548646,1555270..1555441,1556981..1557157,1559147..1559338,1561601..1561750,1561851..1561949,1562026..1562136,1564291..1564431,1570371..1570474,1571040..1571227,1574560..1576277)
location: region:1548510-1576277:1
so has part: feature:1548510-1548646:1:exon
so has part: feature:1555270-1555441:1:exon
so has part: feature:1556981-1557157:1:exon
so has part: feature:1559147-1559338:1:exon
so has part: feature:1561601-1561750:1:exon
so has part: feature:1561851-1561949:1:exon
so has part: feature:1562026-1562136:1:exon
so has part: feature:1564291-1564431:1:exon
so has part: feature:1570371-1570474:1:exon
so has part: feature:1571040-1571227:1:exon
so has part: feature:1574560-1576277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1548510-1548646:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1555270-1555441:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556981-1557157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1559147-1559338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1561601-1561750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1561851-1561949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1562026-1562136:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1564291-1564431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1570371-1570474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1571040-1571227:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1574560-1576277:1:exon

SPDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SPDL1
product: spindle apparatus coiled-coil protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_018065754.1
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1548510..1548656,1555267..1555441,1556981..1557157,1559147..1559338,1561601..1561750,1561851..1561949,1562026..1562136,1564291..1564431,1570371..1570474,1571040..1571227,1574560..1576276)
location: region:1548510-1576276:1
so has part: feature:1548510-1548656:1:exon
so has part: feature:1555267-1555441:1:exon
so has part: feature:1556981-1557157:1:exon
so has part: feature:1559147-1559338:1:exon
so has part: feature:1561601-1561750:1:exon
so has part: feature:1561851-1561949:1:exon
so has part: feature:1562026-1562136:1:exon
so has part: feature:1564291-1564431:1:exon
so has part: feature:1570371-1570474:1:exon
so has part: feature:1571040-1571227:1:exon
so has part: feature:1574560-1576276:1:exon

position:1576276:1
position: 1576276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1548510-1548656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1555267-1555441:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556981-1557157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1559147-1559338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1561601-1561750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1561851-1561949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1562026-1562136:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1564291-1564431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1570371-1570474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1571040-1571227:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1574560-1576276:1:exon

SPDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Spindly isoform X2
translation: MEADVIADLRRKLKETEEERRKAAQYGLQLVESQNELQSQLDKCRNEMMTLTESYEQEKYTLQREVELKSRMLESLSSECETIKQQQKMHLEQLEETLTRSHGQEVNELKKKLETLKAELDEARLSEKQLKHKVDHQEKLLSSKSKEMQMSERVHESVSSETLTLQIELTEMENVKTTLQEEVNELQYRQEQLELLNSSLMRQVDRLKGEKKEREKEAVSYYDALEKARVANQDLQVQLDQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNAFNREQMQRMKVQIATLLQMKGSQAEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKSLYESMEPKPSANSVALEDDTYYTDLLQIKLDNLNKESESIKGELSIQRMKALLESQRALDIERKLFLNERHLQLSRSENMKLRAKLDELKLKYEPEEKIEVPVLKKRREVLPVDITAPNGICATNDDGKEVYRLSPQKEEAQSYSNGLEDNNLQLEKTVSVNTSGVILSPYKNLPMDVQPRKEKKCVKLIGVPADSEALSERSGNTPNSPRLAAESRPQREVKQGKETASKLEKAACKKSHPIVYVSSKSTPETQCPQQ
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1555283..1555441,1556981..1557157,1559147..1559338,1561601..1561750,1561851..1561949,1562026..1562136,1564291..1564431,1570371..1570474,1571040..1571227,1574560..1574902,1580767..1580914)
location: region:1555283-1580914:1
so has part: feature:1555283-1555441:1:exon
so has part: feature:1556981-1557157:1:exon
so has part: feature:1559147-1559338:1:exon
so has part: feature:1561601-1561750:1:exon
so has part: feature:1561851-1561949:1:exon
so has part: feature:1562026-1562136:1:exon
so has part: feature:1564291-1564431:1:exon
so has part: feature:1570371-1570474:1:exon
so has part: feature:1571040-1571227:1:exon
so has part: feature:1574560-1574902:1:exon
so has part: feature:1580767-1580914:1:exon

XP_005694568.2
type: Protein
SIO_000068: ncbiprotein

position:1555283:1
position: 1555283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580914:1
position: 1580914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1555283-1555441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556981-1557157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1559147-1559338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1561601-1561750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1561851-1561949:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1562026-1562136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1564291-1564431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1570371-1570474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1571040-1571227:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1574560-1574902:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1580767-1580914:1:exon

SPDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Spindly isoform X2
translation: MEADVIADLRRKLKETEEERRKAAQYGLQLVESQNELQSQLDKCRNEMMTLTESYEQEKYTLQREVELKSRMLESLSSECETIKQQQKMHLEQLEETLTRSHGQEVNELKKKLETLKAELDEARLSEKQLKHKVDHQEKLLSSKSKEMQMSERVHESVSSETLTLQIELTEMENVKTTLQEEVNELQYRQEQLELLNSSLMRQVDRLKGEKKEREKEAVSYYDALEKARVANQDLQVQLDQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNAFNREQMQRMKVQIATLLQMKGSQAEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKSLYESMEPKPSANSVALEDDTYYTDLLQIKLDNLNKESESIKGELSIQRMKALLESQRALDIERKLFLNERHLQLSRSENMKLRAKLDELKLKYEPEEKIEVPVLKKRREVLPVDITAPNGICATNDDGKEVYRLSPQKEEAQSYSNGLEDNNLQLEKTVSVNTSGVILSPYKNLPMDVQPRKEKKCVKLIGVPADSEALSERSGNTPNSPRLAAESRPQREVKQGKETASKLEKAACKKSHPIVYVSSKSTPETQCPQQ
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1555283..1555441,1556981..1557157,1559147..1559338,1561601..1561750,1561851..1561949,1562026..1562136,1564291..1564431,1570371..1570474,1571040..1571227,1574560..1574902,1580767..1580914)
location: region:1555283-1580914:1
so has part: feature:1555283-1555441:1:exon
so has part: feature:1556981-1557157:1:exon
so has part: feature:1559147-1559338:1:exon
so has part: feature:1561601-1561750:1:exon
so has part: feature:1561851-1561949:1:exon
so has part: feature:1562026-1562136:1:exon
so has part: feature:1564291-1564431:1:exon
so has part: feature:1570371-1570474:1:exon
so has part: feature:1571040-1571227:1:exon
so has part: feature:1574560-1574902:1:exon
so has part: feature:1580767-1580914:1:exon

XP_005694569.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1555283-1555441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556981-1557157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1559147-1559338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1561601-1561750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1561851-1561949:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1562026-1562136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1564291-1564431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1570371-1570474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1571040-1571227:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1574560-1574902:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1580767-1580914:1:exon

SPDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Spindly isoform X1
translation: MEADVIADLRRKLKETEEERRKAAQYGLQLVESQNELQSQLDKCRNEMMTLTESYEQEKYTLQREVELKSRMLESLSSECETIKQQQKMHLEQLEETLTRSHGQEVNELKKKLETLKAELDEARLSEKQLKHKVDHQEKLLSSKSKEMQMSERVHESVSSETLTLQIELTEMENVKTTLQEEVNELQYRQEQLELLNSSLMRQVDRLKGEKKEREKEAVSYYDALEKARVANQDLQVQLDQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNAFNREQMQRMKVQIATLLQMKGSQAEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKSLYESMEPKPSANSVALEDDTYYTDLLQIKLDNLNKESESIKGELSIQRMKALLESQRALDIERKLFLNERHLQLSRSENMKLRAKLDELKLKYEPEEKIEVPVLKKRREVLPVDITAPNGICATNDDGKEVYRLSPQKEEAQSYSNGLEDNNLQLEKTVSVNTSGVILSPYKNLPMDVQPRKEKKCVKLIGVPADSEALSERSGNTPNSPRSVSFLQGREQPSPSRLYRCMNCAICFLIYFLSIVCSIIPQFHLRTFQFSKTLRKT
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1555283..1555441,1556981..1557157,1559147..1559338,1561601..1561750,1561851..1561949,1562026..1562136,1564291..1564431,1570371..1570474,1571040..1571227,1574560..1575071)
location: region:1555283-1575071:1
so has part: feature:1555283-1555441:1:exon
so has part: feature:1556981-1557157:1:exon
so has part: feature:1559147-1559338:1:exon
so has part: feature:1561601-1561750:1:exon
so has part: feature:1561851-1561949:1:exon
so has part: feature:1562026-1562136:1:exon
so has part: feature:1564291-1564431:1:exon
so has part: feature:1570371-1570474:1:exon
so has part: feature:1571040-1571227:1:exon
so has part: feature:1574560-1575071:1:exon

XP_017921243.1
type: Protein
SIO_000068: ncbiprotein

position:1575071:1
position: 1575071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1555283-1555441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556981-1557157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1559147-1559338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1561601-1561750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1561851-1561949:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1562026-1562136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1564291-1564431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1570371-1570474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1571040-1571227:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1574560-1575071:1:exon

SPDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Spindly isoform X1
translation: MEADVIADLRRKLKETEEERRKAAQYGLQLVESQNELQSQLDKCRNEMMTLTESYEQEKYTLQREVELKSRMLESLSSECETIKQQQKMHLEQLEETLTRSHGQEVNELKKKLETLKAELDEARLSEKQLKHKVDHQEKLLSSKSKEMQMSERVHESVSSETLTLQIELTEMENVKTTLQEEVNELQYRQEQLELLNSSLMRQVDRLKGEKKEREKEAVSYYDALEKARVANQDLQVQLDQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNAFNREQMQRMKVQIATLLQMKGSQAEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKSLYESMEPKPSANSVALEDDTYYTDLLQIKLDNLNKESESIKGELSIQRMKALLESQRALDIERKLFLNERHLQLSRSENMKLRAKLDELKLKYEPEEKIEVPVLKKRREVLPVDITAPNGICATNDDGKEVYRLSPQKEEAQSYSNGLEDNNLQLEKTVSVNTSGVILSPYKNLPMDVQPRKEKKCVKLIGVPADSEALSERSGNTPNSPRSVSFLQGREQPSPSRLYRCMNCAICFLIYFLSIVCSIIPQFHLRTFQFSKTLRKT
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1555283..1555441,1556981..1557157,1559147..1559338,1561601..1561750,1561851..1561949,1562026..1562136,1564291..1564431,1570371..1570474,1571040..1571227,1574560..1575071)
location: region:1555283-1575071:1
so has part: feature:1555283-1555441:1:exon
so has part: feature:1556981-1557157:1:exon
so has part: feature:1559147-1559338:1:exon
so has part: feature:1561601-1561750:1:exon
so has part: feature:1561851-1561949:1:exon
so has part: feature:1562026-1562136:1:exon
so has part: feature:1564291-1564431:1:exon
so has part: feature:1570371-1570474:1:exon
so has part: feature:1571040-1571227:1:exon
so has part: feature:1574560-1575071:1:exon

XP_017921244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1555283-1555441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556981-1557157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1559147-1559338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1561601-1561750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1561851-1561949:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1562026-1562136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1564291-1564431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1570371-1570474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1571040-1571227:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1574560-1575071:1:exon

SPDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Spindly isoform X1
translation: MEADVIADLRRKLKETEEERRKAAQYGLQLVESQNELQSQLDKCRNEMMTLTESYEQEKYTLQREVELKSRMLESLSSECETIKQQQKMHLEQLEETLTRSHGQEVNELKKKLETLKAELDEARLSEKQLKHKVDHQEKLLSSKSKEMQMSERVHESVSSETLTLQIELTEMENVKTTLQEEVNELQYRQEQLELLNSSLMRQVDRLKGEKKEREKEAVSYYDALEKARVANQDLQVQLDQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNAFNREQMQRMKVQIATLLQMKGSQAEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKSLYESMEPKPSANSVALEDDTYYTDLLQIKLDNLNKESESIKGELSIQRMKALLESQRALDIERKLFLNERHLQLSRSENMKLRAKLDELKLKYEPEEKIEVPVLKKRREVLPVDITAPNGICATNDDGKEVYRLSPQKEEAQSYSNGLEDNNLQLEKTVSVNTSGVILSPYKNLPMDVQPRKEKKCVKLIGVPADSEALSERSGNTPNSPRSVSFLQGREQPSPSRLYRCMNCAICFLIYFLSIVCSIIPQFHLRTFQFSKTLRKT
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1555283..1555441,1556981..1557157,1559147..1559338,1561601..1561750,1561851..1561949,1562026..1562136,1564291..1564431,1570371..1570474,1571040..1571227,1574560..1575071)
location: region:1555283-1575071:1
so has part: feature:1555283-1555441:1:exon
so has part: feature:1556981-1557157:1:exon
so has part: feature:1559147-1559338:1:exon
so has part: feature:1561601-1561750:1:exon
so has part: feature:1561851-1561949:1:exon
so has part: feature:1562026-1562136:1:exon
so has part: feature:1564291-1564431:1:exon
so has part: feature:1570371-1570474:1:exon
so has part: feature:1571040-1571227:1:exon
so has part: feature:1574560-1575071:1:exon

XP_017921245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1555283-1555441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556981-1557157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1559147-1559338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1561601-1561750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1561851-1561949:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1562026-1562136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1564291-1564431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1570371-1570474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1571040-1571227:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1574560-1575071:1:exon

SPDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SPDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Spindly isoform X1
translation: MEADVIADLRRKLKETEEERRKAAQYGLQLVESQNELQSQLDKCRNEMMTLTESYEQEKYTLQREVELKSRMLESLSSECETIKQQQKMHLEQLEETLTRSHGQEVNELKKKLETLKAELDEARLSEKQLKHKVDHQEKLLSSKSKEMQMSERVHESVSSETLTLQIELTEMENVKTTLQEEVNELQYRQEQLELLNSSLMRQVDRLKGEKKEREKEAVSYYDALEKARVANQDLQVQLDQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNAFNREQMQRMKVQIATLLQMKGSQAEFEQQERLLAMLEQKNGEIKHLLGEIRNLEKFKSLYESMEPKPSANSVALEDDTYYTDLLQIKLDNLNKESESIKGELSIQRMKALLESQRALDIERKLFLNERHLQLSRSENMKLRAKLDELKLKYEPEEKIEVPVLKKRREVLPVDITAPNGICATNDDGKEVYRLSPQKEEAQSYSNGLEDNNLQLEKTVSVNTSGVILSPYKNLPMDVQPRKEKKCVKLIGVPADSEALSERSGNTPNSPRSVSFLQGREQPSPSRLYRCMNCAICFLIYFLSIVCSIIPQFHLRTFQFSKTLRKT
SIO_010081: SPDL1
subclass of: SO_0000673
so part of: SPDL1
location: join(1555283..1555441,1556981..1557157,1559147..1559338,1561601..1561750,1561851..1561949,1562026..1562136,1564291..1564431,1570371..1570474,1571040..1571227,1574560..1575071)
location: region:1555283-1575071:1
so has part: feature:1555283-1555441:1:exon
so has part: feature:1556981-1557157:1:exon
so has part: feature:1559147-1559338:1:exon
so has part: feature:1561601-1561750:1:exon
so has part: feature:1561851-1561949:1:exon
so has part: feature:1562026-1562136:1:exon
so has part: feature:1564291-1564431:1:exon
so has part: feature:1570371-1570474:1:exon
so has part: feature:1571040-1571227:1:exon
so has part: feature:1574560-1575071:1:exon

XP_017921246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1555283-1555441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556981-1557157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1559147-1559338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1561601-1561750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1561851-1561949:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1562026-1562136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1564291-1564431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1570371-1570474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1571040-1571227:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1574560-1575071:1:exon

DOCK2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: DOCK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1615351..2078325
location: region:1615351-2078325:1
so has part: feature:1615351-2078325:1:exon
subclass of: SO_0000010

102177564
type: Gene
SIO_000068: ncbigene

position:1615351:1
position: 1615351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2078325:1
position: 2078325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1615351-2078325:1:exon

DOCK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: DOCK2
product: dedicator of cytokinesis 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 18 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018065716.1
SIO_010081: DOCK2
subclass of: SO_0000673
so part of: DOCK2
location: join(1615351..1615478,1634575..1634658,1646233..1646273,1647363..1647418,1647864..1647960,1650708..1650856,1656605..1656740,1658723..1658877,1666374..1666455,1676559..1676694,1678986..1679061,1680014..1680090,1680684..1680809,1682011..1682135,1690157..1690255,1691963..1692035,1692155..1692258,1694229..1694412,1694533..1694630,1697240..1697329,1698389..1698489,1699290..1699424,1728317..1728425,1740341..1740411,1742460..1742566,1788077..1788225,1820324..1820419,1964720..1964818,1967739..1967833,1984628..1984706,1997190..1997290,1997389..1997447,2008759..2008907,2018814..2018899,2026246..2026402,2028765..2028805,2032835..2032925,2033537..2033656,2038216..2038305,2040300..2040404,2042295..2042436,2048179..2048260,2049608..2049692,2050404..2050490,2055726..2055902,2057855..2057938,2067696..2067833,2072233..2072360,2073974..2074145,2075154..2075274,2076775..2076917,2077757..2078325)
location: region:1615351-2078325:1
so has part: feature:1615351-1615478:1:exon
so has part: feature:1634575-1634658:1:exon
so has part: feature:1646233-1646273:1:exon
so has part: feature:1647363-1647418:1:exon
so has part: feature:1647864-1647960:1:exon
so has part: feature:1650708-1650856:1:exon
so has part: feature:1656605-1656740:1:exon
so has part: feature:1658723-1658877:1:exon
so has part: feature:1666374-1666455:1:exon
so has part: feature:1676559-1676694:1:exon
so has part: feature:1678986-1679061:1:exon
so has part: feature:1680014-1680090:1:exon
so has part: feature:1680684-1680809:1:exon
so has part: feature:1682011-1682135:1:exon
so has part: feature:1690157-1690255:1:exon
so has part: feature:1691963-1692035:1:exon
so has part: feature:1692155-1692258:1:exon
so has part: feature:1694229-1694412:1:exon
so has part: feature:1694533-1694630:1:exon
so has part: feature:1697240-1697329:1:exon
so has part: feature:1698389-1698489:1:exon
so has part: feature:1699290-1699424:1:exon
so has part: feature:1728317-1728425:1:exon
so has part: feature:1740341-1740411:1:exon
so has part: feature:1742460-1742566:1:exon
so has part: feature:1788077-1788225:1:exon
so has part: feature:1820324-1820419:1:exon
so has part: feature:1964720-1964818:1:exon
so has part: feature:1967739-1967833:1:exon
so has part: feature:1984628-1984706:1:exon
so has part: feature:1997190-1997290:1:exon
so has part: feature:1997389-1997447:1:exon
so has part: feature:2008759-2008907:1:exon
so has part: feature:2018814-2018899:1:exon
so has part: feature:2026246-2026402:1:exon
so has part: feature:2028765-2028805:1:exon
so has part: feature:2032835-2032925:1:exon
so has part: feature:2033537-2033656:1:exon
so has part: feature:2038216-2038305:1:exon
so has part: feature:2040300-2040404:1:exon
so has part: feature:2042295-2042436:1:exon
so has part: feature:2048179-2048260:1:exon
so has part: feature:2049608-2049692:1:exon
so has part: feature:2050404-2050490:1:exon
so has part: feature:2055726-2055902:1:exon
so has part: feature:2057855-2057938:1:exon
so has part: feature:2067696-2067833:1:exon
so has part: feature:2072233-2072360:1:exon
so has part: feature:2073974-2074145:1:exon
so has part: feature:2075154-2075274:1:exon
so has part: feature:2076775-2076917:1:exon
so has part: feature:2077757-2078325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1615351-1615478:1:exon

position:1615478:1
position: 1615478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1634575-1634658:1:exon

position:1634575:1
position: 1634575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1634658:1
position: 1634658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1646233-1646273:1:exon

position:1646233:1
position: 1646233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1646273:1
position: 1646273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1647363-1647418:1:exon

position:1647363:1
position: 1647363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647418:1
position: 1647418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1647864-1647960:1:exon

position:1647864:1
position: 1647864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647960:1
position: 1647960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1650708-1650856:1:exon

position:1650708:1
position: 1650708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1650856:1
position: 1650856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1656605-1656740:1:exon

position:1656605:1
position: 1656605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1656740:1
position: 1656740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1658723-1658877:1:exon

position:1658723:1
position: 1658723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1658877:1
position: 1658877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1666374-1666455:1:exon

position:1666374:1
position: 1666374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666455:1
position: 1666455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1676559-1676694:1:exon

position:1676559:1
position: 1676559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1676694:1
position: 1676694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1678986-1679061:1:exon

position:1678986:1
position: 1678986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1679061:1
position: 1679061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1680014-1680090:1:exon

position:1680014:1
position: 1680014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1680090:1
position: 1680090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1680684-1680809:1:exon

position:1680684:1
position: 1680684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1680809:1
position: 1680809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1682011-1682135:1:exon

position:1682011:1
position: 1682011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682135:1
position: 1682135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1690157-1690255:1:exon

position:1690157:1
position: 1690157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690255:1
position: 1690255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1691963-1692035:1:exon

position:1691963:1
position: 1691963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692035:1
position: 1692035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1692155-1692258:1:exon

position:1692155:1
position: 1692155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692258:1
position: 1692258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1694229-1694412:1:exon

position:1694229:1
position: 1694229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694412:1
position: 1694412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1694533-1694630:1:exon

position:1694533:1
position: 1694533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694630:1
position: 1694630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1697240-1697329:1:exon

position:1697240:1
position: 1697240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1697329:1
position: 1697329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1698389-1698489:1:exon

position:1698389:1
position: 1698389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698489:1
position: 1698489
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:1699290-1699424:1:exon

position:1699290:1
position: 1699290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1699424:1
position: 1699424
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:1728317-1728425:1:exon

position:1728317:1
position: 1728317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1728425:1
position: 1728425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1740341-1740411:1:exon

position:1740341:1
position: 1740341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1740411:1
position: 1740411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1742460-1742566:1:exon

position:1742460:1
position: 1742460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1742566:1
position: 1742566
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:1788077-1788225:1:exon

position:1788077:1
position: 1788077
reference: sequence
type: ForwardStrandPosition
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position:1788225:1
position: 1788225
reference: sequence
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urn:…
SIO_000300: 27
SIO_000628: feature:1820324-1820419:1:exon

position:1820324:1
position: 1820324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1820419:1
position: 1820419
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 28
SIO_000628: feature:1964720-1964818:1:exon

position:1964720:1
position: 1964720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1964818:1
position: 1964818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1967739-1967833:1:exon

position:1967739:1
position: 1967739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1967833:1
position: 1967833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1984628-1984706:1:exon

position:1984628:1
position: 1984628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1984706:1
position: 1984706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1997190-1997290:1:exon

position:1997190:1
position: 1997190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1997290:1
position: 1997290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1997389-1997447:1:exon

position:1997389:1
position: 1997389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1997447:1
position: 1997447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2008759-2008907:1:exon

position:2008759:1
position: 2008759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2008907:1
position: 2008907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2018814-2018899:1:exon

position:2018814:1
position: 2018814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2018899:1
position: 2018899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2026246-2026402:1:exon

position:2026246:1
position: 2026246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2026402:1
position: 2026402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2028765-2028805:1:exon

position:2028765:1
position: 2028765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2028805:1
position: 2028805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2032835-2032925:1:exon

position:2032835:1
position: 2032835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2032925:1
position: 2032925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2033537-2033656:1:exon

position:2033537:1
position: 2033537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2033656:1
position: 2033656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2038216-2038305:1:exon

position:2038216:1
position: 2038216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2038305:1
position: 2038305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:2040300-2040404:1:exon

position:2040300:1
position: 2040300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2040404:1
position: 2040404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:2042295-2042436:1:exon

position:2042295:1
position: 2042295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2042436:1
position: 2042436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:2048179-2048260:1:exon

position:2048179:1
position: 2048179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2048260:1
position: 2048260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:2049608-2049692:1:exon

position:2049608:1
position: 2049608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2049692:1
position: 2049692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:2050404-2050490:1:exon

position:2050404:1
position: 2050404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2050490:1
position: 2050490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:2055726-2055902:1:exon

position:2055726:1
position: 2055726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2055902:1
position: 2055902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:2057855-2057938:1:exon

position:2057855:1
position: 2057855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2057938:1
position: 2057938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:2067696-2067833:1:exon

position:2067696:1
position: 2067696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067833:1
position: 2067833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:2072233-2072360:1:exon

position:2072233:1
position: 2072233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2072360:1
position: 2072360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:2073974-2074145:1:exon

position:2073974:1
position: 2073974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2074145:1
position: 2074145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:2075154-2075274:1:exon

position:2075154:1
position: 2075154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2075274:1
position: 2075274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:2076775-2076917:1:exon

position:2076775:1
position: 2076775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2076917:1
position: 2076917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:2077757-2078325:1:exon

position:2077757:1
position: 2077757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DOCK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: DOCK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dedicator of cytokinesis protein 2
translation: MAPWRKTDKERHGVAIYNFQGSGTPQLSLQIGDVVRIQETCGDWYRGYLVKHKMLQGIFPKSFIYIKEVTVEKKRNIENIIPAEIPLAQEVTTTLWEWGSIWKQLYVASKKERFLQVQSMMYDLMEWRSQLLSGTLPKDELKELKQKVTSKIDYGNKILELDLIVRDEDGNILDPDNTSIISLFHAHEEATDKITERIKEEMSKDQPDYGMYSRISSSPTHSLYVFVRNFVCRIGEDAELFMSLYDPNKQMVISENYLVRWGSRGFPKEIEMLNNLKVVFTDLGNKDLNRDKIYLICQIVRVGKMDLKDTNTKKCTQGLRRPFGVAVMDITDIIKGKAESDEEKQHFIPFHPVTAENDFLHSLLGKVTASKGDSGGQGLWVTMKMLVGDIIQIRKDYPHLVDRTTVVARKLGFPEIIMPGDVRNDIYITLLQGDFDKYSKTTQRNVEVIMCVCAEDGKTLPNAICVGAGDKPMNEYRSVVYYQVKQPRWMETVKVAVPIEDMQRIHLRFMFRHRSSLESKDKGEKNFAMSYVKLMKEDGTTLHDGCHDLVVLKGDSKKMEDASSYLTLPSYRHHVENKGATLSRSSSSAGGLSVSSRDVFCIATLVCSTKLTQNVGLLGLLKWRMKPQLLQENLEKLKIVDGEEVVKFLQDTLDALFNIMMEHSQSDEYDILVFDALIYIIGLIADRKFQHFNTVLEAYIQQHFSATLAYKKLMTVLKTYLDTSSRGEQCEPILRTLKALEYVFKFIVRSRTLFSQLYEGKEQMEFEESMRRLFESINNLMKSQYKTTILLQVAALKYIPSVLHDVETVFDAKLLSQLLYEFYTCIPPVKLQKQKVQSMNEIVQSNLFKKQECRDILLPVITKELKELLEQKDDLQHQVQEKKYCVELLNSILEVLSCQDAAFTYHHIQEIMVQLLRTVNRTVITMGRDHVLISHFVACMTAILNQMGDQHYSFYIETFQTSSELVDFLMETFIMFKDLIGKNVYPADWVAMSMVQNRVFLRAINKFAETMNQKFLENTNFEFQLWNNYFHLAVAFITQDSLQLEQFSHAKYNKILNKYGDMRRLIGFSIRDMWYKLGQNKICFIPGMVGPILEMTLIPEAELRKATIPIFFDMMLCEYQRSGDFKKFENEIILKLDHEVEGGRGDEQYMQLLESILMECAAEHPTICKSVENFVNLVKGLLEKLLDYRGVMTDESKDNRMSCTVNLLNFYKDNNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQYPQTHRQLKETLYDIIIGYFDKGKMWEEAISLCKELAEQCEMEIFDYQLLSQNLIQQAKFYENIMKILRPKPDYFAVGYYGQGFPSFLRNKVFIYRGKEYERREDFQMQLMSQFPNAEKMNTTSAPGDDVKNAPGQYIQCFTVQPVLDEHPRFKNKPVPDQIINFYKSNHVQKFHYSRPVRRGTVDPENEFASMWIERTSFVTAYKLPGILRWFEVVHMSQTTISPLENAIETMSTANEKILMMINQYQNDETLPINPLSMLLNGIVDPAVMGGFAKYEKAFFTEEYTREHPEDQDKLTRLKDLIAWQIPFLGAGIKIHERRVSENLRPFHDRMEECFKNLKVKVEKEYGVREMPDFEDRRVGRPRSMLRSYRQMSIISMASLSSDCSTPSKAASESFDLEIAPPKTPKVEQEEPISPGSTLPEVKLRRSKKRAKRSSVVFADEKPPAESDLKRLSRKHEFMSDTNLSEHVAVAPRASILSQMSFASQSMPTIPALTLSVVGVPGTDEASASPRLSQTFLPLSDGDKKTLKRKKVNQFFKTMLAGKPTEEGKPTSDPMSTDL
SIO_010081: DOCK2
subclass of: SO_0000673
so part of: DOCK2
location: join(1615436..1615478,1634575..1634658,1646233..1646273,1647363..1647418,1647864..1647960,1650708..1650856,1656605..1656740,1658723..1658877,1666374..1666455,1676559..1676694,1678986..1679061,1680014..1680090,1680684..1680809,1682011..1682135,1690157..1690255,1691963..1692035,1692155..1692258,1694229..1694412,1694533..1694630,1697240..1697329,1698389..1698489,1699290..1699424,1728317..1728425,1740341..1740411,1742460..1742566,1788077..1788225,1820324..1820419,1964720..1964818,1967739..1967833,1984628..1984706,1997190..1997290,1997389..1997447,2008759..2008907,2018814..2018899,2026246..2026402,2028765..2028805,2032835..2032925,2033537..2033656,2038216..2038305,2040300..2040404,2042295..2042436,2048179..2048260,2049608..2049692,2050404..2050490,2055726..2055902,2057855..2057938,2067696..2067833,2072233..2072360,2073974..2074145,2075154..2075274,2076775..2076917,2077757..2077819)
location: region:1615436-2077819:1
so has part: feature:1615436-1615478:1:exon
so has part: feature:1634575-1634658:1:exon
so has part: feature:1646233-1646273:1:exon
so has part: feature:1647363-1647418:1:exon
so has part: feature:1647864-1647960:1:exon
so has part: feature:1650708-1650856:1:exon
so has part: feature:1656605-1656740:1:exon
so has part: feature:1658723-1658877:1:exon
so has part: feature:1666374-1666455:1:exon
so has part: feature:1676559-1676694:1:exon
so has part: feature:1678986-1679061:1:exon
so has part: feature:1680014-1680090:1:exon
so has part: feature:1680684-1680809:1:exon
so has part: feature:1682011-1682135:1:exon
so has part: feature:1690157-1690255:1:exon
so has part: feature:1691963-1692035:1:exon
so has part: feature:1692155-1692258:1:exon
so has part: feature:1694229-1694412:1:exon
so has part: feature:1694533-1694630:1:exon
so has part: feature:1697240-1697329:1:exon
so has part: feature:1698389-1698489:1:exon
so has part: feature:1699290-1699424:1:exon
so has part: feature:1728317-1728425:1:exon
so has part: feature:1740341-1740411:1:exon
so has part: feature:1742460-1742566:1:exon
so has part: feature:1788077-1788225:1:exon
so has part: feature:1820324-1820419:1:exon
so has part: feature:1964720-1964818:1:exon
so has part: feature:1967739-1967833:1:exon
so has part: feature:1984628-1984706:1:exon
so has part: feature:1997190-1997290:1:exon
so has part: feature:1997389-1997447:1:exon
so has part: feature:2008759-2008907:1:exon
so has part: feature:2018814-2018899:1:exon
so has part: feature:2026246-2026402:1:exon
so has part: feature:2028765-2028805:1:exon
so has part: feature:2032835-2032925:1:exon
so has part: feature:2033537-2033656:1:exon
so has part: feature:2038216-2038305:1:exon
so has part: feature:2040300-2040404:1:exon
so has part: feature:2042295-2042436:1:exon
so has part: feature:2048179-2048260:1:exon
so has part: feature:2049608-2049692:1:exon
so has part: feature:2050404-2050490:1:exon
so has part: feature:2055726-2055902:1:exon
so has part: feature:2057855-2057938:1:exon
so has part: feature:2067696-2067833:1:exon
so has part: feature:2072233-2072360:1:exon
so has part: feature:2073974-2074145:1:exon
so has part: feature:2075154-2075274:1:exon
so has part: feature:2076775-2076917:1:exon
so has part: feature:2077757-2077819:1:exon

XP_017921205.1
type: Protein
SIO_000068: ncbiprotein

position:1615436:1
position: 1615436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2077819:1
position: 2077819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1615436-1615478:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1634575-1634658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1646233-1646273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1647363-1647418:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647864-1647960:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1650708-1650856:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1656605-1656740:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1658723-1658877:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1666374-1666455:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1676559-1676694:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1678986-1679061:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1680014-1680090:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1680684-1680809:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1682011-1682135:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1690157-1690255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1691963-1692035:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1692155-1692258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1694229-1694412:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1694533-1694630:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1697240-1697329:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1698389-1698489:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1699290-1699424:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1728317-1728425:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1740341-1740411:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1742460-1742566:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1788077-1788225:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1820324-1820419:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1964720-1964818:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1967739-1967833:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1984628-1984706:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1997190-1997290:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1997389-1997447:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2008759-2008907:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2018814-2018899:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2026246-2026402:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2028765-2028805:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2032835-2032925:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2033537-2033656:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2038216-2038305:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2040300-2040404:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2042295-2042436:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2048179-2048260:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2049608-2049692:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2050404-2050490:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2055726-2055902:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2057855-2057938:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2067696-2067833:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2072233-2072360:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2073974-2074145:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2075154-2075274:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2076775-2076917:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2077757-2077819:1:exon

FAM196B
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: FAM196B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1838756..1863465)
location: region:1838756-1863465:-1
so has part: feature:1838756-1863465:-1:exon
subclass of: SO_0000010

102184281
type: Gene
SIO_000068: ncbigene

position:1838756:-1
position: 1838756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1863465:-1
position: 1863465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1838756-1863465:-1:exon

FAM196B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FAM196B
product: family with sequence similarity 196 member B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005694515.3
SIO_010081: FAM196B
subclass of: SO_0000673
so part of: FAM196B
location: complement(join(1838756..1841739,1860752..1860826,1861957..1863465))
location: region:1838756-1863465:-1
so has part: feature:1861957-1863465:-1:exon
so has part: feature:1860752-1860826:-1:exon
so has part: feature:1838756-1841739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1861957-1863465:-1:exon

position:1861957:-1
position: 1861957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1860752-1860826:-1:exon

position:1860752:-1
position: 1860752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1860826:-1
position: 1860826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1838756-1841739:-1:exon

position:1841739:-1
position: 1841739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM196B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FAM196B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM196B
translation: MAQQSMKVRPVLLKRNSLESVELVKQPHHRRSKSQQVRFKEDGTSKTPPGLAEVDVQTSEDPAVMGKTQASRHHHLPTYSLSFPRSQKAGGFRNIAIQTSPSLRKHFPVFKRKRLTASKSLVEMPTASQSAIQVNGNLSEQDIVSSELAYLRLAQHLEDGPRRVKVSHPFLPRMSKVQSNGPVSLCFEAGTWRALEKVTAAIQVPDDIYHSPTWAGRESTLSPDRSAEISNSIPSLVDRRPGDGRRQLPPDSESIPSCLNAPSRASHTPGTGNLQPELLLPKDNSDDKDLGPLSSRSKERCAPSHARTHSSPPPGSQSQPAQPGGASDCSSLSNNYQDLQSLETNSESGSAPVCQEQTAKNPIRSDIPELQNCPGSGHLPSSLLNQETKQQRVTGGINPIHLAQGELCDLQGRLQSVEESLHSNQEKIKVLLNVIQDLEKARALTEGRNFYRTGQDLNNCSTCQNTACIIYSVEYDFRQQEGRFHEVLQGLEEAELAEEASPPPKSPAEPPVPEKQDLRRKTKKVKKKCFWWI
SIO_010081: FAM196B
subclass of: SO_0000673
so part of: FAM196B
location: complement(join(1841553..1841739,1860752..1860826,1861957..1863296))
location: region:1841553-1863296:-1
so has part: feature:1861957-1863296:-1:exon
so has part: feature:1860752-1860826:-1:exon
so has part: feature:1841553-1841739:-1:exon

