Capra hircus breed San Clemente chromosome 12, ASM170441v1, whole genome shotgun sequence.
type: Entry
definition: Capra hircus breed San Clemente chromosome 12, ASM170441v1, whole genome shotgun sequence.
sequence version: NC_030819.1
sequence date: 2016-09-08
sequence: sequence
division: CON
label: NC_030819.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA340281
dblink: SAMN03863711
keyword: WGS
keyword: RefSeq
source: Capra hircus (goat)
organism: Capra hircus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra.
reference: 1
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM004573.1.\nAssembly name: ASM170441v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the USDA ARS on 2016/08/24. The\noriginal whole-genome shotgun project has the accession\nLWLT00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: USDA ARS\nAssembly Date :: MAR-2016\nAssembly Method :: Celera Assembler v. 8.2; BioNano Genomics\n Irys v. APRIL-2015; Lachesis Hi-C v.\n JUNE-2015\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Capra hircus Annotation Release 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 87277232
topology: linear
so has quality: SO_0000987
location: 1..87277232
location: region:1-87277232:1
RO_0002162: 9925

NC_030819
type: RefSeq
SIO_000068: refseq

PRJNA340281
type: BioProject
SIO_000068: bioproject

SAMN03863711
type: BioSample
SIO_000068: biosample

1
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87277232:1
position: 87277232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-87277232:1:source
so part of: sequence
organism: Capra hircus
mol type: genomic DNA
chromosome: 12
sex: male
tissue type: blood
dev stage: adult
breed: San Clemente

9925
type: Taxonomy
SIO_000068: taxonomy

LOC102177789
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102177789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<13143..247711)
location: region:13143-247711:-1
so has part: feature:13143-247711:-1:exon
subclass of: SO_0000010

102177789
type: Gene
SIO_000068: ncbigene

position:13143:-1
position: 13143
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:247711:-1
position: 247711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13143-247711:-1:exon

LOC102177789
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102177789
product: multidrug resistance-associated protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 1% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018056287.1
SIO_010081: LOC102177789
subclass of: SO_0000673
so part of: LOC102177789
location: complement(join(<13143..13277,21090..21195,21782..21954,33218..33307,40260..40415,49791..49982,51036..51136,52090..52200,53486..53605,60497..60647,76203..76282,124840..124986,126833..126927,127319..127356,128154..128294,129510..129719,148523..148619,161226..161312,161502..161596,190890..191081,195309..195398,202750..202851,235668..235917,236969..237094,238956..239119,247029..247152,247620..247711))
location: region:13143-247711:-1
so has part: feature:247620-247711:-1:exon
so has part: feature:247029-247152:-1:exon
so has part: feature:238956-239119:-1:exon
so has part: feature:236969-237094:-1:exon
so has part: feature:235668-235917:-1:exon
so has part: feature:202750-202851:-1:exon
so has part: feature:195309-195398:-1:exon
so has part: feature:190890-191081:-1:exon
so has part: feature:161502-161596:-1:exon
so has part: feature:161226-161312:-1:exon
so has part: feature:148523-148619:-1:exon
so has part: feature:129510-129719:-1:exon
so has part: feature:128154-128294:-1:exon
so has part: feature:127319-127356:-1:exon
so has part: feature:126833-126927:-1:exon
so has part: feature:124840-124986:-1:exon
so has part: feature:76203-76282:-1:exon
so has part: feature:60497-60647:-1:exon
so has part: feature:53486-53605:-1:exon
so has part: feature:52090-52200:-1:exon
so has part: feature:51036-51136:-1:exon
so has part: feature:49791-49982:-1:exon
so has part: feature:40260-40415:-1:exon
so has part: feature:33218-33307:-1:exon
so has part: feature:21782-21954:-1:exon
so has part: feature:21090-21195:-1:exon
so has part: feature:13143-13277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247620-247711:-1:exon

position:247620:-1
position: 247620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247029-247152:-1:exon

position:247029:-1
position: 247029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247152:-1
position: 247152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:238956-239119:-1:exon

position:238956:-1
position: 238956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239119:-1
position: 239119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236969-237094:-1:exon

position:236969:-1
position: 236969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237094:-1
position: 237094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:235668-235917:-1:exon

position:235668:-1
position: 235668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235917:-1
position: 235917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:202750-202851:-1:exon

position:202750:-1
position: 202750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202851:-1
position: 202851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:195309-195398:-1:exon

position:195309:-1
position: 195309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195398:-1
position: 195398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:190890-191081:-1:exon

position:190890:-1
position: 190890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191081:-1
position: 191081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:161502-161596:-1:exon

position:161502:-1
position: 161502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161596:-1
position: 161596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:161226-161312:-1:exon

position:161226:-1
position: 161226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161312:-1
position: 161312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:148523-148619:-1:exon

position:148523:-1
position: 148523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148619:-1
position: 148619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:129510-129719:-1:exon

position:129510:-1
position: 129510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129719:-1
position: 129719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:128154-128294:-1:exon

position:128154:-1
position: 128154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128294:-1
position: 128294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:127319-127356:-1:exon

position:127319:-1
position: 127319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127356:-1
position: 127356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:126833-126927:-1:exon

position:126833:-1
position: 126833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126927:-1
position: 126927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:124840-124986:-1:exon

position:124840:-1
position: 124840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124986:-1
position: 124986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:76203-76282:-1:exon

position:76203:-1
position: 76203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76282:-1
position: 76282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:60497-60647:-1:exon

position:60497:-1
position: 60497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60647:-1
position: 60647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:53486-53605:-1:exon

position:53486:-1
position: 53486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53605:-1
position: 53605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:52090-52200:-1:exon

position:52090:-1
position: 52090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52200:-1
position: 52200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:51036-51136:-1:exon

position:51036:-1
position: 51036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51136:-1
position: 51136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:49791-49982:-1:exon

position:49791:-1
position: 49791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49982:-1
position: 49982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:40260-40415:-1:exon

position:40260:-1
position: 40260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40415:-1
position: 40415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:33218-33307:-1:exon

position:33218:-1
position: 33218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33307:-1
position: 33307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:21782-21954:-1:exon

position:21782:-1
position: 21782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21954:-1
position: 21954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:21090-21195:-1:exon

position:21090:-1
position: 21090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21195:-1
position: 21195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:13143-13277:-1:exon

position:13277:-1
position: 13277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102177789
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102177789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multidrug resistance-associated protein 4-like
translation: MASWSLITGVVRPGWGRVIAIIKLYKGKRRRNPILCLPLFIQSLRLNNSAIRKTTTGQIVNLLSNDVNRFDRVTALLHILWIGPLMAITVIILIWMEIGISSLAGMALLIIFMLLQIFSGKLFLSLRSKIAAFTDTRLRAMNEVITGIRTIKMYAWEKSFAELITRLRRKEISKILRSSYLDGMNLIFFDISSKVILFVTFTTYVLLGNMITVSQVFLAITLYQAVKFTGILLFPMAIESVAETIASIQRIKNFLLLDELPQCNHQLPSDGKTIVNMQDFTAFWDKELRTPTLQGLSFTVRPGELLAVVGPVGAGKSSLLGAVLGELPPSQGKVSVHGRIAYVSQQPWVLSGTVRSNILFGKKYEKKRYMKVIKACALEKDLQFLENGDLTVVGDRGTTLSGGQKVRVNLARAVYQDADIYLLDDLLSAVDAEVSRHLFEQCICQVLHEKITILVTHQWQYLKDASQILLLEKGEMVQKGTYAELLKSGVDSASFLKKEIEEAEPSPVPESPTMRTQTSSKSSVQSQQSSTPLLKDAAAEDQDTENIQDTLSEERHLEGKVGFKTYKNYFRAGAHWSAIIFLILVNIAAEVAYILQDWWLLNWANEQHTLNIMAYEKGNITEMLDLNWYLGIFSGLTVSTLLFGVTRCLLALYILVNSSQTLHNKMLKSILRAPVSFFDRNPEGRILNCFSKDIGHMDDLLPSSFQEYVQTFLQLIGVLGVVVVVIPWIAIPVIPLVVIFFFLRRYFLETSRDVKRLECSTQSPVFSHLASSLQGLWTIRAYKAEQRFQKLFDSHQDLHSEAWFLLLTINRWFFLRLDIIYFIFISLVDFGSLLLAQTLNVGQVGLILSYALNIMVVFPWCIRLSVEVETMMISVERVIEYTELEQEAPWELEFRPPPDWPNNGMIALSNVNFKYSSDGPLVLKDLTTDIKPGEKVGIVGRTGAGKSSFIAALFRLSEPEGRVWIDKILTTEIGLHDLRKKMSIIPQDPIVFTGTMRKNLDPFNKHTDEELWNVLEEVRLKEIIEELPDKMNTELVESGSNLSVGQKQLVCLARAILRKNQILIIDEATAHVDPRTDELIRKKIREKFAQCTVLTITQRLSTIIDSDRIMVFDSGRLGEYDEPYVLLQNRDSLFYKMVQQLGKAKAAALTETAKQ
SIO_010081: LOC102177789
subclass of: SO_0000673
so part of: LOC102177789
location: complement(join(<13143..13277,21090..21195,21782..21954,33218..33307,40260..40415,49791..49982,51036..51136,52090..52200,53486..53605,60497..60647,76203..76282,124840..124986,126833..126927,127319..127356,128154..128294,129510..129719,148523..148619,161226..161312,161502..161596,190890..191081,195309..195398,202750..202851,235668..235917,236969..237094,238956..239119,247029..247152,247620..247711))
location: region:13143-247711:-1
so has part: feature:247620-247711:-1:exon
so has part: feature:247029-247152:-1:exon
so has part: feature:238956-239119:-1:exon
so has part: feature:236969-237094:-1:exon
so has part: feature:235668-235917:-1:exon
so has part: feature:202750-202851:-1:exon
so has part: feature:195309-195398:-1:exon
so has part: feature:190890-191081:-1:exon
so has part: feature:161502-161596:-1:exon
so has part: feature:161226-161312:-1:exon
so has part: feature:148523-148619:-1:exon
so has part: feature:129510-129719:-1:exon
so has part: feature:128154-128294:-1:exon
so has part: feature:127319-127356:-1:exon
so has part: feature:126833-126927:-1:exon
so has part: feature:124840-124986:-1:exon
so has part: feature:76203-76282:-1:exon
so has part: feature:60497-60647:-1:exon
so has part: feature:53486-53605:-1:exon
so has part: feature:52090-52200:-1:exon
so has part: feature:51036-51136:-1:exon
so has part: feature:49791-49982:-1:exon
so has part: feature:40260-40415:-1:exon
so has part: feature:33218-33307:-1:exon
so has part: feature:21782-21954:-1:exon
so has part: feature:21090-21195:-1:exon
so has part: feature:13143-13277:-1:exon

XP_017911776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247620-247711:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247029-247152:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238956-239119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236969-237094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235668-235917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202750-202851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195309-195398:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190890-191081:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:161502-161596:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161226-161312:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148523-148619:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:129510-129719:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:128154-128294:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:127319-127356:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:126833-126927:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:124840-124986:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:76203-76282:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:60497-60647:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:53486-53605:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:52090-52200:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:51036-51136:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:49791-49982:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:40260-40415:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:33218-33307:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:21782-21954:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:21090-21195:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:13143-13277:-1:exon

LOC106503859
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106503859
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 204318..208037
location: region:204318-208037:1
so has part: feature:204318-208037:1:exon

106503859
type: Gene
SIO_000068: ncbigene

position:204318:1
position: 204318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208037:1
position: 208037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204318-208037:1:exon

LOC106503859
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC106503859
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC106503859
subclass of: SO_0000673
so part of: LOC106503859
location: 204318..204379
location: region:204318-204379:1
so has part: feature:204318-204379:1:exon

position:204379:1
position: 204379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204318-204379:1:exon

LOC106503859
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC106503859
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC106503859
subclass of: SO_0000673
so part of: LOC106503859
location: 205138..206124
location: region:205138-206124:1
so has part: feature:205138-206124:1:exon

position:205138:1
position: 205138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206124:1
position: 206124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205138-206124:1:exon

LOC106503859
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC106503859
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC106503859
subclass of: SO_0000673
so part of: LOC106503859
location: 207456..208037
location: region:207456-208037:1
so has part: feature:207456-208037:1:exon

position:207456:1
position: 207456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207456-208037:1:exon

SOX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(296454..297759)
location: region:296454-297759:-1
so has part: feature:296454-297759:-1:exon
subclass of: SO_0000010

108637267
type: Gene
SIO_000068: ncbigene

position:296454:-1
position: 296454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297759:-1
position: 297759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296454-297759:-1:exon

SOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SOX1
product: SRY-box 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018056320.1
SIO_010081: SOX1
subclass of: SO_0000673
so part of: SOX1
location: complement(296454..297759)
location: region:296454-297759:-1
so has part: feature:296454-297759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296454-297759:-1:exon

SOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-1
translation: MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGSKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDKYSLAGGLLAAGAGGGAAVAVGVGAAAVGQRLESPGGAAGGGYAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHAHHPHAHPHNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAGGAHQNSAVAAAAAAAAASSGALGALGSLVKSEPSGSPPAAAHSRAPCPGDLREMISMYLPAGEGGDPAAAQSRLHSLPPHYQGAGAGANGTVPLTHI
SIO_010081: SOX1
subclass of: SO_0000673
so part of: SOX1
location: complement(296454..297572)
location: region:296454-297572:-1
so has part: feature:296454-297572:-1:exon

XP_017911809.1
type: Protein
SIO_000068: ncbiprotein

position:297572:-1
position: 297572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296454-297572:-1:exon

LOC108637285
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108637285
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 757904..759613
location: region:757904-759613:1
so has part: feature:757904-759613:1:exon
subclass of: SO_0000011

108637285
type: Gene
SIO_000068: ncbigene

position:757904:1
position: 757904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759613:1
position: 759613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757904-759613:1:exon

LOC108637285
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108637285
product: uncharacterized LOC108637285
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_001918922.1
SIO_010081: LOC108637285
subclass of: SO_0000673
so part of: LOC108637285
location: join(757904..758060,759260..759613)
location: region:757904-759613:1
so has part: feature:757904-758060:1:exon
so has part: feature:759260-759613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:757904-758060:1:exon

position:758060:1
position: 758060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:759260-759613:1:exon

position:759260:1
position: 759260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TEX29
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TEX29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(761462..771430)
location: region:761462-771430:-1
so has part: feature:761462-771430:-1:exon
subclass of: SO_0000010

102173311
type: Gene
SIO_000068: ncbigene

position:761462:-1
position: 761462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771430:-1
position: 771430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761462-771430:-1:exon

TEX29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TEX29
product: testis expressed 29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018056337.1
SIO_010081: TEX29
subclass of: SO_0000673
so part of: TEX29
location: complement(join(761462..761638,762338..762501,763254..763323,769739..769849,771169..771263,771344..771430))
location: region:761462-771430:-1
so has part: feature:771344-771430:-1:exon
so has part: feature:771169-771263:-1:exon
so has part: feature:769739-769849:-1:exon
so has part: feature:763254-763323:-1:exon
so has part: feature:762338-762501:-1:exon
so has part: feature:761462-761638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:771344-771430:-1:exon

position:771344:-1
position: 771344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:771169-771263:-1:exon

position:771169:-1
position: 771169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771263:-1
position: 771263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:769739-769849:-1:exon

position:769739:-1
position: 769739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769849:-1
position: 769849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:763254-763323:-1:exon

position:763254:-1
position: 763254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763323:-1
position: 763323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:762338-762501:-1:exon

position:762338:-1
position: 762338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762501:-1
position: 762501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:761462-761638:-1:exon

position:761638:-1
position: 761638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TEX29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TEX29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed sequence 29 protein
translation: MRYAPELKKSPSHLLKKFAVCDIPLYDICDYNVSRDRCKELGCCFYKGICYEKAVPTYVQVFSALIVIIAGAFVITIIYRVIQESRREKEVPTEAPVSAKSSVQVETQPPSNVGAGSQAPSMEMPQSQEGGTEDASLVITEEEETED
SIO_010081: TEX29
subclass of: SO_0000673
so part of: TEX29
location: complement(join(761598..761638,762338..762501,763254..763323,769739..769849,771169..771226))
location: region:761598-771226:-1
so has part: feature:771169-771226:-1:exon
so has part: feature:769739-769849:-1:exon
so has part: feature:763254-763323:-1:exon
so has part: feature:762338-762501:-1:exon
so has part: feature:761598-761638:-1:exon

XP_017911826.1
type: Protein
SIO_000068: ncbiprotein

position:761598:-1
position: 761598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771226:-1
position: 771226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771169-771226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:769739-769849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763254-763323:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:762338-762501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761598-761638:-1:exon

ARHGEF7
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(776822..878314)
location: region:776822-878314:-1
so has part: feature:776822-878314:-1:exon
subclass of: SO_0000010

102173015
type: Gene
SIO_000068: ncbigene

position:776822:-1
position: 776822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878314:-1
position: 878314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776822-878314:-1:exon

ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 66 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_018056342.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(776822..779111,779957..780011,780197..780296,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829039,833206..833336,835980..836064,849045..849131,877837..878314))
location: region:776822-878314:-1
so has part: feature:877837-878314:-1:exon
so has part: feature:849045-849131:-1:exon
so has part: feature:835980-836064:-1:exon
so has part: feature:833206-833336:-1:exon
so has part: feature:828838-829039:-1:exon
so has part: feature:822402-822490:-1:exon
so has part: feature:812703-812797:-1:exon
so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:780197-780296:-1:exon
so has part: feature:779957-780011:-1:exon
so has part: feature:776822-779111:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:877837-878314:-1:exon

position:877837:-1
position: 877837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:849045-849131:-1:exon

position:849045:-1
position: 849045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849131:-1
position: 849131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:835980-836064:-1:exon

position:835980:-1
position: 835980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836064:-1
position: 836064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:833206-833336:-1:exon

position:833206:-1
position: 833206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833336:-1
position: 833336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:828838-829039:-1:exon

position:828838:-1
position: 828838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829039:-1
position: 829039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:822402-822490:-1:exon

position:822402:-1
position: 822402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822490:-1
position: 822490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:812703-812797:-1:exon

position:812703:-1
position: 812703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812797:-1
position: 812797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:812368-812463:-1:exon

position:812368:-1
position: 812368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812463:-1
position: 812463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:804706-804828:-1:exon

position:804706:-1
position: 804706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804828:-1
position: 804828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:800523-800661:-1:exon

position:800523:-1
position: 800523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800661:-1
position: 800661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:799803-799862:-1:exon

position:799803:-1
position: 799803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799862:-1
position: 799862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:798991-799137:-1:exon

position:798991:-1
position: 798991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799137:-1
position: 799137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:798178-798264:-1:exon

position:798178:-1
position: 798178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798264:-1
position: 798264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:795676-795754:-1:exon

position:795676:-1
position: 795676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795754:-1
position: 795754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:795368-795507:-1:exon

position:795368:-1
position: 795368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795507:-1
position: 795507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:793564-793788:-1:exon

position:793564:-1
position: 793564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793788:-1
position: 793788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:791808-791901:-1:exon

position:791808:-1
position: 791808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791901:-1
position: 791901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:790336-790425:-1:exon

position:790336:-1
position: 790336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790425:-1
position: 790425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:780197-780296:-1:exon

position:780197:-1
position: 780197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780296:-1
position: 780296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:779957-780011:-1:exon

position:779957:-1
position: 779957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780011:-1
position: 780011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:776822-779111:-1:exon

position:779111:-1
position: 779111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 65 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018056338.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(776822..779111,779957..780011,780197..780296,787625..787801,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829039,833206..833336,835980..836064,849045..849131,877837..878314))
location: region:776822-878314:-1
so has part: feature:877837-878314:-1:exon
so has part: feature:849045-849131:-1:exon
so has part: feature:835980-836064:-1:exon
so has part: feature:833206-833336:-1:exon
so has part: feature:828838-829039:-1:exon
so has part: feature:822402-822490:-1:exon
so has part: feature:812703-812797:-1:exon
so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:787625-787801:-1:exon
so has part: feature:780197-780296:-1:exon
so has part: feature:779957-780011:-1:exon
so has part: feature:776822-779111:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:877837-878314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:849045-849131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835980-836064:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833206-833336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:828838-829039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822402-822490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812703-812797:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812368-812463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:804706-804828:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:800523-800661:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:799803-799862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:798991-799137:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:798178-798264:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:795676-795754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:795368-795507:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:793564-793788:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:791808-791901:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:790336-790425:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:787625-787801:-1:exon

position:787625:-1
position: 787625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787801:-1
position: 787801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:780197-780296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:779957-780011:-1:exon

urn:…
SIO_000300: 22
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ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 65 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_018056348.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(776822..779111,779957..780011,780197..780296,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829039,833206..833336,835980..836064,849045..849131,849312..849401))
location: region:776822-849401:-1
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position:849401:-1
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ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 64 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018056349.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
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location: region:776822-849331:-1
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position:849331:-1
position: 849331
reference: sequence
type: ReverseStrandPosition
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ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 64 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018056346.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(776822..779111,779957..780011,780197..780296,787625..787801,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829039,833206..833336,835980..836064,845904..845963))
location: region:776822-845963:-1
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ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 64 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018056344.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(776822..779111,779957..780011,780197..780296,787625..787801,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829039,833206..833336,835980..836064,837776..837847))
location: region:776822-837847:-1
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ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 65 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_018056345.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(776822..779111,779957..780011,780197..780296,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829039,833206..833336,835980..836064,837776..837846))
location: region:776822-837846:-1
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urn:…
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ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 64 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018056347.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(776822..779111,779957..780011,780197..780296,787625..787801,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,826982..828711))
location: region:776822-828711:-1
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so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:787625-787801:-1:exon
so has part: feature:780197-780296:-1:exon
so has part: feature:779957-780011:-1:exon
so has part: feature:776822-779111:-1:exon

position:828711:-1
position: 828711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826982-828711:-1:exon

position:826982:-1
position: 826982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:822402-822490:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:812703-812797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812368-812463:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:804706-804828:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:800523-800661:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:799803-799862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:798991-799137:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:798178-798264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795676-795754:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:795368-795507:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:793564-793788:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:791808-791901:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790336-790425:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:787625-787801:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:780197-780296:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:779957-780011:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776822-779111:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X3
translation: MNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSEGECLSNIREFLRGCGASLRLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGPQPAHGRTSQLFQGQYRSLDMTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSHLMGNLEEICSFQQMLVQSLEECTKMPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTEHSEELGEFMELKGASSPGILVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGSVVYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTVTKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDRLQKQTKAASAGNPSSKPHSVPSHTLPSHSITPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARRDLEKLVRKVLKNMNDPAWDETNL
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(778989..779111,779957..780011,780197..780296,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829039,833206..833336,835980..836064,849045..849131,877837..878001))
location: region:778989-878001:-1
so has part: feature:877837-878001:-1:exon
so has part: feature:849045-849131:-1:exon
so has part: feature:835980-836064:-1:exon
so has part: feature:833206-833336:-1:exon
so has part: feature:828838-829039:-1:exon
so has part: feature:822402-822490:-1:exon
so has part: feature:812703-812797:-1:exon
so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:780197-780296:-1:exon
so has part: feature:779957-780011:-1:exon
so has part: feature:778989-779111:-1:exon

XP_017911831.1
type: Protein
SIO_000068: ncbiprotein

position:778989:-1
position: 778989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878001:-1
position: 878001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877837-878001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:849045-849131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835980-836064:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833206-833336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:828838-829039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822402-822490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812703-812797:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812368-812463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:804706-804828:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:800523-800661:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:799803-799862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:798991-799137:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:798178-798264:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:795676-795754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:795368-795507:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:793564-793788:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:791808-791901:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:790336-790425:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:780197-780296:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:779957-780011:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:778989-779111:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X1
translation: MNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSEGECLSNIREFLRGCGASLRLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGPQPAHGRTSQLFQGQYRSLDMTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSHLMGNLEEICSFQQMLVQSLEECTKMPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTEHSEELGEFMELKGASSPGILVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGSVVYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTVTKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDRLQKQTKAASAGNPSSKPHSVPSHTLPSHSITPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRVEPSDFSEDSDYDSIWTAHSYRMGSTSRSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARRDLEKLVRKVLKNMNDPAWDETNL
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(778989..779111,779957..780011,780197..780296,787625..787801,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829039,833206..833336,835980..836064,849045..849131,877837..878001))
location: region:778989-878001:-1
so has part: feature:877837-878001:-1:exon
so has part: feature:849045-849131:-1:exon
so has part: feature:835980-836064:-1:exon
so has part: feature:833206-833336:-1:exon
so has part: feature:828838-829039:-1:exon
so has part: feature:822402-822490:-1:exon
so has part: feature:812703-812797:-1:exon
so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:787625-787801:-1:exon
so has part: feature:780197-780296:-1:exon
so has part: feature:779957-780011:-1:exon
so has part: feature:778989-779111:-1:exon

XP_017911827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:877837-878001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:849045-849131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835980-836064:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833206-833336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:828838-829039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822402-822490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812703-812797:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812368-812463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:804706-804828:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:800523-800661:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:799803-799862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:798991-799137:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:798178-798264:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:795676-795754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:795368-795507:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:793564-793788:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:791808-791901:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:790336-790425:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:787625-787801:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:780197-780296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:779957-780011:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:778989-779111:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X6
translation: MKTFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGPQPAHGRTSQLFQGQYRSLDMTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSHLMGNLEEICSFQQMLVQSLEECTKMPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTEHSEELGEFMELKGASSPGILVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGSVVYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTVTKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDRLQKQTKAASAGNPSSKPHSVPSHTLPSHSITPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARRDLEKLVRKVLKNMNDPAWDETNL
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(778989..779111,779957..780011,780197..780296,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829039,833206..833336,835980..836064,837776..837781))
location: region:778989-837781:-1
so has part: feature:837776-837781:-1:exon
so has part: feature:835980-836064:-1:exon
so has part: feature:833206-833336:-1:exon
so has part: feature:828838-829039:-1:exon
so has part: feature:822402-822490:-1:exon
so has part: feature:812703-812797:-1:exon
so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:780197-780296:-1:exon
so has part: feature:779957-780011:-1:exon
so has part: feature:778989-779111:-1:exon

XP_017911834.1
type: Protein
SIO_000068: ncbiprotein

position:837781:-1
position: 837781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837776-837781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835980-836064:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833206-833336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828838-829039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822402-822490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:812703-812797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812368-812463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:804706-804828:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:800523-800661:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:799803-799862:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:798991-799137:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:798178-798264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:795676-795754:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:795368-795507:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:793564-793788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:791808-791901:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:790336-790425:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:780197-780296:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:779957-780011:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:778989-779111:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X5
translation: MKTFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGPQPAHGRTSQLFQGQYRSLDMTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSHLMGNLEEICSFQQMLVQSLEECTKMPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTEHSEELGEFMELKGASSPGILVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGSVVYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTVTKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDRLQKQTKAASAGNPSSKPHSVPSHTLPSHSITPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRVEPSDFSEDSDYDSIWTAHSYRMGSTSRSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARRDLEKLVRKVLKNMNDPAWDETNL
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(778989..779111,779957..780011,780197..780296,787625..787801,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829039,833206..833336,835980..836064,837776..837781))
location: region:778989-837781:-1
so has part: feature:837776-837781:-1:exon
so has part: feature:835980-836064:-1:exon
so has part: feature:833206-833336:-1:exon
so has part: feature:828838-829039:-1:exon
so has part: feature:822402-822490:-1:exon
so has part: feature:812703-812797:-1:exon
so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:787625-787801:-1:exon
so has part: feature:780197-780296:-1:exon
so has part: feature:779957-780011:-1:exon
so has part: feature:778989-779111:-1:exon

XP_017911833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:837776-837781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835980-836064:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833206-833336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828838-829039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822402-822490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:812703-812797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812368-812463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:804706-804828:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:800523-800661:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:799803-799862:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:798991-799137:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:798178-798264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:795676-795754:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:795368-795507:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:793564-793788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:791808-791901:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:790336-790425:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:787625-787801:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:780197-780296:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:779957-780011:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:778989-779111:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X9
translation: MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSHLMGNLEEICSFQQMLVQSLEECTKMPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTEHSEELGEFMELKGASSPGILVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGSVVYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTVTKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDRLQKQTKAASAGNPSSKPHSVPSHTLPSHSITPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARRDLEKLVRKVLKNMNDPAWDETNL
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(778989..779111,779957..780011,780197..780296,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829036))
location: region:778989-829036:-1
so has part: feature:828838-829036:-1:exon
so has part: feature:822402-822490:-1:exon
so has part: feature:812703-812797:-1:exon
so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:780197-780296:-1:exon
so has part: feature:779957-780011:-1:exon
so has part: feature:778989-779111:-1:exon

XP_017911837.1
type: Protein
SIO_000068: ncbiprotein

position:829036:-1
position: 829036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828838-829036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:822402-822490:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:812703-812797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812368-812463:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:804706-804828:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:800523-800661:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:799803-799862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:798991-799137:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:798178-798264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795676-795754:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:795368-795507:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:793564-793788:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:791808-791901:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790336-790425:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:780197-780296:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:779957-780011:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:778989-779111:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X7
translation: MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSHLMGNLEEICSFQQMLVQSLEECTKMPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTEHSEELGEFMELKGASSPGILVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGSVVYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTVTKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDRLQKQTKAASAGNPSSKPHSVPSHTLPSHSITPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRVEPSDFSEDSDYDSIWTAHSYRMGSTSRSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARRDLEKLVRKVLKNMNDPAWDETNL
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(778989..779111,779957..780011,780197..780296,787625..787801,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829036))
location: region:778989-829036:-1
so has part: feature:828838-829036:-1:exon
so has part: feature:822402-822490:-1:exon
so has part: feature:812703-812797:-1:exon
so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:787625-787801:-1:exon
so has part: feature:780197-780296:-1:exon
so has part: feature:779957-780011:-1:exon
so has part: feature:778989-779111:-1:exon

XP_017911835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:828838-829036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:822402-822490:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:812703-812797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812368-812463:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:804706-804828:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:800523-800661:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:799803-799862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:798991-799137:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:798178-798264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795676-795754:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:795368-795507:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:793564-793788:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:791808-791901:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790336-790425:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:787625-787801:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:780197-780296:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:779957-780011:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:778989-779111:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X7
translation: MTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSHLMGNLEEICSFQQMLVQSLEECTKMPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTEHSEELGEFMELKGASSPGILVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGSVVYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTVTKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDRLQKQTKAASAGNPSSKPHSVPSHTLPSHSITPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRVEPSDFSEDSDYDSIWTAHSYRMGSTSRSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARRDLEKLVRKVLKNMNDPAWDETNL
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(778989..779111,779957..780011,780197..780296,787625..787801,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829036))
location: region:778989-829036:-1
so has part: feature:828838-829036:-1:exon
so has part: feature:822402-822490:-1:exon
so has part: feature:812703-812797:-1:exon
so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:787625-787801:-1:exon
so has part: feature:780197-780296:-1:exon
so has part: feature:779957-780011:-1:exon
so has part: feature:778989-779111:-1:exon

XP_017911838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:828838-829036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:822402-822490:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:812703-812797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812368-812463:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:804706-804828:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:800523-800661:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:799803-799862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:798991-799137:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:798178-798264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795676-795754:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:795368-795507:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:793564-793788:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:791808-791901:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790336-790425:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:787625-787801:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:780197-780296:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:779957-780011:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:778989-779111:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X8
translation: MGLFSGGHACEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSHLMGNLEEICSFQQMLVQSLEECTKMPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTEHSEELGEFMELKGASSPGILVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGSVVYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTVTKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDRLQKQTKAASAGNPSSKPHSVPSHTLPSHSITPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRVEPSDFSEDSDYDSIWTAHSYRMGSTSRSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARRDLEKLVRKVLKNMNDPAWDETNL
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(778989..779111,779957..780011,780197..780296,787625..787801,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,826982..827012))
location: region:778989-827012:-1
so has part: feature:826982-827012:-1:exon
so has part: feature:822402-822490:-1:exon
so has part: feature:812703-812797:-1:exon
so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:787625-787801:-1:exon
so has part: feature:780197-780296:-1:exon
so has part: feature:779957-780011:-1:exon
so has part: feature:778989-779111:-1:exon

XP_017911836.1
type: Protein
SIO_000068: ncbiprotein

position:827012:-1
position: 827012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826982-827012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:822402-822490:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:812703-812797:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812368-812463:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:804706-804828:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:800523-800661:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:799803-799862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:798991-799137:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:798178-798264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795676-795754:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:795368-795507:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:793564-793788:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:791808-791901:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790336-790425:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:787625-787801:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:780197-780296:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:779957-780011:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:778989-779111:-1:exon

ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018056339.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(779118..779703,779957..780011,780197..780296,787625..787801,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829039,833206..833336,835980..836064,849045..849131,877837..878314))
location: region:779118-878314:-1
so has part: feature:877837-878314:-1:exon
so has part: feature:849045-849131:-1:exon
so has part: feature:835980-836064:-1:exon
so has part: feature:833206-833336:-1:exon
so has part: feature:828838-829039:-1:exon
so has part: feature:822402-822490:-1:exon
so has part: feature:812703-812797:-1:exon
so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:787625-787801:-1:exon
so has part: feature:780197-780296:-1:exon
so has part: feature:779957-780011:-1:exon
so has part: feature:779118-779703:-1:exon

position:779118:-1
position: 779118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877837-878314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:849045-849131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835980-836064:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833206-833336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:828838-829039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822402-822490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812703-812797:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812368-812463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:804706-804828:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:800523-800661:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:799803-799862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:798991-799137:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:798178-798264:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:795676-795754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:795368-795507:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:793564-793788:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:791808-791901:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:790336-790425:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:787625-787801:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:780197-780296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:779957-780011:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:779118-779703:-1:exon

position:779703:-1
position: 779703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X2
translation: MNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSEGECLSNIREFLRGCGASLRLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGPQPAHGRTSQLFQGQYRSLDMTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSHLMGNLEEICSFQQMLVQSLEECTKMPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTEHSEELGEFMELKGASSPGILVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGSVVYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTVTKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDRLQKQTKAASAGNPSSKPHSVPSHTLPSHSITPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRVEPSDFSEDSDYDSIWTAHSYRMGSTSRSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVDTVYALKDEVQELRQVPCMVQVLEKTHKKAS
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(779653..779703,779957..780011,780197..780296,787625..787801,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829039,833206..833336,835980..836064,849045..849131,877837..878001))
location: region:779653-878001:-1
so has part: feature:877837-878001:-1:exon
so has part: feature:849045-849131:-1:exon
so has part: feature:835980-836064:-1:exon
so has part: feature:833206-833336:-1:exon
so has part: feature:828838-829039:-1:exon
so has part: feature:822402-822490:-1:exon
so has part: feature:812703-812797:-1:exon
so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:787625-787801:-1:exon
so has part: feature:780197-780296:-1:exon
so has part: feature:779957-780011:-1:exon
so has part: feature:779653-779703:-1:exon

XP_017911828.1
type: Protein
SIO_000068: ncbiprotein

position:779653:-1
position: 779653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877837-878001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:849045-849131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835980-836064:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833206-833336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:828838-829039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822402-822490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812703-812797:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812368-812463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:804706-804828:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:800523-800661:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:799803-799862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:798991-799137:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:798178-798264:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:795676-795754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:795368-795507:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:793564-793788:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:791808-791901:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:790336-790425:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:787625-787801:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:780197-780296:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:779957-780011:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:779653-779703:-1:exon

ARHGEF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARHGEF7
product: Rho guanine nucleotide exchange factor 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018056343.1
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(785012..787801,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829039,833206..833336,835980..836064,849045..849131,877837..878314))
location: region:785012-878314:-1
so has part: feature:877837-878314:-1:exon
so has part: feature:849045-849131:-1:exon
so has part: feature:835980-836064:-1:exon
so has part: feature:833206-833336:-1:exon
so has part: feature:828838-829039:-1:exon
so has part: feature:822402-822490:-1:exon
so has part: feature:812703-812797:-1:exon
so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:785012-787801:-1:exon

position:785012:-1
position: 785012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877837-878314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:849045-849131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835980-836064:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833206-833336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:828838-829039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822402-822490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812703-812797:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812368-812463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:804706-804828:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:800523-800661:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:799803-799862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:798991-799137:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:798178-798264:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:795676-795754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:795368-795507:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:793564-793788:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:791808-791901:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:790336-790425:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:785012-787801:-1:exon

ARHGEF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARHGEF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 7 isoform X4
translation: MNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSEGECLSNIREFLRGCGASLRLETFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIKSFDSLGPQPAHGRTSQLFQGQYRSLDMTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREVKPSEKPVSPKSGTLKSPPKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANTSHLMGNLEEICSFQQMLVQSLEECTKMPEAQQRVGGCFLSLMPQMKTLYLAYCANHPSAVSVLTEHSEELGEFMELKGASSPGILVLTTGLSKPFMRLDKYPALLKELERHMEDYHPDRQDIQKSMTAFKNLSAQCQEVRKRKELELQILTEAIRSWEGDDIKTLGSVVYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTVTKLEDSENHRNAFEISGSMIERILVSCNNQQDLHEWVDRLQKQTKAASAGNPSSKPHSVPSHTLPSHSITPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTMKKLLPKRKPERKPSDEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGTDLMHNHVLADDDQSSLDSLGRRSSLSRVEPSDFSEDSDYDSIWTAHSYRMGSTSRKSCCSYISHQN
SIO_010081: ARHGEF7
subclass of: SO_0000673
so part of: ARHGEF7
location: complement(join(787587..787801,790336..790425,791808..791901,793564..793788,795368..795507,795676..795754,798178..798264,798991..799137,799803..799862,800523..800661,804706..804828,812368..812463,812703..812797,822402..822490,828838..829039,833206..833336,835980..836064,849045..849131,877837..878001))
location: region:787587-878001:-1
so has part: feature:877837-878001:-1:exon
so has part: feature:849045-849131:-1:exon
so has part: feature:835980-836064:-1:exon
so has part: feature:833206-833336:-1:exon
so has part: feature:828838-829039:-1:exon
so has part: feature:822402-822490:-1:exon
so has part: feature:812703-812797:-1:exon
so has part: feature:812368-812463:-1:exon
so has part: feature:804706-804828:-1:exon
so has part: feature:800523-800661:-1:exon
so has part: feature:799803-799862:-1:exon
so has part: feature:798991-799137:-1:exon
so has part: feature:798178-798264:-1:exon
so has part: feature:795676-795754:-1:exon
so has part: feature:795368-795507:-1:exon
so has part: feature:793564-793788:-1:exon
so has part: feature:791808-791901:-1:exon
so has part: feature:790336-790425:-1:exon
so has part: feature:787587-787801:-1:exon

XP_017911832.1
type: Protein
SIO_000068: ncbiprotein

position:787587:-1
position: 787587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877837-878001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:849045-849131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835980-836064:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833206-833336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:828838-829039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822402-822490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812703-812797:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812368-812463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:804706-804828:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:800523-800661:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:799803-799862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:798991-799137:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:798178-798264:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:795676-795754:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:795368-795507:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:793564-793788:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:791808-791901:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:790336-790425:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:787587-787801:-1:exon

ANKRD10
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ANKRD10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 950318..981724
location: region:950318-981724:1
so has part: feature:950318-981724:1:exon
subclass of: SO_0000010

102172457
type: Gene
SIO_000068: ncbigene

position:950318:1
position: 950318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981724:1
position: 981724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950318-981724:1:exon

ANKRD10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ANKRD10
product: ankyrin repeat domain 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_018056350.1
SIO_010081: ANKRD10
subclass of: SO_0000673
so part of: ANKRD10
location: join(950318..950670,954354..954506,958384..958475,969238..969473,977006..977095,980200..981724)
location: region:950318-981724:1
so has part: feature:950318-950670:1:exon
so has part: feature:954354-954506:1:exon
so has part: feature:958384-958475:1:exon
so has part: feature:969238-969473:1:exon
so has part: feature:977006-977095:1:exon
so has part: feature:980200-981724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950318-950670:1:exon

position:950670:1
position: 950670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:954354-954506:1:exon

position:954354:1
position: 954354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954506:1
position: 954506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:958384-958475:1:exon

position:958384:1
position: 958384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958475:1
position: 958475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:969238-969473:1:exon

position:969238:1
position: 969238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:969473:1
position: 969473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:977006-977095:1:exon

position:977006:1
position: 977006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977095:1
position: 977095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:980200-981724:1:exon

position:980200:1
position: 980200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANKRD10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ANKRD10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 10
translation: MSAVGAGAGVEAGFSSEELLSLRFPLHRACRDGDLAALCSLLQQTPRAHLAAEDSFYGWTPVHWAAHFGKLECLIQLVRAGATLDVSTTRYAQTPAHVAAFGGHPQCLVWLIQAGASINKPDCEGETPVHKAARSGSLDCISALVANGAQVDLRNASGLTAADIAQTQGFRECTQFLLNLQNCHLTRFHHNGTLNGGHPSIFPNHVSVGTNRKRCLEDSEPLGVKRARTAAHSLDESMPLVSGEAEDDPDKMHVDRELVTDMKNSSSVSNTLTNGCVANGHSDFPSSAQPGGMESRSGQCPAGLNGVGAGLAPGPPFPSGQGSAGVNGTEEPERSPHVSPETCGSLHLDGSPSSCVASRPSWAEESLRYGHYHGFGDTAESVPELSSALEHAGPAPAEQGHHGAAHLPHGS
SIO_010081: ANKRD10
subclass of: SO_0000673
so part of: ANKRD10
location: join(950461..950670,954354..954506,958384..958475,969238..969473,977006..977095,980200..980654)
location: region:950461-980654:1
so has part: feature:950461-950670:1:exon
so has part: feature:954354-954506:1:exon
so has part: feature:958384-958475:1:exon
so has part: feature:969238-969473:1:exon
so has part: feature:977006-977095:1:exon
so has part: feature:980200-980654:1:exon