XP_005694572.1
type: Protein
SIO_000068: ncbiprotein

position:1841553:-1
position: 1841553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1863296:-1
position: 1863296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1861957-1863296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1860752-1860826:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1841553-1841739:-1:exon

FOXI1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: FOXI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2087691..2091628
location: region:2087691-2091628:1
so has part: feature:2087691-2091628:1:exon
subclass of: SO_0000010

102177838
type: Gene
SIO_000068: ncbigene

position:2087691:1
position: 2087691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2091628:1
position: 2091628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2087691-2091628:1:exon

FOXI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FOXI1
product: forkhead box I1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018065806.1
SIO_010081: FOXI1
subclass of: SO_0000673
so part of: FOXI1
location: join(2087691..2088397,2090010..2091628)
location: region:2087691-2091628:1
so has part: feature:2087691-2088397:1:exon
so has part: feature:2090010-2091628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2087691-2088397:1:exon

position:2088397:1
position: 2088397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2090010-2091628:1:exon

position:2090010:1
position: 2090010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FOXI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FOXI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein I1
translation: MSSFDLPAPSPPRCSPQFPSLGQEPPEMNLYYENFFHPQGAPSPQRPPSFEGGGEYGAAPNPYLWLNGPAVTPPPYLPGGSPFLPQAYGGVQRQLLPAGVPALGAGDLGWLPLPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDVSSSTGSMASEKTEAGLLGGSPETAEAQDILDGAAPGPTGSPEKRSTPPPPGTPCLSSFLSTMSAYVSGPSPMSRPVATTPGLSLEPADKAGQNSLSFSSYTPLTNISSPAGGGEWASPMPSNALGYGGSVLNQFSTPFYGSVSTNSVLYPREGTEV
SIO_010081: FOXI1
subclass of: SO_0000673
so part of: FOXI1
location: join(2087821..2088397,2090010..2090572)
location: region:2087821-2090572:1
so has part: feature:2087821-2088397:1:exon
so has part: feature:2090010-2090572:1:exon

XP_017921295.1
type: Protein
SIO_000068: ncbiprotein

position:2087821:1
position: 2087821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2090572:1
position: 2090572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2087821-2088397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2090010-2090572:1:exon

C20H5orf58
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: C20H5orf58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2199292..2202061
location: region:2199292-2202061:1
so has part: feature:2199292-2202061:1:exon
subclass of: SO_0000010

106503299
type: Gene
SIO_000068: ncbigene

position:2199292:1
position: 2199292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2202061:1
position: 2202061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2199292-2202061:1:exon

C20H5orf58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: C20H5orf58
product: chromosome 20 C5orf58 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013972665.2
SIO_010081: C20H5orf58
subclass of: SO_0000673
so part of: C20H5orf58
location: join(2199292..2199457,2200663..2200860,2202046..2202061)
location: region:2199292-2202061:1
so has part: feature:2199292-2199457:1:exon
so has part: feature:2200663-2200860:1:exon
so has part: feature:2202046-2202061:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2199292-2199457:1:exon

position:2199457:1
position: 2199457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2200663-2200860:1:exon

position:2200663:1
position: 2200663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2200860:1
position: 2200860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2202046-2202061:1:exon

position:2202046:1
position: 2202046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C20H5orf58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: C20H5orf58
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: putative uncharacterized protein C5orf58 homolog
translation: MIKNNVTDRKLNVEAIIKNINTISLELKKLNDLHHMYIXTAVTTKETRTATTSLDQSEHTAETGERITSSAIKLCPRKKREVAVSWAPSRECLLCFFIFQPH
SIO_010081: C20H5orf58
subclass of: SO_0000673
so part of: C20H5orf58
location: join(2199364..2199457,2200663..2200860,2202046..2202061)
location: region:2199364-2202061:1
so has part: feature:2199364-2199457:1:exon
so has part: feature:2200663-2200860:1:exon
so has part: feature:2202046-2202061:1:exon

XP_013828119.1
type: Protein
SIO_000068: ncbiprotein

position:2199364:1
position: 2199364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2199364-2199457:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2200663-2200860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2202046-2202061:1:exon

LCP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2207951..2256091)
location: region:2207951-2256091:-1
so has part: feature:2207951-2256091:-1:exon
subclass of: SO_0000010

102184554
type: Gene
SIO_000068: ncbigene

position:2207951:-1
position: 2207951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2256091:-1
position: 2256091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2207951-2256091:-1:exon

LCP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LCP2
product: lymphocyte cytosolic protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_013972703.2
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(2207951..2209247,2211398..2211553,2213741..2213818,2214416..2214507,2217686..2217735,2219359..2219488,2220182..2220194,2222497..2222527,2223853..2223960,2224053..2224072,2224183..2224208,2227810..2227893,2227987..2228056,2230374..2230471,2232461..2232659,2235939..2235976,2236569..2236600,2236995..2237060,2246171..2246217,2251197..2251259,2255766..2256091))
location: region:2207951-2256091:-1
so has part: feature:2255766-2256091:-1:exon
so has part: feature:2251197-2251259:-1:exon
so has part: feature:2246171-2246217:-1:exon
so has part: feature:2236995-2237060:-1:exon
so has part: feature:2236569-2236600:-1:exon
so has part: feature:2235939-2235976:-1:exon
so has part: feature:2232461-2232659:-1:exon
so has part: feature:2230374-2230471:-1:exon
so has part: feature:2227987-2228056:-1:exon
so has part: feature:2227810-2227893:-1:exon
so has part: feature:2224183-2224208:-1:exon
so has part: feature:2224053-2224072:-1:exon
so has part: feature:2223853-2223960:-1:exon
so has part: feature:2222497-2222527:-1:exon
so has part: feature:2220182-2220194:-1:exon
so has part: feature:2219359-2219488:-1:exon
so has part: feature:2217686-2217735:-1:exon
so has part: feature:2214416-2214507:-1:exon
so has part: feature:2213741-2213818:-1:exon
so has part: feature:2211398-2211553:-1:exon
so has part: feature:2207951-2209247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2255766-2256091:-1:exon

position:2255766:-1
position: 2255766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2251197-2251259:-1:exon

position:2251197:-1
position: 2251197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2251259:-1
position: 2251259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2246171-2246217:-1:exon

position:2246171:-1
position: 2246171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2246217:-1
position: 2246217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2236995-2237060:-1:exon

position:2236995:-1
position: 2236995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2237060:-1
position: 2237060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2236569-2236600:-1:exon

position:2236569:-1
position: 2236569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2236600:-1
position: 2236600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2235939-2235976:-1:exon

position:2235939:-1
position: 2235939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2235976:-1
position: 2235976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2232461-2232659:-1:exon

position:2232461:-1
position: 2232461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2232659:-1
position: 2232659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2230374-2230471:-1:exon

position:2230374:-1
position: 2230374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2230471:-1
position: 2230471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2227987-2228056:-1:exon

position:2227987:-1
position: 2227987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2228056:-1
position: 2228056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2227810-2227893:-1:exon

position:2227810:-1
position: 2227810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2227893:-1
position: 2227893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2224183-2224208:-1:exon

position:2224183:-1
position: 2224183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2224208:-1
position: 2224208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2224053-2224072:-1:exon

position:2224053:-1
position: 2224053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2224072:-1
position: 2224072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2223853-2223960:-1:exon

position:2223853:-1
position: 2223853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2223960:-1
position: 2223960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2222497-2222527:-1:exon

position:2222497:-1
position: 2222497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2222527:-1
position: 2222527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2220182-2220194:-1:exon

position:2220182:-1
position: 2220182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2220194:-1
position: 2220194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2219359-2219488:-1:exon

position:2219359:-1
position: 2219359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2219488:-1
position: 2219488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2217686-2217735:-1:exon

position:2217686:-1
position: 2217686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2217735:-1
position: 2217735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2214416-2214507:-1:exon

position:2214416:-1
position: 2214416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2214507:-1
position: 2214507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2213741-2213818:-1:exon

position:2213741:-1
position: 2213741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2213818:-1
position: 2213818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2211398-2211553:-1:exon

position:2211398:-1
position: 2211398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2211553:-1
position: 2211553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2207951-2209247:-1:exon

position:2209247:-1
position: 2209247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LCP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LCP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte cytosolic protein 2
translation: MAFKNVPFRSEVLNWDPDALADYFKKLNYKDCEKVVKKHHIDGPRFLSLAENDIQKFPKLRVPILSKLSQEINKNEERRSIFTRKPQVQRFPEETESHEEDNGGWSSFEEDDYESPTDDADVEDDGDYESPNEEEEAPAEDDADYEPPPSNDEEALQNSILPAKPLSNPNSMYIDRPPTGKVQQPPVPPQRPMPTLPPLPTGGRIHQQPLPPPQPNHEEPSRSRTHKTAKLPAPSIDRSTKPALDRSLVPFDREPFTLGKKPAISDKPSVLGGRPPGEHLPKIPKPPLPPATERHDRGSPLTGKKPPVPRHMRGPERRENDEDDVHQRLPPQPSPLPMSSNTFPSRSTKPSPKNSLPLTHSSGAFSESNPNFSQSASLPPYFSQGPLNRPLPRVEGRNFSPVPSKPRPQSPGEEQNSLNEDWYVSYITRTEAEAALRKINQDGTFLVRDSSKKTISNPYVLMVLYKDKVYNIQIRYQEESQVYLLGTGLRGKEDFLSVSDIIDYFRKMPLLLIDGKNRGSRYQCTLTYAASYP
SIO_010081: LCP2
subclass of: SO_0000673
so part of: LCP2
location: complement(join(2209125..2209247,2211398..2211553,2213741..2213818,2214416..2214507,2217686..2217735,2219359..2219488,2220182..2220194,2222497..2222527,2223853..2223960,2224053..2224072,2224183..2224208,2227810..2227893,2227987..2228056,2230374..2230471,2232461..2232659,2235939..2235976,2236569..2236600,2236995..2237060,2246171..2246217,2251197..2251259,2255766..2255843))
location: region:2209125-2255843:-1
so has part: feature:2255766-2255843:-1:exon
so has part: feature:2251197-2251259:-1:exon
so has part: feature:2246171-2246217:-1:exon
so has part: feature:2236995-2237060:-1:exon
so has part: feature:2236569-2236600:-1:exon
so has part: feature:2235939-2235976:-1:exon
so has part: feature:2232461-2232659:-1:exon
so has part: feature:2230374-2230471:-1:exon
so has part: feature:2227987-2228056:-1:exon
so has part: feature:2227810-2227893:-1:exon
so has part: feature:2224183-2224208:-1:exon
so has part: feature:2224053-2224072:-1:exon
so has part: feature:2223853-2223960:-1:exon
so has part: feature:2222497-2222527:-1:exon
so has part: feature:2220182-2220194:-1:exon
so has part: feature:2219359-2219488:-1:exon
so has part: feature:2217686-2217735:-1:exon
so has part: feature:2214416-2214507:-1:exon
so has part: feature:2213741-2213818:-1:exon
so has part: feature:2211398-2211553:-1:exon
so has part: feature:2209125-2209247:-1:exon

XP_013828157.2
type: Protein
SIO_000068: ncbiprotein

position:2209125:-1
position: 2209125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2255843:-1
position: 2255843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2255766-2255843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2251197-2251259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2246171-2246217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2236995-2237060:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2236569-2236600:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2235939-2235976:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2232461-2232659:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2230374-2230471:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2227987-2228056:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2227810-2227893:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2224183-2224208:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2224053-2224072:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2223853-2223960:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2222497-2222527:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2220182-2220194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2219359-2219488:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2217686-2217735:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2214416-2214507:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2213741-2213818:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2211398-2211553:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2209125-2209247:-1:exon

LOC106503306
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503306
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2260866..2293660
location: region:2260866-2293660:1
so has part: feature:2260866-2293660:1:exon
subclass of: SO_0000011

106503306
type: Gene
SIO_000068: ncbigene

position:2260866:1
position: 2260866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2293660:1
position: 2293660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2260866-2293660:1:exon

LOC106503306
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503306
product: uncharacterized LOC106503306
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001296945.2
SIO_010081: LOC106503306
subclass of: SO_0000673
so part of: LOC106503306
location: join(2260866..2260996,2279545..2279693,2292478..2293660)
location: region:2260866-2293660:1
so has part: feature:2260866-2260996:1:exon
so has part: feature:2279545-2279693:1:exon
so has part: feature:2292478-2293660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2260866-2260996:1:exon

position:2260996:1
position: 2260996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2279545-2279693:1:exon

position:2279545:1
position: 2279545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2279693:1
position: 2279693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2292478-2293660:1:exon

position:2292478:1
position: 2292478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNMB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: KCNMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2333554..2349921)
location: region:2333554-2349921:-1
so has part: feature:2333554-2349921:-1:exon
subclass of: SO_0000010

102185781
type: Gene
SIO_000068: ncbigene

position:2333554:-1
position: 2333554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2349921:-1
position: 2349921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2333554-2349921:-1:exon

KCNMB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: KCNMB1
product: potassium calcium-activated channel subfamily M regulatory beta subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 9 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005694520.3
SIO_010081: KCNMB1
subclass of: SO_0000673
so part of: KCNMB1
location: complement(join(2333554..2338818,2343981..2344152,2345510..2345667,2349562..2349921))
location: region:2333554-2349921:-1
so has part: feature:2349562-2349921:-1:exon
so has part: feature:2345510-2345667:-1:exon
so has part: feature:2343981-2344152:-1:exon
so has part: feature:2333554-2338818:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2349562-2349921:-1:exon

position:2349562:-1
position: 2349562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2345510-2345667:-1:exon

position:2345510:-1
position: 2345510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2345667:-1
position: 2345667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2343981-2344152:-1:exon

position:2343981:-1
position: 2343981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2344152:-1
position: 2344152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2333554-2338818:-1:exon

position:2338818:-1
position: 2338818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNMB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: KCNMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-activated potassium channel subunit beta-1
translation: MGKKLVMAQKRGETRALCLGVAMVVGAVITYYILGTTVLPLYQKSVWTQESTCHLIETNIRDQEELEGKRVPQYPCLWVNVSSVGRWAVLYHTEDTRDQNQQCSYIPSSLDNYQVARADVEKVRARFHEHQDFFCFSTTRENETSVLYRRLYGPQSLLFSLFWPTFLLTGGLLIIVMVKINQSLSILAAQR
SIO_010081: KCNMB1
subclass of: SO_0000673
so part of: KCNMB1
location: complement(join(2338549..2338818,2343981..2344152,2345510..2345643))
location: region:2338549-2345643:-1
so has part: feature:2345510-2345643:-1:exon
so has part: feature:2343981-2344152:-1:exon
so has part: feature:2338549-2338818:-1:exon

XP_005694577.2
type: Protein
SIO_000068: ncbiprotein

position:2338549:-1
position: 2338549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2345643:-1
position: 2345643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2345510-2345643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2343981-2344152:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2338549-2338818:-1:exon

KCNIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2468938..2740274
location: region:2468938-2740274:1
so has part: feature:2468938-2740274:1:exon
subclass of: SO_0000010

102185117
type: Gene
SIO_000068: ncbigene

position:2468938:1
position: 2468938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2740274:1
position: 2740274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2468938-2740274:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 10 ESTs, 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005694519.3
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(2468938..2469542,2727067..2727191,2727954..2728023,2729475..2729545,2730229..2730336,2734416..2734520,2735819..2735881,2739433..2740274)
location: region:2468938-2740274:1
so has part: feature:2468938-2469542:1:exon
so has part: feature:2727067-2727191:1:exon
so has part: feature:2727954-2728023:1:exon
so has part: feature:2729475-2729545:1:exon
so has part: feature:2730229-2730336:1:exon
so has part: feature:2734416-2734520:1:exon
so has part: feature:2735819-2735881:1:exon
so has part: feature:2739433-2740274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2468938-2469542:1:exon

position:2469542:1
position: 2469542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2727067-2727191:1:exon

position:2727067:1
position: 2727067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2727191:1
position: 2727191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2727954-2728023:1:exon

position:2727954:1
position: 2727954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2728023:1
position: 2728023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2729475-2729545:1:exon

position:2729475:1
position: 2729475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2729545:1
position: 2729545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2730229-2730336:1:exon

position:2730229:1
position: 2730229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2730336:1
position: 2730336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2734416-2734520:1:exon

position:2734416:1
position: 2734416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2734520:1
position: 2734520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2735819-2735881:1:exon

position:2735819:1
position: 2735819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2735881:1
position: 2735881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2739433-2740274:1:exon

position:2739433:1
position: 2739433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1
translation: MGAVMGTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFHAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDIFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(2469482..2469542,2727067..2727191,2727954..2728023,2729475..2729545,2730229..2730336,2734416..2734520,2735819..2735881,2739433..2739480)
location: region:2469482-2739480:1
so has part: feature:2469482-2469542:1:exon
so has part: feature:2727067-2727191:1:exon
so has part: feature:2727954-2728023:1:exon
so has part: feature:2729475-2729545:1:exon
so has part: feature:2730229-2730336:1:exon
so has part: feature:2734416-2734520:1:exon
so has part: feature:2735819-2735881:1:exon
so has part: feature:2739433-2739480:1:exon

XP_005694576.1
type: Protein
SIO_000068: ncbiprotein

position:2469482:1
position: 2469482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2739480:1
position: 2739480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2469482-2469542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2727067-2727191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2727954-2728023:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2729475-2729545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2730229-2730336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2734416-2734520:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2735819-2735881:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2739433-2739480:1:exon

LOC102184843
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102184843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2533851..2534699
location: region:2533851-2534699:1
so has part: feature:2533851-2534699:1:exon

102184843
type: Gene
SIO_000068: ncbigene

position:2533851:1
position: 2533851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2534699:1
position: 2534699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2533851-2534699:1:exon

LOC102184843
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102184843
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102184843
subclass of: SO_0000673
so part of: LOC102184843
location: 2533851..2534699
location: region:2533851-2534699:1
so has part: feature:2533851-2534699:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2533851-2534699:1:exon

GABRP
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: GABRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2778080..2804309
location: region:2778080-2804309:1
so has part: feature:2778080-2804309:1:exon
subclass of: SO_0000010

102186243
type: Gene
SIO_000068: ncbigene

position:2778080:1
position: 2778080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2804309:1
position: 2804309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2778080-2804309:1:exon

GABRP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: GABRP
product: gamma-aminobutyric acid type A receptor pi subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 7 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005694522.3
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(2778080..2778224,2783054..2783150,2783872..2783990,2788310..2788377,2789224..2789441,2791064..2791146,2794269..2794406,2794857..2795009,2795450..2795637,2802383..2804309)
location: region:2778080-2804309:1
so has part: feature:2778080-2778224:1:exon
so has part: feature:2783054-2783150:1:exon
so has part: feature:2783872-2783990:1:exon
so has part: feature:2788310-2788377:1:exon
so has part: feature:2789224-2789441:1:exon
so has part: feature:2791064-2791146:1:exon
so has part: feature:2794269-2794406:1:exon
so has part: feature:2794857-2795009:1:exon
so has part: feature:2795450-2795637:1:exon
so has part: feature:2802383-2804309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2778080-2778224:1:exon

position:2778224:1
position: 2778224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2783054-2783150:1:exon

position:2783054:1
position: 2783054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2783150:1
position: 2783150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2783872-2783990:1:exon

position:2783872:1
position: 2783872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2783990:1
position: 2783990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2788310-2788377:1:exon

position:2788310:1
position: 2788310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2788377:1
position: 2788377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2789224-2789441:1:exon

position:2789224:1
position: 2789224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2789441:1
position: 2789441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2791064-2791146:1:exon

position:2791064:1
position: 2791064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2791146:1
position: 2791146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2794269-2794406:1:exon

position:2794269:1
position: 2794269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2794406:1
position: 2794406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2794857-2795009:1:exon

position:2794857:1
position: 2794857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2795009:1
position: 2795009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2795450-2795637:1:exon

position:2795450:1
position: 2795450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2795637:1
position: 2795637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2802383-2804309:1:exon

position:2802383:1
position: 2802383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABRP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: GABRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit pi
translation: MRRSLHLTFVCLSLFSARTCVQGNQFNTEVSRSDKLSLPGFENLTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWMDQRLVFEGNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQQYFTSVTRSQQETGNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRGKAKEVEEVNITNIINSSISSFKRKISFASIEISGDNVDYSDLTMKTSDKFKFVFRDKLGRIVDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWAYYMYF
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(2783098..2783150,2783872..2783990,2788310..2788377,2789224..2789441,2791064..2791146,2794269..2794406,2794857..2795009,2795450..2795637,2802383..2802685)
location: region:2783098-2802685:1
so has part: feature:2783098-2783150:1:exon
so has part: feature:2783872-2783990:1:exon
so has part: feature:2788310-2788377:1:exon
so has part: feature:2789224-2789441:1:exon
so has part: feature:2791064-2791146:1:exon
so has part: feature:2794269-2794406:1:exon
so has part: feature:2794857-2795009:1:exon
so has part: feature:2795450-2795637:1:exon
so has part: feature:2802383-2802685:1:exon

XP_005694579.2
type: Protein
SIO_000068: ncbiprotein

position:2783098:1
position: 2783098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2802685:1
position: 2802685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2783098-2783150:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2783872-2783990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2788310-2788377:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2789224-2789441:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791064-2791146:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2794269-2794406:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2794857-2795009:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2795450-2795637:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2802383-2802685:1:exon

RANBP17
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: RANBP17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2852967..3209093
location: region:2852967-3209093:1
so has part: feature:2852967-3209093:1:exon
subclass of: SO_0000010

102186520
type: Gene
SIO_000068: ncbigene

position:2852967:1
position: 2852967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3209093:1
position: 3209093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2852967-3209093:1:exon

RANBP17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RANBP17
product: RAN binding protein 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018065634.1
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(2852967..2853107,2868266..2868412,2871868..2871958,2880206..2880372,2885760..2885825,2892071..2892175,2892952..2893117,2895838..2895911,2898114..2898233,2899556..2899702,2900855..2901027,2903232..2903425,2938328..2938433,2958549..2958684,3101314..3101387,3102414..3102494,3111736..3111799,3111892..3112000,3125729..3125832,3131522..3131610,3140891..3140998,3143147..3143229,3155530..3155744,3159625..3159763,3175988..3176154,3204258..3204356,3206215..3206342,3208316..3209093)
location: region:2852967-3209093:1
so has part: feature:2852967-2853107:1:exon
so has part: feature:2868266-2868412:1:exon
so has part: feature:2871868-2871958:1:exon
so has part: feature:2880206-2880372:1:exon
so has part: feature:2885760-2885825:1:exon
so has part: feature:2892071-2892175:1:exon
so has part: feature:2892952-2893117:1:exon
so has part: feature:2895838-2895911:1:exon
so has part: feature:2898114-2898233:1:exon
so has part: feature:2899556-2899702:1:exon
so has part: feature:2900855-2901027:1:exon
so has part: feature:2903232-2903425:1:exon
so has part: feature:2938328-2938433:1:exon
so has part: feature:2958549-2958684:1:exon
so has part: feature:3101314-3101387:1:exon
so has part: feature:3102414-3102494:1:exon
so has part: feature:3111736-3111799:1:exon
so has part: feature:3111892-3112000:1:exon
so has part: feature:3125729-3125832:1:exon
so has part: feature:3131522-3131610:1:exon
so has part: feature:3140891-3140998:1:exon
so has part: feature:3143147-3143229:1:exon
so has part: feature:3155530-3155744:1:exon
so has part: feature:3159625-3159763:1:exon
so has part: feature:3175988-3176154:1:exon
so has part: feature:3204258-3204356:1:exon
so has part: feature:3206215-3206342:1:exon
so has part: feature:3208316-3209093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2852967-2853107:1:exon

position:2853107:1
position: 2853107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2868266-2868412:1:exon

position:2868266:1
position: 2868266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2868412:1
position: 2868412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2871868-2871958:1:exon

position:2871868:1
position: 2871868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2871958:1
position: 2871958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2880206-2880372:1:exon

position:2880206:1
position: 2880206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2880372:1
position: 2880372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2885760-2885825:1:exon

position:2885760:1
position: 2885760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2885825:1
position: 2885825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2892071-2892175:1:exon

position:2892071:1
position: 2892071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2892175:1
position: 2892175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2892952-2893117:1:exon

position:2892952:1
position: 2892952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2893117:1
position: 2893117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2895838-2895911:1:exon

position:2895838:1
position: 2895838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2895911:1
position: 2895911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2898114-2898233:1:exon

position:2898114:1
position: 2898114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2898233:1
position: 2898233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2899556-2899702:1:exon

position:2899556:1
position: 2899556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2899702:1
position: 2899702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2900855-2901027:1:exon

position:2900855:1
position: 2900855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2901027:1
position: 2901027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2903232-2903425:1:exon

position:2903232:1
position: 2903232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2903425:1
position: 2903425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2938328-2938433:1:exon

position:2938328:1
position: 2938328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2938433:1
position: 2938433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2958549-2958684:1:exon

position:2958549:1
position: 2958549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2958684:1
position: 2958684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3101314-3101387:1:exon

position:3101314:1
position: 3101314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3101387:1
position: 3101387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3102414-3102494:1:exon

position:3102414:1
position: 3102414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3102494:1
position: 3102494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3111736-3111799:1:exon

position:3111736:1
position: 3111736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3111799:1
position: 3111799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3111892-3112000:1:exon

position:3111892:1
position: 3111892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3112000:1
position: 3112000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3125729-3125832:1:exon

position:3125729:1
position: 3125729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3125832:1
position: 3125832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3131522-3131610:1:exon

position:3131522:1
position: 3131522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3131610:1
position: 3131610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3140891-3140998:1:exon

position:3140891:1
position: 3140891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3140998:1
position: 3140998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3143147-3143229:1:exon

position:3143147:1
position: 3143147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3143229:1
position: 3143229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3155530-3155744:1:exon

position:3155530:1
position: 3155530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3155744:1
position: 3155744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3159625-3159763:1:exon

position:3159625:1
position: 3159625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3159763:1
position: 3159763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3175988-3176154:1:exon

position:3175988:1
position: 3175988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3176154:1
position: 3176154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3204258-3204356:1:exon

position:3204258:1
position: 3204258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3204356:1
position: 3204356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3206215-3206342:1:exon

position:3206215:1
position: 3206215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3206342:1
position: 3206342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3208316-3209093:1:exon

position:3208316:1
position: 3208316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RANBP17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RANBP17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 17
translation: MALHLQSLAELEALCTHLYIGTDLTQRIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQLLAATCLSKLVSRVSPLPVEQRIDIRNYILNYVASQPKLAPFVIQALIQVIAKITKSGWFEVQKDRFVFREIIADVKTFLQGAMEHCIIGVIILSELTQEMNLVDYSRPSAKHRKIATSFRDTSLKDILVLACSLLKEILAKPLNLQDQDQQNLVMQVLKLVLNCLNFDFIGSSADESADDLCTVQIPTTWRAIFLEPETLDLFFNLYHSLPPLLSQLALSCLVQFASTRRSLFSSPERAKYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKEYPEVIRLIANFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITKAFITSRLESVAVVVRGNLDDPLEDTTTVFQQLEQLCTVSRCEYEKTCTLLAQLFDQNAQNYQKLLHSASRMTVDMAIQEGRLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTGLPQCSNEKIELAILWFLDQFRKTYVGDQLQRTSKVYARMSEVLGITDDNHVLETFMTKIVTNLKYWGRCEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTSEHFPFLGISGSYSLSDFRCRTAFYTALTRLLMVDLGEDEDEFENFMLPLTVSFETVLQIFNNNFKQEDVKRMLIGLARDLRGIAFALNTKTSYTMLFDWMYPTYLPILQRAIEQWYGEPACTTPILKLMAELMQNRSQRLNFDVSSPNGILLFREASKMICTYGNQILSLGSLSKDQIYPMKLKGISICYSALKSALCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFITSLDPPVLLYVLTSISEGLTALDTVVSSSCCTSLDYIVTYLFKHIAKEGKKSLRCREATQAGQRLLHFMQQNPEVLQQMTSVLMNTIVFEDCRNQWSVSRPLLGLVLLNEKYFGELRAGLINSQPLPKQEVLAQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDMAEALRSDGSPEPLDMMS
SIO_010081: RANBP17
subclass of: SO_0000673
so part of: RANBP17
location: join(2853090..2853107,2868266..2868412,2871868..2871958,2880206..2880372,2885760..2885825,2892071..2892175,2892952..2893117,2895838..2895911,2898114..2898233,2899556..2899702,2900855..2901027,2903232..2903425,2938328..2938433,2958549..2958684,3101314..3101387,3102414..3102494,3111736..3111799,3111892..3112000,3125729..3125832,3131522..3131610,3140891..3140998,3143147..3143229,3155530..3155744,3159625..3159763,3175988..3176154,3204258..3204356,3206215..3206342,3208316..3208406)
location: region:2853090-3208406:1
so has part: feature:2853090-2853107:1:exon
so has part: feature:2868266-2868412:1:exon
so has part: feature:2871868-2871958:1:exon
so has part: feature:2880206-2880372:1:exon
so has part: feature:2885760-2885825:1:exon
so has part: feature:2892071-2892175:1:exon
so has part: feature:2892952-2893117:1:exon
so has part: feature:2895838-2895911:1:exon
so has part: feature:2898114-2898233:1:exon
so has part: feature:2899556-2899702:1:exon
so has part: feature:2900855-2901027:1:exon
so has part: feature:2903232-2903425:1:exon
so has part: feature:2938328-2938433:1:exon
so has part: feature:2958549-2958684:1:exon
so has part: feature:3101314-3101387:1:exon
so has part: feature:3102414-3102494:1:exon
so has part: feature:3111736-3111799:1:exon
so has part: feature:3111892-3112000:1:exon
so has part: feature:3125729-3125832:1:exon
so has part: feature:3131522-3131610:1:exon
so has part: feature:3140891-3140998:1:exon
so has part: feature:3143147-3143229:1:exon
so has part: feature:3155530-3155744:1:exon
so has part: feature:3159625-3159763:1:exon
so has part: feature:3175988-3176154:1:exon
so has part: feature:3204258-3204356:1:exon
so has part: feature:3206215-3206342:1:exon
so has part: feature:3208316-3208406:1:exon

XP_017921123.1
type: Protein
SIO_000068: ncbiprotein

position:2853090:1
position: 2853090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3208406:1
position: 3208406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2853090-2853107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2868266-2868412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2871868-2871958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2880206-2880372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2885760-2885825:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2892071-2892175:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2892952-2893117:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2895838-2895911:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2898114-2898233:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2899556-2899702:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2900855-2901027:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2903232-2903425:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2938328-2938433:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2958549-2958684:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3101314-3101387:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3102414-3102494:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3111736-3111799:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3111892-3112000:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3125729-3125832:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3131522-3131610:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3140891-3140998:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3143147-3143229:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3155530-3155744:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3159625-3159763:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3175988-3176154:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3204258-3204356:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3206215-3206342:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3208316-3208406:1:exon

LOC106503304
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3202531..3213324)
location: region:3202531-3213324:-1
so has part: feature:3202531-3213324:-1:exon
subclass of: SO_0000011

106503304
type: Gene
SIO_000068: ncbigene

position:3202531:-1
position: 3202531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3213324:-1
position: 3213324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202531-3213324:-1:exon

LOC106503304
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503304
product: uncharacterized LOC106503304, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001919794.1
SIO_010081: LOC106503304
subclass of: SO_0000673
so part of: LOC106503304
location: complement(join(3202531..3203648,3204038..3204341,3205044..3205128,3213075..3213324))
location: region:3202531-3213324:-1
so has part: feature:3213075-3213324:-1:exon
so has part: feature:3205044-3205128:-1:exon
so has part: feature:3204038-3204341:-1:exon
so has part: feature:3202531-3203648:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3213075-3213324:-1:exon

position:3213075:-1
position: 3213075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3205044-3205128:-1:exon

position:3205044:-1
position: 3205044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3205128:-1
position: 3205128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3204038-3204341:-1:exon

position:3204038:-1
position: 3204038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3204341:-1
position: 3204341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3202531-3203648:-1:exon

position:3203648:-1
position: 3203648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106503304
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503304
product: uncharacterized LOC106503304, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001296943.2
SIO_010081: LOC106503304
subclass of: SO_0000673
so part of: LOC106503304
location: complement(join(3202531..3203648,3204038..3204341,3205044..3205128,3211145..3211289))
location: region:3202531-3211289:-1
so has part: feature:3211145-3211289:-1:exon
so has part: feature:3205044-3205128:-1:exon
so has part: feature:3204038-3204341:-1:exon
so has part: feature:3202531-3203648:-1:exon

position:3211289:-1
position: 3211289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3211145-3211289:-1:exon

position:3211145:-1
position: 3211145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3205044-3205128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3204038-3204341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3202531-3203648:-1:exon

TLX3
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3218013..3220856
location: region:3218013-3220856:1
so has part: feature:3218013-3220856:1:exon
subclass of: SO_0000010

108638391
type: Gene
SIO_000068: ncbigene

position:3218013:1
position: 3218013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3220856:1
position: 3220856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3218013-3220856:1:exon

TLX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TLX3
product: T-cell leukemia homeobox 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018065472.1
SIO_010081: TLX3
subclass of: SO_0000673
so part of: TLX3
location: join(3218013..3218554,3218911..3219154,3220104..3220856)
location: region:3218013-3220856:1
so has part: feature:3218013-3218554:1:exon
so has part: feature:3218911-3219154:1:exon
so has part: feature:3220104-3220856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3218013-3218554:1:exon

position:3218554:1
position: 3218554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3218911-3219154:1:exon

position:3218911:1
position: 3218911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3219154:1
position: 3219154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3220104-3220856:1:exon

position:3220104:1
position: 3220104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell leukemia homeobox protein 3
translation: MEASASAQTPHPHEPISFGIDQILNSPDQDSAPAPRGPDGASYLGGPPGGRPGATYPSLPTSFAGLGAPFEDAGSYSVNLSLAPAGVIRVPAHRPLPGAVPPPLPSALPAMPSVPTVSSLGGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLMLQLQHDAFQKSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV
SIO_010081: TLX3
subclass of: SO_0000673
so part of: TLX3
location: join(3218134..3218554,3218911..3219154,3220104..3220314)
location: region:3218134-3220314:1
so has part: feature:3218134-3218554:1:exon
so has part: feature:3218911-3219154:1:exon
so has part: feature:3220104-3220314:1:exon

XP_017920961.1
type: Protein
SIO_000068: ncbiprotein

position:3218134:1
position: 3218134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3220314:1
position: 3220314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3218134-3218554:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3218911-3219154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3220104-3220314:1:exon

NPM1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3263173..3276952
location: region:3263173-3276952:1
so has part: feature:3263173-3276952:1:exon
subclass of: SO_0000010

102181461
type: Gene
SIO_000068: ncbigene

position:3263173:1
position: 3263173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3276952:1
position: 3276952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3263173-3276952:1:exon

NPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NPM1
product: nucleophosmin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 207 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_013972697.2
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(3263173..3263360,3265172..3265251,3265806..3265925,3266213..3266306,3266509..3266615,3266715..3266785,3271007..3271070,3271415..3271498,3272248..3272349,3274088..3274162,3276582..3276952)
location: region:3263173-3276952:1
so has part: feature:3263173-3263360:1:exon
so has part: feature:3265172-3265251:1:exon
so has part: feature:3265806-3265925:1:exon
so has part: feature:3266213-3266306:1:exon
so has part: feature:3266509-3266615:1:exon
so has part: feature:3266715-3266785:1:exon
so has part: feature:3271007-3271070:1:exon
so has part: feature:3271415-3271498:1:exon
so has part: feature:3272248-3272349:1:exon
so has part: feature:3274088-3274162:1:exon
so has part: feature:3276582-3276952:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3263173-3263360:1:exon

position:3263360:1
position: 3263360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3265172-3265251:1:exon

position:3265172:1
position: 3265172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3265251:1
position: 3265251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3265806-3265925:1:exon

position:3265806:1
position: 3265806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3265925:1
position: 3265925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3266213-3266306:1:exon

position:3266213:1
position: 3266213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3266306:1
position: 3266306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3266509-3266615:1:exon

position:3266509:1
position: 3266509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3266615:1
position: 3266615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3266715-3266785:1:exon

position:3266715:1
position: 3266715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3266785:1
position: 3266785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3271007-3271070:1:exon

position:3271007:1
position: 3271007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3271070:1
position: 3271070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3271415-3271498:1:exon

position:3271415:1
position: 3271415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3271498:1
position: 3271498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3272248-3272349:1:exon

position:3272248:1
position: 3272248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3272349:1
position: 3272349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3274088-3274162:1:exon

position:3274088:1
position: 3274088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3274162:1
position: 3274162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3276582-3276952:1:exon

position:3276582:1
position: 3276582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NPM1
product: nucleophosmin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 mRNAs, 249 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_013972698.2
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(3263173..3263360,3265172..3265251,3265806..3265925,3266213..3266306,3266509..3266615,3266715..3266785,3271007..3271061,3271415..3271498,3272248..3272349,3274088..3274162,3276582..3276952)
location: region:3263173-3276952:1
so has part: feature:3263173-3263360:1:exon
so has part: feature:3265172-3265251:1:exon
so has part: feature:3265806-3265925:1:exon
so has part: feature:3266213-3266306:1:exon
so has part: feature:3266509-3266615:1:exon
so has part: feature:3266715-3266785:1:exon
so has part: feature:3271007-3271061:1:exon
so has part: feature:3271415-3271498:1:exon
so has part: feature:3272248-3272349:1:exon
so has part: feature:3274088-3274162:1:exon
so has part: feature:3276582-3276952:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3263173-3263360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3265172-3265251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3265806-3265925:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3266213-3266306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3266509-3266615:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3266715-3266785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3271007-3271061:1:exon

position:3271061:1
position: 3271061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3271415-3271498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3272248-3272349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3274088-3274162:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3276582-3276952:1:exon

NPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NPM1
product: nucleophosmin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 159 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_013972699.2
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(3263173..3263360,3265172..3265251,3265806..3265925,3266213..3266306,3266509..3266615,3266715..3266785,3271007..3271070,3271415..3271498,3272248..3272349,3273349..3273653)
location: region:3263173-3273653:1
so has part: feature:3263173-3263360:1:exon
so has part: feature:3265172-3265251:1:exon
so has part: feature:3265806-3265925:1:exon
so has part: feature:3266213-3266306:1:exon
so has part: feature:3266509-3266615:1:exon
so has part: feature:3266715-3266785:1:exon
so has part: feature:3271007-3271070:1:exon
so has part: feature:3271415-3271498:1:exon
so has part: feature:3272248-3272349:1:exon
so has part: feature:3273349-3273653:1:exon

position:3273653:1
position: 3273653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3263173-3263360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3265172-3265251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3265806-3265925:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3266213-3266306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3266509-3266615:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3266715-3266785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3271007-3271070:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271415-3271498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3272248-3272349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3273349-3273653:1:exon

position:3273349:1
position: 3273349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NPM1
product: nucleophosmin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 180 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_013972700.2
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(3263174..3263360,3265172..3265251,3265806..3265925,3266213..3266306,3266509..3266615,3266715..3266785,3271007..3271061,3271415..3271498,3272248..3272349,3273349..3273653)
location: region:3263174-3273653:1
so has part: feature:3263174-3263360:1:exon
so has part: feature:3265172-3265251:1:exon
so has part: feature:3265806-3265925:1:exon
so has part: feature:3266213-3266306:1:exon
so has part: feature:3266509-3266615:1:exon
so has part: feature:3266715-3266785:1:exon
so has part: feature:3271007-3271061:1:exon
so has part: feature:3271415-3271498:1:exon
so has part: feature:3272248-3272349:1:exon
so has part: feature:3273349-3273653:1:exon

position:3263174:1
position: 3263174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3263174-3263360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3265172-3265251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3265806-3265925:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3266213-3266306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3266509-3266615:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3266715-3266785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3271007-3271061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271415-3271498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3272248-3272349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3273349-3273653:1:exon

NPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleophosmin isoform X1
translation: MEDSMDMDMSPLRPQNYLFGCELKADRDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVEEDAESEEEEEEEVKLLSISGKRSAPGSGSKVPQKKVKLAADEDEDDDDDDDDDDEEDDDDDDFDEEVEEKAPVKKVSKSVRDTPAKNAQKSNQNGKDSKPSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(3263303..3263360,3265172..3265251,3265806..3265925,3266213..3266306,3266509..3266615,3266715..3266785,3271007..3271070,3271415..3271498,3272248..3272349,3274088..3274162,3276582..3276620)
location: region:3263303-3276620:1
so has part: feature:3263303-3263360:1:exon
so has part: feature:3265172-3265251:1:exon
so has part: feature:3265806-3265925:1:exon
so has part: feature:3266213-3266306:1:exon
so has part: feature:3266509-3266615:1:exon
so has part: feature:3266715-3266785:1:exon
so has part: feature:3271007-3271070:1:exon
so has part: feature:3271415-3271498:1:exon
so has part: feature:3272248-3272349:1:exon
so has part: feature:3274088-3274162:1:exon
so has part: feature:3276582-3276620:1:exon

XP_013828151.2
type: Protein
SIO_000068: ncbiprotein

position:3263303:1
position: 3263303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3276620:1
position: 3276620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3263303-3263360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3265172-3265251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3265806-3265925:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3266213-3266306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3266509-3266615:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3266715-3266785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3271007-3271070:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271415-3271498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3272248-3272349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3274088-3274162:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3276582-3276620:1:exon

NPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleophosmin isoform X2
translation: MEDSMDMDMSPLRPQNYLFGCELKADRDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVEEDAESEEEEEEEVKLLSISGKRSAPGSGSKVPQKKVKLAADEDEDDDDDDDDDDEEDDDDDDFDEEVEEKAPVKKSVRDTPAKNAQKSNQNGKDSKPSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(3263303..3263360,3265172..3265251,3265806..3265925,3266213..3266306,3266509..3266615,3266715..3266785,3271007..3271061,3271415..3271498,3272248..3272349,3274088..3274162,3276582..3276620)
location: region:3263303-3276620:1
so has part: feature:3263303-3263360:1:exon
so has part: feature:3265172-3265251:1:exon
so has part: feature:3265806-3265925:1:exon
so has part: feature:3266213-3266306:1:exon
so has part: feature:3266509-3266615:1:exon
so has part: feature:3266715-3266785:1:exon
so has part: feature:3271007-3271061:1:exon
so has part: feature:3271415-3271498:1:exon
so has part: feature:3272248-3272349:1:exon
so has part: feature:3274088-3274162:1:exon
so has part: feature:3276582-3276620:1:exon

XP_013828152.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3263303-3263360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3265172-3265251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3265806-3265925:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3266213-3266306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3266509-3266615:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3266715-3266785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3271007-3271061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271415-3271498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3272248-3272349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3274088-3274162:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3276582-3276620:1:exon

NPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleophosmin isoform X3
translation: MEDSMDMDMSPLRPQNYLFGCELKADRDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVEEDAESEEEEEEEVKLLSISGKRSAPGSGSKVPQKKVKLAADEDEDDDDDDDDDDEEDDDDDDFDEEVEEKAPVKKVSKSVRDTPAKNAQKSNQNGKDSKPSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKAH
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(3263303..3263360,3265172..3265251,3265806..3265925,3266213..3266306,3266509..3266615,3266715..3266785,3271007..3271070,3271415..3271498,3272248..3272349,3273349..3273357)
location: region:3263303-3273357:1
so has part: feature:3263303-3263360:1:exon
so has part: feature:3265172-3265251:1:exon
so has part: feature:3265806-3265925:1:exon
so has part: feature:3266213-3266306:1:exon
so has part: feature:3266509-3266615:1:exon
so has part: feature:3266715-3266785:1:exon
so has part: feature:3271007-3271070:1:exon
so has part: feature:3271415-3271498:1:exon
so has part: feature:3272248-3272349:1:exon
so has part: feature:3273349-3273357:1:exon

XP_013828153.2
type: Protein
SIO_000068: ncbiprotein

position:3273357:1
position: 3273357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3263303-3263360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3265172-3265251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3265806-3265925:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3266213-3266306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3266509-3266615:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3266715-3266785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3271007-3271070:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271415-3271498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3272248-3272349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3273349-3273357:1:exon

NPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleophosmin isoform X4
translation: MEDSMDMDMSPLRPQNYLFGCELKADRDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVEEDAESEEEEEEEVKLLSISGKRSAPGSGSKVPQKKVKLAADEDEDDDDDDDDDDEEDDDDDDFDEEVEEKAPVKKSVRDTPAKNAQKSNQNGKDSKPSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKAH
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(3263303..3263360,3265172..3265251,3265806..3265925,3266213..3266306,3266509..3266615,3266715..3266785,3271007..3271061,3271415..3271498,3272248..3272349,3273349..3273357)
location: region:3263303-3273357:1
so has part: feature:3263303-3263360:1:exon
so has part: feature:3265172-3265251:1:exon
so has part: feature:3265806-3265925:1:exon
so has part: feature:3266213-3266306:1:exon
so has part: feature:3266509-3266615:1:exon
so has part: feature:3266715-3266785:1:exon
so has part: feature:3271007-3271061:1:exon
so has part: feature:3271415-3271498:1:exon
so has part: feature:3272248-3272349:1:exon
so has part: feature:3273349-3273357:1:exon

XP_013828154.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3263303-3263360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3265172-3265251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3265806-3265925:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3266213-3266306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3266509-3266615:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3266715-3266785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3271007-3271061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271415-3271498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3272248-3272349:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3273349-3273357:1:exon

FGF18
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3286037..3322014
location: region:3286037-3322014:1
so has part: feature:3286037-3322014:1:exon
subclass of: SO_0000010

102178396
type: Gene
SIO_000068: ncbigene

position:3286037:1
position: 3286037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3322014:1
position: 3322014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3286037-3322014:1:exon

FGF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FGF18
product: fibroblast growth factor 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 5 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_018065624.1
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(3286037..3286607,3286777..3286813,3301789..3301969,3314083..3314189,3320905..3322014)
location: region:3286037-3322014:1
so has part: feature:3286037-3286607:1:exon
so has part: feature:3286777-3286813:1:exon
so has part: feature:3301789-3301969:1:exon
so has part: feature:3314083-3314189:1:exon
so has part: feature:3320905-3322014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3286037-3286607:1:exon

position:3286607:1
position: 3286607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3286777-3286813:1:exon

position:3286777:1
position: 3286777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3286813:1
position: 3286813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3301789-3301969:1:exon

position:3301789:1
position: 3301789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3301969:1
position: 3301969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3314083-3314189:1:exon

position:3314083:1
position: 3314083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3314189:1
position: 3314189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3320905-3322014:1:exon

position:3320905:1
position: 3320905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 18
translation: MYSAPSACTCLCLHFLLLCFQVQVLAAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSRTSGKHIQVLGRRISARGEDGDKYAQLLVETDTFGSQVRIKGKETEFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYPRGQAELQKPFKYTTVTKRSRRIRPTHPG
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(3286576..3286607,3286777..3286813,3301789..3301969,3314083..3314189,3320905..3321171)
location: region:3286576-3321171:1
so has part: feature:3286576-3286607:1:exon
so has part: feature:3286777-3286813:1:exon
so has part: feature:3301789-3301969:1:exon
so has part: feature:3314083-3314189:1:exon
so has part: feature:3320905-3321171:1:exon

XP_017921113.1
type: Protein
SIO_000068: ncbiprotein

position:3286576:1
position: 3286576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3321171:1
position: 3321171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3286576-3286607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3286777-3286813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3301789-3301969:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3314083-3314189:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3320905-3321171:1:exon

SMIM23
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SMIM23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3656369..3661384
location: region:3656369-3661384:1
so has part: feature:3656369-3661384:1:exon
subclass of: SO_0000010

102178664
type: Gene
SIO_000068: ncbigene

position:3656369:1
position: 3656369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3661384:1
position: 3661384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3656369-3661384:1:exon

SMIM23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SMIM23
product: small integral membrane protein 23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_005694577.1
SIO_010081: SMIM23
subclass of: SO_0000673
so part of: SMIM23
location: join(3656369..3656446,3660612..3660663,3660861..3660928,3661172..3661384)
location: region:3656369-3661384:1
so has part: feature:3656369-3656446:1:exon
so has part: feature:3660612-3660663:1:exon
so has part: feature:3660861-3660928:1:exon
so has part: feature:3661172-3661384:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3656369-3656446:1:exon

position:3656446:1
position: 3656446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3660612-3660663:1:exon

position:3660612:1
position: 3660612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3660663:1
position: 3660663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3660861-3660928:1:exon

position:3660861:1
position: 3660861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3660928:1
position: 3660928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3661172-3661384:1:exon

position:3661172:1
position: 3661172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMIM23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SMIM23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 23
translation: MVVHQVGSRGRVAAERRGSRCEDRKQTLLALLVLVLYVGTGITGRSWEVSERIRECNYPQNPVTSQVFEYQTSDSPEEPIKVMRTWLKENLHVFLEKLEKEVQELERLVRDLEEWLDALLGEGRPEELCSTLRNHL
SIO_010081: SMIM23
subclass of: SO_0000673
so part of: SMIM23
location: join(3656369..3656446,3660612..3660663,3660861..3660928,3661172..3661384)
location: region:3656369-3661384:1
so has part: feature:3656369-3656446:1:exon
so has part: feature:3660612-3660663:1:exon
so has part: feature:3660861-3660928:1:exon
so has part: feature:3661172-3661384:1:exon

XP_005694634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3656369-3656446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3660612-3660663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3660861-3660928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3661172-3661384:1:exon

LOC102178946
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102178946
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3693453..3694459)
location: region:3693453-3694459:-1
so has part: feature:3693453-3694459:-1:exon

102178946
type: Gene
SIO_000068: ncbigene

position:3693453:-1
position: 3693453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3694459:-1
position: 3694459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3693453-3694459:-1:exon

LOC102178946
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102178946
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102178946
subclass of: SO_0000673
so part of: LOC102178946
location: complement(3693453..3694459)
location: region:3693453-3694459:-1
so has part: feature:3693453-3694459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3693453-3694459:-1:exon

FBXW11
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3733432..3864061)
location: region:3733432-3864061:-1
so has part: feature:3733432-3864061:-1:exon
subclass of: SO_0000010

102187079
type: Gene
SIO_000068: ncbigene

position:3733432:-1
position: 3733432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3864061:-1
position: 3864061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733432-3864061:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 71 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018065494.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3733432..3736073,3742850..3743035,3744077..3744155,3745010..3745120,3746837..3746955,3749773..3750022,3751663..3751781,3753770..3753907,3761047..3761137,3762012..3762198,3772243..3772468,3775546..3775608,3854750..3854911,3863644..3863821))
location: region:3733432-3863821:-1
so has part: feature:3863644-3863821:-1:exon
so has part: feature:3854750-3854911:-1:exon
so has part: feature:3775546-3775608:-1:exon
so has part: feature:3772243-3772468:-1:exon
so has part: feature:3762012-3762198:-1:exon
so has part: feature:3761047-3761137:-1:exon
so has part: feature:3753770-3753907:-1:exon
so has part: feature:3751663-3751781:-1:exon
so has part: feature:3749773-3750022:-1:exon
so has part: feature:3746837-3746955:-1:exon
so has part: feature:3745010-3745120:-1:exon
so has part: feature:3744077-3744155:-1:exon
so has part: feature:3742850-3743035:-1:exon
so has part: feature:3733432-3736073:-1:exon

position:3863821:-1
position: 3863821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3863644-3863821:-1:exon

position:3863644:-1
position: 3863644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3854750-3854911:-1:exon

position:3854750:-1
position: 3854750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3854911:-1
position: 3854911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3775546-3775608:-1:exon

position:3775546:-1
position: 3775546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3775608:-1
position: 3775608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3772243-3772468:-1:exon

position:3772243:-1
position: 3772243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3772468:-1
position: 3772468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3762012-3762198:-1:exon

position:3762012:-1
position: 3762012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3762198:-1
position: 3762198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3761047-3761137:-1:exon

position:3761047:-1
position: 3761047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3761137:-1
position: 3761137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3753770-3753907:-1:exon

position:3753770:-1
position: 3753770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3753907:-1
position: 3753907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3751663-3751781:-1:exon

position:3751663:-1
position: 3751663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3751781:-1
position: 3751781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3749773-3750022:-1:exon

position:3749773:-1
position: 3749773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3750022:-1
position: 3750022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3746837-3746955:-1:exon

position:3746837:-1
position: 3746837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3746955:-1
position: 3746955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3745010-3745120:-1:exon

position:3745010:-1
position: 3745010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3745120:-1
position: 3745120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3744077-3744155:-1:exon

position:3744077:-1
position: 3744077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3744155:-1
position: 3744155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3742850-3743035:-1:exon

position:3742850:-1
position: 3742850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3743035:-1
position: 3743035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3733432-3736073:-1:exon

position:3736073:-1
position: 3736073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 71 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018065488.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3733432..3736073,3742850..3743035,3744077..3744155,3745010..3745120,3746837..3746955,3749773..3750022,3751663..3751781,3753770..3753907,3761047..3761137,3762012..3762198,3772243..3772468,3775546..3775608,3822875..3822976,3863644..3863820))
location: region:3733432-3863820:-1
so has part: feature:3863644-3863820:-1:exon
so has part: feature:3822875-3822976:-1:exon
so has part: feature:3775546-3775608:-1:exon
so has part: feature:3772243-3772468:-1:exon
so has part: feature:3762012-3762198:-1:exon
so has part: feature:3761047-3761137:-1:exon
so has part: feature:3753770-3753907:-1:exon
so has part: feature:3751663-3751781:-1:exon
so has part: feature:3749773-3750022:-1:exon
so has part: feature:3746837-3746955:-1:exon
so has part: feature:3745010-3745120:-1:exon
so has part: feature:3744077-3744155:-1:exon
so has part: feature:3742850-3743035:-1:exon
so has part: feature:3733432-3736073:-1:exon

position:3863820:-1
position: 3863820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3863644-3863820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3822875-3822976:-1:exon

position:3822875:-1
position: 3822875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3822976:-1
position: 3822976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3775546-3775608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772243-3772468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3762012-3762198:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3761047-3761137:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3753770-3753907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3751663-3751781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3749773-3750022:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3746837-3746955:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3745010-3745120:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3744077-3744155:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3742850-3743035:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3733432-3736073:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 71 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_018065495.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3733636..3736073,3742850..3743035,3744077..3744155,3745010..3745120,3746837..3746955,3749773..3750022,3751663..3751781,3753770..3753907,3761047..3761137,3762012..3762198,3772243..3772468,3863644..3864061))
location: region:3733636-3864061:-1
so has part: feature:3863644-3864061:-1:exon
so has part: feature:3772243-3772468:-1:exon
so has part: feature:3762012-3762198:-1:exon
so has part: feature:3761047-3761137:-1:exon
so has part: feature:3753770-3753907:-1:exon
so has part: feature:3751663-3751781:-1:exon
so has part: feature:3749773-3750022:-1:exon
so has part: feature:3746837-3746955:-1:exon
so has part: feature:3745010-3745120:-1:exon
so has part: feature:3744077-3744155:-1:exon
so has part: feature:3742850-3743035:-1:exon
so has part: feature:3733636-3736073:-1:exon

position:3733636:-1
position: 3733636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3863644-3864061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3772243-3772468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3762012-3762198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3761047-3761137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3753770-3753907:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3751663-3751781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3749773-3750022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3746837-3746955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3745010-3745120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3744077-3744155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3742850-3743035:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3733636-3736073:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 71 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_018065493.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3733636..3736073,3742850..3743035,3744077..3744155,3745010..3745120,3746837..3746955,3749773..3750022,3751663..3751781,3753770..3753907,3761047..3761137,3762012..3762198,3772243..3772468,3775546..3775608,3863644..3864061))
location: region:3733636-3864061:-1
so has part: feature:3863644-3864061:-1:exon
so has part: feature:3775546-3775608:-1:exon
so has part: feature:3772243-3772468:-1:exon
so has part: feature:3762012-3762198:-1:exon
so has part: feature:3761047-3761137:-1:exon
so has part: feature:3753770-3753907:-1:exon
so has part: feature:3751663-3751781:-1:exon
so has part: feature:3749773-3750022:-1:exon
so has part: feature:3746837-3746955:-1:exon
so has part: feature:3745010-3745120:-1:exon
so has part: feature:3744077-3744155:-1:exon
so has part: feature:3742850-3743035:-1:exon
so has part: feature:3733636-3736073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3863644-3864061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3775546-3775608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3772243-3772468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3762012-3762198:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3761047-3761137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3753770-3753907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3751663-3751781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3749773-3750022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3746837-3746955:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3745010-3745120:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3744077-3744155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3742850-3743035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3733636-3736073:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 71 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_018065492.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3733636..3736073,3742850..3743035,3744077..3744155,3745010..3745120,3746837..3746955,3749773..3750022,3751663..3751781,3753770..3753907,3761047..3761137,3762012..3762198,3772243..3772468,3822875..3822976,3863644..3864061))
location: region:3733636-3864061:-1
so has part: feature:3863644-3864061:-1:exon
so has part: feature:3822875-3822976:-1:exon
so has part: feature:3772243-3772468:-1:exon
so has part: feature:3762012-3762198:-1:exon
so has part: feature:3761047-3761137:-1:exon
so has part: feature:3753770-3753907:-1:exon
so has part: feature:3751663-3751781:-1:exon
so has part: feature:3749773-3750022:-1:exon
so has part: feature:3746837-3746955:-1:exon
so has part: feature:3745010-3745120:-1:exon
so has part: feature:3744077-3744155:-1:exon
so has part: feature:3742850-3743035:-1:exon
so has part: feature:3733636-3736073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3863644-3864061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3822875-3822976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3772243-3772468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3762012-3762198:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3761047-3761137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3753770-3753907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3751663-3751781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3749773-3750022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3746837-3746955:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3745010-3745120:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3744077-3744155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3742850-3743035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3733636-3736073:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018065489.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3738047..3742269,3742850..3743035,3744077..3744155,3745010..3745120,3746837..3746955,3749773..3750022,3751663..3751781,3753770..3753907,3761047..3761137,3762012..3762198,3772243..3772468,3775546..3775608,3822875..3822976,3863644..3863820))
location: region:3738047-3863820:-1
so has part: feature:3863644-3863820:-1:exon
so has part: feature:3822875-3822976:-1:exon
so has part: feature:3775546-3775608:-1:exon
so has part: feature:3772243-3772468:-1:exon
so has part: feature:3762012-3762198:-1:exon
so has part: feature:3761047-3761137:-1:exon
so has part: feature:3753770-3753907:-1:exon
so has part: feature:3751663-3751781:-1:exon
so has part: feature:3749773-3750022:-1:exon
so has part: feature:3746837-3746955:-1:exon
so has part: feature:3745010-3745120:-1:exon
so has part: feature:3744077-3744155:-1:exon
so has part: feature:3742850-3743035:-1:exon
so has part: feature:3738047-3742269:-1:exon

position:3738047:-1
position: 3738047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3863644-3863820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3822875-3822976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3775546-3775608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772243-3772468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3762012-3762198:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3761047-3761137:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3753770-3753907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3751663-3751781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3749773-3750022:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3746837-3746955:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3745010-3745120:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3744077-3744155:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3742850-3743035:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3738047-3742269:-1:exon

position:3742269:-1
position: 3742269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018065490.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3742276..3742360,3742850..3743035,3744077..3744155,3745010..3745120,3746837..3746955,3749773..3750022,3751663..3751781,3753770..3753907,3761047..3761137,3762012..3762198,3772243..3772468,3775546..3775608,3822875..3822976,3863644..3863820))
location: region:3742276-3863820:-1
so has part: feature:3863644-3863820:-1:exon
so has part: feature:3822875-3822976:-1:exon
so has part: feature:3775546-3775608:-1:exon
so has part: feature:3772243-3772468:-1:exon
so has part: feature:3762012-3762198:-1:exon
so has part: feature:3761047-3761137:-1:exon
so has part: feature:3753770-3753907:-1:exon
so has part: feature:3751663-3751781:-1:exon
so has part: feature:3749773-3750022:-1:exon
so has part: feature:3746837-3746955:-1:exon
so has part: feature:3745010-3745120:-1:exon
so has part: feature:3744077-3744155:-1:exon
so has part: feature:3742850-3743035:-1:exon
so has part: feature:3742276-3742360:-1:exon

position:3742276:-1
position: 3742276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3863644-3863820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3822875-3822976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3775546-3775608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772243-3772468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3762012-3762198:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3761047-3761137:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3753770-3753907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3751663-3751781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3749773-3750022:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3746837-3746955:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3745010-3745120:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3744077-3744155:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3742850-3743035:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3742276-3742360:-1:exon

position:3742360:-1
position: 3742360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X5
translation: MEPDSVIEDKTIELMISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3742874..3743035,3744077..3744155,3745010..3745120,3746837..3746955,3749773..3750022,3751663..3751781,3753770..3753907,3761047..3761137,3762012..3762198,3772243..3772468,3863644..3863688))
location: region:3742874-3863688:-1
so has part: feature:3863644-3863688:-1:exon
so has part: feature:3772243-3772468:-1:exon
so has part: feature:3762012-3762198:-1:exon
so has part: feature:3761047-3761137:-1:exon
so has part: feature:3753770-3753907:-1:exon
so has part: feature:3751663-3751781:-1:exon
so has part: feature:3749773-3750022:-1:exon
so has part: feature:3746837-3746955:-1:exon
so has part: feature:3745010-3745120:-1:exon
so has part: feature:3744077-3744155:-1:exon
so has part: feature:3742874-3743035:-1:exon

XP_017920984.1
type: Protein
SIO_000068: ncbiprotein

position:3742874:-1
position: 3742874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3863688:-1
position: 3863688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3863644-3863688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3772243-3772468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3762012-3762198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3761047-3761137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3753770-3753907:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3751663-3751781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3749773-3750022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3746837-3746955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3745010-3745120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3744077-3744155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3742874-3743035:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X3
translation: MEPDSVIEDKTIELMNTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3742874..3743035,3744077..3744155,3745010..3745120,3746837..3746955,3749773..3750022,3751663..3751781,3753770..3753907,3761047..3761137,3762012..3762198,3772243..3772468,3775546..3775608,3863644..3863688))
location: region:3742874-3863688:-1
so has part: feature:3863644-3863688:-1:exon
so has part: feature:3775546-3775608:-1:exon
so has part: feature:3772243-3772468:-1:exon
so has part: feature:3762012-3762198:-1:exon
so has part: feature:3761047-3761137:-1:exon
so has part: feature:3753770-3753907:-1:exon
so has part: feature:3751663-3751781:-1:exon
so has part: feature:3749773-3750022:-1:exon
so has part: feature:3746837-3746955:-1:exon
so has part: feature:3745010-3745120:-1:exon
so has part: feature:3744077-3744155:-1:exon
so has part: feature:3742874-3743035:-1:exon

XP_017920982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3863644-3863688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3775546-3775608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3772243-3772468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3762012-3762198:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3761047-3761137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3753770-3753907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3751663-3751781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3749773-3750022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3746837-3746955:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3745010-3745120:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3744077-3744155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3742874-3743035:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X2
translation: MEPDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3742874..3743035,3744077..3744155,3745010..3745120,3746837..3746955,3749773..3750022,3751663..3751781,3753770..3753907,3761047..3761137,3762012..3762198,3772243..3772468,3822875..3822976,3863644..3863688))
location: region:3742874-3863688:-1
so has part: feature:3863644-3863688:-1:exon
so has part: feature:3822875-3822976:-1:exon
so has part: feature:3772243-3772468:-1:exon
so has part: feature:3762012-3762198:-1:exon
so has part: feature:3761047-3761137:-1:exon
so has part: feature:3753770-3753907:-1:exon
so has part: feature:3751663-3751781:-1:exon
so has part: feature:3749773-3750022:-1:exon
so has part: feature:3746837-3746955:-1:exon
so has part: feature:3745010-3745120:-1:exon
so has part: feature:3744077-3744155:-1:exon
so has part: feature:3742874-3743035:-1:exon

XP_017920981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3863644-3863688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3822875-3822976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3772243-3772468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3762012-3762198:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3761047-3761137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3753770-3753907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3751663-3751781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3749773-3750022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3746837-3746955:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3745010-3745120:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3744077-3744155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3742874-3743035:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X1
translation: MEPDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQNTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3742874..3743035,3744077..3744155,3745010..3745120,3746837..3746955,3749773..3750022,3751663..3751781,3753770..3753907,3761047..3761137,3762012..3762198,3772243..3772468,3775546..3775608,3822875..3822976,3863644..3863688))
location: region:3742874-3863688:-1
so has part: feature:3863644-3863688:-1:exon
so has part: feature:3822875-3822976:-1:exon
so has part: feature:3775546-3775608:-1:exon
so has part: feature:3772243-3772468:-1:exon
so has part: feature:3762012-3762198:-1:exon
so has part: feature:3761047-3761137:-1:exon
so has part: feature:3753770-3753907:-1:exon
so has part: feature:3751663-3751781:-1:exon
so has part: feature:3749773-3750022:-1:exon
so has part: feature:3746837-3746955:-1:exon
so has part: feature:3745010-3745120:-1:exon
so has part: feature:3744077-3744155:-1:exon
so has part: feature:3742874-3743035:-1:exon

XP_017920977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3863644-3863688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3822875-3822976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3775546-3775608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772243-3772468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3762012-3762198:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3761047-3761137:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3753770-3753907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3751663-3751781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3749773-3750022:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3746837-3746955:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3745010-3745120:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3744077-3744155:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3742874-3743035:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X1
translation: MEPDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQNTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3742874..3743035,3744077..3744155,3745010..3745120,3746837..3746955,3749773..3750022,3751663..3751781,3753770..3753907,3761047..3761137,3762012..3762198,3772243..3772468,3775546..3775608,3822875..3822976,3863644..3863688))
location: region:3742874-3863688:-1
so has part: feature:3863644-3863688:-1:exon
so has part: feature:3822875-3822976:-1:exon
so has part: feature:3775546-3775608:-1:exon
so has part: feature:3772243-3772468:-1:exon
so has part: feature:3762012-3762198:-1:exon
so has part: feature:3761047-3761137:-1:exon
so has part: feature:3753770-3753907:-1:exon
so has part: feature:3751663-3751781:-1:exon
so has part: feature:3749773-3750022:-1:exon
so has part: feature:3746837-3746955:-1:exon
so has part: feature:3745010-3745120:-1:exon
so has part: feature:3744077-3744155:-1:exon
so has part: feature:3742874-3743035:-1:exon

XP_017920978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3863644-3863688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3822875-3822976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3775546-3775608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772243-3772468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3762012-3762198:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3761047-3761137:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3753770-3753907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3751663-3751781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3749773-3750022:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3746837-3746955:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3745010-3745120:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3744077-3744155:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3742874-3743035:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X1
translation: MEPDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQNTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3742874..3743035,3744077..3744155,3745010..3745120,3746837..3746955,3749773..3750022,3751663..3751781,3753770..3753907,3761047..3761137,3762012..3762198,3772243..3772468,3775546..3775608,3822875..3822976,3863644..3863688))
location: region:3742874-3863688:-1
so has part: feature:3863644-3863688:-1:exon
so has part: feature:3822875-3822976:-1:exon
so has part: feature:3775546-3775608:-1:exon
so has part: feature:3772243-3772468:-1:exon
so has part: feature:3762012-3762198:-1:exon
so has part: feature:3761047-3761137:-1:exon
so has part: feature:3753770-3753907:-1:exon
so has part: feature:3751663-3751781:-1:exon
so has part: feature:3749773-3750022:-1:exon
so has part: feature:3746837-3746955:-1:exon
so has part: feature:3745010-3745120:-1:exon
so has part: feature:3744077-3744155:-1:exon
so has part: feature:3742874-3743035:-1:exon

XP_017920979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3863644-3863688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3822875-3822976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3775546-3775608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772243-3772468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3762012-3762198:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3761047-3761137:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3753770-3753907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3751663-3751781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3749773-3750022:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3746837-3746955:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3745010-3745120:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3744077-3744155:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3742874-3743035:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X4
translation: MEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(3742874..3743035,3744077..3744155,3745010..3745120,3746837..3746955,3749773..3750022,3751663..3751781,3753770..3753907,3761047..3761137,3762012..3762198,3772243..3772468,3775546..3775596))
location: region:3742874-3775596:-1
so has part: feature:3775546-3775596:-1:exon
so has part: feature:3772243-3772468:-1:exon
so has part: feature:3762012-3762198:-1:exon
so has part: feature:3761047-3761137:-1:exon
so has part: feature:3753770-3753907:-1:exon
so has part: feature:3751663-3751781:-1:exon
so has part: feature:3749773-3750022:-1:exon
so has part: feature:3746837-3746955:-1:exon
so has part: feature:3745010-3745120:-1:exon
so has part: feature:3744077-3744155:-1:exon
so has part: feature:3742874-3743035:-1:exon

XP_017920983.1
type: Protein
SIO_000068: ncbiprotein

position:3775596:-1
position: 3775596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3775546-3775596:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3772243-3772468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3762012-3762198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3761047-3761137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3753770-3753907:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3751663-3751781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3749773-3750022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3746837-3746955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3745010-3745120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3744077-3744155:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3742874-3743035:-1:exon

TRNAC-ACA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAC-ACA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3779959..3780030
location: region:3779959-3780030:1
so has part: feature:3779959-3780030:1:exon
subclass of: SO_0000663

108638421
type: Gene
SIO_000068: ncbigene

position:3779959:1
position: 3779959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3780030:1
position: 3780030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3779959-3780030:1:exon

TRNAC-ACA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAC-ACA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon ACA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3779992..3779994,aa:Cys,seq:aca)
SIO_010081: TRNAC-ACA
subclass of: SO_0000673
so part of: TRNAC-ACA
location: 3779959..3780030
location: region:3779959-3780030:1
so has part: feature:3779959-3780030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3779959-3780030:1:exon

LOC102187714
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102187714
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3864055..3908575
location: region:3864055-3908575:1
so has part: feature:3864055-3908575:1:exon
subclass of: SO_0000011

102187714
type: Gene
SIO_000068: ncbigene

position:3864055:1
position: 3864055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3908575:1
position: 3908575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3864055-3908575:1:exon

LOC102187714
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102187714
product: uncharacterized LOC102187714
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001296941.2
SIO_010081: LOC102187714
subclass of: SO_0000673
so part of: LOC102187714
location: join(3864055..3864296,3869664..3869784,3908506..3908575)
location: region:3864055-3908575:1
so has part: feature:3864055-3864296:1:exon
so has part: feature:3869664-3869784:1:exon
so has part: feature:3908506-3908575:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3864055-3864296:1:exon

position:3864296:1
position: 3864296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3869664-3869784:1:exon

position:3869664:1
position: 3869664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3869784:1
position: 3869784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3908506-3908575:1:exon

position:3908506:1
position: 3908506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STK10
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: STK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3901277..4031641)
location: region:3901277-4031641:-1
so has part: feature:3901277-4031641:-1:exon
subclass of: SO_0000010

102179238
type: Gene
SIO_000068: ncbigene

position:3901277:-1
position: 3901277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4031641:-1
position: 4031641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3901277-4031641:-1:exon