XP_017911839.1
type: Protein
SIO_000068: ncbiprotein

position:950461:1
position: 950461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980654:1
position: 980654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950461-950670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954354-954506:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958384-958475:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:969238-969473:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:977006-977095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980200-980654:1:exon

ING1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1035086..1041124)
location: region:1035086-1041124:-1
so has part: feature:1035086-1041124:-1:exon
subclass of: SO_0000010

102172167
type: Gene
SIO_000068: ncbigene

position:1035086:-1
position: 1035086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041124:-1
position: 1041124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1035086-1041124:-1:exon

ING1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ING1
product: inhibitor of growth family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 29 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_018056351.1
SIO_010081: ING1
subclass of: SO_0000673
so part of: ING1
location: complement(join(1035086..1036957,1040871..1041124))
location: region:1035086-1041124:-1
so has part: feature:1040871-1041124:-1:exon
so has part: feature:1035086-1036957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1040871-1041124:-1:exon

position:1040871:-1
position: 1040871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1035086-1036957:-1:exon

position:1036957:-1
position: 1036957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ING1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ING1
product: inhibitor of growth family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 28 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_018056352.1
SIO_010081: ING1
subclass of: SO_0000673
so part of: ING1
location: complement(join(1035086..1036957,1039280..1039462))
location: region:1035086-1039462:-1
so has part: feature:1039280-1039462:-1:exon
so has part: feature:1035086-1036957:-1:exon

position:1039462:-1
position: 1039462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039280-1039462:-1:exon

position:1039280:-1
position: 1039280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1035086-1036957:-1:exon

ING1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of growth protein 1 isoform X1
translation: MLSPANGEQIHLVNYVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDEYYERFKREADGAQKRRALHCIQRALIRSQELGDEKIQLVSQMVELVENRARQVDSHVELLEAHQEAADATGHSKAGQDKSKNEAIAQAEKPNNKRSRRQRNSENRENAANNHDHDDVTSGTPKEKKAKASKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLSHKPKGKWYCPKCRGESEKTMDKALEKSKRERAYNR
SIO_010081: ING1
subclass of: SO_0000673
so part of: ING1
location: complement(join(1036257..1036957,1040871..1041006))
location: region:1036257-1041006:-1
so has part: feature:1040871-1041006:-1:exon
so has part: feature:1036257-1036957:-1:exon

XP_017911840.1
type: Protein
SIO_000068: ncbiprotein

position:1036257:-1
position: 1036257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041006:-1
position: 1041006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1040871-1041006:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036257-1036957:-1:exon

ING1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of growth protein 1 isoform X2
translation: MQSGLLPGPRGPRERLRQILKELDEYYERFKREADGAQKRRALHCIQRALIRSQELGDEKIQLVSQMVELVENRARQVDSHVELLEAHQEAADATGHSKAGQDKSKNEAIAQAEKPNNKRSRRQRNSENRENAANNHDHDDVTSGTPKEKKAKASKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLSHKPKGKWYCPKCRGESEKTMDKALEKSKRERAYNR
SIO_010081: ING1
subclass of: SO_0000673
so part of: ING1
location: complement(join(1036257..1036957,1039280..1039331))
location: region:1036257-1039331:-1
so has part: feature:1039280-1039331:-1:exon
so has part: feature:1036257-1036957:-1:exon

XP_017911841.1
type: Protein
SIO_000068: ncbiprotein

position:1039331:-1
position: 1039331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039280-1039331:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036257-1036957:-1:exon

CARS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1048304..1066956
location: region:1048304-1066956:1
so has part: feature:1048304-1066956:1:exon
subclass of: SO_0000010

102171889
type: Gene
SIO_000068: ncbigene

position:1048304:1
position: 1048304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066956:1
position: 1066956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048304-1066956:1:exon

CARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CARS2
product: cysteinyl-tRNA synthetase 2, mitochondrial (putative), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 48 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_018056354.1
SIO_010081: CARS2
subclass of: SO_0000673
so part of: CARS2
location: join(1048304..1048518,1048879..1048929,1052543..1052660,1058047..1058118,1058216..1058321,1059023..1059106,1060061..1060190,1060520..1060653,1063297..1063364,1063979..1064045,1064357..1064495,1065194..1065317,1065713..1065811,1066485..1066691,1066833..1066956)
location: region:1048304-1066956:1
so has part: feature:1048304-1048518:1:exon
so has part: feature:1048879-1048929:1:exon
so has part: feature:1052543-1052660:1:exon
so has part: feature:1058047-1058118:1:exon
so has part: feature:1058216-1058321:1:exon
so has part: feature:1059023-1059106:1:exon
so has part: feature:1060061-1060190:1:exon
so has part: feature:1060520-1060653:1:exon
so has part: feature:1063297-1063364:1:exon
so has part: feature:1063979-1064045:1:exon
so has part: feature:1064357-1064495:1:exon
so has part: feature:1065194-1065317:1:exon
so has part: feature:1065713-1065811:1:exon
so has part: feature:1066485-1066691:1:exon
so has part: feature:1066833-1066956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1048304-1048518:1:exon

position:1048518:1
position: 1048518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1048879-1048929:1:exon

position:1048879:1
position: 1048879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048929:1
position: 1048929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1052543-1052660:1:exon

position:1052543:1
position: 1052543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052660:1
position: 1052660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1058047-1058118:1:exon

position:1058047:1
position: 1058047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058118:1
position: 1058118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1058216-1058321:1:exon

position:1058216:1
position: 1058216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058321:1
position: 1058321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1059023-1059106:1:exon

position:1059023:1
position: 1059023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059106:1
position: 1059106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1060061-1060190:1:exon

position:1060061:1
position: 1060061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060190:1
position: 1060190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1060520-1060653:1:exon

position:1060520:1
position: 1060520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060653:1
position: 1060653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1063297-1063364:1:exon

position:1063297:1
position: 1063297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063364:1
position: 1063364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1063979-1064045:1:exon

position:1063979:1
position: 1063979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064045:1
position: 1064045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1064357-1064495:1:exon

position:1064357:1
position: 1064357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064495:1
position: 1064495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1065194-1065317:1:exon

position:1065194:1
position: 1065194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065317:1
position: 1065317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1065713-1065811:1:exon

position:1065713:1
position: 1065713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065811:1
position: 1065811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1066485-1066691:1:exon

position:1066485:1
position: 1066485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066691:1
position: 1066691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1066833-1066956:1:exon

position:1066833:1
position: 1066833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CARS2
product: cysteinyl-tRNA synthetase 2, mitochondrial (putative), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_018056353.1
SIO_010081: CARS2
subclass of: SO_0000673
so part of: CARS2
location: join(1048304..1048518,1048879..1048929,1052543..1052660,1058047..1058118,1058216..1058321,1059023..1059106,1060061..1060190,1060520..1060653,1063297..1063364,1063979..1064045,1064357..1064495,1065194..1065317,1065713..1065811,1066485..1066691,1066838..1066956)
location: region:1048304-1066956:1
so has part: feature:1048304-1048518:1:exon
so has part: feature:1048879-1048929:1:exon
so has part: feature:1052543-1052660:1:exon
so has part: feature:1058047-1058118:1:exon
so has part: feature:1058216-1058321:1:exon
so has part: feature:1059023-1059106:1:exon
so has part: feature:1060061-1060190:1:exon
so has part: feature:1060520-1060653:1:exon
so has part: feature:1063297-1063364:1:exon
so has part: feature:1063979-1064045:1:exon
so has part: feature:1064357-1064495:1:exon
so has part: feature:1065194-1065317:1:exon
so has part: feature:1065713-1065811:1:exon
so has part: feature:1066485-1066691:1:exon
so has part: feature:1066838-1066956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1048304-1048518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048879-1048929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1052543-1052660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058047-1058118:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1058216-1058321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1059023-1059106:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1060061-1060190:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1060520-1060653:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1063297-1063364:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1063979-1064045:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1064357-1064495:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1065194-1065317:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1065713-1065811:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1066485-1066691:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1066838-1066956:1:exon

position:1066838:1
position: 1066838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CARS2
product: cysteinyl-tRNA synthetase 2, mitochondrial (putative), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_018056355.1
SIO_010081: CARS2
subclass of: SO_0000673
so part of: CARS2
location: join(1048304..1048518,1048879..1048929,1052543..1052660,1058047..1058118,1058216..1058321,1059023..1059106,1063297..1063364,1063979..1064045,1064357..1064495,1065194..1065317,1065713..1065811,1066485..1066691,1066838..1066956)
location: region:1048304-1066956:1
so has part: feature:1048304-1048518:1:exon
so has part: feature:1048879-1048929:1:exon
so has part: feature:1052543-1052660:1:exon
so has part: feature:1058047-1058118:1:exon
so has part: feature:1058216-1058321:1:exon
so has part: feature:1059023-1059106:1:exon
so has part: feature:1063297-1063364:1:exon
so has part: feature:1063979-1064045:1:exon
so has part: feature:1064357-1064495:1:exon
so has part: feature:1065194-1065317:1:exon
so has part: feature:1065713-1065811:1:exon
so has part: feature:1066485-1066691:1:exon
so has part: feature:1066838-1066956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1048304-1048518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048879-1048929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1052543-1052660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058047-1058118:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1058216-1058321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1059023-1059106:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1063297-1063364:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1063979-1064045:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1064357-1064495:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1065194-1065317:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1065713-1065811:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1066485-1066691:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1066838-1066956:1:exon

CARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable cysteine--tRNA ligase, mitochondrial isoform X1
translation: MLGTRRVCAAAWLLRAALGPEPGRSASGARGQGWLQPAGYDTGVKVYNSLTRRKDPLIVSRADAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFGCNVVMVMGITDVDDKIIRRANEMSVSPASLARLYEEDFKQDMAALKVLPPTAYLRVTEHVPQIITFIERLIANGHAYCTAKGNVYFDLRSRGDRYGKLAGVAPGPAGEPVDSDKRHASDFALWKAAKPQEPFWGSPWGNGRPGWHIECSTIASLVFGSRLDIHSGGVDLAFPHHENEIAQCEAFHQCPQWGNYFLHSGHLHVKGGGEKMSKSLKNYITIKDFLRSASPDVFRLFCLRSSYRSAIDYSEGALLEARRLLRATAAFVEDARAYVRGQLAGGPVQEDVLWERLGRTKAAVQAALADDFDTVRAVDAVMDLVHHGNRQLKAAAEEPRGARSPAVLGAIVASVEQFFETVGISLAERQCVPGAGSPAALHSLVEELVRFRLKVRQFALASGEAPGEARQQRLLERQPLLEACDTLRRDLAVHGISIKERLVHVGAAGSEDRRPQTQELRTATVLRPLSHSKAFM
SIO_010081: CARS2
subclass of: SO_0000673
so part of: CARS2
location: join(1048319..1048518,1048879..1048929,1052543..1052660,1058047..1058118,1058216..1058321,1059023..1059106,1060061..1060190,1060520..1060653,1063297..1063364,1063979..1064045,1064357..1064495,1065194..1065317,1065713..1065811,1066485..1066691,1066838..1066951)
location: region:1048319-1066951:1
so has part: feature:1048319-1048518:1:exon
so has part: feature:1048879-1048929:1:exon
so has part: feature:1052543-1052660:1:exon
so has part: feature:1058047-1058118:1:exon
so has part: feature:1058216-1058321:1:exon
so has part: feature:1059023-1059106:1:exon
so has part: feature:1060061-1060190:1:exon
so has part: feature:1060520-1060653:1:exon
so has part: feature:1063297-1063364:1:exon
so has part: feature:1063979-1064045:1:exon
so has part: feature:1064357-1064495:1:exon
so has part: feature:1065194-1065317:1:exon
so has part: feature:1065713-1065811:1:exon
so has part: feature:1066485-1066691:1:exon
so has part: feature:1066838-1066951:1:exon

XP_017911842.1
type: Protein
SIO_000068: ncbiprotein

position:1048319:1
position: 1048319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066951:1
position: 1066951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048319-1048518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048879-1048929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1052543-1052660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058047-1058118:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1058216-1058321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1059023-1059106:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1060061-1060190:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1060520-1060653:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1063297-1063364:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1063979-1064045:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1064357-1064495:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1065194-1065317:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1065713-1065811:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1066485-1066691:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1066838-1066951:1:exon

CARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable cysteine--tRNA ligase, mitochondrial isoform X3
translation: MLGTRRVCAAAWLLRAALGPEPGRSASGARGQGWLQPAGYDTGVKVYNSLTRRKDPLIVSRADAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFGCNVVMVMGITDVDDKIIRRANEMSVSPASLARLYEEDFKQDMAALKVLPPTAYLRVTEHVPQIITFIERLIANGHAYCTAKGNVYFDLRSRGDRYGKLAGVAPGPAGEPGHLHVKGGGEKMSKSLKNYITIKDFLRSASPDVFRLFCLRSSYRSAIDYSEGALLEARRLLRATAAFVEDARAYVRGQLAGGPVQEDVLWERLGRTKAAVQAALADDFDTVRAVDAVMDLVHHGNRQLKAAAEEPRGARSPAVLGAIVASVEQFFETVGISLAERQCVPGAGSPAALHSLVEELVRFRLKVRQFALASGEAPGEARQQRLLERQPLLEACDTLRRDLAVHGISIKERLVHVGAAGSEDRRPQTQELRTATVLRPLSHSKAFM
SIO_010081: CARS2
subclass of: SO_0000673
so part of: CARS2
location: join(1048319..1048518,1048879..1048929,1052543..1052660,1058047..1058118,1058216..1058321,1059023..1059106,1063297..1063364,1063979..1064045,1064357..1064495,1065194..1065317,1065713..1065811,1066485..1066691,1066838..1066951)
location: region:1048319-1066951:1
so has part: feature:1048319-1048518:1:exon
so has part: feature:1048879-1048929:1:exon
so has part: feature:1052543-1052660:1:exon
so has part: feature:1058047-1058118:1:exon
so has part: feature:1058216-1058321:1:exon
so has part: feature:1059023-1059106:1:exon
so has part: feature:1063297-1063364:1:exon
so has part: feature:1063979-1064045:1:exon
so has part: feature:1064357-1064495:1:exon
so has part: feature:1065194-1065317:1:exon
so has part: feature:1065713-1065811:1:exon
so has part: feature:1066485-1066691:1:exon
so has part: feature:1066838-1066951:1:exon

XP_017911844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1048319-1048518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048879-1048929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1052543-1052660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058047-1058118:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1058216-1058321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1059023-1059106:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1063297-1063364:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1063979-1064045:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1064357-1064495:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1065194-1065317:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1065713-1065811:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1066485-1066691:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1066838-1066951:1:exon

CARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable cysteine--tRNA ligase, mitochondrial isoform X2
translation: MLGTRRVCAAAWLLRAALGPEPGRSASGARGQGWLQPAGYDTGVKVYNSLTRRKDPLIVSRADAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFGCNVVMVMGITDVDDKIIRRANEMSVSPASLARLYEEDFKQDMAALKVLPPTAYLRVTEHVPQIITFIERLIANGHAYCTAKGNVYFDLRSRGDRYGKLAGVAPGPAGEPVDSDKRHASDFALWKAAKPQEPFWGSPWGNGRPGWHIECSTIASLVFGSRLDIHSGGVDLAFPHHENEIAQCEAFHQCPQWGNYFLHSGHLHVKGGGEKMSKSLKNYITIKDFLRSASPDVFRLFCLRSSYRSAIDYSEGALLEARRLLRATAAFVEDARAYVRGQLAGGPVQEDVLWERLGRTKAAVQAALADDFDTVRAVDAVMDLVHHGNRQLKAAAEEPRGARSPAVLGAIVASVEQFFETVGISLAERQCVPGAGSPAALHSLVEELVRFRLKVRQFALASGEAPGEARQQRLLERQPLLEACDTLRRDLAVHGISIKDRSGSSTWELLDQRTEDPKPRS
SIO_010081: CARS2
subclass of: SO_0000673
so part of: CARS2
location: join(1048319..1048518,1048879..1048929,1052543..1052660,1058047..1058118,1058216..1058321,1059023..1059106,1060061..1060190,1060520..1060653,1063297..1063364,1063979..1064045,1064357..1064495,1065194..1065317,1065713..1065811,1066485..1066691,1066833..1066901)
location: region:1048319-1066901:1
so has part: feature:1048319-1048518:1:exon
so has part: feature:1048879-1048929:1:exon
so has part: feature:1052543-1052660:1:exon
so has part: feature:1058047-1058118:1:exon
so has part: feature:1058216-1058321:1:exon
so has part: feature:1059023-1059106:1:exon
so has part: feature:1060061-1060190:1:exon
so has part: feature:1060520-1060653:1:exon
so has part: feature:1063297-1063364:1:exon
so has part: feature:1063979-1064045:1:exon
so has part: feature:1064357-1064495:1:exon
so has part: feature:1065194-1065317:1:exon
so has part: feature:1065713-1065811:1:exon
so has part: feature:1066485-1066691:1:exon
so has part: feature:1066833-1066901:1:exon

XP_017911843.1
type: Protein
SIO_000068: ncbiprotein

position:1066901:1
position: 1066901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048319-1048518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048879-1048929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1052543-1052660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058047-1058118:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1058216-1058321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1059023-1059106:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1060061-1060190:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1060520-1060653:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1063297-1063364:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1063979-1064045:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1064357-1064495:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1065194-1065317:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1065713-1065811:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1066485-1066691:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1066833-1066901:1:exon

CARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CARS2
product: cysteinyl-tRNA synthetase 2, mitochondrial (putative), transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_018056356.1
SIO_010081: CARS2
subclass of: SO_0000673
so part of: CARS2
location: join(1048504..1048518,1048879..1048929,1058047..1058118,1058216..1058321,1059023..1059106,1060061..1060190,1060520..1060653,1063297..1063364,1063979..1064045,1064357..1064495,1065194..1065317,1065713..1065811,1066485..1066691,1066838..1066956)
location: region:1048504-1066956:1
so has part: feature:1048504-1048518:1:exon
so has part: feature:1048879-1048929:1:exon
so has part: feature:1058047-1058118:1:exon
so has part: feature:1058216-1058321:1:exon
so has part: feature:1059023-1059106:1:exon
so has part: feature:1060061-1060190:1:exon
so has part: feature:1060520-1060653:1:exon
so has part: feature:1063297-1063364:1:exon
so has part: feature:1063979-1064045:1:exon
so has part: feature:1064357-1064495:1:exon
so has part: feature:1065194-1065317:1:exon
so has part: feature:1065713-1065811:1:exon
so has part: feature:1066485-1066691:1:exon
so has part: feature:1066838-1066956:1:exon

position:1048504:1
position: 1048504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048504-1048518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048879-1048929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1058047-1058118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058216-1058321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1059023-1059106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1060061-1060190:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1060520-1060653:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1063297-1063364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1063979-1064045:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1064357-1064495:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1065194-1065317:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1065713-1065811:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1066485-1066691:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1066838-1066956:1:exon

CARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable cysteine--tRNA ligase, mitochondrial isoform X4
translation: MSVSPASLARLYEEDFKQDMAALKVLPPTAYLRVTEHVPQIITFIERLIANGHAYCTAKGNVYFDLRSRGDRYGKLAGVAPGPAGEPVDSDKRHASDFALWKAAKPQEPFWGSPWGNGRPGWHIECSTIASLVFGSRLDIHSGGVDLAFPHHENEIAQCEAFHQCPQWGNYFLHSGHLHVKGGGEKMSKSLKNYITIKDFLRSASPDVFRLFCLRSSYRSAIDYSEGALLEARRLLRATAAFVEDARAYVRGQLAGGPVQEDVLWERLGRTKAAVQAALADDFDTVRAVDAVMDLVHHGNRQLKAAAEEPRGARSPAVLGAIVASVEQFFETVGISLAERQCVPGAGSPAALHSLVEELVRFRLKVRQFALASGEAPGEARQQRLLERQPLLEACDTLRRDLAVHGISIKERLVHVGAAGSEDRRPQTQELRTATVLRPLSHSKAFM
SIO_010081: CARS2
subclass of: SO_0000673
so part of: CARS2
location: join(1058047..1058118,1058216..1058321,1059023..1059106,1060061..1060190,1060520..1060653,1063297..1063364,1063979..1064045,1064357..1064495,1065194..1065317,1065713..1065811,1066485..1066691,1066838..1066951)
location: region:1058047-1066951:1
so has part: feature:1058047-1058118:1:exon
so has part: feature:1058216-1058321:1:exon
so has part: feature:1059023-1059106:1:exon
so has part: feature:1060061-1060190:1:exon
so has part: feature:1060520-1060653:1:exon
so has part: feature:1063297-1063364:1:exon
so has part: feature:1063979-1064045:1:exon
so has part: feature:1064357-1064495:1:exon
so has part: feature:1065194-1065317:1:exon
so has part: feature:1065713-1065811:1:exon
so has part: feature:1066485-1066691:1:exon
so has part: feature:1066838-1066951:1:exon

XP_017911845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1058047-1058118:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1058216-1058321:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059023-1059106:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1060061-1060190:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1060520-1060653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1063297-1063364:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1063979-1064045:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1064357-1064495:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1065194-1065317:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1065713-1065811:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1066485-1066691:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1066838-1066951:1:exon

NAXD
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: NAXD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1068034..1080657)
location: region:1068034-1080657:-1
so has part: feature:1068034-1080657:-1:exon
subclass of: SO_0000010

102171618
type: Gene
SIO_000068: ncbigene

position:1068034:-1
position: 1068034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080657:-1
position: 1080657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068034-1080657:-1:exon

NAXD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NAXD
product: NAD(P)HX dehydratase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_018056360.1
SIO_010081: NAXD
subclass of: SO_0000673
so part of: NAXD
location: complement(join(1068034..1069272,1070282..1070402,1071339..1071459,1072210..1072314,1072395..1072445,1074688..1074796,1075521..1075609,1076292..1076337,1077077..1077224,1080543..1080657))
location: region:1068034-1080657:-1
so has part: feature:1080543-1080657:-1:exon
so has part: feature:1077077-1077224:-1:exon
so has part: feature:1076292-1076337:-1:exon
so has part: feature:1075521-1075609:-1:exon
so has part: feature:1074688-1074796:-1:exon
so has part: feature:1072395-1072445:-1:exon
so has part: feature:1072210-1072314:-1:exon
so has part: feature:1071339-1071459:-1:exon
so has part: feature:1070282-1070402:-1:exon
so has part: feature:1068034-1069272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1080543-1080657:-1:exon

position:1080543:-1
position: 1080543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1077077-1077224:-1:exon

position:1077077:-1
position: 1077077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077224:-1
position: 1077224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1076292-1076337:-1:exon

position:1076292:-1
position: 1076292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076337:-1
position: 1076337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1075521-1075609:-1:exon

position:1075521:-1
position: 1075521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075609:-1
position: 1075609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1074688-1074796:-1:exon

position:1074688:-1
position: 1074688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074796:-1
position: 1074796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1072395-1072445:-1:exon

position:1072395:-1
position: 1072395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072445:-1
position: 1072445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1072210-1072314:-1:exon

position:1072210:-1
position: 1072210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072314:-1
position: 1072314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1071339-1071459:-1:exon

position:1071339:-1
position: 1071339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071459:-1
position: 1071459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1070282-1070402:-1:exon

position:1070282:-1
position: 1070282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070402:-1
position: 1070402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1068034-1069272:-1:exon

position:1069272:-1
position: 1069272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAXD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NAXD
product: NAD(P)HX dehydratase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_018056358.1
SIO_010081: NAXD
subclass of: SO_0000673
so part of: NAXD
location: complement(join(1068034..1069379,1070282..1070402,1071339..1071459,1072210..1072314,1072395..1072445,1074688..1074796,1075521..1075609,1076292..1076337,1077077..1077224,1080543..1080657))
location: region:1068034-1080657:-1
so has part: feature:1080543-1080657:-1:exon
so has part: feature:1077077-1077224:-1:exon
so has part: feature:1076292-1076337:-1:exon
so has part: feature:1075521-1075609:-1:exon
so has part: feature:1074688-1074796:-1:exon
so has part: feature:1072395-1072445:-1:exon
so has part: feature:1072210-1072314:-1:exon
so has part: feature:1071339-1071459:-1:exon
so has part: feature:1070282-1070402:-1:exon
so has part: feature:1068034-1069379:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1080543-1080657:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077077-1077224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1076292-1076337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075521-1075609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074688-1074796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072395-1072445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072210-1072314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1071339-1071459:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1070282-1070402:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1068034-1069379:-1:exon

position:1069379:-1
position: 1069379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAXD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NAXD
product: NAD(P)HX dehydratase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_018056359.1
SIO_010081: NAXD
subclass of: SO_0000673
so part of: NAXD
location: complement(join(1068034..1069272,1070282..1070402,1071339..1071459,1072210..1072314,1072395..1072445,1074688..1074796,1075521..1075609,1076292..1076337,1077077..1077224,1080422..1080535))
location: region:1068034-1080535:-1
so has part: feature:1080422-1080535:-1:exon
so has part: feature:1077077-1077224:-1:exon
so has part: feature:1076292-1076337:-1:exon
so has part: feature:1075521-1075609:-1:exon
so has part: feature:1074688-1074796:-1:exon
so has part: feature:1072395-1072445:-1:exon
so has part: feature:1072210-1072314:-1:exon
so has part: feature:1071339-1071459:-1:exon
so has part: feature:1070282-1070402:-1:exon
so has part: feature:1068034-1069272:-1:exon

position:1080535:-1
position: 1080535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1080422-1080535:-1:exon

position:1080422:-1
position: 1080422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1077077-1077224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1076292-1076337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075521-1075609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074688-1074796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072395-1072445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072210-1072314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1071339-1071459:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1070282-1070402:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1068034-1069272:-1:exon

NAXD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NAXD
product: NAD(P)HX dehydratase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_018056357.1
SIO_010081: NAXD
subclass of: SO_0000673
so part of: NAXD
location: complement(join(1068034..1069379,1070282..1070402,1071339..1071459,1072210..1072314,1072395..1072445,1074688..1074796,1075521..1075609,1076292..1076337,1077077..1077224,1080422..1080535))
location: region:1068034-1080535:-1
so has part: feature:1080422-1080535:-1:exon
so has part: feature:1077077-1077224:-1:exon
so has part: feature:1076292-1076337:-1:exon
so has part: feature:1075521-1075609:-1:exon
so has part: feature:1074688-1074796:-1:exon
so has part: feature:1072395-1072445:-1:exon
so has part: feature:1072210-1072314:-1:exon
so has part: feature:1071339-1071459:-1:exon
so has part: feature:1070282-1070402:-1:exon
so has part: feature:1068034-1069379:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1080422-1080535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077077-1077224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1076292-1076337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075521-1075609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074688-1074796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072395-1072445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072210-1072314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1071339-1071459:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1070282-1070402:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1068034-1069379:-1:exon

NAXD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NAXD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X2
translation: MAVGPGCRAVRGCRPALRAFSLHKAHSAKDMENTLQLVRNVVPPLTTKKHKGQDGRIGVVGGCREYTGAPYFAAISALKVGADLSHVFCTQEAAPVIKSYSPELIVHPILDSPEAVHEMEQWLPRLHALVVGPGLGRDDALLENVKGILEASKARGIPVVIDADGLWLIAQQPALIQGYRKAVLTPNHVEFGRLSEAVLGAPLEGGDRHGAVLRLSQALGNVTVVQKGEQDVISDGEQVLVCSQEGSGRRCGGQGDLLSGSLGVLAHWAIRTGPQKTGGEAASEALRLELTSVGPGTAGRMRGVRWPPLRPLPAGPARCSWPPSAPAPSPGSAASRPSRSTDVPPPPPTWSPRSGLPSAGSSRPELEPLEGGCHPPAASERSALCRLTQRQFGA
SIO_010081: NAXD
subclass of: SO_0000673
so part of: NAXD
location: complement(join(1069031..1069379,1070282..1070402,1071339..1071459,1072210..1072314,1072395..1072445,1074688..1074796,1075521..1075609,1076292..1076337,1077077..1077224,1080543..1080588))
location: region:1069031-1080588:-1
so has part: feature:1080543-1080588:-1:exon
so has part: feature:1077077-1077224:-1:exon
so has part: feature:1076292-1076337:-1:exon
so has part: feature:1075521-1075609:-1:exon
so has part: feature:1074688-1074796:-1:exon
so has part: feature:1072395-1072445:-1:exon
so has part: feature:1072210-1072314:-1:exon
so has part: feature:1071339-1071459:-1:exon
so has part: feature:1070282-1070402:-1:exon
so has part: feature:1069031-1069379:-1:exon

XP_017911847.1
type: Protein
SIO_000068: ncbiprotein

position:1069031:-1
position: 1069031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080588:-1
position: 1080588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1080543-1080588:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077077-1077224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1076292-1076337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075521-1075609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074688-1074796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072395-1072445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072210-1072314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1071339-1071459:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1070282-1070402:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1069031-1069379:-1:exon

NAXD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NAXD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X1
translation: MAVRAGAAAAGAAVVAVLSAALALYGPPLDAALRAFSLHKAHSAKDMENTLQLVRNVVPPLTTKKHKGQDGRIGVVGGCREYTGAPYFAAISALKVGADLSHVFCTQEAAPVIKSYSPELIVHPILDSPEAVHEMEQWLPRLHALVVGPGLGRDDALLENVKGILEASKARGIPVVIDADGLWLIAQQPALIQGYRKAVLTPNHVEFGRLSEAVLGAPLEGGDRHGAVLRLSQALGNVTVVQKGEQDVISDGEQVLVCSQEGSGRRCGGQGDLLSGSLGVLAHWAIRTGPQKTGGEAASEALRLELTSVGPGTAGRMRGVRWPPLRPLPAGPARCSWPPSAPAPSPGSAASRPSRSTDVPPPPPTWSPRSGLPSAGSSRPELEPLEGGCHPPAASERSALCRLTQRQFGA
SIO_010081: NAXD
subclass of: SO_0000673
so part of: NAXD
location: complement(join(1069031..1069379,1070282..1070402,1071339..1071459,1072210..1072314,1072395..1072445,1074688..1074796,1075521..1075609,1076292..1076337,1077077..1077224,1080422..1080515))
location: region:1069031-1080515:-1
so has part: feature:1080422-1080515:-1:exon
so has part: feature:1077077-1077224:-1:exon
so has part: feature:1076292-1076337:-1:exon
so has part: feature:1075521-1075609:-1:exon
so has part: feature:1074688-1074796:-1:exon
so has part: feature:1072395-1072445:-1:exon
so has part: feature:1072210-1072314:-1:exon
so has part: feature:1071339-1071459:-1:exon
so has part: feature:1070282-1070402:-1:exon
so has part: feature:1069031-1069379:-1:exon

XP_017911846.1
type: Protein
SIO_000068: ncbiprotein

position:1080515:-1
position: 1080515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1080422-1080515:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077077-1077224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1076292-1076337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075521-1075609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074688-1074796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072395-1072445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072210-1072314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1071339-1071459:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1070282-1070402:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1069031-1069379:-1:exon

NAXD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NAXD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X4
translation: MAVGPGCRAVRGCRPALRAFSLHKAHSAKDMENTLQLVRNVVPPLTTKKHKGQDGRIGVVGGCREYTGAPYFAAISALKVGADLSHVFCTQEAAPVIKSYSPELIVHPILDSPEAVHEMEQWLPRLHALVVGPGLGRDDALLENVKGILEASKARGIPVVIDADGLWLIAQQPALIQGYRKAVLTPNHVEFGRLSEAVLGAPLEGGDRHGAVLRLSQALGNVTVVQKGEQDVISDGEQVLVCSQEGSGRRCGGQGDLLSGSLGVLAHWAIRTGPQKTGGPSPLLVAAFGACALTRQCSQQAFQKHGRATTTSDMVAEVGPAFRRLFEA
SIO_010081: NAXD
subclass of: SO_0000673
so part of: NAXD
location: complement(join(1069122..1069272,1070282..1070402,1071339..1071459,1072210..1072314,1072395..1072445,1074688..1074796,1075521..1075609,1076292..1076337,1077077..1077224,1080543..1080588))
location: region:1069122-1080588:-1
so has part: feature:1080543-1080588:-1:exon
so has part: feature:1077077-1077224:-1:exon
so has part: feature:1076292-1076337:-1:exon
so has part: feature:1075521-1075609:-1:exon
so has part: feature:1074688-1074796:-1:exon
so has part: feature:1072395-1072445:-1:exon
so has part: feature:1072210-1072314:-1:exon
so has part: feature:1071339-1071459:-1:exon
so has part: feature:1070282-1070402:-1:exon
so has part: feature:1069122-1069272:-1:exon

XP_017911849.1
type: Protein
SIO_000068: ncbiprotein

position:1069122:-1
position: 1069122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1080543-1080588:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077077-1077224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1076292-1076337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075521-1075609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074688-1074796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072395-1072445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072210-1072314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1071339-1071459:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1070282-1070402:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1069122-1069272:-1:exon

NAXD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NAXD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X3
translation: MAVRAGAAAAGAAVVAVLSAALALYGPPLDAALRAFSLHKAHSAKDMENTLQLVRNVVPPLTTKKHKGQDGRIGVVGGCREYTGAPYFAAISALKVGADLSHVFCTQEAAPVIKSYSPELIVHPILDSPEAVHEMEQWLPRLHALVVGPGLGRDDALLENVKGILEASKARGIPVVIDADGLWLIAQQPALIQGYRKAVLTPNHVEFGRLSEAVLGAPLEGGDRHGAVLRLSQALGNVTVVQKGEQDVISDGEQVLVCSQEGSGRRCGGQGDLLSGSLGVLAHWAIRTGPQKTGGPSPLLVAAFGACALTRQCSQQAFQKHGRATTTSDMVAEVGPAFRRLFEA
SIO_010081: NAXD
subclass of: SO_0000673
so part of: NAXD
location: complement(join(1069122..1069272,1070282..1070402,1071339..1071459,1072210..1072314,1072395..1072445,1074688..1074796,1075521..1075609,1076292..1076337,1077077..1077224,1080422..1080515))
location: region:1069122-1080515:-1
so has part: feature:1080422-1080515:-1:exon
so has part: feature:1077077-1077224:-1:exon
so has part: feature:1076292-1076337:-1:exon
so has part: feature:1075521-1075609:-1:exon
so has part: feature:1074688-1074796:-1:exon
so has part: feature:1072395-1072445:-1:exon
so has part: feature:1072210-1072314:-1:exon
so has part: feature:1071339-1071459:-1:exon
so has part: feature:1070282-1070402:-1:exon
so has part: feature:1069122-1069272:-1:exon

XP_017911848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1080422-1080515:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077077-1077224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1076292-1076337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1075521-1075609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074688-1074796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072395-1072445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072210-1072314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1071339-1071459:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1070282-1070402:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1069122-1069272:-1:exon

RAB20
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: RAB20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1104601..1137141
location: region:1104601-1137141:1
so has part: feature:1104601-1137141:1:exon
subclass of: SO_0000010

102183802
type: Gene
SIO_000068: ncbigene

position:1104601:1
position: 1104601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137141:1
position: 1137141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104601-1137141:1:exon

RAB20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RAB20
product: RAB20, member RAS oncogene family, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_018056361.1
SIO_010081: RAB20
subclass of: SO_0000673
so part of: RAB20
location: join(1104601..1104922,1105466..1105783,1136141..1137141)
location: region:1104601-1137141:1
so has part: feature:1104601-1104922:1:exon
so has part: feature:1105466-1105783:1:exon
so has part: feature:1136141-1137141:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1104601-1104922:1:exon

position:1104922:1
position: 1104922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1105466-1105783:1:exon

position:1105466:1
position: 1105466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105783:1
position: 1105783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1136141-1137141:1:exon

position:1136141:1
position: 1136141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: RAB20
product: RAB20, member RAS oncogene family, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_018056362.1
SIO_010081: RAB20
subclass of: SO_0000673
so part of: RAB20
location: join(1105073..1105150,1105466..1105783,1136141..1137141)
location: region:1105073-1137141:1
so has part: feature:1105073-1105150:1:exon
so has part: feature:1105466-1105783:1:exon
so has part: feature:1136141-1137141:1:exon

position:1105073:1
position: 1105073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105073-1105150:1:exon

position:1105150:1
position: 1105150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1105466-1105783:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1136141-1137141:1:exon

RAB20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RAB20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-20
translation: MRKPDGKIVLLGDMNVGKTSLLQRYMERRFPDTVSTVGGAFYLKQWRSFNISIWDTAGREQFHGLGSMYCRGAAAVILTYDVNHAQSLLELEDRFLGLTDTASADCLFAVVGNKVDLIEEAPGEGGQGGGRDPGQAGGGGGGSPAPRPSRQVQLEDAVAFYKKILKYKMLDEKDVPAAEQMCFETSAKTGKNVDLLFETVFDMVVPVILRQRAQALPQTVDIASAPLPAQTRSGCCS
SIO_010081: RAB20
subclass of: SO_0000673
so part of: RAB20
location: join(1105612..1105783,1136141..1136682)
location: region:1105612-1136682:1
so has part: feature:1105612-1105783:1:exon
so has part: feature:1136141-1136682:1:exon

XP_017911850.1
type: Protein
SIO_000068: ncbiprotein

position:1105612:1
position: 1105612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136682:1
position: 1136682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105612-1105783:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1136141-1136682:1:exon

RAB20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: RAB20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-20
translation: MRKPDGKIVLLGDMNVGKTSLLQRYMERRFPDTVSTVGGAFYLKQWRSFNISIWDTAGREQFHGLGSMYCRGAAAVILTYDVNHAQSLLELEDRFLGLTDTASADCLFAVVGNKVDLIEEAPGEGGQGGGRDPGQAGGGGGGSPAPRPSRQVQLEDAVAFYKKILKYKMLDEKDVPAAEQMCFETSAKTGKNVDLLFETVFDMVVPVILRQRAQALPQTVDIASAPLPAQTRSGCCS
SIO_010081: RAB20
subclass of: SO_0000673
so part of: RAB20
location: join(1105612..1105783,1136141..1136682)
location: region:1105612-1136682:1
so has part: feature:1105612-1105783:1:exon
so has part: feature:1136141-1136682:1:exon

XP_017911851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1105612-1105783:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1136141-1136682:1:exon

COL4A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: COL4A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1145089..1301982)
location: region:1145089-1301982:-1
so has part: feature:1145089-1301982:-1:exon
subclass of: SO_0000010

102171347
type: Gene
SIO_000068: ncbigene

position:1145089:-1
position: 1145089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301982:-1
position: 1301982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145089-1301982:-1:exon

COL4A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: COL4A2
product: collagen type IV alpha 2 chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 144 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_018056363.1
SIO_010081: COL4A2
subclass of: SO_0000673
so part of: COL4A2
location: complement(join(1145089..1146138,1147869..1148155,1148467..1148658,1149796..1149912,1150019..1150165,1150341..1150439,1150557..1150718,1151397..1151513,1153639..1153764,1155162..1155233,1156144..1156251,1156828..1156935,1158963..1159037,1159227..1159290,1159936..1160117,1160330..1160452,1161712..1161855,1162532..1162702,1163328..1163489,1165075..1165296,1167533..1167640,1168393..1168449,1169948..1170007,1170353..1170554,1171555..1171661,1171747..1171819,1174730..1174887,1175138..1175230,1178908..1179057,1179466..1179576,1181531..1181597,1182298..1182351,1184327..1184371,1185435..1185485,1186043..1186078,1188641..1188739,1189569..1189610,1192028..1192063,1193783..1193845,1193949..1193984,1194323..1194394,1195865..1195981,1198227..1198271,1198358..1198492,1251867..1251947,1301220..1301274,1301377..1301464,1301742..1301982))
location: region:1145089-1301982:-1
so has part: feature:1301742-1301982:-1:exon
so has part: feature:1301377-1301464:-1:exon
so has part: feature:1301220-1301274:-1:exon
so has part: feature:1251867-1251947:-1:exon
so has part: feature:1198358-1198492:-1:exon
so has part: feature:1198227-1198271:-1:exon
so has part: feature:1195865-1195981:-1:exon
so has part: feature:1194323-1194394:-1:exon
so has part: feature:1193949-1193984:-1:exon
so has part: feature:1193783-1193845:-1:exon
so has part: feature:1192028-1192063:-1:exon
so has part: feature:1189569-1189610:-1:exon
so has part: feature:1188641-1188739:-1:exon
so has part: feature:1186043-1186078:-1:exon
so has part: feature:1185435-1185485:-1:exon
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urn:…
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urn:…
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SIO_000300: 30
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SIO_000300: 31
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SIO_000300: 32
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SIO_000300: 44
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SIO_000300: 46
SIO_000628: feature:1148467-1148658:-1:exon