STK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: STK10
product: serine/threonine kinase 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 29 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_018065487.1
SIO_010081: STK10
subclass of: SO_0000673
so part of: STK10
location: complement(join(3901277..3903670,3908569..3908682,3911282..3911407,3911899..3912087,3914159..3914283,3916181..3916310,3919288..3919380,3930853..3931032,3931711..3931834,3937445..3937575,3939815..3940357,3941995..3942129,3950972..3951053,3951630..3951824,3952755..3952827,3968039..3968188,3975146..3975194,4000784..4000948,4031298..4031641))
location: region:3901277-4031641:-1
so has part: feature:4031298-4031641:-1:exon
so has part: feature:4000784-4000948:-1:exon
so has part: feature:3975146-3975194:-1:exon
so has part: feature:3968039-3968188:-1:exon
so has part: feature:3952755-3952827:-1:exon
so has part: feature:3951630-3951824:-1:exon
so has part: feature:3950972-3951053:-1:exon
so has part: feature:3941995-3942129:-1:exon
so has part: feature:3939815-3940357:-1:exon
so has part: feature:3937445-3937575:-1:exon
so has part: feature:3931711-3931834:-1:exon
so has part: feature:3930853-3931032:-1:exon
so has part: feature:3919288-3919380:-1:exon
so has part: feature:3916181-3916310:-1:exon
so has part: feature:3914159-3914283:-1:exon
so has part: feature:3911899-3912087:-1:exon
so has part: feature:3911282-3911407:-1:exon
so has part: feature:3908569-3908682:-1:exon
so has part: feature:3901277-3903670:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4031298-4031641:-1:exon

position:4031298:-1
position: 4031298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4000784-4000948:-1:exon

position:4000784:-1
position: 4000784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4000948:-1
position: 4000948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3975146-3975194:-1:exon

position:3975146:-1
position: 3975146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3975194:-1
position: 3975194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3968039-3968188:-1:exon

position:3968039:-1
position: 3968039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3968188:-1
position: 3968188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3952755-3952827:-1:exon

position:3952755:-1
position: 3952755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3952827:-1
position: 3952827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3951630-3951824:-1:exon

position:3951630:-1
position: 3951630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3951824:-1
position: 3951824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3950972-3951053:-1:exon

position:3950972:-1
position: 3950972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3951053:-1
position: 3951053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3941995-3942129:-1:exon

position:3941995:-1
position: 3941995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3942129:-1
position: 3942129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3939815-3940357:-1:exon

position:3939815:-1
position: 3939815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3940357:-1
position: 3940357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3937445-3937575:-1:exon

position:3937445:-1
position: 3937445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3937575:-1
position: 3937575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3931711-3931834:-1:exon

position:3931711:-1
position: 3931711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3931834:-1
position: 3931834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3930853-3931032:-1:exon

position:3930853:-1
position: 3930853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3931032:-1
position: 3931032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3919288-3919380:-1:exon

position:3919288:-1
position: 3919288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3919380:-1
position: 3919380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3916181-3916310:-1:exon

position:3916181:-1
position: 3916181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3916310:-1
position: 3916310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3914159-3914283:-1:exon

position:3914159:-1
position: 3914159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3914283:-1
position: 3914283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3911899-3912087:-1:exon

position:3911899:-1
position: 3911899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3912087:-1
position: 3912087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3911282-3911407:-1:exon

position:3911282:-1
position: 3911282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3911407:-1
position: 3911407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3908569-3908682:-1:exon

position:3908569:-1
position: 3908569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3908682:-1
position: 3908682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3901277-3903670:-1:exon

position:3903670:-1
position: 3903670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: STK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 10
translation: MAFANFRRILRLSTFEKRKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETNSEEELEDYIVEIEILATCDHPYIVKLLGAYYYDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALTFLHGKKIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLSPSKWSAEFRDFLKTALDKNPETRPSAAQLLEHPFVSSVTSNKALRELVAEAKAEVMEEIEDGRDEGDEEDAVEAASPLENHTRDSSEVSQLSLDADKLLKESPFTPPPPSQPQDGANGPSESPGDGALPATSPPDVAPGSENGMAVPVPLRKFRPVSMGARIQVSEEKQAADQGGDLSPVASRPQKASQSRPNSSALETLRGELTNGSLELPTPGAQSFSKRDSDCGSVSTSGSTDFGTSLSADLSVNKESGSLSIKDSRLHNKTLKRTRKFVVDGVEVSITTSKIISEDEKKDEEMRFLRRQELRELRLLQKEEHRNQTQLSSKHELQLEQMHKRFEQEVSAKKKFFDIELENLERQQKQQVEKMEQDHAVRRREEAKRIRLEQERDYAKFQEQLKLMKKEVKNEVEKLPRQQRKESMKQKMEEHTQKKQLLDREFVAKQKEDLELAMKRITADNRREICDKERECLTRKQELLRDREAALWEMEEHHLQERHQLVKQQLKDQYFLQRHELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGGSAAEQREKIKQFSQQEEKRQKAERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLLIEHEAQKLKALDESHNQNLKEWRDKLRPRKKALEEDLNQKKREQEMFFKMNEEAEYANPTTPNKVTKFFPYSSADAAS
SIO_010081: STK10
subclass of: SO_0000673
so part of: STK10
location: complement(join(3903527..3903670,3908569..3908682,3911282..3911407,3911899..3912087,3914159..3914283,3916181..3916310,3919288..3919380,3930853..3931032,3931711..3931834,3937445..3937575,3939815..3940357,3941995..3942129,3950972..3951053,3951630..3951824,3952755..3952827,3968039..3968188,3975146..3975194,4000784..4000948,4031298..4031453))
location: region:3903527-4031453:-1
so has part: feature:4031298-4031453:-1:exon
so has part: feature:4000784-4000948:-1:exon
so has part: feature:3975146-3975194:-1:exon
so has part: feature:3968039-3968188:-1:exon
so has part: feature:3952755-3952827:-1:exon
so has part: feature:3951630-3951824:-1:exon
so has part: feature:3950972-3951053:-1:exon
so has part: feature:3941995-3942129:-1:exon
so has part: feature:3939815-3940357:-1:exon
so has part: feature:3937445-3937575:-1:exon
so has part: feature:3931711-3931834:-1:exon
so has part: feature:3930853-3931032:-1:exon
so has part: feature:3919288-3919380:-1:exon
so has part: feature:3916181-3916310:-1:exon
so has part: feature:3914159-3914283:-1:exon
so has part: feature:3911899-3912087:-1:exon
so has part: feature:3911282-3911407:-1:exon
so has part: feature:3908569-3908682:-1:exon
so has part: feature:3903527-3903670:-1:exon

XP_017920976.1
type: Protein
SIO_000068: ncbiprotein

position:3903527:-1
position: 3903527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4031453:-1
position: 4031453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4031298-4031453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4000784-4000948:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3975146-3975194:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3968039-3968188:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3952755-3952827:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3951630-3951824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3950972-3951053:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3941995-3942129:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3939815-3940357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3937445-3937575:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3931711-3931834:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3930853-3931032:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3919288-3919380:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3916181-3916310:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3914159-3914283:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3911899-3912087:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3911282-3911407:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3908569-3908682:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3903527-3903670:-1:exon

LOC102187894
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102187894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4018567..4019519
location: region:4018567-4019519:1
so has part: feature:4018567-4019519:1:exon

102187894
type: Gene
SIO_000068: ncbigene

position:4018567:1
position: 4018567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4019519:1
position: 4019519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4018567-4019519:1:exon

LOC102187894
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102187894
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102187894
subclass of: SO_0000673
so part of: LOC102187894
location: 4018567..4018736
location: region:4018567-4018736:1
so has part: feature:4018567-4018736:1:exon

position:4018736:1
position: 4018736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4018567-4018736:1:exon

LOC102187894
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102187894
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102187894
subclass of: SO_0000673
so part of: LOC102187894
location: 4018888..4019519
location: region:4018888-4019519:1
so has part: feature:4018888-4019519:1:exon

position:4018888:1
position: 4018888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4018888-4019519:1:exon

EFCAB9
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: EFCAB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4042154..4051625
location: region:4042154-4051625:1
so has part: feature:4042154-4051625:1:exon
subclass of: SO_0000010

102188169
type: Gene
SIO_000068: ncbigene

position:4042154:1
position: 4042154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4051625:1
position: 4051625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4042154-4051625:1:exon

EFCAB9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: EFCAB9
product: EF-hand calcium binding domain 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_013972701.2
SIO_010081: EFCAB9
subclass of: SO_0000673
so part of: EFCAB9
location: join(4042154..4042309,4045721..4045869,4046656..4046832,4047998..4048217)
location: region:4042154-4048217:1
so has part: feature:4042154-4042309:1:exon
so has part: feature:4045721-4045869:1:exon
so has part: feature:4046656-4046832:1:exon
so has part: feature:4047998-4048217:1:exon

position:4048217:1
position: 4048217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4042154-4042309:1:exon

position:4042309:1
position: 4042309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4045721-4045869:1:exon

position:4045721:1
position: 4045721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4045869:1
position: 4045869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4046656-4046832:1:exon

position:4046656:1
position: 4046656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4046832:1
position: 4046832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4047998-4048217:1:exon

position:4047998:1
position: 4047998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EFCAB9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: EFCAB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand calcium-binding domain-containing protein 9
translation: MKLKQGSFLWYLYLDKLYCLLSVRNVKALVEYFHLLDVHRKKTLNDVLFYHFLHHVTDLTRNQITVVFNMLDWNAVGEIGFDQFYMLVCILLAQENHLEEQFIFRHSRPVFELLDLDGELKIGPDNLHMYNFLFNIKKQQLRDLYYNFDITGDRLLNYKEFKLFTIFSMDKYQESQKAEKEKKKEKALLKKKLSQVNQSQRESLLGIKPFESISNYNC
SIO_010081: EFCAB9
subclass of: SO_0000673
so part of: EFCAB9
location: join(4042174..4042309,4045721..4045869,4046656..4046832,4047998..4048192)
location: region:4042174-4048192:1
so has part: feature:4042174-4042309:1:exon
so has part: feature:4045721-4045869:1:exon
so has part: feature:4046656-4046832:1:exon
so has part: feature:4047998-4048192:1:exon

XP_013828155.2
type: Protein
SIO_000068: ncbiprotein

position:4042174:1
position: 4042174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4048192:1
position: 4048192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4042174-4042309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4045721-4045869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4046656-4046832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4047998-4048192:1:exon

LOC106503307
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4042300..4046671)
location: region:4042300-4046671:-1
so has part: feature:4042300-4046671:-1:exon
subclass of: SO_0000011

106503307
type: Gene
SIO_000068: ncbigene

position:4042300:-1
position: 4042300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4046671:-1
position: 4046671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4042300-4046671:-1:exon

LOC106503307
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106503307
product: uncharacterized LOC106503307
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_001296948.2
SIO_010081: LOC106503307
subclass of: SO_0000673
so part of: LOC106503307
location: complement(join(4042300..4042740,4044118..4044317,4046306..4046671))
location: region:4042300-4046671:-1
so has part: feature:4046306-4046671:-1:exon
so has part: feature:4044118-4044317:-1:exon
so has part: feature:4042300-4042740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4046306-4046671:-1:exon

position:4046306:-1
position: 4046306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4044118-4044317:-1:exon

position:4044118:-1
position: 4044118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4044317:-1
position: 4044317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4042300-4042740:-1:exon

position:4042740:-1
position: 4042740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFCAB9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9925
gene: EFCAB9
product: EF-hand calcium binding domain 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_001919778.1
SIO_010081: EFCAB9
so part of: EFCAB9
location: join(4044492..4045869,4051272..4051625)
location: region:4044492-4051625:1
so has part: feature:4044492-4045869:1:exon
so has part: feature:4051272-4051625:1:exon

position:4044492:1
position: 4044492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4044492-4045869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4051272-4051625:1:exon

position:4051272:1
position: 4051272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBTD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: UBTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4051788..4113690)
location: region:4051788-4113690:-1
so has part: feature:4051788-4113690:-1:exon
subclass of: SO_0000010

102188441
type: Gene
SIO_000068: ncbigene

position:4051788:-1
position: 4051788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4113690:-1
position: 4113690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4051788-4113690:-1:exon

UBTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: UBTD2
product: ubiquitin domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 20 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_018065496.1
SIO_010081: UBTD2
subclass of: SO_0000673
so part of: UBTD2
location: complement(join(4051788..4054276,4070563..4070799,4113507..4113690))
location: region:4051788-4113690:-1
so has part: feature:4113507-4113690:-1:exon
so has part: feature:4070563-4070799:-1:exon
so has part: feature:4051788-4054276:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4113507-4113690:-1:exon

position:4113507:-1
position: 4113507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4070563-4070799:-1:exon

position:4070563:-1
position: 4070563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4070799:-1
position: 4070799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4051788-4054276:-1:exon

position:4054276:-1
position: 4054276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: UBTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin domain-containing protein 2
translation: MGGCVGAQHDSSGSLNENSEGTGVALGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMIEEKSGTETLDIPEPPPNSGYESQLRLRLSTGKDLKLVVRSTDTVYHMKRRLHAAEGVEPASQRWFFSGRPLTDKMKLEELKIPKDYVVQVIMSQPLQNPTPVEN
SIO_010081: UBTD2
subclass of: SO_0000673
so part of: UBTD2
location: complement(join(4053879..4054276,4070563..4070799,4113507..4113576))
location: region:4053879-4113576:-1
so has part: feature:4113507-4113576:-1:exon
so has part: feature:4070563-4070799:-1:exon
so has part: feature:4053879-4054276:-1:exon

XP_017920985.1
type: Protein
SIO_000068: ncbiprotein

position:4053879:-1
position: 4053879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4113576:-1
position: 4113576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4113507-4113576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4070563-4070799:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4053879-4054276:-1:exon

LOC102188709
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102188709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4121877..4122624
location: region:4121877-4122624:1
so has part: feature:4121877-4122624:1:exon

102188709
type: Gene
SIO_000068: ncbigene

position:4121877:1
position: 4121877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4122624:1
position: 4122624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4121877-4122624:1:exon

LOC102188709
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102188709
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102188709
subclass of: SO_0000673
so part of: LOC102188709
location: 4121877..4122624
location: region:4121877-4122624:1
so has part: feature:4121877-4122624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4121877-4122624:1:exon

SH3PXD2B
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SH3PXD2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4151426..4273866)
location: region:4151426-4273866:-1
so has part: feature:4151426-4273866:-1:exon
subclass of: SO_0000010

102179520
type: Gene
SIO_000068: ncbigene

position:4151426:-1
position: 4151426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4273866:-1
position: 4273866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4151426-4273866:-1:exon

SH3PXD2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SH3PXD2B
product: SH3 and PX domains 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_018065558.1
SIO_010081: SH3PXD2B
subclass of: SO_0000673
so part of: SH3PXD2B
location: complement(join(4151426..4157855,4171035..4171160,4172042..4172091,4173679..4173905,4176938..4177055,4181824..4181928,4187695..4187829,4195670..4195695,4203380..4203471,4215452..4215528,4222590..4222665,4239159..4239239,4273655..4273866))
location: region:4151426-4273866:-1
so has part: feature:4273655-4273866:-1:exon
so has part: feature:4239159-4239239:-1:exon
so has part: feature:4222590-4222665:-1:exon
so has part: feature:4215452-4215528:-1:exon
so has part: feature:4203380-4203471:-1:exon
so has part: feature:4195670-4195695:-1:exon
so has part: feature:4187695-4187829:-1:exon
so has part: feature:4181824-4181928:-1:exon
so has part: feature:4176938-4177055:-1:exon
so has part: feature:4173679-4173905:-1:exon
so has part: feature:4172042-4172091:-1:exon
so has part: feature:4171035-4171160:-1:exon
so has part: feature:4151426-4157855:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4273655-4273866:-1:exon

position:4273655:-1
position: 4273655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4239159-4239239:-1:exon

position:4239159:-1
position: 4239159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4239239:-1
position: 4239239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4222590-4222665:-1:exon

position:4222590:-1
position: 4222590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4222665:-1
position: 4222665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4215452-4215528:-1:exon

position:4215452:-1
position: 4215452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4215528:-1
position: 4215528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4203380-4203471:-1:exon

position:4203380:-1
position: 4203380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4203471:-1
position: 4203471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4195670-4195695:-1:exon

position:4195670:-1
position: 4195670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4195695:-1
position: 4195695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4187695-4187829:-1:exon

position:4187695:-1
position: 4187695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4187829:-1
position: 4187829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4181824-4181928:-1:exon

position:4181824:-1
position: 4181824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4181928:-1
position: 4181928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4176938-4177055:-1:exon

position:4176938:-1
position: 4176938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4177055:-1
position: 4177055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4173679-4173905:-1:exon

position:4173679:-1
position: 4173679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4173905:-1
position: 4173905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4172042-4172091:-1:exon

position:4172042:-1
position: 4172042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4172091:-1
position: 4172091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4171035-4171160:-1:exon

position:4171035:-1
position: 4171035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4171160:-1
position: 4171160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4151426-4157855:-1:exon

position:4157855:-1
position: 4157855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH3PXD2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SH3PXD2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 and PX domain-containing protein 2B
translation: MPPRRSIVEVKVLDVQKRRVPNKHYVYIIRVTWSSGSTEAIYRRYSRFFDLQMQMLDKFPMEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALIQLPPYISQCDEVLQFFETRPEDLNPPKEEHVGKKKSGGDLTSVDPMVLEQYVVVADYQKQESSEISLSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPYTARDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLRKSSGEPLPSKLGPGSPAHVGVLELDGVSRQQNSVGREKELLNNQRDGRIEGRPAPDSDIKQRSPKMRQRPPPRRDMTIPRGLNLPKPPIPPQVEEEYYTIAEFQTTIPDGISFQAGLKVEVIEKNLSGWWYIQIEDKEGWAPATFIDKYKKTSNASRPNFLAPLPNEVAQLRLGDAAATENSSGGEAGGPSRPLPDAPHGAGDSGTPWAKDWKGGKEMLRKASSDTSSCAGYEEISDPDLEEKPSLPPRKESIIKSEGELQERQRMEQFRGSSPKPPGVILPMIPAKHAPPARDSRKAEPKPEKSKLFQPKNETGLECGHRVLAKEVKKPSLRPVSRSKVGPPEEKPEAVPQNLFLKSKPQVRPKPAPSPRTEPPQGEDPVDICNLRSKLRPAKSQEKASVDGESSLQAGGGQDGAFSRGFPPGEGPGRAQDRTSKQEGPSPKEAPCRAPPRPAKTADPVPKGAPVPLQEASLQRPVVPPRRPPPPKKTSSSSRPLPEVRGPPPEVRGPLPEVRGPLPEVRGPQRESSEGKAAPAPGRALLVPPKAKPFLSNSSGGQDDMRGKGGLGPRMMGKTGENKEKVAAGSFPSTDGPKDLYVAVANFEGDQDTSGFQEGTVFEVREKNSSGWWFCQVQSGAPSWEGWIPSNYLRKKP
SIO_010081: SH3PXD2B
subclass of: SO_0000673
so part of: SH3PXD2B
location: complement(join(4156257..4157855,4171035..4171160,4172042..4172091,4173679..4173905,4176938..4177055,4181824..4181928,4187695..4187829,4195670..4195695,4203380..4203471,4215452..4215528,4222590..4222665,4239159..4239239,4273655..4273729))
location: region:4156257-4273729:-1
so has part: feature:4273655-4273729:-1:exon
so has part: feature:4239159-4239239:-1:exon
so has part: feature:4222590-4222665:-1:exon
so has part: feature:4215452-4215528:-1:exon
so has part: feature:4203380-4203471:-1:exon
so has part: feature:4195670-4195695:-1:exon
so has part: feature:4187695-4187829:-1:exon
so has part: feature:4181824-4181928:-1:exon
so has part: feature:4176938-4177055:-1:exon
so has part: feature:4173679-4173905:-1:exon
so has part: feature:4172042-4172091:-1:exon
so has part: feature:4171035-4171160:-1:exon
so has part: feature:4156257-4157855:-1:exon

XP_017921047.1
type: Protein
SIO_000068: ncbiprotein

position:4156257:-1
position: 4156257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4273729:-1
position: 4273729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4273655-4273729:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4239159-4239239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4222590-4222665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4215452-4215528:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4203380-4203471:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4195670-4195695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4187695-4187829:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4181824-4181928:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4176938-4177055:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4173679-4173905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4172042-4172091:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4171035-4171160:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4156257-4157855:-1:exon

NEURL1B
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: NEURL1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4469264..4514148
location: region:4469264-4514148:1
so has part: feature:4469264-4514148:1:exon
subclass of: SO_0000010

102179812
type: Gene
SIO_000068: ncbigene

position:4469264:1
position: 4469264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4514148:1
position: 4514148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4469264-4514148:1:exon

NEURL1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NEURL1B
product: neuralized E3 ubiquitin protein ligase 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 57 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_018065684.1
SIO_010081: NEURL1B
subclass of: SO_0000673
so part of: NEURL1B
location: join(4469264..4469445,4491179..4491724,4505943..4506662,4508961..4509086,4509403..4514148)
location: region:4469264-4514148:1
so has part: feature:4469264-4469445:1:exon
so has part: feature:4491179-4491724:1:exon
so has part: feature:4505943-4506662:1:exon
so has part: feature:4508961-4509086:1:exon
so has part: feature:4509403-4514148:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4469264-4469445:1:exon

position:4469445:1
position: 4469445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4491179-4491724:1:exon

position:4491179:1
position: 4491179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4491724:1
position: 4491724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4505943-4506662:1:exon

position:4505943:1
position: 4505943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4506662:1
position: 4506662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4508961-4509086:1:exon

position:4508961:1
position: 4508961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4509086:1
position: 4509086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4509403-4514148:1:exon

position:4509403:1
position: 4509403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NEURL1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NEURL1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase NEURL1B
translation: MGNTVHRTLPESSPPARLLATRPCCGPGPERRPVLGEAPRFHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFGFTAHDPSLMSAQDIPKYACPDLVTRPGYWAKALPENLALRDTVLAYWADRHGRVFYSVNDGEPVLFHCGVAVGGPLWALIDVYGITDEVQLLESGFADTLTPARLGQARFSACLPPSSHDAANFDNNELENNQVVAKLGHLALGRAPGPAPADHAAAAIPCGPRERQRPSSSPALLEADLRFHATRGPDVSLSLDRKVACAPRPDGGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFGITSCDPGGLRPAELPADPDALIDRKEYWVVARAGPVPSGGDALSFTLRPGGDVLLGVNGRPRGRLLCVDTTQALWAFFAVRGGAAGQLRLLGTLQSSPATTSPSGSLSGSQDDSDSDMAFSVNQSSSASESSLVTAPSSPLSPPVSPMSSPPELGGGKSSECTVCFDGEVDTVIYTCGHMCLCHGCGLRLKRQARACCPICRRPIKDVIKTYRP
SIO_010081: NEURL1B
subclass of: SO_0000673
so part of: NEURL1B
location: join(4469415..4469445,4491179..4491724,4505943..4506662,4508961..4509086,4509403..4509647)
location: region:4469415-4509647:1
so has part: feature:4469415-4469445:1:exon
so has part: feature:4491179-4491724:1:exon
so has part: feature:4505943-4506662:1:exon
so has part: feature:4508961-4509086:1:exon
so has part: feature:4509403-4509647:1:exon

XP_017921173.1
type: Protein
SIO_000068: ncbiprotein

position:4469415:1
position: 4469415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4509647:1
position: 4509647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4469415-4469445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4491179-4491724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4505943-4506662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4508961-4509086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4509403-4509647:1:exon

DUSP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: DUSP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4601973..4605128)
location: region:4601973-4605128:-1
so has part: feature:4601973-4605128:-1:exon
subclass of: SO_0000010

102180080
type: Gene
SIO_000068: ncbigene

position:4601973:-1
position: 4601973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4605128:-1
position: 4605128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4601973-4605128:-1:exon

DUSP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: DUSP1
product: dual specificity phosphatase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 216 ESTs, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_018065720.1
SIO_010081: DUSP1
subclass of: SO_0000673
so part of: DUSP1
location: complement(join(4601973..4603024,4603455..4603674,4604038..4604183,4604460..4605128))
location: region:4601973-4605128:-1
so has part: feature:4604460-4605128:-1:exon
so has part: feature:4604038-4604183:-1:exon
so has part: feature:4603455-4603674:-1:exon
so has part: feature:4601973-4603024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4604460-4605128:-1:exon

position:4604460:-1
position: 4604460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4604038-4604183:-1:exon

position:4604038:-1
position: 4604038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4604183:-1
position: 4604183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4603455-4603674:-1:exon

position:4603455:-1
position: 4603455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4603674:-1
position: 4603674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4601973-4603024:-1:exon

position:4603024:-1
position: 4603024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DUSP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: DUSP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 1
translation: MVMEVVSLDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHIVPNAELRGRLLAGAYHAVVLLDERSAALDCAKRDGTLALAAGALCREARSAQIFLLKGGYEAFSASYPELCSKQSTPMGLSLPLSTSVPDSAESGCSSCSTPLYDQGGPVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQVLAPHCSAEAGSPAMAVLDCSTSTTTVFNFPVSIPVHPTNSALSYLQSPITTSPSC
SIO_010081: DUSP1
subclass of: SO_0000673
so part of: DUSP1
location: complement(join(4602654..4603024,4603455..4603674,4604038..4604183,4604460..4604826))
location: region:4602654-4604826:-1
so has part: feature:4604460-4604826:-1:exon
so has part: feature:4604038-4604183:-1:exon
so has part: feature:4603455-4603674:-1:exon
so has part: feature:4602654-4603024:-1:exon

XP_017921209.1
type: Protein
SIO_000068: ncbiprotein

position:4602654:-1
position: 4602654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4604826:-1
position: 4604826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4604460-4604826:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4604038-4604183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4603455-4603674:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4602654-4603024:-1:exon

LOC108638392
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108638392
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4634588..4646409
location: region:4634588-4646409:1
so has part: feature:4634588-4646409:1:exon
subclass of: SO_0000011

108638392
type: Gene
SIO_000068: ncbigene

position:4634588:1
position: 4634588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4646409:1
position: 4646409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4634588-4646409:1:exon

LOC108638392
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108638392
product: uncharacterized LOC108638392
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001919776.1
SIO_010081: LOC108638392
subclass of: SO_0000673
so part of: LOC108638392
location: join(4634588..4634682,4640350..4640477,4643467..4643639,4644609..4644729,4645682..4646409)
location: region:4634588-4646409:1
so has part: feature:4634588-4634682:1:exon
so has part: feature:4640350-4640477:1:exon
so has part: feature:4643467-4643639:1:exon
so has part: feature:4644609-4644729:1:exon
so has part: feature:4645682-4646409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4634588-4634682:1:exon

position:4634682:1
position: 4634682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4640350-4640477:1:exon

position:4640350:1
position: 4640350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4640477:1
position: 4640477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4643467-4643639:1:exon

position:4643467:1
position: 4643467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4643639:1
position: 4643639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4644609-4644729:1:exon

position:4644609:1
position: 4644609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4644729:1
position: 4644729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4645682-4646409:1:exon

position:4645682:1
position: 4645682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERGIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ERGIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4656479..4772974
location: region:4656479-4772974:1
so has part: feature:4656479-4772974:1:exon
subclass of: SO_0000010

102188977
type: Gene
SIO_000068: ncbigene

position:4656479:1
position: 4656479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4772974:1
position: 4772974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4656479-4772974:1:exon

ERGIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ERGIC1
product: endoplasmic reticulum-golgi intermediate compartment 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 70 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_018065547.1
SIO_010081: ERGIC1
subclass of: SO_0000673
so part of: ERGIC1
location: join(4656479..4656628,4709796..4709857,4716697..4716769,4727181..4727275,4731887..4732011,4745563..4745667,4752722..4752782,4757312..4757412,4760144..4760266,4771085..4772974)
location: region:4656479-4772974:1
so has part: feature:4656479-4656628:1:exon
so has part: feature:4709796-4709857:1:exon
so has part: feature:4716697-4716769:1:exon
so has part: feature:4727181-4727275:1:exon
so has part: feature:4731887-4732011:1:exon
so has part: feature:4745563-4745667:1:exon
so has part: feature:4752722-4752782:1:exon
so has part: feature:4757312-4757412:1:exon
so has part: feature:4760144-4760266:1:exon
so has part: feature:4771085-4772974:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4656479-4656628:1:exon

position:4656628:1
position: 4656628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4709796-4709857:1:exon

position:4709796:1
position: 4709796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4709857:1
position: 4709857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4716697-4716769:1:exon

position:4716697:1
position: 4716697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4716769:1
position: 4716769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4727181-4727275:1:exon

position:4727181:1
position: 4727181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4727275:1
position: 4727275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4731887-4732011:1:exon

position:4731887:1
position: 4731887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4732011:1
position: 4732011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4745563-4745667:1:exon

position:4745563:1
position: 4745563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4745667:1
position: 4745667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4752722-4752782:1:exon

position:4752722:1
position: 4752722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4752782:1
position: 4752782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4757312-4757412:1:exon

position:4757312:1
position: 4757312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4757412:1
position: 4757412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4760144-4760266:1:exon

position:4760144:1
position: 4760144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4760266:1
position: 4760266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4771085-4772974:1:exon

position:4771085:1
position: 4771085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERGIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ERGIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum-Golgi intermediate compartment protein 1 isoform X2
translation: MPFDFRRFDIYRKVPKDLTQPTYTGAIISVCCCLFILFLFLSELTGFITTEIVNELYVDDPDKDSGGKIDVSLNISLPNLHCELVGLDIQDEMGRHEVGHIDNSMKIPLNNGVGCRFEGQFSINKVPGNFHVSTHSATAQPQNPDMTHVIHKLSFGDTLQVHNVHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVANKEYVAYSHTGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCIFTASEAWKKIQLGKMH
SIO_010081: ERGIC1
subclass of: SO_0000673
so part of: ERGIC1
location: join(4656609..4656628,4709796..4709857,4716697..4716769,4727181..4727275,4731887..4732011,4745563..4745667,4752722..4752782,4757312..4757412,4760144..4760266,4771085..4771192)
location: region:4656609-4771192:1
so has part: feature:4656609-4656628:1:exon
so has part: feature:4709796-4709857:1:exon
so has part: feature:4716697-4716769:1:exon
so has part: feature:4727181-4727275:1:exon
so has part: feature:4731887-4732011:1:exon
so has part: feature:4745563-4745667:1:exon
so has part: feature:4752722-4752782:1:exon
so has part: feature:4757312-4757412:1:exon
so has part: feature:4760144-4760266:1:exon
so has part: feature:4771085-4771192:1:exon

XP_017921036.1
type: Protein
SIO_000068: ncbiprotein

position:4656609:1
position: 4656609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4771192:1
position: 4771192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4656609-4656628:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4709796-4709857:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4716697-4716769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4727181-4727275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4731887-4732011:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4745563-4745667:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4752722-4752782:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4757312-4757412:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4760144-4760266:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4771085-4771192:1:exon

ERGIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ERGIC1
product: endoplasmic reticulum-golgi intermediate compartment 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_013972670.2
SIO_010081: ERGIC1
subclass of: SO_0000673
so part of: ERGIC1
location: join(4678435..4678499,4709796..4709857,4716697..4716769,4727181..4727275,4731887..4732011,4745563..4745667,4752722..4752782,4757312..4757412,4760144..4760266,4771085..4772974)
location: region:4678435-4772974:1
so has part: feature:4678435-4678499:1:exon
so has part: feature:4709796-4709857:1:exon
so has part: feature:4716697-4716769:1:exon
so has part: feature:4727181-4727275:1:exon
so has part: feature:4731887-4732011:1:exon
so has part: feature:4745563-4745667:1:exon
so has part: feature:4752722-4752782:1:exon
so has part: feature:4757312-4757412:1:exon
so has part: feature:4760144-4760266:1:exon
so has part: feature:4771085-4772974:1:exon

position:4678435:1
position: 4678435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4678435-4678499:1:exon

position:4678499:1
position: 4678499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4709796-4709857:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4716697-4716769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4727181-4727275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4731887-4732011:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4745563-4745667:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4752722-4752782:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4757312-4757412:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4760144-4760266:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4771085-4772974:1:exon

ERGIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ERGIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum-Golgi intermediate compartment protein 1 isoform X1
translation: MACGQEGTGQHLRPENKFDIYRKVPKDLTQPTYTGAIISVCCCLFILFLFLSELTGFITTEIVNELYVDDPDKDSGGKIDVSLNISLPNLHCELVGLDIQDEMGRHEVGHIDNSMKIPLNNGVGCRFEGQFSINKVPGNFHVSTHSATAQPQNPDMTHVIHKLSFGDTLQVHNVHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVANKEYVAYSHTGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCIFTASEAWKKIQLGKMH
SIO_010081: ERGIC1
subclass of: SO_0000673
so part of: ERGIC1
location: join(4678450..4678499,4709796..4709857,4716697..4716769,4727181..4727275,4731887..4732011,4745563..4745667,4752722..4752782,4757312..4757412,4760144..4760266,4771085..4771192)
location: region:4678450-4771192:1
so has part: feature:4678450-4678499:1:exon
so has part: feature:4709796-4709857:1:exon
so has part: feature:4716697-4716769:1:exon
so has part: feature:4727181-4727275:1:exon
so has part: feature:4731887-4732011:1:exon
so has part: feature:4745563-4745667:1:exon
so has part: feature:4752722-4752782:1:exon
so has part: feature:4757312-4757412:1:exon
so has part: feature:4760144-4760266:1:exon
so has part: feature:4771085-4771192:1:exon

XP_013828124.1
type: Protein
SIO_000068: ncbiprotein

position:4678450:1
position: 4678450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4678450-4678499:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4709796-4709857:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4716697-4716769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4727181-4727275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4731887-4732011:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4745563-4745667:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4752722-4752782:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4757312-4757412:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4760144-4760266:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4771085-4771192:1:exon

RPL26L1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: RPL26L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4780897..4787436
location: region:4780897-4787436:1
so has part: feature:4780897-4787436:1:exon
subclass of: SO_0000010

102189623
type: Gene
SIO_000068: ncbigene

position:4780897:1
position: 4780897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4787436:1
position: 4787436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4780897-4787436:1:exon

RPL26L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RPL26L1
product: ribosomal protein L26 like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 4 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_005694533.3
SIO_010081: RPL26L1
subclass of: SO_0000673
so part of: RPL26L1
location: join(4780897..4781018,4781413..4781589,4786270..4786410,4787130..4787436)
location: region:4780897-4787436:1
so has part: feature:4780897-4781018:1:exon
so has part: feature:4781413-4781589:1:exon
so has part: feature:4786270-4786410:1:exon
so has part: feature:4787130-4787436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4780897-4781018:1:exon

position:4781018:1
position: 4781018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4781413-4781589:1:exon

position:4781413:1
position: 4781413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4781589:1
position: 4781589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4786270-4786410:1:exon

position:4786270:1
position: 4786270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4786410:1
position: 4786410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4787130-4787436:1:exon

position:4787130:1
position: 4787130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL26L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RPL26L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L26-like 1
translation: MGMEHCFLSALAQQEILTSVPTRAPSELGGRSTNTMKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEELIEKMQE
SIO_010081: RPL26L1
subclass of: SO_0000673
so part of: RPL26L1
location: join(4780923..4781018,4781413..4781589,4786270..4786410,4787130..4787258)
location: region:4780923-4787258:1
so has part: feature:4780923-4781018:1:exon
so has part: feature:4781413-4781589:1:exon
so has part: feature:4786270-4786410:1:exon
so has part: feature:4787130-4787258:1:exon

XP_005694590.1
type: Protein
SIO_000068: ncbiprotein

position:4780923:1
position: 4780923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4787258:1
position: 4787258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4780923-4781018:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4781413-4781589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4786270-4786410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4787130-4787258:1:exon

ATP6V0E1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ATP6V0E1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4794789..4823044
location: region:4794789-4823044:1
so has part: feature:4794789-4823044:1:exon
subclass of: SO_0000010

102189904
type: Gene
SIO_000068: ncbigene

position:4794789:1
position: 4794789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4823044:1
position: 4823044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4794789-4823044:1:exon

ATP6V0E1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ATP6V0E1
product: ATPase H+ transporting V0 subunit e1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 19 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_005694534.2
SIO_010081: ATP6V0E1
subclass of: SO_0000673
so part of: ATP6V0E1
location: join(4794789..4794983,4799677..4799724,4814566..4814695,4822552..4823044)
location: region:4794789-4823044:1
so has part: feature:4794789-4794983:1:exon
so has part: feature:4799677-4799724:1:exon
so has part: feature:4814566-4814695:1:exon
so has part: feature:4822552-4823044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4794789-4794983:1:exon

position:4794983:1
position: 4794983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4799677-4799724:1:exon

position:4799677:1
position: 4799677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4799724:1
position: 4799724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4814566-4814695:1:exon

position:4814566:1
position: 4814566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4814695:1
position: 4814695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4822552-4823044:1:exon

position:4822552:1
position: 4822552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP6V0E1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ATP6V0E1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit e 1
translation: MAYTGLTVPLIVMSVFWGIVGFLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYHWP
SIO_010081: ATP6V0E1
subclass of: SO_0000673
so part of: ATP6V0E1
location: join(4794880..4794983,4799677..4799724,4814566..4814659)
location: region:4794880-4814659:1
so has part: feature:4794880-4794983:1:exon
so has part: feature:4799677-4799724:1:exon
so has part: feature:4814566-4814659:1:exon