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SIO_000300: 47
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SIO_000300: 48
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COL4A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: COL4A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-2(IV) chain
translation: MDRELRAAARPALRRWLLLGAVTVGLLAQSVLAGVKKLDVPCGGRDCSGGCQCYPEKGGRGQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVGPRGVSGFPGADGIPGHPGQGGPRGPPGYDGCNGTMGDSGYAGPPGPGGFLGPRGPQGPKGQKGEPYALSSEDRDKYRGEPGEPGLVGLQGPPGRPGPVGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKGEKGDMGLQGPGGIPPDNGYVEKPTPGYELLPEQYKGEKGSEGEPGRMGVSLKGEEGVMGFSGPRGAPGFDGEKGLLGQKGSRGLDGYQGPDGLPGPKGEMGDPGPPGLPAYSPHPSVAKGVRGEPGSPGAPGEPGARGEPGDPGLPGQPGTTIGDEDEKRGLPGEMGPKGFTGERGFPALYPGPPGADGKPGLRGPPGRPGPPGPDGFLFGLKGATGSGGFPGSSGFPGARGQKGWKGDAGDCKCADQFIRGPPGLPGPKGFAGANGQPGSKGSQGDPGPHGLPGFSGFKGAPGNVGPPGPKGMKGDSRTITTKGERGQPGVPGVPGLKGTDGIPGPPGLDGFHGLPGPPGDGIKGPRGDAGQPGAPGTKGLPGERGPPGLGLPGPKGERGFPGDAGLPGPPGFPGPPGLPGAPGQTDCDSGVKRPIGADGQETIQPGCVGGPKGSPGQPGLPGPPGAKGLRGVPGFSGADGVPGLKGLPGDPGREGFPGPPGFMGPRGSKGAVGPPGLDGLPGASGLPGPAGPPGDRGLPGEVLGAQPGPRGDSGLPGRPGLKGPPGERGPPGFRGSQGMPGMPGQKGQPGSPGFSGQPGLPGAPGQHGFPGAPGREGPLGPPGAPGFEGLPGDRGEPGDTGVPGPVGRKGGSGDRGDPGQQGERGHPGLPGFKGVSGMPGTPGLKGARGSPGMDGFEGMLGLKGRPGLPGIKGEAGFFGIPGLKGLAGEPGVKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGLPGMPGIPGLSGIPGLPGRPGHIKGVKGDTGVPGVPGSPGFPGVPGSPGVMGFQGFTGSRGDKGAPGRAGLFGEVGETGDFGDIGDTIDLPGSPGLKGERGTTGIPGQKGFLGERGTEGDVGFPGITGLAGVQGPPGFQGQKGFPGLTGLQGPQGDPGRAGAPGIKGDSGWPGNPGLPGLPGLRGISGLHGLPGNKGFPGSPGADVHGDPGFPGPAGDKGDPGEANTLPGPTGAPGQKGERGAPGERGPIGSPGLQGFPGITPPSNISGSPGDIGAPGIFGLEGYRGPPGPPGPAALPGSKGDEGSPGTPGNPGIKGWVGDPGPQGRPGVFGLPGEKGPKGEPGFMGNIGPTGSPGDRGPRGPKGDRGLPGAPGAVGAPGITGIPQRIAVERGPVGPQGRRGPPGAQGEMGPQGPPGEPGFRGAQGKAGPQGRGGVSAVPGFRGDQGPVGLQGPVGFEGEPGRPGSPGLPGMPGRSISIGYLLVKHSQTDKEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYYASRNDKSYWLSTTAPLPMMPVAEEDIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYYANKYSFWLTTIPEQSFQGAPSADTLKAGLIRTHISRCQVCMKNL
SIO_010081: COL4A2
subclass of: SO_0000673
so part of: COL4A2
location: complement(join(1145881..1146138,1147869..1148155,1148467..1148658,1149796..1149912,1150019..1150165,1150341..1150439,1150557..1150718,1151397..1151513,1153639..1153764,1155162..1155233,1156144..1156251,1156828..1156935,1158963..1159037,1159227..1159290,1159936..1160117,1160330..1160452,1161712..1161855,1162532..1162702,1163328..1163489,1165075..1165296,1167533..1167640,1168393..1168449,1169948..1170007,1170353..1170554,1171555..1171661,1171747..1171819,1174730..1174887,1175138..1175230,1178908..1179057,1179466..1179576,1181531..1181597,1182298..1182351,1184327..1184371,1185435..1185485,1186043..1186078,1188641..1188739,1189569..1189610,1192028..1192063,1193783..1193845,1193949..1193984,1194323..1194394,1195865..1195981,1198227..1198271,1198358..1198492,1251867..1251947,1301220..1301274,1301377..1301420))
location: region:1145881-1301420:-1
so has part: feature:1301377-1301420:-1:exon
so has part: feature:1301220-1301274:-1:exon
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so has part: feature:1149796-1149912:-1:exon
so has part: feature:1148467-1148658:-1:exon
so has part: feature:1147869-1148155:-1:exon
so has part: feature:1145881-1146138:-1:exon

XP_017911852.1
type: Protein
SIO_000068: ncbiprotein

position:1145881:-1
position: 1145881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301420:-1
position: 1301420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1301377-1301420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1301220-1301274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1251867-1251947:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1198358-1198492:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1198227-1198271:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1195865-1195981:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1194323-1194394:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1193949-1193984:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1193783-1193845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1192028-1192063:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1189569-1189610:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1188641-1188739:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1186043-1186078:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1185435-1185485:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1184327-1184371:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1182298-1182351:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1181531-1181597:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1179466-1179576:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1178908-1179057:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1175138-1175230:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1174730-1174887:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1171747-1171819:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1171555-1171661:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1170353-1170554:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1169948-1170007:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1168393-1168449:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1167533-1167640:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1165075-1165296:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1163328-1163489:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1162532-1162702:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1161712-1161855:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1160330-1160452:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1159936-1160117:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1159227-1159290:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1158963-1159037:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1156828-1156935:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1156144-1156251:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1155162-1155233:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1153639-1153764:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1151397-1151513:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1150557-1150718:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1150341-1150439:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1150019-1150165:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1149796-1149912:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1148467-1148658:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1147869-1148155:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1145881-1146138:-1:exon

COL4A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: COL4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1302093..1432028
location: region:1302093-1432028:1
so has part: feature:1302093-1432028:1:exon
subclass of: SO_0000010

102171079
type: Gene
SIO_000068: ncbigene

position:1302093:1
position: 1302093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432028:1
position: 1432028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1302093-1432028:1:exon

COL4A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: COL4A1
product: collagen type IV alpha 1 chain
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 400 ESTs, 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_018056364.1
SIO_010081: COL4A1
subclass of: SO_0000673
so part of: COL4A1
location: join(1302093..1302330,1354113..1354172,1378338..1378427,1378524..1378568,1379654..1379698,1379803..1379865,1380356..1380409,1380553..1380579,1382391..1382474,1382559..1382621,1383930..1383965,1384492..1384533,1385725..1385811,1386257..1386283,1386451..1386501,1387468..1387512,1387598..1387651,1389239..1389280,1390147..1390231,1390383..1390418,1392282..1392446,1394922..1395017,1396366..1396449,1397001..1397071,1401442..1401633,1402180..1402347,1405115..1405207,1405296..1405400,1405976..1406073,1406563..1406713,1406903..1407016,1407848..1408015,1408131..1408220,1409027..1409179,1409327..1409425,1409537..1409626,1410608..1410747,1411486..1411612,1411706..1411786,1412195..1412293,1413479..1413529,1414678..1414863,1415441..1415574,1417023..1417095,1417962..1418033,1419299..1419427,1420776..1420874,1421764..1421976,1423758..1423935,1427259..1427373,1428327..1428499,1430640..1432028)
location: region:1302093-1432028:1
so has part: feature:1302093-1302330:1:exon
so has part: feature:1354113-1354172:1:exon
so has part: feature:1378338-1378427:1:exon
so has part: feature:1378524-1378568:1:exon
so has part: feature:1379654-1379698:1:exon
so has part: feature:1379803-1379865:1:exon
so has part: feature:1380356-1380409:1:exon
so has part: feature:1380553-1380579:1:exon
so has part: feature:1382391-1382474:1:exon
so has part: feature:1382559-1382621:1:exon
so has part: feature:1383930-1383965:1:exon
so has part: feature:1384492-1384533:1:exon
so has part: feature:1385725-1385811:1:exon
so has part: feature:1386257-1386283:1:exon
so has part: feature:1386451-1386501:1:exon
so has part: feature:1387468-1387512:1:exon
so has part: feature:1387598-1387651:1:exon
so has part: feature:1389239-1389280:1:exon
so has part: feature:1390147-1390231:1:exon
so has part: feature:1390383-1390418:1:exon
so has part: feature:1392282-1392446:1:exon
so has part: feature:1394922-1395017:1:exon
so has part: feature:1396366-1396449:1:exon
so has part: feature:1397001-1397071:1:exon
so has part: feature:1401442-1401633:1:exon
so has part: feature:1402180-1402347:1:exon
so has part: feature:1405115-1405207:1:exon
so has part: feature:1405296-1405400:1:exon
so has part: feature:1405976-1406073:1:exon
so has part: feature:1406563-1406713:1:exon
so has part: feature:1406903-1407016:1:exon
so has part: feature:1407848-1408015:1:exon
so has part: feature:1408131-1408220:1:exon
so has part: feature:1409027-1409179:1:exon
so has part: feature:1409327-1409425:1:exon
so has part: feature:1409537-1409626:1:exon
so has part: feature:1410608-1410747:1:exon
so has part: feature:1411486-1411612:1:exon
so has part: feature:1411706-1411786:1:exon
so has part: feature:1412195-1412293:1:exon
so has part: feature:1413479-1413529:1:exon
so has part: feature:1414678-1414863:1:exon
so has part: feature:1415441-1415574:1:exon
so has part: feature:1417023-1417095:1:exon
so has part: feature:1417962-1418033:1:exon
so has part: feature:1419299-1419427:1:exon
so has part: feature:1420776-1420874:1:exon
so has part: feature:1421764-1421976:1:exon
so has part: feature:1423758-1423935:1:exon
so has part: feature:1427259-1427373:1:exon
so has part: feature:1428327-1428499:1:exon
so has part: feature:1430640-1432028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1302093-1302330:1:exon

position:1302330:1
position: 1302330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1354113-1354172:1:exon

position:1354113:1
position: 1354113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1354172:1
position: 1354172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1378338-1378427:1:exon

position:1378338:1
position: 1378338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378427:1
position: 1378427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1378524-1378568:1:exon

position:1378524:1
position: 1378524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378568:1
position: 1378568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1379654-1379698:1:exon

position:1379654:1
position: 1379654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379698:1
position: 1379698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1379803-1379865:1:exon

position:1379803:1
position: 1379803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379865:1
position: 1379865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1380356-1380409:1:exon

position:1380356:1
position: 1380356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380409:1
position: 1380409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1380553-1380579:1:exon

position:1380553:1
position: 1380553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380579:1
position: 1380579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1382391-1382474:1:exon

position:1382391:1
position: 1382391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382474:1
position: 1382474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1382559-1382621:1:exon

position:1382559:1
position: 1382559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382621:1
position: 1382621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1383930-1383965:1:exon

position:1383930:1
position: 1383930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383965:1
position: 1383965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1384492-1384533:1:exon

position:1384492:1
position: 1384492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384533:1
position: 1384533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1385725-1385811:1:exon

position:1385725:1
position: 1385725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385811:1
position: 1385811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1386257-1386283:1:exon

position:1386257:1
position: 1386257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386283:1
position: 1386283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1386451-1386501:1:exon

position:1386451:1
position: 1386451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386501:1
position: 1386501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1387468-1387512:1:exon

position:1387468:1
position: 1387468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387512:1
position: 1387512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1387598-1387651:1:exon

position:1387598:1
position: 1387598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387651:1
position: 1387651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1389239-1389280:1:exon

position:1389239:1
position: 1389239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389280:1
position: 1389280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1390147-1390231:1:exon

position:1390147:1
position: 1390147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390231:1
position: 1390231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1390383-1390418:1:exon

position:1390383:1
position: 1390383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390418:1
position: 1390418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1392282-1392446:1:exon

position:1392282:1
position: 1392282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392446:1
position: 1392446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1394922-1395017:1:exon

position:1394922:1
position: 1394922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1395017:1
position: 1395017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1396366-1396449:1:exon

position:1396366:1
position: 1396366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1396449:1
position: 1396449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1397001-1397071:1:exon

position:1397001:1
position: 1397001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1397071:1
position: 1397071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1401442-1401633:1:exon

position:1401442:1
position: 1401442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401633:1
position: 1401633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1402180-1402347:1:exon

position:1402180:1
position: 1402180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1402347:1
position: 1402347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1405115-1405207:1:exon

position:1405115:1
position: 1405115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405207:1
position: 1405207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1405296-1405400:1:exon

position:1405296:1
position: 1405296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405400:1
position: 1405400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1405976-1406073:1:exon

position:1405976:1
position: 1405976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1406073:1
position: 1406073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1406563-1406713:1:exon

position:1406563:1
position: 1406563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1406713:1
position: 1406713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1406903-1407016:1:exon

position:1406903:1
position: 1406903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1407016:1
position: 1407016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1407848-1408015:1:exon

position:1407848:1
position: 1407848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408015:1
position: 1408015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1408131-1408220:1:exon

position:1408131:1
position: 1408131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408220:1
position: 1408220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1409027-1409179:1:exon

position:1409027:1
position: 1409027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1409179:1
position: 1409179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1409327-1409425:1:exon

position:1409327:1
position: 1409327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1409425:1
position: 1409425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1409537-1409626:1:exon

position:1409537:1
position: 1409537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1409626:1
position: 1409626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1410608-1410747:1:exon

position:1410608:1
position: 1410608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1410747:1
position: 1410747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1411486-1411612:1:exon

position:1411486:1
position: 1411486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1411612:1
position: 1411612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1411706-1411786:1:exon

position:1411706:1
position: 1411706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1411786:1
position: 1411786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1412195-1412293:1:exon

position:1412195:1
position: 1412195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412293:1
position: 1412293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1413479-1413529:1:exon

position:1413479:1
position: 1413479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1413529:1
position: 1413529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1414678-1414863:1:exon

position:1414678:1
position: 1414678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414863:1
position: 1414863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1415441-1415574:1:exon

position:1415441:1
position: 1415441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1415574:1
position: 1415574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1417023-1417095:1:exon

position:1417023:1
position: 1417023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1417095:1
position: 1417095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1417962-1418033:1:exon

position:1417962:1
position: 1417962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1418033:1
position: 1418033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1419299-1419427:1:exon

position:1419299:1
position: 1419299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419427:1
position: 1419427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1420776-1420874:1:exon

position:1420776:1
position: 1420776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1420874:1
position: 1420874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1421764-1421976:1:exon

position:1421764:1
position: 1421764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421976:1
position: 1421976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1423758-1423935:1:exon

position:1423758:1
position: 1423758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423935:1
position: 1423935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1427259-1427373:1:exon

position:1427259:1
position: 1427259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427373:1
position: 1427373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:1428327-1428499:1:exon

position:1428327:1
position: 1428327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428499:1
position: 1428499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1430640-1432028:1:exon

position:1430640:1
position: 1430640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COL4A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: COL4A1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: collagen alpha-1(IV) chain
translation: MGPRLGAWLLLGLAALLLHEESSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVIGFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPSGVPGYPGNPGLPGIPGQDGPPGPPGIPGCNGTKGERGPAGPPGLPGFAGNPGPPGLPGMKGDPGEILGHIPGTLLKGERGYPGQPGAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGEKGDQGVSGPPGLPGQAQVITKGDTAMRGEKGQKGEPGFPGLQGFGEKGEPGKPGPRGKPGKDGEKGEKGSQGFPGDSGYPGQPGREGLKGEKGEAGPPGLPGTVIGTGPLGEKGEPGYPGGPGAKGETGPKGYPGIPGQPGPPGFPTPGLIGAPGFPGDRGEKGEPGLPGVSLPGPSGRDGLPGPPGPPGPPGQPGHTNGLVECQPGPPGDQGPPGIPGQPGLTGEVGEKGQKGDSCLVCDTTELRGPPGPQGPPGEIGFPGQPGAKGDRGLPGRAGVEGTPGPQGVPGLMGQPGAKGEPGEIYFDIRLKGDKGDPGLPGQPGMPGRAGSPGRDGQPGLPGPRGSPGSVGLKGERGPPGGVGFPGSRGDXGPPGPPGFGPIGPIGDKGEMGFPGNPGAPGQPGLKGETGKVVPLPGPPGAEGLPGSPGFQGPQGDRGFPGSPGRPGLPGEKGAIGQPGIGFPGPPGPKGVDGIPGDAGPPGNPGRQGFNGLPGNPGPPGQKGEPGVGLPGLKGLPGIPGIPGTPGEKGNVGGPGVPGEHGAIGPPGLQGLRGDPGPPGLQGPRGAPGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGSPGQPGIPGPKGEMGVMGTPGQPGSPGPAGVPGLPGAKGEHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGEKGDQGEKGQTGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGVSGIPGAPGLPGPKGSTGGMGLPGMPGPKGVAGIPGPQGIPGLPGDKGAKGEKGQAGLPGIGIPGRPGEKGDQGLAGFPGSPGEKGEKGSTGIPGMPGAPGPKGSPGSVGYPGSPGLPGEKGDKGLPGLDGTPGIKGEAGLPGKPGPTGPAGQKGEPGSDGIPGSVGEKGEAGLPGRGFPGFPGSKGEKGSKGDVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGTPGHAVEGPKGDRGPQGQPGLPGHPGPMGPPGLPGLDGLKGDKGNPGWPGTPGAPGPKGDPGFQGMPGIGGSPGITGAKGDMGPPGVPGFHGQKGAPGLQGVKGDQGDQGFPGTKGLPGPPGPPGPFNIIKGEPGLPGPEGPAGLKGLQGPPGPKGQQGVTGSAGLPGPPGEPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTPSVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGENIRPFISRCAVCEAPAMVMAVHSQTIQIPQCPAGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCLRRT
SIO_010081: COL4A1
subclass of: SO_0000673
so part of: COL4A1
location: join(1302247..1302330,1354113..1354172,1378338..1378427,1378524..1378568,1379654..1379698,1379803..1379865,1380356..1380409,1380553..1380579,1382391..1382474,1382559..1382621,1383930..1383965,1384492..1384533,1385725..1385811,1386257..1386283,1386451..1386501,1387468..1387512,1387598..1387651,1389239..1389280,1390147..1390231,1390383..1390418,1392282..1392446,1394922..1395017,1396366..1396449,1397001..1397071,1401442..1401633,1402180..1402347,1405115..1405207,1405296..1405400,1405976..1406073,1406563..1406713,1406903..1407016,1407848..1408015,1408131..1408220,1409027..1409179,1409327..1409425,1409537..1409626,1410608..1410747,1411486..1411612,1411706..1411786,1412195..1412293,1413479..1413529,1414678..1414863,1415441..1415574,1417023..1417095,1417962..1418033,1419299..1419427,1420776..1420874,1421764..1421976,1423758..1423935,1427259..1427373,1428327..1428499,1430640..1430721)
location: region:1302247-1430721:1
so has part: feature:1302247-1302330:1:exon
so has part: feature:1354113-1354172:1:exon
so has part: feature:1378338-1378427:1:exon
so has part: feature:1378524-1378568:1:exon
so has part: feature:1379654-1379698:1:exon
so has part: feature:1379803-1379865:1:exon
so has part: feature:1380356-1380409:1:exon
so has part: feature:1380553-1380579:1:exon
so has part: feature:1382391-1382474:1:exon
so has part: feature:1382559-1382621:1:exon
so has part: feature:1383930-1383965:1:exon
so has part: feature:1384492-1384533:1:exon
so has part: feature:1385725-1385811:1:exon
so has part: feature:1386257-1386283:1:exon
so has part: feature:1386451-1386501:1:exon
so has part: feature:1387468-1387512:1:exon
so has part: feature:1387598-1387651:1:exon
so has part: feature:1389239-1389280:1:exon
so has part: feature:1390147-1390231:1:exon
so has part: feature:1390383-1390418:1:exon
so has part: feature:1392282-1392446:1:exon
so has part: feature:1394922-1395017:1:exon
so has part: feature:1396366-1396449:1:exon
so has part: feature:1397001-1397071:1:exon
so has part: feature:1401442-1401633:1:exon
so has part: feature:1402180-1402347:1:exon
so has part: feature:1405115-1405207:1:exon
so has part: feature:1405296-1405400:1:exon
so has part: feature:1405976-1406073:1:exon
so has part: feature:1406563-1406713:1:exon
so has part: feature:1406903-1407016:1:exon
so has part: feature:1407848-1408015:1:exon
so has part: feature:1408131-1408220:1:exon
so has part: feature:1409027-1409179:1:exon
so has part: feature:1409327-1409425:1:exon
so has part: feature:1409537-1409626:1:exon
so has part: feature:1410608-1410747:1:exon
so has part: feature:1411486-1411612:1:exon
so has part: feature:1411706-1411786:1:exon
so has part: feature:1412195-1412293:1:exon
so has part: feature:1413479-1413529:1:exon
so has part: feature:1414678-1414863:1:exon
so has part: feature:1415441-1415574:1:exon
so has part: feature:1417023-1417095:1:exon
so has part: feature:1417962-1418033:1:exon
so has part: feature:1419299-1419427:1:exon
so has part: feature:1420776-1420874:1:exon
so has part: feature:1421764-1421976:1:exon
so has part: feature:1423758-1423935:1:exon
so has part: feature:1427259-1427373:1:exon
so has part: feature:1428327-1428499:1:exon
so has part: feature:1430640-1430721:1:exon

XP_017911853.1
type: Protein
SIO_000068: ncbiprotein

position:1302247:1
position: 1302247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430721:1
position: 1430721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1302247-1302330:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1354113-1354172:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1378338-1378427:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1378524-1378568:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1379654-1379698:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1379803-1379865:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1380356-1380409:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1380553-1380579:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1382391-1382474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1382559-1382621:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1383930-1383965:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1384492-1384533:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1385725-1385811:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1386257-1386283:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1386451-1386501:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1387468-1387512:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1387598-1387651:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1389239-1389280:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1390147-1390231:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1390383-1390418:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1392282-1392446:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1394922-1395017:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1396366-1396449:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1397001-1397071:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1401442-1401633:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1402180-1402347:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1405115-1405207:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1405296-1405400:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1405976-1406073:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1406563-1406713:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1406903-1407016:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1407848-1408015:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1408131-1408220:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1409027-1409179:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1409327-1409425:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1409537-1409626:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1410608-1410747:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1411486-1411612:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1411706-1411786:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1412195-1412293:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1413479-1413529:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1414678-1414863:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1415441-1415574:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1417023-1417095:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1417962-1418033:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1419299-1419427:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1420776-1420874:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1421764-1421976:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1423758-1423935:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1427259-1427373:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1428327-1428499:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1430640-1430721:1:exon

IRS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: IRS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1636947..1667327
location: region:1636947-1667327:1
so has part: feature:1636947-1667327:1:exon
subclass of: SO_0000010

108637286
type: Gene
SIO_000068: ncbigene

position:1636947:1
position: 1636947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1667327:1
position: 1667327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1636947-1667327:1:exon

IRS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: IRS2
product: insulin receptor substrate 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_018056365.1
SIO_010081: IRS2
subclass of: SO_0000673
so part of: IRS2
location: join(1636947..1640979,1664920..1667327)
location: region:1636947-1667327:1
so has part: feature:1636947-1640979:1:exon
so has part: feature:1664920-1667327:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1636947-1640979:1:exon

position:1640979:1
position: 1640979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1664920-1667327:1:exon

position:1664920:1
position: 1664920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IRS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: IRS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin receptor substrate 2
translation: MASPPEHGPPGPAGGDGPNLNNNNNNNNHSVRKCGYLRKQKHGHKRFFVLRGPGAGGDEAGAGGGPAPQPPRLEYYESEKKWRSKAGAPKRVIALDCCLNINKRADAKHKYLIALYTKDEYFAVAAENEQEQEGWYRALTDLVSEGRAGAGDAPPAAAATSGSCSASLPGALGGSAGAAAADDSYGLVAPATAAYREVWQVNLKPKGLGQSKNLTGVYRLCLSARTIGFVKLNCEQPSVTLQLMSIRRCGHSDSFFFIEVGRSAVTGPGELWMQADDSVVAQNIHETILEAMKALKELFEFRPRSKSQSSGSSATHPISVPGARRHHHLVNLPPSQTGLVRRSRTDSLAATPPAAKCSACRVRTASEGDGGAAAGAGAGAGAGAAAGSPLSPGPVRAPLSRSHTLSGGRAGKTALAPAGGGLQHSRSMSMPVAHSPPAATSPGSLSSSSGHGSGSYPPPPGPHPHLQHPLHPQRPSSGSASASGSPSDPGFMSLDEYGSSPGDLRVYCGHRSNTPESIAETPPARDGSAGELYGYMTMERPLSHCGGRAYRRVSGDGAPDLDRGLRKRTYSLTTPARQRPAPQPSSASLDEYTLMRATFSGSSGRLCPSCPASSPKVAYHPYPEDYGDIEIGSHRSSSSNLGTDDGYVPMTPGVALLGTGSGSCKGDDYMPMSPTSVSAPKQILQPRAAPAALPPAGAAVPTPASAAGRAFPGTAGGYKTGSPAESSPEDSGYMRMWCGSKLSMESADGKLLPNGDYLNMSPSDAGTTGTPPDFFSAAGETPRGMPGYCYSSLPRSYKAPHACHGDSDQYVLMSSPVGRVLEEEQLEPAPGPAQPASAFPAAAAGSGHPPPPHPAVPSPGRLGGGGGSRPDGFLAQRCRAVRPTRLSLEGLPALPRMHEYPLPPEPRSPGEYINIDFGEAGARLSPPAPPLLASAASSSSLLSASSPASSLGSGTPGTSGDSRQRSPLSDYMNLDFSSPKSPQPGAQGRDPVGSLDALLSPEASVYPPLPPRPAAPSSALQPPPPPPPPGELYRLPAAPASKGPGAASSLSSDTGDNGDYTEMAFGVAATPPQPIVAPPKPDGARVSSPVSGLKRLSLMDQVSGVEAFLQAGQPPDPHRGAKVIRADPQGGRRRHSSETFSSTTTVTPVSPSFAHTPKRHNSASVENVSLRKGSEGGGGGGSSGILGGCDEPPSSPRQLPPPTPQQARAWTPAQPGGGLVGCPGGTSSPMRRETSTGFQNGLNYIAIDVRDEPGLSPPLQQHPHAQTGDRSAWGRTRSLGGLISAVGAGSPAAVCGGPGPGALPAANAYASIDFLTHHLKEATVVKE
SIO_010081: IRS2
subclass of: SO_0000673
so part of: IRS2
location: join(1637001..1640979,1664920..1664924)
location: region:1637001-1664924:1
so has part: feature:1637001-1640979:1:exon
so has part: feature:1664920-1664924:1:exon

XP_017911854.1
type: Protein
SIO_000068: ncbiprotein

position:1637001:1
position: 1637001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1664924:1
position: 1664924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1637001-1640979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1664920-1664924:1:exon

MYO16
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: MYO16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1985596..2514686)
location: region:1985596-2514686:-1
so has part: feature:1985596-2514686:-1:exon
subclass of: SO_0000010

102170796
type: Gene
SIO_000068: ncbigene

position:1985596:-1
position: 1985596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2514686:-1
position: 2514686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1985596-2514686:-1:exon

MYO16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: MYO16
product: myosin XVI
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018056366.1
SIO_010081: MYO16
subclass of: SO_0000673
so part of: MYO16
location: complement(join(1985596..1986307,2006781..2006866,2017475..2017633,2044052..2045075,2057570..2057838,2060536..2060782,2065582..2065678,2087162..2087264,2123449..2123654,2123916..2123996,2126301..2126476,2131658..2131733,2145969..2146169,2148150..2148302,2165267..2165339,2184367..2184508,2185676..2185747,2186520..2186637,2189281..2189392,2227798..2227945,2236838..2236955,2243477..2243582,2245619..2245746,2247523..2247588,2251532..2251642,2258518..2258668,2277169..2277322,2279960..2280035,2291764..2291889,2303629..2303753,2312428..2312536,2337898..2338041,2345341..2345411,2378179..2378442,2514561..2514686))
location: region:1985596-2514686:-1
so has part: feature:2514561-2514686:-1:exon
so has part: feature:2378179-2378442:-1:exon
so has part: feature:2345341-2345411:-1:exon
so has part: feature:2337898-2338041:-1:exon
so has part: feature:2312428-2312536:-1:exon
so has part: feature:2303629-2303753:-1:exon
so has part: feature:2291764-2291889:-1:exon
so has part: feature:2279960-2280035:-1:exon
so has part: feature:2277169-2277322:-1:exon
so has part: feature:2258518-2258668:-1:exon
so has part: feature:2251532-2251642:-1:exon
so has part: feature:2247523-2247588:-1:exon
so has part: feature:2245619-2245746:-1:exon
so has part: feature:2243477-2243582:-1:exon
so has part: feature:2236838-2236955:-1:exon
so has part: feature:2227798-2227945:-1:exon
so has part: feature:2189281-2189392:-1:exon
so has part: feature:2186520-2186637:-1:exon
so has part: feature:2185676-2185747:-1:exon
so has part: feature:2184367-2184508:-1:exon
so has part: feature:2165267-2165339:-1:exon
so has part: feature:2148150-2148302:-1:exon
so has part: feature:2145969-2146169:-1:exon
so has part: feature:2131658-2131733:-1:exon
so has part: feature:2126301-2126476:-1:exon
so has part: feature:2123916-2123996:-1:exon
so has part: feature:2123449-2123654:-1:exon
so has part: feature:2087162-2087264:-1:exon
so has part: feature:2065582-2065678:-1:exon
so has part: feature:2060536-2060782:-1:exon
so has part: feature:2057570-2057838:-1:exon
so has part: feature:2044052-2045075:-1:exon
so has part: feature:2017475-2017633:-1:exon
so has part: feature:2006781-2006866:-1:exon
so has part: feature:1985596-1986307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2514561-2514686:-1:exon

position:2514561:-1
position: 2514561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2378179-2378442:-1:exon

position:2378179:-1
position: 2378179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2378442:-1
position: 2378442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2345341-2345411:-1:exon

position:2345341:-1
position: 2345341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2345411:-1
position: 2345411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2337898-2338041:-1:exon

position:2337898:-1
position: 2337898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2338041:-1
position: 2338041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2312428-2312536:-1:exon

position:2312428:-1
position: 2312428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2312536:-1
position: 2312536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2303629-2303753:-1:exon

position:2303629:-1
position: 2303629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2303753:-1
position: 2303753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2291764-2291889:-1:exon

position:2291764:-1
position: 2291764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2291889:-1
position: 2291889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2279960-2280035:-1:exon

position:2279960:-1
position: 2279960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2280035:-1
position: 2280035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2277169-2277322:-1:exon

position:2277169:-1
position: 2277169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2277322:-1
position: 2277322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2258518-2258668:-1:exon

position:2258518:-1
position: 2258518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2258668:-1
position: 2258668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2251532-2251642:-1:exon

position:2251532:-1
position: 2251532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2251642:-1
position: 2251642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2247523-2247588:-1:exon

position:2247523:-1
position: 2247523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2247588:-1
position: 2247588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2245619-2245746:-1:exon

position:2245619:-1
position: 2245619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2245746:-1
position: 2245746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2243477-2243582:-1:exon

position:2243477:-1
position: 2243477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2243582:-1
position: 2243582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2236838-2236955:-1:exon

position:2236838:-1
position: 2236838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2236955:-1
position: 2236955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2227798-2227945:-1:exon

position:2227798:-1
position: 2227798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2227945:-1
position: 2227945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2189281-2189392:-1:exon

position:2189281:-1
position: 2189281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2189392:-1
position: 2189392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2186520-2186637:-1:exon

position:2186520:-1
position: 2186520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2186637:-1
position: 2186637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2185676-2185747:-1:exon

position:2185676:-1
position: 2185676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2185747:-1
position: 2185747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2184367-2184508:-1:exon

position:2184367:-1
position: 2184367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2184508:-1
position: 2184508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2165267-2165339:-1:exon

position:2165267:-1
position: 2165267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2165339:-1
position: 2165339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2148150-2148302:-1:exon

position:2148150:-1
position: 2148150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2148302:-1
position: 2148302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2145969-2146169:-1:exon

position:2145969:-1
position: 2145969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2146169:-1
position: 2146169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2131658-2131733:-1:exon

position:2131658:-1
position: 2131658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2131733:-1
position: 2131733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2126301-2126476:-1:exon

position:2126301:-1
position: 2126301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2126476:-1
position: 2126476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2123916-2123996:-1:exon

position:2123916:-1
position: 2123916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2123996:-1
position: 2123996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2123449-2123654:-1:exon

position:2123449:-1
position: 2123449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2123654:-1
position: 2123654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2087162-2087264:-1:exon

position:2087162:-1
position: 2087162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2087264:-1
position: 2087264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2065582-2065678:-1:exon

position:2065582:-1
position: 2065582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2065678:-1
position: 2065678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2060536-2060782:-1:exon

position:2060536:-1
position: 2060536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2060782:-1
position: 2060782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2057570-2057838:-1:exon

position:2057570:-1
position: 2057570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2057838:-1
position: 2057838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2044052-2045075:-1:exon

position:2044052:-1
position: 2044052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2045075:-1
position: 2045075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2017475-2017633:-1:exon

position:2017475:-1
position: 2017475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2017633:-1
position: 2017633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2006781-2006866:-1:exon

position:2006781:-1
position: 2006781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2006866:-1
position: 2006866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1985596-1986307:-1:exon

position:1986307:-1
position: 1986307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MYO16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: MYO16
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: unconventional myosin-XVI
translation: MEIDQCLLESLPLGQRQRLVKRMRCEQVKAYYEREKAFQKQEGLLKKLKHGKKQKVHFNLADMIQDAIIHHDDKEALRLLKEGADPHMPVSSGGSLLHLCARYDNVFIAEILIDRGADVNHQDEDFWTPMHIACACDNPDVVLLLILAGANVLLQDVNGNIPLDYATEGTDSSSILLTYLDENGVDLTSLRQMKLQRPVSMLTDVKHFLSCGGNVNEKNDDGVTLLHMACASGYKEVVSLLLEHGGDLNAADDQDWTPLHLAAKYGQANLVKLLLMHQANPHLLNCHEEKASDVAASELIEEMLLKAESAWEGKMQASLCVQTLAQEDPYEEIVPDLPVLSSKLSPLVLPIAKQDSLLEKDIMFRDATKGLCKRQSQDSTAENAPMHGPSKPEQVKLMPPAPNDDLATLSELTDSSLLYEIQKRFGNNQIYTFIGDILLLVNPFKEIPIYSTVVSELYLSSTGQPNPSLPPHIFSCAERAFHQLFQERRPQCFILSGERGSGKSEASKQITRHLTCRSGSSRPIFDSKFKHAMSILEAFGHARTTLNDLSSCFIKYFELQFCERKKHLTGARIFTYMLEKSRLVSQPPGQSNFLIFYLLMDGLSAEEKYGLHLNNLHAHRYLHQTLREDRSTAERSLNREKFAVLKQALNVIGFSNLEVENLYVILAAVLHLGDVGFTAVSEADPALVSDLQLLEQVAGMLQVSPDELASALTTDIQYFKGEVITRRHTVVMAEFHRDLLAKSLYSRLFSFLVNTVNCCLRGDEEPGSSQTWGVGILDIFGFEEFQKNEFEQLCVNMTNEKMHQYINEVLFLQEQAECVQEGVTMETAYSLGNQTGVLDFFFQKPSGFLSLLDEESQMIWSVEPSLPKKLHGLLESSNTNAVYSPVKDGNGNLALREQGTAFTVMHYAGRVMYEAVGAIEKNKDSLSQNLLFVMKTSENVVINHLFQSKLSQTGALVSSSPSFKFRGHKSARLSKKMTASSMMGENRNYLELSKLLKKKGNSTFLQRLDRGGPATIASQLRKTLTDITGKLQKCTPHFIHCIKPNNSKLPDTFDNFYVSAQLQYVGILEMVKSVRHGYPVRLSFCDFLSRYRPLAETLPGNERTLPAEERCRLALKHCPLPGWQIGVRKVFLKYWHASHLNDLCRQLQRKIITCQKVVRGFLARQHLHQKRSARQQEVTSINSFLQVTEDLGLKTYDALVVQNASDIARENDRLRNEMNAAFHKEKLEARGKQEEGSRRAEDKSGPRRLHGSSVPVPAAVDGLAQLAGPPSRPPSLHSVFSLDDGSGLPSPRKQPPPKPKRDPATRLSASYEAVSACLWAAARDSANEALTRPRPHSDDYSTMKKVPPRKPKRSPHTKLSGSSEEISGARPGAAGPGGARRRAGGPQRLPGVPAPPAPPAPPEPEPEPVYIEMLGRAGSPEPAEAVYEEMKYWAPPGGAGGRGAGAGSVSAAAPEEGGAGGDSSGIPAPFPNLLAHRPPLLVFPPTPATCSPASDESPLTPLEVKQLPVLETNLKYPVQPEGSSPLSPQHPKTPKGDGDRPASPGVPALAGLHGGSPPPTPPPAPPPPRGPXAHFPFAAPAEPPRVPPKSASAPAGAPCSPLPKTPYSPGKTARGEPRKATTTGAPSPAPYSPPNSRALGSPLDELASLFNSGRSVLRRSAVGRRIREPQGFETNMNLTSRDDFGTSEITSETQDRNANNHGIQFSNSLSSAMTAENGNSVSNGLPEEDGFSRLSGGGASSFQRHRESHTTQVIHQLRLSENESVALRELLDWRRRLCEERADWPRILPPREPRAPPPPPCRKPEGAPCRRLPPEFWDSTL
SIO_010081: MYO16
subclass of: SO_0000673
so part of: MYO16
location: complement(join(1986098..1986307,2006781..2006866,2017475..2017633,2044052..2045075,2057570..2057838,2060536..2060782,2065582..2065678,2087162..2087264,2123449..2123654,2123916..2123996,2126301..2126476,2131658..2131733,2145969..2146169,2148150..2148302,2165267..2165339,2184367..2184508,2185676..2185747,2186520..2186637,2189281..2189392,2227798..2227945,2236838..2236955,2243477..2243582,2245619..2245746,2247523..2247588,2251532..2251642,2258518..2258668,2277169..2277322,2279960..2280035,2291764..2291889,2303629..2303753,2312428..2312536,2337898..2338041,2345341..2345411,2378179..2378404))
location: region:1986098-2378404:-1
so has part: feature:2378179-2378404:-1:exon
so has part: feature:2345341-2345411:-1:exon
so has part: feature:2337898-2338041:-1:exon
so has part: feature:2312428-2312536:-1:exon
so has part: feature:2303629-2303753:-1:exon
so has part: feature:2291764-2291889:-1:exon
so has part: feature:2279960-2280035:-1:exon
so has part: feature:2277169-2277322:-1:exon
so has part: feature:2258518-2258668:-1:exon
so has part: feature:2251532-2251642:-1:exon
so has part: feature:2247523-2247588:-1:exon
so has part: feature:2245619-2245746:-1:exon
so has part: feature:2243477-2243582:-1:exon
so has part: feature:2236838-2236955:-1:exon
so has part: feature:2227798-2227945:-1:exon
so has part: feature:2189281-2189392:-1:exon
so has part: feature:2186520-2186637:-1:exon
so has part: feature:2185676-2185747:-1:exon
so has part: feature:2184367-2184508:-1:exon
so has part: feature:2165267-2165339:-1:exon
so has part: feature:2148150-2148302:-1:exon
so has part: feature:2145969-2146169:-1:exon
so has part: feature:2131658-2131733:-1:exon
so has part: feature:2126301-2126476:-1:exon
so has part: feature:2123916-2123996:-1:exon
so has part: feature:2123449-2123654:-1:exon
so has part: feature:2087162-2087264:-1:exon
so has part: feature:2065582-2065678:-1:exon
so has part: feature:2060536-2060782:-1:exon
so has part: feature:2057570-2057838:-1:exon
so has part: feature:2044052-2045075:-1:exon
so has part: feature:2017475-2017633:-1:exon
so has part: feature:2006781-2006866:-1:exon
so has part: feature:1986098-1986307:-1:exon

XP_017911855.1
type: Protein
SIO_000068: ncbiprotein

position:1986098:-1
position: 1986098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2378404:-1
position: 2378404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2378179-2378404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2345341-2345411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2337898-2338041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2312428-2312536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2303629-2303753:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2291764-2291889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2279960-2280035:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2277169-2277322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2258518-2258668:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2251532-2251642:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2247523-2247588:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2245619-2245746:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2243477-2243582:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2236838-2236955:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2227798-2227945:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2189281-2189392:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2186520-2186637:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2185676-2185747:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2184367-2184508:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2165267-2165339:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2148150-2148302:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2145969-2146169:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2131658-2131733:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2126301-2126476:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2123916-2123996:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2123449-2123654:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2087162-2087264:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2065582-2065678:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2060536-2060782:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2057570-2057838:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2044052-2045075:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2017475-2017633:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2006781-2006866:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1986098-1986307:-1:exon

TRNAY-GUA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAY-GUA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2046103..2046174)
location: region:2046103-2046174:-1
so has part: feature:2046103-2046174:-1:exon
subclass of: SO_0000663

108637330
type: Gene
SIO_000068: ncbigene

position:2046103:-1
position: 2046103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2046174:-1
position: 2046174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2046103-2046174:-1:exon

TRNAY-GUA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAY-GUA
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2046139..2046141),aa:Tyr, seq:gta)
SIO_010081: TRNAY-GUA
subclass of: SO_0000673
so part of: TRNAY-GUA
location: complement(2046103..2046174)
location: region:2046103-2046174:-1
so has part: feature:2046103-2046174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2046103-2046174:-1:exon

TNFSF13B
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TNFSF13B
note: tumor necrosis factor superfamily member 13b; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(2621246..2652506)
location: region:2621246-2652506:-1
so has part: feature:2621246-2652506:-1:exon
subclass of: SO_0000010

100860848
type: Gene
SIO_000068: ncbigene

position:2621246:-1
position: 2621246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2652506:-1
position: 2652506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2621246-2652506:-1:exon

TNFSF13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TNFSF13B
product: tumor necrosis factor superfamily member 13b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 12 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_018056283.1
SIO_010081: TNFSF13B
subclass of: SO_0000673
so part of: TNFSF13B
location: complement(join(2621246..2623130,2626294..2626444,2626531..2626643,2634556..2634612,2651781..2651868,2651964..2652506))
location: region:2621246-2652506:-1
so has part: feature:2651964-2652506:-1:exon
so has part: feature:2651781-2651868:-1:exon
so has part: feature:2634556-2634612:-1:exon
so has part: feature:2626531-2626643:-1:exon
so has part: feature:2626294-2626444:-1:exon
so has part: feature:2621246-2623130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2651964-2652506:-1:exon

position:2651964:-1
position: 2651964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2651781-2651868:-1:exon

position:2651781:-1
position: 2651781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2651868:-1
position: 2651868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2634556-2634612:-1:exon

position:2634556:-1
position: 2634556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2634612:-1
position: 2634612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2626531-2626643:-1:exon

position:2626531:-1
position: 2626531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2626643:-1
position: 2626643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2626294-2626444:-1:exon

position:2626294:-1
position: 2626294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2626444:-1
position: 2626444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2621246-2623130:-1:exon

position:2623130:-1
position: 2623130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNFSF13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TNFSF13B
product: tumor necrosis factor superfamily member 13b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018056284.1
SIO_010081: TNFSF13B
subclass of: SO_0000673
so part of: TNFSF13B
location: complement(join(2621246..2623130,2626531..2626643,2634556..2634612,2651781..2651871,2651964..2652506))
location: region:2621246-2652506:-1
so has part: feature:2651964-2652506:-1:exon
so has part: feature:2651781-2651871:-1:exon
so has part: feature:2634556-2634612:-1:exon
so has part: feature:2626531-2626643:-1:exon
so has part: feature:2621246-2623130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2651964-2652506:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2651781-2651871:-1:exon

position:2651871:-1
position: 2651871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2634556-2634612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2626531-2626643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2621246-2623130:-1:exon

TNFSF13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TNFSF13B
product: tumor necrosis factor superfamily member 13b
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001285702.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 6 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001285702.1
SIO_010081: TNFSF13B
subclass of: SO_0000673
so part of: TNFSF13B
location: complement(join(2622897..2623130,2626294..2626444,2626531..2626643,2634556..2634612,2651781..2651871,2651964..2652304))
location: region:2622897-2652304:-1
so has part: feature:2651964-2652304:-1:exon
so has part: feature:2651781-2651871:-1:exon
so has part: feature:2634556-2634612:-1:exon
so has part: feature:2626531-2626643:-1:exon
so has part: feature:2626294-2626444:-1:exon
so has part: feature:2622897-2623130:-1:exon

position:2622897:-1
position: 2622897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2652304:-1
position: 2652304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2651964-2652304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2651781-2651871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2634556-2634612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2626531-2626643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2626294-2626444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2622897-2623130:-1:exon

TNFSF13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TNFSF13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor ligand superfamily member 13B isoform X1
translation: MDDSTGEQSRLSCPQTREEMKLKEGGSVLPQEESPSGRCSKDGKLLAVTLLLAASSSCLTVLAFCWVASLQAELGSLRAELRGRPGAPQAGAAAPREAPGVTPALKRIFAPPAPGESNSSQSGRSKRALQEAEETVTQDCLQLIADSDTPTIRKGAYTFVPWLLSFKRGRALEEKENKILVKETGYFFIYGQVLYTDNTFAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPREDAKISRDGDGTFFGALKLL
SIO_010081: TNFSF13B
subclass of: SO_0000673
so part of: TNFSF13B
location: complement(join(2623018..2623130,2626294..2626444,2626531..2626643,2634556..2634612,2651781..2651868,2651964..2652281))
location: region:2623018-2652281:-1
so has part: feature:2651964-2652281:-1:exon
so has part: feature:2651781-2651868:-1:exon
so has part: feature:2634556-2634612:-1:exon
so has part: feature:2626531-2626643:-1:exon
so has part: feature:2626294-2626444:-1:exon
so has part: feature:2623018-2623130:-1:exon

XP_017911772.1
type: Protein
SIO_000068: ncbiprotein

position:2623018:-1
position: 2623018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2652281:-1
position: 2652281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2651964-2652281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2651781-2651868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2634556-2634612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2626531-2626643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2626294-2626444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2623018-2623130:-1:exon

TNFSF13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TNFSF13B
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: tumor necrosis factor ligand superfamily member 13B
translation: MDDSTGEQSRLSCPQTREEMKLKEGGSVLPQEESPSGRCSKDGKLLAVTLLLAASSSCLTVLAFCWVASLQAELGSLRAELRGRPGAPQAGAAAPREAPGVTPALKQRIFAPPAPGESNSSQSGRSKRALQEAEETVTQDCLQLIADSDTPTIRKGAYTFVPWLLSFKRGRALEEKENKILVKETGYFFIYGQVLYTDNTFAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQLAIPREDAKISRDGDGTFFGALKLL
SIO_010081: TNFSF13B
subclass of: SO_0000673
so part of: TNFSF13B
location: complement(join(2623018..2623130,2626294..2626444,2626531..2626643,2634556..2634612,2651781..2651871,2651964..2652281))
location: region:2623018-2652281:-1
so has part: feature:2651964-2652281:-1:exon
so has part: feature:2651781-2651871:-1:exon
so has part: feature:2634556-2634612:-1:exon
so has part: feature:2626531-2626643:-1:exon
so has part: feature:2626294-2626444:-1:exon
so has part: feature:2623018-2623130:-1:exon

NP_001272631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2651964-2652281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2651781-2651871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2634556-2634612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2626531-2626643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2626294-2626444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2623018-2623130:-1:exon

TNFSF13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TNFSF13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor ligand superfamily member 13B isoform X2
translation: MDDSTGEQSRLSCPQTREEMKLKEGGSVLPQEESPSGRCSKDGKLLAVTLLLAASSSCLTVLAFCWVASLQAELGSLRAELRGRPGAPQAGAAAPREAPGVTPALKQRIFAPPAPGESNSSQSGRSKRALQEAEETVTQDCLQLIADSDTPTIRKGAYTFVPWLLSFKRGRALEEKENKILVKETGYFFIYGQASRSWRKETNSNWQYPGRTLRYREMETARFSEP
SIO_010081: TNFSF13B
subclass of: SO_0000673
so part of: TNFSF13B
location: complement(join(2623029..2623130,2626531..2626643,2634556..2634612,2651781..2651871,2651964..2652281))
location: region:2623029-2652281:-1
so has part: feature:2651964-2652281:-1:exon
so has part: feature:2651781-2651871:-1:exon
so has part: feature:2634556-2634612:-1:exon
so has part: feature:2626531-2626643:-1:exon
so has part: feature:2623029-2623130:-1:exon

XP_017911773.1
type: Protein
SIO_000068: ncbiprotein

position:2623029:-1
position: 2623029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2651964-2652281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2651781-2651871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2634556-2634612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2626531-2626643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2623029-2623130:-1:exon

ABHD13
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ABHD13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2670228..2690103)
location: region:2670228-2690103:-1
so has part: feature:2670228-2690103:-1:exon
subclass of: SO_0000010

102183248
type: Gene
SIO_000068: ncbigene

position:2670228:-1
position: 2670228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2690103:-1
position: 2690103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2670228-2690103:-1:exon

ABHD13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ABHD13
product: abhydrolase domain containing 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 26 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_013968392.2
SIO_010081: ABHD13
subclass of: SO_0000673
so part of: ABHD13
location: complement(join(2670228..2675211,2689870..2690103))
location: region:2670228-2690103:-1
so has part: feature:2689870-2690103:-1:exon
so has part: feature:2670228-2675211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2689870-2690103:-1:exon

position:2689870:-1
position: 2689870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2670228-2675211:-1:exon

position:2675211:-1
position: 2675211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABHD13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ABHD13
product: abhydrolase domain containing 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 30 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_018056367.1
SIO_010081: ABHD13
subclass of: SO_0000673
so part of: ABHD13
location: complement(join(2670228..2675211,2687581..2687823))
location: region:2670228-2687823:-1
so has part: feature:2687581-2687823:-1:exon
so has part: feature:2670228-2675211:-1:exon

position:2687823:-1
position: 2687823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2687581-2687823:-1:exon

position:2687581:-1
position: 2687581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2670228-2675211:-1:exon

ABHD13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ABHD13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ABHD13
translation: MEKSWVLWNFVERWLVALASWSWALCRISLLSLIVTFHLYGGIVLLLLIFISIAGILYKFQDVLLYFPEQPSSSRLYVPMPTGIPHENIFIRTKDGVRLNLILIRYTGDSSPYSPTIIYFHGNAGNIGHRLPNALLMLVNLKVNLLLVDYRGYGKSEGEASEEGLYLDSEAVLDYVMSRPDLDKTKVFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPMRYLPLWCYKNKFLSYRKISQCRMPSLFISGLSDQLIPPVMMKQLYELSPSRTKRLAIFPDGTHNDTWQCQGYFTALEQFIKEVIKSPSPEEMAKTSSNVTII
SIO_010081: ABHD13
subclass of: SO_0000673
so part of: ABHD13
location: complement(2674178..2675191)
location: region:2674178-2675191:-1
so has part: feature:2674178-2675191:-1:exon

XP_017911856.1
type: Protein
SIO_000068: ncbiprotein

position:2674178:-1
position: 2674178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2675191:-1
position: 2675191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2674178-2675191:-1:exon

ABHD13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ABHD13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ABHD13
translation: MEKSWVLWNFVERWLVALASWSWALCRISLLSLIVTFHLYGGIVLLLLIFISIAGILYKFQDVLLYFPEQPSSSRLYVPMPTGIPHENIFIRTKDGVRLNLILIRYTGDSSPYSPTIIYFHGNAGNIGHRLPNALLMLVNLKVNLLLVDYRGYGKSEGEASEEGLYLDSEAVLDYVMSRPDLDKTKVFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPMRYLPLWCYKNKFLSYRKISQCRMPSLFISGLSDQLIPPVMMKQLYELSPSRTKRLAIFPDGTHNDTWQCQGYFTALEQFIKEVIKSPSPEEMAKTSSNVTII
SIO_010081: ABHD13
subclass of: SO_0000673
so part of: ABHD13
location: complement(2674178..2675191)
location: region:2674178-2675191:-1
so has part: feature:2674178-2675191:-1:exon

XP_013823846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2674178-2675191:-1:exon

LIG4
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LIG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2690158..2697707
location: region:2690158-2697707:1
so has part: feature:2690158-2697707:1:exon
subclass of: SO_0000010

102182607
type: Gene
SIO_000068: ncbigene

position:2690158:1
position: 2690158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2697707:1
position: 2697707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2690158-2697707:1:exon

LIG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LIG4
product: DNA ligase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_018056368.1
SIO_010081: LIG4
subclass of: SO_0000673
so part of: LIG4
location: join(2690158..2690231,2693602..2697707)
location: region:2690158-2697707:1
so has part: feature:2690158-2690231:1:exon
so has part: feature:2693602-2697707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2690158-2690231:1:exon

position:2690231:1
position: 2690231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2693602-2697707:1:exon

position:2693602:1
position: 2693602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LIG4
product: DNA ligase 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_018056369.1
SIO_010081: LIG4
subclass of: SO_0000673
so part of: LIG4
location: join(2690189..2690226,2693602..2697707)
location: region:2690189-2697707:1
so has part: feature:2690189-2690226:1:exon
so has part: feature:2693602-2697707:1:exon

position:2690189:1
position: 2690189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2690189-2690226:1:exon

position:2690226:1
position: 2690226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2693602-2697707:1:exon

LIG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LIG4
product: DNA ligase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005687741.3
SIO_010081: LIG4
subclass of: SO_0000673
so part of: LIG4
location: join(2690249..2690486,2693602..2697707)
location: region:2690249-2697707:1
so has part: feature:2690249-2690486:1:exon
so has part: feature:2693602-2697707:1:exon

position:2690249:1
position: 2690249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2690249-2690486:1:exon

position:2690486:1
position: 2690486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2693602-2697707:1:exon

LIG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LIG4
product: DNA ligase 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005687742.3
SIO_010081: LIG4
subclass of: SO_0000673
so part of: LIG4
location: join(2690249..2690426,2693602..2697707)
location: region:2690249-2697707:1
so has part: feature:2690249-2690426:1:exon
so has part: feature:2693602-2697707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2690249-2690426:1:exon

position:2690426:1
position: 2690426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2693602-2697707:1:exon

LIG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LIG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA ligase 4
translation: MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFKAFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPHLERERMAYGIKEIMLAKLYVELLNLPRDGKDALKLLNYRTPTGTRGDAGDFAMIAYFVLKPRCLQKGSLSIKQVNDILDSIASNNSAKRKDLMKKSVLQLITQSSALEQKWLIRMIVKDLKLGFSQHTIFSVFHRDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYEDQFGASPQEGSLTPFIHNAFRTDVLNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSELQTCYCVFDVLMVNDKKLGHETLRKRFEILNSVFTPVPGRIEIVQKTQAHTKKEVIDALNEAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGARGGMMSHFLCAVAEKPASGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHRKAPPSNILCGTEKPEVYIEPCNSVIVQVKATEIVPSDMYKTGCTLRFPRIEKIREDKEWYECTSLEDLEQLRGKACGKLASKHLYVSGDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNVNRVSTVFEDVEFCVMSGTSNHPKPDLENRIAELGGYIVQNPGPDTYCVIAGSDNIRVKNIISSDKHDVVKPEWLLECFRTRSCVPWQPHFMIHMCPSTKQHFAQEYDQYGDSYFVDTDLHQLKEVFSGIKNAGEQTPGEMSPVIADLEHRYSWASMPLSMFRHHTVYLDLYAVINDLSTRIKGARLAITALELRFHGAQVVSYLAEGVSHVIVGEDQSRVADLKAIRRTLKRKFKILQERWVTVSIDKCELQEENQYLV
SIO_010081: LIG4
subclass of: SO_0000673
so part of: LIG4
location: 2693630..2696365
location: region:2693630-2696365:1
so has part: feature:2693630-2696365:1:exon

XP_005687798.2
type: Protein
SIO_000068: ncbiprotein

position:2693630:1
position: 2693630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2696365:1
position: 2696365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2693630-2696365:1:exon

LIG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LIG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA ligase 4
translation: MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFKAFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPHLERERMAYGIKEIMLAKLYVELLNLPRDGKDALKLLNYRTPTGTRGDAGDFAMIAYFVLKPRCLQKGSLSIKQVNDILDSIASNNSAKRKDLMKKSVLQLITQSSALEQKWLIRMIVKDLKLGFSQHTIFSVFHRDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYEDQFGASPQEGSLTPFIHNAFRTDVLNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSELQTCYCVFDVLMVNDKKLGHETLRKRFEILNSVFTPVPGRIEIVQKTQAHTKKEVIDALNEAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGARGGMMSHFLCAVAEKPASGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHRKAPPSNILCGTEKPEVYIEPCNSVIVQVKATEIVPSDMYKTGCTLRFPRIEKIREDKEWYECTSLEDLEQLRGKACGKLASKHLYVSGDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNVNRVSTVFEDVEFCVMSGTSNHPKPDLENRIAELGGYIVQNPGPDTYCVIAGSDNIRVKNIISSDKHDVVKPEWLLECFRTRSCVPWQPHFMIHMCPSTKQHFAQEYDQYGDSYFVDTDLHQLKEVFSGIKNAGEQTPGEMSPVIADLEHRYSWASMPLSMFRHHTVYLDLYAVINDLSTRIKGARLAITALELRFHGAQVVSYLAEGVSHVIVGEDQSRVADLKAIRRTLKRKFKILQERWVTVSIDKCELQEENQYLV
SIO_010081: LIG4
subclass of: SO_0000673
so part of: LIG4
location: 2693630..2696365
location: region:2693630-2696365:1
so has part: feature:2693630-2696365:1:exon

XP_017911857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2693630-2696365:1:exon

LIG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LIG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA ligase 4
translation: MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFKAFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPHLERERMAYGIKEIMLAKLYVELLNLPRDGKDALKLLNYRTPTGTRGDAGDFAMIAYFVLKPRCLQKGSLSIKQVNDILDSIASNNSAKRKDLMKKSVLQLITQSSALEQKWLIRMIVKDLKLGFSQHTIFSVFHRDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYEDQFGASPQEGSLTPFIHNAFRTDVLNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSELQTCYCVFDVLMVNDKKLGHETLRKRFEILNSVFTPVPGRIEIVQKTQAHTKKEVIDALNEAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGARGGMMSHFLCAVAEKPASGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHRKAPPSNILCGTEKPEVYIEPCNSVIVQVKATEIVPSDMYKTGCTLRFPRIEKIREDKEWYECTSLEDLEQLRGKACGKLASKHLYVSGDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNVNRVSTVFEDVEFCVMSGTSNHPKPDLENRIAELGGYIVQNPGPDTYCVIAGSDNIRVKNIISSDKHDVVKPEWLLECFRTRSCVPWQPHFMIHMCPSTKQHFAQEYDQYGDSYFVDTDLHQLKEVFSGIKNAGEQTPGEMSPVIADLEHRYSWASMPLSMFRHHTVYLDLYAVINDLSTRIKGARLAITALELRFHGAQVVSYLAEGVSHVIVGEDQSRVADLKAIRRTLKRKFKILQERWVTVSIDKCELQEENQYLV
SIO_010081: LIG4
subclass of: SO_0000673
so part of: LIG4
location: 2693630..2696365
location: region:2693630-2696365:1
so has part: feature:2693630-2696365:1:exon

XP_005687799.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2693630-2696365:1:exon

LIG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LIG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA ligase 4
translation: MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFKAFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPHLERERMAYGIKEIMLAKLYVELLNLPRDGKDALKLLNYRTPTGTRGDAGDFAMIAYFVLKPRCLQKGSLSIKQVNDILDSIASNNSAKRKDLMKKSVLQLITQSSALEQKWLIRMIVKDLKLGFSQHTIFSVFHRDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYEDQFGASPQEGSLTPFIHNAFRTDVLNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSELQTCYCVFDVLMVNDKKLGHETLRKRFEILNSVFTPVPGRIEIVQKTQAHTKKEVIDALNEAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGARGGMMSHFLCAVAEKPASGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHRKAPPSNILCGTEKPEVYIEPCNSVIVQVKATEIVPSDMYKTGCTLRFPRIEKIREDKEWYECTSLEDLEQLRGKACGKLASKHLYVSGDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNVNRVSTVFEDVEFCVMSGTSNHPKPDLENRIAELGGYIVQNPGPDTYCVIAGSDNIRVKNIISSDKHDVVKPEWLLECFRTRSCVPWQPHFMIHMCPSTKQHFAQEYDQYGDSYFVDTDLHQLKEVFSGIKNAGEQTPGEMSPVIADLEHRYSWASMPLSMFRHHTVYLDLYAVINDLSTRIKGARLAITALELRFHGAQVVSYLAEGVSHVIVGEDQSRVADLKAIRRTLKRKFKILQERWVTVSIDKCELQEENQYLV
SIO_010081: LIG4
subclass of: SO_0000673
so part of: LIG4
location: 2693630..2696365
location: region:2693630-2696365:1
so has part: feature:2693630-2696365:1:exon

XP_017911858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2693630-2696365:1:exon

FAM155A
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: FAM155A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2878500..3486890
location: region:2878500-3486890:1
so has part: feature:2878500-3486890:1:exon
subclass of: SO_0000010

102170529
type: Gene
SIO_000068: ncbigene

position:2878500:1
position: 2878500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3486890:1
position: 3486890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2878500-3486890:1:exon

FAM155A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FAM155A
product: family with sequence similarity 155 member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005687778.3
SIO_010081: FAM155A
subclass of: SO_0000673
so part of: FAM155A
location: join(2878500..2879902,3458474..3458645,3484729..3486890)
location: region:2878500-3486890:1
so has part: feature:2878500-2879902:1:exon
so has part: feature:3458474-3458645:1:exon
so has part: feature:3484729-3486890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2878500-2879902:1:exon

position:2879902:1
position: 2879902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3458474-3458645:1:exon

position:3458474:1
position: 3458474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3458645:1
position: 3458645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3484729-3486890:1:exon

position:3484729:1
position: 3484729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM155A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FAM155A
product: family with sequence similarity 155 member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018056370.1
SIO_010081: FAM155A
subclass of: SO_0000673
so part of: FAM155A
location: join(2878500..2879902,3458474..3458645,3482831..3482876,3484729..3484886)
location: region:2878500-3484886:1
so has part: feature:2878500-2879902:1:exon
so has part: feature:3458474-3458645:1:exon
so has part: feature:3482831-3482876:1:exon
so has part: feature:3484729-3484886:1:exon

position:3484886:1
position: 3484886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2878500-2879902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3458474-3458645:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3482831-3482876:1:exon

position:3482831:1
position: 3482831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3482876:1
position: 3482876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3484729-3484886:1:exon

FAM155A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FAM155A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein FAM155A isoform X1
translation: MTRGAWMCRQYDDGLKIWLAAPRENEKPFIDSERAQKWRLSLASLLFFTVLLSDHLWFCAEAKLTRARDKEQQQQQQQQQRQQRQRQEQRQRQRQHEPSWPALLASMGEPSPAAQAHRLLSASPSPTLPPSPGGGGGGGKGGRGTDSRGKSLLPGNSARPAWRLETCYPQGASSGQCFTVESADAVCARNWSRGAAARGDQRQQTRGPPQPTPLWNLSDFYLSFCNSYTLWELFSGLSSPNTLNCSLDVVLKEGGEMTTCRQCVEAYQDYDHHAQEKYEEFESVLHKYLQSEEYSVKSCPEDCKIVYKAWLCSQYFEVAQLNCRKTIPCKQYCLEVQTRCPFILPDNDEVIYGGLSSFICTGLYETFLTNDEPECCDVRREAKPKSPSKGAVDRGGACPRTSLSASSAPRLGPSRLRLCVLVLMLLHTVLTASAAHNATALGVGGVHALDERSASEE
SIO_010081: FAM155A
subclass of: SO_0000673
so part of: FAM155A
location: join(2878991..2879902,3458474..3458645,3484729..3485018)
location: region:2878991-3485018:1
so has part: feature:2878991-2879902:1:exon
so has part: feature:3458474-3458645:1:exon
so has part: feature:3484729-3485018:1:exon

XP_005687835.3
type: Protein
SIO_000068: ncbiprotein

position:2878991:1
position: 2878991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3485018:1
position: 3485018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2878991-2879902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3458474-3458645:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3484729-3485018:1:exon

FAM155A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FAM155A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein FAM155A isoform X2
translation: MTRGAWMCRQYDDGLKIWLAAPRENEKPFIDSERAQKWRLSLASLLFFTVLLSDHLWFCAEAKLTRARDKEQQQQQQQQQRQQRQRQEQRQRQRQHEPSWPALLASMGEPSPAAQAHRLLSASPSPTLPPSPGGGGGGGKGGRGTDSRGKSLLPGNSARPAWRLETCYPQGASSGQCFTVESADAVCARNWSRGAAARGDQRQQTRGPPQPTPLWNLSDFYLSFCNSYTLWELFSGLSSPNTLNCSLDVVLKEGGEMTTCRQCVEAYQDYDHHAQEKYEEFESVLHKYLQSEEYSVKSCPEDCKIVYKAWLCSQYFEVAQLNCRKTIPCKQYCLEVQTRCPFILPDNDEVIYGGLSSFICTGEGEVYL
SIO_010081: FAM155A
subclass of: SO_0000673
so part of: FAM155A
location: join(2878991..2879902,3458474..3458645,3482831..3482853)
location: region:2878991-3482853:1
so has part: feature:2878991-2879902:1:exon
so has part: feature:3458474-3458645:1:exon
so has part: feature:3482831-3482853:1:exon

XP_017911859.1
type: Protein
SIO_000068: ncbiprotein

position:3482853:1
position: 3482853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2878991-2879902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3458474-3458645:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3482831-3482853:1:exon

ARGLU1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ARGLU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3957010..3981786
location: region:3957010-3981786:1
so has part: feature:3957010-3981786:1:exon
subclass of: SO_0000010

102170245
type: Gene
SIO_000068: ncbigene

position:3957010:1
position: 3957010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3981786:1
position: 3981786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3957010-3981786:1:exon

ARGLU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ARGLU1
product: arginine and glutamate rich 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 145 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_018056371.1
SIO_010081: ARGLU1
subclass of: SO_0000673
so part of: ARGLU1
location: join(3957010..3957624,3965973..3966198,3968489..3968572,3980919..3981786)
location: region:3957010-3981786:1
so has part: feature:3957010-3957624:1:exon
so has part: feature:3965973-3966198:1:exon
so has part: feature:3968489-3968572:1:exon
so has part: feature:3980919-3981786:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3957010-3957624:1:exon

position:3957624:1
position: 3957624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3965973-3966198:1:exon

position:3965973:1
position: 3965973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3966198:1
position: 3966198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3968489-3968572:1:exon

position:3968489:1
position: 3968489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3968572:1
position: 3968572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3980919-3981786:1:exon

position:3980919:1
position: 3980919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARGLU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ARGLU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arginine and glutamate-rich protein 1
translation: MGRSRSRSSSRSKHTKSSKHNKKRSRSRSRSRDKERVRKRSKSRESKRNRRRESRSRSRSTNTAVSRRERDRERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQRQAELAAQKAREEEERAKREELERILEENNRKIAEAQAKLAEEQLRIVEEQRKIHEERMKLEQERQRQQKEEQKIILGKGKSRPKLSFSLKTQD
SIO_010081: ARGLU1
subclass of: SO_0000673
so part of: ARGLU1
location: join(3957278..3957624,3965973..3966198,3968489..3968572,3980919..3981083)
location: region:3957278-3981083:1
so has part: feature:3957278-3957624:1:exon
so has part: feature:3965973-3966198:1:exon
so has part: feature:3968489-3968572:1:exon
so has part: feature:3980919-3981083:1:exon

XP_017911860.1
type: Protein
SIO_000068: ncbiprotein

position:3957278:1
position: 3957278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3981083:1
position: 3981083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3957278-3957624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3965973-3966198:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3968489-3968572:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3980919-3981083:1:exon

EFNB2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: EFNB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3989377..4038611
location: region:3989377-4038611:1
so has part: feature:3989377-4038611:1:exon
subclass of: SO_0000010

102169974
type: Gene
SIO_000068: ncbigene

position:3989377:1
position: 3989377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4038611:1
position: 4038611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3989377-4038611:1:exon

EFNB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: EFNB2
product: ephrin B2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 48 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_018056372.1
SIO_010081: EFNB2
subclass of: SO_0000673
so part of: EFNB2
location: join(3989377..3989856,4014664..4014947,4031728..4031820,4032555..4032668,4034879..4038611)
location: region:3989377-4038611:1
so has part: feature:3989377-3989856:1:exon
so has part: feature:4014664-4014947:1:exon
so has part: feature:4031728-4031820:1:exon
so has part: feature:4032555-4032668:1:exon
so has part: feature:4034879-4038611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3989377-3989856:1:exon

position:3989856:1
position: 3989856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4014664-4014947:1:exon

position:4014664:1
position: 4014664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4014947:1
position: 4014947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4031728-4031820:1:exon

position:4031728:1
position: 4031728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4031820:1
position: 4031820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4032555-4032668:1:exon

position:4032555:1
position: 4032555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4032668:1
position: 4032668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4034879-4038611:1:exon

position:4034879:1
position: 4034879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EFNB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: EFNB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin-B2
translation: MAARRDSLWKYCWGVLMVLCRTAISRSIVLEPIYWNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNRDYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDASSAGSTRHNDPTRRPEFEAGTNGRSSTTSPFVKPNSGSSTDGSSAGHSGSNILGSEVALFAGIASGCIIFIVIIITLVVLLLKYRRRHRKHSPQHAATLSLSTLATPKRGGNNNGSEPSDIIIPLRTADSVFCPHYEKVSGDYGHPVYIVQEMPPQSPANIYYKV
SIO_010081: EFNB2
subclass of: SO_0000673
so part of: EFNB2
location: join(3989735..3989856,4014664..4014947,4031728..4031820,4032555..4032668,4034879..4035267)
location: region:3989735-4035267:1
so has part: feature:3989735-3989856:1:exon
so has part: feature:4014664-4014947:1:exon
so has part: feature:4031728-4031820:1:exon
so has part: feature:4032555-4032668:1:exon
so has part: feature:4034879-4035267:1:exon

XP_017911861.1
type: Protein
SIO_000068: ncbiprotein

position:3989735:1
position: 3989735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4035267:1
position: 4035267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3989735-3989856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4014664-4014947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4031728-4031820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4032555-4032668:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4034879-4035267:1:exon

LOC108637268
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108637268
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4258325..4258696)
location: region:4258325-4258696:-1
so has part: feature:4258325-4258696:-1:exon

108637268
type: Gene
SIO_000068: ncbigene

position:4258325:-1
position: 4258325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4258696:-1
position: 4258696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4258325-4258696:-1:exon

LOC108637268
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9925
gene: LOC108637268
product: translation machinery-associated protein 7 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 37 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_001918912.1
SIO_010081: LOC108637268
so part of: LOC108637268
location: complement(4258325..4258696)
location: region:4258325-4258696:-1
so has part: feature:4258325-4258696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4258325-4258696:-1:exon

TRNAS-GGA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAS-GGA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5536296..5536367
location: region:5536296-5536367:1
so has part: feature:5536296-5536367:1:exon
subclass of: SO_0000663

108637311
type: Gene
SIO_000068: ncbigene

position:5536296:1
position: 5536296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5536367:1
position: 5536367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5536296-5536367:1:exon

TRNAS-GGA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAS-GGA
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon GGA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5536329..5536331,aa:Ser,seq:gga)
SIO_010081: TRNAS-GGA
subclass of: SO_0000673
so part of: TRNAS-GGA
location: 5536296..5536367
location: region:5536296-5536367:1
so has part: feature:5536296-5536367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5536296-5536367:1:exon

SLC10A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: SLC10A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7008071..7029124
location: region:7008071-7029124:1
so has part: feature:7008071-7029124:1:exon
subclass of: SO_0000010

102182143
type: Gene
SIO_000068: ncbigene

position:7008071:1
position: 7008071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7029124:1
position: 7029124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7008071-7029124:1:exon

SLC10A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: SLC10A2
product: solute carrier family 10 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005687740.3
SIO_010081: SLC10A2
subclass of: SO_0000673
so part of: SLC10A2
location: join(7008071..7008594,7016423..7016541,7021260..7021348,7023014..7023189,7025556..7025713,7028198..7029124)
location: region:7008071-7029124:1
so has part: feature:7008071-7008594:1:exon
so has part: feature:7016423-7016541:1:exon
so has part: feature:7021260-7021348:1:exon
so has part: feature:7023014-7023189:1:exon
so has part: feature:7025556-7025713:1:exon
so has part: feature:7028198-7029124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7008071-7008594:1:exon

position:7008594:1
position: 7008594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7016423-7016541:1:exon

position:7016423:1
position: 7016423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7016541:1
position: 7016541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7021260-7021348:1:exon

position:7021260:1
position: 7021260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7021348:1
position: 7021348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7023014-7023189:1:exon

position:7023014:1
position: 7023014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7023189:1
position: 7023189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7025556-7025713:1:exon

position:7025556:1
position: 7025556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7025713:1
position: 7025713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7028198-7029124:1:exon

position:7028198:1
position: 7028198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC10A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: SLC10A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ileal sodium/bile acid cotransporter
translation: MDNSMVCLANATVCNGTSCLVPESNFNAVLSAVLSAVLTTLLALVMFSMGCNVELKKFLGHIKRPWGICIGFLCQFGIMPLTGFILSVAFDIIPIQAVVVLIMGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWVDAGMIVIPYDNIGISLVALVVPVSVGMYVNHKWPRKAKIILKIGSITGALLIVLIAVVGGVLYQSAWIIEPKLWIIGTIFPIAGYSLGFVLARIAGQSWHRCRTVALETGMQNTQLCSTIVQLSFTPEELNLIFTFPLIYSIFQIIAAALFLAAYVVHKKYFRKNSVEFPESRENEQVPQSSLQ
SIO_010081: SLC10A2
subclass of: SO_0000673
so part of: SLC10A2
location: join(7008218..7008594,7016423..7016541,7021260..7021348,7023014..7023189,7025556..7025713,7028198..7028292)
location: region:7008218-7028292:1
so has part: feature:7008218-7008594:1:exon
so has part: feature:7016423-7016541:1:exon
so has part: feature:7021260-7021348:1:exon
so has part: feature:7023014-7023189:1:exon
so has part: feature:7025556-7025713:1:exon
so has part: feature:7028198-7028292:1:exon

XP_005687797.2
type: Protein
SIO_000068: ncbiprotein

position:7008218:1
position: 7008218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7028292:1
position: 7028292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7008218-7008594:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7016423-7016541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7021260-7021348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7023014-7023189:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7025556-7025713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7028198-7028292:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 7038014..7038084
location: region:7038014-7038084:1
so has part: feature:7038014-7038084:1:exon
subclass of: SO_0000663

108637322
type: Gene
SIO_000068: ncbigene

position:7038014:1
position: 7038014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7038084:1
position: 7038084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7038014-7038084:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:7038047..7038049,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 7038014..7038084
location: region:7038014-7038084:1
so has part: feature:7038014-7038084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7038014-7038084:1:exon

LOC102181510
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102181510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7170149..7187253)
location: region:7170149-7187253:-1
so has part: feature:7170149-7187253:-1:exon
subclass of: SO_0000010

102181510
type: Gene
SIO_000068: ncbigene

position:7170149:-1
position: 7170149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7187253:-1
position: 7187253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7170149-7187253:-1:exon

LOC102181510
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102181510
product: protein-lysine methyltransferase METTL21E, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_013968398.2
SIO_010081: LOC102181510
subclass of: SO_0000673
so part of: LOC102181510
location: complement(join(7170149..7171944,7174925..7175042,7176216..7176382,7186941..7187253))
location: region:7170149-7187253:-1
so has part: feature:7186941-7187253:-1:exon
so has part: feature:7176216-7176382:-1:exon
so has part: feature:7174925-7175042:-1:exon
so has part: feature:7170149-7171944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7186941-7187253:-1:exon

position:7186941:-1
position: 7186941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7176216-7176382:-1:exon

position:7176216:-1
position: 7176216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7176382:-1
position: 7176382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7174925-7175042:-1:exon

position:7174925:-1
position: 7174925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7175042:-1
position: 7175042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7170149-7171944:-1:exon

position:7171944:-1
position: 7171944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102181510
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102181510
product: protein-lysine methyltransferase METTL21E, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005687738.3
SIO_010081: LOC102181510
subclass of: SO_0000673
so part of: LOC102181510
location: complement(join(7170150..7171944,7174925..7175042,7176216..7176382,7185888..7185967,7186689..7186820))
location: region:7170150-7186820:-1
so has part: feature:7186689-7186820:-1:exon
so has part: feature:7185888-7185967:-1:exon
so has part: feature:7176216-7176382:-1:exon
so has part: feature:7174925-7175042:-1:exon
so has part: feature:7170150-7171944:-1:exon

position:7170150:-1
position: 7170150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7186820:-1
position: 7186820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7186689-7186820:-1:exon

position:7186689:-1
position: 7186689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7185888-7185967:-1:exon

position:7185888:-1
position: 7185888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7185967:-1
position: 7185967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7176216-7176382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7174925-7175042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7170150-7171944:-1:exon

LOC102181510
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102181510
product: protein-lysine methyltransferase METTL21E, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_018056373.1
SIO_010081: LOC102181510
subclass of: SO_0000673
so part of: LOC102181510
location: complement(join(7170150..7171944,7174925..7175042,7176216..7176382,7185888..7185967,7186355..7186430))
location: region:7170150-7186430:-1
so has part: feature:7186355-7186430:-1:exon
so has part: feature:7185888-7185967:-1:exon
so has part: feature:7176216-7176382:-1:exon
so has part: feature:7174925-7175042:-1:exon
so has part: feature:7170150-7171944:-1:exon

position:7186430:-1
position: 7186430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7186355-7186430:-1:exon

position:7186355:-1
position: 7186355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7185888-7185967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7176216-7176382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7174925-7175042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7170150-7171944:-1:exon

LOC102181510
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102181510
product: protein-lysine methyltransferase METTL21E, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005687737.3
SIO_010081: LOC102181510
subclass of: SO_0000673
so part of: LOC102181510
location: complement(join(7170151..7171944,7174925..7175042,7176216..7176382,7185888..7185967,7186941..7187253))
location: region:7170151-7187253:-1
so has part: feature:7186941-7187253:-1:exon
so has part: feature:7185888-7185967:-1:exon
so has part: feature:7176216-7176382:-1:exon
so has part: feature:7174925-7175042:-1:exon
so has part: feature:7170151-7171944:-1:exon

position:7170151:-1
position: 7170151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7186941-7187253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7185888-7185967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7176216-7176382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7174925-7175042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7170151-7171944:-1:exon

LOC102181510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102181510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-lysine methyltransferase METTL21E isoform X1
translation: MILFNLLETQLTRVHSFQEMIKKASLYRHPLANHLMDPEVQKESGEDDDDRTVVAEIMQRCFVPAFVTTIPWEGFHFAGHEIRINEATDCYGAVVWPSALVLCYFLETNVKQYNLADKNVIEIGAGTGLVSIVASLLGAHVTATDLPELLGNLQYNISRNTRMKAKYLPQVKELSWGVALDENFPRASTNFDYILAADVVYAHPFLEELLVTFDHLCKETTIILWVMKFRLEKENKFVDRFEQLFDLEEISSFPSLNIKLYKAMKKNQKNACYPQRRMWKAKAISGRLLL
SIO_010081: LOC102181510
subclass of: SO_0000673
so part of: LOC102181510
location: complement(join(7171484..7171944,7174925..7175042,7176216..7176382,7185888..7185967,7186941..7186987))
location: region:7171484-7186987:-1
so has part: feature:7186941-7186987:-1:exon
so has part: feature:7185888-7185967:-1:exon
so has part: feature:7176216-7176382:-1:exon
so has part: feature:7174925-7175042:-1:exon
so has part: feature:7171484-7171944:-1:exon

XP_005687794.2
type: Protein
SIO_000068: ncbiprotein

position:7171484:-1
position: 7171484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7186987:-1
position: 7186987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7186941-7186987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7185888-7185967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7176216-7176382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7174925-7175042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7171484-7171944:-1:exon