XP_005694591.1
type: Protein
SIO_000068: ncbiprotein

position:4794880:1
position: 4794880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4814659:1
position: 4814659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4794880-4794983:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4799677-4799724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4814566-4814659:1:exon

CREBRF
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CREBRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4835893..4894343
location: region:4835893-4894343:1
so has part: feature:4835893-4894343:1:exon
subclass of: SO_0000010

102190172
type: Gene
SIO_000068: ncbigene

position:4835893:1
position: 4835893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4894343:1
position: 4894343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4835893-4894343:1:exon

CREBRF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CREBRF
product: CREB3 regulatory factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 67 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005694535.3
SIO_010081: CREBRF
subclass of: SO_0000673
so part of: CREBRF
location: join(4835893..4836061,4859396..4859591,4861871..4861996,4863433..4864519,4870710..4870904,4872771..4872960,4874387..4874460,4881869..4881991,4888685..4894343)
location: region:4835893-4894343:1
so has part: feature:4835893-4836061:1:exon
so has part: feature:4859396-4859591:1:exon
so has part: feature:4861871-4861996:1:exon
so has part: feature:4863433-4864519:1:exon
so has part: feature:4870710-4870904:1:exon
so has part: feature:4872771-4872960:1:exon
so has part: feature:4874387-4874460:1:exon
so has part: feature:4881869-4881991:1:exon
so has part: feature:4888685-4894343:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4835893-4836061:1:exon

position:4836061:1
position: 4836061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4859396-4859591:1:exon

position:4859396:1
position: 4859396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4859591:1
position: 4859591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4861871-4861996:1:exon

position:4861871:1
position: 4861871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4861996:1
position: 4861996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4863433-4864519:1:exon

position:4863433:1
position: 4863433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4864519:1
position: 4864519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4870710-4870904:1:exon

position:4870710:1
position: 4870710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4870904:1
position: 4870904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4872771-4872960:1:exon

position:4872771:1
position: 4872771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4872960:1
position: 4872960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4874387-4874460:1:exon

position:4874387:1
position: 4874387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4874460:1
position: 4874460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4881869-4881991:1:exon

position:4881869:1
position: 4881869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4881991:1
position: 4881991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4888685-4894343:1:exon

position:4888685:1
position: 4888685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CREBRF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CREBRF
product: CREB3 regulatory factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018065597.1
SIO_010081: CREBRF
subclass of: SO_0000673
so part of: CREBRF
location: join(4836911..4837602,4859396..4859591,4861871..4861996,4863433..4864519,4870710..4870904,4872771..4872960,4874387..4874460,4881869..4881991,4888685..4889594)
location: region:4836911-4889594:1
so has part: feature:4836911-4837602:1:exon
so has part: feature:4859396-4859591:1:exon
so has part: feature:4861871-4861996:1:exon
so has part: feature:4863433-4864519:1:exon
so has part: feature:4870710-4870904:1:exon
so has part: feature:4872771-4872960:1:exon
so has part: feature:4874387-4874460:1:exon
so has part: feature:4881869-4881991:1:exon
so has part: feature:4888685-4889594:1:exon

position:4836911:1
position: 4836911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4889594:1
position: 4889594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4836911-4837602:1:exon

position:4837602:1
position: 4837602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4859396-4859591:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4861871-4861996:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4863433-4864519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4870710-4870904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4872771-4872960:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4874387-4874460:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4881869-4881991:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4888685-4889594:1:exon

CREBRF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CREBRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB3 regulatory factor
translation: MPQPSVSGMDPPFGDAFRSHTFSEQTLMSTDLLANSSDPDFMYELDREMNYQQNPRDNFLSLEDCKDIENLESFTDVLDNEGTLTSNWEQWDTYCEDLTKYTKLTSCDIWGTKEVDYLGLDDFSSPYQDEEVISKTPTLAQLNSEDSQSVSDSLYYPDSLFSVKQNPLASSFPGKKITSRAAAPVCSSKALQAEVPLSDCVQKASKPTSSTQIMVKTNMYHNEKVNFHVECKDYVKKAKVKINPVQQSRPLLSQVHADAAKENTCYCGAVAKRPEKRGTEPLQGHATPALPFKEAQELLLSPLPQEGPGSVAAGESSSLSASTSVSDSSQKKEEHNYSLFVSDNLGEQPTKCSPEEDEEDEEDVDDEDHDEGFGSEHELSENEEEEEEEEDYEDDKDDDISDTFSEPGYENDSVEDLKEMTSITSRKRGKRRYFWEYSEQLTPSQQERMLRPSEWNRETLPSNMYQKNGLHHGKYAVKKSRRTDVEDLTPNPKKLLQIGNELRKLNKVISDLTPVSELPLTARPRSRKEKNKLASRACRLKKKAQYEANKVKLWGLNTEYDNLLFVINSIKQEIVNRVQNPREERGPNMGQKLEILIKDTLGLPVAGQTSEFVNQVLEKTAEGNPTGGLVGLRIPTSKV
SIO_010081: CREBRF
subclass of: SO_0000673
so part of: CREBRF
location: join(4859583..4859591,4861871..4861996,4863433..4864519,4870710..4870904,4872771..4872960,4874387..4874460,4881869..4881991,4888685..4888800)
location: region:4859583-4888800:1
so has part: feature:4859583-4859591:1:exon
so has part: feature:4861871-4861996:1:exon
so has part: feature:4863433-4864519:1:exon
so has part: feature:4870710-4870904:1:exon
so has part: feature:4872771-4872960:1:exon
so has part: feature:4874387-4874460:1:exon
so has part: feature:4881869-4881991:1:exon
so has part: feature:4888685-4888800:1:exon

XP_017921086.1
type: Protein
SIO_000068: ncbiprotein

position:4859583:1
position: 4859583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4888800:1
position: 4888800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4859583-4859591:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4861871-4861996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4863433-4864519:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4870710-4870904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4872771-4872960:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4874387-4874460:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4881869-4881991:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4888685-4888800:1:exon

CREBRF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CREBRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB3 regulatory factor
translation: MPQPSVSGMDPPFGDAFRSHTFSEQTLMSTDLLANSSDPDFMYELDREMNYQQNPRDNFLSLEDCKDIENLESFTDVLDNEGTLTSNWEQWDTYCEDLTKYTKLTSCDIWGTKEVDYLGLDDFSSPYQDEEVISKTPTLAQLNSEDSQSVSDSLYYPDSLFSVKQNPLASSFPGKKITSRAAAPVCSSKALQAEVPLSDCVQKASKPTSSTQIMVKTNMYHNEKVNFHVECKDYVKKAKVKINPVQQSRPLLSQVHADAAKENTCYCGAVAKRPEKRGTEPLQGHATPALPFKEAQELLLSPLPQEGPGSVAAGESSSLSASTSVSDSSQKKEEHNYSLFVSDNLGEQPTKCSPEEDEEDEEDVDDEDHDEGFGSEHELSENEEEEEEEEDYEDDKDDDISDTFSEPGYENDSVEDLKEMTSITSRKRGKRRYFWEYSEQLTPSQQERMLRPSEWNRETLPSNMYQKNGLHHGKYAVKKSRRTDVEDLTPNPKKLLQIGNELRKLNKVISDLTPVSELPLTARPRSRKEKNKLASRACRLKKKAQYEANKVKLWGLNTEYDNLLFVINSIKQEIVNRVQNPREERGPNMGQKLEILIKDTLGLPVAGQTSEFVNQVLEKTAEGNPTGGLVGLRIPTSKV
SIO_010081: CREBRF
subclass of: SO_0000673
so part of: CREBRF
location: join(4859583..4859591,4861871..4861996,4863433..4864519,4870710..4870904,4872771..4872960,4874387..4874460,4881869..4881991,4888685..4888800)
location: region:4859583-4888800:1
so has part: feature:4859583-4859591:1:exon
so has part: feature:4861871-4861996:1:exon
so has part: feature:4863433-4864519:1:exon
so has part: feature:4870710-4870904:1:exon
so has part: feature:4872771-4872960:1:exon
so has part: feature:4874387-4874460:1:exon
so has part: feature:4881869-4881991:1:exon
so has part: feature:4888685-4888800:1:exon

XP_005694592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4859583-4859591:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4861871-4861996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4863433-4864519:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4870710-4870904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4872771-4872960:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4874387-4874460:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4881869-4881991:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4888685-4888800:1:exon

BNIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: BNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4898540..4908602
location: region:4898540-4908602:1
so has part: feature:4898540-4908602:1:exon
subclass of: SO_0000010

102190640
type: Gene
SIO_000068: ncbigene

position:4898540:1
position: 4898540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4908602:1
position: 4908602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4898540-4908602:1:exon

BNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: BNIP1
product: BCL2 interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 17 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_005694537.2
SIO_010081: BNIP1
subclass of: SO_0000673
so part of: BNIP1
location: join(4898540..4898724,4900874..4900966,4902204..4902295,4903115..4903216,4904855..4904973,4908035..4908602)
location: region:4898540-4908602:1
so has part: feature:4898540-4898724:1:exon
so has part: feature:4900874-4900966:1:exon
so has part: feature:4902204-4902295:1:exon
so has part: feature:4903115-4903216:1:exon
so has part: feature:4904855-4904973:1:exon
so has part: feature:4908035-4908602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4898540-4898724:1:exon

position:4898724:1
position: 4898724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4900874-4900966:1:exon

position:4900874:1
position: 4900874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4900966:1
position: 4900966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4902204-4902295:1:exon

position:4902204:1
position: 4902204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4902295:1
position: 4902295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4903115-4903216:1:exon

position:4903115:1
position: 4903115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4903216:1
position: 4903216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4904855-4904973:1:exon

position:4904855:1
position: 4904855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4904973:1
position: 4904973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4908035-4908602:1:exon

position:4908035:1
position: 4908035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: BNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport protein SEC20
translation: MAAAQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQELEQSAKEQDRESEKQVLLQEVENHKKQMLSNQTSWRKANLTCKIAIDNLEKAELLQGGDLFRQRKTAKESLAQTSSAITESLMGISRMMSQQVQQSEEAMQTLVNSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYILKKRLFPFL
SIO_010081: BNIP1
subclass of: SO_0000673
so part of: BNIP1
location: join(4898641..4898724,4900874..4900966,4902204..4902295,4903115..4903216,4904855..4904973,4908035..4908231)
location: region:4898641-4908231:1
so has part: feature:4898641-4898724:1:exon
so has part: feature:4900874-4900966:1:exon
so has part: feature:4902204-4902295:1:exon
so has part: feature:4903115-4903216:1:exon
so has part: feature:4904855-4904973:1:exon
so has part: feature:4908035-4908231:1:exon

XP_005694594.1
type: Protein
SIO_000068: ncbiprotein

position:4898641:1
position: 4898641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4908231:1
position: 4908231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4898641-4898724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4900874-4900966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4902204-4902295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4903115-4903216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4904855-4904973:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4908035-4908231:1:exon

LOC106503300
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503300
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4926854..4927359
location: region:4926854-4927359:1
so has part: feature:4926854-4927359:1:exon

106503300
type: Gene
SIO_000068: ncbigene

position:4926854:1
position: 4926854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4927359:1
position: 4927359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4926854-4927359:1:exon

LOC106503300
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC106503300
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC106503300
subclass of: SO_0000673
so part of: LOC106503300
location: 4926854..4927359
location: region:4926854-4927359:1
so has part: feature:4926854-4927359:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4926854-4927359:1:exon

NKX2-5
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: NKX2-5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4963294..4966246)
location: region:4963294-4966246:-1
so has part: feature:4963294-4966246:-1:exon
subclass of: SO_0000010

102180349
type: Gene
SIO_000068: ncbigene

position:4963294:-1
position: 4963294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4966246:-1
position: 4966246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4963294-4966246:-1:exon

NKX2-5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NKX2-5
product: NK2 homeobox 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 6 Proteins
transcript id: XM_013972667.2
SIO_010081: NKX2-5
subclass of: SO_0000673
so part of: NKX2-5
location: complement(join(4963294..4964226,4965740..4966246))
location: region:4963294-4966246:-1
so has part: feature:4965740-4966246:-1:exon
so has part: feature:4963294-4964226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4965740-4966246:-1:exon

position:4965740:-1
position: 4965740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4963294-4964226:-1:exon

position:4964226:-1
position: 4964226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NKX2-5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NKX2-5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-2.5
translation: MFPSPALTPTPFSVKDILNLEQQQRSLAAGELSARLEATLAPASCMLAAFKPEAYAGPEAAAPSFPELRAELGPAPSPAKCAPAFSAAPAFYPRAYGDPDPAKDHRADKKELCALQKAVELEKPEPDSAERPRARRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLELVGLPPPPPPPARRIAVPVLVRDGKPCLGDSAPYAPAYGVGLNAYGYNAYPAYPGYGGAACSPGYSCTAAYPAGPPPTQTATAAANNNFVNFGVGDLNAVQSSGIPQGNSGVSTLHGIRAW
SIO_010081: NKX2-5
subclass of: SO_0000673
so part of: NKX2-5
location: complement(join(4963586..4964226,4965740..4966070))
location: region:4963586-4966070:-1
so has part: feature:4965740-4966070:-1:exon
so has part: feature:4963586-4964226:-1:exon

XP_013828121.2
type: Protein
SIO_000068: ncbiprotein

position:4963586:-1
position: 4963586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4966070:-1
position: 4966070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4965740-4966070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4963586-4964226:-1:exon

STC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: STC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5050392..5064919)
location: region:5050392-5064919:-1
so has part: feature:5050392-5064919:-1:exon
subclass of: SO_0000010

102191082
type: Gene
SIO_000068: ncbigene

position:5050392:-1
position: 5050392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5064919:-1
position: 5064919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5050392-5064919:-1:exon

STC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: STC2
product: stanniocalcin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005694539.3
SIO_010081: STC2
subclass of: SO_0000673
so part of: STC2
location: complement(join(5050392..5053803,5058956..5059167,5061884..5062026,5064081..5064919))
location: region:5050392-5064919:-1
so has part: feature:5064081-5064919:-1:exon
so has part: feature:5061884-5062026:-1:exon
so has part: feature:5058956-5059167:-1:exon
so has part: feature:5050392-5053803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5064081-5064919:-1:exon

position:5064081:-1
position: 5064081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5061884-5062026:-1:exon

position:5061884:-1
position: 5061884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5062026:-1
position: 5062026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5058956-5059167:-1:exon

position:5058956:-1
position: 5058956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5059167:-1
position: 5059167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5050392-5053803:-1:exon

position:5053803:-1
position: 5053803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: STC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stanniocalcin-2
translation: MCAERLGQFVTLALVLVTFDPARGTDATNTPEGPQDRGSQQKGRLSLQNTAEIQHCLVNAGDVGCGVFECFENNSCEIRGLHGICMTFLHNAGKFDAQGKSFIKDALKCKAHALRHRFSCISRKCPAIKEMVFQLQRECYLKHDLCSAAQENIRVMVEMIHFKDLLLHEPYVDLVNLLLTCGEEVKEAITHSVQAQCEQSWGSLCSILSFCTSAIQRPPTAPPERQLQGDRAKLSRGHPAEMGHHLAEPSSRETGRGAKGERGSKSHPNAHARGRAAGPGAQGTSGSSEWEDEQSEYSDIRR
SIO_010081: STC2
subclass of: SO_0000673
so part of: STC2
location: complement(join(5053401..5053803,5058956..5059167,5061884..5062026,5064081..5064231))
location: region:5053401-5064231:-1
so has part: feature:5064081-5064231:-1:exon
so has part: feature:5061884-5062026:-1:exon
so has part: feature:5058956-5059167:-1:exon
so has part: feature:5053401-5053803:-1:exon

XP_005694596.1
type: Protein
SIO_000068: ncbiprotein

position:5053401:-1
position: 5053401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5064231:-1
position: 5064231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5064081-5064231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5061884-5062026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5058956-5059167:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5053401-5053803:-1:exon

LOC102191373
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102191373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5065453..5129093
location: region:5065453-5129093:1
so has part: feature:5065453-5129093:1:exon
subclass of: SO_0000011

102191373
type: Gene
SIO_000068: ncbigene

position:5065453:1
position: 5065453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5129093:1
position: 5129093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5065453-5129093:1:exon

LOC102191373
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102191373
product: uncharacterized LOC102191373, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001919803.1
SIO_010081: LOC102191373
subclass of: SO_0000673
so part of: LOC102191373
location: join(5065453..5065820,5068282..5068341,5068903..5069275,5114277..5114461,5114552..5114837,5127757..5127929,5128365..5129093)
location: region:5065453-5129093:1
so has part: feature:5065453-5065820:1:exon
so has part: feature:5068282-5068341:1:exon
so has part: feature:5068903-5069275:1:exon
so has part: feature:5114277-5114461:1:exon
so has part: feature:5114552-5114837:1:exon
so has part: feature:5127757-5127929:1:exon
so has part: feature:5128365-5129093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5065453-5065820:1:exon

position:5065820:1
position: 5065820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5068282-5068341:1:exon

position:5068282:1
position: 5068282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5068341:1
position: 5068341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5068903-5069275:1:exon

position:5068903:1
position: 5068903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5069275:1
position: 5069275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5114277-5114461:1:exon

position:5114277:1
position: 5114277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5114461:1
position: 5114461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5114552-5114837:1:exon

position:5114552:1
position: 5114552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5114837:1
position: 5114837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5127757-5127929:1:exon

position:5127757:1
position: 5127757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5127929:1
position: 5127929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5128365-5129093:1:exon

position:5128365:1
position: 5128365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106501764
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106501764
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5084012..5096468
location: region:5084012-5096468:1
so has part: feature:5084012-5096468:1:exon
subclass of: SO_0000011

106501764
type: Gene
SIO_000068: ncbigene

position:5084012:1
position: 5084012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5096468:1
position: 5096468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5084012-5096468:1:exon

LOC106501764
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106501764
product: uncharacterized LOC106501764, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001296952.2
SIO_010081: LOC106501764
subclass of: SO_0000673
so part of: LOC106501764
location: join(5084012..5084801,5085561..5085674,5087239..5087376,5096159..5096468)
location: region:5084012-5096468:1
so has part: feature:5084012-5084801:1:exon
so has part: feature:5085561-5085674:1:exon
so has part: feature:5087239-5087376:1:exon
so has part: feature:5096159-5096468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5084012-5084801:1:exon

position:5084801:1
position: 5084801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5085561-5085674:1:exon

position:5085561:1
position: 5085561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5085674:1
position: 5085674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5087239-5087376:1:exon

position:5087239:1
position: 5087239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5087376:1
position: 5087376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5096159-5096468:1:exon

position:5096159:1
position: 5096159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106501764
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC106501764
product: uncharacterized LOC106501764, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001296951.2
SIO_010081: LOC106501764
subclass of: SO_0000673
so part of: LOC106501764
location: join(5085393..5085674,5087239..5087376,5096159..5096468)
location: region:5085393-5096468:1
so has part: feature:5085393-5085674:1:exon
so has part: feature:5087239-5087376:1:exon
so has part: feature:5096159-5096468:1:exon

position:5085393:1
position: 5085393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5085393-5085674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5087239-5087376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5096159-5096468:1:exon

LOC102191373
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102191373
product: uncharacterized LOC102191373, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001296949.2
SIO_010081: LOC102191373
subclass of: SO_0000673
so part of: LOC102191373
location: join(5107305..5108507,5114277..5114461,5114552..5114837,5127757..5127929,5128365..5129093)
location: region:5107305-5129093:1
so has part: feature:5107305-5108507:1:exon
so has part: feature:5114277-5114461:1:exon
so has part: feature:5114552-5114837:1:exon
so has part: feature:5127757-5127929:1:exon
so has part: feature:5128365-5129093:1:exon

position:5107305:1
position: 5107305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5107305-5108507:1:exon

position:5108507:1
position: 5108507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5114277-5114461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5114552-5114837:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5127757-5127929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5128365-5129093:1:exon

LOC102191373
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102191373
product: uncharacterized LOC102191373, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001919802.1
SIO_010081: LOC102191373
subclass of: SO_0000673
so part of: LOC102191373
location: join(5107305..5108507,5114277..5114461,5114552..5114837,5127757..5127929,5128368..5129093)
location: region:5107305-5129093:1
so has part: feature:5107305-5108507:1:exon
so has part: feature:5114277-5114461:1:exon
so has part: feature:5114552-5114837:1:exon
so has part: feature:5127757-5127929:1:exon
so has part: feature:5128368-5129093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5107305-5108507:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5114277-5114461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5114552-5114837:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5127757-5127929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5128368-5129093:1:exon

position:5128368:1
position: 5128368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102168203
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102168203
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5264645..5289845
location: region:5264645-5289845:1
so has part: feature:5264645-5289845:1:exon
subclass of: SO_0000011

102168203
type: Gene
SIO_000068: ncbigene

position:5264645:1
position: 5264645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5289845:1
position: 5289845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5264645-5289845:1:exon

LOC102168203
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102168203
product: uncharacterized LOC102168203
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_310857.3
SIO_010081: LOC102168203
subclass of: SO_0000673
so part of: LOC102168203
location: join(5264645..5264718,5285347..5285458,5289617..5289845)
location: region:5264645-5289845:1
so has part: feature:5264645-5264718:1:exon
so has part: feature:5285347-5285458:1:exon
so has part: feature:5289617-5289845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5264645-5264718:1:exon

position:5264718:1
position: 5264718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5285347-5285458:1:exon

position:5285347:1
position: 5285347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5285458:1
position: 5285458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5289617-5289845:1:exon

position:5289617:1
position: 5289617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BOD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: BOD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5378402..5390817)
location: region:5378402-5390817:-1
so has part: feature:5378402-5390817:-1:exon
subclass of: SO_0000010

102180629
type: Gene
SIO_000068: ncbigene

position:5378402:-1
position: 5378402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5390817:-1
position: 5390817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5378402-5390817:-1:exon

BOD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: BOD1
product: biorientation of chromosomes in cell division 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 36 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_018065661.1
SIO_010081: BOD1
subclass of: SO_0000673
so part of: BOD1
location: complement(join(5378402..5379180,5380128..5380324,5386409..5386533,5390373..5390817))
location: region:5378402-5390817:-1
so has part: feature:5390373-5390817:-1:exon
so has part: feature:5386409-5386533:-1:exon
so has part: feature:5380128-5380324:-1:exon
so has part: feature:5378402-5379180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5390373-5390817:-1:exon

position:5390373:-1
position: 5390373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5386409-5386533:-1:exon

position:5386409:-1
position: 5386409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5386533:-1
position: 5386533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5380128-5380324:-1:exon

position:5380128:-1
position: 5380128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5380324:-1
position: 5380324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5378402-5379180:-1:exon

position:5379180:-1
position: 5379180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BOD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: BOD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: biorientation of chromosomes in cell division protein 1
translation: MADGGGGGGTGAVGGGGAGPASAGAAAGGGGAGGGGGPINPASLPPGDPQLIALIVEQLKSRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFLAAQKKEAVPAPPPEPESQDPAAPSQDAS
SIO_010081: BOD1
subclass of: SO_0000673
so part of: BOD1
location: complement(join(5380129..5380324,5386409..5386533,5390373..5390609))
location: region:5380129-5390609:-1
so has part: feature:5390373-5390609:-1:exon
so has part: feature:5386409-5386533:-1:exon
so has part: feature:5380129-5380324:-1:exon

XP_017921150.1
type: Protein
SIO_000068: ncbiprotein

position:5380129:-1
position: 5380129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5390609:-1
position: 5390609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5390373-5390609:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5386409-5386533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5380129-5380324:-1:exon

LOC102180891
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102180891
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5561211..5562085
location: region:5561211-5562085:1
so has part: feature:5561211-5562085:1:exon

102180891
type: Gene
SIO_000068: ncbigene

position:5561211:1
position: 5561211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5562085:1
position: 5562085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5561211-5562085:1:exon

LOC102180891
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102180891
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102180891
subclass of: SO_0000673
so part of: LOC102180891
location: 5561211..5562085
location: region:5561211-5562085:1
so has part: feature:5561211-5562085:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5561211-5562085:1:exon

CPEB4
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CPEB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5658602..5730247
location: region:5658602-5730247:1
so has part: feature:5658602-5730247:1:exon
subclass of: SO_0000010

102168388
type: Gene
SIO_000068: ncbigene

position:5658602:1
position: 5658602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5730247:1
position: 5730247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5658602-5730247:1:exon

CPEB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CPEB4
product: cytoplasmic polyadenylation element binding protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 64 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005694540.3
SIO_010081: CPEB4
subclass of: SO_0000673
so part of: CPEB4
location: join(5658602..5660762,5678627..5678708,5698415..5698465,5712913..5712936,5714634..5714807,5719673..5719762,5720122..5720240,5721855..5721969,5723095..5723276,5725841..5730247)
location: region:5658602-5730247:1
so has part: feature:5658602-5660762:1:exon
so has part: feature:5678627-5678708:1:exon
so has part: feature:5698415-5698465:1:exon
so has part: feature:5712913-5712936:1:exon
so has part: feature:5714634-5714807:1:exon
so has part: feature:5719673-5719762:1:exon
so has part: feature:5720122-5720240:1:exon
so has part: feature:5721855-5721969:1:exon
so has part: feature:5723095-5723276:1:exon
so has part: feature:5725841-5730247:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5658602-5660762:1:exon

position:5660762:1
position: 5660762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5678627-5678708:1:exon

position:5678627:1
position: 5678627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5678708:1
position: 5678708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5698415-5698465:1:exon

position:5698415:1
position: 5698415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5698465:1
position: 5698465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5712913-5712936:1:exon

position:5712913:1
position: 5712913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5712936:1
position: 5712936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5714634-5714807:1:exon

position:5714634:1
position: 5714634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5714807:1
position: 5714807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5719673-5719762:1:exon

position:5719673:1
position: 5719673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5719762:1
position: 5719762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5720122-5720240:1:exon

position:5720122:1
position: 5720122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5720240:1
position: 5720240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5721855-5721969:1:exon

position:5721855:1
position: 5721855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5721969:1
position: 5721969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5723095-5723276:1:exon

position:5723095:1
position: 5723095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5723276:1
position: 5723276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5725841-5730247:1:exon

position:5725841:1
position: 5725841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPEB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CPEB4
product: cytoplasmic polyadenylation element binding protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 64 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005694541.3
SIO_010081: CPEB4
subclass of: SO_0000673
so part of: CPEB4
location: join(5658603..5660762,5678627..5678708,5698415..5698465,5714634..5714807,5719673..5719762,5720122..5720240,5721855..5721969,5723095..5723276,5725841..5730247)
location: region:5658603-5730247:1
so has part: feature:5658603-5660762:1:exon
so has part: feature:5678627-5678708:1:exon
so has part: feature:5698415-5698465:1:exon
so has part: feature:5714634-5714807:1:exon
so has part: feature:5719673-5719762:1:exon
so has part: feature:5720122-5720240:1:exon
so has part: feature:5721855-5721969:1:exon
so has part: feature:5723095-5723276:1:exon
so has part: feature:5725841-5730247:1:exon

position:5658603:1
position: 5658603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5658603-5660762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5678627-5678708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5698415-5698465:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5714634-5714807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5719673-5719762:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5720122-5720240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5721855-5721969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5723095-5723276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5725841-5730247:1:exon

CPEB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CPEB4
product: cytoplasmic polyadenylation element binding protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 64 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005694543.3
SIO_010081: CPEB4
subclass of: SO_0000673
so part of: CPEB4
location: join(5658603..5660762,5678627..5678708,5714634..5714807,5719673..5719762,5720122..5720240,5721855..5721969,5723095..5723276,5725841..5730246)
location: region:5658603-5730246:1
so has part: feature:5658603-5660762:1:exon
so has part: feature:5678627-5678708:1:exon
so has part: feature:5714634-5714807:1:exon
so has part: feature:5719673-5719762:1:exon
so has part: feature:5720122-5720240:1:exon
so has part: feature:5721855-5721969:1:exon
so has part: feature:5723095-5723276:1:exon
so has part: feature:5725841-5730246:1:exon

position:5730246:1
position: 5730246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5658603-5660762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5678627-5678708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5714634-5714807:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5719673-5719762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5720122-5720240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5721855-5721969:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5723095-5723276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5725841-5730246:1:exon

CPEB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CPEB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 4 isoform X1
translation: MGDYGFGVLVQSNTGNKSAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAWLFPAPATHNIQDEILGSEKAKSQQQEPQDPLEKQQLSPSPGQEAGILPETEKAKSEENQGDNSSENGNGKEKIRIESPVLTGFDYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSSTIINEDASFFHQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPWSSYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQLQKYARPSSAFAPKSWMEDSLNRADNIFPFPDRPRTFDMHSLESSLIDIMRAENDSIKGRLNYSYPGSDSSLLINARTYGRRRGQSSLFPMEDGFLDDGRGDQPLHSGLGSPHCFTHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
SIO_010081: CPEB4
subclass of: SO_0000673
so part of: CPEB4
location: join(5659638..5660762,5678627..5678708,5698415..5698465,5712913..5712936,5714634..5714807,5719673..5719762,5720122..5720240,5721855..5721969,5723095..5723276,5725841..5726068)
location: region:5659638-5726068:1
so has part: feature:5659638-5660762:1:exon
so has part: feature:5678627-5678708:1:exon
so has part: feature:5698415-5698465:1:exon
so has part: feature:5712913-5712936:1:exon
so has part: feature:5714634-5714807:1:exon
so has part: feature:5719673-5719762:1:exon
so has part: feature:5720122-5720240:1:exon
so has part: feature:5721855-5721969:1:exon
so has part: feature:5723095-5723276:1:exon
so has part: feature:5725841-5726068:1:exon

XP_005694597.1
type: Protein
SIO_000068: ncbiprotein

position:5659638:1
position: 5659638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5726068:1
position: 5726068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5659638-5660762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5678627-5678708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5698415-5698465:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5712913-5712936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5714634-5714807:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5719673-5719762:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5720122-5720240:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5721855-5721969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5723095-5723276:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5725841-5726068:1:exon

CPEB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CPEB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 4 isoform X2
translation: MGDYGFGVLVQSNTGNKSAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAWLFPAPATHNIQDEILGSEKAKSQQQEPQDPLEKQQLSPSPGQEAGILPETEKAKSEENQGDNSSENGNGKEKIRIESPVLTGFDYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSSTIINEDASFFHQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPWSSYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQLQKYARPSSAFAPKSWMEDSLNRADNIFPFPDRPRTFDMHSLESSLIDIMRAENDSIKGRLNYSYPGSDSSLLINGQSSLFPMEDGFLDDGRGDQPLHSGLGSPHCFTHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
SIO_010081: CPEB4
subclass of: SO_0000673
so part of: CPEB4
location: join(5659638..5660762,5678627..5678708,5698415..5698465,5714634..5714807,5719673..5719762,5720122..5720240,5721855..5721969,5723095..5723276,5725841..5726068)
location: region:5659638-5726068:1
so has part: feature:5659638-5660762:1:exon
so has part: feature:5678627-5678708:1:exon
so has part: feature:5698415-5698465:1:exon
so has part: feature:5714634-5714807:1:exon
so has part: feature:5719673-5719762:1:exon
so has part: feature:5720122-5720240:1:exon
so has part: feature:5721855-5721969:1:exon
so has part: feature:5723095-5723276:1:exon
so has part: feature:5725841-5726068:1:exon

XP_005694598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5659638-5660762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5678627-5678708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5698415-5698465:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5714634-5714807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5719673-5719762:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5720122-5720240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5721855-5721969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5723095-5723276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5725841-5726068:1:exon

CPEB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CPEB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 4 isoform X3
translation: MGDYGFGVLVQSNTGNKSAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAWLFPAPATHNIQDEILGSEKAKSQQQEPQDPLEKQQLSPSPGQEAGILPETEKAKSEENQGDNSSENGNGKEKIRIESPVLTGFDYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSSTIINEDASFFHQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPWSSYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQLQKYARPSSAFAPKSWMEDSLNRADNIFPFPDRPRTFDMHSLESSLIDIMRAENDSIKGQSSLFPMEDGFLDDGRGDQPLHSGLGSPHCFTHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
SIO_010081: CPEB4
subclass of: SO_0000673
so part of: CPEB4
location: join(5659638..5660762,5678627..5678708,5714634..5714807,5719673..5719762,5720122..5720240,5721855..5721969,5723095..5723276,5725841..5726068)
location: region:5659638-5726068:1
so has part: feature:5659638-5660762:1:exon
so has part: feature:5678627-5678708:1:exon
so has part: feature:5714634-5714807:1:exon
so has part: feature:5719673-5719762:1:exon
so has part: feature:5720122-5720240:1:exon
so has part: feature:5721855-5721969:1:exon
so has part: feature:5723095-5723276:1:exon
so has part: feature:5725841-5726068:1:exon

XP_005694600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5659638-5660762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5678627-5678708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5714634-5714807:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5719673-5719762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5720122-5720240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5721855-5721969:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5723095-5723276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5725841-5726068:1:exon

C20H5orf47
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: C20H5orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5757040..5780464
location: region:5757040-5780464:1
so has part: feature:5757040-5780464:1:exon
subclass of: SO_0000010

102169220
type: Gene
SIO_000068: ncbigene

position:5757040:1
position: 5757040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5780464:1
position: 5780464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5757040-5780464:1:exon

C20H5orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: C20H5orf47
product: chromosome 20 C5orf47 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005694544.2
SIO_010081: C20H5orf47
subclass of: SO_0000673
so part of: C20H5orf47
location: join(5757040..5757310,5769589..5769677,5774615..5774714,5776646..5776684,5780281..5780464)
location: region:5757040-5780464:1
so has part: feature:5757040-5757310:1:exon
so has part: feature:5769589-5769677:1:exon
so has part: feature:5774615-5774714:1:exon
so has part: feature:5776646-5776684:1:exon
so has part: feature:5780281-5780464:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5757040-5757310:1:exon

position:5757310:1
position: 5757310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5769589-5769677:1:exon

position:5769589:1
position: 5769589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5769677:1
position: 5769677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5774615-5774714:1:exon

position:5774615:1
position: 5774615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5774714:1
position: 5774714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5776646-5776684:1:exon

position:5776646:1
position: 5776646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5776684:1
position: 5776684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5780281-5780464:1:exon

position:5780281:1
position: 5780281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C20H5orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: C20H5orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C5orf47 homolog
translation: MDGPPVGLGTERRVRTALRGCPEKPQKCNKGLTQKNLAKEFDFPIPLSETSKIMKKKNKKVLVWSGVYKVISKMLEENEKYRLRLKCQQLSRENSKDRK
SIO_010081: C20H5orf47
subclass of: SO_0000673
so part of: C20H5orf47
location: join(5757220..5757310,5769589..5769677,5774615..5774714,5776646..5776665)
location: region:5757220-5776665:1
so has part: feature:5757220-5757310:1:exon
so has part: feature:5769589-5769677:1:exon
so has part: feature:5774615-5774714:1:exon
so has part: feature:5776646-5776665:1:exon

XP_005694601.1
type: Protein
SIO_000068: ncbiprotein

position:5757220:1
position: 5757220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5776665:1
position: 5776665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5757220-5757310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5769589-5769677:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5774615-5774714:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5776646-5776665:1:exon

LOC102181163
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102181163
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5806382..5878643
location: region:5806382-5878643:1
so has part: feature:5806382-5878643:1:exon
subclass of: SO_0000010

102181163
type: Gene
SIO_000068: ncbigene

position:5806382:1
position: 5806382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5878643:1
position: 5878643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5806382-5878643:1:exon