LOC102181510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102181510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-lysine methyltransferase METTL21E isoform X2
translation: MIKKASLYRHPLANHLMDPEVQKESGEDDDDRTVVAEIMQRCFVPAFVTTIPWEGFHFAGHEIRINEATDCYGAVVWPSALVLCYFLETNVKQYNLADKNVIEIGAGTGLVSIVASLLGAHVTATDLPELLGNLQYNISRNTRMKAKYLPQVKELSWGVALDENFPRASTNFDYILAADVVYAHPFLEELLVTFDHLCKETTIILWVMKFRLEKENKFVDRFEQLFDLEEISSFPSLNIKLYKAMKKNQKNACYPQRRMWKAKAISGRLLL
SIO_010081: LOC102181510
subclass of: SO_0000673
so part of: LOC102181510
location: complement(join(7171484..7171944,7174925..7175042,7176216..7176382,7185888..7185957))
location: region:7171484-7185957:-1
so has part: feature:7185888-7185957:-1:exon
so has part: feature:7176216-7176382:-1:exon
so has part: feature:7174925-7175042:-1:exon
so has part: feature:7171484-7171944:-1:exon

XP_005687795.2
type: Protein
SIO_000068: ncbiprotein

position:7185957:-1
position: 7185957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7185888-7185957:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7176216-7176382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7174925-7175042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7171484-7171944:-1:exon

LOC102181510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102181510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-lysine methyltransferase METTL21E isoform X2
translation: MIKKASLYRHPLANHLMDPEVQKESGEDDDDRTVVAEIMQRCFVPAFVTTIPWEGFHFAGHEIRINEATDCYGAVVWPSALVLCYFLETNVKQYNLADKNVIEIGAGTGLVSIVASLLGAHVTATDLPELLGNLQYNISRNTRMKAKYLPQVKELSWGVALDENFPRASTNFDYILAADVVYAHPFLEELLVTFDHLCKETTIILWVMKFRLEKENKFVDRFEQLFDLEEISSFPSLNIKLYKAMKKNQKNACYPQRRMWKAKAISGRLLL
SIO_010081: LOC102181510
subclass of: SO_0000673
so part of: LOC102181510
location: complement(join(7171484..7171944,7174925..7175042,7176216..7176382,7185888..7185957))
location: region:7171484-7185957:-1
so has part: feature:7185888-7185957:-1:exon
so has part: feature:7176216-7176382:-1:exon
so has part: feature:7174925-7175042:-1:exon
so has part: feature:7171484-7171944:-1:exon

XP_017911862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7185888-7185957:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7176216-7176382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7174925-7175042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7171484-7171944:-1:exon

LOC102181510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102181510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-lysine methyltransferase METTL21E isoform X3
translation: MQRCFVPAFVTTIPWEGFHFAGHEIRINEATDCYGAVVWPSALVLCYFLETNVKQYNLADKNVIEIGAGTGLVSIVASLLGAHVTATDLPELLGNLQYNISRNTRMKAKYLPQVKELSWGVALDENFPRASTNFDYILAADVVYAHPFLEELLVTFDHLCKETTIILWVMKFRLEKENKFVDRFEQLFDLEEISSFPSLNIKLYKAMKKNQKNACYPQRRMWKAKAISGRLLL
SIO_010081: LOC102181510
subclass of: SO_0000673
so part of: LOC102181510
location: complement(join(7171484..7171944,7174925..7175042,7176216..7176338))
location: region:7171484-7176338:-1
so has part: feature:7176216-7176338:-1:exon
so has part: feature:7174925-7175042:-1:exon
so has part: feature:7171484-7171944:-1:exon

XP_013823852.2
type: Protein
SIO_000068: ncbiprotein

position:7176338:-1
position: 7176338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7176216-7176338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7174925-7175042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7171484-7171944:-1:exon

ERCC5
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ERCC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7192756..7223633)
location: region:7192756-7223633:-1
so has part: feature:7192756-7223633:-1:exon
subclass of: SO_0000010

102169681
type: Gene
SIO_000068: ncbigene

position:7192756:-1
position: 7192756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7223633:-1
position: 7223633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7192756-7223633:-1:exon

ERCC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ERCC5
product: ERCC excision repair 5, endonuclease, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_013968375.2
SIO_010081: ERCC5
subclass of: SO_0000673
so part of: ERCC5
location: complement(join(7192756..7193442,7195108..7195182,7196285..7196485,7199082..7199226,7200893..7201106,7201278..7201397,7201738..7201985,7204934..7206031,7206358..7206565,7208890..7209033,7216082..7216142,7217193..7217276,7217671..7217786,7218701..7218876,7222778..7223633))
location: region:7192756-7223633:-1
so has part: feature:7222778-7223633:-1:exon
so has part: feature:7218701-7218876:-1:exon
so has part: feature:7217671-7217786:-1:exon
so has part: feature:7217193-7217276:-1:exon
so has part: feature:7216082-7216142:-1:exon
so has part: feature:7208890-7209033:-1:exon
so has part: feature:7206358-7206565:-1:exon
so has part: feature:7204934-7206031:-1:exon
so has part: feature:7201738-7201985:-1:exon
so has part: feature:7201278-7201397:-1:exon
so has part: feature:7200893-7201106:-1:exon
so has part: feature:7199082-7199226:-1:exon
so has part: feature:7196285-7196485:-1:exon
so has part: feature:7195108-7195182:-1:exon
so has part: feature:7192756-7193442:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7222778-7223633:-1:exon

position:7222778:-1
position: 7222778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7218701-7218876:-1:exon

position:7218701:-1
position: 7218701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7218876:-1
position: 7218876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7217671-7217786:-1:exon

position:7217671:-1
position: 7217671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7217786:-1
position: 7217786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7217193-7217276:-1:exon

position:7217193:-1
position: 7217193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7217276:-1
position: 7217276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7216082-7216142:-1:exon

position:7216082:-1
position: 7216082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7216142:-1
position: 7216142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7208890-7209033:-1:exon

position:7208890:-1
position: 7208890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7209033:-1
position: 7209033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7206358-7206565:-1:exon

position:7206358:-1
position: 7206358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7206565:-1
position: 7206565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7204934-7206031:-1:exon

position:7204934:-1
position: 7204934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7206031:-1
position: 7206031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7201738-7201985:-1:exon

position:7201738:-1
position: 7201738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7201985:-1
position: 7201985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7201278-7201397:-1:exon

position:7201278:-1
position: 7201278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7201397:-1
position: 7201397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7200893-7201106:-1:exon

position:7200893:-1
position: 7200893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7201106:-1
position: 7201106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7199082-7199226:-1:exon

position:7199082:-1
position: 7199082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7199226:-1
position: 7199226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7196285-7196485:-1:exon

position:7196285:-1
position: 7196285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7196485:-1
position: 7196485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7195108-7195182:-1:exon

position:7195108:-1
position: 7195108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7195182:-1
position: 7195182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7192756-7193442:-1:exon

position:7193442:-1
position: 7193442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ERCC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ERCC5
product: ERCC excision repair 5, endonuclease, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005687775.3
SIO_010081: ERCC5
subclass of: SO_0000673
so part of: ERCC5
location: complement(join(7192756..7193442,7195108..7195192,7196285..7196485,7199082..7199226,7200893..7201106,7201278..7201397,7201738..7201985,7204934..7206031,7206358..7206565,7208890..7209033,7216082..7216142,7217193..7217276,7217671..7217786,7218701..7218876,7222778..7223626))
location: region:7192756-7223626:-1
so has part: feature:7222778-7223626:-1:exon
so has part: feature:7218701-7218876:-1:exon
so has part: feature:7217671-7217786:-1:exon
so has part: feature:7217193-7217276:-1:exon
so has part: feature:7216082-7216142:-1:exon
so has part: feature:7208890-7209033:-1:exon
so has part: feature:7206358-7206565:-1:exon
so has part: feature:7204934-7206031:-1:exon
so has part: feature:7201738-7201985:-1:exon
so has part: feature:7201278-7201397:-1:exon
so has part: feature:7200893-7201106:-1:exon
so has part: feature:7199082-7199226:-1:exon
so has part: feature:7196285-7196485:-1:exon
so has part: feature:7195108-7195192:-1:exon
so has part: feature:7192756-7193442:-1:exon

position:7223626:-1
position: 7223626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7222778-7223626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7218701-7218876:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7217671-7217786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7217193-7217276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7216082-7216142:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7208890-7209033:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7206358-7206565:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7204934-7206031:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7201738-7201985:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7201278-7201397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7200893-7201106:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7199082-7199226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7196285-7196485:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7195108-7195192:-1:exon

position:7195192:-1
position: 7195192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7192756-7193442:-1:exon

ERCC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ERCC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair protein complementing XP-G cells isoform X1
translation: MGVQGLWKLLECSGRQISPETLEGKILAVDISIWLNQALKGVRDRHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLAKRRHKKDLAASDSKTTTEKLLKTFLKRQVIKTALKSKREETLPSLTQVQRDDIYALPPLQEREKNSSEEEDEKEWQERMSQKQALQEEFFHNPHAVDIESEDFNSLPLEVKHEILTDMKEFTKRRRTLFEAMPEESNDFSQYQLKGLLKKNYLNQHIENVEKEMNQQHSGKIQRQYEDEGGFLKEVESRRVVSEDTSHYILIKGVQVKKVTEADSESLPSCSEKHSGALDTKSPPCETLKPKKEPDTSPPSPRTLLAMQAALLGSSSEDELEGKHRRQCDVKSPPAPASEGSVSPLTLLAIQRALDDDDEDLKVHVGVQTEGAGRRKPRPLVSSSDEEAVEEPEVRDGDRELLTAAPRAASVTLTEEHVTKTSDEKEQTDSAPLLQTVFCQGSESSFPKEQTPSMHALKEPFQTSAESTAQDGKDLVPHRDVPGLPGGPEQIPTPPASPSSGSKSGTYTRVSEPQQALPPESKHDTSVLSSDDEAESEKNPAPDIVGTTSLQESSNTLSVAIDTVSDLGNEAPISAPEHENFLKTIQEHESVESAGQGLILVPESTELTEVDSEDSESDGSFIEVQSISSSDELRAELQEASRPPSGQGQEEPTGTEKEEATSDSEGLPREISESEAVAIERREETEKDAEDSLHEWQDIDLDELEALESNLLTQQNSLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLQKFSEWWHEAQENKKIRPNPYDTKVKKKLRKLQLTPGFPNPAVADAYLKPVVDESKGSFLWGKPDLDKIREFCQRYFGWNRTKTDESLFPVLKQLNVHQTQLRIDSFFRLAQQEKQEAKGIKSQRLNRAVTCMLRKEREAAASEIEAASVAMEKESEFLDEAKGKTQKRGTANRWEEPSSPKRKRLLDSKGGNESGGFLGEAYLSQSSEASSSEDAEYFPAMGVQRMKAPGGSRARSSDARSTAQPASRRDGGTTTSSSSEDDDGGRAKPVLVTARPVFGKKKRRRRGTRGRK
SIO_010081: ERCC5
subclass of: SO_0000673
so part of: ERCC5
location: complement(join(7192858..7193442,7195108..7195192,7196285..7196485,7199082..7199226,7200893..7201106,7201278..7201397,7201738..7201985,7204934..7206031,7206358..7206565,7208890..7209033,7216082..7216142,7217193..7217276,7217671..7217786,7218701..7218876,7222778..7222865))
location: region:7192858-7222865:-1
so has part: feature:7222778-7222865:-1:exon
so has part: feature:7218701-7218876:-1:exon
so has part: feature:7217671-7217786:-1:exon
so has part: feature:7217193-7217276:-1:exon
so has part: feature:7216082-7216142:-1:exon
so has part: feature:7208890-7209033:-1:exon
so has part: feature:7206358-7206565:-1:exon
so has part: feature:7204934-7206031:-1:exon
so has part: feature:7201738-7201985:-1:exon
so has part: feature:7201278-7201397:-1:exon
so has part: feature:7200893-7201106:-1:exon
so has part: feature:7199082-7199226:-1:exon
so has part: feature:7196285-7196485:-1:exon
so has part: feature:7195108-7195192:-1:exon
so has part: feature:7192858-7193442:-1:exon

XP_005687832.3
type: Protein
SIO_000068: ncbiprotein

position:7192858:-1
position: 7192858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7222865:-1
position: 7222865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7222778-7222865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7218701-7218876:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7217671-7217786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7217193-7217276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7216082-7216142:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7208890-7209033:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7206358-7206565:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7204934-7206031:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7201738-7201985:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7201278-7201397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7200893-7201106:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7199082-7199226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7196285-7196485:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7195108-7195192:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7192858-7193442:-1:exon

ERCC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ERCC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair protein complementing XP-G cells isoform X2
translation: MGVQGLWKLLECSGRQISPETLEGKILAVDISIWLNQALKGVRDRHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLAKRRHKKDLAASDSKTTTEKLLKTFLKRQVIKTALKSKREETLPSLTQVQRDDIYALPPLQEREKNSSEEEDEKEWQERMSQKQALQEEFFHNPHAVDIESEDFNSLPLEVKHEILTDMKEFTKRRRTLFEAMPEESNDFSQYQLKGLLKKNYLNQHIENVEKEMNQQHSGKIQRQYEDEGGFLKEVESRRVVSEDTSHYILIKGVQVKKVTEADSESLPSCSEKHSGALDTKSPPCETLKPKKEPDTSPPSPRTLLAMQAALLGSSSEDELEGKHRRQCDVKSPPAPASEGSVSPLTLLAIQRALDDDDEDLKVHVGVQTEGAGRRKPRPLVSSSDEEAVEEPEVRDGDRELLTAAPRAASVTLTEEHVTKTSDEKEQTDSAPLLQTVFCQGSESSFPKEQTPSMHALKEPFQTSAESTAQDGKDLVPHRDVPGLPGGPEQIPTPPASPSSGSKSGTYTRVSEPQQALPPESKHDTSVLSSDDEAESEKNPAPDIVGTTSLQESSNTLSVAIDTVSDLGNEAPISAPEHENFLKTIQEHESVESAGQGLILVPESTELTEVDSEDSESDGSFIEVQSISSSDELRAELQEASRPPSGQGQEEPTGTEKEEATSDSEGLPREISESEAVAIERREETEKDAEDSLHEWQDIDLDELEALESNLLTQQNSLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLQKFSEWWHEAQENKKIRPNPYDTKVKKKLRKLQLTPGFPNPAVADAYLKPVVDESKGSFLWGKPDLDKIRDGILAGTGRRQMNLCFLY
SIO_010081: ERCC5
subclass of: SO_0000673
so part of: ERCC5
location: complement(join(7195128..7195182,7196285..7196485,7199082..7199226,7200893..7201106,7201278..7201397,7201738..7201985,7204934..7206031,7206358..7206565,7208890..7209033,7216082..7216142,7217193..7217276,7217671..7217786,7218701..7218876,7222778..7222865))
location: region:7195128-7222865:-1
so has part: feature:7222778-7222865:-1:exon
so has part: feature:7218701-7218876:-1:exon
so has part: feature:7217671-7217786:-1:exon
so has part: feature:7217193-7217276:-1:exon
so has part: feature:7216082-7216142:-1:exon
so has part: feature:7208890-7209033:-1:exon
so has part: feature:7206358-7206565:-1:exon
so has part: feature:7204934-7206031:-1:exon
so has part: feature:7201738-7201985:-1:exon
so has part: feature:7201278-7201397:-1:exon
so has part: feature:7200893-7201106:-1:exon
so has part: feature:7199082-7199226:-1:exon
so has part: feature:7196285-7196485:-1:exon
so has part: feature:7195128-7195182:-1:exon

XP_013823829.2
type: Protein
SIO_000068: ncbiprotein

position:7195128:-1
position: 7195128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7222778-7222865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7218701-7218876:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7217671-7217786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7217193-7217276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7216082-7216142:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7208890-7209033:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7206358-7206565:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7204934-7206031:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7201738-7201985:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7201278-7201397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7200893-7201106:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7199082-7199226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7196285-7196485:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7195128-7195182:-1:exon

BIVM
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: BIVM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7228021..7258127)
location: region:7228021-7258127:-1
so has part: feature:7228021-7258127:-1:exon
subclass of: SO_0000010

102180864
type: Gene
SIO_000068: ncbigene

position:7228021:-1
position: 7228021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7258127:-1
position: 7258127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7228021-7258127:-1:exon

BIVM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: BIVM
product: basic, immunoglobulin-like variable motif containing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 33 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_018056374.1
SIO_010081: BIVM
subclass of: SO_0000673
so part of: BIVM
location: complement(join(7228021..7229946,7231711..7231807,7232754..7232840,7233462..7233594,7241308..7241402,7241621..7241725,7242258..7242353,7244739..7244865,7248543..7249140,7257749..7258127))
location: region:7228021-7258127:-1
so has part: feature:7257749-7258127:-1:exon
so has part: feature:7248543-7249140:-1:exon
so has part: feature:7244739-7244865:-1:exon
so has part: feature:7242258-7242353:-1:exon
so has part: feature:7241621-7241725:-1:exon
so has part: feature:7241308-7241402:-1:exon
so has part: feature:7233462-7233594:-1:exon
so has part: feature:7232754-7232840:-1:exon
so has part: feature:7231711-7231807:-1:exon
so has part: feature:7228021-7229946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7257749-7258127:-1:exon

position:7257749:-1
position: 7257749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7248543-7249140:-1:exon

position:7248543:-1
position: 7248543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7249140:-1
position: 7249140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7244739-7244865:-1:exon

position:7244739:-1
position: 7244739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7244865:-1
position: 7244865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7242258-7242353:-1:exon

position:7242258:-1
position: 7242258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7242353:-1
position: 7242353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7241621-7241725:-1:exon

position:7241621:-1
position: 7241621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7241725:-1
position: 7241725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7241308-7241402:-1:exon

position:7241308:-1
position: 7241308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7241402:-1
position: 7241402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7233462-7233594:-1:exon

position:7233462:-1
position: 7233462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7233594:-1
position: 7233594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7232754-7232840:-1:exon

position:7232754:-1
position: 7232754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7232840:-1
position: 7232840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7231711-7231807:-1:exon

position:7231711:-1
position: 7231711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7231807:-1
position: 7231807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7228021-7229946:-1:exon

position:7229946:-1
position: 7229946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BIVM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: BIVM
product: basic, immunoglobulin-like variable motif containing, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_018056376.1
SIO_010081: BIVM
subclass of: SO_0000673
so part of: BIVM
location: complement(join(7228021..7229946,7231711..7231807,7232754..7232837,7233462..7233594,7241308..7241402,7241621..7241725,7242258..7242353,7244739..7244865,7248543..7249140,7257749..7257860))
location: region:7228021-7257860:-1
so has part: feature:7257749-7257860:-1:exon
so has part: feature:7248543-7249140:-1:exon
so has part: feature:7244739-7244865:-1:exon
so has part: feature:7242258-7242353:-1:exon
so has part: feature:7241621-7241725:-1:exon
so has part: feature:7241308-7241402:-1:exon
so has part: feature:7233462-7233594:-1:exon
so has part: feature:7232754-7232837:-1:exon
so has part: feature:7231711-7231807:-1:exon
so has part: feature:7228021-7229946:-1:exon

position:7257860:-1
position: 7257860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7257749-7257860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7248543-7249140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7244739-7244865:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7242258-7242353:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7241621-7241725:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7241308-7241402:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7233462-7233594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7232754-7232837:-1:exon

position:7232837:-1
position: 7232837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7231711-7231807:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7228021-7229946:-1:exon

BIVM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: BIVM
product: basic, immunoglobulin-like variable motif containing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 30 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018056375.1
SIO_010081: BIVM
subclass of: SO_0000673
so part of: BIVM
location: complement(join(7228021..7229946,7231711..7231807,7232754..7232840,7233462..7233594,7241308..7241402,7241621..7241725,7242258..7242353,7244739..7244865,7248543..7249140,7256024..7256205,7257749..7257842))
location: region:7228021-7257842:-1
so has part: feature:7257749-7257842:-1:exon
so has part: feature:7256024-7256205:-1:exon
so has part: feature:7248543-7249140:-1:exon
so has part: feature:7244739-7244865:-1:exon
so has part: feature:7242258-7242353:-1:exon
so has part: feature:7241621-7241725:-1:exon
so has part: feature:7241308-7241402:-1:exon
so has part: feature:7233462-7233594:-1:exon
so has part: feature:7232754-7232840:-1:exon
so has part: feature:7231711-7231807:-1:exon
so has part: feature:7228021-7229946:-1:exon

position:7257842:-1
position: 7257842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7257749-7257842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7256024-7256205:-1:exon

position:7256024:-1
position: 7256024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7256205:-1
position: 7256205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7248543-7249140:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7244739-7244865:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7242258-7242353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7241621-7241725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7241308-7241402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7233462-7233594:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7232754-7232840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7231711-7231807:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7228021-7229946:-1:exon

BIVM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: BIVM
product: basic, immunoglobulin-like variable motif containing, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_018056377.1
SIO_010081: BIVM
subclass of: SO_0000673
so part of: BIVM
location: complement(join(7228021..7229946,7231711..7231807,7232754..7232840,7233462..7233594,7241308..7241402,7241621..7241725,7242258..7242353,7244739..7244865,7257749..7257838))
location: region:7228021-7257838:-1
so has part: feature:7257749-7257838:-1:exon
so has part: feature:7244739-7244865:-1:exon
so has part: feature:7242258-7242353:-1:exon
so has part: feature:7241621-7241725:-1:exon
so has part: feature:7241308-7241402:-1:exon
so has part: feature:7233462-7233594:-1:exon
so has part: feature:7232754-7232840:-1:exon
so has part: feature:7231711-7231807:-1:exon
so has part: feature:7228021-7229946:-1:exon

position:7257838:-1
position: 7257838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7257749-7257838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7244739-7244865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7242258-7242353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7241621-7241725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7241308-7241402:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7233462-7233594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7232754-7232840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7231711-7231807:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7228021-7229946:-1:exon

BIVM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: BIVM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic immunoglobulin-like variable motif-containing protein isoform X2
translation: MPNVAEAEGADDSGNGEHKSERRSPEESLQGAVQSFCTRASGEPLGPRGDGHYPWSCPVTHTREKIYAICSDYAFLNQATSIYKTPNPARSCLSDSTSLSAANNSSRYIGISASTSDIIYNEENSLENLSNSLGKLPLAWEIDKSEFDGVTTNLKHKSGNGKKQVSKKKTSDKKGKHQREWAQYSPLEDIKQRKVLDLRRWYCISRPQYKTSCGISSLVSCWNFLYSTMGAGNLPAITQEEALHILGFQPPFEDIRFGPFTGNTTLMRWFRQINDHFHVKGCSYVLYKPHGKNKTAGETASGALSKLTHGLKDESLAYIYHCQNHYFCPIGFEATPVKANKAYRGPLTPQEVEYWILIGESSRKHPAIHCKKWADIVTDLNTQNPEYLDIRHLERGLQYRKTKKVGGNLHCIIAFQRLSWQRFGLWNFPFGTIRQESQPPTHAQGIAKSESEDNISKKQQGRLGRSFSTGFHQDSTWKKMSSIHERRNSGYHGYSDYEGND
SIO_010081: BIVM
subclass of: SO_0000673
so part of: BIVM
location: complement(join(7229653..7229946,7231711..7231807,7232754..7232837,7233462..7233594,7241308..7241402,7241621..7241725,7242258..7242353,7244739..7244865,7248543..7249017))
location: region:7229653-7249017:-1
so has part: feature:7248543-7249017:-1:exon
so has part: feature:7244739-7244865:-1:exon
so has part: feature:7242258-7242353:-1:exon
so has part: feature:7241621-7241725:-1:exon
so has part: feature:7241308-7241402:-1:exon
so has part: feature:7233462-7233594:-1:exon
so has part: feature:7232754-7232837:-1:exon
so has part: feature:7231711-7231807:-1:exon
so has part: feature:7229653-7229946:-1:exon

XP_017911865.1
type: Protein
SIO_000068: ncbiprotein

position:7229653:-1
position: 7229653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7249017:-1
position: 7249017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7248543-7249017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7244739-7244865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7242258-7242353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7241621-7241725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7241308-7241402:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7233462-7233594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7232754-7232837:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7231711-7231807:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7229653-7229946:-1:exon

BIVM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: BIVM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic immunoglobulin-like variable motif-containing protein isoform X1
translation: MPNVAEAEGADDSGNGEHKSERRSPEESLQGAVQSFCTRASGEPLGPRGDGHYPWSCPVTHTREKIYAICSDYAFLNQATSIYKTPNPARSCLSDSTSLSAANNSSRYIGISASTSDIIYNEENSLENLSNSLGKLPLAWEIDKSEFDGVTTNLKHKSGNGKKQVSKKKTSDKKGKHQREWAQYSPLEDIKQRKVLDLRRWYCISRPQYKTSCGISSLVSCWNFLYSTMGAGNLPAITQEEALHILGFQPPFEDIRFGPFTGNTTLMRWFRQINDHFHVKGCSYVLYKPHGKNKTAGETASGALSKLTHGLKDESLAYIYHCQNHYFCPIGFEATPVKANKAYSRGPLTPQEVEYWILIGESSRKHPAIHCKKWADIVTDLNTQNPEYLDIRHLERGLQYRKTKKVGGNLHCIIAFQRLSWQRFGLWNFPFGTIRQESQPPTHAQGIAKSESEDNISKKQQGRLGRSFSTGFHQDSTWKKMSSIHERRNSGYHGYSDYEGND
SIO_010081: BIVM
subclass of: SO_0000673
so part of: BIVM
location: complement(join(7229653..7229946,7231711..7231807,7232754..7232840,7233462..7233594,7241308..7241402,7241621..7241725,7242258..7242353,7244739..7244865,7248543..7249017))
location: region:7229653-7249017:-1
so has part: feature:7248543-7249017:-1:exon
so has part: feature:7244739-7244865:-1:exon
so has part: feature:7242258-7242353:-1:exon
so has part: feature:7241621-7241725:-1:exon
so has part: feature:7241308-7241402:-1:exon
so has part: feature:7233462-7233594:-1:exon
so has part: feature:7232754-7232840:-1:exon
so has part: feature:7231711-7231807:-1:exon
so has part: feature:7229653-7229946:-1:exon

XP_017911863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7248543-7249017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7244739-7244865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7242258-7242353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7241621-7241725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7241308-7241402:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7233462-7233594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7232754-7232840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7231711-7231807:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7229653-7229946:-1:exon

BIVM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: BIVM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic immunoglobulin-like variable motif-containing protein isoform X1
translation: MPNVAEAEGADDSGNGEHKSERRSPEESLQGAVQSFCTRASGEPLGPRGDGHYPWSCPVTHTREKIYAICSDYAFLNQATSIYKTPNPARSCLSDSTSLSAANNSSRYIGISASTSDIIYNEENSLENLSNSLGKLPLAWEIDKSEFDGVTTNLKHKSGNGKKQVSKKKTSDKKGKHQREWAQYSPLEDIKQRKVLDLRRWYCISRPQYKTSCGISSLVSCWNFLYSTMGAGNLPAITQEEALHILGFQPPFEDIRFGPFTGNTTLMRWFRQINDHFHVKGCSYVLYKPHGKNKTAGETASGALSKLTHGLKDESLAYIYHCQNHYFCPIGFEATPVKANKAYSRGPLTPQEVEYWILIGESSRKHPAIHCKKWADIVTDLNTQNPEYLDIRHLERGLQYRKTKKVGGNLHCIIAFQRLSWQRFGLWNFPFGTIRQESQPPTHAQGIAKSESEDNISKKQQGRLGRSFSTGFHQDSTWKKMSSIHERRNSGYHGYSDYEGND
SIO_010081: BIVM
subclass of: SO_0000673
so part of: BIVM
location: complement(join(7229653..7229946,7231711..7231807,7232754..7232840,7233462..7233594,7241308..7241402,7241621..7241725,7242258..7242353,7244739..7244865,7248543..7249017))
location: region:7229653-7249017:-1
so has part: feature:7248543-7249017:-1:exon
so has part: feature:7244739-7244865:-1:exon
so has part: feature:7242258-7242353:-1:exon
so has part: feature:7241621-7241725:-1:exon
so has part: feature:7241308-7241402:-1:exon
so has part: feature:7233462-7233594:-1:exon
so has part: feature:7232754-7232840:-1:exon
so has part: feature:7231711-7231807:-1:exon
so has part: feature:7229653-7229946:-1:exon

XP_017911864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7248543-7249017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7244739-7244865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7242258-7242353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7241621-7241725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7241308-7241402:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7233462-7233594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7232754-7232840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7231711-7231807:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7229653-7229946:-1:exon

BIVM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: BIVM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic immunoglobulin-like variable motif-containing protein isoform X3
translation: MGAGNLPAITQEEALHILGFQPPFEDIRFGPFTGNTTLMRWFRQINDHFHVKGCSYVLYKPHGKNKTAGETASGALSKLTHGLKDESLAYIYHCQNHYFCPIGFEATPVKANKAYSRGPLTPQEVEYWILIGESSRKHPAIHCKKWADIVTDLNTQNPEYLDIRHLERGLQYRKTKKVGGNLHCIIAFQRLSWQRFGLWNFPFGTIRQESQPPTHAQGIAKSESEDNISKKQQGRLGRSFSTGFHQDSTWKKMSSIHERRNSGYHGYSDYEGND
SIO_010081: BIVM
subclass of: SO_0000673
so part of: BIVM
location: complement(join(7229653..7229946,7231711..7231807,7232754..7232840,7233462..7233594,7241308..7241402,7241621..7241725,7242258..7242271))
location: region:7229653-7242271:-1
so has part: feature:7242258-7242271:-1:exon
so has part: feature:7241621-7241725:-1:exon
so has part: feature:7241308-7241402:-1:exon
so has part: feature:7233462-7233594:-1:exon
so has part: feature:7232754-7232840:-1:exon
so has part: feature:7231711-7231807:-1:exon
so has part: feature:7229653-7229946:-1:exon

XP_017911866.1
type: Protein
SIO_000068: ncbiprotein

position:7242271:-1
position: 7242271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7242258-7242271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7241621-7241725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7241308-7241402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7233462-7233594:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7232754-7232840:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7231711-7231807:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7229653-7229946:-1:exon

KDELC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: KDELC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7258187..7271348
location: region:7258187-7271348:1
so has part: feature:7258187-7271348:1:exon
subclass of: SO_0000010

102180606
type: Gene
SIO_000068: ncbigene

position:7258187:1
position: 7258187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7271348:1
position: 7271348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7258187-7271348:1:exon

KDELC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: KDELC1
product: KDEL motif containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 28 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_005687733.3
SIO_010081: KDELC1
subclass of: SO_0000673
so part of: KDELC1
location: join(7258187..7258822,7260410..7260615,7262674..7262879,7263050..7263127,7263485..7263657,7263779..7264016,7266372..7266581,7267270..7267359,7268771..7268878,7271130..7271348)
location: region:7258187-7271348:1
so has part: feature:7258187-7258822:1:exon
so has part: feature:7260410-7260615:1:exon
so has part: feature:7262674-7262879:1:exon
so has part: feature:7263050-7263127:1:exon
so has part: feature:7263485-7263657:1:exon
so has part: feature:7263779-7264016:1:exon
so has part: feature:7266372-7266581:1:exon
so has part: feature:7267270-7267359:1:exon
so has part: feature:7268771-7268878:1:exon
so has part: feature:7271130-7271348:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7258187-7258822:1:exon

position:7258822:1
position: 7258822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7260410-7260615:1:exon

position:7260410:1
position: 7260410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7260615:1
position: 7260615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7262674-7262879:1:exon

position:7262674:1
position: 7262674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7262879:1
position: 7262879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7263050-7263127:1:exon

position:7263050:1
position: 7263050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7263127:1
position: 7263127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7263485-7263657:1:exon

position:7263485:1
position: 7263485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7263657:1
position: 7263657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7263779-7264016:1:exon

position:7263779:1
position: 7263779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7264016:1
position: 7264016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7266372-7266581:1:exon

position:7266372:1
position: 7266372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7266581:1
position: 7266581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7267270-7267359:1:exon

position:7267270:1
position: 7267270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7267359:1
position: 7267359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7268771-7268878:1:exon

position:7268771:1
position: 7268771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7268878:1
position: 7268878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7271130-7271348:1:exon

position:7271130:1
position: 7271130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KDELC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: KDELC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KDEL motif-containing protein 1
translation: MFSILLLYCFFLGTVPGLAESGGERRLSPEKSEVWGPGLKAAVVLPARYFYIQAVDTSGQKFTSSPGEKVFQIKVSAPDEQFTRVGVQVLDRKDGSYIVRYRMYASYKNLKIEVKFQGQHVAKSPYILKGPVYHESCDCPLEDSAAWLREMNCPETFAQIHRDLVHFPTVDPEKIATEIPKRFGQRQSLCHYTLKDNKVYIKTHGEHVGFRIFMDAILLSLTRKVKMPDVEFFVNLGDWPLEKKKSSPHIHPIFSWCGSTDSKDIVMPTYDLTDSVLETMGRVSLDMMSVQANTGPPWESKNSTAVWRGRDSRKERLELVKLSRKHPELIDAAFTNFFFFKHDENLYGPIVKHISFFDFFKHKYQINVDGTVAAYRLPYLLVGDSVVLKQDSIYYEHFYNELQPWKHYIPIKSNLSDLLEKLQWAKDHDEEAKKIAKTGQEFARNNLMGDDIFCYYFKLFQEYASLQVSEPQIREGMMRVEPETEDDLFPCTCHRKKTKDEL
SIO_010081: KDELC1
subclass of: SO_0000673
so part of: KDELC1
location: join(7258641..7258822,7260410..7260615,7262674..7262879,7263050..7263127,7263485..7263657,7263779..7264016,7266372..7266581,7267270..7267359,7268771..7268878,7271130..7271147)
location: region:7258641-7271147:1
so has part: feature:7258641-7258822:1:exon
so has part: feature:7260410-7260615:1:exon
so has part: feature:7262674-7262879:1:exon
so has part: feature:7263050-7263127:1:exon
so has part: feature:7263485-7263657:1:exon
so has part: feature:7263779-7264016:1:exon
so has part: feature:7266372-7266581:1:exon
so has part: feature:7267270-7267359:1:exon
so has part: feature:7268771-7268878:1:exon
so has part: feature:7271130-7271147:1:exon

XP_005687790.1
type: Protein
SIO_000068: ncbiprotein

position:7258641:1
position: 7258641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7271147:1
position: 7271147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7258641-7258822:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7260410-7260615:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7262674-7262879:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7263050-7263127:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7263485-7263657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7263779-7264016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7266372-7266581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7267270-7267359:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7268771-7268878:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7271130-7271147:1:exon

TEX30
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TEX30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7272736..7279450
location: region:7272736-7279450:1
so has part: feature:7272736-7279450:1:exon
subclass of: SO_0000010

102180326
type: Gene
SIO_000068: ncbigene

position:7272736:1
position: 7272736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7279450:1
position: 7279450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7272736-7279450:1:exon

TEX30
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TEX30
product: testis expressed 30, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 31 ESTs, 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_018056378.1
SIO_010081: TEX30
subclass of: SO_0000673
so part of: TEX30
location: join(7272736..7272873,7275899..7275972,7276456..7276686,7277569..7277620,7278129..7278334,7278982..7279450)
location: region:7272736-7279450:1
so has part: feature:7272736-7272873:1:exon
so has part: feature:7275899-7275972:1:exon
so has part: feature:7276456-7276686:1:exon
so has part: feature:7277569-7277620:1:exon
so has part: feature:7278129-7278334:1:exon
so has part: feature:7278982-7279450:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7272736-7272873:1:exon

position:7272873:1
position: 7272873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7275899-7275972:1:exon

position:7275899:1
position: 7275899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7275972:1
position: 7275972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7276456-7276686:1:exon

position:7276456:1
position: 7276456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7276686:1
position: 7276686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7277569-7277620:1:exon

position:7277569:1
position: 7277569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7277620:1
position: 7277620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7278129-7278334:1:exon

position:7278129:1
position: 7278129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7278334:1
position: 7278334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7278982-7279450:1:exon

position:7278982:1
position: 7278982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TEX30
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TEX30
product: testis expressed 30, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018056379.1
SIO_010081: TEX30
subclass of: SO_0000673
so part of: TEX30
location: join(7272736..7272873,7275899..7275972,7276456..7276686,7277569..7277620,7278982..7279447)
location: region:7272736-7279447:1
so has part: feature:7272736-7272873:1:exon
so has part: feature:7275899-7275972:1:exon
so has part: feature:7276456-7276686:1:exon
so has part: feature:7277569-7277620:1:exon
so has part: feature:7278982-7279447:1:exon

position:7279447:1
position: 7279447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7272736-7272873:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7275899-7275972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7276456-7276686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7277569-7277620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7278982-7279447:1:exon

TEX30
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TEX30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed sequence 30 protein isoform X1
translation: MSHTEVKLKIPFGNKLLDAVCLVPNKSLTYGVILTHGASGDMNLPHLTSLASHLASHGFFCLRFTCKGLNIVHRIKAYKSVLNYLKTSGEYKLAGVFLGGRSMGSRAAASVLCHIEPDDADDFVRGLICISYPLHHPKQQHKLRDEDLFRIKDPVLFVSGSADEMCEKNLLEKVAQKMQAPHKIHWIEKANHSMAVKGRSTNDVFKEINTQILFWIQEITETDKK
SIO_010081: TEX30
subclass of: SO_0000673
so part of: TEX30
location: join(7275958..7275972,7276456..7276686,7277569..7277620,7278129..7278334,7278982..7279155)
location: region:7275958-7279155:1
so has part: feature:7275958-7275972:1:exon
so has part: feature:7276456-7276686:1:exon
so has part: feature:7277569-7277620:1:exon
so has part: feature:7278129-7278334:1:exon
so has part: feature:7278982-7279155:1:exon

XP_017911867.1
type: Protein
SIO_000068: ncbiprotein

position:7275958:1
position: 7275958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7279155:1
position: 7279155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7275958-7275972:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7276456-7276686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7277569-7277620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7278129-7278334:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7278982-7279155:1:exon

TEX30
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TEX30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed sequence 30 protein isoform X2
translation: MSHTEVKLKIPFGNKLLDAVCLVPNKSLTYGVILTHGASGDMNLPHLTSLASHLASHGFFCLRFTCKGLNIVHRIKAYKSVLNYLKTSGEYKLAGVFLGELVGESGTENASSS
SIO_010081: TEX30
subclass of: SO_0000673
so part of: TEX30
location: join(7275958..7275972,7276456..7276686,7277569..7277620,7278982..7279025)
location: region:7275958-7279025:1
so has part: feature:7275958-7275972:1:exon
so has part: feature:7276456-7276686:1:exon
so has part: feature:7277569-7277620:1:exon
so has part: feature:7278982-7279025:1:exon

XP_017911868.1
type: Protein
SIO_000068: ncbiprotein

position:7279025:1
position: 7279025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7275958-7275972:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7276456-7276686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7277569-7277620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7278982-7279025:1:exon

CCDC168
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CCDC168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7284574..7320194
location: region:7284574-7320194:1
so has part: feature:7284574-7320194:1:exon
subclass of: SO_0000010

102169394
type: Gene
SIO_000068: ncbigene

position:7284574:1
position: 7284574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7320194:1
position: 7320194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7284574-7320194:1:exon