LOC102181163
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102181163
product: neuron-specific protein family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 35 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018065786.1
SIO_010081: LOC102181163
subclass of: SO_0000673
so part of: LOC102181163
location: join(5806382..5806555,5807449..5807599,5826418..5826501,5873267..5873377,5876779..5878643)
location: region:5806382-5878643:1
so has part: feature:5806382-5806555:1:exon
so has part: feature:5807449-5807599:1:exon
so has part: feature:5826418-5826501:1:exon
so has part: feature:5873267-5873377:1:exon
so has part: feature:5876779-5878643:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5806382-5806555:1:exon

position:5806555:1
position: 5806555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5807449-5807599:1:exon

position:5807449:1
position: 5807449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5807599:1
position: 5807599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5826418-5826501:1:exon

position:5826418:1
position: 5826418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5826501:1
position: 5826501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5873267-5873377:1:exon

position:5873267:1
position: 5873267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5873377:1
position: 5873377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5876779-5878643:1:exon

position:5876779:1
position: 5876779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102181163
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102181163
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuron-specific protein family member 2
translation: MVKLNSNPSEKGAKPPSVEDGFQTVPLITPLEVNHLQLPAPEKVIVKTRTEYQPEQKNKGKFRVPKIAEFTVTILVSLALAFLACIVFLVVYKAFTYDHSCPEGFVYKHKRCIPASLDAYYSSQDPSSRSRFYTVISHYSVAKQSTARAIGPWLSAAAVIHEPKPPKTQGH
SIO_010081: LOC102181163
subclass of: SO_0000673
so part of: LOC102181163
location: join(5807471..5807599,5826418..5826501,5873267..5873377,5876779..5876970)
location: region:5807471-5876970:1
so has part: feature:5807471-5807599:1:exon
so has part: feature:5826418-5826501:1:exon
so has part: feature:5873267-5873377:1:exon
so has part: feature:5876779-5876970:1:exon

XP_017921275.1
type: Protein
SIO_000068: ncbiprotein

position:5807471:1
position: 5807471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5876970:1
position: 5876970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5807471-5807599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5826418-5826501:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5873267-5873377:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5876779-5876970:1:exon

LOC102176729
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102176729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5820107..5821734)
location: region:5820107-5821734:-1
so has part: feature:5820107-5821734:-1:exon

102176729
type: Gene
SIO_000068: ncbigene

position:5820107:-1
position: 5820107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5821734:-1
position: 5821734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5820107-5821734:-1:exon

LOC102176729
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102176729
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102176729
subclass of: SO_0000673
so part of: LOC102176729
location: complement(5820107..5821443)
location: region:5820107-5821443:-1
so has part: feature:5820107-5821443:-1:exon

position:5821443:-1
position: 5821443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5820107-5821443:-1:exon

LOC102176729
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102176729
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102176729
subclass of: SO_0000673
so part of: LOC102176729
location: complement(5821498..5821734)
location: region:5821498-5821734:-1
so has part: feature:5821498-5821734:-1:exon

position:5821498:-1
position: 5821498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5821498-5821734:-1:exon

TRNAG-UCC
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAG-UCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(6137549..6137620)
location: region:6137549-6137620:-1
so has part: feature:6137549-6137620:-1:exon
subclass of: SO_0000663

108638430
type: Gene
SIO_000068: ncbigene

position:6137549:-1
position: 6137549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6137620:-1
position: 6137620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6137549-6137620:-1:exon

TRNAG-UCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAG-UCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon UCC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(6137585..6137587),aa:Gly, seq:tcc)
SIO_010081: TRNAG-UCC
subclass of: SO_0000673
so part of: TRNAG-UCC
location: complement(6137549..6137620)
location: region:6137549-6137620:-1
so has part: feature:6137549-6137620:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6137549-6137620:-1:exon

LOC102181433
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102181433
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6360971..6361905)
location: region:6360971-6361905:-1
so has part: feature:6360971-6361905:-1:exon

102181433
type: Gene
SIO_000068: ncbigene

position:6360971:-1
position: 6360971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6361905:-1
position: 6361905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6360971-6361905:-1:exon

LOC102181433
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102181433
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102181433
subclass of: SO_0000673
so part of: LOC102181433
location: complement(6360971..6361905)
location: region:6360971-6361905:-1
so has part: feature:6360971-6361905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6360971-6361905:-1:exon

LOC102169517
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102169517
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6413275..6415947)
location: region:6413275-6415947:-1
so has part: feature:6413275-6415947:-1:exon
subclass of: SO_0000011

102169517
type: Gene
SIO_000068: ncbigene

position:6413275:-1
position: 6413275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6415947:-1
position: 6415947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6413275-6415947:-1:exon

LOC102169517
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC102169517
product: uncharacterized LOC102169517
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001296939.2
SIO_010081: LOC102169517
subclass of: SO_0000673
so part of: LOC102169517
location: complement(join(6413275..6413361,6413696..6413850,6415828..6415947))
location: region:6413275-6415947:-1
so has part: feature:6415828-6415947:-1:exon
so has part: feature:6413696-6413850:-1:exon
so has part: feature:6413275-6413361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6415828-6415947:-1:exon

position:6415828:-1
position: 6415828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6413696-6413850:-1:exon

position:6413696:-1
position: 6413696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6413850:-1
position: 6413850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6413275-6413361:-1:exon

position:6413361:-1
position: 6413361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MSX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: MSX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6511346..6517427
location: region:6511346-6517427:1
so has part: feature:6511346-6517427:1:exon
subclass of: SO_0000010

102169797
type: Gene
SIO_000068: ncbigene

position:6511346:1
position: 6511346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6517427:1
position: 6517427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6511346-6517427:1:exon

MSX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: MSX2
product: msh homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 34 ESTs, 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_018065780.1
SIO_010081: MSX2
subclass of: SO_0000673
so part of: MSX2
location: join(6511346..6511841,6515723..6517427)
location: region:6511346-6517427:1
so has part: feature:6511346-6511841:1:exon
so has part: feature:6515723-6517427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6511346-6511841:1:exon

position:6511841:1
position: 6511841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6515723-6517427:1:exon

position:6515723:1
position: 6515723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MSX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: MSX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein MSX-2
translation: MASPSKGNDLFSSDEEGPAMVAGPGPGPGGAEGAAEERRVKVSSLPFSVEALMSDKKPPKETSPRPAESASAGATLRPLLLPGHGVREAHSPGPLVKPFETASVKSENSEDGAAWMQEPGRYSPPPRHMSPTTCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPSGFSLPFPINSPLQAASLYGASYPFHRPVLPIPPVGLYATPVGYGMYHLS
SIO_010081: MSX2
subclass of: SO_0000673
so part of: MSX2
location: join(6511463..6511841,6515723..6516147)
location: region:6511463-6516147:1
so has part: feature:6511463-6511841:1:exon
so has part: feature:6515723-6516147:1:exon

XP_017921269.1
type: Protein
SIO_000068: ncbiprotein

position:6511463:1
position: 6511463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6516147:1
position: 6516147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6511463-6511841:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6515723-6516147:1:exon

FAM169A
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: FAM169A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6734462..6802667
location: region:6734462-6802667:1
so has part: feature:6734462-6802667:1:exon
subclass of: SO_0000010

102170089
type: Gene
SIO_000068: ncbigene

position:6734462:1
position: 6734462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6802667:1
position: 6802667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6734462-6802667:1:exon

FAM169A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FAM169A
product: family with sequence similarity 169 member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 28 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_013972678.2
SIO_010081: FAM169A
subclass of: SO_0000673
so part of: FAM169A
location: join(6734462..6734593,6753919..6754053,6755226..6755325,6755637..6755722,6757821..6757992,6776803..6776982,6780901..6781029,6783650..6783762,6786710..6786749,6787057..6787207,6793333..6793489,6796002..6796205,6798449..6802667)
location: region:6734462-6802667:1
so has part: feature:6734462-6734593:1:exon
so has part: feature:6753919-6754053:1:exon
so has part: feature:6755226-6755325:1:exon
so has part: feature:6755637-6755722:1:exon
so has part: feature:6757821-6757992:1:exon
so has part: feature:6776803-6776982:1:exon
so has part: feature:6780901-6781029:1:exon
so has part: feature:6783650-6783762:1:exon
so has part: feature:6786710-6786749:1:exon
so has part: feature:6787057-6787207:1:exon
so has part: feature:6793333-6793489:1:exon
so has part: feature:6796002-6796205:1:exon
so has part: feature:6798449-6802667:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6734462-6734593:1:exon

position:6734593:1
position: 6734593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6753919-6754053:1:exon

position:6753919:1
position: 6753919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6754053:1
position: 6754053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6755226-6755325:1:exon

position:6755226:1
position: 6755226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6755325:1
position: 6755325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6755637-6755722:1:exon

position:6755637:1
position: 6755637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6755722:1
position: 6755722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6757821-6757992:1:exon

position:6757821:1
position: 6757821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6757992:1
position: 6757992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6776803-6776982:1:exon

position:6776803:1
position: 6776803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6776982:1
position: 6776982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6780901-6781029:1:exon

position:6780901:1
position: 6780901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6781029:1
position: 6781029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6783650-6783762:1:exon

position:6783650:1
position: 6783650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6783762:1
position: 6783762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6786710-6786749:1:exon

position:6786710:1
position: 6786710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6786749:1
position: 6786749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6787057-6787207:1:exon

position:6787057:1
position: 6787057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6787207:1
position: 6787207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6793333-6793489:1:exon

position:6793333:1
position: 6793333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6793489:1
position: 6793489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6796002-6796205:1:exon

position:6796002:1
position: 6796002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6796205:1
position: 6796205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6798449-6802667:1:exon

position:6798449:1
position: 6798449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM169A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FAM169A
product: family with sequence similarity 169 member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 28 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018065539.1
SIO_010081: FAM169A
subclass of: SO_0000673
so part of: FAM169A
location: join(6734988..6735113,6753919..6754053,6755226..6755325,6755637..6755722,6757821..6757992,6776803..6776982,6780901..6781029,6783650..6783762,6786710..6786749,6787057..6787207,6793333..6793489,6796002..6796205,6798449..6802667)
location: region:6734988-6802667:1
so has part: feature:6734988-6735113:1:exon
so has part: feature:6753919-6754053:1:exon
so has part: feature:6755226-6755325:1:exon
so has part: feature:6755637-6755722:1:exon
so has part: feature:6757821-6757992:1:exon
so has part: feature:6776803-6776982:1:exon
so has part: feature:6780901-6781029:1:exon
so has part: feature:6783650-6783762:1:exon
so has part: feature:6786710-6786749:1:exon
so has part: feature:6787057-6787207:1:exon
so has part: feature:6793333-6793489:1:exon
so has part: feature:6796002-6796205:1:exon
so has part: feature:6798449-6802667:1:exon

position:6734988:1
position: 6734988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6734988-6735113:1:exon

position:6735113:1
position: 6735113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6753919-6754053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6755226-6755325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6755637-6755722:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6757821-6757992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6776803-6776982:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6780901-6781029:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6783650-6783762:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6786710-6786749:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6787057-6787207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6793333-6793489:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6796002-6796205:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6798449-6802667:1:exon

FAM169A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FAM169A
product: family with sequence similarity 169 member A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018065540.1
SIO_010081: FAM169A
subclass of: SO_0000673
so part of: FAM169A
location: join(6734988..6735113,6753919..6754053,6755226..6755325,6755637..6755722,6757821..6757992,6776803..6776982,6780901..6781029,6783653..6783762,6786710..6786749,6787057..6787207,6793333..6793489,6796002..6796205,6798449..6802667)
location: region:6734988-6802667:1
so has part: feature:6734988-6735113:1:exon
so has part: feature:6753919-6754053:1:exon
so has part: feature:6755226-6755325:1:exon
so has part: feature:6755637-6755722:1:exon
so has part: feature:6757821-6757992:1:exon
so has part: feature:6776803-6776982:1:exon
so has part: feature:6780901-6781029:1:exon
so has part: feature:6783653-6783762:1:exon
so has part: feature:6786710-6786749:1:exon
so has part: feature:6787057-6787207:1:exon
so has part: feature:6793333-6793489:1:exon
so has part: feature:6796002-6796205:1:exon
so has part: feature:6798449-6802667:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6734988-6735113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6753919-6754053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6755226-6755325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6755637-6755722:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6757821-6757992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6776803-6776982:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6780901-6781029:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6783653-6783762:1:exon

position:6783653:1
position: 6783653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6786710-6786749:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6787057-6787207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6793333-6793489:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6796002-6796205:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6798449-6802667:1:exon

FAM169A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FAM169A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: soluble lamin-associated protein of 75 kDa isoform X1
translation: MAFPVDMLDNCSHEELENSAEDYMSDLRCGDPENPECFSLLNITIPISLSNVGFVPLYGGDQTQKVLALFAPEDSLTAVALYLADQWWAIDDIVKTSAPSREGLKQVRTLGERVVLYVLNRIIYRKQEMERNEIPFLCHSSTDYAKILWKKGEAIGFYSVKPTGSTCASFLTQSYQLPVLDTMFVRKKYRGKDFGLHMLEDFVDSFTEDALGLRYPLTSLMYIACNQYFEKYPGDHELLWEVEGVGHWHQRVPITRALQRETLKITAVSQNEAKRSTSGEYGLASVPEYEARAEDSQSSEMQLTIDSLKDAFASTSEGHDKTPVSTRTRSSHLKRPKIGKRFQDSEFSSSQGEDEKTPQTSPTASVNKLESTARTSESSEEFLEEEPEQSVIEFEDESSDKDVQPAPETQPGLEKLEGEKESALEPMNGEIIDDTLKTSLVTEEEDSTSEVLDEELKLQSFNSNEDSTNLAPLVVDSSQPLEGVAQEKTSHATDSEMLLDEGPSDDKGHTEEKLPPVSRKKAHFGSSDNVATIANEERSDSAFPNSVIAEFSEESIPENVSPNTTASLEDQGEEGLAEPQESSAALPQSSLVEVELEDVPFSQNAGQKNLSEEQSEASSEQLDQLTQSTEKTVDSSSEEIEVEVPVVDRRNLRRKAKGHKGPAKKKAKLT
SIO_010081: FAM169A
subclass of: SO_0000673
so part of: FAM169A
location: join(6753922..6754053,6755226..6755325,6755637..6755722,6757821..6757992,6776803..6776982,6780901..6781029,6783650..6783762,6786710..6786749,6787057..6787207,6793333..6793489,6796002..6796205,6798449..6798997)
location: region:6753922-6798997:1
so has part: feature:6753922-6754053:1:exon
so has part: feature:6755226-6755325:1:exon
so has part: feature:6755637-6755722:1:exon
so has part: feature:6757821-6757992:1:exon
so has part: feature:6776803-6776982:1:exon
so has part: feature:6780901-6781029:1:exon
so has part: feature:6783650-6783762:1:exon
so has part: feature:6786710-6786749:1:exon
so has part: feature:6787057-6787207:1:exon
so has part: feature:6793333-6793489:1:exon
so has part: feature:6796002-6796205:1:exon
so has part: feature:6798449-6798997:1:exon

XP_017921028.1
type: Protein
SIO_000068: ncbiprotein

position:6753922:1
position: 6753922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6798997:1
position: 6798997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6753922-6754053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6755226-6755325:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6755637-6755722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6757821-6757992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6776803-6776982:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6780901-6781029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6783650-6783762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6786710-6786749:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6787057-6787207:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6793333-6793489:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6796002-6796205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6798449-6798997:1:exon

FAM169A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FAM169A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: soluble lamin-associated protein of 75 kDa isoform X1
translation: MAFPVDMLDNCSHEELENSAEDYMSDLRCGDPENPECFSLLNITIPISLSNVGFVPLYGGDQTQKVLALFAPEDSLTAVALYLADQWWAIDDIVKTSAPSREGLKQVRTLGERVVLYVLNRIIYRKQEMERNEIPFLCHSSTDYAKILWKKGEAIGFYSVKPTGSTCASFLTQSYQLPVLDTMFVRKKYRGKDFGLHMLEDFVDSFTEDALGLRYPLTSLMYIACNQYFEKYPGDHELLWEVEGVGHWHQRVPITRALQRETLKITAVSQNEAKRSTSGEYGLASVPEYEARAEDSQSSEMQLTIDSLKDAFASTSEGHDKTPVSTRTRSSHLKRPKIGKRFQDSEFSSSQGEDEKTPQTSPTASVNKLESTARTSESSEEFLEEEPEQSVIEFEDESSDKDVQPAPETQPGLEKLEGEKESALEPMNGEIIDDTLKTSLVTEEEDSTSEVLDEELKLQSFNSNEDSTNLAPLVVDSSQPLEGVAQEKTSHATDSEMLLDEGPSDDKGHTEEKLPPVSRKKAHFGSSDNVATIANEERSDSAFPNSVIAEFSEESIPENVSPNTTASLEDQGEEGLAEPQESSAALPQSSLVEVELEDVPFSQNAGQKNLSEEQSEASSEQLDQLTQSTEKTVDSSSEEIEVEVPVVDRRNLRRKAKGHKGPAKKKAKLT
SIO_010081: FAM169A
subclass of: SO_0000673
so part of: FAM169A
location: join(6753922..6754053,6755226..6755325,6755637..6755722,6757821..6757992,6776803..6776982,6780901..6781029,6783650..6783762,6786710..6786749,6787057..6787207,6793333..6793489,6796002..6796205,6798449..6798997)
location: region:6753922-6798997:1
so has part: feature:6753922-6754053:1:exon
so has part: feature:6755226-6755325:1:exon
so has part: feature:6755637-6755722:1:exon
so has part: feature:6757821-6757992:1:exon
so has part: feature:6776803-6776982:1:exon
so has part: feature:6780901-6781029:1:exon
so has part: feature:6783650-6783762:1:exon
so has part: feature:6786710-6786749:1:exon
so has part: feature:6787057-6787207:1:exon
so has part: feature:6793333-6793489:1:exon
so has part: feature:6796002-6796205:1:exon
so has part: feature:6798449-6798997:1:exon

XP_013828132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6753922-6754053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6755226-6755325:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6755637-6755722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6757821-6757992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6776803-6776982:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6780901-6781029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6783650-6783762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6786710-6786749:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6787057-6787207:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6793333-6793489:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6796002-6796205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6798449-6798997:1:exon

FAM169A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FAM169A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: soluble lamin-associated protein of 75 kDa isoform X2
translation: MAFPVDMLDNCSHEELENSAEDYMSDLRCGDPENPECFSLLNITIPISLSNVGFVPLYGGDQTQKVLALFAPEDSLTAVALYLADQWWAIDDIVKTSAPSREGLKQVRTLGERVVLYVLNRIIYRKQEMERNEIPFLCHSSTDYAKILWKKGEAIGFYSVKPTGSTCASFLTQSYQLPVLDTMFVRKKYRGKDFGLHMLEDFVDSFTEDALGLRYPLTSLMYIACNQYFEKYPGDHELLWEVEGVGHWHQRVPITRALQRETLKITVSQNEAKRSTSGEYGLASVPEYEARAEDSQSSEMQLTIDSLKDAFASTSEGHDKTPVSTRTRSSHLKRPKIGKRFQDSEFSSSQGEDEKTPQTSPTASVNKLESTARTSESSEEFLEEEPEQSVIEFEDESSDKDVQPAPETQPGLEKLEGEKESALEPMNGEIIDDTLKTSLVTEEEDSTSEVLDEELKLQSFNSNEDSTNLAPLVVDSSQPLEGVAQEKTSHATDSEMLLDEGPSDDKGHTEEKLPPVSRKKAHFGSSDNVATIANEERSDSAFPNSVIAEFSEESIPENVSPNTTASLEDQGEEGLAEPQESSAALPQSSLVEVELEDVPFSQNAGQKNLSEEQSEASSEQLDQLTQSTEKTVDSSSEEIEVEVPVVDRRNLRRKAKGHKGPAKKKAKLT
SIO_010081: FAM169A
subclass of: SO_0000673
so part of: FAM169A
location: join(6753922..6754053,6755226..6755325,6755637..6755722,6757821..6757992,6776803..6776982,6780901..6781029,6783653..6783762,6786710..6786749,6787057..6787207,6793333..6793489,6796002..6796205,6798449..6798997)
location: region:6753922-6798997:1
so has part: feature:6753922-6754053:1:exon
so has part: feature:6755226-6755325:1:exon
so has part: feature:6755637-6755722:1:exon
so has part: feature:6757821-6757992:1:exon
so has part: feature:6776803-6776982:1:exon
so has part: feature:6780901-6781029:1:exon
so has part: feature:6783653-6783762:1:exon
so has part: feature:6786710-6786749:1:exon
so has part: feature:6787057-6787207:1:exon
so has part: feature:6793333-6793489:1:exon
so has part: feature:6796002-6796205:1:exon
so has part: feature:6798449-6798997:1:exon

XP_017921029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6753922-6754053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6755226-6755325:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6755637-6755722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6757821-6757992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6776803-6776982:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6780901-6781029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6783653-6783762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6786710-6786749:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6787057-6787207:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6793333-6793489:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6796002-6796205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6798449-6798997:1:exon

LOC102170360
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102170360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6803407..6810589)
location: region:6803407-6810589:-1
so has part: feature:6803407-6810589:-1:exon
subclass of: SO_0000010

102170360
type: Gene
SIO_000068: ncbigene

position:6803407:-1
position: 6803407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6810589:-1
position: 6810589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6803407-6810589:-1:exon

LOC102170360
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102170360
product: ribosome biogenesis protein NSA2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 19 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_005694547.3
SIO_010081: LOC102170360
subclass of: SO_0000673
so part of: LOC102170360
location: complement(join(6803407..6803659,6805021..6805213,6806619..6806798,6808086..6808236,6808328..6808515,6810466..6810589))
location: region:6803407-6810589:-1
so has part: feature:6810466-6810589:-1:exon
so has part: feature:6808328-6808515:-1:exon
so has part: feature:6808086-6808236:-1:exon
so has part: feature:6806619-6806798:-1:exon
so has part: feature:6805021-6805213:-1:exon
so has part: feature:6803407-6803659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6810466-6810589:-1:exon

position:6810466:-1
position: 6810466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6808328-6808515:-1:exon

position:6808328:-1
position: 6808328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6808515:-1
position: 6808515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6808086-6808236:-1:exon

position:6808086:-1
position: 6808086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6808236:-1
position: 6808236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6806619-6806798:-1:exon

position:6806619:-1
position: 6806619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6806798:-1
position: 6806798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6805021-6805213:-1:exon

position:6805021:-1
position: 6805021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6805213:-1
position: 6805213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6803407-6803659:-1:exon

position:6803659:-1
position: 6803659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102170360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102170360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome biogenesis protein NSA2 homolog
translation: MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV
SIO_010081: LOC102170360
subclass of: SO_0000673
so part of: LOC102170360
location: complement(join(6803592..6803659,6805021..6805213,6806619..6806798,6808086..6808236,6808328..6808515,6810466..6810468))
location: region:6803592-6810468:-1
so has part: feature:6810466-6810468:-1:exon
so has part: feature:6808328-6808515:-1:exon
so has part: feature:6808086-6808236:-1:exon
so has part: feature:6806619-6806798:-1:exon
so has part: feature:6805021-6805213:-1:exon
so has part: feature:6803592-6803659:-1:exon

XP_005694604.1
type: Protein
SIO_000068: ncbiprotein

position:6803592:-1
position: 6803592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6810468:-1
position: 6810468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6810466-6810468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6808328-6808515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6808086-6808236:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6806619-6806798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6805021-6805213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6803592-6803659:-1:exon

GFM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: GFM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6810712..6861937
location: region:6810712-6861937:1
so has part: feature:6810712-6861937:1:exon
subclass of: SO_0000010

102170634
type: Gene
SIO_000068: ncbigene

position:6810712:1
position: 6810712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6861937:1
position: 6861937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6810712-6861937:1:exon

GFM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: GFM2
product: G elongation factor mitochondrial 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_018065536.1
SIO_010081: GFM2
subclass of: SO_0000673
so part of: GFM2
location: join(6810712..6810883,6818105..6818191,6820353..6820437,6821799..6821856,6822297..6822394,6824471..6824596,6825336..6825424,6830057..6830145,6831813..6831873,6832134..6832318,6836663..6836717,6837490..6837570,6838870..6839018,6840584..6840724,6840814..6840913,6841634..6841823,6843286..6843362,6846497..6846635,6851622..6851801,6853043..6853158,6860842..6861024,6861471..6861937)
location: region:6810712-6861937:1
so has part: feature:6810712-6810883:1:exon
so has part: feature:6818105-6818191:1:exon
so has part: feature:6820353-6820437:1:exon
so has part: feature:6821799-6821856:1:exon
so has part: feature:6822297-6822394:1:exon
so has part: feature:6824471-6824596:1:exon
so has part: feature:6825336-6825424:1:exon
so has part: feature:6830057-6830145:1:exon
so has part: feature:6831813-6831873:1:exon
so has part: feature:6832134-6832318:1:exon
so has part: feature:6836663-6836717:1:exon
so has part: feature:6837490-6837570:1:exon
so has part: feature:6838870-6839018:1:exon
so has part: feature:6840584-6840724:1:exon
so has part: feature:6840814-6840913:1:exon
so has part: feature:6841634-6841823:1:exon
so has part: feature:6843286-6843362:1:exon
so has part: feature:6846497-6846635:1:exon
so has part: feature:6851622-6851801:1:exon
so has part: feature:6853043-6853158:1:exon
so has part: feature:6860842-6861024:1:exon
so has part: feature:6861471-6861937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6810712-6810883:1:exon

position:6810883:1
position: 6810883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6818105-6818191:1:exon

position:6818105:1
position: 6818105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6818191:1
position: 6818191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6820353-6820437:1:exon

position:6820353:1
position: 6820353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6820437:1
position: 6820437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6821799-6821856:1:exon

position:6821799:1
position: 6821799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6821856:1
position: 6821856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6822297-6822394:1:exon

position:6822297:1
position: 6822297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6822394:1
position: 6822394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6824471-6824596:1:exon

position:6824471:1
position: 6824471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6824596:1
position: 6824596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6825336-6825424:1:exon

position:6825336:1
position: 6825336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6825424:1
position: 6825424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6830057-6830145:1:exon

position:6830057:1
position: 6830057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6830145:1
position: 6830145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6831813-6831873:1:exon

position:6831813:1
position: 6831813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6831873:1
position: 6831873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6832134-6832318:1:exon

position:6832134:1
position: 6832134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6832318:1
position: 6832318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6836663-6836717:1:exon

position:6836663:1
position: 6836663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6836717:1
position: 6836717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6837490-6837570:1:exon

position:6837490:1
position: 6837490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6837570:1
position: 6837570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6838870-6839018:1:exon

position:6838870:1
position: 6838870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6839018:1
position: 6839018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6840584-6840724:1:exon

position:6840584:1
position: 6840584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6840724:1
position: 6840724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6840814-6840913:1:exon

position:6840814:1
position: 6840814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6840913:1
position: 6840913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6841634-6841823:1:exon

position:6841634:1
position: 6841634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6841823:1
position: 6841823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6843286-6843362:1:exon

position:6843286:1
position: 6843286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6843362:1
position: 6843362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6846497-6846635:1:exon

position:6846497:1
position: 6846497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6846635:1
position: 6846635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6851622-6851801:1:exon

position:6851622:1
position: 6851622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6851801:1
position: 6851801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6853043-6853158:1:exon

position:6853043:1
position: 6853043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6853158:1
position: 6853158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6860842-6861024:1:exon

position:6860842:1
position: 6860842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6861024:1
position: 6861024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6861471-6861937:1:exon

position:6861471:1
position: 6861471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GFM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: GFM2
product: G elongation factor mitochondrial 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 31 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_018065538.1
SIO_010081: GFM2
subclass of: SO_0000673
so part of: GFM2
location: join(6810712..6810883,6818105..6818191,6820353..6820437,6821799..6821856,6822297..6822394,6824471..6824596,6825336..6825424,6830057..6830145,6831813..6831873,6832134..6832313,6837490..6837570,6838870..6839018,6840584..6840724,6840814..6840913,6841634..6841823,6843286..6843362,6846497..6846635,6851622..6851801,6853043..6853158,6860842..6861024,6861471..6861937)
location: region:6810712-6861937:1
so has part: feature:6810712-6810883:1:exon
so has part: feature:6818105-6818191:1:exon
so has part: feature:6820353-6820437:1:exon
so has part: feature:6821799-6821856:1:exon
so has part: feature:6822297-6822394:1:exon
so has part: feature:6824471-6824596:1:exon
so has part: feature:6825336-6825424:1:exon
so has part: feature:6830057-6830145:1:exon
so has part: feature:6831813-6831873:1:exon
so has part: feature:6832134-6832313:1:exon
so has part: feature:6837490-6837570:1:exon
so has part: feature:6838870-6839018:1:exon
so has part: feature:6840584-6840724:1:exon
so has part: feature:6840814-6840913:1:exon
so has part: feature:6841634-6841823:1:exon
so has part: feature:6843286-6843362:1:exon
so has part: feature:6846497-6846635:1:exon
so has part: feature:6851622-6851801:1:exon
so has part: feature:6853043-6853158:1:exon
so has part: feature:6860842-6861024:1:exon
so has part: feature:6861471-6861937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6810712-6810883:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6818105-6818191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6820353-6820437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6821799-6821856:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6822297-6822394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6824471-6824596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6825336-6825424:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6830057-6830145:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6831813-6831873:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6832134-6832313:1:exon

position:6832313:1
position: 6832313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6837490-6837570:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6838870-6839018:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6840584-6840724:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6840814-6840913:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6841634-6841823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6843286-6843362:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6846497-6846635:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6851622-6851801:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6853043-6853158:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6860842-6861024:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6861471-6861937:1:exon

GFM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: GFM2
product: G elongation factor mitochondrial 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018065537.1
SIO_010081: GFM2
subclass of: SO_0000673
so part of: GFM2
location: join(6810934..6811017,6818105..6818191,6820353..6820437,6821799..6821856,6822297..6822394,6824471..6824596,6825336..6825424,6830057..6830145,6831813..6831873,6832134..6832318,6836663..6836717,6837490..6837570,6838870..6839018,6840584..6840724,6840814..6840913,6841634..6841823,6843286..6843362,6846497..6846635,6851622..6851801,6853043..6853158,6860842..6861024,6861471..6861937)
location: region:6810934-6861937:1
so has part: feature:6810934-6811017:1:exon
so has part: feature:6818105-6818191:1:exon
so has part: feature:6820353-6820437:1:exon
so has part: feature:6821799-6821856:1:exon
so has part: feature:6822297-6822394:1:exon
so has part: feature:6824471-6824596:1:exon
so has part: feature:6825336-6825424:1:exon
so has part: feature:6830057-6830145:1:exon
so has part: feature:6831813-6831873:1:exon
so has part: feature:6832134-6832318:1:exon
so has part: feature:6836663-6836717:1:exon
so has part: feature:6837490-6837570:1:exon
so has part: feature:6838870-6839018:1:exon
so has part: feature:6840584-6840724:1:exon
so has part: feature:6840814-6840913:1:exon
so has part: feature:6841634-6841823:1:exon
so has part: feature:6843286-6843362:1:exon
so has part: feature:6846497-6846635:1:exon
so has part: feature:6851622-6851801:1:exon
so has part: feature:6853043-6853158:1:exon
so has part: feature:6860842-6861024:1:exon
so has part: feature:6861471-6861937:1:exon

position:6810934:1
position: 6810934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6810934-6811017:1:exon

position:6811017:1
position: 6811017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6818105-6818191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6820353-6820437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6821799-6821856:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6822297-6822394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6824471-6824596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6825336-6825424:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6830057-6830145:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6831813-6831873:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6832134-6832318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6836663-6836717:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6837490-6837570:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6838870-6839018:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6840584-6840724:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6840814-6840913:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6841634-6841823:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6843286-6843362:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6846497-6846635:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6851622-6851801:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6853043-6853158:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6860842-6861024:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6861471-6861937:1:exon

GFM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: GFM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome-releasing factor 2, mitochondrial isoform X1
translation: MSNLRIFAVNRKKISSLHYFNNMCSSKIRASLKRLKLHVLLGRNYSSLPGLMGNDIKSLHSIINPPIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTFDWKGYRINLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKVPRICFLNKMDKIGASFNYAVESIREKLKAKPLLLQLPIGEGKAFKGVVDIVSKEKLLWNPNSDDGKDFERKPLLEMSDPKLLKETTEARNALIEQVNLCLLALSLHCRAQAFSSWVADLDDEFADLVLGEFSENFDLLPAEKLQTALRRVTLAQTAVPVLCGSALKNKGVQPLLDAITMYLPSPEERNYEFLQWYKGDLCALAFKVLHDKQRGPLVFMRIYSGMIKPQTAIHNINGNCTERISRLLLPFADQHIEIPLLTAGNIALTVGLKHTATGDTIVSSKSSALAASRRARREGEKKQKENNETERLLLAGVEIPEPVFFCTIEPPSMAKQPDLDHALKCLQREDPSLKVKLDPDSGQTVLCGMGELHIEIIHDRIKREYGLETYLGPLQVAYREAILNSVRATDTLDRTLGDKRHLVTVELEAKPMETASLLPVIEYAASVAGDLSQASREAFENGVHSACLQGPLLGSPVQDVAVTLHSLVIHPGTSTTMISACVSRCLQKALKKADKQILEPLMNLEVTVSRDYLSPVLADLAQRRGNIQEIQSRQDNKVVIGFVPLAETMGYSTVLRTLTSGSATFALELSNYQAMNPQDQSTLLSQRHGLS
SIO_010081: GFM2
subclass of: SO_0000673
so part of: GFM2
location: join(6818129..6818191,6820353..6820437,6821799..6821856,6822297..6822394,6824471..6824596,6825336..6825424,6830057..6830145,6831813..6831873,6832134..6832318,6836663..6836717,6837490..6837570,6838870..6839018,6840584..6840724,6840814..6840913,6841634..6841823,6843286..6843362,6846497..6846635,6851622..6851801,6853043..6853158,6860842..6861024,6861471..6861599)
location: region:6818129-6861599:1
so has part: feature:6818129-6818191:1:exon
so has part: feature:6820353-6820437:1:exon
so has part: feature:6821799-6821856:1:exon
so has part: feature:6822297-6822394:1:exon
so has part: feature:6824471-6824596:1:exon
so has part: feature:6825336-6825424:1:exon
so has part: feature:6830057-6830145:1:exon
so has part: feature:6831813-6831873:1:exon
so has part: feature:6832134-6832318:1:exon
so has part: feature:6836663-6836717:1:exon
so has part: feature:6837490-6837570:1:exon
so has part: feature:6838870-6839018:1:exon
so has part: feature:6840584-6840724:1:exon
so has part: feature:6840814-6840913:1:exon
so has part: feature:6841634-6841823:1:exon
so has part: feature:6843286-6843362:1:exon
so has part: feature:6846497-6846635:1:exon
so has part: feature:6851622-6851801:1:exon
so has part: feature:6853043-6853158:1:exon
so has part: feature:6860842-6861024:1:exon
so has part: feature:6861471-6861599:1:exon

XP_017921025.1
type: Protein
SIO_000068: ncbiprotein

position:6818129:1
position: 6818129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6861599:1
position: 6861599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6818129-6818191:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6820353-6820437:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6821799-6821856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6822297-6822394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6824471-6824596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6825336-6825424:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6830057-6830145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6831813-6831873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6832134-6832318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6836663-6836717:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6837490-6837570:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6838870-6839018:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6840584-6840724:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6840814-6840913:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6841634-6841823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6843286-6843362:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6846497-6846635:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6851622-6851801:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6853043-6853158:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6860842-6861024:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6861471-6861599:1:exon