CCDC168
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CCDC168
product: coiled-coil domain containing 168
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_018056289.1
SIO_010081: CCDC168
subclass of: SO_0000673
so part of: CCDC168
location: join(7284574..7284807,7285135..7285168,7290967..7291042,7294888..7316138,7317612..7319361,7319467..7320194)
location: region:7284574-7320194:1
so has part: feature:7284574-7284807:1:exon
so has part: feature:7285135-7285168:1:exon
so has part: feature:7290967-7291042:1:exon
so has part: feature:7294888-7316138:1:exon
so has part: feature:7317612-7319361:1:exon
so has part: feature:7319467-7320194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7284574-7284807:1:exon

position:7284807:1
position: 7284807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7285135-7285168:1:exon

position:7285135:1
position: 7285135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7285168:1
position: 7285168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7290967-7291042:1:exon

position:7290967:1
position: 7290967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7291042:1
position: 7291042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7294888-7316138:1:exon

position:7294888:1
position: 7294888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7316138:1
position: 7316138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7317612-7319361:1:exon

position:7317612:1
position: 7317612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7319361:1
position: 7319361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7319467-7320194:1:exon

position:7319467:1
position: 7319467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC168
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CCDC168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 168
translation: MSKQFYFFKKVVQGGLGNDTFLTLWELLESWTSQNNWMAIFFIIFLGIIFEIILLKICMSFQKKPELPSEKDKSDIHKIIGQLFHPQKQGDTYTSLGGVENVFMEKVILELNFKRVDNYSERTNASSVTSEGNEEYFEDSVPPPDEPPRESTSESRFRVSHFSESHMTSSNGTSSSSLSLFHSEVQEILLRCSGCPKNERETIQFSSKKLFSIMKSNRSKNRTFSSDFNFSRTSRIIIESEDLDVAPCPPAHLFLSRDQVRLLEENVRNQSPPKSKATLENKTTTSLSSTSLEPLIQNQHSATKDLSPQAQASFSRQKATQNQGFSKAQFIGQAHQFFNNQSSVNRQPESEARYFALPQDLVRESLTSRTQDSFQTADMDGCQHLVQIPQSAETQDPVKGLGSDTKHSDEAQDSVWSEESNKIKYSIPGQDTILKDARHLVLPPSPNSVDKVMPQQEHVKSEGQKQIASSTLNESPSYGSLPLMTRQKKRRKTSHSNSELSLKDLPQKSKKTPVSQILQTTACHTSECSQLRYEHKTKKKELHQRKGVSGIALHFTYAFKLVPPYIRKYYRKRQAKFTPRLTECRDFLPKPDQSLCAEKVNYIGSVEEEGTRGSTENEEQHGRNNKEPENISQEIPSQLEQSFMVNTYQQKVPCPSLIETNRMNKESLEDPKEMDIGESCAPNSETTSDLPVARQETSLEEAISEPLQKCVSSPQMESDRNMKTWEDLRGSENSNPALSSREELPMNISEMQRCFSQGNTDRKDLLEIVLESSDVNLFIPLGTEKHKSSGQPAVVEIQERPEDVTEKEKNALRVHVMENDISGSEELECNTRSNINNMQEERISPAFHEATHTALSLPPRMKMQSGLKTKMDTSEIGLSFSAVKPDELPDDRKIYFSFEKNCLVKKPQEDNREEEQQAPQEAALQLTPGFRFSLRLQQKPTYVQLEPGQNSSKGRTTQNKDLGVYPQTLSTETTVETNPHPMMDPFQVEVKQSTDRPTGRETADPVHPLTMSESLPILTESTECGVPLGGSPEKFLDAQTAEVKQDLEGVLPEVALGSFHRHMPPLSNLKRKKIRKKKSGTTNVLGFKCVITKVKKPPKCHRRRLRSNFKIMIKLILQDKSMADMLLNVTDPCLSILPHVRMHSRLNIGNHGHTELKQETSEAEREEDYLDIINKGSDSGNTVEAARLQEEVSGDQEASPEAVLEDRWNLRLDEDPEKELKSMKEMQQPITFAEVTAESIHMATTGPVHVENMEKSLIAPTDLRCTEDDSEISAPTSEKSLIGDPLNQTRESDVPDDGSDTRETGYCFAAMKAERPKDLPAMFPKTFNCHMPVLSHSKVKKTRVRFSHIECRVNSKSVPMKALKPSISQMCDITGHQRKKLESDFKAKLKKIGQANGLEYEFLNTLYSPVHSRLPGAIKSFSHVQPKLRGLAVEDRPLYVDFFDERNALCDRDEKGQDVEEKEQKTLLITAPQHTQYLWINGCRGKETHLAEPDAGLHRLTQEQDTQHQTCFKQAALQTDVQMGPREAKELLKTKKPEDDLTAPAGLEVLPPEAGNSTPVKLLNIPTECGVASGGNLTRERGSYSVDKNSALPESLQVTFLQSSDSVDTFVSKSQRKKNTLKLATKQTTVSRRYRAMREQNLYTLCMLPDRQRNALQCNFQMKGLQQNKNTGDMCSPVILSRVPVWPNTKMSIGLNVETDTQRITRLDHTQMQEKSPNERKVCCPASVDMSTLPNSVKDRKEKGAGEQDLPIPESGQGFIFSTYQEQDHDLIKSDEGQKQIGSINIHVQPQTHFAESILSSASCPTLDPFQPRKLESNARFFPPTSGEAKFDEKIFSAREGGVPSEANHQKEQAGGTEKEEKVTLDFCMAALSLSKGKRNFKQYSDMKILMNPKYGILKAKKPPISHMLNIKGGARRNRRKELRYNLSTKMGQVGQGTKMAEGRDSLLNIISAINRYSDREGEKDMLGEKRLSSEQVMQNIPPHEGNMTPDHPKEGDLQD…
SIO_010081: CCDC168
subclass of: SO_0000673
so part of: CCDC168
location: join(7284574..7284807,7285135..7285168,7290967..7291042,7294888..7316138,7317612..7319361,7319467..7320109)
location: region:7284574-7320109:1
so has part: feature:7284574-7284807:1:exon
so has part: feature:7285135-7285168:1:exon
so has part: feature:7290967-7291042:1:exon
so has part: feature:7294888-7316138:1:exon
so has part: feature:7317612-7319361:1:exon
so has part: feature:7319467-7320109:1:exon

XP_017911778.1
type: Protein
SIO_000068: ncbiprotein

position:7320109:1
position: 7320109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7284574-7284807:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7285135-7285168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7290967-7291042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7294888-7316138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7317612-7319361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7319467-7320109:1:exon

METTL21C
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: METTL21C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7354584..7363817
location: region:7354584-7363817:1
so has part: feature:7354584-7363817:1:exon
subclass of: SO_0000010

102180054
type: Gene
SIO_000068: ncbigene

position:7354584:1
position: 7354584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7363817:1
position: 7363817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7354584-7363817:1:exon

METTL21C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: METTL21C
product: methyltransferase like 21C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005687731.3
SIO_010081: METTL21C
subclass of: SO_0000673
so part of: METTL21C
location: join(7354584..7355227,7359274..7359425,7361585..7361702,7363161..7363817)
location: region:7354584-7363817:1
so has part: feature:7354584-7355227:1:exon
so has part: feature:7359274-7359425:1:exon
so has part: feature:7361585-7361702:1:exon
so has part: feature:7363161-7363817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7354584-7355227:1:exon

position:7355227:1
position: 7355227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7359274-7359425:1:exon

position:7359274:1
position: 7359274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7359425:1
position: 7359425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7361585-7361702:1:exon

position:7361585:1
position: 7361585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7361702:1
position: 7361702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7363161-7363817:1:exon

position:7363161:1
position: 7363161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

METTL21C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: METTL21C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-lysine methyltransferase METTL21C
translation: MLPGLLPLCSAAPGWQLWVAAFLVQGTKLKSRCSFRLSRCKGDKLHLSEALGNSDPAELLDPAGSLLPSGPVMDACLSSEQQPRPLEEAPSTPDDETLHTDDTSRCPGDSNEIEASLRSLQKFVPTNYPSYTQENYQFVGKKIVIQESIESYGAVVWPGAVALCQYLEEHTEELNLRGAKILEIGAGPGLVSIVASILGAQVTATDLPDVLGNLQYNLLKNTLNCTTYLPEVKELVWGEGLEQSFPKSTLYYDYVLASDVVYHHYFLDKLLATMVYLCQPGTVLLWANKFRFSTDYEFLDKFKQVFDTTLLAESQESSIKLFKGILKWD
SIO_010081: METTL21C
subclass of: SO_0000673
so part of: METTL21C
location: join(7354903..7355227,7359274..7359425,7361585..7361702,7363161..7363555)
location: region:7354903-7363555:1
so has part: feature:7354903-7355227:1:exon
so has part: feature:7359274-7359425:1:exon
so has part: feature:7361585-7361702:1:exon
so has part: feature:7363161-7363555:1:exon

XP_005687788.2
type: Protein
SIO_000068: ncbiprotein

position:7354903:1
position: 7354903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7363555:1
position: 7363555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7354903-7355227:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7359274-7359425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7361585-7361702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7363161-7363555:1:exon

TPP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7368209..7427027)
location: region:7368209-7427027:-1
so has part: feature:7368209-7427027:-1:exon
subclass of: SO_0000010

102169112
type: Gene
SIO_000068: ncbigene

position:7368209:-1
position: 7368209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7427027:-1
position: 7427027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7368209-7427027:-1:exon

TPP2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9925
gene: TPP2
product: tripeptidyl peptidase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_001918923.1
SIO_010081: TPP2
so part of: TPP2
location: complement(join(7368209..7369148,7371404..7371523,7373202..7373409,7376583..7376724,7377719..7377815,7378904..7379055,7384925..7384963,7386830..7386908,7387163..7387407,7388685..7388822,7389659..7389755,7390335..7390435,7390675..7390791,7393478..7393632,7394333..7394439,7396341..7396417,7396707..7396864,7397558..7397726,7398221..7398336,7400037..7400185,7400451..7400550,7403005..7403132,7405341..7405417,7406083..7406237,7407957..7408120,7408801..7408925,7411910..7412014,7413588..7413683,7419341..7419469,7426650..7427027))
location: region:7368209-7427027:-1
so has part: feature:7426650-7427027:-1:exon
so has part: feature:7419341-7419469:-1:exon
so has part: feature:7413588-7413683:-1:exon
so has part: feature:7411910-7412014:-1:exon
so has part: feature:7408801-7408925:-1:exon
so has part: feature:7407957-7408120:-1:exon
so has part: feature:7406083-7406237:-1:exon
so has part: feature:7405341-7405417:-1:exon
so has part: feature:7403005-7403132:-1:exon
so has part: feature:7400451-7400550:-1:exon
so has part: feature:7400037-7400185:-1:exon
so has part: feature:7398221-7398336:-1:exon
so has part: feature:7397558-7397726:-1:exon
so has part: feature:7396707-7396864:-1:exon
so has part: feature:7396341-7396417:-1:exon
so has part: feature:7394333-7394439:-1:exon
so has part: feature:7393478-7393632:-1:exon
so has part: feature:7390675-7390791:-1:exon
so has part: feature:7390335-7390435:-1:exon
so has part: feature:7389659-7389755:-1:exon
so has part: feature:7388685-7388822:-1:exon
so has part: feature:7387163-7387407:-1:exon
so has part: feature:7386830-7386908:-1:exon
so has part: feature:7384925-7384963:-1:exon
so has part: feature:7378904-7379055:-1:exon
so has part: feature:7377719-7377815:-1:exon
so has part: feature:7376583-7376724:-1:exon
so has part: feature:7373202-7373409:-1:exon
so has part: feature:7371404-7371523:-1:exon
so has part: feature:7368209-7369148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7426650-7427027:-1:exon

position:7426650:-1
position: 7426650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7419341-7419469:-1:exon

position:7419341:-1
position: 7419341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7419469:-1
position: 7419469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7413588-7413683:-1:exon

position:7413588:-1
position: 7413588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7413683:-1
position: 7413683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7411910-7412014:-1:exon

position:7411910:-1
position: 7411910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7412014:-1
position: 7412014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7408801-7408925:-1:exon

position:7408801:-1
position: 7408801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7408925:-1
position: 7408925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7407957-7408120:-1:exon

position:7407957:-1
position: 7407957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7408120:-1
position: 7408120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7406083-7406237:-1:exon

position:7406083:-1
position: 7406083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7406237:-1
position: 7406237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7405341-7405417:-1:exon

position:7405341:-1
position: 7405341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7405417:-1
position: 7405417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7403005-7403132:-1:exon

position:7403005:-1
position: 7403005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7403132:-1
position: 7403132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7400451-7400550:-1:exon

position:7400451:-1
position: 7400451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7400550:-1
position: 7400550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7400037-7400185:-1:exon

position:7400037:-1
position: 7400037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7400185:-1
position: 7400185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7398221-7398336:-1:exon

position:7398221:-1
position: 7398221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7398336:-1
position: 7398336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7397558-7397726:-1:exon

position:7397558:-1
position: 7397558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7397726:-1
position: 7397726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7396707-7396864:-1:exon

position:7396707:-1
position: 7396707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7396864:-1
position: 7396864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7396341-7396417:-1:exon

position:7396341:-1
position: 7396341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7396417:-1
position: 7396417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7394333-7394439:-1:exon

position:7394333:-1
position: 7394333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7394439:-1
position: 7394439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7393478-7393632:-1:exon

position:7393478:-1
position: 7393478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7393632:-1
position: 7393632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7390675-7390791:-1:exon

position:7390675:-1
position: 7390675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7390791:-1
position: 7390791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7390335-7390435:-1:exon

position:7390335:-1
position: 7390335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7390435:-1
position: 7390435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7389659-7389755:-1:exon

position:7389659:-1
position: 7389659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7389755:-1
position: 7389755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7388685-7388822:-1:exon

position:7388685:-1
position: 7388685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7388822:-1
position: 7388822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7387163-7387407:-1:exon

position:7387163:-1
position: 7387163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7387407:-1
position: 7387407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7386830-7386908:-1:exon

position:7386830:-1
position: 7386830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7386908:-1
position: 7386908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7384925-7384963:-1:exon

position:7384925:-1
position: 7384925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7384963:-1
position: 7384963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7378904-7379055:-1:exon

position:7378904:-1
position: 7378904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7379055:-1
position: 7379055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7377719-7377815:-1:exon

position:7377719:-1
position: 7377719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7377815:-1
position: 7377815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7376583-7376724:-1:exon

position:7376583:-1
position: 7376583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7376724:-1
position: 7376724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7373202-7373409:-1:exon

position:7373202:-1
position: 7373202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7373409:-1
position: 7373409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:7371404-7371523:-1:exon

position:7371404:-1
position: 7371404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7371523:-1
position: 7371523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:7368209-7369148:-1:exon

position:7369148:-1
position: 7369148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TPP2
product: tripeptidyl peptidase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 50 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_018056380.1
SIO_010081: TPP2
subclass of: SO_0000673
so part of: TPP2
location: complement(join(7368209..7369148,7371404..7371523,7373202..7373409,7376594..7376724,7377719..7377815,7378904..7379055,7384925..7384963,7386830..7386908,7387163..7387407,7388685..7388822,7389659..7389755,7390335..7390435,7390675..7390791,7393478..7393632,7394333..7394439,7396341..7396417,7396707..7396864,7397558..7397726,7398221..7398336,7400037..7400185,7400451..7400550,7403005..7403132,7405341..7405417,7406083..7406237,7407957..7408120,7408801..7408925,7411910..7412014,7413588..7413683,7419341..7419469,7426650..7427021))
location: region:7368209-7427021:-1
so has part: feature:7426650-7427021:-1:exon
so has part: feature:7419341-7419469:-1:exon
so has part: feature:7413588-7413683:-1:exon
so has part: feature:7411910-7412014:-1:exon
so has part: feature:7408801-7408925:-1:exon
so has part: feature:7407957-7408120:-1:exon
so has part: feature:7406083-7406237:-1:exon
so has part: feature:7405341-7405417:-1:exon
so has part: feature:7403005-7403132:-1:exon
so has part: feature:7400451-7400550:-1:exon
so has part: feature:7400037-7400185:-1:exon
so has part: feature:7398221-7398336:-1:exon
so has part: feature:7397558-7397726:-1:exon
so has part: feature:7396707-7396864:-1:exon
so has part: feature:7396341-7396417:-1:exon
so has part: feature:7394333-7394439:-1:exon
so has part: feature:7393478-7393632:-1:exon
so has part: feature:7390675-7390791:-1:exon
so has part: feature:7390335-7390435:-1:exon
so has part: feature:7389659-7389755:-1:exon
so has part: feature:7388685-7388822:-1:exon
so has part: feature:7387163-7387407:-1:exon
so has part: feature:7386830-7386908:-1:exon
so has part: feature:7384925-7384963:-1:exon
so has part: feature:7378904-7379055:-1:exon
so has part: feature:7377719-7377815:-1:exon
so has part: feature:7376594-7376724:-1:exon
so has part: feature:7373202-7373409:-1:exon
so has part: feature:7371404-7371523:-1:exon
so has part: feature:7368209-7369148:-1:exon

position:7427021:-1
position: 7427021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7426650-7427021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7419341-7419469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7413588-7413683:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7411910-7412014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7408801-7408925:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7407957-7408120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7406083-7406237:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7405341-7405417:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7403005-7403132:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7400451-7400550:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7400037-7400185:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7398221-7398336:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7397558-7397726:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7396707-7396864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7396341-7396417:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7394333-7394439:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7393478-7393632:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7390675-7390791:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7390335-7390435:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7389659-7389755:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7388685-7388822:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7387163-7387407:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7386830-7386908:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7384925-7384963:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7378904-7379055:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7377719-7377815:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7376594-7376724:-1:exon

position:7376594:-1
position: 7376594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7373202-7373409:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7371404-7371523:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7368209-7369148:-1:exon

TPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TPP2
product: tripeptidyl peptidase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 57 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_018056381.1
SIO_010081: TPP2
subclass of: SO_0000673
so part of: TPP2
location: complement(join(7368215..7369148,7371404..7371523,7373202..7373409,7376594..7376724,7377719..7377815,7378904..7379055,7386830..7386908,7387163..7387407,7388685..7388822,7389659..7389755,7390335..7390435,7390675..7390791,7393478..7393632,7394333..7394439,7396341..7396417,7396707..7396864,7397558..7397726,7398221..7398336,7400037..7400185,7400451..7400550,7403005..7403132,7405341..7405417,7406083..7406237,7407957..7408120,7408801..7408925,7411910..7412014,7413588..7413683,7419341..7419469,7426650..7426916))
location: region:7368215-7426916:-1
so has part: feature:7426650-7426916:-1:exon
so has part: feature:7419341-7419469:-1:exon
so has part: feature:7413588-7413683:-1:exon
so has part: feature:7411910-7412014:-1:exon
so has part: feature:7408801-7408925:-1:exon
so has part: feature:7407957-7408120:-1:exon
so has part: feature:7406083-7406237:-1:exon
so has part: feature:7405341-7405417:-1:exon
so has part: feature:7403005-7403132:-1:exon
so has part: feature:7400451-7400550:-1:exon
so has part: feature:7400037-7400185:-1:exon
so has part: feature:7398221-7398336:-1:exon
so has part: feature:7397558-7397726:-1:exon
so has part: feature:7396707-7396864:-1:exon
so has part: feature:7396341-7396417:-1:exon
so has part: feature:7394333-7394439:-1:exon
so has part: feature:7393478-7393632:-1:exon
so has part: feature:7390675-7390791:-1:exon
so has part: feature:7390335-7390435:-1:exon
so has part: feature:7389659-7389755:-1:exon
so has part: feature:7388685-7388822:-1:exon
so has part: feature:7387163-7387407:-1:exon
so has part: feature:7386830-7386908:-1:exon
so has part: feature:7378904-7379055:-1:exon
so has part: feature:7377719-7377815:-1:exon
so has part: feature:7376594-7376724:-1:exon
so has part: feature:7373202-7373409:-1:exon
so has part: feature:7371404-7371523:-1:exon
so has part: feature:7368215-7369148:-1:exon

position:7368215:-1
position: 7368215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7426916:-1
position: 7426916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7426650-7426916:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7419341-7419469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7413588-7413683:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7411910-7412014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7408801-7408925:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7407957-7408120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7406083-7406237:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7405341-7405417:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7403005-7403132:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7400451-7400550:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7400037-7400185:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7398221-7398336:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7397558-7397726:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7396707-7396864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7396341-7396417:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7394333-7394439:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7393478-7393632:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7390675-7390791:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7390335-7390435:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7389659-7389755:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7388685-7388822:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7387163-7387407:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7386830-7386908:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7378904-7379055:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7377719-7377815:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7376594-7376724:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7373202-7373409:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7371404-7371523:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7368215-7369148:-1:exon

TPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripeptidyl-peptidase 2 isoform X2
translation: MATAATEEPFPFHGLLPKKETGAAAFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDGKPKIVDIIDTTGSGDVNTATVVEPKDGEIVGLSGRVLKIPVTWTNPSGRYHIGIKNGYDFYPKALKERIQKERKEKIWDPVHRVALAEACRKQEEFDVANNCPSQANKLIKEELQSQVELLNSFEKKYSDPGPVYDCLVWFDGETWRACIDSSEDGDLSKSTVLRNYKEAQEYGSFGAAEMLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTRLSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVISEAVWKHNIIYVSSAGNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGALGVSVSAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALVLSGLKANDVNYTVHSVRRALENTAVKADNIEVFAQGHGIIQVDKAYDYLVQNTSFANKLGFTVTVGTNRGIYLRDPVQVAAPSDHGVGIEPVFPENTENSEKISLQLHLALTSNSSWVQCPSHLELMNQCRHINIRVDPRGLREGLHYTEVCGYDIASPSAGPLFRVPITAVIAAKVNESTQYDLALTDVHFKPGQIRRHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRAYRSHEFYKFCSLPEKGTLTEAFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLKYEDLAPCITLKSWVQTLRPLSAKTKPLGSRDVLPNNRQLYEMILTYNFHQPKSGEVTPSCPLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDLERLKDLPFIVSHRLSNTLSLDIHENHSLALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIPKGAGPGCYLAGSLTLSKTELGKKADVIPVHYYLISPPTKTKNGSKDKEKDSEKEKDLKEEFTEALRDLKIQWMTKLDSSDIYNELKETYPNYLPLYVARLHQLDAEKERMKRLNEIVEAANAVISHIDQTALAVYIAMKTDPRPDAAIIKNDMDKQKSTLVDALCRKGCALADHLLQAQDQDGAVSSDSEGREEEGESTLDSLTETFWETTKWTDLFDNKVLTFAYKHALVNKMYGRGLKFATKLVEEKPTKENWKNCIQLMKLLGWTHCASFTENWLPIMYPPDYCVF
SIO_010081: TPP2
subclass of: SO_0000673
so part of: TPP2
location: complement(join(7369059..7369148,7371404..7371523,7373202..7373409,7376594..7376724,7377719..7377815,7378904..7379055,7386830..7386908,7387163..7387407,7388685..7388822,7389659..7389755,7390335..7390435,7390675..7390791,7393478..7393632,7394333..7394439,7396341..7396417,7396707..7396864,7397558..7397726,7398221..7398336,7400037..7400185,7400451..7400550,7403005..7403132,7405341..7405417,7406083..7406237,7407957..7408120,7408801..7408925,7411910..7412014,7413588..7413683,7419341..7419469,7426650..7426814))
location: region:7369059-7426814:-1
so has part: feature:7426650-7426814:-1:exon
so has part: feature:7419341-7419469:-1:exon
so has part: feature:7413588-7413683:-1:exon
so has part: feature:7411910-7412014:-1:exon
so has part: feature:7408801-7408925:-1:exon
so has part: feature:7407957-7408120:-1:exon
so has part: feature:7406083-7406237:-1:exon
so has part: feature:7405341-7405417:-1:exon
so has part: feature:7403005-7403132:-1:exon
so has part: feature:7400451-7400550:-1:exon
so has part: feature:7400037-7400185:-1:exon
so has part: feature:7398221-7398336:-1:exon
so has part: feature:7397558-7397726:-1:exon
so has part: feature:7396707-7396864:-1:exon
so has part: feature:7396341-7396417:-1:exon
so has part: feature:7394333-7394439:-1:exon
so has part: feature:7393478-7393632:-1:exon
so has part: feature:7390675-7390791:-1:exon
so has part: feature:7390335-7390435:-1:exon
so has part: feature:7389659-7389755:-1:exon
so has part: feature:7388685-7388822:-1:exon
so has part: feature:7387163-7387407:-1:exon
so has part: feature:7386830-7386908:-1:exon
so has part: feature:7378904-7379055:-1:exon
so has part: feature:7377719-7377815:-1:exon
so has part: feature:7376594-7376724:-1:exon
so has part: feature:7373202-7373409:-1:exon
so has part: feature:7371404-7371523:-1:exon
so has part: feature:7369059-7369148:-1:exon

XP_017911870.1
type: Protein
SIO_000068: ncbiprotein

position:7369059:-1
position: 7369059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7426814:-1
position: 7426814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7426650-7426814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7419341-7419469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7413588-7413683:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7411910-7412014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7408801-7408925:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7407957-7408120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7406083-7406237:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7405341-7405417:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7403005-7403132:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7400451-7400550:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7400037-7400185:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7398221-7398336:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7397558-7397726:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7396707-7396864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7396341-7396417:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7394333-7394439:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7393478-7393632:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7390675-7390791:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7390335-7390435:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7389659-7389755:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7388685-7388822:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7387163-7387407:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7386830-7386908:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7378904-7379055:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7377719-7377815:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7376594-7376724:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7373202-7373409:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7371404-7371523:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7369059-7369148:-1:exon

TPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripeptidyl-peptidase 2 isoform X1
translation: MATAATEEPFPFHGLLPKKETGAAAFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDGKPKIVDIIDTTGSGDVNTATVVEPKDGEIVGLSGRVLKIPVTWTNPSGRYHIGIKNGYDFYPKALKERIQKERKEKIWDPVHRVALAEACRKQEEFDVANNCPSQANKLIKEELQSQVELLNSFEKKYSDPGPVYDCLVWFDGETWRACIDSSEDGDLSKSTVLRNYKEAQEYGSFGAAEMLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTRLSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVISEAVWKHNIIYVSSAGNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGALGVSVSAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALVLSGLKANDVNYTVHSVRRALENTAVKADNIEVFAQGHGIIQVDKAYDYLVQNTSFANKLGFTVTVGTNRGIYLRDPVQVAAPSDHGVGIEPVFPENTENSEKISLQLHLALTSNSSWVQCPSHLELMNQCRHINIRVDPRGLREGLHYTEVCGYDIASPSAGPLFRVPITAVIAAKVNESTQYDLALTDVHFKPGQIRRHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRAYRSHEFYKFCSLPEKGTLTEAFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLKYEDLAPCITLKSWVQTLRPLSAKTKPLGSRDVLPNNRQLYEMILTYNFHQPKSGEVTPSCPLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDLERLKDLPFIVSHRLSNTLSLDIHENHSLALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIPKGAGPGCYLAGSLTLSKTELGKKAGQSAAKRQGKFKKDVIPVHYYLISPPTKTKNGSKDKEKDSEKEKDLKEEFTEALRDLKIQWMTKLDSSDIYNELKETYPNYLPLYVARLHQLDAEKERMKRLNEIVEAANAVISHIDQTALAVYIAMKTDPRPDAAIIKNDMDKQKSTLVDALCRKGCALADHLLQAQDQDGAVSSDSEGREEEGESTLDSLTETFWETTKWTDLFDNKVLTFAYKHALVNKMYGRGLKFATKLVEEKPTKENWKNCIQLMKLLGWTHCASFTENWLPIMYPPDYCVF
SIO_010081: TPP2
subclass of: SO_0000673
so part of: TPP2
location: complement(join(7369059..7369148,7371404..7371523,7373202..7373409,7376594..7376724,7377719..7377815,7378904..7379055,7384925..7384963,7386830..7386908,7387163..7387407,7388685..7388822,7389659..7389755,7390335..7390435,7390675..7390791,7393478..7393632,7394333..7394439,7396341..7396417,7396707..7396864,7397558..7397726,7398221..7398336,7400037..7400185,7400451..7400550,7403005..7403132,7405341..7405417,7406083..7406237,7407957..7408120,7408801..7408925,7411910..7412014,7413588..7413683,7419341..7419469,7426650..7426814))
location: region:7369059-7426814:-1
so has part: feature:7426650-7426814:-1:exon
so has part: feature:7419341-7419469:-1:exon
so has part: feature:7413588-7413683:-1:exon
so has part: feature:7411910-7412014:-1:exon
so has part: feature:7408801-7408925:-1:exon
so has part: feature:7407957-7408120:-1:exon
so has part: feature:7406083-7406237:-1:exon
so has part: feature:7405341-7405417:-1:exon
so has part: feature:7403005-7403132:-1:exon
so has part: feature:7400451-7400550:-1:exon
so has part: feature:7400037-7400185:-1:exon
so has part: feature:7398221-7398336:-1:exon
so has part: feature:7397558-7397726:-1:exon
so has part: feature:7396707-7396864:-1:exon
so has part: feature:7396341-7396417:-1:exon
so has part: feature:7394333-7394439:-1:exon
so has part: feature:7393478-7393632:-1:exon
so has part: feature:7390675-7390791:-1:exon
so has part: feature:7390335-7390435:-1:exon
so has part: feature:7389659-7389755:-1:exon
so has part: feature:7388685-7388822:-1:exon
so has part: feature:7387163-7387407:-1:exon
so has part: feature:7386830-7386908:-1:exon
so has part: feature:7384925-7384963:-1:exon
so has part: feature:7378904-7379055:-1:exon
so has part: feature:7377719-7377815:-1:exon
so has part: feature:7376594-7376724:-1:exon
so has part: feature:7373202-7373409:-1:exon
so has part: feature:7371404-7371523:-1:exon
so has part: feature:7369059-7369148:-1:exon

XP_017911869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7426650-7426814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7419341-7419469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7413588-7413683:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7411910-7412014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7408801-7408925:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7407957-7408120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7406083-7406237:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7405341-7405417:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7403005-7403132:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7400451-7400550:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7400037-7400185:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7398221-7398336:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7397558-7397726:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7396707-7396864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7396341-7396417:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7394333-7394439:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7393478-7393632:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7390675-7390791:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7390335-7390435:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7389659-7389755:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7388685-7388822:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7387163-7387407:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7386830-7386908:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7384925-7384963:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7378904-7379055:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7377719-7377815:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7376594-7376724:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7373202-7373409:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7371404-7371523:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7369059-7369148:-1:exon

FGF14
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: FGF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7520709..8168108
location: region:7520709-8168108:1
so has part: feature:7520709-8168108:1:exon
subclass of: SO_0000010

102179782
type: Gene
SIO_000068: ncbigene

position:7520709:1
position: 7520709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8168108:1
position: 8168108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7520709-8168108:1:exon

FGF14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FGF14
product: fibroblast growth factor 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 11 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005687730.3
SIO_010081: FGF14
subclass of: SO_0000673
so part of: FGF14
location: join(7520709..7521334,8048846..8048956,8055829..8055932,8164324..8164522,8166030..8168108)
location: region:7520709-8168108:1
so has part: feature:7520709-7521334:1:exon
so has part: feature:8048846-8048956:1:exon
so has part: feature:8055829-8055932:1:exon
so has part: feature:8164324-8164522:1:exon
so has part: feature:8166030-8168108:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7520709-7521334:1:exon

position:7521334:1
position: 7521334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8048846-8048956:1:exon

position:8048846:1
position: 8048846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8048956:1
position: 8048956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8055829-8055932:1:exon

position:8055829:1
position: 8055829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8055932:1
position: 8055932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8164324-8164522:1:exon

position:8164324:1
position: 8164324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8164522:1
position: 8164522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8166030-8168108:1:exon

position:8166030:1
position: 8166030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FGF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 14 isoform X1
translation: MVKPVPLFRRTDFKLLLCNHKDLFFLRVSKLLDCFSPKSMWFLWNIFSKGTHMLQCLCGKSLKKNKNPTDPQLKGIVTRLYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVKTGLYVAMNGEGYLYPSELFTPECKFKESVFENYYVIYSSMLYRQQESGRAWFLGLNKEGQVMKGNRVKKTKPAAHFLPKPLEVAMYREPSLHDVGETVPKAGVTPSKSTSASAIMNGGKPVNKSKTT
SIO_010081: FGF14
subclass of: SO_0000673
so part of: FGF14
location: join(7521127..7521334,8048846..8048956,8055829..8055932,8164324..8164522,8166030..8166166)
location: region:7521127-8166166:1
so has part: feature:7521127-7521334:1:exon
so has part: feature:8048846-8048956:1:exon
so has part: feature:8055829-8055932:1:exon
so has part: feature:8164324-8164522:1:exon
so has part: feature:8166030-8166166:1:exon

XP_005687787.1
type: Protein
SIO_000068: ncbiprotein

position:7521127:1
position: 7521127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8166166:1
position: 8166166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7521127-7521334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8048846-8048956:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8055829-8055932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8164324-8164522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8166030-8166166:1:exon

FGF14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: FGF14
product: fibroblast growth factor 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 11 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018056383.1
SIO_010081: FGF14
subclass of: SO_0000673
so part of: FGF14
location: join(8003031..8003471,8048846..8048956,8055829..8055932,8164324..8164522,8166030..8168108)
location: region:8003031-8168108:1
so has part: feature:8003031-8003471:1:exon
so has part: feature:8048846-8048956:1:exon
so has part: feature:8055829-8055932:1:exon
so has part: feature:8164324-8164522:1:exon
so has part: feature:8166030-8168108:1:exon

position:8003031:1
position: 8003031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8003031-8003471:1:exon

position:8003471:1
position: 8003471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8048846-8048956:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8055829-8055932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8164324-8164522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8166030-8168108:1:exon

FGF14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: FGF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 14 isoform X2
translation: MAAAIASGLIRQKRQAREQHWDRPSASRRRSSPSKNRGLCNGNLVDIFSKVRIFGLKKRRLRRQDPQLKGIVTRLYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVKTGLYVAMNGEGYLYPSELFTPECKFKESVFENYYVIYSSMLYRQQESGRAWFLGLNKEGQVMKGNRVKKTKPAAHFLPKPLEVAMYREPSLHDVGETVPKAGVTPSKSTSASAIMNGGKPVNKSKTT
SIO_010081: FGF14
subclass of: SO_0000673
so part of: FGF14
location: join(8003279..8003471,8048846..8048956,8055829..8055932,8164324..8164522,8166030..8166166)
location: region:8003279-8166166:1
so has part: feature:8003279-8003471:1:exon
so has part: feature:8048846-8048956:1:exon
so has part: feature:8055829-8055932:1:exon
so has part: feature:8164324-8164522:1:exon
so has part: feature:8166030-8166166:1:exon

XP_017911872.1
type: Protein
SIO_000068: ncbiprotein

position:8003279:1
position: 8003279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8003279-8003471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8048846-8048956:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8055829-8055932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8164324-8164522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8166030-8166166:1:exon

ITGBL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ITGBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8167683..8399093)
location: region:8167683-8399093:-1
so has part: feature:8167683-8399093:-1:exon
subclass of: SO_0000010

102179491
type: Gene
SIO_000068: ncbigene

position:8167683:-1
position: 8167683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8399093:-1
position: 8399093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8167683-8399093:-1:exon

ITGBL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ITGBL1
product: integrin subunit beta like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 15 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_018056382.1
SIO_010081: ITGBL1
subclass of: SO_0000673
so part of: ITGBL1
location: complement(join(8167683..8173258,8174267..8174380,8180330..8180476,8205836..8205952,8280538..8280684,8288919..8289059,8291612..8291752,8296745..8296867,8303251..8303397,8397561..8397781,8398745..8399093))
location: region:8167683-8399093:-1
so has part: feature:8398745-8399093:-1:exon
so has part: feature:8397561-8397781:-1:exon
so has part: feature:8303251-8303397:-1:exon
so has part: feature:8296745-8296867:-1:exon
so has part: feature:8291612-8291752:-1:exon
so has part: feature:8288919-8289059:-1:exon
so has part: feature:8280538-8280684:-1:exon
so has part: feature:8205836-8205952:-1:exon
so has part: feature:8180330-8180476:-1:exon
so has part: feature:8174267-8174380:-1:exon
so has part: feature:8167683-8173258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8398745-8399093:-1:exon

position:8398745:-1
position: 8398745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8397561-8397781:-1:exon

position:8397561:-1
position: 8397561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8397781:-1
position: 8397781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8303251-8303397:-1:exon

position:8303251:-1
position: 8303251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8303397:-1
position: 8303397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8296745-8296867:-1:exon

position:8296745:-1
position: 8296745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8296867:-1
position: 8296867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8291612-8291752:-1:exon

position:8291612:-1
position: 8291612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8291752:-1
position: 8291752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8288919-8289059:-1:exon

position:8288919:-1
position: 8288919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8289059:-1
position: 8289059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8280538-8280684:-1:exon

position:8280538:-1
position: 8280538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8280684:-1
position: 8280684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8205836-8205952:-1:exon

position:8205836:-1
position: 8205836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8205952:-1
position: 8205952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8180330-8180476:-1:exon

position:8180330:-1
position: 8180330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8180476:-1
position: 8180476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8174267-8174380:-1:exon

position:8174267:-1
position: 8174267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8174380:-1
position: 8174380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8167683-8173258:-1:exon

position:8173258:-1
position: 8173258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ITGBL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ITGBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin beta-like protein 1
translation: MRPAGLGSVLLLVSSLLLPGGLSAVPQSFSPSLRSGPGAAACRLSRAESERRCRAPGQPPGGALCHGRGRCDCGVCICHVSEPGVYFGPLCECHEWVCEAYDGSTCAGHGKCDCGRCKCDEGWFGDACQYPTNCDLTKKKSNQMCKNSQDIICSNAGTCHCGRCKCDNSDGNGLVYGKFCECDDRECIDDETEEICGGHGKCYCGNCYCQAGWHGDKCEFQCDITPWESKRRCTSPDGKVCSNRGICVCGECSCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSGHGQCNCGRCDCKVGWYGKKCEHPRSCPLSTEESIRKCQGSATLPCSGRGKCECGKCTCYPPGDSRVYGKTCECDDRRCEDLDGVVCGGHGACSCGRCVCEKGWFGTLCQHPRKCNLTEEQSNSLCESADGILCSGKGSCHCGKCLCSAEEWYISGEFCDCDDRDCDKHDGLICTGNGICSCGNCECWDGWNGNACEIWLGTEYP
SIO_010081: ITGBL1
subclass of: SO_0000673
so part of: ITGBL1
location: complement(join(8173167..8173258,8174267..8174380,8180330..8180476,8205836..8205952,8280538..8280684,8288919..8289059,8291612..8291752,8296745..8296867,8303251..8303397,8397561..8397781,8398745..8398845))
location: region:8173167-8398845:-1
so has part: feature:8398745-8398845:-1:exon
so has part: feature:8397561-8397781:-1:exon
so has part: feature:8303251-8303397:-1:exon
so has part: feature:8296745-8296867:-1:exon
so has part: feature:8291612-8291752:-1:exon
so has part: feature:8288919-8289059:-1:exon
so has part: feature:8280538-8280684:-1:exon
so has part: feature:8205836-8205952:-1:exon
so has part: feature:8180330-8180476:-1:exon
so has part: feature:8174267-8174380:-1:exon
so has part: feature:8173167-8173258:-1:exon

XP_017911871.1
type: Protein
SIO_000068: ncbiprotein

position:8173167:-1
position: 8173167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8398845:-1
position: 8398845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8398745-8398845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8397561-8397781:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8303251-8303397:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8296745-8296867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8291612-8291752:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8288919-8289059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8280538-8280684:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8205836-8205952:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8180330-8180476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8174267-8174380:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8173167-8173258:-1:exon

LOC106502722
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC106502722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8213458..8215208
location: region:8213458-8215208:1
so has part: feature:8213458-8215208:1:exon

106502722
type: Gene
SIO_000068: ncbigene

position:8213458:1
position: 8213458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8215208:1
position: 8215208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8213458-8215208:1:exon

LOC106502722
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9925
gene: LOC106502722
product: elongation factor 1-alpha 1 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 208 ESTs, 27 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_001918924.1
SIO_010081: LOC106502722
so part of: LOC106502722
location: 8213458..8215208
location: region:8213458-8215208:1
so has part: feature:8213458-8215208:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8213458-8215208:1:exon

NALCN
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: NALCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8418781..8721126
location: region:8418781-8721126:1
so has part: feature:8418781-8721126:1:exon
subclass of: SO_0000010

102168838
type: Gene
SIO_000068: ncbigene

position:8418781:1
position: 8418781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8721126:1
position: 8721126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8418781-8721126:1:exon