GFM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: GFM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome-releasing factor 2, mitochondrial isoform X1
translation: MSNLRIFAVNRKKISSLHYFNNMCSSKIRASLKRLKLHVLLGRNYSSLPGLMGNDIKSLHSIINPPIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTFDWKGYRINLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKVPRICFLNKMDKIGASFNYAVESIREKLKAKPLLLQLPIGEGKAFKGVVDIVSKEKLLWNPNSDDGKDFERKPLLEMSDPKLLKETTEARNALIEQVNLCLLALSLHCRAQAFSSWVADLDDEFADLVLGEFSENFDLLPAEKLQTALRRVTLAQTAVPVLCGSALKNKGVQPLLDAITMYLPSPEERNYEFLQWYKGDLCALAFKVLHDKQRGPLVFMRIYSGMIKPQTAIHNINGNCTERISRLLLPFADQHIEIPLLTAGNIALTVGLKHTATGDTIVSSKSSALAASRRARREGEKKQKENNETERLLLAGVEIPEPVFFCTIEPPSMAKQPDLDHALKCLQREDPSLKVKLDPDSGQTVLCGMGELHIEIIHDRIKREYGLETYLGPLQVAYREAILNSVRATDTLDRTLGDKRHLVTVELEAKPMETASLLPVIEYAASVAGDLSQASREAFENGVHSACLQGPLLGSPVQDVAVTLHSLVIHPGTSTTMISACVSRCLQKALKKADKQILEPLMNLEVTVSRDYLSPVLADLAQRRGNIQEIQSRQDNKVVIGFVPLAETMGYSTVLRTLTSGSATFALELSNYQAMNPQDQSTLLSQRHGLS
SIO_010081: GFM2
subclass of: SO_0000673
so part of: GFM2
location: join(6818129..6818191,6820353..6820437,6821799..6821856,6822297..6822394,6824471..6824596,6825336..6825424,6830057..6830145,6831813..6831873,6832134..6832318,6836663..6836717,6837490..6837570,6838870..6839018,6840584..6840724,6840814..6840913,6841634..6841823,6843286..6843362,6846497..6846635,6851622..6851801,6853043..6853158,6860842..6861024,6861471..6861599)
location: region:6818129-6861599:1
so has part: feature:6818129-6818191:1:exon
so has part: feature:6820353-6820437:1:exon
so has part: feature:6821799-6821856:1:exon
so has part: feature:6822297-6822394:1:exon
so has part: feature:6824471-6824596:1:exon
so has part: feature:6825336-6825424:1:exon
so has part: feature:6830057-6830145:1:exon
so has part: feature:6831813-6831873:1:exon
so has part: feature:6832134-6832318:1:exon
so has part: feature:6836663-6836717:1:exon
so has part: feature:6837490-6837570:1:exon
so has part: feature:6838870-6839018:1:exon
so has part: feature:6840584-6840724:1:exon
so has part: feature:6840814-6840913:1:exon
so has part: feature:6841634-6841823:1:exon
so has part: feature:6843286-6843362:1:exon
so has part: feature:6846497-6846635:1:exon
so has part: feature:6851622-6851801:1:exon
so has part: feature:6853043-6853158:1:exon
so has part: feature:6860842-6861024:1:exon
so has part: feature:6861471-6861599:1:exon

XP_017921026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6818129-6818191:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6820353-6820437:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6821799-6821856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6822297-6822394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6824471-6824596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6825336-6825424:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6830057-6830145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6831813-6831873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6832134-6832318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6836663-6836717:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6837490-6837570:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6838870-6839018:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6840584-6840724:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6840814-6840913:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6841634-6841823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6843286-6843362:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6846497-6846635:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6851622-6851801:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6853043-6853158:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6860842-6861024:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6861471-6861599:1:exon

GFM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: GFM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome-releasing factor 2, mitochondrial isoform X2
translation: MSNLRIFAVNRKKISSLHYFNNMCSSKIRASLKRLKLHVLLGRNYSSLPGLMGNDIKSLHSIINPPIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTFDWKGYRINLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKVPRICFLNKMDKIGASFNYAVESIREKLKAKPLLLQLPIGEGKAFKGVVDIVSKEKLLWNPNSDDGKDFERKPLLEMSDPKLLKETTEARNALIEQVADLDDEFADLVLGEFSENFDLLPAEKLQTALRRVTLAQTAVPVLCGSALKNKGVQPLLDAITMYLPSPEERNYEFLQWYKGDLCALAFKVLHDKQRGPLVFMRIYSGMIKPQTAIHNINGNCTERISRLLLPFADQHIEIPLLTAGNIALTVGLKHTATGDTIVSSKSSALAASRRARREGEKKQKENNETERLLLAGVEIPEPVFFCTIEPPSMAKQPDLDHALKCLQREDPSLKVKLDPDSGQTVLCGMGELHIEIIHDRIKREYGLETYLGPLQVAYREAILNSVRATDTLDRTLGDKRHLVTVELEAKPMETASLLPVIEYAASVAGDLSQASREAFENGVHSACLQGPLLGSPVQDVAVTLHSLVIHPGTSTTMISACVSRCLQKALKKADKQILEPLMNLEVTVSRDYLSPVLADLAQRRGNIQEIQSRQDNKVVIGFVPLAETMGYSTVLRTLTSGSATFALELSNYQAMNPQDQSTLLSQRHGLS
SIO_010081: GFM2
subclass of: SO_0000673
so part of: GFM2
location: join(6818129..6818191,6820353..6820437,6821799..6821856,6822297..6822394,6824471..6824596,6825336..6825424,6830057..6830145,6831813..6831873,6832134..6832313,6837490..6837570,6838870..6839018,6840584..6840724,6840814..6840913,6841634..6841823,6843286..6843362,6846497..6846635,6851622..6851801,6853043..6853158,6860842..6861024,6861471..6861599)
location: region:6818129-6861599:1
so has part: feature:6818129-6818191:1:exon
so has part: feature:6820353-6820437:1:exon
so has part: feature:6821799-6821856:1:exon
so has part: feature:6822297-6822394:1:exon
so has part: feature:6824471-6824596:1:exon
so has part: feature:6825336-6825424:1:exon
so has part: feature:6830057-6830145:1:exon
so has part: feature:6831813-6831873:1:exon
so has part: feature:6832134-6832313:1:exon
so has part: feature:6837490-6837570:1:exon
so has part: feature:6838870-6839018:1:exon
so has part: feature:6840584-6840724:1:exon
so has part: feature:6840814-6840913:1:exon
so has part: feature:6841634-6841823:1:exon
so has part: feature:6843286-6843362:1:exon
so has part: feature:6846497-6846635:1:exon
so has part: feature:6851622-6851801:1:exon
so has part: feature:6853043-6853158:1:exon
so has part: feature:6860842-6861024:1:exon
so has part: feature:6861471-6861599:1:exon

XP_017921027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6818129-6818191:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6820353-6820437:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6821799-6821856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6822297-6822394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6824471-6824596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6825336-6825424:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6830057-6830145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6831813-6831873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6832134-6832313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6837490-6837570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6838870-6839018:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6840584-6840724:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6840814-6840913:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6841634-6841823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6843286-6843362:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6846497-6846635:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6851622-6851801:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6853043-6853158:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6860842-6861024:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6861471-6861599:1:exon

HEXB
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: HEXB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6861906..6894141)
location: region:6861906-6894141:-1
so has part: feature:6861906-6894141:-1:exon
subclass of: SO_0000010

102181720
type: Gene
SIO_000068: ncbigene

position:6861906:-1
position: 6861906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6894141:-1
position: 6894141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6861906-6894141:-1:exon

HEXB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: HEXB
product: hexosaminidase subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 46 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_018065541.1
SIO_010081: HEXB
subclass of: SO_0000673
so part of: HEXB
location: complement(join(6861906..6862078,6862375..6862479,6862624..6862714,6864085..6864259,6865048..6865120,6867409..6867495,6868114..6868294,6869961..6870090,6871917..6872018,6875533..6875643,6875904..6875950,6881482..6881547,6886910..6887055,6893764..6894141))
location: region:6861906-6894141:-1
so has part: feature:6893764-6894141:-1:exon
so has part: feature:6886910-6887055:-1:exon
so has part: feature:6881482-6881547:-1:exon
so has part: feature:6875904-6875950:-1:exon
so has part: feature:6875533-6875643:-1:exon
so has part: feature:6871917-6872018:-1:exon
so has part: feature:6869961-6870090:-1:exon
so has part: feature:6868114-6868294:-1:exon
so has part: feature:6867409-6867495:-1:exon
so has part: feature:6865048-6865120:-1:exon
so has part: feature:6864085-6864259:-1:exon
so has part: feature:6862624-6862714:-1:exon
so has part: feature:6862375-6862479:-1:exon
so has part: feature:6861906-6862078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6893764-6894141:-1:exon

position:6893764:-1
position: 6893764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6886910-6887055:-1:exon

position:6886910:-1
position: 6886910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6887055:-1
position: 6887055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6881482-6881547:-1:exon

position:6881482:-1
position: 6881482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6881547:-1
position: 6881547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6875904-6875950:-1:exon

position:6875904:-1
position: 6875904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6875950:-1
position: 6875950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6875533-6875643:-1:exon

position:6875533:-1
position: 6875533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6875643:-1
position: 6875643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6871917-6872018:-1:exon

position:6871917:-1
position: 6871917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6872018:-1
position: 6872018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6869961-6870090:-1:exon

position:6869961:-1
position: 6869961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6870090:-1
position: 6870090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6868114-6868294:-1:exon

position:6868114:-1
position: 6868114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6868294:-1
position: 6868294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6867409-6867495:-1:exon

position:6867409:-1
position: 6867409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6867495:-1
position: 6867495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6865048-6865120:-1:exon

position:6865048:-1
position: 6865048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6865120:-1
position: 6865120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6864085-6864259:-1:exon

position:6864085:-1
position: 6864085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6864259:-1
position: 6864259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6862624-6862714:-1:exon

position:6862624:-1
position: 6862624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6862714:-1
position: 6862714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6862375-6862479:-1:exon

position:6862375:-1
position: 6862375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6862479:-1
position: 6862479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6861906-6862078:-1:exon

position:6862078:-1
position: 6862078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HEXB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: HEXB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-hexosaminidase subunit beta
translation: MEQRGLGRLRLPGLLALLAALAALAAWSPRVSASRNLSLWPLPVTVRTTPRLLYLSPGNFFFGHSPTSKTGPSCAVLQEAFRRYYAYIFGTYKWHRGYNKIPSEMELQKLEVSVIMDPECDSFPSITSDESYNLLVQGPVATLTANRVWGVLRGLETFSQLIYQDSYGAFTANESNIVDSPRFPHRGILIDTSRHFLPVKTILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVYTPNDVRTVIEYARFRGIRVLPEFDSPGHTASWGKGQKDILTPCYHASEPSGTFGPINPILNSTYSFLSKLFKEISTVFPDEFIHLGGDEVDFNCWESNPAVLNFMMNKGFDRNFKKLQSFYMQMVLDMISAMKKRSIIWQEVYDDEGKLIPGTVVQVWKMDNFYNELGNITAAGFPVIISAPWYLDTIHYGQDWRQYYSVEPLNFAGTPEQKQLVIGGEACIWGEYVDATNLTPRLWPRASAVGERLWSHQDVTDLEDAYRRLIRHRCRMVRRGIAAQPLFTGYCEHEGRM
SIO_010081: HEXB
subclass of: SO_0000673
so part of: HEXB
location: complement(join(6862018..6862078,6862375..6862479,6862624..6862714,6864085..6864259,6865048..6865120,6867409..6867495,6868114..6868294,6869961..6870090,6871917..6872018,6875533..6875643,6875904..6875950,6881482..6881547,6886910..6887055,6893764..6894011))
location: region:6862018-6894011:-1
so has part: feature:6893764-6894011:-1:exon
so has part: feature:6886910-6887055:-1:exon
so has part: feature:6881482-6881547:-1:exon
so has part: feature:6875904-6875950:-1:exon
so has part: feature:6875533-6875643:-1:exon
so has part: feature:6871917-6872018:-1:exon
so has part: feature:6869961-6870090:-1:exon
so has part: feature:6868114-6868294:-1:exon
so has part: feature:6867409-6867495:-1:exon
so has part: feature:6865048-6865120:-1:exon
so has part: feature:6864085-6864259:-1:exon
so has part: feature:6862624-6862714:-1:exon
so has part: feature:6862375-6862479:-1:exon
so has part: feature:6862018-6862078:-1:exon

XP_017921030.1
type: Protein
SIO_000068: ncbiprotein

position:6862018:-1
position: 6862018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6894011:-1
position: 6894011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6893764-6894011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6886910-6887055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6881482-6881547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6875904-6875950:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6875533-6875643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6871917-6872018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6869961-6870090:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6868114-6868294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6867409-6867495:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6865048-6865120:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6864085-6864259:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6862624-6862714:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6862375-6862479:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6862018-6862078:-1:exon

LOC102181993
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102181993
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6897089..6929222
location: region:6897089-6929222:1
so has part: feature:6897089-6929222:1:exon
subclass of: SO_0000010

102181993
type: Gene
SIO_000068: ncbigene

position:6897089:1
position: 6897089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6929222:1
position: 6929222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6897089-6929222:1:exon

LOC102181993
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102181993
product: beta-hexosaminidase subunit beta
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018065761.1
SIO_010081: LOC102181993
subclass of: SO_0000673
so part of: LOC102181993
location: join(6897089..6897406,6903657..6903803,6909152..6909217,6915460..6915506,6915769..6915879,6919440..6919541,6921393..6921522,6923886..6924066,6925054..6925140,6926366..6926438,6927245..6927419,6928396..6928486,6928631..6928735,6929037..6929222)
location: region:6897089-6929222:1
so has part: feature:6897089-6897406:1:exon
so has part: feature:6903657-6903803:1:exon
so has part: feature:6909152-6909217:1:exon
so has part: feature:6915460-6915506:1:exon
so has part: feature:6915769-6915879:1:exon
so has part: feature:6919440-6919541:1:exon
so has part: feature:6921393-6921522:1:exon
so has part: feature:6923886-6924066:1:exon
so has part: feature:6925054-6925140:1:exon
so has part: feature:6926366-6926438:1:exon
so has part: feature:6927245-6927419:1:exon
so has part: feature:6928396-6928486:1:exon
so has part: feature:6928631-6928735:1:exon
so has part: feature:6929037-6929222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6897089-6897406:1:exon

position:6897406:1
position: 6897406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6903657-6903803:1:exon

position:6903657:1
position: 6903657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6903803:1
position: 6903803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6909152-6909217:1:exon

position:6909152:1
position: 6909152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6909217:1
position: 6909217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6915460-6915506:1:exon

position:6915460:1
position: 6915460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6915506:1
position: 6915506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6915769-6915879:1:exon

position:6915769:1
position: 6915769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6915879:1
position: 6915879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6919440-6919541:1:exon

position:6919440:1
position: 6919440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6919541:1
position: 6919541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6921393-6921522:1:exon

position:6921393:1
position: 6921393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6921522:1
position: 6921522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6923886-6924066:1:exon

position:6923886:1
position: 6923886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6924066:1
position: 6924066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6925054-6925140:1:exon

position:6925054:1
position: 6925054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6925140:1
position: 6925140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6926366-6926438:1:exon

position:6926366:1
position: 6926366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6926438:1
position: 6926438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6927245-6927419:1:exon

position:6927245:1
position: 6927245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6927419:1
position: 6927419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6928396-6928486:1:exon

position:6928396:1
position: 6928396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6928486:1
position: 6928486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6928631-6928735:1:exon

position:6928631:1
position: 6928631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6928735:1
position: 6928735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6929037-6929222:1:exon

position:6929037:1
position: 6929037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102181993
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102181993
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: beta-hexosaminidase subunit beta
translation: MEQRGLGRLRLPGLLALLAALGVLVVQAALGRRRAQTPRISASRNQNLWPLPVTVRTTPRLLYLSPGNFFFGHSPTSKAGPSCAVLQEAFRRYYAYIFGFDKWPLGSDNVPRKMELQKLEVSVIMDPECDSFPSITSDESYNLLVQEPVAKLTANRVWGVLRGLETFSQLIYQHSSGTFTANESNIVDSPRFPHRGILIDTSRHFLPIKTILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVYTPNDVRTVIEYARFRGIRVLPEFDSPGHTASWGKGQKDVLTPCYHSREPSGTFGPINPILNSTYSFLSKLFKEISTVFPDKFIHLGGDEVDFHCWKSNPAVLHFMRNKGFGKKFEKLQSFYMQKVLDMISAMKKTSIVWQEVFDDEGKLTPGTVVQVWKKRNFHMKLRKITAAGFPVIISAPWYLDLISYGEDWTGYYLVEPLNFAGTPEQKQLVIGGEACIWGEYVDATNLTPRLWPRASAVGERLWSHQDVTDLEDAYRRLIRHRCRMVGRGIAAQPLLPGYCEHEGRM
SIO_010081: LOC102181993
subclass of: SO_0000673
so part of: LOC102181993
location: join(6897132..6897406,6903657..6903803,6909152..6909217,6915460..6915506,6915769..6915879,6919440..6919541,6921393..6921522,6923886..6924066,6925054..6925140,6926366..6926438,6927245..6927419,6928396..6928486,6928631..6928735,6929037..6929097)
location: region:6897132-6929097:1
so has part: feature:6897132-6897406:1:exon
so has part: feature:6903657-6903803:1:exon
so has part: feature:6909152-6909217:1:exon
so has part: feature:6915460-6915506:1:exon
so has part: feature:6915769-6915879:1:exon
so has part: feature:6919440-6919541:1:exon
so has part: feature:6921393-6921522:1:exon
so has part: feature:6923886-6924066:1:exon
so has part: feature:6925054-6925140:1:exon
so has part: feature:6926366-6926438:1:exon
so has part: feature:6927245-6927419:1:exon
so has part: feature:6928396-6928486:1:exon
so has part: feature:6928631-6928735:1:exon
so has part: feature:6929037-6929097:1:exon

XP_017921250.1
type: Protein
SIO_000068: ncbiprotein

position:6897132:1
position: 6897132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6929097:1
position: 6929097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6897132-6897406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6903657-6903803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6909152-6909217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6915460-6915506:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6915769-6915879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6919440-6919541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6921393-6921522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6923886-6924066:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6925054-6925140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6926366-6926438:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6927245-6927419:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6928396-6928486:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6928631-6928735:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6929037-6929097:1:exon

LOC108638410
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108638410
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6929175..6930261)
location: region:6929175-6930261:-1
so has part: feature:6929175-6930261:-1:exon
subclass of: SO_0000011

108638410
type: Gene
SIO_000068: ncbigene

position:6929175:-1
position: 6929175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6930261:-1
position: 6930261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6929175-6930261:-1:exon

LOC108638410
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108638410
product: uncharacterized LOC108638410
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_001919800.1
SIO_010081: LOC108638410
subclass of: SO_0000673
so part of: LOC108638410
location: complement(join(6929175..6929644,6930083..6930261))
location: region:6929175-6930261:-1
so has part: feature:6930083-6930261:-1:exon
so has part: feature:6929175-6929644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6930083-6930261:-1:exon

position:6930083:-1
position: 6930083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6929175-6929644:-1:exon

position:6929644:-1
position: 6929644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ENC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ENC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6969403..6982905
location: region:6969403-6982905:1
so has part: feature:6969403-6982905:1:exon
subclass of: SO_0000010

102171099
type: Gene
SIO_000068: ncbigene

position:6969403:1
position: 6969403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6982905:1
position: 6982905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6969403-6982905:1:exon

ENC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ENC1
product: ectodermal-neural cortex 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 95 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005694551.3
SIO_010081: ENC1
subclass of: SO_0000673
so part of: ENC1
location: join(6969403..6969749,6974480..6976292,6980299..6982905)
location: region:6969403-6982905:1
so has part: feature:6969403-6969749:1:exon
so has part: feature:6974480-6976292:1:exon
so has part: feature:6980299-6982905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6969403-6969749:1:exon

position:6969749:1
position: 6969749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6974480-6976292:1:exon

position:6974480:1
position: 6974480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6976292:1
position: 6976292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6980299-6982905:1:exon

position:6980299:1
position: 6980299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ENC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ENC1
product: ectodermal-neural cortex 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 97 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_018065676.1
SIO_010081: ENC1
subclass of: SO_0000673
so part of: ENC1
location: join(6970196..6970640,6974480..6976292,6980299..6982905)
location: region:6970196-6982905:1
so has part: feature:6970196-6970640:1:exon
so has part: feature:6974480-6976292:1:exon
so has part: feature:6980299-6982905:1:exon

position:6970196:1
position: 6970196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6970196-6970640:1:exon

position:6970640:1
position: 6970640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6974480-6976292:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6980299-6982905:1:exon

ENC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ENC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectoderm-neural cortex protein 1
translation: MSVSVHENRKSRASSGSINIYLFHKSSYADSVLTHLNLLRQQRLFTDVLLHAGNRTFPCHRAVLAACSRYFEAMFSGGLKESQDSEVNFDNSIHPEVLELLLDYAYSSRVIINEENAESLLEAGDMLEFQDIRDACAEFLEKNLHPTNCLGMLLLSDAHQCTKLYELSWRMCLSNFQTIRKNEDFLQLPQDMVVQLLSSEELETEDERLVYESAINWISYDLKKRYCYLPELLQTVRLALLPAIYLMENVAMEELITKQRKSKEIVEEAIRCKLKILQNDGVVTSLCARPRKTGHALFLLGGQTFMCDKLYLVDQKAKEIIPKADIPSPRKEFSACAIGCKVYITGGRGSENGVSKDVWVYDTLHEEWSKAAPMLVARFGHGSAELKHCLYVVGGHTAATGCLPASPSVSLKQVEHYDPTTNKWTMVAPLREGVSNAAVVSAKLKLFAFGGTSVSHDKLPKVQCYDQCENRWTVPATCPQPWRYTAAAVLGNQIFIMGGDTEFSACSAYKFNSETYQWTKVGDVTAKRMSCHAVASGNKLYVVGGYFGIQRCKTLDCYDPTLDAWNSITTVPYSLIPTAFVSTWKHLPS
SIO_010081: ENC1
subclass of: SO_0000673
so part of: ENC1
location: 6974491..6976260
location: region:6974491-6976260:1
so has part: feature:6974491-6976260:1:exon

XP_017921165.1
type: Protein
SIO_000068: ncbiprotein

position:6974491:1
position: 6974491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6976260:1
position: 6976260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6974491-6976260:1:exon

ENC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ENC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectoderm-neural cortex protein 1
translation: MSVSVHENRKSRASSGSINIYLFHKSSYADSVLTHLNLLRQQRLFTDVLLHAGNRTFPCHRAVLAACSRYFEAMFSGGLKESQDSEVNFDNSIHPEVLELLLDYAYSSRVIINEENAESLLEAGDMLEFQDIRDACAEFLEKNLHPTNCLGMLLLSDAHQCTKLYELSWRMCLSNFQTIRKNEDFLQLPQDMVVQLLSSEELETEDERLVYESAINWISYDLKKRYCYLPELLQTVRLALLPAIYLMENVAMEELITKQRKSKEIVEEAIRCKLKILQNDGVVTSLCARPRKTGHALFLLGGQTFMCDKLYLVDQKAKEIIPKADIPSPRKEFSACAIGCKVYITGGRGSENGVSKDVWVYDTLHEEWSKAAPMLVARFGHGSAELKHCLYVVGGHTAATGCLPASPSVSLKQVEHYDPTTNKWTMVAPLREGVSNAAVVSAKLKLFAFGGTSVSHDKLPKVQCYDQCENRWTVPATCPQPWRYTAAAVLGNQIFIMGGDTEFSACSAYKFNSETYQWTKVGDVTAKRMSCHAVASGNKLYVVGGYFGIQRCKTLDCYDPTLDAWNSITTVPYSLIPTAFVSTWKHLPS
SIO_010081: ENC1
subclass of: SO_0000673
so part of: ENC1
location: 6974491..6976260
location: region:6974491-6976260:1
so has part: feature:6974491-6976260:1:exon

XP_005694608.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6974491-6976260:1:exon

TRNAR-UCG
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAR-UCG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(7501523..7501595)
location: region:7501523-7501595:-1
so has part: feature:7501523-7501595:-1:exon
subclass of: SO_0000663

108638431
type: Gene
SIO_000068: ncbigene

position:7501523:-1
position: 7501523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7501595:-1
position: 7501595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7501523-7501595:-1:exon

TRNAR-UCG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAR-UCG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCG); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(7501560..7501562),aa:Arg, seq:tcg)
SIO_010081: TRNAR-UCG
subclass of: SO_0000673
so part of: TRNAR-UCG
location: complement(7501523..7501595)
location: region:7501523-7501595:-1
so has part: feature:7501523-7501595:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7501523-7501595:-1:exon

ARHGEF28
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ARHGEF28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7708446..8053019)
location: region:7708446-8053019:-1
so has part: feature:7708446-8053019:-1:exon
subclass of: SO_0000010

102171549
type: Gene
SIO_000068: ncbigene

position:7708446:-1
position: 7708446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8053019:-1
position: 8053019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7708446-8053019:-1:exon

ARHGEF28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF28
product: Rho guanine nucleotide exchange factor 28, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018065570.1
SIO_010081: ARHGEF28
subclass of: SO_0000673
so part of: ARHGEF28
location: complement(join(7708446..7709770,7749525..7749825,7751077..7751559,7756042..7756089,7756188..7756226,7759122..7759222,7762147..7762278,7766737..7766919,7768418..7768509,7769521..7769699,7773061..7773137,7774013..7774267,7777373..7777490,7778654..7778776,7784226..7784473,7788119..7788259,7789480..7789607,7789684..7789828,7799995..7800127,7800475..7800598,7805573..7805615,7810078..7810189,7814217..7814424,7817659..7817993,7822515..7822633,7866508..7866568,7867142..7867194,7881618..7881687,7887873..7888053,7891801..7891984,7913262..7913555,7916234..7916381,7986656..7986699,8052895..8053019))
location: region:7708446-8053019:-1
so has part: feature:8052895-8053019:-1:exon
so has part: feature:7986656-7986699:-1:exon
so has part: feature:7916234-7916381:-1:exon
so has part: feature:7913262-7913555:-1:exon
so has part: feature:7891801-7891984:-1:exon
so has part: feature:7887873-7888053:-1:exon
so has part: feature:7881618-7881687:-1:exon
so has part: feature:7867142-7867194:-1:exon
so has part: feature:7866508-7866568:-1:exon
so has part: feature:7822515-7822633:-1:exon
so has part: feature:7817659-7817993:-1:exon
so has part: feature:7814217-7814424:-1:exon
so has part: feature:7810078-7810189:-1:exon
so has part: feature:7805573-7805615:-1:exon
so has part: feature:7800475-7800598:-1:exon
so has part: feature:7799995-7800127:-1:exon
so has part: feature:7789684-7789828:-1:exon
so has part: feature:7789480-7789607:-1:exon
so has part: feature:7788119-7788259:-1:exon
so has part: feature:7784226-7784473:-1:exon
so has part: feature:7778654-7778776:-1:exon
so has part: feature:7777373-7777490:-1:exon
so has part: feature:7774013-7774267:-1:exon
so has part: feature:7773061-7773137:-1:exon
so has part: feature:7769521-7769699:-1:exon
so has part: feature:7768418-7768509:-1:exon
so has part: feature:7766737-7766919:-1:exon
so has part: feature:7762147-7762278:-1:exon
so has part: feature:7759122-7759222:-1:exon
so has part: feature:7756188-7756226:-1:exon
so has part: feature:7756042-7756089:-1:exon
so has part: feature:7751077-7751559:-1:exon
so has part: feature:7749525-7749825:-1:exon
so has part: feature:7708446-7709770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8052895-8053019:-1:exon

position:8052895:-1
position: 8052895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7986656-7986699:-1:exon

position:7986656:-1
position: 7986656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7986699:-1
position: 7986699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7916234-7916381:-1:exon

position:7916234:-1
position: 7916234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7916381:-1
position: 7916381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7913262-7913555:-1:exon

position:7913262:-1
position: 7913262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7913555:-1
position: 7913555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7891801-7891984:-1:exon

position:7891801:-1
position: 7891801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7891984:-1
position: 7891984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7887873-7888053:-1:exon

position:7887873:-1
position: 7887873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7888053:-1
position: 7888053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7881618-7881687:-1:exon

position:7881618:-1
position: 7881618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7881687:-1
position: 7881687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7867142-7867194:-1:exon

position:7867142:-1
position: 7867142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7867194:-1
position: 7867194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7866508-7866568:-1:exon

position:7866508:-1
position: 7866508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7866568:-1
position: 7866568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7822515-7822633:-1:exon

position:7822515:-1
position: 7822515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7822633:-1
position: 7822633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7817659-7817993:-1:exon

position:7817659:-1
position: 7817659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7817993:-1
position: 7817993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7814217-7814424:-1:exon

position:7814217:-1
position: 7814217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7814424:-1
position: 7814424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7810078-7810189:-1:exon

position:7810078:-1
position: 7810078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7810189:-1
position: 7810189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7805573-7805615:-1:exon

position:7805573:-1
position: 7805573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7805615:-1
position: 7805615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7800475-7800598:-1:exon

position:7800475:-1
position: 7800475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7800598:-1
position: 7800598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7799995-7800127:-1:exon

position:7799995:-1
position: 7799995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7800127:-1
position: 7800127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7789684-7789828:-1:exon

position:7789684:-1
position: 7789684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7789828:-1
position: 7789828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
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SIO_000628: feature:7788119-7788259:-1:exon

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SIO_000300: 34
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ARHGEF28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF28
product: Rho guanine nucleotide exchange factor 28, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018065568.1
SIO_010081: ARHGEF28
subclass of: SO_0000673
so part of: ARHGEF28
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urn:…
SIO_000300: 1
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SIO_000300: 17
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urn:…
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urn:…
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SIO_000628: feature:7749525-7749825:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7708446-7709770:-1:exon

ARHGEF28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF28
product: Rho guanine nucleotide exchange factor 28, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018065569.1
SIO_010081: ARHGEF28
subclass of: SO_0000673
so part of: ARHGEF28
location: complement(join(7708446..7709770,7749525..7749825,7751077..7751559,7756042..7756089,7756188..7756226,7759122..7759222,7762147..7762278,7766737..7766919,7768418..7768509,7769521..7769699,7773061..7773137,7774013..7774267,7777373..7777490,7778654..7778776,7784226..7784473,7788119..7788259,7789480..7789607,7789684..7789828,7792186..7792234,7793287..7793342,7799995..7800127,7800475..7800598,7805573..7805615,7810078..7810189,7814217..7814424,7817659..7817993,7822515..7822633,7866508..7866568,7867142..7867194,7881618..7881687,7887873..7888053,7891801..7891984,7913262..7913555,7916234..7916381,7969967..7970152))
location: region:7708446-7970152:-1
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position:7970152:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:7969967-7970152:-1:exon

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urn:…
SIO_000300: 35
SIO_000628: feature:7708446-7709770:-1:exon

ARHGEF28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF28
product: Rho guanine nucleotide exchange factor 28, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_018065571.1
SIO_010081: ARHGEF28
subclass of: SO_0000673
so part of: ARHGEF28
location: complement(join(7708446..7709770,7749525..7749825,7751077..7751559,7756042..7756089,7756188..7756226,7759122..7759222,7762147..7762278,7766737..7766919,7768418..7768509,7769521..7769699,7773061..7773137,7774013..7774267,7777373..7777490,7778654..7778776,7784226..7784473,7788119..7788259,7789480..7789607,7789684..7789828,7792186..7792234,7793287..7793342,7799995..7800127,7800475..7800598,7805573..7805615,7810078..7810189,7814217..7814424,7817659..7817993,7822515..7822633,7843596..7844308))
location: region:7708446-7844308:-1
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position:7844308:-1
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 5
SIO_000628: feature:7810078-7810189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7805573-7805615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7800475-7800598:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7799995-7800127:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7793287-7793342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7792186-7792234:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7789684-7789828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7789480-7789607:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7788119-7788259:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7784226-7784473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7778654-7778776:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7777373-7777490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7774013-7774267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7773061-7773137:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7769521-7769699:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7768418-7768509:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7766737-7766919:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7762147-7762278:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7759122-7759222:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7756188-7756226:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7756042-7756089:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7751077-7751559:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7749525-7749825:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7708446-7709770:-1:exon

ARHGEF28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF28
product: Rho guanine nucleotide exchange factor 28, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018065572.1
SIO_010081: ARHGEF28
subclass of: SO_0000673
so part of: ARHGEF28
location: complement(join(7708446..7709770,7749525..7749825,7751077..7751559,7756042..7756089,7756188..7756226,7759122..7759222,7762147..7762278,7766737..7766919,7768418..7768509,7769521..7769699,7773061..7773137,7774013..7774267,7777373..7777490,7778654..7778776,7784226..7784473,7788119..7788259,7789480..7789607,7789684..7789828,7792186..7792234,7793287..7793342,7799995..7800127,7800475..7800598,7805573..7805615,7810078..7810189,7814217..7814424,7817659..7817993,7822515..7822633,7841896..7842014))
location: region:7708446-7842014:-1
so has part: feature:7841896-7842014:-1:exon
so has part: feature:7822515-7822633:-1:exon
so has part: feature:7817659-7817993:-1:exon
so has part: feature:7814217-7814424:-1:exon
so has part: feature:7810078-7810189:-1:exon
so has part: feature:7805573-7805615:-1:exon
so has part: feature:7800475-7800598:-1:exon
so has part: feature:7799995-7800127:-1:exon
so has part: feature:7793287-7793342:-1:exon
so has part: feature:7792186-7792234:-1:exon
so has part: feature:7789684-7789828:-1:exon
so has part: feature:7789480-7789607:-1:exon
so has part: feature:7788119-7788259:-1:exon
so has part: feature:7784226-7784473:-1:exon
so has part: feature:7778654-7778776:-1:exon
so has part: feature:7777373-7777490:-1:exon
so has part: feature:7774013-7774267:-1:exon
so has part: feature:7773061-7773137:-1:exon
so has part: feature:7769521-7769699:-1:exon
so has part: feature:7768418-7768509:-1:exon
so has part: feature:7766737-7766919:-1:exon
so has part: feature:7762147-7762278:-1:exon
so has part: feature:7759122-7759222:-1:exon
so has part: feature:7756188-7756226:-1:exon
so has part: feature:7756042-7756089:-1:exon
so has part: feature:7751077-7751559:-1:exon
so has part: feature:7749525-7749825:-1:exon
so has part: feature:7708446-7709770:-1:exon

position:7842014:-1
position: 7842014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7841896-7842014:-1:exon

position:7841896:-1
position: 7841896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7822515-7822633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7817659-7817993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7814217-7814424:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7810078-7810189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7805573-7805615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7800475-7800598:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7799995-7800127:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7793287-7793342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7792186-7792234:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7789684-7789828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7789480-7789607:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7788119-7788259:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7784226-7784473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7778654-7778776:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7777373-7777490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7774013-7774267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7773061-7773137:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7769521-7769699:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7768418-7768509:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7766737-7766919:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7762147-7762278:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7759122-7759222:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7756188-7756226:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7756042-7756089:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7751077-7751559:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7749525-7749825:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7708446-7709770:-1:exon

ARHGEF28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 28 isoform X3
translation: MELNCSEVPLYGQMTVCAKFGKNVYLPKDAEFYFIYNGSHQRHIVIAERTEDNVLQSSIPGHGLQETVTVSVCLCSEGYSPVTMGSDSVTYVDNMACRLARLLVTQADRLTASSHQTLLTPFALTAGALPALDEELVLALTHLELPLGWTVLGNSSLEVSLHRESLLHLAVRWGLTKLSQLLLCLPGGAQALTLPNEEGATPLDLALRGGHSKLVEDITNFQGRRSPGFFRVQLSEDASLRYIHSSETLTLTLNHTAEHLLEADIKLFRKYFWDRAFLIKALEDQEATSEKPDMPSSAAETEEEIKNSGCSGSSPRKEDVKRVKSPVVPLNEHEDPDRLDLDRSFDALKKSKHPPFLAAGQLSDMLNGGDEIYANCMVIDQVGDLDINYINIEGIPANTCLESMDSSLGPESSKAILPAEARAGTHPPSKDTEVTSHTEASAGTHPPSKSTEVTSHTEAQAPFVSSSSYASNLNLSFGPRGFEKEQSRLKKRSSSLDALDADSEGEGHSEQLHNCYTPVCQSSSRTGITSGDESDSFETNTESDFNISRTESFSLSSSLQLKESLFSGIRSRSYSCSSPKISLGKTRLIRDFTVCNSVEEQRAYSLPEPPRENRIQEEEWDKYIIPAKSESEKYKVSRTFSFFMNRMTSPRNKAKTKGKDAKDKEKLTRHQFVPGTFSGVLQCLVCDKTLLGKESFQCSSSSFRDVPPPGLSLHPSSSMPIGLPTGRKEMAGQVHPLSRSVPGTSMESSRRPGASLESENDGSTWRSRSHSDEMLQPMGSSPSTDSFLTEDVVDSSLWSDLSGDAQEFEAESWSLVVDPSFCSQQEKDVIQRQDVIFELMQTEMHHIQTLFIMSEIFRKGMKEELQLDHSTVDKIFPCLDELLEIHKHFFYSMKERRQESCVGNDRNFIINRIGDILVQQFSEENANKMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKESTEEQRDLCKALCLIKDMIAAVDLKVSEYEKKQKWLEILNKIENKTYTKLKNGHVFRKQALMSKERTLLYDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVESCPEEEGGRTSESDEERRKAEARVAKIQQCQEMLSNQDQQICTYLEEKLHIYAKLGELSGYQDVHLEPHLLIQTDPGEPPQAASLLAAALKEAESLQVAVKASQMSDACQSPEEGCGEPALPDVLNSQDAPGLSTASLVTEGTGGRGCWDVDAGTQGVGTDLAVSDAGEKVEYRSFPGSLQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHRLVLQQRDSLAPGPAFRGSPFQDQKSRSLEKQQEELADTHKLQLQFQQDQHRWLRRCDQQQREQEARASRLQERERECRAQEELLLRSRGELDQQLQDYQQSLERLREGQRLVERERERMRAQQSLLHHWKHGRQSSLPAAFSPGTLEVMELNQSETLCHENSFFFNEALVQMSVNPLNKLTPPDIHQDAAHPPGVSHSGSARTSENQVDLKTDVSQPSDINHELWIAAGACHQIPPLHQSSKDSCKNDLNISQTAYPLLHDSNPHGPQLQTFIAEEKLNLQRVTRQDGETGNGAEENIVYL
SIO_010081: ARHGEF28
subclass of: SO_0000673
so part of: ARHGEF28
location: complement(join(7709607..7709770,7749525..7749825,7751077..7751559,7756042..7756089,7756188..7756226,7759122..7759222,7762147..7762278,7766737..7766919,7768418..7768509,7769521..7769699,7773061..7773137,7774013..7774267,7777373..7777490,7778654..7778776,7784226..7784473,7788119..7788259,7789480..7789607,7789684..7789828,7799995..7800127,7800475..7800598,7805573..7805615,7810078..7810189,7814217..7814424,7817659..7817993,7822515..7822633,7866508..7866568,7867142..7867194,7881618..7881687,7887873..7888053,7891801..7891984,7913262..7913555,7916234..7916381,7986656..7986688))
location: region:7709607-7986688:-1
so has part: feature:7986656-7986688:-1:exon
so has part: feature:7916234-7916381:-1:exon
so has part: feature:7913262-7913555:-1:exon
so has part: feature:7891801-7891984:-1:exon
so has part: feature:7887873-7888053:-1:exon
so has part: feature:7881618-7881687:-1:exon
so has part: feature:7867142-7867194:-1:exon
so has part: feature:7866508-7866568:-1:exon
so has part: feature:7822515-7822633:-1:exon
so has part: feature:7817659-7817993:-1:exon
so has part: feature:7814217-7814424:-1:exon
so has part: feature:7810078-7810189:-1:exon
so has part: feature:7805573-7805615:-1:exon
so has part: feature:7800475-7800598:-1:exon
so has part: feature:7799995-7800127:-1:exon
so has part: feature:7789684-7789828:-1:exon
so has part: feature:7789480-7789607:-1:exon
so has part: feature:7788119-7788259:-1:exon
so has part: feature:7784226-7784473:-1:exon
so has part: feature:7778654-7778776:-1:exon
so has part: feature:7777373-7777490:-1:exon
so has part: feature:7774013-7774267:-1:exon
so has part: feature:7773061-7773137:-1:exon
so has part: feature:7769521-7769699:-1:exon
so has part: feature:7768418-7768509:-1:exon
so has part: feature:7766737-7766919:-1:exon
so has part: feature:7762147-7762278:-1:exon
so has part: feature:7759122-7759222:-1:exon
so has part: feature:7756188-7756226:-1:exon
so has part: feature:7756042-7756089:-1:exon
so has part: feature:7751077-7751559:-1:exon
so has part: feature:7749525-7749825:-1:exon
so has part: feature:7709607-7709770:-1:exon

XP_017921059.1
type: Protein
SIO_000068: ncbiprotein

position:7709607:-1
position: 7709607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7986688:-1
position: 7986688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7986656-7986688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7916234-7916381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7913262-7913555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7891801-7891984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7887873-7888053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7881618-7881687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7867142-7867194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7866508-7866568:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7822515-7822633:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7817659-7817993:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7814217-7814424:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7810078-7810189:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7805573-7805615:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7800475-7800598:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7799995-7800127:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7789684-7789828:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7789480-7789607:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7788119-7788259:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7784226-7784473:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7778654-7778776:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7777373-7777490:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7774013-7774267:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7773061-7773137:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7769521-7769699:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7768418-7768509:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7766737-7766919:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7762147-7762278:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7759122-7759222:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7756188-7756226:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7756042-7756089:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7751077-7751559:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7749525-7749825:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7709607-7709770:-1:exon

ARHGEF28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 28 isoform X1
translation: MELNCSEVPLYGQMTVCAKFGKNVYLPKDAEFYFIYNGSHQRHIVIAERTEDNVLQSSIPGHGLQETVTVSVCLCSEGYSPVTMGSDSVTYVDNMACRLARLLVTQADRLTASSHQTLLTPFALTAGALPALDEELVLALTHLELPLGWTVLGNSSLEVSLHRESLLHLAVRWGLTKLSQLLLCLPGGAQALTLPNEEGATPLDLALRGGHSKLVEDITNFQGRRSPGFFRVQLSEDASLRYIHSSETLTLTLNHTAEHLLEADIKLFRKYFWDRAFLIKALEDQEATSEKPDMPSSAAETEEEIKNSGCSGSSPRKEDVKRVKSPVVPLNEHEDPDRLDLDRSFDALKKSKHPPFLAAGQLSDMLNGGDEIYANCMVIDQVGDLDINYINIEGIPANTCLESMDSSLGPESSKAILPAEARAGTHPPSKDTEVTSHTEASAGTHPPSKSTEVTSHTEAQAPFVSSSSYASNLNLSFGPRGFEKEQSRLKKRSSSLDALDADSEGEGHSEQLHNCYTPVCQSSSRTGITSGDESDSFETNTESDFNISRTESFSLSSSLQLKESLFSGIRSRSYSCSSPKISLGKTRLIRDFTVCNSVEEQRAYSLPEPPRENRIQEEEWDKYIIPAKSESEKYKVSRTFSFFMNRMTSPRNKAKTKGKDAKDKEKLTRHQFVPGTFSGVLQCLVCDKTLLGKESFQCSNCNGNVHKVCKDAAPLCTKKFQEKYNKNKPQTVLGSSSFRDVPPPGLSLHPSSSMPIGLPTGRKEMAGQVHPLSRSVPGTSMESSRRPGASLESENDGSTWRSRSHSDEMLQPMGSSPSTDSFLTEDVVDSSLWSDLSGDAQEFEAESWSLVVDPSFCSQQEKDVIQRQDVIFELMQTEMHHIQTLFIMSEIFRKGMKEELQLDHSTVDKIFPCLDELLEIHKHFFYSMKERRQESCVGNDRNFIINRIGDILVQQFSEENANKMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKESTEEQRDLCKALCLIKDMIAAVDLKVSEYEKKQKWLEILNKIENKTYTKLKNGHVFRKQALMSKERTLLYDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVESCPEEEGGRTSESDEERRKAEARVAKIQQCQEMLSNQDQQICTYLEEKLHIYAKLGELSGYQDVHLEPHLLIQTDPGEPPQAASLLAAALKEAESLQVAVKASQMSDACQSPEEGCGEPALPDVLNSQDAPGLSTASLVTEGTGGRGCWDVDAGTQGVGTDLAVSDAGEKVEYRSFPGSLQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHRLVLQQRDSLAPGPAFRGSPFQDQKSRSLEKQQEELADTHKLQLQFQQDQHRWLRRCDQQQREQEARASRLQERERECRAQEELLLRSRGELDQQLQDYQQSLERLREGQRLVERERERMRAQQSLLHHWKHGRQSSLPAAFSPGTLEVMELNQSETLCHENSFFFNEALVQMSVNPLNKLTPPDIHQDAAHPPGVSHSGSARTSENQVDLKTDVSQPSDINHELWIAAGACHQIPPLHQSSKDSCKNDLNISQTAYPLLHDSNPHGPQLQTFIAEEKLNLQRVTRQDGETGNGAEENIVYL
SIO_010081: ARHGEF28
subclass of: SO_0000673
so part of: ARHGEF28
location: complement(join(7709607..7709770,7749525..7749825,7751077..7751559,7756042..7756089,7756188..7756226,7759122..7759222,7762147..7762278,7766737..7766919,7768418..7768509,7769521..7769699,7773061..7773137,7774013..7774267,7777373..7777490,7778654..7778776,7784226..7784473,7788119..7788259,7789480..7789607,7789684..7789828,7792186..7792234,7793287..7793342,7799995..7800127,7800475..7800598,7805573..7805615,7810078..7810189,7814217..7814424,7817659..7817993,7822515..7822633,7866508..7866568,7867142..7867194,7881618..7881687,7887873..7888053,7891801..7891984,7913262..7913555,7916234..7916381,7986656..7986688))
location: region:7709607-7986688:-1
so has part: feature:7986656-7986688:-1:exon
so has part: feature:7916234-7916381:-1:exon
so has part: feature:7913262-7913555:-1:exon
so has part: feature:7891801-7891984:-1:exon
so has part: feature:7887873-7888053:-1:exon
so has part: feature:7881618-7881687:-1:exon
so has part: feature:7867142-7867194:-1:exon
so has part: feature:7866508-7866568:-1:exon
so has part: feature:7822515-7822633:-1:exon
so has part: feature:7817659-7817993:-1:exon
so has part: feature:7814217-7814424:-1:exon
so has part: feature:7810078-7810189:-1:exon
so has part: feature:7805573-7805615:-1:exon
so has part: feature:7800475-7800598:-1:exon
so has part: feature:7799995-7800127:-1:exon
so has part: feature:7793287-7793342:-1:exon
so has part: feature:7792186-7792234:-1:exon
so has part: feature:7789684-7789828:-1:exon
so has part: feature:7789480-7789607:-1:exon
so has part: feature:7788119-7788259:-1:exon
so has part: feature:7784226-7784473:-1:exon
so has part: feature:7778654-7778776:-1:exon
so has part: feature:7777373-7777490:-1:exon
so has part: feature:7774013-7774267:-1:exon
so has part: feature:7773061-7773137:-1:exon
so has part: feature:7769521-7769699:-1:exon
so has part: feature:7768418-7768509:-1:exon
so has part: feature:7766737-7766919:-1:exon
so has part: feature:7762147-7762278:-1:exon
so has part: feature:7759122-7759222:-1:exon
so has part: feature:7756188-7756226:-1:exon
so has part: feature:7756042-7756089:-1:exon
so has part: feature:7751077-7751559:-1:exon
so has part: feature:7749525-7749825:-1:exon
so has part: feature:7709607-7709770:-1:exon

XP_017921057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7986656-7986688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7916234-7916381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7913262-7913555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7891801-7891984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7887873-7888053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7881618-7881687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7867142-7867194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7866508-7866568:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7822515-7822633:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7817659-7817993:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7814217-7814424:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7810078-7810189:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7805573-7805615:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7800475-7800598:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7799995-7800127:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7793287-7793342:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7792186-7792234:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7789684-7789828:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7789480-7789607:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7788119-7788259:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7784226-7784473:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7778654-7778776:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7777373-7777490:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7774013-7774267:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7773061-7773137:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7769521-7769699:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7768418-7768509:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7766737-7766919:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7762147-7762278:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7759122-7759222:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7756188-7756226:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7756042-7756089:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7751077-7751559:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7749525-7749825:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7709607-7709770:-1:exon

ARHGEF28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 28 isoform X2
translation: MTVCAKFGKNVYLPKDAEFYFIYNGSHQRHIVIAERTEDNVLQSSIPGHGLQETVTVSVCLCSEGYSPVTMGSDSVTYVDNMACRLARLLVTQADRLTASSHQTLLTPFALTAGALPALDEELVLALTHLELPLGWTVLGNSSLEVSLHRESLLHLAVRWGLTKLSQLLLCLPGGAQALTLPNEEGATPLDLALRGGHSKLVEDITNFQGRRSPGFFRVQLSEDASLRYIHSSETLTLTLNHTAEHLLEADIKLFRKYFWDRAFLIKALEDQEATSEKPDMPSSAAETEEEIKNSGCSGSSPRKEDVKRVKSPVVPLNEHEDPDRLDLDRSFDALKKSKHPPFLAAGQLSDMLNGGDEIYANCMVIDQVGDLDINYINIEGIPANTCLESMDSSLGPESSKAILPAEARAGTHPPSKDTEVTSHTEASAGTHPPSKSTEVTSHTEAQAPFVSSSSYASNLNLSFGPRGFEKEQSRLKKRSSSLDALDADSEGEGHSEQLHNCYTPVCQSSSRTGITSGDESDSFETNTESDFNISRTESFSLSSSLQLKESLFSGIRSRSYSCSSPKISLGKTRLIRDFTVCNSVEEQRAYSLPEPPRENRIQEEEWDKYIIPAKSESEKYKVSRTFSFFMNRMTSPRNKAKTKGKDAKDKEKLTRHQFVPGTFSGVLQCLVCDKTLLGKESFQCSNCNGNVHKVCKDAAPLCTKKFQEKYNKNKPQTVLGSSSFRDVPPPGLSLHPSSSMPIGLPTGRKEMAGQVHPLSRSVPGTSMESSRRPGASLESENDGSTWRSRSHSDEMLQPMGSSPSTDSFLTEDVVDSSLWSDLSGDAQEFEAESWSLVVDPSFCSQQEKDVIQRQDVIFELMQTEMHHIQTLFIMSEIFRKGMKEELQLDHSTVDKIFPCLDELLEIHKHFFYSMKERRQESCVGNDRNFIINRIGDILVQQFSEENANKMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKESTEEQRDLCKALCLIKDMIAAVDLKVSEYEKKQKWLEILNKIENKTYTKLKNGHVFRKQALMSKERTLLYDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVESCPEEEGGRTSESDEERRKAEARVAKIQQCQEMLSNQDQQICTYLEEKLHIYAKLGELSGYQDVHLEPHLLIQTDPGEPPQAASLLAAALKEAESLQVAVKASQMSDACQSPEEGCGEPALPDVLNSQDAPGLSTASLVTEGTGGRGCWDVDAGTQGVGTDLAVSDAGEKVEYRSFPGSLQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHRLVLQQRDSLAPGPAFRGSPFQDQKSRSLEKQQEELADTHKLQLQFQQDQHRWLRRCDQQQREQEARASRLQERERECRAQEELLLRSRGELDQQLQDYQQSLERLREGQRLVERERERMRAQQSLLHHWKHGRQSSLPAAFSPGTLEVMELNQSETLCHENSFFFNEALVQMSVNPLNKLTPPDIHQDAAHPPGVSHSGSARTSENQVDLKTDVSQPSDINHELWIAAGACHQIPPLHQSSKDSCKNDLNISQTAYPLLHDSNPHGPQLQTFIAEEKLNLQRVTRQDGETGNGAEENIVYL
SIO_010081: ARHGEF28
subclass of: SO_0000673
so part of: ARHGEF28
location: complement(join(7709607..7709770,7749525..7749825,7751077..7751559,7756042..7756089,7756188..7756226,7759122..7759222,7762147..7762278,7766737..7766919,7768418..7768509,7769521..7769699,7773061..7773137,7774013..7774267,7777373..7777490,7778654..7778776,7784226..7784473,7788119..7788259,7789480..7789607,7789684..7789828,7792186..7792234,7793287..7793342,7799995..7800127,7800475..7800598,7805573..7805615,7810078..7810189,7814217..7814424,7817659..7817993,7822515..7822633,7866508..7866568,7867142..7867194,7881618..7881687,7887873..7888053,7891801..7891984,7913262..7913555,7916234..7916375))
location: region:7709607-7916375:-1
so has part: feature:7916234-7916375:-1:exon
so has part: feature:7913262-7913555:-1:exon
so has part: feature:7891801-7891984:-1:exon
so has part: feature:7887873-7888053:-1:exon
so has part: feature:7881618-7881687:-1:exon
so has part: feature:7867142-7867194:-1:exon
so has part: feature:7866508-7866568:-1:exon
so has part: feature:7822515-7822633:-1:exon
so has part: feature:7817659-7817993:-1:exon
so has part: feature:7814217-7814424:-1:exon
so has part: feature:7810078-7810189:-1:exon
so has part: feature:7805573-7805615:-1:exon
so has part: feature:7800475-7800598:-1:exon
so has part: feature:7799995-7800127:-1:exon
so has part: feature:7793287-7793342:-1:exon
so has part: feature:7792186-7792234:-1:exon
so has part: feature:7789684-7789828:-1:exon
so has part: feature:7789480-7789607:-1:exon
so has part: feature:7788119-7788259:-1:exon
so has part: feature:7784226-7784473:-1:exon
so has part: feature:7778654-7778776:-1:exon
so has part: feature:7777373-7777490:-1:exon
so has part: feature:7774013-7774267:-1:exon
so has part: feature:7773061-7773137:-1:exon
so has part: feature:7769521-7769699:-1:exon
so has part: feature:7768418-7768509:-1:exon
so has part: feature:7766737-7766919:-1:exon
so has part: feature:7762147-7762278:-1:exon
so has part: feature:7759122-7759222:-1:exon
so has part: feature:7756188-7756226:-1:exon
so has part: feature:7756042-7756089:-1:exon
so has part: feature:7751077-7751559:-1:exon
so has part: feature:7749525-7749825:-1:exon
so has part: feature:7709607-7709770:-1:exon

XP_017921058.1
type: Protein
SIO_000068: ncbiprotein

position:7916375:-1
position: 7916375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7916234-7916375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7913262-7913555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7891801-7891984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7887873-7888053:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7881618-7881687:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7867142-7867194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7866508-7866568:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7822515-7822633:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7817659-7817993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7814217-7814424:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7810078-7810189:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7805573-7805615:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7800475-7800598:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7799995-7800127:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7793287-7793342:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7792186-7792234:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7789684-7789828:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7789480-7789607:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7788119-7788259:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7784226-7784473:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7778654-7778776:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7777373-7777490:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7774013-7774267:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7773061-7773137:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7769521-7769699:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7768418-7768509:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7766737-7766919:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7762147-7762278:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7759122-7759222:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7756188-7756226:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7756042-7756089:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7751077-7751559:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7749525-7749825:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7709607-7709770:-1:exon

ARHGEF28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 28 isoform X4
translation: MDSDSDSPFNYSWPSFPKMKIRRRASKQDRSFDALKKSKHPPFLAAGQLSDMLNGGDEIYANCMVIDQVGDLDINYINIEGIPANTCLESMDSSLGPESSKAILPAEARAGTHPPSKDTEVTSHTEASAGTHPPSKSTEVTSHTEAQAPFVSSSSYASNLNLSFGPRGFEKEQSRLKKRSSSLDALDADSEGEGHSEQLHNCYTPVCQSSSRTGITSGDESDSFETNTESDFNISRTESFSLSSSLQLKESLFSGIRSRSYSCSSPKISLGKTRLIRDFTVCNSVEEQRAYSLPEPPRENRIQEEEWDKYIIPAKSESEKYKVSRTFSFFMNRMTSPRNKAKTKGKDAKDKEKLTRHQFVPGTFSGVLQCLVCDKTLLGKESFQCSNCNGNVHKVCKDAAPLCTKKFQEKYNKNKPQTVLGSSSFRDVPPPGLSLHPSSSMPIGLPTGRKEMAGQVHPLSRSVPGTSMESSRRPGASLESENDGSTWRSRSHSDEMLQPMGSSPSTDSFLTEDVVDSSLWSDLSGDAQEFEAESWSLVVDPSFCSQQEKDVIQRQDVIFELMQTEMHHIQTLFIMSEIFRKGMKEELQLDHSTVDKIFPCLDELLEIHKHFFYSMKERRQESCVGNDRNFIINRIGDILVQQFSEENANKMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKESTEEQRDLCKALCLIKDMIAAVDLKVSEYEKKQKWLEILNKIENKTYTKLKNGHVFRKQALMSKERTLLYDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVESCPEEEGGRTSESDEERRKAEARVAKIQQCQEMLSNQDQQICTYLEEKLHIYAKLGELSGYQDVHLEPHLLIQTDPGEPPQAASLLAAALKEAESLQVAVKASQMSDACQSPEEGCGEPALPDVLNSQDAPGLSTASLVTEGTGGRGCWDVDAGTQGVGTDLAVSDAGEKVEYRSFPGSLQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHRLVLQQRDSLAPGPAFRGSPFQDQKSRSLEKQQEELADTHKLQLQFQQDQHRWLRRCDQQQREQEARASRLQERERECRAQEELLLRSRGELDQQLQDYQQSLERLREGQRLVERERERMRAQQSLLHHWKHGRQSSLPAAFSPGTLEVMELNQSETLCHENSFFFNEALVQMSVNPLNKLTPPDIHQDAAHPPGVSHSGSARTSENQVDLKTDVSQPSDINHELWIAAGACHQIPPLHQSSKDSCKNDLNISQTAYPLLHDSNPHGPQLQTFIAEEKLNLQRVTRQDGETGNGAEENIVYL
SIO_010081: ARHGEF28
subclass of: SO_0000673
so part of: ARHGEF28
location: complement(join(7709607..7709770,7749525..7749825,7751077..7751559,7756042..7756089,7756188..7756226,7759122..7759222,7762147..7762278,7766737..7766919,7768418..7768509,7769521..7769699,7773061..7773137,7774013..7774267,7777373..7777490,7778654..7778776,7784226..7784473,7788119..7788259,7789480..7789607,7789684..7789828,7792186..7792234,7793287..7793342,7799995..7800127,7800475..7800598,7805573..7805615,7810078..7810189,7814217..7814424,7817659..7817993,7822515..7822633,7843596..7843680))
location: region:7709607-7843680:-1
so has part: feature:7843596-7843680:-1:exon
so has part: feature:7822515-7822633:-1:exon
so has part: feature:7817659-7817993:-1:exon
so has part: feature:7814217-7814424:-1:exon
so has part: feature:7810078-7810189:-1:exon
so has part: feature:7805573-7805615:-1:exon
so has part: feature:7800475-7800598:-1:exon
so has part: feature:7799995-7800127:-1:exon
so has part: feature:7793287-7793342:-1:exon
so has part: feature:7792186-7792234:-1:exon
so has part: feature:7789684-7789828:-1:exon
so has part: feature:7789480-7789607:-1:exon
so has part: feature:7788119-7788259:-1:exon
so has part: feature:7784226-7784473:-1:exon
so has part: feature:7778654-7778776:-1:exon
so has part: feature:7777373-7777490:-1:exon
so has part: feature:7774013-7774267:-1:exon
so has part: feature:7773061-7773137:-1:exon
so has part: feature:7769521-7769699:-1:exon
so has part: feature:7768418-7768509:-1:exon
so has part: feature:7766737-7766919:-1:exon
so has part: feature:7762147-7762278:-1:exon
so has part: feature:7759122-7759222:-1:exon
so has part: feature:7756188-7756226:-1:exon
so has part: feature:7756042-7756089:-1:exon
so has part: feature:7751077-7751559:-1:exon
so has part: feature:7749525-7749825:-1:exon
so has part: feature:7709607-7709770:-1:exon

XP_017921060.1
type: Protein
SIO_000068: ncbiprotein

position:7843680:-1
position: 7843680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7843596-7843680:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7822515-7822633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7817659-7817993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7814217-7814424:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7810078-7810189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7805573-7805615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7800475-7800598:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7799995-7800127:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7793287-7793342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7792186-7792234:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7789684-7789828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7789480-7789607:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7788119-7788259:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7784226-7784473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7778654-7778776:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7777373-7777490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7774013-7774267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7773061-7773137:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7769521-7769699:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7768418-7768509:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7766737-7766919:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7762147-7762278:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7759122-7759222:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7756188-7756226:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7756042-7756089:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7751077-7751559:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7749525-7749825:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7709607-7709770:-1:exon

ARHGEF28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 28 isoform X5
translation: MLTVDRSFDALKKSKHPPFLAAGQLSDMLNGGDEIYANCMVIDQVGDLDINYINIEGIPANTCLESMDSSLGPESSKAILPAEARAGTHPPSKDTEVTSHTEASAGTHPPSKSTEVTSHTEAQAPFVSSSSYASNLNLSFGPRGFEKEQSRLKKRSSSLDALDADSEGEGHSEQLHNCYTPVCQSSSRTGITSGDESDSFETNTESDFNISRTESFSLSSSLQLKESLFSGIRSRSYSCSSPKISLGKTRLIRDFTVCNSVEEQRAYSLPEPPRENRIQEEEWDKYIIPAKSESEKYKVSRTFSFFMNRMTSPRNKAKTKGKDAKDKEKLTRHQFVPGTFSGVLQCLVCDKTLLGKESFQCSNCNGNVHKVCKDAAPLCTKKFQEKYNKNKPQTVLGSSSFRDVPPPGLSLHPSSSMPIGLPTGRKEMAGQVHPLSRSVPGTSMESSRRPGASLESENDGSTWRSRSHSDEMLQPMGSSPSTDSFLTEDVVDSSLWSDLSGDAQEFEAESWSLVVDPSFCSQQEKDVIQRQDVIFELMQTEMHHIQTLFIMSEIFRKGMKEELQLDHSTVDKIFPCLDELLEIHKHFFYSMKERRQESCVGNDRNFIINRIGDILVQQFSEENANKMKKIYGEFCSHHKEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKESTEEQRDLCKALCLIKDMIAAVDLKVSEYEKKQKWLEILNKIENKTYTKLKNGHVFRKQALMSKERTLLYDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVESCPEEEGGRTSESDEERRKAEARVAKIQQCQEMLSNQDQQICTYLEEKLHIYAKLGELSGYQDVHLEPHLLIQTDPGEPPQAASLLAAALKEAESLQVAVKASQMSDACQSPEEGCGEPALPDVLNSQDAPGLSTASLVTEGTGGRGCWDVDAGTQGVGTDLAVSDAGEKVEYRSFPGSLQSEIIQAIQNLTRLLYSLQAALTIQDSHIEIHRLVLQQRDSLAPGPAFRGSPFQDQKSRSLEKQQEELADTHKLQLQFQQDQHRWLRRCDQQQREQEARASRLQERERECRAQEELLLRSRGELDQQLQDYQQSLERLREGQRLVERERERMRAQQSLLHHWKHGRQSSLPAAFSPGTLEVMELNQSETLCHENSFFFNEALVQMSVNPLNKLTPPDIHQDAAHPPGVSHSGSARTSENQVDLKTDVSQPSDINHELWIAAGACHQIPPLHQSSKDSCKNDLNISQTAYPLLHDSNPHGPQLQTFIAEEKLNLQRVTRQDGETGNGAEENIVYL
SIO_010081: ARHGEF28
subclass of: SO_0000673
so part of: ARHGEF28
location: complement(join(7709607..7709770,7749525..7749825,7751077..7751559,7756042..7756089,7756188..7756226,7759122..7759222,7762147..7762278,7766737..7766919,7768418..7768509,7769521..7769699,7773061..7773137,7774013..7774267,7777373..7777490,7778654..7778776,7784226..7784473,7788119..7788259,7789480..7789607,7789684..7789828,7792186..7792234,7793287..7793342,7799995..7800127,7800475..7800598,7805573..7805615,7810078..7810189,7814217..7814424,7817659..7817993,7822515..7822633,7841896..7841908))
location: region:7709607-7841908:-1
so has part: feature:7841896-7841908:-1:exon
so has part: feature:7822515-7822633:-1:exon
so has part: feature:7817659-7817993:-1:exon
so has part: feature:7814217-7814424:-1:exon
so has part: feature:7810078-7810189:-1:exon
so has part: feature:7805573-7805615:-1:exon
so has part: feature:7800475-7800598:-1:exon
so has part: feature:7799995-7800127:-1:exon
so has part: feature:7793287-7793342:-1:exon
so has part: feature:7792186-7792234:-1:exon
so has part: feature:7789684-7789828:-1:exon
so has part: feature:7789480-7789607:-1:exon
so has part: feature:7788119-7788259:-1:exon
so has part: feature:7784226-7784473:-1:exon
so has part: feature:7778654-7778776:-1:exon
so has part: feature:7777373-7777490:-1:exon
so has part: feature:7774013-7774267:-1:exon
so has part: feature:7773061-7773137:-1:exon
so has part: feature:7769521-7769699:-1:exon
so has part: feature:7768418-7768509:-1:exon
so has part: feature:7766737-7766919:-1:exon
so has part: feature:7762147-7762278:-1:exon
so has part: feature:7759122-7759222:-1:exon
so has part: feature:7756188-7756226:-1:exon
so has part: feature:7756042-7756089:-1:exon
so has part: feature:7751077-7751559:-1:exon
so has part: feature:7749525-7749825:-1:exon
so has part: feature:7709607-7709770:-1:exon

XP_017921061.1
type: Protein
SIO_000068: ncbiprotein

position:7841908:-1
position: 7841908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7841896-7841908:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7822515-7822633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7817659-7817993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7814217-7814424:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7810078-7810189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7805573-7805615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7800475-7800598:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7799995-7800127:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7793287-7793342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7792186-7792234:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7789684-7789828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7789480-7789607:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7788119-7788259:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7784226-7784473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7778654-7778776:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7777373-7777490:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7774013-7774267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7773061-7773137:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7769521-7769699:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7768418-7768509:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7766737-7766919:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7762147-7762278:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7759122-7759222:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7756188-7756226:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7756042-7756089:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7751077-7751559:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7749525-7749825:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7709607-7709770:-1:exon

LOC102182259
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102182259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8004017..8006839
location: region:8004017-8006839:1
so has part: feature:8004017-8006839:1:exon

102182259
type: Gene
SIO_000068: ncbigene

position:8004017:1
position: 8004017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8006839:1
position: 8006839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8004017-8006839:1:exon

LOC102182259
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102182259
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102182259
subclass of: SO_0000673
so part of: LOC102182259
location: 8004017..8006839
location: region:8004017-8006839:1
so has part: feature:8004017-8006839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8004017-8006839:1:exon

LOC102182540
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102182540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8009069..8009442
location: region:8009069-8009442:1
so has part: feature:8009069-8009442:1:exon

102182540
type: Gene
SIO_000068: ncbigene

position:8009069:1
position: 8009069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8009442:1
position: 8009442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8009069-8009442:1:exon

LOC102182540
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102182540
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102182540
subclass of: SO_0000673
so part of: LOC102182540
location: 8009069..8009442
location: region:8009069-8009442:1
so has part: feature:8009069-8009442:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8009069-8009442:1:exon

UTP15
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: UTP15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8078101..8095736)
location: region:8078101-8095736:-1
so has part: feature:8078101-8095736:-1:exon
subclass of: SO_0000010

102172390
type: Gene
SIO_000068: ncbigene

position:8078101:-1
position: 8078101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8095736:-1
position: 8095736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8078101-8095736:-1:exon

UTP15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: UTP15
product: UTP15, small subunit processome component
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_005694556.3
SIO_010081: UTP15
subclass of: SO_0000673
so part of: UTP15
location: complement(join(8078101..8079128,8079585..8079643,8079811..8079944,8081385..8081486,8082210..8082359,8083738..8083822,8085492..8085627,8087421..8087546,8088006..8088184,8089294..8089478,8089567..8089659,8090628..8090791,8095522..8095736))
location: region:8078101-8095736:-1
so has part: feature:8095522-8095736:-1:exon
so has part: feature:8090628-8090791:-1:exon
so has part: feature:8089567-8089659:-1:exon
so has part: feature:8089294-8089478:-1:exon
so has part: feature:8088006-8088184:-1:exon
so has part: feature:8087421-8087546:-1:exon
so has part: feature:8085492-8085627:-1:exon
so has part: feature:8083738-8083822:-1:exon
so has part: feature:8082210-8082359:-1:exon
so has part: feature:8081385-8081486:-1:exon
so has part: feature:8079811-8079944:-1:exon
so has part: feature:8079585-8079643:-1:exon
so has part: feature:8078101-8079128:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8095522-8095736:-1:exon

position:8095522:-1
position: 8095522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8090628-8090791:-1:exon

position:8090628:-1
position: 8090628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8090791:-1
position: 8090791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8089567-8089659:-1:exon

position:8089567:-1
position: 8089567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8089659:-1
position: 8089659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8089294-8089478:-1:exon

position:8089294:-1
position: 8089294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8089478:-1
position: 8089478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8088006-8088184:-1:exon

position:8088006:-1
position: 8088006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8088184:-1
position: 8088184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8087421-8087546:-1:exon

position:8087421:-1
position: 8087421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8087546:-1
position: 8087546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8085492-8085627:-1:exon

position:8085492:-1
position: 8085492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8085627:-1
position: 8085627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8083738-8083822:-1:exon

position:8083738:-1
position: 8083738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8083822:-1
position: 8083822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8082210-8082359:-1:exon

position:8082210:-1
position: 8082210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8082359:-1
position: 8082359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8081385-8081486:-1:exon

position:8081385:-1
position: 8081385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8081486:-1
position: 8081486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8079811-8079944:-1:exon

position:8079811:-1
position: 8079811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8079944:-1
position: 8079944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8079585-8079643:-1:exon

position:8079585:-1
position: 8079585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8079643:-1
position: 8079643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8078101-8079128:-1:exon

position:8079128:-1
position: 8079128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UTP15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: UTP15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar RNA-associated protein 15 homolog
translation: MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSSQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHSVDFTADKYHVVSGADDYTVKLWDIPNSQEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNQSVISVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYTASILSLALAHEDETIVVGMTNGILSVKHRKSEAKKDLVPRRRRPAYRTFIKGKNYMKQQDDILINRPSKKHLELYDRDLKNFRISKALDRVLEPTCSIKTPEVTVSIIKELNRRGVLANALAGRDEKEISRVLNFLIRNLSQPRFAPVLINAAEIIIDIYLPVIGQSPVVDKKFLVLQGLVEKEIDYQRELLETLGMMDMLFATMTRKESTSVLQHNTSDEFLENNKIES
SIO_010081: UTP15
subclass of: SO_0000673
so part of: UTP15
location: complement(join(8078908..8079128,8079585..8079643,8079811..8079944,8081385..8081486,8082210..8082359,8083738..8083822,8085492..8085627,8087421..8087546,8088006..8088184,8089294..8089478,8089567..8089659,8090628..8090717))
location: region:8078908-8090717:-1
so has part: feature:8090628-8090717:-1:exon
so has part: feature:8089567-8089659:-1:exon
so has part: feature:8089294-8089478:-1:exon
so has part: feature:8088006-8088184:-1:exon
so has part: feature:8087421-8087546:-1:exon
so has part: feature:8085492-8085627:-1:exon
so has part: feature:8083738-8083822:-1:exon
so has part: feature:8082210-8082359:-1:exon
so has part: feature:8081385-8081486:-1:exon
so has part: feature:8079811-8079944:-1:exon
so has part: feature:8079585-8079643:-1:exon
so has part: feature:8078908-8079128:-1:exon

XP_005694613.2
type: Protein
SIO_000068: ncbiprotein

position:8078908:-1
position: 8078908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8090717:-1
position: 8090717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8090628-8090717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8089567-8089659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8089294-8089478:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8088006-8088184:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8087421-8087546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8085492-8085627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8083738-8083822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8082210-8082359:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8081385-8081486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8079811-8079944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8079585-8079643:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8078908-8079128:-1:exon

ANKRA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ANKRA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8095770..8106362
location: region:8095770-8106362:1
so has part: feature:8095770-8106362:1:exon
subclass of: SO_0000010

102172664
type: Gene
SIO_000068: ncbigene

position:8095770:1
position: 8095770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8106362:1
position: 8106362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8095770-8106362:1:exon

ANKRA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ANKRA2
product: ankyrin repeat family A member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 43 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_005694557.3
SIO_010081: ANKRA2
subclass of: SO_0000673
so part of: ANKRA2
location: join(8095770..8096279,8098315..8098706,8099334..8099492,8101545..8101610,8103641..8103738,8104228..8104353,8104610..8104676,8105190..8105270,8105843..8106362)
location: region:8095770-8106362:1
so has part: feature:8095770-8096279:1:exon
so has part: feature:8098315-8098706:1:exon
so has part: feature:8099334-8099492:1:exon
so has part: feature:8101545-8101610:1:exon
so has part: feature:8103641-8103738:1:exon
so has part: feature:8104228-8104353:1:exon
so has part: feature:8104610-8104676:1:exon
so has part: feature:8105190-8105270:1:exon
so has part: feature:8105843-8106362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8095770-8096279:1:exon