NALCN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NALCN
product: sodium leak channel, non-selective, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 23 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018056384.1
SIO_010081: NALCN
subclass of: SO_0000673
so part of: NALCN
location: join(8418781..8418813,8439854..8440000,8445926..8446108,8455485..8455568,8456817..8456956,8457041..8457169,8464111..8464265,8510766..8510908,8511035..8511139,8518830..8518916,8537792..8537923,8554511..8554678,8562939..8563130,8590580..8590717,8607340..8607414,8629262..8629398,8630714..8630855,8648300..8648373,8665494..8665595,8666001..8666070,8671097..8671188,8671294..8671416,8674329..8674385,8674610..8674730,8674827..8674958,8676043..8676210,8677955..8678059,8681859..8681965,8690638..8690758,8690849..8690947,8695479..8695572,8696088..8696194,8696400..8696474,8697713..8697832,8701302..8701370,8702711..8702859,8703695..8703788,8706032..8706164,8706825..8706940,8709048..8709205,8712830..8712980,8715718..8715867,8717520..8717637,8719287..8721126)
location: region:8418781-8721126:1
so has part: feature:8418781-8418813:1:exon
so has part: feature:8439854-8440000:1:exon
so has part: feature:8445926-8446108:1:exon
so has part: feature:8455485-8455568:1:exon
so has part: feature:8456817-8456956:1:exon
so has part: feature:8457041-8457169:1:exon
so has part: feature:8464111-8464265:1:exon
so has part: feature:8510766-8510908:1:exon
so has part: feature:8511035-8511139:1:exon
so has part: feature:8518830-8518916:1:exon
so has part: feature:8537792-8537923:1:exon
so has part: feature:8554511-8554678:1:exon
so has part: feature:8562939-8563130:1:exon
so has part: feature:8590580-8590717:1:exon
so has part: feature:8607340-8607414:1:exon
so has part: feature:8629262-8629398:1:exon
so has part: feature:8630714-8630855:1:exon
so has part: feature:8648300-8648373:1:exon
so has part: feature:8665494-8665595:1:exon
so has part: feature:8666001-8666070:1:exon
so has part: feature:8671097-8671188:1:exon
so has part: feature:8671294-8671416:1:exon
so has part: feature:8674329-8674385:1:exon
so has part: feature:8674610-8674730:1:exon
so has part: feature:8674827-8674958:1:exon
so has part: feature:8676043-8676210:1:exon
so has part: feature:8677955-8678059:1:exon
so has part: feature:8681859-8681965:1:exon
so has part: feature:8690638-8690758:1:exon
so has part: feature:8690849-8690947:1:exon
so has part: feature:8695479-8695572:1:exon
so has part: feature:8696088-8696194:1:exon
so has part: feature:8696400-8696474:1:exon
so has part: feature:8697713-8697832:1:exon
so has part: feature:8701302-8701370:1:exon
so has part: feature:8702711-8702859:1:exon
so has part: feature:8703695-8703788:1:exon
so has part: feature:8706032-8706164:1:exon
so has part: feature:8706825-8706940:1:exon
so has part: feature:8709048-8709205:1:exon
so has part: feature:8712830-8712980:1:exon
so has part: feature:8715718-8715867:1:exon
so has part: feature:8717520-8717637:1:exon
so has part: feature:8719287-8721126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8418781-8418813:1:exon

position:8418813:1
position: 8418813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8439854-8440000:1:exon

position:8439854:1
position: 8439854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8440000:1
position: 8440000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8445926-8446108:1:exon

position:8445926:1
position: 8445926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8446108:1
position: 8446108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8455485-8455568:1:exon

position:8455485:1
position: 8455485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8455568:1
position: 8455568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8456817-8456956:1:exon

position:8456817:1
position: 8456817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8456956:1
position: 8456956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8457041-8457169:1:exon

position:8457041:1
position: 8457041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8457169:1
position: 8457169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8464111-8464265:1:exon

position:8464111:1
position: 8464111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8464265:1
position: 8464265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8510766-8510908:1:exon

position:8510766:1
position: 8510766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8510908:1
position: 8510908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8511035-8511139:1:exon

position:8511035:1
position: 8511035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8511139:1
position: 8511139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8518830-8518916:1:exon

position:8518830:1
position: 8518830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8518916:1
position: 8518916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8537792-8537923:1:exon

position:8537792:1
position: 8537792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8537923:1
position: 8537923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8554511-8554678:1:exon

position:8554511:1
position: 8554511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8554678:1
position: 8554678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8562939-8563130:1:exon

position:8562939:1
position: 8562939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8563130:1
position: 8563130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8590580-8590717:1:exon

position:8590580:1
position: 8590580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8590717:1
position: 8590717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8607340-8607414:1:exon

position:8607340:1
position: 8607340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8607414:1
position: 8607414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8629262-8629398:1:exon

position:8629262:1
position: 8629262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8629398:1
position: 8629398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8630714-8630855:1:exon

position:8630714:1
position: 8630714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8630855:1
position: 8630855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8648300-8648373:1:exon

position:8648300:1
position: 8648300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8648373:1
position: 8648373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8665494-8665595:1:exon

position:8665494:1
position: 8665494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8665595:1
position: 8665595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8666001-8666070:1:exon

position:8666001:1
position: 8666001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8666070:1
position: 8666070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8671097-8671188:1:exon

position:8671097:1
position: 8671097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8671188:1
position: 8671188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:8671294-8671416:1:exon

position:8671294:1
position: 8671294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8671416:1
position: 8671416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:8674329-8674385:1:exon

position:8674329:1
position: 8674329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8674385:1
position: 8674385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:8674610-8674730:1:exon

position:8674610:1
position: 8674610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8674730:1
position: 8674730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:8674827-8674958:1:exon

position:8674827:1
position: 8674827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8674958:1
position: 8674958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:8676043-8676210:1:exon

position:8676043:1
position: 8676043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8676210:1
position: 8676210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:8677955-8678059:1:exon

position:8677955:1
position: 8677955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8678059:1
position: 8678059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:8681859-8681965:1:exon

position:8681859:1
position: 8681859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8681965:1
position: 8681965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:8690638-8690758:1:exon

position:8690638:1
position: 8690638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8690758:1
position: 8690758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:8690849-8690947:1:exon

position:8690849:1
position: 8690849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8690947:1
position: 8690947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:8695479-8695572:1:exon

position:8695479:1
position: 8695479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8695572:1
position: 8695572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:8696088-8696194:1:exon

position:8696088:1
position: 8696088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8696194:1
position: 8696194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:8696400-8696474:1:exon

position:8696400:1
position: 8696400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8696474:1
position: 8696474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:8697713-8697832:1:exon

position:8697713:1
position: 8697713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8697832:1
position: 8697832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:8701302-8701370:1:exon

position:8701302:1
position: 8701302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8701370:1
position: 8701370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:8702711-8702859:1:exon

position:8702711:1
position: 8702711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8702859:1
position: 8702859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:8703695-8703788:1:exon

position:8703695:1
position: 8703695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8703788:1
position: 8703788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:8706032-8706164:1:exon

position:8706032:1
position: 8706032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8706164:1
position: 8706164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:8706825-8706940:1:exon

position:8706825:1
position: 8706825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8706940:1
position: 8706940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:8709048-8709205:1:exon

position:8709048:1
position: 8709048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8709205:1
position: 8709205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:8712830-8712980:1:exon

position:8712830:1
position: 8712830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8712980:1
position: 8712980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:8715718-8715867:1:exon

position:8715718:1
position: 8715718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8715867:1
position: 8715867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:8717520-8717637:1:exon

position:8717520:1
position: 8717520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8717637:1
position: 8717637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:8719287-8721126:1:exon

position:8719287:1
position: 8719287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NALCN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: NALCN
product: sodium leak channel, non-selective, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 23 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_018056385.1
SIO_010081: NALCN
subclass of: SO_0000673
so part of: NALCN
location: join(8439854..8440000,8445926..8446108,8455485..8455568,8456817..8456956,8457041..8457169,8464111..8464230,8510766..8510908,8511035..8511139,8518830..8518916,8537792..8537923,8554511..8554678,8562939..8563130,8590580..8590717,8607340..8607414,8629262..8629398,8630714..8630855,8648300..8648373,8665494..8665595,8666001..8666070,8671097..8671188,8671294..8671416,8674329..8674385,8674610..8674730,8674827..8674958,8676043..8676210,8677955..8678059,8681859..8681965,8690638..8690758,8690849..8690947,8695479..8695572,8696088..8696194,8696400..8696474,8697713..8697832,8701302..8701370,8702711..8702859,8703695..8703788,8706032..8706164,8706825..8706940,8709048..8709205,8712830..8712980,8715718..8715867,8717520..8717637,8719287..8721126)
location: region:8439854-8721126:1
so has part: feature:8439854-8440000:1:exon
so has part: feature:8445926-8446108:1:exon
so has part: feature:8455485-8455568:1:exon
so has part: feature:8456817-8456956:1:exon
so has part: feature:8457041-8457169:1:exon
so has part: feature:8464111-8464230:1:exon
so has part: feature:8510766-8510908:1:exon
so has part: feature:8511035-8511139:1:exon
so has part: feature:8518830-8518916:1:exon
so has part: feature:8537792-8537923:1:exon
so has part: feature:8554511-8554678:1:exon
so has part: feature:8562939-8563130:1:exon
so has part: feature:8590580-8590717:1:exon
so has part: feature:8607340-8607414:1:exon
so has part: feature:8629262-8629398:1:exon
so has part: feature:8630714-8630855:1:exon
so has part: feature:8648300-8648373:1:exon
so has part: feature:8665494-8665595:1:exon
so has part: feature:8666001-8666070:1:exon
so has part: feature:8671097-8671188:1:exon
so has part: feature:8671294-8671416:1:exon
so has part: feature:8674329-8674385:1:exon
so has part: feature:8674610-8674730:1:exon
so has part: feature:8674827-8674958:1:exon
so has part: feature:8676043-8676210:1:exon
so has part: feature:8677955-8678059:1:exon
so has part: feature:8681859-8681965:1:exon
so has part: feature:8690638-8690758:1:exon
so has part: feature:8690849-8690947:1:exon
so has part: feature:8695479-8695572:1:exon
so has part: feature:8696088-8696194:1:exon
so has part: feature:8696400-8696474:1:exon
so has part: feature:8697713-8697832:1:exon
so has part: feature:8701302-8701370:1:exon
so has part: feature:8702711-8702859:1:exon
so has part: feature:8703695-8703788:1:exon
so has part: feature:8706032-8706164:1:exon
so has part: feature:8706825-8706940:1:exon
so has part: feature:8709048-8709205:1:exon
so has part: feature:8712830-8712980:1:exon
so has part: feature:8715718-8715867:1:exon
so has part: feature:8717520-8717637:1:exon
so has part: feature:8719287-8721126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8439854-8440000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8445926-8446108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8455485-8455568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8456817-8456956:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8457041-8457169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8464111-8464230:1:exon

position:8464230:1
position: 8464230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8510766-8510908:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8511035-8511139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8518830-8518916:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8537792-8537923:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8554511-8554678:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8562939-8563130:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8590580-8590717:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8607340-8607414:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8629262-8629398:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8630714-8630855:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8648300-8648373:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8665494-8665595:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8666001-8666070:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8671097-8671188:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8671294-8671416:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8674329-8674385:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:8674610-8674730:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:8674827-8674958:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:8676043-8676210:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:8677955-8678059:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:8681859-8681965:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:8690638-8690758:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:8690849-8690947:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:8695479-8695572:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:8696088-8696194:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:8696400-8696474:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:8697713-8697832:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:8701302-8701370:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:8702711-8702859:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:8703695-8703788:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:8706032-8706164:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:8706825-8706940:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:8709048-8709205:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:8712830-8712980:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:8715718-8715867:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:8717520-8717637:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:8719287-8721126:1:exon

NALCN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NALCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium leak channel non-selective protein isoform X1
translation: MLKRKQSSRVEAQPVTDFGPDESLSDNADILWINKPWVHSLLRICAIISVISVCMNTPMTFEHYPPLQYVTFTLDTLLMFLYTAEMIAKMHIRGIVKGDSSYVKDRWCVFDGFMVFCLWVSLVLQVFEIADIVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWSVSIFLLFFLLLYGILGVQMFGTFTYHCVVNDTKPGNVTWNSLAIPDTHCSPELEEGYQCPPGFKCMDLEDLGLSRQELGYSGFNEIGTSIFTVYEAASQEGWVFLMYRAIDSFPRWRSYFYFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGSRSSTTSTATTQMFHEDAAGGWQLVAVDVNKPQGRAPACLQQMMRSSVFHMFILSMVTVDVIVAASNYHKGESFKRQYDEFYLAEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVIGTTLHAYPDLYHSQFTYFQVLRVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTFPRAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPVVAIYFILYHLFATLILLSLFVAVILDNLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRESFMKQFIDRQQQDTCCLLRSLPSTSSSSCDHAKRSAIEDNKYIDQKLRKSVFSIRARNLLEKETAVTKILRACTRQRMLSGSFEGQPAKERSILSVQHHIRQERRSLRHGSNSQRISRGKSLETLTQDHSNTVRYRNAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIVGREHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYHQLYDLLGLVTYLDWVMIIVTICSCISMMFESPFRRVMHTPTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIFIYLVSLIFLCWMPQNVPAESGAQLLLVLRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLVSILLLTLMLVFASFGVQLFAGKLAKCNDPNIIRREDCNGIFRINVSVSKNLNLKLRPGEKKPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPMHGIYIHVFVFLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPDNDGFRAKMYDITQHPFFKRTIALLVLAQSVLLSVKWDVEDPVTVPLATMSVVFTFIFVLEVTMKIIAMSPAGFWQSRRNRYDLLVTSLGVVWVVLHFALLNAYTYMMGACVIVFRFFSICGKHVTLKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAITVLFRIVTGEDWNKIMHDCMVQPPFCTPDEFTYWATDCGNYAGALMYFCSFYVIIAYIMLNLLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNMVDDKREGVIPTFRVKFLLRLLRGRLEVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIISLKQSQQQELKRILNPPSIETTQPSEDLKTNSQDNSVQPESSSQQQLLSPTLSDRGAGRQDAAEAGKPQRKFGQWRLPSAPKPISHSVSSVNLRFGGRTTMKSVVCKMNPMTDTASCGSEVKKWWTRQLTVESDESGDDLLDI
SIO_010081: NALCN
subclass of: SO_0000673
so part of: NALCN
location: join(8439893..8440000,8445926..8446108,8455485..8455568,8456817..8456956,8457041..8457169,8464111..8464265,8510766..8510908,8511035..8511139,8518830..8518916,8537792..8537923,8554511..8554678,8562939..8563130,8590580..8590717,8607340..8607414,8629262..8629398,8630714..8630855,8648300..8648373,8665494..8665595,8666001..8666070,8671097..8671188,8671294..8671416,8674329..8674385,8674610..8674730,8674827..8674958,8676043..8676210,8677955..8678059,8681859..8681965,8690638..8690758,8690849..8690947,8695479..8695572,8696088..8696194,8696400..8696474,8697713..8697832,8701302..8701370,8702711..8702859,8703695..8703788,8706032..8706164,8706825..8706940,8709048..8709205,8712830..8712980,8715718..8715867,8717520..8717637,8719287..8719480)
location: region:8439893-8719480:1
so has part: feature:8439893-8440000:1:exon
so has part: feature:8445926-8446108:1:exon
so has part: feature:8455485-8455568:1:exon
so has part: feature:8456817-8456956:1:exon
so has part: feature:8457041-8457169:1:exon
so has part: feature:8464111-8464265:1:exon
so has part: feature:8510766-8510908:1:exon
so has part: feature:8511035-8511139:1:exon
so has part: feature:8518830-8518916:1:exon
so has part: feature:8537792-8537923:1:exon
so has part: feature:8554511-8554678:1:exon
so has part: feature:8562939-8563130:1:exon
so has part: feature:8590580-8590717:1:exon
so has part: feature:8607340-8607414:1:exon
so has part: feature:8629262-8629398:1:exon
so has part: feature:8630714-8630855:1:exon
so has part: feature:8648300-8648373:1:exon
so has part: feature:8665494-8665595:1:exon
so has part: feature:8666001-8666070:1:exon
so has part: feature:8671097-8671188:1:exon
so has part: feature:8671294-8671416:1:exon
so has part: feature:8674329-8674385:1:exon
so has part: feature:8674610-8674730:1:exon
so has part: feature:8674827-8674958:1:exon
so has part: feature:8676043-8676210:1:exon
so has part: feature:8677955-8678059:1:exon
so has part: feature:8681859-8681965:1:exon
so has part: feature:8690638-8690758:1:exon
so has part: feature:8690849-8690947:1:exon
so has part: feature:8695479-8695572:1:exon
so has part: feature:8696088-8696194:1:exon
so has part: feature:8696400-8696474:1:exon
so has part: feature:8697713-8697832:1:exon
so has part: feature:8701302-8701370:1:exon
so has part: feature:8702711-8702859:1:exon
so has part: feature:8703695-8703788:1:exon
so has part: feature:8706032-8706164:1:exon
so has part: feature:8706825-8706940:1:exon
so has part: feature:8709048-8709205:1:exon
so has part: feature:8712830-8712980:1:exon
so has part: feature:8715718-8715867:1:exon
so has part: feature:8717520-8717637:1:exon
so has part: feature:8719287-8719480:1:exon

XP_017911873.1
type: Protein
SIO_000068: ncbiprotein

position:8439893:1
position: 8439893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8719480:1
position: 8719480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8439893-8440000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8445926-8446108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8455485-8455568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8456817-8456956:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8457041-8457169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8464111-8464265:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8510766-8510908:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8511035-8511139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8518830-8518916:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8537792-8537923:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8554511-8554678:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8562939-8563130:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8590580-8590717:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8607340-8607414:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8629262-8629398:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8630714-8630855:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8648300-8648373:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8665494-8665595:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8666001-8666070:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8671097-8671188:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8671294-8671416:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8674329-8674385:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:8674610-8674730:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:8674827-8674958:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:8676043-8676210:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:8677955-8678059:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:8681859-8681965:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:8690638-8690758:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:8690849-8690947:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:8695479-8695572:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:8696088-8696194:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:8696400-8696474:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:8697713-8697832:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:8701302-8701370:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:8702711-8702859:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:8703695-8703788:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:8706032-8706164:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:8706825-8706940:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:8709048-8709205:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:8712830-8712980:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:8715718-8715867:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:8717520-8717637:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:8719287-8719480:1:exon

NALCN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: NALCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium leak channel non-selective protein isoform X2
translation: MYRAIDSFPRWRSYFYFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGSRSSTTSTATTQMFHEDAAGGWQLVAVDVNKPQGRAPACLQQMMRSSVFHMFILSMVTVDVIVAASNYHKGESFKRQYDEFYLAEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVIGTTLHAYPDLYHSQFTYFQVLRVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTFPRAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPVVAIYFILYHLFATLILLSLFVAVILDNLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRESFMKQFIDRQQQDTCCLLRSLPSTSSSSCDHAKRSAIEDNKYIDQKLRKSVFSIRARNLLEKETAVTKILRACTRQRMLSGSFEGQPAKERSILSVQHHIRQERRSLRHGSNSQRISRGKSLETLTQDHSNTVRYRNAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIVGREHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYHQLYDLLGLVTYLDWVMIIVTICSCISMMFESPFRRVMHTPTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIFIYLVSLIFLCWMPQNVPAESGAQLLLVLRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLVSILLLTLMLVFASFGVQLFAGKLAKCNDPNIIRREDCNGIFRINVSVSKNLNLKLRPGEKKPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPMHGIYIHVFVFLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPDNDGFRAKMYDITQHPFFKRTIALLVLAQSVLLSVKWDVEDPVTVPLATMSVVFTFIFVLEVTMKIIAMSPAGFWQSRRNRYDLLVTSLGVVWVVLHFALLNAYTYMMGACVIVFRFFSICGKHVTLKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAITVLFRIVTGEDWNKIMHDCMVQPPFCTPDEFTYWATDCGNYAGALMYFCSFYVIIAYIMLNLLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNMVDDKREGVIPTFRVKFLLRLLRGRLEVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIISLKQSQQQELKRILNPPSIETTQPSEDLKTNSQDNSVQPESSSQQQLLSPTLSDRGAGRQDAAEAGKPQRKFGQWRLPSAPKPISHSVSSVNLRFGGRTTMKSVVCKMNPMTDTASCGSEVKKWWTRQLTVESDESGDDLLDI
SIO_010081: NALCN
subclass of: SO_0000673
so part of: NALCN
location: join(8510822..8510908,8511035..8511139,8518830..8518916,8537792..8537923,8554511..8554678,8562939..8563130,8590580..8590717,8607340..8607414,8629262..8629398,8630714..8630855,8648300..8648373,8665494..8665595,8666001..8666070,8671097..8671188,8671294..8671416,8674329..8674385,8674610..8674730,8674827..8674958,8676043..8676210,8677955..8678059,8681859..8681965,8690638..8690758,8690849..8690947,8695479..8695572,8696088..8696194,8696400..8696474,8697713..8697832,8701302..8701370,8702711..8702859,8703695..8703788,8706032..8706164,8706825..8706940,8709048..8709205,8712830..8712980,8715718..8715867,8717520..8717637,8719287..8719480)
location: region:8510822-8719480:1
so has part: feature:8510822-8510908:1:exon
so has part: feature:8511035-8511139:1:exon
so has part: feature:8518830-8518916:1:exon
so has part: feature:8537792-8537923:1:exon
so has part: feature:8554511-8554678:1:exon
so has part: feature:8562939-8563130:1:exon
so has part: feature:8590580-8590717:1:exon
so has part: feature:8607340-8607414:1:exon
so has part: feature:8629262-8629398:1:exon
so has part: feature:8630714-8630855:1:exon
so has part: feature:8648300-8648373:1:exon
so has part: feature:8665494-8665595:1:exon
so has part: feature:8666001-8666070:1:exon
so has part: feature:8671097-8671188:1:exon
so has part: feature:8671294-8671416:1:exon
so has part: feature:8674329-8674385:1:exon
so has part: feature:8674610-8674730:1:exon
so has part: feature:8674827-8674958:1:exon
so has part: feature:8676043-8676210:1:exon
so has part: feature:8677955-8678059:1:exon
so has part: feature:8681859-8681965:1:exon
so has part: feature:8690638-8690758:1:exon
so has part: feature:8690849-8690947:1:exon
so has part: feature:8695479-8695572:1:exon
so has part: feature:8696088-8696194:1:exon
so has part: feature:8696400-8696474:1:exon
so has part: feature:8697713-8697832:1:exon
so has part: feature:8701302-8701370:1:exon
so has part: feature:8702711-8702859:1:exon
so has part: feature:8703695-8703788:1:exon
so has part: feature:8706032-8706164:1:exon
so has part: feature:8706825-8706940:1:exon
so has part: feature:8709048-8709205:1:exon
so has part: feature:8712830-8712980:1:exon
so has part: feature:8715718-8715867:1:exon
so has part: feature:8717520-8717637:1:exon
so has part: feature:8719287-8719480:1:exon

XP_017911874.1
type: Protein
SIO_000068: ncbiprotein

position:8510822:1
position: 8510822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8510822-8510908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8511035-8511139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8518830-8518916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8537792-8537923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8554511-8554678:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8562939-8563130:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8590580-8590717:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8607340-8607414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8629262-8629398:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8630714-8630855:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8648300-8648373:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8665494-8665595:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8666001-8666070:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8671097-8671188:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8671294-8671416:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8674329-8674385:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8674610-8674730:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8674827-8674958:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8676043-8676210:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8677955-8678059:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8681859-8681965:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8690638-8690758:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:8690849-8690947:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:8695479-8695572:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:8696088-8696194:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:8696400-8696474:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:8697713-8697832:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:8701302-8701370:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:8702711-8702859:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:8703695-8703788:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:8706032-8706164:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:8706825-8706940:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:8709048-8709205:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:8712830-8712980:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:8715718-8715867:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:8717520-8717637:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:8719287-8719480:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 8670442..8670513
location: region:8670442-8670513:1
so has part: feature:8670442-8670513:1:exon
subclass of: SO_0000663

108637333
type: Gene
SIO_000068: ncbigene

position:8670442:1
position: 8670442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8670513:1
position: 8670513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8670442-8670513:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon GCA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:8670475..8670477,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 8670442..8670513
location: region:8670442-8670513:1
so has part: feature:8670442-8670513:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8670442-8670513:1:exon

LOC102168554
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102168554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8931306..8932721)
location: region:8931306-8932721:-1
so has part: feature:8931306-8932721:-1:exon

102168554
type: Gene
SIO_000068: ncbigene

position:8931306:-1
position: 8931306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8932721:-1
position: 8932721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8931306-8932721:-1:exon

LOC102168554
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102168554
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102168554
subclass of: SO_0000673
so part of: LOC102168554
location: complement(8931306..8932721)
location: region:8931306-8932721:-1
so has part: feature:8931306-8932721:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8931306-8932721:-1:exon

TMTC4
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TMTC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9006746..9063662
location: region:9006746-9063662:1
so has part: feature:9006746-9063662:1:exon
subclass of: SO_0000010

102179020
type: Gene
SIO_000068: ncbigene

position:9006746:1
position: 9006746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9063662:1
position: 9063662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9006746-9063662:1:exon

TMTC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TMTC4
product: transmembrane and tetratricopeptide repeat containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 38 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_018056386.1
SIO_010081: TMTC4
subclass of: SO_0000673
so part of: TMTC4
location: join(9006746..9006847,9013435..9013650,9017479..9017594,9018881..9019097,9024702..9024789,9037903..9038000,9041186..9041278,9041508..9041672,9043020..9043222,9044716..9044887,9044977..9045108,9050559..9050638,9050809..9050916,9051010..9051151,9056878..9056992,9058059..9058171,9059817..9059886,9061770..9063662)
location: region:9006746-9063662:1
so has part: feature:9006746-9006847:1:exon
so has part: feature:9013435-9013650:1:exon
so has part: feature:9017479-9017594:1:exon
so has part: feature:9018881-9019097:1:exon
so has part: feature:9024702-9024789:1:exon
so has part: feature:9037903-9038000:1:exon
so has part: feature:9041186-9041278:1:exon
so has part: feature:9041508-9041672:1:exon
so has part: feature:9043020-9043222:1:exon
so has part: feature:9044716-9044887:1:exon
so has part: feature:9044977-9045108:1:exon
so has part: feature:9050559-9050638:1:exon
so has part: feature:9050809-9050916:1:exon
so has part: feature:9051010-9051151:1:exon
so has part: feature:9056878-9056992:1:exon
so has part: feature:9058059-9058171:1:exon
so has part: feature:9059817-9059886:1:exon
so has part: feature:9061770-9063662:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9006746-9006847:1:exon

position:9006847:1
position: 9006847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9013435-9013650:1:exon

position:9013435:1
position: 9013435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9013650:1
position: 9013650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9017479-9017594:1:exon

position:9017479:1
position: 9017479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9017594:1
position: 9017594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9018881-9019097:1:exon

position:9018881:1
position: 9018881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9019097:1
position: 9019097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9024702-9024789:1:exon

position:9024702:1
position: 9024702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9024789:1
position: 9024789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9037903-9038000:1:exon

position:9037903:1
position: 9037903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9038000:1
position: 9038000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9041186-9041278:1:exon

position:9041186:1
position: 9041186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9041278:1
position: 9041278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9041508-9041672:1:exon

position:9041508:1
position: 9041508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9041672:1
position: 9041672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9043020-9043222:1:exon

position:9043020:1
position: 9043020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9043222:1
position: 9043222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9044716-9044887:1:exon

position:9044716:1
position: 9044716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9044887:1
position: 9044887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9044977-9045108:1:exon

position:9044977:1
position: 9044977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9045108:1
position: 9045108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9050559-9050638:1:exon

position:9050559:1
position: 9050559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9050638:1
position: 9050638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9050809-9050916:1:exon

position:9050809:1
position: 9050809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9050916:1
position: 9050916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9051010-9051151:1:exon

position:9051010:1
position: 9051010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9051151:1
position: 9051151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9056878-9056992:1:exon

position:9056878:1
position: 9056878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9056992:1
position: 9056992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9058059-9058171:1:exon

position:9058059:1
position: 9058059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9058171:1
position: 9058171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9059817-9059886:1:exon

position:9059817:1
position: 9059817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9059886:1
position: 9059886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9061770-9063662:1:exon

position:9061770:1
position: 9061770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMTC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TMTC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and TPR repeat-containing protein 4
translation: MAEWDASLDHIIPSSVLPPFWAKFLVGFASLVCFARSYDGDFVFDDSEAIVNNKDLRAETPLGDLWHHDFWGSRLSSNTSHKSYRPLTVLTFRMNYYLSGGFHPMSFHVVNIALHGGICVLLVDVFSVLFGGLQYTSKGRRLNLAPRSSLLAALLFAVHPVHTECVAGVVGRADLLGALFFLLSFLGYCKAFRETNKEGTHSTFWVLLSILLGAVAMLCKEQGITVLGLNAIFDILVIGKLNVLEIVRKVLRKDRSLESPGMLRTGGLLFRMTLLALGGAGVLYVRWKIMGTGPPAFTEVDNPASFADSVLVRAINYNYYYSLNAWLLLCPWWLCFDWSMGCIPLIKSVGDWRVIALAALWFCLIGLIRQVLCSEDSHKRRILTLGLGLLIIPFLPASNLFFRVGFVVAERVLYLPSAGYCMLLTFGFAALSKHTKKKKLIAALILGILFLNTLRCVVRSGEWRSEDQLFRSALSVCPLNAKVHYNVGKNLADKGNQTAAIRYYREAVRLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQPDFAAAWMNLGIVQNSLKRFQAAEQSYRTAIKHRRKYPDCYYNLGRLYADLNRHVDALNAWRNATVLKPEHSLAWNNMIILLDNTGNLAQAEAVGREALELIPNDHSLMFSLANVLGKSQKYKESEALFLKAIKAHPNTASYHGNLAVLYHRWGHLDLAKKHYEISLRLDPTASGTKENYGLLRRKLEQMQKKNV
SIO_010081: TMTC4
subclass of: SO_0000673
so part of: TMTC4
location: join(9013489..9013650,9017479..9017594,9018881..9019097,9024702..9024789,9037903..9038000,9041186..9041278,9041508..9041672,9043020..9043222,9044716..9044887,9044977..9045108,9050559..9050638,9050809..9050916,9051010..9051151,9056878..9056992,9058059..9058171,9059817..9059886,9061770..9061918)
location: region:9013489-9061918:1
so has part: feature:9013489-9013650:1:exon
so has part: feature:9017479-9017594:1:exon
so has part: feature:9018881-9019097:1:exon
so has part: feature:9024702-9024789:1:exon
so has part: feature:9037903-9038000:1:exon
so has part: feature:9041186-9041278:1:exon
so has part: feature:9041508-9041672:1:exon
so has part: feature:9043020-9043222:1:exon
so has part: feature:9044716-9044887:1:exon
so has part: feature:9044977-9045108:1:exon
so has part: feature:9050559-9050638:1:exon
so has part: feature:9050809-9050916:1:exon
so has part: feature:9051010-9051151:1:exon
so has part: feature:9056878-9056992:1:exon
so has part: feature:9058059-9058171:1:exon
so has part: feature:9059817-9059886:1:exon
so has part: feature:9061770-9061918:1:exon

XP_017911875.1
type: Protein
SIO_000068: ncbiprotein

position:9013489:1
position: 9013489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9061918:1
position: 9061918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9013489-9013650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9017479-9017594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9018881-9019097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9024702-9024789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9037903-9038000:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9041186-9041278:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9041508-9041672:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9043020-9043222:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9044716-9044887:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9044977-9045108:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9050559-9050638:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9050809-9050916:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9051010-9051151:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9056878-9056992:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9058059-9058171:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9059817-9059886:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9061770-9061918:1:exon

GGACT
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: GGACT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9074091..9126965
location: region:9074091-9126965:1
so has part: feature:9074091-9126965:1:exon
subclass of: SO_0000010

102168275
type: Gene
SIO_000068: ncbigene

position:9074091:1
position: 9074091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9126965:1
position: 9126965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9074091-9126965:1:exon

GGACT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: GGACT
product: gamma-glutamylamine cyclotransferase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_018056391.1
SIO_010081: GGACT
subclass of: SO_0000673
so part of: GGACT
location: join(9074091..9074166,9115721..9115775,9122195..9122349,9125500..9125650,9125997..9126965)
location: region:9074091-9126965:1
so has part: feature:9074091-9074166:1:exon
so has part: feature:9115721-9115775:1:exon
so has part: feature:9122195-9122349:1:exon
so has part: feature:9125500-9125650:1:exon
so has part: feature:9125997-9126965:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9074091-9074166:1:exon

position:9074166:1
position: 9074166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9115721-9115775:1:exon

position:9115721:1
position: 9115721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9115775:1
position: 9115775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9122195-9122349:1:exon

position:9122195:1
position: 9122195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9122349:1
position: 9122349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9125500-9125650:1:exon

position:9125500:1
position: 9125500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9125650:1
position: 9125650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9125997-9126965:1:exon

position:9125997:1
position: 9125997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GGACT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: GGACT
product: gamma-glutamylamine cyclotransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_018056388.1
SIO_010081: GGACT
subclass of: SO_0000673
so part of: GGACT
location: join(9074091..9074166,9115721..9115775,9125500..9125650,9125997..9126965)
location: region:9074091-9126965:1
so has part: feature:9074091-9074166:1:exon
so has part: feature:9115721-9115775:1:exon
so has part: feature:9125500-9125650:1:exon
so has part: feature:9125997-9126965:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9074091-9074166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9115721-9115775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9125500-9125650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9125997-9126965:1:exon

GGACT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: GGACT
product: gamma-glutamylamine cyclotransferase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_018056392.1
SIO_010081: GGACT
subclass of: SO_0000673
so part of: GGACT
location: join(9078039..9078601,9115721..9115775,9122195..9122349,9125500..9125650,9125997..9126965)
location: region:9078039-9126965:1
so has part: feature:9078039-9078601:1:exon
so has part: feature:9115721-9115775:1:exon
so has part: feature:9122195-9122349:1:exon
so has part: feature:9125500-9125650:1:exon
so has part: feature:9125997-9126965:1:exon

position:9078039:1
position: 9078039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9078039-9078601:1:exon

position:9078601:1
position: 9078601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9115721-9115775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9122195-9122349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9125500-9125650:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9125997-9126965:1:exon

GGACT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: GGACT
product: gamma-glutamylamine cyclotransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_018056389.1
SIO_010081: GGACT
subclass of: SO_0000673
so part of: GGACT
location: join(9078039..9078601,9115721..9115775,9125500..9125650,9125997..9126965)
location: region:9078039-9126965:1
so has part: feature:9078039-9078601:1:exon
so has part: feature:9115721-9115775:1:exon
so has part: feature:9125500-9125650:1:exon
so has part: feature:9125997-9126965:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9078039-9078601:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9115721-9115775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9125500-9125650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9125997-9126965:1:exon

GGACT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: GGACT
product: gamma-glutamylamine cyclotransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018056390.1
SIO_010081: GGACT
subclass of: SO_0000673
so part of: GGACT
location: join(9093177..9093261,9115721..9115775,9125500..9125650,9125997..9126965)
location: region:9093177-9126965:1
so has part: feature:9093177-9093261:1:exon
so has part: feature:9115721-9115775:1:exon
so has part: feature:9125500-9125650:1:exon
so has part: feature:9125997-9126965:1:exon

position:9093177:1
position: 9093177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9093177-9093261:1:exon

position:9093261:1
position: 9093261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9115721-9115775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9125500-9125650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9125997-9126965:1:exon

GGACT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: GGACT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-glutamylaminecyclotransferase
translation: MPGPECKLSAETGAPCVTDDSSSCLVPVFVYGTLKTGQPNHQVLLDGAHGRAAFQGRACTLEPYPLVIAGEHNIPRLLNLPGRGHRVAGEVYQVDERMLRFLDEFEGCPDMYQRTRLHVAMEGARAPLECFVYTTATYPPEWVHLPYLDDYDSQGKHGLRYNPRENR
SIO_010081: GGACT
subclass of: SO_0000673
so part of: GGACT
location: join(9125589..9125650,9125997..9126438)
location: region:9125589-9126438:1
so has part: feature:9125589-9125650:1:exon
so has part: feature:9125997-9126438:1:exon

XP_017911877.1
type: Protein
SIO_000068: ncbiprotein

position:9125589:1
position: 9125589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9126438:1
position: 9126438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9125589-9125650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9125997-9126438:1:exon

GGACT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: GGACT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-glutamylaminecyclotransferase
translation: MPGPECKLSAETGAPCVTDDSSSCLVPVFVYGTLKTGQPNHQVLLDGAHGRAAFQGRACTLEPYPLVIAGEHNIPRLLNLPGRGHRVAGEVYQVDERMLRFLDEFEGCPDMYQRTRLHVAMEGARAPLECFVYTTATYPPEWVHLPYLDDYDSQGKHGLRYNPRENR
SIO_010081: GGACT
subclass of: SO_0000673
so part of: GGACT
location: join(9125589..9125650,9125997..9126438)
location: region:9125589-9126438:1
so has part: feature:9125589-9125650:1:exon
so has part: feature:9125997-9126438:1:exon

XP_017911878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9125589-9125650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9125997-9126438:1:exon

GGACT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: GGACT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-glutamylaminecyclotransferase
translation: MPGPECKLSAETGAPCVTDDSSSCLVPVFVYGTLKTGQPNHQVLLDGAHGRAAFQGRACTLEPYPLVIAGEHNIPRLLNLPGRGHRVAGEVYQVDERMLRFLDEFEGCPDMYQRTRLHVAMEGARAPLECFVYTTATYPPEWVHLPYLDDYDSQGKHGLRYNPRENR
SIO_010081: GGACT
subclass of: SO_0000673
so part of: GGACT
location: join(9125589..9125650,9125997..9126438)
location: region:9125589-9126438:1
so has part: feature:9125589-9125650:1:exon
so has part: feature:9125997-9126438:1:exon

XP_017911879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9125589-9125650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9125997-9126438:1:exon

GGACT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: GGACT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-glutamylaminecyclotransferase
translation: MPGPECKLSAETGAPCVTDDSSSCLVPVFVYGTLKTGQPNHQVLLDGAHGRAAFQGRACTLEPYPLVIAGEHNIPRLLNLPGRGHRVAGEVYQVDERMLRFLDEFEGCPDMYQRTRLHVAMEGARAPLECFVYTTATYPPEWVHLPYLDDYDSQGKHGLRYNPRENR
SIO_010081: GGACT
subclass of: SO_0000673
so part of: GGACT
location: join(9125589..9125650,9125997..9126438)
location: region:9125589-9126438:1
so has part: feature:9125589-9125650:1:exon
so has part: feature:9125997-9126438:1:exon

XP_017911880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9125589-9125650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9125997-9126438:1:exon

GGACT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: GGACT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-glutamylaminecyclotransferase
translation: MPGPECKLSAETGAPCVTDDSSSCLVPVFVYGTLKTGQPNHQVLLDGAHGRAAFQGRACTLEPYPLVIAGEHNIPRLLNLPGRGHRVAGEVYQVDERMLRFLDEFEGCPDMYQRTRLHVAMEGARAPLECFVYTTATYPPEWVHLPYLDDYDSQGKHGLRYNPRENR
SIO_010081: GGACT
subclass of: SO_0000673
so part of: GGACT
location: join(9125589..9125650,9125997..9126438)
location: region:9125589-9126438:1
so has part: feature:9125589-9125650:1:exon
so has part: feature:9125997-9126438:1:exon

XP_017911881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9125589-9125650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9125997-9126438:1:exon

PCCA
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: PCCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9127886..9506572)
location: region:9127886-9506572:-1
so has part: feature:9127886-9506572:-1:exon
subclass of: SO_0000010

102191627
type: Gene
SIO_000068: ncbigene

position:9127886:-1
position: 9127886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9506572:-1
position: 9506572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9127886-9506572:-1:exon

PCCA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: PCCA
product: propionyl-CoA carboxylase alpha subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 12 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_018056387.1
SIO_010081: PCCA
subclass of: SO_0000673
so part of: PCCA
location: complement(join(9127886..9128398,9131501..9131578,9142929..9143069,9200032..9200085,9218619..9218717,9253073..9253175,9278704..9278812,9289138..9289248,9311321..9311396,9313103..9313171,9317323..9317397,9318728..9318871,9337498..9337648,9339928..9340022,9344438..9344540,9354088..9354166,9377355..9377391,9400271..9400402,9442154..9442207,9444305..9444418,9484426..9484494,9484603..9484650,9491321..9491398,9506433..9506572))
location: region:9127886-9506572:-1
so has part: feature:9506433-9506572:-1:exon
so has part: feature:9491321-9491398:-1:exon
so has part: feature:9484603-9484650:-1:exon
so has part: feature:9484426-9484494:-1:exon
so has part: feature:9444305-9444418:-1:exon
so has part: feature:9442154-9442207:-1:exon
so has part: feature:9400271-9400402:-1:exon
so has part: feature:9377355-9377391:-1:exon
so has part: feature:9354088-9354166:-1:exon
so has part: feature:9344438-9344540:-1:exon
so has part: feature:9339928-9340022:-1:exon
so has part: feature:9337498-9337648:-1:exon
so has part: feature:9318728-9318871:-1:exon
so has part: feature:9317323-9317397:-1:exon
so has part: feature:9313103-9313171:-1:exon
so has part: feature:9311321-9311396:-1:exon
so has part: feature:9289138-9289248:-1:exon
so has part: feature:9278704-9278812:-1:exon
so has part: feature:9253073-9253175:-1:exon
so has part: feature:9218619-9218717:-1:exon
so has part: feature:9200032-9200085:-1:exon
so has part: feature:9142929-9143069:-1:exon
so has part: feature:9131501-9131578:-1:exon
so has part: feature:9127886-9128398:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9506433-9506572:-1:exon

position:9506433:-1
position: 9506433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9491321-9491398:-1:exon

position:9491321:-1
position: 9491321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9491398:-1
position: 9491398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9484603-9484650:-1:exon

position:9484603:-1
position: 9484603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9484650:-1
position: 9484650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9484426-9484494:-1:exon

position:9484426:-1
position: 9484426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9484494:-1
position: 9484494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9444305-9444418:-1:exon

position:9444305:-1
position: 9444305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9444418:-1
position: 9444418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9442154-9442207:-1:exon

position:9442154:-1
position: 9442154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9442207:-1
position: 9442207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9400271-9400402:-1:exon

position:9400271:-1
position: 9400271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9400402:-1
position: 9400402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9377355-9377391:-1:exon

position:9377355:-1
position: 9377355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9377391:-1
position: 9377391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9354088-9354166:-1:exon

position:9354088:-1
position: 9354088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9354166:-1
position: 9354166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9344438-9344540:-1:exon

position:9344438:-1
position: 9344438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9344540:-1
position: 9344540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9339928-9340022:-1:exon

position:9339928:-1
position: 9339928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9340022:-1
position: 9340022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9337498-9337648:-1:exon

position:9337498:-1
position: 9337498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9337648:-1
position: 9337648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9318728-9318871:-1:exon

position:9318728:-1
position: 9318728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9318871:-1
position: 9318871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9317323-9317397:-1:exon

position:9317323:-1
position: 9317323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9317397:-1
position: 9317397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9313103-9313171:-1:exon

position:9313103:-1
position: 9313103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9313171:-1
position: 9313171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9311321-9311396:-1:exon

position:9311321:-1
position: 9311321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9311396:-1
position: 9311396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9289138-9289248:-1:exon

position:9289138:-1
position: 9289138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9289248:-1
position: 9289248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9278704-9278812:-1:exon

position:9278704:-1
position: 9278704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9278812:-1
position: 9278812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9253073-9253175:-1:exon

position:9253073:-1
position: 9253073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9253175:-1
position: 9253175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9218619-9218717:-1:exon

position:9218619:-1
position: 9218619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9218717:-1
position: 9218717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9200032-9200085:-1:exon

position:9200032:-1
position: 9200032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9200085:-1
position: 9200085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:9142929-9143069:-1:exon

position:9142929:-1
position: 9142929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9143069:-1
position: 9143069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:9131501-9131578:-1:exon

position:9131501:-1
position: 9131501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9131578:-1
position: 9131578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:9127886-9128398:-1:exon

position:9128398:-1
position: 9128398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCCA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: PCCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: propionyl-CoA carboxylase alpha chain, mitochondrial
translation: MAGFWTGAAALATAGRRGRRWPQPLMRSVALWTVKHVPHYSRRYLVASRTLCSAGYDSNEKTFDKILIANRGEIACRVIKTCKKMGIKTVAIHSDVDASSVHVKMADEAVCVGPAPTSKSYLNMDAIMDAVRNTRAQAVHPGYGFLSENKEFAKRLAAEDVIFIGPDTHAIQAMGDKIESKLLAKKAKVNTIPGFDGVVKDADEAVRIAREIGYPVMIKASAGGGGKGMRIAWDDEETRDGFRFSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLGDKHGNALWLNERECSIQRRNQKVVEEAPSIFLDSETRRAMGEQAVALAKAVNYASAGTVEFLVDSKRNFYFLEMNTRLQVEHPVTECITGLDLVQEMIRVAKGYPLRHKQADIPINGWAVECRVYAEDPYKSFGLPSVGRLSQYEEPIRLPGVRVDSGIQPGSDISIYYDPMISKLITYGSDRTEALKRMEDALDNYVIRGVTHNIALLREVIINSRFIEGDINTKFLSDVYPDGFKGHQLTETERNQFLAVASSLFVASQLRAQHFQDHGNSRVPIVKPQVASWELSVKLHGEIHTVIASKSGPTFSVEVDGSKLNVTSTWNLASPLLSVNVDGTQRTIQCLSREAGGNMSIQFLGTVYKVRILTKLAAELHKFMLEKAAEDTSSILRSPMPGVVVAISVKPGDLVAEGQEICVIEAMKMQNSMTAGKTGKVKSVHCKAGDTVGEGDLLVELE
SIO_010081: PCCA
subclass of: SO_0000673
so part of: PCCA
location: complement(join(9128330..9128398,9131501..9131578,9142929..9143069,9200032..9200085,9218619..9218717,9253073..9253175,9278704..9278812,9289138..9289248,9311321..9311396,9313103..9313171,9317323..9317397,9318728..9318871,9337498..9337648,9339928..9340022,9344438..9344540,9354088..9354166,9377355..9377391,9400271..9400402,9442154..9442207,9444305..9444418,9484426..9484494,9484603..9484650,9491321..9491398,9506433..9506537))
location: region:9128330-9506537:-1
so has part: feature:9506433-9506537:-1:exon
so has part: feature:9491321-9491398:-1:exon
so has part: feature:9484603-9484650:-1:exon
so has part: feature:9484426-9484494:-1:exon
so has part: feature:9444305-9444418:-1:exon
so has part: feature:9442154-9442207:-1:exon
so has part: feature:9400271-9400402:-1:exon
so has part: feature:9377355-9377391:-1:exon
so has part: feature:9354088-9354166:-1:exon
so has part: feature:9344438-9344540:-1:exon
so has part: feature:9339928-9340022:-1:exon
so has part: feature:9337498-9337648:-1:exon
so has part: feature:9318728-9318871:-1:exon
so has part: feature:9317323-9317397:-1:exon
so has part: feature:9313103-9313171:-1:exon
so has part: feature:9311321-9311396:-1:exon
so has part: feature:9289138-9289248:-1:exon
so has part: feature:9278704-9278812:-1:exon
so has part: feature:9253073-9253175:-1:exon
so has part: feature:9218619-9218717:-1:exon
so has part: feature:9200032-9200085:-1:exon
so has part: feature:9142929-9143069:-1:exon
so has part: feature:9131501-9131578:-1:exon
so has part: feature:9128330-9128398:-1:exon

XP_017911876.1
type: Protein
SIO_000068: ncbiprotein

position:9128330:-1
position: 9128330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9506537:-1
position: 9506537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9506433-9506537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9491321-9491398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9484603-9484650:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9484426-9484494:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9444305-9444418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9442154-9442207:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9400271-9400402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9377355-9377391:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9354088-9354166:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9344438-9344540:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9339928-9340022:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9337498-9337648:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9318728-9318871:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9317323-9317397:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9313103-9313171:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9311321-9311396:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9289138-9289248:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9278704-9278812:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9253073-9253175:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9218619-9218717:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9200032-9200085:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9142929-9143069:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9131501-9131578:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9128330-9128398:-1:exon

LOC102191345
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102191345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9522375..9523805
location: region:9522375-9523805:1
so has part: feature:9522375-9523805:1:exon

102191345
type: Gene
SIO_000068: ncbigene

position:9522375:1
position: 9522375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9523805:1
position: 9523805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9522375-9523805:1:exon

LOC102191345
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102191345
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC102191345
subclass of: SO_0000673
so part of: LOC102191345
location: 9522375..9522449
location: region:9522375-9522449:1
so has part: feature:9522375-9522449:1:exon

position:9522449:1
position: 9522449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9522375-9522449:1:exon

LOC102191345
type: Exon
subclass of: SO_0000147
RO_0002162: 9925
gene: LOC102191345
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC102191345
subclass of: SO_0000673
so part of: LOC102191345
location: 9523133..9523805
location: region:9523133-9523805:1
so has part: feature:9523133-9523805:1:exon

position:9523133:1
position: 9523133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9523133-9523805:1:exon

ZIC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ZIC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9572258..9577257)
location: region:9572258-9577257:-1
so has part: feature:9572258-9577257:-1:exon
subclass of: SO_0000010

102191060
type: Gene
SIO_000068: ncbigene

position:9572258:-1
position: 9572258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9577257:-1
position: 9577257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9572258-9577257:-1:exon

ZIC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZIC2
product: Zic family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 36 ESTs, 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_018056393.1
SIO_010081: ZIC2
subclass of: SO_0000673
so part of: ZIC2
location: complement(join(9572258..9573680,9573884..9574047,9575874..9577257))
location: region:9572258-9577257:-1
so has part: feature:9575874-9577257:-1:exon
so has part: feature:9573884-9574047:-1:exon
so has part: feature:9572258-9573680:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9575874-9577257:-1:exon

position:9575874:-1
position: 9575874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9573884-9574047:-1:exon

position:9573884:-1
position: 9573884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9574047:-1
position: 9574047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9572258-9573680:-1:exon

position:9573680:-1
position: 9573680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZIC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZIC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 2 isoform X1
translation: MLLDAGPQFPAIGVGSFARHHHHSAAAAAAAAAEMQDRELSLAAAQNGFVDSAAAHMGAFKLNPGAHELSPGQSSAFTSQGPGAYPGSAAAAAAAAALGPHAAHVGSYSGPPFNSTRDFLFRSRGFGDSAPGGGQHGLFGPGAGGLHHAHSDAQGHLLFPGLPEQHGPHGSQNVLNGQMRLGLPGEVFGRSEQYRQVASPRTDPYSAAQLHNQYGPMNMNMGMNMAAAAAHHHHHHHHPGAFFRYMRQQCIKQELICKWIDPEQLSNPKKSCNKTFSTMHELVTHVSVEHVGGPEQSNHVCFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFQCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSYTHPSSLRKHMKVHESSPQGSESSPAASSGYESSTPPGLVSPSAEPQSSSTLSPAAAAAAAAAAAAAAAVSAVHRSGGAGSGSGGGGGGGGGGGGGGGAGGGGGGSGGGSGTAGGHGGLSSNFNEWYV
SIO_010081: ZIC2
subclass of: SO_0000673
so part of: ZIC2
location: complement(join(9573330..9573680,9573884..9574047,9575874..9576945))
location: region:9573330-9576945:-1
so has part: feature:9575874-9576945:-1:exon
so has part: feature:9573884-9574047:-1:exon
so has part: feature:9573330-9573680:-1:exon

XP_017911882.1
type: Protein
SIO_000068: ncbiprotein

position:9573330:-1
position: 9573330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9576945:-1
position: 9576945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9575874-9576945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9573884-9574047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9573330-9573680:-1:exon

ZIC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZIC2
product: Zic family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018056394.1
SIO_010081: ZIC2
subclass of: SO_0000673
so part of: ZIC2
location: complement(join(9573588..9573717,9573884..9574047,9575874..9577257))
location: region:9573588-9577257:-1
so has part: feature:9575874-9577257:-1:exon
so has part: feature:9573884-9574047:-1:exon
so has part: feature:9573588-9573717:-1:exon

position:9573588:-1
position: 9573588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9575874-9577257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9573884-9574047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9573588-9573717:-1:exon

position:9573717:-1
position: 9573717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZIC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZIC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 2 isoform X2
translation: MLLDAGPQFPAIGVGSFARHHHHSAAAAAAAAAEMQDRELSLAAAQNGFVDSAAAHMGAFKLNPGAHELSPGQSSAFTSQGPGAYPGSAAAAAAAAALGPHAAHVGSYSGPPFNSTRDFLFRSRGFGDSAPGGGQHGLFGPGAGGLHHAHSDAQGHLLFPGLPEQHGPHGSQNVLNGQMRLGLPGEVFGRSEQYRQVASPRTDPYSAAQLHNQYGPMNMNMGMNMAAAAAHHHHHHHHPGAFFRYMRQQCIKQELICKWIDPEQLSNPKKSCNKTFSTMHELVTHVSVEHVGGPEQSNHVCFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFQCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSYTHPSSLRKHMKSPLVSPPGFCLAGP
SIO_010081: ZIC2
subclass of: SO_0000673
so part of: ZIC2
location: complement(join(9573673..9573717,9573884..9574047,9575874..9576945))
location: region:9573673-9576945:-1
so has part: feature:9575874-9576945:-1:exon
so has part: feature:9573884-9574047:-1:exon
so has part: feature:9573673-9573717:-1:exon

XP_017911883.1
type: Protein
SIO_000068: ncbiprotein

position:9573673:-1
position: 9573673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9575874-9576945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9573884-9574047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9573673-9573717:-1:exon

ZIC5
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: ZIC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9587251..9596026
location: region:9587251-9596026:1
so has part: feature:9587251-9596026:1:exon
subclass of: SO_0000010

102190799
type: Gene
SIO_000068: ncbigene

position:9587251:1
position: 9587251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9596026:1
position: 9596026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9587251-9596026:1:exon

ZIC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: ZIC5
product: Zic family member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 3 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_018056395.1
SIO_010081: ZIC5
subclass of: SO_0000673
so part of: ZIC5
location: join(9587251..9588910,9593285..9596026)
location: region:9587251-9596026:1
so has part: feature:9587251-9588910:1:exon
so has part: feature:9593285-9596026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9587251-9588910:1:exon

position:9588910:1
position: 9588910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9593285-9596026:1:exon

position:9593285:1
position: 9593285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZIC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: ZIC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 5
translation: MFLRAGRGGKKLPPGRVRGSDCVALMEPPLSKRNPSAPRLADPAAARAWPLQNMTGFPALASAPAHSRVRVAAAHLRPRDPGTDPGVARAPLRPEHMAQASAPDPSPPSQALPAPPESPAAAARAAASAVHPGARTAPGGGGARGGPSPAPPPPAPPPPPPSPSPPPPPPPPPTPPPPALSGYTTTNSGGGGSSGKGHSRDFVLRRDLSATAPAAAMHGAPLGGEPRSGPGSPQHPAPPPASGGMFISASGTYAGPDGGGGGGGPALFPSLHEPPGGSGGHPHPLNGQMRLGLAAAAAAAAAAELYGRAEPPFAPRSGDAHYGAVAAAAAAALHGYGAVNLNLNLAAAAAAAAAAAAATGPGPHLQHHAPPPAPPPPPAPAQQPPHLPGAAGAFLRYMRQPIKQELICKWIDPEELAGPPPPPPAGGSKPCSKTFGTMHELVNHVTVEHVGGPEQSSHVCFWEDCPREGKPFKAKYKLINHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCEFDGCDRKFANSSDRKKHSHVHTSDKPYYCKVRGCDKSYTHPSSLRKHMKIHCKSPPPSPGALGYSSVGTPVGAPVSPVLDPTRSRSSTLSPQVTNLNEWYVCQAGGAPSHLHAPSSNGTTSESDDEDMYANPEVVRTIH
SIO_010081: ZIC5
subclass of: SO_0000673
so part of: ZIC5
location: join(9587362..9588910,9593285..9593727)
location: region:9587362-9593727:1
so has part: feature:9587362-9588910:1:exon
so has part: feature:9593285-9593727:1:exon

XP_017911884.1
type: Protein
SIO_000068: ncbiprotein

position:9587362:1
position: 9587362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9593727:1
position: 9593727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9587362-9588910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9593285-9593727:1:exon

CLYBL
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: CLYBL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9645150..9878794)
location: region:9645150-9878794:-1
so has part: feature:9645150-9878794:-1:exon
subclass of: SO_0000010

102190529
type: Gene
SIO_000068: ncbigene

position:9645150:-1
position: 9645150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9878794:-1
position: 9878794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9645150-9878794:-1:exon

CLYBL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9925
gene: CLYBL
product: citrate lyase beta like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001918925.1
SIO_010081: CLYBL
so part of: CLYBL
location: complement(join(9645150..9646767,9647520..9649934,9655975..9656094,9674877..9675001,9679662..9679829,9681171..9681264,9682965..9683066,9687008..9687196,9756282..9756468,9878703..9878794))
location: region:9645150-9878794:-1
so has part: feature:9878703-9878794:-1:exon
so has part: feature:9756282-9756468:-1:exon
so has part: feature:9687008-9687196:-1:exon
so has part: feature:9682965-9683066:-1:exon
so has part: feature:9681171-9681264:-1:exon
so has part: feature:9679662-9679829:-1:exon
so has part: feature:9674877-9675001:-1:exon
so has part: feature:9655975-9656094:-1:exon
so has part: feature:9647520-9649934:-1:exon
so has part: feature:9645150-9646767:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9878703-9878794:-1:exon

position:9878703:-1
position: 9878703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9756282-9756468:-1:exon

position:9756282:-1
position: 9756282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9756468:-1
position: 9756468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9687008-9687196:-1:exon

position:9687008:-1
position: 9687008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9687196:-1
position: 9687196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9682965-9683066:-1:exon

position:9682965:-1
position: 9682965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9683066:-1
position: 9683066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9681171-9681264:-1:exon

position:9681171:-1
position: 9681171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9681264:-1
position: 9681264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9679662-9679829:-1:exon

position:9679662:-1
position: 9679662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9679829:-1
position: 9679829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9674877-9675001:-1:exon

position:9674877:-1
position: 9674877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9675001:-1
position: 9675001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9655975-9656094:-1:exon

position:9655975:-1
position: 9655975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9656094:-1
position: 9656094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9647520-9649934:-1:exon

position:9647520:-1
position: 9647520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9649934:-1
position: 9649934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9645150-9646767:-1:exon

position:9646767:-1
position: 9646767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLYBL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CLYBL
product: citrate lyase beta like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_018056399.1
SIO_010081: CLYBL
subclass of: SO_0000673
so part of: CLYBL
location: complement(join(9645150..9649934,9655975..9656094,9674877..9675001,9679662..9679829,9681171..9681264,9682965..9683066,9687008..9687196,9756282..9756468,9878703..9878794))
location: region:9645150-9878794:-1
so has part: feature:9878703-9878794:-1:exon
so has part: feature:9756282-9756468:-1:exon
so has part: feature:9687008-9687196:-1:exon
so has part: feature:9682965-9683066:-1:exon
so has part: feature:9681171-9681264:-1:exon
so has part: feature:9679662-9679829:-1:exon
so has part: feature:9674877-9675001:-1:exon
so has part: feature:9655975-9656094:-1:exon
so has part: feature:9645150-9649934:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9878703-9878794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9756282-9756468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9687008-9687196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9682965-9683066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9681171-9681264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9679662-9679829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9674877-9675001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9655975-9656094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9645150-9649934:-1:exon

CLYBL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CLYBL
product: citrate lyase beta like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_018056397.1
SIO_010081: CLYBL
subclass of: SO_0000673
so part of: CLYBL
location: complement(join(9654821..9654947,9655975..9656094,9674877..9675001,9679662..9679829,9681171..9681264,9682965..9683066,9687008..9687196,9756282..9756468,9878703..9878794))
location: region:9654821-9878794:-1
so has part: feature:9878703-9878794:-1:exon
so has part: feature:9756282-9756468:-1:exon
so has part: feature:9687008-9687196:-1:exon
so has part: feature:9682965-9683066:-1:exon
so has part: feature:9681171-9681264:-1:exon
so has part: feature:9679662-9679829:-1:exon
so has part: feature:9674877-9675001:-1:exon
so has part: feature:9655975-9656094:-1:exon
so has part: feature:9654821-9654947:-1:exon

position:9654821:-1
position: 9654821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9878703-9878794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9756282-9756468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9687008-9687196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9682965-9683066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9681171-9681264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9679662-9679829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9674877-9675001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9655975-9656094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9654821-9654947:-1:exon

position:9654947:-1
position: 9654947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLYBL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CLYBL
product: citrate lyase beta like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_018056398.1
SIO_010081: CLYBL
subclass of: SO_0000673
so part of: CLYBL
location: complement(join(9654821..9654967,9655975..9656094,9674877..9675001,9679662..9679829,9681171..9681264,9682965..9683066,9687008..9687196,9756282..9756468,9878703..9878794))
location: region:9654821-9878794:-1
so has part: feature:9878703-9878794:-1:exon
so has part: feature:9756282-9756468:-1:exon
so has part: feature:9687008-9687196:-1:exon
so has part: feature:9682965-9683066:-1:exon
so has part: feature:9681171-9681264:-1:exon
so has part: feature:9679662-9679829:-1:exon
so has part: feature:9674877-9675001:-1:exon
so has part: feature:9655975-9656094:-1:exon
so has part: feature:9654821-9654967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9878703-9878794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9756282-9756468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9687008-9687196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9682965-9683066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9681171-9681264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9679662-9679829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9674877-9675001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9655975-9656094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9654821-9654967:-1:exon

position:9654967:-1
position: 9654967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLYBL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CLYBL
product: citrate lyase beta like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_018056396.1
SIO_010081: CLYBL
subclass of: SO_0000673
so part of: CLYBL
location: complement(join(9654821..9656094,9674877..9675001,9679662..9679829,9681171..9681264,9682965..9683066,9687008..9687196,9756282..9756468,9878703..9878794))
location: region:9654821-9878794:-1
so has part: feature:9878703-9878794:-1:exon
so has part: feature:9756282-9756468:-1:exon
so has part: feature:9687008-9687196:-1:exon
so has part: feature:9682965-9683066:-1:exon
so has part: feature:9681171-9681264:-1:exon
so has part: feature:9679662-9679829:-1:exon
so has part: feature:9674877-9675001:-1:exon
so has part: feature:9654821-9656094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9878703-9878794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9756282-9756468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9687008-9687196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9682965-9683066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9681171-9681264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9679662-9679829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9674877-9675001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9654821-9656094:-1:exon

CLYBL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: CLYBL
product: citrate lyase beta like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_018056400.1
SIO_010081: CLYBL
subclass of: SO_0000673
so part of: CLYBL
location: complement(join(9654821..9656094,9674877..9675001,9679662..9679829,9681171..9681264,9682965..9683066,9687008..9687196,9713866..9713948))
location: region:9654821-9713948:-1
so has part: feature:9713866-9713948:-1:exon
so has part: feature:9687008-9687196:-1:exon
so has part: feature:9682965-9683066:-1:exon
so has part: feature:9681171-9681264:-1:exon
so has part: feature:9679662-9679829:-1:exon
so has part: feature:9674877-9675001:-1:exon
so has part: feature:9654821-9656094:-1:exon

position:9713948:-1
position: 9713948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9713866-9713948:-1:exon

position:9713866:-1
position: 9713866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9687008-9687196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9682965-9683066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9681171-9681264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9679662-9679829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9674877-9675001:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9654821-9656094:-1:exon

CLYBL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CLYBL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: citrate lyase subunit beta-like protein, mitochondrial isoform X1
translation: MAQRLLRRAARGATAAALPRLKASLAADVSRLGCSSSLSHKYIPRRAVLYVPGNDEKKINKIPSLNVDCAVLDCEDGVAVNKKDEARLRIVKTLEDFDLGPTEKCVRINSVSSGLAEEDLEAILQSRVLPSSLMLPKVEGPEEIHWFTDKFSFYLKDRKLEQPMNLIPFVETAMGLLNFKAVCEEAVKNGPQVGLFLDAVVFGGEDFRASIGATSSKETQDILYARQKIIVVAKAFGLQAIDLVYIDFRDEEGLLRQSREGAAMGFTGKQVIHPNQIAVVQEQFSPSAEKIKWAEELIAAFKEHQQLGKGAFTFRGSMIDMPLLKQAQNIVTLATSIKEK
SIO_010081: CLYBL
subclass of: SO_0000673
so part of: CLYBL
location: complement(join(9655999..9656094,9674877..9675001,9679662..9679829,9681171..9681264,9682965..9683066,9687008..9687196,9756282..9756468,9878703..9878764))
location: region:9655999-9878764:-1
so has part: feature:9878703-9878764:-1:exon
so has part: feature:9756282-9756468:-1:exon
so has part: feature:9687008-9687196:-1:exon
so has part: feature:9682965-9683066:-1:exon
so has part: feature:9681171-9681264:-1:exon
so has part: feature:9679662-9679829:-1:exon
so has part: feature:9674877-9675001:-1:exon
so has part: feature:9655999-9656094:-1:exon

XP_017911885.1
type: Protein
SIO_000068: ncbiprotein

position:9655999:-1
position: 9655999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9878764:-1
position: 9878764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9878703-9878764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9756282-9756468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9687008-9687196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9682965-9683066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9681171-9681264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9679662-9679829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9674877-9675001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9655999-9656094:-1:exon

CLYBL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CLYBL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: citrate lyase subunit beta-like protein, mitochondrial isoform X1
translation: MAQRLLRRAARGATAAALPRLKASLAADVSRLGCSSSLSHKYIPRRAVLYVPGNDEKKINKIPSLNVDCAVLDCEDGVAVNKKDEARLRIVKTLEDFDLGPTEKCVRINSVSSGLAEEDLEAILQSRVLPSSLMLPKVEGPEEIHWFTDKFSFYLKDRKLEQPMNLIPFVETAMGLLNFKAVCEEAVKNGPQVGLFLDAVVFGGEDFRASIGATSSKETQDILYARQKIIVVAKAFGLQAIDLVYIDFRDEEGLLRQSREGAAMGFTGKQVIHPNQIAVVQEQFSPSAEKIKWAEELIAAFKEHQQLGKGAFTFRGSMIDMPLLKQAQNIVTLATSIKEK
SIO_010081: CLYBL
subclass of: SO_0000673
so part of: CLYBL
location: complement(join(9655999..9656094,9674877..9675001,9679662..9679829,9681171..9681264,9682965..9683066,9687008..9687196,9756282..9756468,9878703..9878764))
location: region:9655999-9878764:-1
so has part: feature:9878703-9878764:-1:exon
so has part: feature:9756282-9756468:-1:exon
so has part: feature:9687008-9687196:-1:exon
so has part: feature:9682965-9683066:-1:exon
so has part: feature:9681171-9681264:-1:exon
so has part: feature:9679662-9679829:-1:exon
so has part: feature:9674877-9675001:-1:exon
so has part: feature:9655999-9656094:-1:exon

XP_017911886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9878703-9878764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9756282-9756468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9687008-9687196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9682965-9683066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9681171-9681264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9679662-9679829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9674877-9675001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9655999-9656094:-1:exon

CLYBL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CLYBL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: citrate lyase subunit beta-like protein, mitochondrial isoform X1
translation: MAQRLLRRAARGATAAALPRLKASLAADVSRLGCSSSLSHKYIPRRAVLYVPGNDEKKINKIPSLNVDCAVLDCEDGVAVNKKDEARLRIVKTLEDFDLGPTEKCVRINSVSSGLAEEDLEAILQSRVLPSSLMLPKVEGPEEIHWFTDKFSFYLKDRKLEQPMNLIPFVETAMGLLNFKAVCEEAVKNGPQVGLFLDAVVFGGEDFRASIGATSSKETQDILYARQKIIVVAKAFGLQAIDLVYIDFRDEEGLLRQSREGAAMGFTGKQVIHPNQIAVVQEQFSPSAEKIKWAEELIAAFKEHQQLGKGAFTFRGSMIDMPLLKQAQNIVTLATSIKEK
SIO_010081: CLYBL
subclass of: SO_0000673
so part of: CLYBL
location: complement(join(9655999..9656094,9674877..9675001,9679662..9679829,9681171..9681264,9682965..9683066,9687008..9687196,9756282..9756468,9878703..9878764))
location: region:9655999-9878764:-1
so has part: feature:9878703-9878764:-1:exon
so has part: feature:9756282-9756468:-1:exon
so has part: feature:9687008-9687196:-1:exon
so has part: feature:9682965-9683066:-1:exon
so has part: feature:9681171-9681264:-1:exon
so has part: feature:9679662-9679829:-1:exon
so has part: feature:9674877-9675001:-1:exon
so has part: feature:9655999-9656094:-1:exon

XP_017911887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9878703-9878764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9756282-9756468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9687008-9687196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9682965-9683066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9681171-9681264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9679662-9679829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9674877-9675001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9655999-9656094:-1:exon

CLYBL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CLYBL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: citrate lyase subunit beta-like protein, mitochondrial isoform X1
translation: MAQRLLRRAARGATAAALPRLKASLAADVSRLGCSSSLSHKYIPRRAVLYVPGNDEKKINKIPSLNVDCAVLDCEDGVAVNKKDEARLRIVKTLEDFDLGPTEKCVRINSVSSGLAEEDLEAILQSRVLPSSLMLPKVEGPEEIHWFTDKFSFYLKDRKLEQPMNLIPFVETAMGLLNFKAVCEEAVKNGPQVGLFLDAVVFGGEDFRASIGATSSKETQDILYARQKIIVVAKAFGLQAIDLVYIDFRDEEGLLRQSREGAAMGFTGKQVIHPNQIAVVQEQFSPSAEKIKWAEELIAAFKEHQQLGKGAFTFRGSMIDMPLLKQAQNIVTLATSIKEK
SIO_010081: CLYBL
subclass of: SO_0000673
so part of: CLYBL
location: complement(join(9655999..9656094,9674877..9675001,9679662..9679829,9681171..9681264,9682965..9683066,9687008..9687196,9756282..9756468,9878703..9878764))
location: region:9655999-9878764:-1
so has part: feature:9878703-9878764:-1:exon
so has part: feature:9756282-9756468:-1:exon
so has part: feature:9687008-9687196:-1:exon
so has part: feature:9682965-9683066:-1:exon
so has part: feature:9681171-9681264:-1:exon
so has part: feature:9679662-9679829:-1:exon
so has part: feature:9674877-9675001:-1:exon
so has part: feature:9655999-9656094:-1:exon

XP_017911888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9878703-9878764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9756282-9756468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9687008-9687196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9682965-9683066:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9681171-9681264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9679662-9679829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9674877-9675001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9655999-9656094:-1:exon

CLYBL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: CLYBL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: citrate lyase subunit beta-like protein, mitochondrial isoform X2
translation: MHREQSKNPSLDSEPAHHRDEARLRIVKTLEDFDLGPTEKCVRINSVSSGLAEEDLEAILQSRVLPSSLMLPKVEGPEEIHWFTDKFSFYLKDRKLEQPMNLIPFVETAMGLLNFKAVCEEAVKNGPQVGLFLDAVVFGGEDFRASIGATSSKETQDILYARQKIIVVAKAFGLQAIDLVYIDFRDEEGLLRQSREGAAMGFTGKQVIHPNQIAVVQEQFSPSAEKIKWAEELIAAFKEHQQLGKGAFTFRGSMIDMPLLKQAQNIVTLATSIKEK
SIO_010081: CLYBL
subclass of: SO_0000673
so part of: CLYBL
location: complement(join(9655999..9656094,9674877..9675001,9679662..9679829,9681171..9681264,9682965..9683066,9687008..9687196,9713866..9713922))
location: region:9655999-9713922:-1
so has part: feature:9713866-9713922:-1:exon
so has part: feature:9687008-9687196:-1:exon
so has part: feature:9682965-9683066:-1:exon
so has part: feature:9681171-9681264:-1:exon
so has part: feature:9679662-9679829:-1:exon
so has part: feature:9674877-9675001:-1:exon
so has part: feature:9655999-9656094:-1:exon

XP_017911889.1
type: Protein
SIO_000068: ncbiprotein

position:9713922:-1
position: 9713922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9713866-9713922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9687008-9687196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9682965-9683066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9681171-9681264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9679662-9679829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9674877-9675001:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9655999-9656094:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(9906756..9906828)
location: region:9906756-9906828:-1
so has part: feature:9906756-9906828:-1:exon
subclass of: SO_0000663

108637331
type: Gene
SIO_000068: ncbigene

position:9906756:-1
position: 9906756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9906828:-1
position: 9906828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9906756-9906828:-1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9925
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(9906793..9906795),aa:Gly, seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: complement(9906756..9906828)
location: region:9906756-9906828:-1
so has part: feature:9906756-9906828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9906756-9906828:-1:exon

TM9SF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: TM9SF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9916049..9966298)
location: region:9916049-9966298:-1
so has part: feature:9916049-9966298:-1:exon
subclass of: SO_0000010

102190241
type: Gene
SIO_000068: ncbigene

position:9916049:-1
position: 9916049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9966298:-1
position: 9966298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9916049-9966298:-1:exon

TM9SF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: TM9SF2
product: transmembrane 9 superfamily member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 105 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_018056401.1
SIO_010081: TM9SF2
subclass of: SO_0000673
so part of: TM9SF2
location: complement(join(9916049..9916748,9919722..9919893,9921808..9921919,9922966..9923117,9924857..9925016,9925602..9925659,9928280..9928399,9930726..9930858,9934788..9934896,9935679..9935758,9937301..9937412,9938373..9938497,9939811..9939940,9944383..9944510,9947826..9947919,9949614..9949681,9965944..9966298))
location: region:9916049-9966298:-1
so has part: feature:9965944-9966298:-1:exon
so has part: feature:9949614-9949681:-1:exon
so has part: feature:9947826-9947919:-1:exon
so has part: feature:9944383-9944510:-1:exon
so has part: feature:9939811-9939940:-1:exon
so has part: feature:9938373-9938497:-1:exon
so has part: feature:9937301-9937412:-1:exon
so has part: feature:9935679-9935758:-1:exon
so has part: feature:9934788-9934896:-1:exon
so has part: feature:9930726-9930858:-1:exon
so has part: feature:9928280-9928399:-1:exon
so has part: feature:9925602-9925659:-1:exon
so has part: feature:9924857-9925016:-1:exon
so has part: feature:9922966-9923117:-1:exon
so has part: feature:9921808-9921919:-1:exon
so has part: feature:9919722-9919893:-1:exon
so has part: feature:9916049-9916748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9965944-9966298:-1:exon

position:9965944:-1
position: 9965944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9949614-9949681:-1:exon

position:9949614:-1
position: 9949614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9949681:-1
position: 9949681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9947826-9947919:-1:exon

position:9947826:-1
position: 9947826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9947919:-1
position: 9947919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9944383-9944510:-1:exon

position:9944383:-1
position: 9944383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9944510:-1
position: 9944510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9939811-9939940:-1:exon

position:9939811:-1
position: 9939811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9939940:-1
position: 9939940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9938373-9938497:-1:exon

position:9938373:-1
position: 9938373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9938497:-1
position: 9938497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9937301-9937412:-1:exon

position:9937301:-1
position: 9937301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9937412:-1
position: 9937412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9935679-9935758:-1:exon

position:9935679:-1
position: 9935679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9935758:-1
position: 9935758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9934788-9934896:-1:exon

position:9934788:-1
position: 9934788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9934896:-1
position: 9934896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9930726-9930858:-1:exon

position:9930726:-1
position: 9930726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9930858:-1
position: 9930858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9928280-9928399:-1:exon

position:9928280:-1
position: 9928280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9928399:-1
position: 9928399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9925602-9925659:-1:exon

position:9925602:-1
position: 9925602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9925659:-1
position: 9925659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9924857-9925016:-1:exon

position:9924857:-1
position: 9924857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9925016:-1
position: 9925016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9922966-9923117:-1:exon

position:9922966:-1
position: 9922966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9923117:-1
position: 9923117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9921808-9921919:-1:exon

position:9921808:-1
position: 9921808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9921919:-1
position: 9921919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9919722-9919893:-1:exon

position:9919722:-1
position: 9919722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9919893:-1
position: 9919893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9916049-9916748:-1:exon

position:9916748:-1
position: 9916748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TM9SF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: TM9SF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 9 superfamily member 2
translation: MSARLPAPCPPRWWLLLSLLLLGAAPGPRRGAAFYLPGLAPVNFCEDEKKSDECKAEIELFVNRLDSVESVLPYEYTAFDFCQASEGKRPSENLGQVLFGERIEPSPYKFTFKKEETCKLVCTKTYHTEKAEDKQKLEFLKKSMLLNYQHHWIVDNMPVTWCYDVEDGQRFCNPGFPIGCYITDKGHAKDACVINSEFHERDTFYIFNHVDIKIYYHVVETGSMGARLVAAKLEPKSFKHTHIDKPDCSGPPMDISNKASGEIKVAYTYSISFEEEKNIRWASRWDYILESMPHTHIQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGEKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD
SIO_010081: TM9SF2
subclass of: SO_0000673
so part of: TM9SF2
location: complement(join(9916681..9916748,9919722..9919893,9921808..9921919,9922966..9923117,9924857..9925016,9925602..9925659,9928280..9928399,9930726..9930858,9934788..9934896,9935679..9935758,9937301..9937412,9938373..9938497,9939811..9939940,9944383..9944510,9947826..9947919,9949614..9949681,9965944..9966108))
location: region:9916681-9966108:-1
so has part: feature:9965944-9966108:-1:exon
so has part: feature:9949614-9949681:-1:exon
so has part: feature:9947826-9947919:-1:exon
so has part: feature:9944383-9944510:-1:exon
so has part: feature:9939811-9939940:-1:exon
so has part: feature:9938373-9938497:-1:exon
so has part: feature:9937301-9937412:-1:exon
so has part: feature:9935679-9935758:-1:exon
so has part: feature:9934788-9934896:-1:exon
so has part: feature:9930726-9930858:-1:exon
so has part: feature:9928280-9928399:-1:exon
so has part: feature:9925602-9925659:-1:exon
so has part: feature:9924857-9925016:-1:exon
so has part: feature:9922966-9923117:-1:exon
so has part: feature:9921808-9921919:-1:exon
so has part: feature:9919722-9919893:-1:exon
so has part: feature:9916681-9916748:-1:exon

XP_017911890.1
type: Protein
SIO_000068: ncbiprotein

position:9916681:-1
position: 9916681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9966108:-1
position: 9966108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9965944-9966108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9949614-9949681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9947826-9947919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9944383-9944510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9939811-9939940:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9938373-9938497:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9937301-9937412:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9935679-9935758:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9934788-9934896:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9930726-9930858:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9928280-9928399:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9925602-9925659:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9924857-9925016:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9922966-9923117:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9921808-9921919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9919722-9919893:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9916681-9916748:-1:exon

LOC108637269
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC108637269
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9967102..9969408)
location: region:9967102-9969408:-1
so has part: feature:9967102-9969408:-1:exon
subclass of: SO_0000011

108637269
type: Gene
SIO_000068: ncbigene

position:9967102:-1
position: 9967102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9969408:-1
position: 9969408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9967102-9969408:-1:exon

LOC108637269
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9925
nc RNA class: lncRNA
gene: LOC108637269
product: uncharacterized LOC108637269
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_001918913.1
SIO_010081: LOC108637269
subclass of: SO_0000673
so part of: LOC108637269
location: complement(join(9967102..9967524,9969260..9969408))
location: region:9967102-9969408:-1
so has part: feature:9969260-9969408:-1:exon
so has part: feature:9967102-9967524:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9969260-9969408:-1:exon

position:9969260:-1
position: 9969260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9967102-9967524:-1:exon

position:9967524:-1
position: 9967524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102178740
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: LOC102178740
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10043144..10044653
location: region:10043144-10044653:1
so has part: feature:10043144-10044653:1:exon
subclass of: SO_0000010

102178740
type: Gene
SIO_000068: ncbigene

position:10043144:1
position: 10043144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10044653:1
position: 10044653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10043144-10044653:1:exon

LOC102178740
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: LOC102178740
product: G-protein coupled receptor 183-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein
transcript id: XM_005687726.3
SIO_010081: LOC102178740
subclass of: SO_0000673
so part of: LOC102178740
location: join(10043144..10043623,10043978..10044653)
location: region:10043144-10044653:1
so has part: feature:10043144-10043623:1:exon
so has part: feature:10043978-10044653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10043144-10043623:1:exon

position:10043623:1
position: 10043623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10043978-10044653:1:exon

position:10043978:1
position: 10043978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102178740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9925
gene: LOC102178740
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 183-like
translation: MASSTADPSNLVHHTNSCLPHHPPRVASVMLSLFYTALLIFAVLGNVLALRLAYQKDKKINSTDVFLVHLAVSDLLFTLTLPGKITYFLLDFNWPFGEGFCRLTAFIFFVNTYSGIYLMTCVSVDRYLAVVRAHQCPRLREPGWAQLICAAVWVLATLQTRVFKLCLQLTVCLMNLNCSIDPVAYFFASSRYRKWLRHFLKLKASPSSPSSPQGKASSETQSINQTGGSLPLEENEV
SIO_010081: LOC102178740
subclass of: SO_0000673
so part of: LOC102178740
location: join(10043144..10043623,10043978..10044211)
location: region:10043144-10044211:1
so has part: feature:10043144-10043623:1:exon
so has part: feature:10043978-10044211:1:exon

XP_005687783.2
type: Protein
SIO_000068: ncbiprotein

position:10044211:1
position: 10044211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10043144-10043623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10043978-10044211:1:exon

UBAC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9925
gene: UBAC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10054141..10225872)
location: region:10054141-10225872:-1
so has part: feature:10054141-10225872:-1:exon
subclass of: SO_0000010

102178459
type: Gene
SIO_000068: ncbigene

position:10054141:-1
position: 10054141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10225872:-1
position: 10225872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10054141-10225872:-1:exon

UBAC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9925
gene: UBAC2
product: UBA domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 32 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_018056404.1
SIO_010081: UBAC2
subclass of: SO_0000673
so part of: UBAC2
location: complement(join(10054141..10055358,10070224..10070346,10095886..10096131,10117044..10117091,10120524..10120647,10192503..10192612,10193146..10193265,10195654..10195781,10225748..10225872))
location: region:10054141-10225872:-1
so has part: feature:10225748-10225872:-1:exon
so has part: feature:10195654-10195781:-1:exon
so has part: feature:10193146-10193265:-1:exon
so has part: feature:10192503-10192612:-1:exon
so has part: feature:10120524-10120647:-1:exon
so has part: feature:10117044-10117091:-1:exon
so has part: feature:10095886-10096131:-1:exon
so has part: feature:10070224-10070346:-1:exon
so has part: feature:10054141-10055358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10225748-10225872:-1:exon

position:10225748:-1
position: 10225748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10195654-10195781:-1:exon

position:10195654:-1
position: 10195654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10195781:-1
position: 10195781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10193146-10193265:-1:exon

position:10193146:-1
position: 10193146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10193265:-1
position: 10193265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10192503-10192612:-1:exon

position:10192503:-1
position: 10192503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition