Polymorphum gilvum SL003B-26A1 plasmid pSL003B, complete sequence.
type: Entry
definition: Polymorphum gilvum SL003B-26A1 plasmid pSL003B, complete sequence.
sequence version: NC_015258.1
sequence date: 2023-04-07
sequence: sequence
division: CON
label: NC_015258.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02603150
keyword: RefSeq
source: Polymorphum gilvum SL003B-26A1
organism: Polymorphum gilvum SL003B-26A1
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Polymorphum.
reference: 1
references: 21478361
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP002569.1.\nSource DNA is available from Dr Xiao-Lei Wu\n(xiaolei_wu@pku.edu.cn).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/07/2023 01:22:51\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,498\nCDSs (total) :: 4,438\nGenes (coding) :: 4,394\nCDSs (with protein) :: 4,394\nGenes (RNA) :: 60\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 4\nPseudo Genes (total) :: 44\nCDSs (without protein) :: 44\nPseudo Genes (ambiguous residues) :: 0 of 44\nPseudo Genes (frameshifted) :: 8 of 44\nPseudo Genes (incomplete) :: 38 of 44\nPseudo Genes (internal stop) :: 2 of 44\nPseudo Genes (multiple problems) :: 3 of 44\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 69598
topology: circular
so has quality: SO_0000988
location: 1..69598
location: region:1-69598:1
RO_0002162: 991905

NC_015258
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02603150
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Polymorphum gilvum SL003B-26A1T, a crude oil-degrading bacterium from oil-polluted saline soil
author: Li, S.G.
author: Tang, Y.Q.
author: Nie, Y.
author: Cai, M.
author: Wu, X.L.
journal: J Bacteriol
volume: 193
issue: 11
pages: 2894-2895
year: 2011
pubmed: 21478361

21478361
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Nie, Y.
author: Tang, Y.-Q.
author: Li, S.-G.
author: Cai, M.
author: Wu, X.-L.
journal: Submitted (02-MAR-2011) Department of Energy and Resources Engineering, College of Engineering, Peking University, No.5 Yiheyuan Road, Haidian District, Beijing 100871, P. R. China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69598:1
position: 69598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-69598:1:source
so part of: sequence
organism: Polymorphum gilvum SL003B-26A1
mol type: genomic DNA
strain: SL003B-26A1
culture collection: CGMCC:1.9160
type material: type strain of Polymorphum gilvum
plasmid: pSL003B

991905
type: Taxonomy
SIO_000068: taxonomy

SL003B_RS21865
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21865
old locus tag: SL003B_p0060
pseudo: true
so part of: sequence
location: complement(<101..1318)
location: region:101-1318:-1
so has part: feature:101-1318:-1:exon
subclass of: SO_0000010

position:101:-1
position: 101
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:1318:-1
position: 1318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101-1318:-1:exon

SL003B_RS21865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21865
old locus tag: SL003B_p0060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501433.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: UvrD-helicase domain-containing protein
SIO_010081: SL003B_RS21865
subclass of: SO_0000673
so part of: SL003B_RS21865
location: complement(<101..1318)
location: region:101-1318:-1
so has part: feature:101-1318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101-1318:-1:exon

SL003B_RS21870
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21870
old locus tag: SL003B_p0001
so part of: sequence
location: complement(1320..1898)
location: region:1320-1898:-1
so has part: feature:1320-1898:-1:exon
subclass of: SO_0000010

position:1320:-1
position: 1320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1898:-1
position: 1898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1320-1898:-1:exon

SL003B_RS21870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21870
old locus tag: SL003B_p0001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501432.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSPAGERPSREAVLDAFAVESEPDRSTLERYLRLYPEYAAELVDLSRELSRETSEEAAPPSAADQALIDAAWSQHARALPEAIPDPFAALTAADWRTVAHQLDIPRQVVTALRERRVSFLSIPRRFLENLAIAMRCSVAQLELSWGATPLAAARSYKADGKPTTGEQVTFEKVLIDAGIPVEKRTRLLGEMD
SIO_010081: SL003B_RS21870
subclass of: SO_0000673
so part of: SL003B_RS21870
location: complement(1320..1898)
location: region:1320-1898:-1
so has part: feature:1320-1898:-1:exon

WP_003501432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1320-1898:-1:exon

SL003B_RS21875
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21875
old locus tag: SL003B_p0002
so part of: sequence
location: complement(1895..2752)
location: region:1895-2752:-1
so has part: feature:1895-2752:-1:exon
subclass of: SO_0000010

position:1895:-1
position: 1895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2752:-1
position: 2752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1895-2752:-1:exon

SL003B_RS21875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21875
old locus tag: SL003B_p0002
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018240830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MKRLDGVVGAKPEPEAHRNGNTVVAPLRKRRLTGELYERDRKVETLIAELAALPRDELIGRAAITKRSEPGYVPSECLVYFIRASRHDNNETWFERLYRILMERVLRSVPKPENSDGKTESLTRSVVRDKVFSRFVEILSADRASYVDKLDYFEVRFDGAVASLRRDAQEQAWRDENRSKPLEYDEESGELSAEVEAAAGAHDPFAASDFDDPSYRSRLDAAIEALPPEQIRIIHMLKQGFPIDSKEPDVMTIAKALGRSEKTIRTYRDKAFAALRVALADGEKQ
SIO_010081: SL003B_RS21875
subclass of: SO_0000673
so part of: SL003B_RS21875
location: complement(1895..2752)
location: region:1895-2752:-1
so has part: feature:1895-2752:-1:exon

WP_013650715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1895-2752:-1:exon

SL003B_RS21880
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21880
old locus tag: SL003B_p0003
so part of: sequence
location: complement(2765..3823)
location: region:2765-3823:-1
so has part: feature:2765-3823:-1:exon
subclass of: SO_0000010

position:2765:-1
position: 2765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3823:-1
position: 3823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2765-3823:-1:exon

SL003B_RS21880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21880
old locus tag: SL003B_p0003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501430.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
translation: MNPAYDEVLAAGEAAMLSAFDTTAQRLGTAAQNIEKDFWVCWTLDVLFNGLNDSGPRLLFKGGTSLSKGFGLISRFSEDIDVTVFRDDIGEPATIEELEELSGKKRKARLEAIKDACKAYINGPLRDELTKILADRLKAAGADPSNARIEADDTDPDGQTLLIWYPAATPRSEYVRAAIKIESGAKSALDPNSEVPIKPYVDDDLPALDLTVPAVRTVDPERTFWDKVVIVHGLRRWFDKRGELKGGGQRVSRHYYDLHRLVATPVGAAAIKDRALGEDCVAHARMFFNRPDFDLASAVPGSFALAPHDAMIEQLRIDYRAMQGMIFGDPPAFEAVIDSIASLEASLNKGAD
SIO_010081: SL003B_RS21880
subclass of: SO_0000673
so part of: SL003B_RS21880
location: complement(2765..3823)
location: region:2765-3823:-1
so has part: feature:2765-3823:-1:exon

WP_003501430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2765-3823:-1:exon

SL003B_RS22945
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22945
old locus tag: SL003B_p0004
so part of: sequence
location: complement(3828..4889)
location: region:3828-4889:-1
so has part: feature:3828-4889:-1:exon
subclass of: SO_0000010

position:3828:-1
position: 3828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4889:-1
position: 4889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3828-4889:-1:exon

SL003B_RS22945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22945
old locus tag: SL003B_p0004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501428.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6088 family protein
translation: MNEPRRLRGCARSAIALPIDRVGRKQLLYRPDRTIPNAFRVGTADANHSRFQHSSMNIRSVCPKFVCVFRTRLLSEKSIHLSDMAADSPDLKSAMLERIRGDSPRKVWTPSDFVDLASRDAVDKALQRLTKTEILRRIDRGLYDQPGFNKLTQKPNPPDPRSVIDAVGRRDQTRMLVDGMTAANDLGLTDAVPAKIIVHTDARRRPIKLGNVTITFRPTAASKLFWAGRPAMRVVQALYWLRDILLREGESDRVSGKLAKLFEDPAVGAAIKADLAAGITALPTWMWTFLKPLIEGERGDHDQHVSSDRTADDHDADDHHRDDDDGHRHGDPRLKRKSVSTRIASNKRSHSRQ
SIO_010081: SL003B_RS22945
subclass of: SO_0000673
so part of: SL003B_RS22945
location: complement(3828..4889)
location: region:3828-4889:-1
so has part: feature:3828-4889:-1:exon

WP_013650716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3828-4889:-1:exon

SL003B_RS21885
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21885
old locus tag: SL003B_p0061
so part of: sequence
location: complement(4886..7627)
location: region:4886-7627:-1
so has part: feature:4886-7627:-1:exon
subclass of: SO_0000010

position:4886:-1
position: 4886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7627:-1
position: 7627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4886-7627:-1:exon

SL003B_RS21885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21885
old locus tag: SL003B_p0061
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501426.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrD-helicase domain-containing protein
translation: MTDRVRTYRPGFFARLLPQGKWKVRLNVSLPAALQLNVNGALDLPCLDVIAISVTKALLWHSVEVRSRKGIHTLSCLGEEAATRLAANLYSFINSHLFDLISSDTDRLSEVDTKLQTITEGNRQYLAHADLARAIAGVTGEAAAALSHPLFDPELMPATLKAVLPRSLAFVTDPDVRHRYNDAFVSAELSRYRSFFDNLDGRSLSDQQREACIRLEDNNLLVASAGSGKSATMVGKVAYVLDKQLYRPEEILVLAFNKSAADELKERISRQLAVDPGNSECKVTTFHALGRGIIEEVEGRPPQLADWVEHPAGEAKIIEQIIDDLLRSDAEFADLWVNLLVLHPKADIPVEVFGSEADYERYLSVRRRKGNATIGTMAGIHVKSLQEQTITNWLWLHSVEFDYERQIPIEEKNGQIRYVHPDFYYPTSKTIHEHLAINADGSSPFTDYATHAEHKLAGYRKAGMDVFQTTSAQACNGSLIEELEAQLTKRGISFERKSYTAIVKALEPVVIKHYHKLIAVCIKHIRASHLTLDMLLERAKALHDRTRAKEFAQVVWKITETYSRKLEKANRIDFDSMIANATRLVEAGQYQSPYSLILVDEFQDISEPRANLIKALKHQKAFTKIFAVGDDWQSIYRFAGSDITIFTQFEANFGASWQGRLEQTYRCNQLIAETAASFVQRNAAQLKKSVRSTRPAIARSIRVIPTDGEGGKPDFADSCLRLLKRLDTFLGGISVQWRSDGHQKLKVMVLWRYNQLDPFRGATPKFEHIEVSGLSFHRAKGLEADYTILLDVSEGDYGVPSRIEDDELFNLVMPRPETFEFAEERRLFYVALTRASRGVFLLTNSREPSRYIRELSEIAGENLRFETIDGDTLNQCPACGVGQLVERKGRNNGRFLGCNQYPGCDHTQRRSAE
SIO_010081: SL003B_RS21885
subclass of: SO_0000673
so part of: SL003B_RS21885
location: complement(4886..7627)
location: region:4886-7627:-1
so has part: feature:4886-7627:-1:exon

WP_003501426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4886-7627:-1:exon

SL003B_RS21890
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21890
old locus tag: SL003B_p0062
so part of: sequence
location: 7786..8829
location: region:7786-8829:1
so has part: feature:7786-8829:1:exon
subclass of: SO_0000010

position:7786:1
position: 7786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8829:1
position: 8829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7786-8829:1:exon

SL003B_RS21890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21890
old locus tag: SL003B_p0062
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501424.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRNFHCRACQHNLFDCTCECSSTFVAGAEQLSQFLAFCLRGAKHEVIISSPWITGGALATMWTELMGAARRAEIHFYTDYEFNLMQVDKNCKVEDLFETYKRSFAEGIRMLRDLGVTVHRLRGAHNKSLIVDERIFVDGSFNWLSAWRDPKSELTRHDSAVAICGRRATRHRMQYLEQQFNVPLEMEPILLDRDDEDALTYDFLNLTSEGNRFFTGRDEPTYTTDVALPVGQPLFFSILEEFSGVMLKRGIDRQVLDRNDNSIRLVRDRDAAIDHACVSWGDEVLVEDANSFAIFEVDRAQLKNLHLFGSFGRTHRRSDYRTPLQTRDIIPPQALRRDRTTYVQQG
SIO_010081: SL003B_RS21890
subclass of: SO_0000673
so part of: SL003B_RS21890
location: 7786..8829
location: region:7786-8829:1
so has part: feature:7786-8829:1:exon

WP_003501424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7786-8829:1:exon

SL003B_RS21895
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21895
old locus tag: SL003B_p0005
so part of: sequence
location: 9223..9405
location: region:9223-9405:1
so has part: feature:9223-9405:1:exon
subclass of: SO_0000010

position:9223:1
position: 9223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9405:1
position: 9405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9223-9405:1:exon

SL003B_RS21895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21895
old locus tag: SL003B_p0005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501420.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAQDLALAQRHAFALARTLMVPVTLFRSGNEFGVLPSDELDDGEVETIAEFDPFEYGPAH
SIO_010081: SL003B_RS21895
subclass of: SO_0000673
so part of: SL003B_RS21895
location: 9223..9405
location: region:9223-9405:1
so has part: feature:9223-9405:1:exon

WP_003501420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9223-9405:1:exon

SL003B_RS21900
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21900
old locus tag: SL003B_p0006
so part of: sequence
location: 9629..10588
location: region:9629-10588:1
so has part: feature:9629-10588:1:exon
subclass of: SO_0000010

position:9629:1
position: 9629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10588:1
position: 10588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9629-10588:1:exon

SL003B_RS21900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21900
old locus tag: SL003B_p0006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501418.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3991 and toprim domain-containing protein
translation: MEKKELEDLRDRVLCRVVLEQSGFAVDVKESTRKAVKYRRGAEIVIVIHDGRGWFDPLSDAKGDVFSLAAHLEGVSFVEALDQVAALVDFVAKEPVWTRSVRDRVPAATIPERWAKRRKPWRGSMTWRYLRAERCLPETIIRAALQSDALREGPYGSMWAAHVDADGGVTGWEERGPNWRGFSTGGSKVLFRFGALDASRLCVTEAAIDAMSLAAFEGMREGSLYLSTGGGWSPTTEAAVRVLAARPGAQLVAATDANSQGEAFAGRLRDIAEDAGCDWFRLTPPAEDWNDALQERKGEEKERRVGRGGLPHARRPRQG
SIO_010081: SL003B_RS21900
subclass of: SO_0000673
so part of: SL003B_RS21900
location: 9629..10588
location: region:9629-10588:1
so has part: feature:9629-10588:1:exon

WP_003501418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9629-10588:1:exon

SL003B_RS21905
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21905
old locus tag: SL003B_p0007
so part of: sequence
location: 10734..11336
location: region:10734-11336:1
so has part: feature:10734-11336:1:exon
subclass of: SO_0000010

position:10734:1
position: 10734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11336:1
position: 11336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10734-11336:1:exon

SL003B_RS21905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21905
old locus tag: SL003B_p0007
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003525125.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1419 domain-containing protein
translation: MNLSPIRKVFQGVTDRHQMFRMFDRHAQRPNRWEGDDSALYRGEWFEIGEASHDYMFEILPPLWMKAEMFAMREFLTNSITSIFFTLSIDGRIRHFHGYCDLADKGSPARMREAIVERESRPVRAMTREERLEHIWSSTADDYRGYAGERWPEADRGKRTVMFFARPGGTTCKLLEDLTDVEIAAKLPAHLRYLPERQAA
SIO_010081: SL003B_RS21905
subclass of: SO_0000673
so part of: SL003B_RS21905
location: 10734..11336
location: region:10734-11336:1
so has part: feature:10734-11336:1:exon

WP_041376396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10734-11336:1:exon

SL003B_RS21910
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21910
old locus tag: SL003B_p0008
so part of: sequence
location: 11348..11746
location: region:11348-11746:1
so has part: feature:11348-11746:1:exon
subclass of: SO_0000010

position:11348:1
position: 11348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11746:1
position: 11746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11348-11746:1:exon

SL003B_RS21910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21910
old locus tag: SL003B_p0008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501412.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3085 domain-containing protein
translation: MFTFSLTDICAVLARGRADAAANGGFRILYQGISPEAEARAGLWLVGDEGVYVMSNGKLAEGQRPLVIHAEECDPKTNPDYWHYKRQHFGGDDGVEFIDAVELETLVAAQPDATHLRFVMNDTSISISLIRR
SIO_010081: SL003B_RS21910
subclass of: SO_0000673
so part of: SL003B_RS21910
location: 11348..11746
location: region:11348-11746:1
so has part: feature:11348-11746:1:exon

WP_003501412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11348-11746:1:exon

SL003B_RS21915
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21915
old locus tag: SL003B_p0009
so part of: sequence
location: 11842..16983
location: region:11842-16983:1
so has part: feature:11842-16983:1:exon
subclass of: SO_0000010

position:11842:1
position: 11842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16983:1
position: 16983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11842-16983:1:exon

SL003B_RS21915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21915
old locus tag: SL003B_p0009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013650718.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MSNDPFSLGPSGTLDMFGNTALSSGLGLGVTAFGGFAPETAPEPANDDDPDPTPPAPAPALPIAAPLRLAPRRQGDRANFYLDDGEDRGLAASWKERARLNVAAILIANEIERHNVPVTREHQQRLIRFTGFGASELANGMFRRPGEVEFRDGWDDLGSSLESAVSESDYSSLSRCTQYAHFTPEFIIRAIWSGLQRLGWRGGRVLEPGIGTGLFPALMPEEYRDSSYVTGVELDPVTARIVKLLQPKARIIEGDFARTDLSPIYDLAIGNPPFSDRIVRSDRQYRSLGLRLHDYFIARSIDLLKPGAFAAFVTSSGTLDKADSTAREHIAKSADLIAAIRLPEGSFRRDAGTDVVVDILFFRKRKAGEAEGDQTWLDVDEVRPATEDEGAIRINRWFARHPDFVLGDHALTSGPFGETYTCRGRAGVDLEVALNAAISLLPEDRYDGEPSAIDIELEDELGEIVDLRPASEKVREGSFFFDARHGLMQMVDGSPVPIKVRKGRSGDGLSEKHIRIISKLIPVRDAVREVLRCQEQDRPWKDSQVRLRIAWSSFVRDFGPINHTTVSIAEDEETGEVRESHRRPNLKPFLDDPDCWLVASIEDYDLETDTARPGPIFSERVISPPAVPVITSAADALAVVLNERGRVDIDDIAELLHRDPEAVIADLGEAIFRDPTDGSWQTSDAYLSGPVRTKLATAEAAAALDPGFQRNVEALQEVQPADLRPSDITARLGAPWIPASDVVAFVKEMMGAEIRIHHMPELGSWTVEARQLGYSAAGTSEWGTSRRHAGELLADALNSRVPQIFDTIKDADGERRVLNVVDTEAARDKLQKIKEAFQTWVWSDPDRTDRLARVYNDRFNNIAPRKFDGSHLNLPGASGAFVLYEHQKRGIWRIISSGSTYLAHAVGAGKTMTMAAAIMEQRRLGLIAKAMLVVPGHCLAQAAREFLALYPSANILVADETNFTKDKRQRLLSRAATAAWDAIIITHSAFKFIGVPSAFEQQMIHDELQLYEDLLTRVDDEDRVSRKRLERLKEGLQERLESLATRKDDLLTISEIGVDQIVVDEAQEFRKLSFATNMSTLKGIDPNGSQKAWDLYVKSRYIETKNPGRALVLASGTPISNTLGEMFSIQRLLGYEALRERGLHEFDAWASNFGDEKTELELQPSGKYKPVSRFASFVNVPELIAMFRTFADVVMPEDLKAYVKVPVIATGKRQILTAAPTPAFKAYQQILETRIKAIEERDRPAEPGDDILLSVITDGRHAAIDLRLVMPAMDDEPDNKLNLLVRNAHRIWKETLDNIYLRPDGKPYELPGAAQMIFSDLGTINVEKTRGFSAYRWIRDELIRMGVPATEIAFMQDFKKTEAKQRLFGDVRAGKVRFLIGSSETMGTGVNAQLRLKALHHLDVPWLPSQIEQREGRIVRQGNQHDEVDIYAYATQGSLDATMWQNNERKARFIAAALSGDTSIRRLEDVNEGQANQFAMAKAIASGDERLMQKAGLEADIARLDRLRAAHDDDLFAVRRQLRDAEREIETANRRIGEIGQDIERLVPTSGDAFAITVMGKPYTERKDAGRALMKEILTLVQLQSQGEVHIASIGGFDLIYEGERFGRGDNYHYQTLLQRTGATQEIDLAVTVTPLGAISRLEHALDGFEEERERYRLRLAEYQRRLSSYQSRQGGTFAFADELAEKRQKLREVEEALAKSARGDAEAEEIAA
SIO_010081: SL003B_RS21915
subclass of: SO_0000673
so part of: SL003B_RS21915
location: 11842..16983
location: region:11842-16983:1
so has part: feature:11842-16983:1:exon

WP_013650718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11842-16983:1:exon

SL003B_RS21920
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21920
old locus tag: SL003B_p0010
so part of: sequence
location: 17105..17542
location: region:17105-17542:1
so has part: feature:17105-17542:1:exon
subclass of: SO_0000010

position:17105:1
position: 17105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17542:1
position: 17542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17105-17542:1:exon

SL003B_RS21920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21920
old locus tag: SL003B_p0010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501408.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARIEYSKLGFCDALPEEIRGTIEMMAPQFLAETWPVRFVALLSMLEEITDQVEEAGRPFVVNNWVIIVSGLLEHLPRDLSSPECLALMRHSALEPLRQSAMRESPCLDQHDELLRSKYPQWSVVEDLLREYETWAAKQSLIKRH
SIO_010081: SL003B_RS21920
subclass of: SO_0000673
so part of: SL003B_RS21920
location: 17105..17542
location: region:17105-17542:1
so has part: feature:17105-17542:1:exon

WP_003501408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17105-17542:1:exon

SL003B_RS21925
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21925
old locus tag: SL003B_p0011
so part of: sequence
location: 17944..19791
location: region:17944-19791:1
so has part: feature:17944-19791:1:exon
subclass of: SO_0000010

position:17944:1
position: 17944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19791:1
position: 19791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17944-19791:1:exon

SL003B_RS21925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21925
old locus tag: SL003B_p0011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010974797.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MQILKLDPRALKDNPDDARRSKSSPQADALLLATVKAVGIIQPPVVSPQTDGGNGYIIQAGHRRVRQAIAAGLEEIEVIVREAANDNGAMRSMVENIAREPLNPVDQWRGIERLVALGWTEEAIAVALALPVRQIRKLRLLANVLPAMLDHMALGDLPNEQQLRTVAAASLDEQKEVWKAHKPKKNERADWYNISRALSKTRMYAKDASFGDELAAAYGIEWVEDLFSPADEDTRYTTNVEAFLGAQQEWMTNNLPKKGTIVEVNNWGQPELPKKAERVYGKPSKSDHVAMYLDRDGKVQSVAFRMPEDRQARGKGGVSATGGQGDIHDGRVIDTPKPRPDVTQKGHDMIGDFRTDALHEALGRAPIEDDMLMALLVLAFAGQNVRVDSGANDTVFGPKRFRRHAARLFSEDGKLAFDTETVRVAARSMLTDVLSCRRGMSNSGVVSRIAGDAIGADGFLPNMGSEDFLLCLSRQALEAAAKEVNVLPRPKVRETRAALVDHFKEGHFVHASALFAPDPNEVADLISQADTPDDEETQVDAAENGLDGESVEGAAVDAETDADTGEGAPVGGSVVDEREAPDPFEGEADLPDTFDRAPGTTDSDDAQEAYRVAAE
SIO_010081: SL003B_RS21925
subclass of: SO_0000673
so part of: SL003B_RS21925
location: 17944..19791
location: region:17944-19791:1
so has part: feature:17944-19791:1:exon

WP_035243678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17944-19791:1:exon

SL003B_RS21930
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21930
old locus tag: SL003B_p0012
so part of: sequence
location: 19891..20364
location: region:19891-20364:1
so has part: feature:19891-20364:1:exon
subclass of: SO_0000010

position:19891:1
position: 19891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20364:1
position: 20364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19891-20364:1:exon

SL003B_RS21930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21930
old locus tag: SL003B_p0012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010974883.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAHISFMAPVGSIIAWSDGAPRPSERHRRKLSAWQSNNSNGRLIRKQGELGSGSIILPASITLHEADQGAAGVITIRVHRTFSLETRLTFTIVERPAIGSCRVFDRAGDNAELVHLAANRQAAEEWLSRHGYPHAALEVVTADEVAADVVEGRAAA
SIO_010081: SL003B_RS21930
subclass of: SO_0000673
so part of: SL003B_RS21930
location: 19891..20364
location: region:19891-20364:1
so has part: feature:19891-20364:1:exon

WP_041376397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19891-20364:1:exon

SL003B_RS21935
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21935
old locus tag: SL003B_p0013
so part of: sequence
location: 20361..21248
location: region:20361-21248:1
so has part: feature:20361-21248:1:exon
subclass of: SO_0000010

position:20361:1
position: 20361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21248:1
position: 21248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20361-21248:1:exon

SL003B_RS21935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21935
old locus tag: SL003B_p0013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501402.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTSPVMTEANDASGYPKVSFGRSADGFPVARVADTAFAMLPGRNGRHYLGLGGKIARPLAEWRRTDFYGHSGELADEAAFRACVIENAEHQRERQALGRCEIFTRVHTPWGMSQRTTVYAEGVECHSTAGHGGFKLSAERNRKVHPLLRSKDGFYEEDSAWAIVAITFPHLFTGFERRCAERSIKDWWPDAWETIFVTTLAPGESHVKDRRAFEAAHADDWIVIAALRSDHHPGMIEVIATRGGKREHNAKERRFLLPSAEYVPGRFGFVIDVDCHRSYDGPSSFVAWQGRETS
SIO_010081: SL003B_RS21935
subclass of: SO_0000673
so part of: SL003B_RS21935
location: 20361..21248
location: region:20361-21248:1
so has part: feature:20361-21248:1:exon

WP_041376398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20361-21248:1:exon

SL003B_RS21940
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21940
so part of: sequence
location: 21245..21619
location: region:21245-21619:1
so has part: feature:21245-21619:1:exon
subclass of: SO_0000010

position:21245:1
position: 21245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21619:1
position: 21619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21245-21619:1:exon

SL003B_RS21940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501400.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRSPERQALLFRMEEARRQTQRQLDLIDRQITAKMTALIPSLGRRRSGYRRGKPPAPEAFLARYRSSLAAITAERQPEIDALARKLARQQAAIAAFQARPEFGASARGPERGCRHHRRERSAP
SIO_010081: SL003B_RS21940
subclass of: SO_0000673
so part of: SL003B_RS21940
location: 21245..21619
location: region:21245-21619:1
so has part: feature:21245-21619:1:exon

WP_041376399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21245-21619:1:exon

SL003B_RS22955
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22955
old locus tag: SL003B_p0014
so part of: sequence
location: 21616..21843
location: region:21616-21843:1
so has part: feature:21616-21843:1:exon
subclass of: SO_0000010

position:21616:1
position: 21616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21843:1
position: 21843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21616-21843:1:exon

SL003B_RS22955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22955
old locus tag: SL003B_p0014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501398.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRFDAEPLPPLTEEEVNALQDYAARHGRSWKRILNNAWMGVAPCDDGPILRRLRNTHGPSWLDRYRPPKPQAEH
SIO_010081: SL003B_RS22955
subclass of: SO_0000673
so part of: SL003B_RS22955
location: 21616..21843
location: region:21616-21843:1
so has part: feature:21616-21843:1:exon

WP_013650721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21616-21843:1:exon

SL003B_RS21945
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21945
old locus tag: SL003B_p0058
so part of: sequence
location: complement(21844..22149)
location: region:21844-22149:-1
so has part: feature:21844-22149:-1:exon
subclass of: SO_0000010

position:21844:-1
position: 21844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22149:-1
position: 22149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21844-22149:-1:exon

SL003B_RS21945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21945
old locus tag: SL003B_p0058
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003524944.1
GO component: GO:0005829 - cytosol [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alkylphosphonate utilization protein
translation: MSDQSNDDYVYDEAIGEWRPASELAAEKAKAAEVRDASGNVLADGDSVVLIKDLKVKGAGQTLKQGTVIKSIRLTDNPEEIDCRHDAIKGLVLRTEFVRKR
SIO_010081: SL003B_RS21945
subclass of: SO_0000673
so part of: SL003B_RS21945
location: complement(21844..22149)
location: region:21844-22149:-1
so has part: feature:21844-22149:-1:exon

WP_013650755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21844-22149:-1:exon

SL003B_RS21950
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21950
old locus tag: SL003B_p0015
so part of: sequence
location: 22680..23267
location: region:22680-23267:1
so has part: feature:22680-23267:1:exon
subclass of: SO_0000010

position:22680:1
position: 22680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23267:1
position: 23267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22680-23267:1:exon

SL003B_RS21950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21950
old locus tag: SL003B_p0015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003517406.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKPATQSRQSARVVQLRKGATIEMVRLTCPDEAQALRIAESFGTAILDSDGIRDMHERLIVETATGLSEGLSERAMQIHLQRIVGAYVGSAHGAGQFYSRAVSEARDATAKGAAEARDEDLDGPVGYDSAAQRKREFAADMGVQAHALRMAAEGAVAAYEQIVGEAWKPFDRPVDNPGQSLDRKAAAAQMSAFD
SIO_010081: SL003B_RS21950
subclass of: SO_0000673
so part of: SL003B_RS21950
location: 22680..23267
location: region:22680-23267:1
so has part: feature:22680-23267:1:exon

WP_003501393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22680-23267:1:exon

SL003B_RS21955
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21955
old locus tag: SL003B_p0016
so part of: sequence
location: 23562..24488
location: region:23562-24488:1
so has part: feature:23562-24488:1:exon
subclass of: SO_0000010

position:23562:1
position: 23562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24488:1
position: 24488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23562-24488:1:exon

SL003B_RS21955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21955
old locus tag: SL003B_p0016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501391.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MSRKSESARIDIYARITKRIVADLEKGVRPWVQPWSAGNMSGRITRPLRHNGQPYSGLNVLLLWSESIARGFTSATWMTLRQANELGAHVRKGESGATVVYASRFTKTEKDASGGEVDRDIPFLKAYSVFNCDQIDGLPDQYYHRPEPAADPVARIEHADRFFANTGAVIRHGGSQAFYQPSSDSIQMPEFEAFRDAESYYAVLGHETTHWVGASHRLNRDLSRYHKDRTERAREELCADIGACFLCADLGIVPELEPRPDHASYVASWLKLLDGDRRAIFQAAAHAQRAVAYLHDLQPNAETGRQAA
SIO_010081: SL003B_RS21955
subclass of: SO_0000673
so part of: SL003B_RS21955
location: 23562..24488
location: region:23562-24488:1
so has part: feature:23562-24488:1:exon

WP_003501391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23562-24488:1:exon

SL003B_RS21960
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21960
old locus tag: SL003B_p0065
so part of: sequence
location: 24635..24877
location: region:24635-24877:1
so has part: feature:24635-24877:1:exon
subclass of: SO_0000010

position:24635:1
position: 24635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24877:1
position: 24877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24635-24877:1:exon

SL003B_RS21960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21960
old locus tag: SL003B_p0065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501388.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapB family antitoxin
translation: MPINVNNPEADALTRKFAHMAGVSITDAIVIAMKEAIERRRHEETPLQTAARLREQHGVKLDAAARQPLPREAYDELWES
SIO_010081: SL003B_RS21960
subclass of: SO_0000673
so part of: SL003B_RS21960
location: 24635..24877
location: region:24635-24877:1
so has part: feature:24635-24877:1:exon

WP_003501388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24635-24877:1:exon

SL003B_RS21965
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21965
old locus tag: SL003B_p0017
so part of: sequence
location: 24877..25281
location: region:24877-25281:1
so has part: feature:24877-25281:1:exon
subclass of: SO_0000010

position:25281:1
position: 25281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24877-25281:1:exon

SL003B_RS21965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21965
old locus tag: SL003B_p0017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018431454.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MFVDACAIIALLSDEPEAARVSNAIASAKAAFTSPVAVLEAVLGLARPDKFGLAVAEVEPIVIEFLDERGIEIRDLPPATAMTRIALSAAHRYRAGRRGLNLGDCLHYACAKYYNVPILATADEFRQTDIETVP
SIO_010081: SL003B_RS21965
subclass of: SO_0000673
so part of: SL003B_RS21965
location: 24877..25281
location: region:24877-25281:1
so has part: feature:24877-25281:1:exon

WP_035243676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24877-25281:1:exon

SL003B_RS21970
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21970
old locus tag: SL003B_p0018
so part of: sequence
location: 26084..26401
location: region:26084-26401:1
so has part: feature:26084-26401:1:exon
subclass of: SO_0000010

position:26084:1
position: 26084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26401:1
position: 26401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26084-26401:1:exon

SL003B_RS21970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21970
old locus tag: SL003B_p0018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501379.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF736 domain-containing protein
translation: MAVIGEFITNGNNSIIGNVRTLTVSMKARLNPIERVSRDAPDFRITAGNGVEVGAGWKAVSNDGEEYISVKLDDPSFNAPITAALWPSEKEGEYALIWNRPKREA
SIO_010081: SL003B_RS21970
subclass of: SO_0000673
so part of: SL003B_RS21970
location: 26084..26401
location: region:26084-26401:1
so has part: feature:26084-26401:1:exon

WP_003501379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26084-26401:1:exon

SL003B_RS23650
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS23650
so part of: sequence
location: 26722..26892
location: region:26722-26892:1
so has part: feature:26722-26892:1:exon
subclass of: SO_0000010

position:26722:1
position: 26722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26892:1
position: 26892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26722-26892:1:exon

SL003B_RS23650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS23650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012654900.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTISLEQQIEELRAEMKNACDANDRRVIAAELELVLAELAAIEAEQDGRVSAEPPF
SIO_010081: SL003B_RS23650
subclass of: SO_0000673
so part of: SL003B_RS23650
location: 26722..26892
location: region:26722-26892:1
so has part: feature:26722-26892:1:exon

WP_003501377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26722-26892:1:exon

SL003B_RS21975
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21975
old locus tag: SL003B_p0019
so part of: sequence
location: complement(26933..27211)
location: region:26933-27211:-1
so has part: feature:26933-27211:-1:exon
subclass of: SO_0000010

position:26933:-1
position: 26933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27211:-1
position: 27211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26933-27211:-1:exon

SL003B_RS21975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21975
old locus tag: SL003B_p0019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523830.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0030261 - chromosome condensation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HU family DNA-binding protein
translation: MTTTNEIADKIASEQNLTKTQAKAIVESVFNQIAEAAKAGAETSIPSFGKFKVKDTPEREGRNPATGATIKIAASKKLTFTPGKAVKDALNG
SIO_010081: SL003B_RS21975
subclass of: SO_0000673
so part of: SL003B_RS21975
location: complement(26933..27211)
location: region:26933-27211:-1
so has part: feature:26933-27211:-1:exon

WP_013650722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26933-27211:-1:exon

SL003B_RS22970
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22970
old locus tag: SL003B_p0020
so part of: sequence
location: complement(27266..27559)
location: region:27266-27559:-1
so has part: feature:27266-27559:-1:exon
subclass of: SO_0000010

position:27266:-1
position: 27266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27559:-1
position: 27559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27266-27559:-1:exon

SL003B_RS22970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22970
old locus tag: SL003B_p0020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501373.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MSLYPYQLYCERIDRARNMARYYMLSIQPTLFGETAVVRSWGRIGKSGGEMSELFETEAQAAFRFLELARCKRKKGYRPAASCGNSARSRSGRPEGP
SIO_010081: SL003B_RS22970
subclass of: SO_0000673
so part of: SL003B_RS22970
location: complement(27266..27559)
location: region:27266-27559:-1
so has part: feature:27266-27559:-1:exon

WP_003501373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27266-27559:-1:exon

SL003B_RS21980
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: istB
locus tag: SL003B_RS21980
old locus tag: SL003B_p0021
so part of: sequence
location: complement(27796..28566)
location: region:27796-28566:-1
so has part: feature:27796-28566:-1:exon
subclass of: SO_0000010

position:27796:-1
position: 27796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28566:-1
position: 28566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27796-28566:-1:exon

SL003B_RS21980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: istB
locus tag: SL003B_RS21980
old locus tag: SL003B_p0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003495445.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MSTQASDNPPAILLSHTLKTLKLPTFQREYQKLARLCATQGVDHVGYLTRLAEQEMIERDRRKVERRIKAARFPVVKSLDSFDFAAIPKLNKMQVLELARCEWVERRENVIALGPSGTGKTHVALGLGLAACQKGLSVGFTTAAALVSEMMEARDERRLLRFQKQMAAYKLLIIDELGFVPLSKTGAELLFELIAQRYERGATLITSNLPFDEWTETLGSERLTGALLDRLTHHVNILEMNGDSYRLAQSRARRAG
SIO_010081: SL003B_RS21980
subclass of: SO_0000673
so part of: SL003B_RS21980
location: complement(27796..28566)
location: region:27796-28566:-1
so has part: feature:27796-28566:-1:exon

WP_013650723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27796-28566:-1:exon

SL003B_RS21985
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: istA
locus tag: SL003B_RS21985
old locus tag: SL003B_p0022
so part of: sequence
location: complement(28563..30017)
location: region:28563-30017:-1
so has part: feature:28563-30017:-1:exon
subclass of: SO_0000010

position:28563:-1
position: 28563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30017:-1
position: 30017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28563-30017:-1:exon

SL003B_RS21985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: istA
locus tag: SL003B_RS21985
old locus tag: SL003B_p0022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_052096176.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MSRRQAAKHFNISRDSVSKMLSYSTPPGYRRQAPVRRPKLDAFVSTIDHWLDEDLKVPRKQRHTAKRVFDRLRAECGFTGGYTIIKDYMREREQRRQEVFVPLSHPPGHAQADFGEAVVVIGGVEQKAHFFVLDLPHSDACYVRAYPAAVSEAWIDGHVHAFAFFGAVPQSIVYDNDRCLVSKILADGTRKRTVLFSGFLSHYLIRDRYGRPGKGNDKGSVEGLVGYARRNFMVPIPRFATWDEFNAWLEEQCRKRQRDRLRGESETIAERLQRDLAAMRPLPASPFEACDQASGRVSSQALVRYRTNDYSVPVAFGHQDVWIRGYVDEVVIGCRGEIIARHPRSWEREDVVFDPLHYLPLIEQKINALDQAAPLQGWDLPEAFATLRRLMEARMAKHGRREYVQVLRLLESFELADLHVAVKQALQIGAIGFDAVKHLLLCQVERRPPRLDLSIYPYLPRATVEKTSAKAYMRLLSTHAGDAA
SIO_010081: SL003B_RS21985
subclass of: SO_0000673
so part of: SL003B_RS21985
location: complement(28563..30017)
location: region:28563-30017:-1
so has part: feature:28563-30017:-1:exon

WP_083812017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28563-30017:-1:exon

SL003B_RS21990
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS21990
old locus tag: SL003B_p0023
pseudo: true
so part of: sequence
location: <30183..30593
location: region:30183-30593:1
so has part: feature:30183-30593:1:exon
subclass of: SO_0000010

position:30183:1
position: 30183
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:30593:1
position: 30593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30183-30593:1:exon

SL003B_RS21990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS21990
old locus tag: SL003B_p0023
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009505782.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: fumarylacetoacetate hydrolase family protein
SIO_010081: SL003B_RS21990
subclass of: SO_0000673
so part of: SL003B_RS21990
location: <30183..30593
location: region:30183-30593:1
so has part: feature:30183-30593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30183-30593:1:exon

SL003B_RS22550
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22550
old locus tag: SL003B_p0024
pseudo: true
so part of: sequence
location: complement(30903..32466)
location: region:30903-32466:-1
so has part: feature:30903-32466:-1:exon
subclass of: SO_0000010

position:30903:-1
position: 30903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32466:-1
position: 32466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30903-32466:-1:exon

SL003B_RS22550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22550
old locus tag: SL003B_p0024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013654839.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase
SIO_010081: SL003B_RS22550
subclass of: SO_0000673
so part of: SL003B_RS22550
location: complement(30903..32466)
location: region:30903-32466:-1
so has part: feature:30903-32466:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30903-32466:-1:exon

SL003B_RS22005
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: tnpB
locus tag: SL003B_RS22005
old locus tag: SL003B_p0026
so part of: sequence
location: complement(32536..32889)
location: region:32536-32889:-1
so has part: feature:32536-32889:-1:exon
subclass of: SO_0000010

position:32536:-1
position: 32536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32889:-1
position: 32889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32536-32889:-1:exon

SL003B_RS22005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: tnpB
locus tag: SL003B_RS22005
old locus tag: SL003B_p0026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008491906.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MFGQGGSAKVFVATRPVDFRKGIDGLALAVQEMFGLDPFCGAVFVFRSKRADRIKLLIWDQTGMVLVHKRLECGKFVWPQAQDGVMRISSAQMAALFEGLDWRLVRPERARRPLVAG
SIO_010081: SL003B_RS22005
subclass of: SO_0000673
so part of: SL003B_RS22005
location: complement(32536..32889)
location: region:32536-32889:-1
so has part: feature:32536-32889:-1:exon

WP_013650726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32536-32889:-1:exon

SL003B_RS22010
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22010
old locus tag: SL003B_p0027
so part of: sequence
location: complement(32889..33305)
location: region:32889-33305:-1
so has part: feature:32889-33305:-1:exon
subclass of: SO_0000010

position:33305:-1
position: 33305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32889-33305:-1:exon

SL003B_RS22010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22010
old locus tag: SL003B_p0027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011510447.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MDVHLDGSRGVGVSRLEVIEGPSGRRRRTKADRARIAAESMMPGVKVADVARKHGTTRWQIYDWRRQIRKGNLVLPDSIAALPMFAELVVDDSAVDAATARPASDLEIVVGDVVIRAGADTDERQLTRAIRAARAAAS
SIO_010081: SL003B_RS22010
subclass of: SO_0000673
so part of: SL003B_RS22010
location: complement(32889..33305)
location: region:32889-33305:-1
so has part: feature:32889-33305:-1:exon

WP_013650727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32889-33305:-1:exon

SL003B_RS23595
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS23595
old locus tag: SL003B_p0068
so part of: sequence
location: complement(33367..33696)
location: region:33367-33696:-1
so has part: feature:33367-33696:-1:exon
subclass of: SO_0000010

position:33367:-1
position: 33367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33696:-1
position: 33696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33367-33696:-1:exon

SL003B_RS23595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS23595
old locus tag: SL003B_p0068
inference: COORDINATES: protein motif:HMM:NF024212.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MNDHSTSTSLQSLDAIDRHRVLTDHPAHLIRRSYQIFLFCFDEAMAGLRLTPVTWIILATAHNFPDLSVTELARRAAVDKASCGRAAAVLQKRGLLRKRDADHLLPFLS
SIO_010081: SL003B_RS23595
subclass of: SO_0000673
so part of: SL003B_RS23595
location: complement(33367..33696)
location: region:33367-33696:-1
so has part: feature:33367-33696:-1:exon

WP_013650760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33367-33696:-1:exon

SL003B_RS22015
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22015
old locus tag: SL003B_p0069
pseudo: true
so part of: sequence
location: <34365..36097
location: region:34365-36097:1
so has part: feature:34365-36097:1:exon
subclass of: SO_0000010

position:34365:1
position: 34365
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:36097:1
position: 36097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34365-36097:1:exon

SL003B_RS22015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22015
old locus tag: SL003B_p0069
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013845944.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: AAA family ATPase
SIO_010081: SL003B_RS22015
subclass of: SO_0000673
so part of: SL003B_RS22015
location: <34365..36097
location: region:34365-36097:1
so has part: feature:34365-36097:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34365-36097:1:exon

SL003B_RS23000
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS23000
old locus tag: SL003B_p0071
pseudo: true
so part of: sequence
location: 36106..>36612
location: region:36106-36612:1
so has part: feature:36106-36612:1:exon
subclass of: SO_0000010

position:36106:1
position: 36106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36612:1
position: 36612
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36106-36612:1:exon

SL003B_RS23000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS23000
old locus tag: SL003B_p0071
inference: COORDINATES: protein motif:HMM:NF039997.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF6118 family protein
SIO_010081: SL003B_RS23000
subclass of: SO_0000673
so part of: SL003B_RS23000
location: 36106..>36612
location: region:36106-36612:1
so has part: feature:36106-36612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36106-36612:1:exon

SL003B_RS24040
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS24040
so part of: sequence
location: 36701..36862
location: region:36701-36862:1
so has part: feature:36701-36862:1:exon
subclass of: SO_0000010

position:36701:1
position: 36701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36862:1
position: 36862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36701-36862:1:exon

SL003B_RS24040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS24040
inference: COORDINATES: protein motif:HMM:NF039997.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6118 family protein
translation: MQSGSPGGWRGVVDASNLVRANQEALTVCAETAAKAKKDQRCTINVAVPENTP
SIO_010081: SL003B_RS24040
subclass of: SO_0000673
so part of: SL003B_RS24040
location: 36701..36862
location: region:36701-36862:1
so has part: feature:36701-36862:1:exon

WP_277914635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36701-36862:1:exon

SL003B_RS22025
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22025
old locus tag: SL003B_p0028
so part of: sequence
location: 37045..37824
location: region:37045-37824:1
so has part: feature:37045-37824:1:exon
subclass of: SO_0000010

position:37045:1
position: 37045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37824:1
position: 37824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37045-37824:1:exon

SL003B_RS22025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22025
old locus tag: SL003B_p0028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007708767.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator
translation: MAAEAGEDEKERAPRSQTLVRGLEIIDAVADRARSIAEIAAMTGLTYSTVHRIVSVLLERRYLKAENPREFALGPRLIELGFAAYSRTDLVRIARPWLEDLARATRDTVHLAQLDGWEVAYLDKLRGTRPVEISSRIGGRKPVISTGVGKALVLDESEASLSRLYQRDHHLLPGDMSEADWLQLMAGYRSGGYSYDLGEDEPSIRCVAAPIRDATGRIIAAISVSSTLEYMSPDRMRDLVPEVQRVAAGISAELGARPR
SIO_010081: SL003B_RS22025
subclass of: SO_0000673
so part of: SL003B_RS22025
location: 37045..37824
location: region:37045-37824:1
so has part: feature:37045-37824:1:exon

WP_013650728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37045-37824:1:exon

SL003B_RS22030
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22030
old locus tag: SL003B_p0056
so part of: sequence
location: complement(37870..39267)
location: region:37870-39267:-1
so has part: feature:37870-39267:-1:exon
subclass of: SO_0000010

position:37870:-1
position: 37870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39267:-1
position: 39267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37870-39267:-1:exon

SL003B_RS22030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22030
old locus tag: SL003B_p0056
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009507327.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-binding oxidoreductase
translation: MNLERSSAGLLTALKRAVGDSNIKRGSDIPEAALRDWSDERGGTPLALVTPRDTDAVAAALRICHDYDTPVVPQGGRTGLAGGAVPSEGAVLLSMAGLDRIDEIDTASGLMVVGAGCILQRIQEAALDAGFSFPLDLGARGSCQIGGNIATNAGGNRVIRYGMTRDLVLGLEVVLADGTVLSIMNRMPKNNAALDLKHLFIGSEGTLGVVTRAVLKLHPGVGGANAALVAVADFEAAAGLLRHAQRALSGRVTAFELMWNDYYRAVLAETGVRAPVEPDHAIYALIEMQGADADAERPGFEAMLEAAFEAGLVADAAIAQSQREVEAFWSLRDGIAEILSRRAPTINFDVSVPLARIGACVDEIRAALETAFPALKVIFFGHAGDSNIHLVAGPITDIDPTGHGIEKAVYEIIRAYGGSVSAEHGIGLHKKPWLAYSRSENELAMLRQLKRSLDPKGILNPGKVL
SIO_010081: SL003B_RS22030
subclass of: SO_0000673
so part of: SL003B_RS22030
location: complement(37870..39267)
location: region:37870-39267:-1
so has part: feature:37870-39267:-1:exon

WP_148259504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37870-39267:-1:exon

SL003B_RS22035
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22035
old locus tag: SL003B_p0029
so part of: sequence
location: 39338..40486
location: region:39338-40486:1
so has part: feature:39338-40486:1:exon
subclass of: SO_0000010

position:39338:1
position: 39338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40486:1
position: 40486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39338-40486:1:exon

SL003B_RS22035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22035
old locus tag: SL003B_p0029
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007092483.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter substrate-binding protein
translation: MTKKRASVYLGRAGGGAEAPALRSGPRQNPAGARTKTGNGFCITGRTDMSLTKAAHTLRAGFVAAFASAALFSTTAAAEPEITFRAAHSSTPSSTGHKAFEFLDKELREKSGGRIGLEIFPNSQLGGERELVENIQFGNVDLTFVSSAPVASFAPQFFAFDVPFLFKDRGQAYKVLDGDVGKEILGSLNDKGMVGLAYWENGFRQLTNNKKEIRSPDDLAGLKMRTMENEVHIAAWRAEGANPAPLAFNELFTALQQGTFDAQEGPINLFYDMKFNEVQKFISKTNHIYSPWPLLANPDKLASLSDEDRAIFDEAVKAATDYQRGLAKEADDKAEAAMTDVTFTTLTPEELKAFSDKVVPIVDLVKQKAGADLVDRLLAAAK
SIO_010081: SL003B_RS22035
subclass of: SO_0000673
so part of: SL003B_RS22035
location: 39338..40486
location: region:39338-40486:1
so has part: feature:39338-40486:1:exon

WP_242390416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39338-40486:1:exon

SL003B_RS22040
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22040
old locus tag: SL003B_p0030
so part of: sequence
location: 40586..41068
location: region:40586-41068:1
so has part: feature:40586-41068:1:exon
subclass of: SO_0000010

position:40586:1
position: 40586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41068:1
position: 41068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40586-41068:1:exon

SL003B_RS22040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22040
old locus tag: SL003B_p0030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013394937.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter small permease
translation: MFKLIDEHFEEAIVVALMALMSVLIGVQIFMRYVMGASLSWSEELARYFFIWATYVGIAYAVRKDAHIRVTMGTDLLSAKGQTYVRILTHVIFGAFALFVMYQGWFMVEKTFRFGQKSASLGIPMGIIYLAPFTGFLLVVLRLIQAIVIDLRAAGQGAAR
SIO_010081: SL003B_RS22040
subclass of: SO_0000673
so part of: SL003B_RS22040
location: 40586..41068
location: region:40586-41068:1
so has part: feature:40586-41068:1:exon

WP_013650730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40586-41068:1:exon

SL003B_RS22045
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22045
old locus tag: SL003B_p0031
so part of: sequence
location: 41065..42348
location: region:41065-42348:1
so has part: feature:41065-42348:1:exon
subclass of: SO_0000010

position:41065:1
position: 41065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42348:1
position: 42348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41065-42348:1:exon

SL003B_RS22045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22045
old locus tag: SL003B_p0031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007092485.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter large permease
translation: MISLILFGLLALLLLLSVPIAISLGIASTIALIVSGKVSGSYVPQGLVTSIDSFPLMAVPFFILAGDLMGQGGLSQRLINVGRMFFGRYTGGMAIIAVVTCIFFAAISGSGPATVAAVGAILLPAMARDGYKPSFSSGLVACSGSLGVIIPPSIPMVIYATSANVSVSKMFMGGVVPGLLIGFALIAYAWLQSKKDGQKPGDYRPTGREMLAVLNDAKWALMVPVIILGGIYGGIFTPTEAAAVGVIYGLVVGTFVYRELKLKDLYKIFAGSALTSATIMLIVGTATIFGRALAIEGVPMMLADFITSAVDQAWLLLLAINVILLIVGTFIETIAAIIILTPILLPLVTALGVSAEHFGIVMIVNLAIGMITPPVGVNLFVASRVSGLSLETVVKGAITPMLVMIAVLLVITYVPALSLALPAFFGM
SIO_010081: SL003B_RS22045
subclass of: SO_0000673
so part of: SL003B_RS22045
location: 41065..42348
location: region:41065-42348:1
so has part: feature:41065-42348:1:exon

WP_013650731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41065-42348:1:exon

SL003B_RS22050
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22050
old locus tag: SL003B_p0057
so part of: sequence
location: 42365..43276
location: region:42365-43276:1
so has part: feature:42365-43276:1:exon
subclass of: SO_0000010

position:42365:1
position: 42365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43276:1
position: 43276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42365-43276:1:exon

SL003B_RS22050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22050
old locus tag: SL003B_p0057
EC number: 1.2.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010322184.1
GO function: GO:0008774 - acetaldehyde dehydrogenase (acetylating) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetaldehyde dehydrogenase (acetylating)
translation: MSSKLKAVIIGPGNIGTDLLMKMKRSAWVEPVWMVGIDPSSEGLKRAADMGVKACATGVDGILEHVIADDIRVAFDATSAYAHAENSRKLNELGVIMVDLTPAAIGPFCIPPVNLADHAKKLEMNVNMVTCGGQATIPMVAAVSRVQPVEYGEIVAAVSSRSVGPGTRKNIDEFTRTTAAAIEKVGGAKRGKAIIIVNPAEPPLLMRDTVHVLTEGEPDQAAITESVKAMVAEVRKYVPGYKLVNGPVFDGRRVSIYLEVEGLGDFLPKYAGNLDIMTAAALRTAELFAQEAANGVVTLPARG
SIO_010081: SL003B_RS22050
subclass of: SO_0000673
so part of: SL003B_RS22050
location: 42365..43276
location: region:42365-43276:1
so has part: feature:42365-43276:1:exon

WP_013650754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42365-43276:1:exon

SL003B_RS22055
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: dmpG
locus tag: SL003B_RS22055
old locus tag: SL003B_p0059
so part of: sequence
location: 43288..44313
location: region:43288-44313:1
so has part: feature:43288-44313:1:exon
subclass of: SO_0000010

position:43288:1
position: 43288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44313:1
position: 44313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43288-44313:1:exon

SL003B_RS22055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: dmpG
locus tag: SL003B_RS22055
old locus tag: SL003B_p0059
EC number: 4.1.3.39
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010325238.1
GO function: GO:0008701 - 4-hydroxy-2-oxovalerate aldolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-2-oxovalerate aldolase
translation: MNIDGRKITLHEMSLRDGMHAKRHQISTDQMVAIATAADEAGMPWIEVTHGDGLGGASVNYGFAAHTDADYLRAVVPNLKQAKVSALLLPGIGTVDMLKEAIDCGISGVRVATHCTEADCAEQHITYAAKTGLDTVGFLMMSHRAGPEKLVEQALLMESYGANCVYCTDSAGHMLPDDVTARISAIRGALKPETELGFHGHHNLGMGIANSVAAVAAGANRIDGAIAGLGAGAGNAATELLVAVFERMGAQTGVDLFKIMDVAEDLVVPMMDRPIRVDRGSLVLGYAGVYSSFLLFAERAEKRYGVPARDLLLELGRRGMVGGQEDMIEDLALTLSQQRTA
SIO_010081: SL003B_RS22055
subclass of: SO_0000673
so part of: SL003B_RS22055
location: 43288..44313
location: region:43288-44313:1
so has part: feature:43288-44313:1:exon

WP_013650756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43288-44313:1:exon

SL003B_RS23005
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS23005
old locus tag: SL003B_p0032
so part of: sequence
location: 44573..45178
location: region:44573-45178:1
so has part: feature:44573-45178:1:exon
subclass of: SO_0000010

position:44573:1
position: 44573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45178:1
position: 45178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44573-45178:1:exon

SL003B_RS23005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS23005
old locus tag: SL003B_p0032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010339849.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYMRVSSSDERQSVALQRDALLAVGVDQRHLHQDRASGARDDRPGLKACLAELCEGDVLVVWKLDRLGRSLSHLIRIVEDLKTHGIAFRSLTEAIDTTNSHGSFLFNLFGTLAEYERTLITERVNAGLAAARRRGRKGGRPPTIDTEKIEQILAALEAGSSKAAVCRTFHVPRSTLIDTLRRAGWTGPGKADDPATPV
SIO_010081: SL003B_RS23005
subclass of: SO_0000673
so part of: SL003B_RS23005
location: 44573..45178
location: region:44573-45178:1
so has part: feature:44573-45178:1:exon

WP_013650732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44573-45178:1:exon

SL003B_RS23935
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS23935
pseudo: true
so part of: sequence
location: 45193..>45672
location: region:45193-45672:1
so has part: feature:45193-45672:1:exon
subclass of: SO_0000010

position:45193:1
position: 45193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45672:1
position: 45672
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45193-45672:1:exon

SL003B_RS23935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS23935
inference: COORDINATES: protein motif:HMM:NF025079.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF4158 domain-containing protein
SIO_010081: SL003B_RS23935
subclass of: SO_0000673
so part of: SL003B_RS23935
location: 45193..>45672
location: region:45193-45672:1
so has part: feature:45193-45672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45193-45672:1:exon

SL003B_RS23470
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS23470
pseudo: true
so part of: sequence
location: complement(46570..>46710)
location: region:46570-46710:-1
so has part: feature:46570-46710:-1:exon
subclass of: SO_0000010

position:46570:-1
position: 46570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46710:-1
position: 46710
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46570-46710:-1:exon

SL003B_RS23470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS23470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012330183.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: SL003B_RS23470
subclass of: SO_0000673
so part of: SL003B_RS23470
location: complement(46570..>46710)
location: region:46570-46710:-1
so has part: feature:46570-46710:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46570-46710:-1:exon

SL003B_RS22070
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: trbI
locus tag: SL003B_RS22070
old locus tag: SL003B_p0034
so part of: sequence
location: complement(46789..48102)
location: region:46789-48102:-1
so has part: feature:46789-48102:-1:exon
subclass of: SO_0000010

position:46789:-1
position: 46789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48102:-1
position: 48102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46789-48102:-1:exon

SL003B_RS22070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: trbI
locus tag: SL003B_RS22070
old locus tag: SL003B_p0034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020046771.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IncP-type conjugal transfer protein TrbI
translation: MVQSLQLGGAANAEAESGIKRINRLPIVVVIVLVIAFLGVIFYGLTTRGLNFGKDTGPETSSGNPASTFADQIKRGVTDGIIGEPQQQTTFQPTPVETKEEKDKAKNPFTPQPGERQEQQRGQELESEKVWRARLEREQQEQYLRERHRQRMARLQANDAAYDAPLAIDRSKLEARADETTSAGTTTNTASSTTTGATSDLYAAALRAGLGGQNIDPNGQSSKEDFFNADLKDLGYLPKRVVPQQSPFELKRGSVIPATLITGINSDLPGRITAQVSQNVYDSATGHRLLIPQGTKLFGRYDSKVSFGQSRVLVVWTDIIFPNGSTLQIGGMAGTDAQGYGGFHDKVNNHYWRTFGSAALIALIGTGIDASLPESSTLATQDTASDAARRNFAESFGRVAELTISRNLNIQPTLEIRPSYKFNVLVDQDIVFARAYP
SIO_010081: SL003B_RS22070
subclass of: SO_0000673
so part of: SL003B_RS22070
location: complement(46789..48102)
location: region:46789-48102:-1
so has part: feature:46789-48102:-1:exon

WP_013650734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46789-48102:-1:exon

SL003B_RS22075
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: trbH
locus tag: SL003B_RS22075
old locus tag: SL003B_p0035
so part of: sequence
location: complement(48114..48587)
location: region:48114-48587:-1
so has part: feature:48114-48587:-1:exon
subclass of: SO_0000010

position:48114:-1
position: 48114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48587:-1
position: 48587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48114-48587:-1:exon

SL003B_RS22075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: trbH
locus tag: SL003B_RS22075
old locus tag: SL003B_p0035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018325663.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbH
translation: MRNFADNLFLRPIRAIAAAGTFAILLSGCQSMGTDGLVASNAPAEISGPAASAIAGDMVSRLAEQIGPGKATVALKPDASPFGQALEAALKGWGYPVVTDQKTDSGTKIIPLAYVIVPFDGQVLARLSTDSVELGRAYTVTASGATPASALSLMRRG
SIO_010081: SL003B_RS22075
subclass of: SO_0000673
so part of: SL003B_RS22075
location: complement(48114..48587)
location: region:48114-48587:-1
so has part: feature:48114-48587:-1:exon

WP_013650735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48114-48587:-1:exon

SL003B_RS22080
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: trbG
locus tag: SL003B_RS22080
old locus tag: SL003B_p0036
so part of: sequence
location: complement(48587..49411)
location: region:48587-49411:-1
so has part: feature:48587-49411:-1:exon
subclass of: SO_0000010

position:49411:-1
position: 49411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48587-49411:-1:exon

SL003B_RS22080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: trbG
locus tag: SL003B_RS22080
old locus tag: SL003B_p0036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008120548.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MLIAGATASTALAAIALAPLHAFAADGVTANEAKGVSISGQWRGSRGLVTKGADGKVIFLFGEVQPSVVCSPLQVCDIELQGGEVVRDVLVGDTVRWKVEPATSGAAGGQAIHLIVKPSEPGLVTSMVVTTSRRTYHIQLKSHATQYMARVGFEYPEDVSAKLADINARLEASTIPGAGVPAEQLNFSYSVSGRAGWRPTRVYSDGLKTYIQFPRSISGQDAPVLFVTSGGQNRIVNYRMKNDMMVVDYHIDRAVLVSGVGWKQEKVTIRRGGR
SIO_010081: SL003B_RS22080
subclass of: SO_0000673
so part of: SL003B_RS22080
location: complement(48587..49411)
location: region:48587-49411:-1
so has part: feature:48587-49411:-1:exon

WP_242390417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48587-49411:-1:exon

SL003B_RS22085
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22085
old locus tag: SL003B_p0037
so part of: sequence
location: complement(49459..50136)
location: region:49459-50136:-1
so has part: feature:49459-50136:-1:exon
subclass of: SO_0000010

position:49459:-1
position: 49459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50136:-1
position: 50136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49459-50136:-1:exon

SL003B_RS22085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22085
old locus tag: SL003B_p0037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020046774.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbF
translation: MAGRNAPDNTHIANPYLAARNEWNERYGSYVKAAAAWRIVGITGMAMAVIGFTYALYQSTQVKLVPYIVEVDKLGTASNAGFPQQIEYADPRVVRATLGSFVSNFRSVTPDAVVQKQYIDRTYGLLRTSDPATEKVNAWFRSNSPFEKAKTTTVAVEVNNIVALSNQSYQVDWTEFERDRRGKETAVRRFRGIATVTLTPPQDEGVIRLNPIGLYLRDFDWTAQL
SIO_010081: SL003B_RS22085
subclass of: SO_0000673
so part of: SL003B_RS22085
location: complement(49459..50136)
location: region:49459-50136:-1
so has part: feature:49459-50136:-1:exon

WP_013650737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49459-50136:-1:exon

SL003B_RS22090
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: trbL
locus tag: SL003B_RS22090
old locus tag: SL003B_p0038
so part of: sequence
location: complement(50151..51347)
location: region:50151-51347:-1
so has part: feature:50151-51347:-1:exon
subclass of: SO_0000010

position:50151:-1
position: 50151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51347:-1
position: 51347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50151-51347:-1:exon

SL003B_RS22090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: trbL
locus tag: SL003B_RS22090
old locus tag: SL003B_p0038
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010974835.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MVIVRPSRKLELSFISIGLILLVATPALAQQGSVLTTLENSVVTAAKGWETTVMNAARSLFWILAGIEVGIAAVWLAINAASLDSWFAELVRRIMFIGLFAFILDQGPSFAKAVVDSLYQIGAGGGSASPANIFDAGIRVATKMSEQAKFGLWEDNALAIAAVFAMVVVVVSFSLVAAIFVAVMVEMYVGLLAGMIMLGLGGSSFTKDFAVKYLVYAFSVGMKLMALVMIAKIGSDILLGLAEAPTATSEQFITTLAIAGISVVVFVIAMYVPPILQGVVQGASIAGGMEAIRHGGQAATFAAGGAFLGASAATKGAQTASSARAGGSSLAGAALRGMASGIGSAGWAAGSAAKEKAIASPGAYAGSLLGLANAKLDQTRQSGRPTPPPPPPPINENK
SIO_010081: SL003B_RS22090
subclass of: SO_0000673
so part of: SL003B_RS22090
location: complement(50151..51347)
location: region:50151-51347:-1
so has part: feature:50151-51347:-1:exon

WP_013650738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50151-51347:-1:exon

SL003B_RS22095
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: trbK
locus tag: SL003B_RS22095
so part of: sequence
location: complement(51341..51571)
location: region:51341-51571:-1
so has part: feature:51341-51571:-1:exon
subclass of: SO_0000010

position:51341:-1
position: 51341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51571:-1
position: 51571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51341-51571:-1:exon

SL003B_RS22095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: trbK
locus tag: SL003B_RS22095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649097.1
GO process: GO:0009292 - horizontal gene transfer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: entry exclusion protein TrbK
translation: MSPRLVVILVLAGIAALSASVVTWNVIQPRPVPMSGSGTAATRPASETERREHREQFFSGDPDRDIRGGQEMKPRW
SIO_010081: SL003B_RS22095
subclass of: SO_0000673
so part of: SL003B_RS22095
location: complement(51341..51571)
location: region:51341-51571:-1
so has part: feature:51341-51571:-1:exon

WP_041376402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51341-51571:-1:exon

SL003B_RS22100
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: trbJ
locus tag: SL003B_RS22100
old locus tag: SL003B_p0040
so part of: sequence
location: complement(51568..52377)
location: region:51568-52377:-1
so has part: feature:51568-52377:-1:exon
subclass of: SO_0000010

position:51568:-1
position: 51568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52377:-1
position: 52377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51568-52377:-1:exon

SL003B_RS22100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: trbJ
locus tag: SL003B_RS22100
old locus tag: SL003B_p0040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003523577.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MPKHSSRPSKVACATVMAAIMLSAKLPVSAYAGGVTGQATEWTQLANNAELVSLVGKSAEQVNNQITQISQLAEQIQNQLNIYNNLLQNTAQLPNHIWGQVESDLKNLQNVVAQGQGVAFSMGNIDDVLKQRFQSFSEMKSNLPEGASFSTTYQNWSDTNRDTIAGTLKAANLTADQFSSEESTMSQLRSMSETADGQMKALQVGHQIAAQQVAQMQKLRGLVSQQMTMMGTWFQSEQAQKDLAQARREQFFSGTERDIRGGQTMEPRW
SIO_010081: SL003B_RS22100
subclass of: SO_0000673
so part of: SL003B_RS22100
location: complement(51568..52377)
location: region:51568-52377:-1
so has part: feature:51568-52377:-1:exon

WP_041376403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51568-52377:-1:exon

SL003B_RS22105
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22105
old locus tag: SL003B_p0041
so part of: sequence
location: complement(52349..54817)
location: region:52349-54817:-1
so has part: feature:52349-54817:-1:exon
subclass of: SO_0000010

position:52349:-1
position: 52349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54817:-1
position: 54817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52349-54817:-1:exon

SL003B_RS22105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22105
old locus tag: SL003B_p0041
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649099.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbE
translation: MVALKSFRHSGPSFADLVPYAGLVDNGIILLKDGSLMAGWYFAGPDSESSTDAERNEVSRQINAILSRLGSGWMIQVEAIRVPTGDYPTEDDCHFPDPVTRAIDAERRAHFQKERGHFESRHALILTWRPPEPRRSGLTRYVYSDAGSRSATYADKALDSFQTSIREVEQYLANVVSIRRMMTRETSERGGFRVARYDELFQFIRFCITGENHPVRLPEIPMYLDWLVTAELQHGLTPLVENRFLGIVAIDGLPAESWPGILNSLDLMPLTYRWSSRFVFLDAEEARAKLERTRKKWQQKVRPFFDQLFQTQSRSVDQDAMLMVAETEDAIAEASSQLVAYGYYTPVIVLFDEQQARLQEKCEAVRRLIQAEGFGARIETLNATDAFLGSLPGVSYANIREPLINTRNLADLIPLNSVWSGTPVAPCPFYPPGSPPLMQVASGSTPFRLNLHVDDVGHTLIFGPTGSGKSTLLALIAAQFRRYSQAQVFAFDKGGSMLPLTLGLDGDHYQIGGDIGPSAEGEVRALAFCPLAELSTDGDRAWASEWIETLVGLQGVTITPDYRNAISRQIGLMAESRGRSLSDFVSGVQMREIKDALHHYTIDGPMGQLLDAEEDGLALGAFQCFEIEELMNMGERNVVPVLTYLFRRIEKRLTGAPSLIILDEAWLMLGHPVFRDKIREWLKVLRKANCAVVLATQSISDAERSGIIDVLKESCPTKICLPNGAAREPGTREFYERIGFNERQIEIVATALPKREYYVVSPEGRRLFDMALGPVALSFVGASGKEDLKRIRALHSEHGAAWPCPWLQQRGIAHAETFFPAK
SIO_010081: SL003B_RS22105
subclass of: SO_0000673
so part of: SL003B_RS22105
location: complement(52349..54817)
location: region:52349-54817:-1
so has part: feature:52349-54817:-1:exon

WP_013650741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52349-54817:-1:exon

SL003B_RS22110
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22110
old locus tag: SL003B_p0042
so part of: sequence
location: complement(54827..55126)
location: region:54827-55126:-1
so has part: feature:54827-55126:-1:exon
subclass of: SO_0000010

position:54827:-1
position: 54827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55126:-1
position: 55126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54827-55126:-1:exon

SL003B_RS22110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22110
old locus tag: SL003B_p0042
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010892446.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MAEAGSRLSRSRVHRALSRPNLLMGADRELVLLTALAAVILIFVVLTWYAALFGIAIWLIAVAALRMMAKADPLMRRVYVRHISYKAFYRATSSPWRKF
SIO_010081: SL003B_RS22110
subclass of: SO_0000673
so part of: SL003B_RS22110
location: complement(54827..55126)
location: region:54827-55126:-1
so has part: feature:54827-55126:-1:exon

WP_013650742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54827-55126:-1:exon

SL003B_RS22115
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: trbC
locus tag: SL003B_RS22115
old locus tag: SL003B_p0043
so part of: sequence
location: complement(55119..55523)
location: region:55119-55523:-1
so has part: feature:55119-55523:-1:exon
subclass of: SO_0000010

position:55119:-1
position: 55119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55523:-1
position: 55523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55119-55523:-1:exon

SL003B_RS22115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: trbC
locus tag: SL003B_RS22115
old locus tag: SL003B_p0043
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012654970.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer pilin TrbC
translation: MLHKTKITLACLGLAAIALALAEPALASSGGGGLPWESPLQQIQQSITGPVAGFIALAAVAIAGAMLIFGGELNDFARRLCYVALVGGVLLGATQIVALFGATGASIGEVEVRSAPHITEPTEVLRTEGEGAHG
SIO_010081: SL003B_RS22115
subclass of: SO_0000673
so part of: SL003B_RS22115
location: complement(55119..55523)
location: region:55119-55523:-1
so has part: feature:55119-55523:-1:exon

WP_013650743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55119-55523:-1:exon

SL003B_RS22120
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: trbB
locus tag: SL003B_RS22120
old locus tag: SL003B_p0044
so part of: sequence
location: complement(55513..56484)
location: region:55513-56484:-1
so has part: feature:55513-56484:-1:exon
subclass of: SO_0000010

position:55513:-1
position: 55513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56484:-1
position: 56484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55513-56484:-1:exon

SL003B_RS22120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: trbB
locus tag: SL003B_RS22120
old locus tag: SL003B_p0044
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649102.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MTQLRSHPRLVRKLQDALGDQLCVALDDATVVEIMLNPDGRLFIERLGHGVAPAGAMSAATAEVVIGSVAHALQSEADDEQPIISGELPIGGHRFEGLLPPVVSAPAFTIRRRASRLIPLDEYVKSKVMTEAQASVLRSAIASRMNIVISGGTGSGKTTLANAVIAEIVATAPDDRMVILEDTAEIQCAAENAVCLHTTDTVDMARLLKSTMRLRPDRIIVGEVRDGAALTLLKAWNTGHPGGVTTIHSNTAMSALRRLEQLTAEASQQPMQEVIGEAVDLVVSVERTGKGRRVREVIHVEGFGNARYRTEHYAQVDEDSHVA
SIO_010081: SL003B_RS22120
subclass of: SO_0000673
so part of: SL003B_RS22120
location: complement(55513..56484)
location: region:55513-56484:-1
so has part: feature:55513-56484:-1:exon

WP_013650744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55513-56484:-1:exon

SL003B_RS22125
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: traI
locus tag: SL003B_RS22125
old locus tag: SL003B_p0045
so part of: sequence
location: complement(56481..57116)
location: region:56481-57116:-1
so has part: feature:56481-57116:-1:exon
subclass of: SO_0000010

position:56481:-1
position: 56481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57116:-1
position: 57116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56481-57116:-1:exon

SL003B_RS22125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: traI
locus tag: SL003B_RS22125
old locus tag: SL003B_p0045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012649103.1
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-homoserine-lactone synthase TraI
translation: MQILSVSTDHYASNRNHLNQMHRLRAAVFGSRLEWDVTITEQGERDQYDDLLPTYILAISAEQKVVGCARLLPASGTTMLEQTFPQLLERGSLDAQQGIVESSRFCVDTSLPAGRGGSLHQVTLMMFAGIIEWSMANGYSEIVTATDLRFERILNRAGWPMSRLGDPVAIGNTTAVAGSLPADRSSFDRVCPAGYRSIIEHSDAGPFRSAA
SIO_010081: SL003B_RS22125
subclass of: SO_0000673
so part of: SL003B_RS22125
location: complement(56481..57116)
location: region:56481-57116:-1
so has part: feature:56481-57116:-1:exon

WP_013650745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56481-57116:-1:exon

SL003B_RS22130
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: repA
locus tag: SL003B_RS22130
old locus tag: SL003B_p0046
so part of: sequence
location: 57477..58694
location: region:57477-58694:1
so has part: feature:57477-58694:1:exon
subclass of: SO_0000010

position:57477:1
position: 57477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58694:1
position: 58694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57477-58694:1:exon

SL003B_RS22130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: repA
locus tag: SL003B_RS22130
old locus tag: SL003B_p0046
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501263.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepA
translation: MSKAVAISRNDRPSVDVTIGDHAEQLSSQLQAMSEALFPPTSHKSLRKFTSGEAARLMKISDSTLRKMTLAGEGPQPELASNGRRFYTLGQINEIRHMLAGSARGRESIEFVPHRRGSEHLQVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDLDPQASLSALLGVLPETDVGANETLYAAIRYDDARRPLKEVIRSTYFDGLHLVPGNLELMEFEHTTPKALTDRGSRDGLFFTRVAQAFDEVADDYDVVVIDCPPQLGFLTLSGLCAATSMVITVHPQMLDIASMSQFLLMTRDLLGVVKEAGGNLQYDFIRYLLTRFEPQDAPQTKVAALLRNMFDDHVLTNPMVKSAAVSDAGLTKQTLYEIGRENLTRSTYDRAMEALDAVNAEIEGLIKAAWGRS
SIO_010081: SL003B_RS22130
subclass of: SO_0000673
so part of: SL003B_RS22130
location: 57477..58694
location: region:57477-58694:1
so has part: feature:57477-58694:1:exon

WP_013650746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57477-58694:1:exon

SL003B_RS22135
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: repB
locus tag: SL003B_RS22135
old locus tag: SL003B_p0047
so part of: sequence
location: 58917..59930
location: region:58917-59930:1
so has part: feature:58917-59930:1:exon
subclass of: SO_0000010

position:58917:1
position: 58917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59930:1
position: 59930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58917-59930:1:exon

SL003B_RS22135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: repB
locus tag: SL003B_RS22135
old locus tag: SL003B_p0047
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013650747.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepB
translation: MSRKDAIDSLFLKKPVVSEKAATDKSAARVRTGAISAMGSSLQEMAEGAKTAARLQDQLASGEAVVSLDPSMIEGSTIADRLPTAIDPKFDQLKASIAENGQQVPILVRPHPEKTGRYQIAYGRRRLRAAIDLGREVSAIVRSLTDRELVVAQGRENLDRADLSFIEKALFALRLEDAGFDRATITAALSTDKSDLSRYIAVARSIPEKLAIQIGPAAKAGRSRWAALAESLGKPKVMDAVEAILGSERFLAADSDARFALIFDVASKRSAKPSRKVKNWSTPKGKKAARIQLETGKTALIFDEKLVPSFGEYVADQLDRLYVQFLETNEGEKADRG
SIO_010081: SL003B_RS22135
subclass of: SO_0000673
so part of: SL003B_RS22135
location: 58917..59930
location: region:58917-59930:1
so has part: feature:58917-59930:1:exon

WP_013650747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58917-59930:1:exon

SL003B_RS22140
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: repC
locus tag: SL003B_RS22140
old locus tag: SL003B_p0048
so part of: sequence
location: 60140..61459
location: region:60140-61459:1
so has part: feature:60140-61459:1:exon
subclass of: SO_0000010

position:60140:1
position: 60140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61459:1
position: 61459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60140-61459:1:exon

SL003B_RS22140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: repC
locus tag: SL003B_RS22140
old locus tag: SL003B_p0048
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013650748.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MQTHISTTPFGRRAMTLGHIASQMTAKAVSPEAAAHKWQVFQHIREARELIGATDRSLSILNALLSFHPETSLSGDAELVVWPSNEQLAARANGMPATTLRRHIAVLVDCGLIIRRDSPNGKRFARKGRGGEIEQAYGFDLSPIVARADEFRDLVEALQAEKKAFRVAKERLTLLRRDIVKMIETGIEENVPGNWGRITQTYQAIIARLPRSAPRELVECIAQELHELCVDIRDVLESFAKTKIPDANESHFGRHIQNSKPDSNFESEYGLGERKEASGSVAETDNLRSLPKRELSLGIVLDACPQIRELAQGGAIRHWRDLLATAELARPMLGISPSAWREAREAMGEQHAAITLAAIYQKASQINNAGGYLRSLTDRAKEGQFSTWPMVMALLRAKLDAQRSVDFQDGAQSDGGAEAGDRLQVSDSLLKSLQRPKSR
SIO_010081: SL003B_RS22140
subclass of: SO_0000673
so part of: SL003B_RS22140
location: 60140..61459
location: region:60140-61459:1
so has part: feature:60140-61459:1:exon

WP_013650748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60140-61459:1:exon

SL003B_RS22145
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22145
old locus tag: SL003B_p0049
so part of: sequence
location: complement(61471..62421)
location: region:61471-62421:-1
so has part: feature:61471-62421:-1:exon
subclass of: SO_0000010

position:61471:-1
position: 61471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62421:-1
position: 62421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61471-62421:-1:exon

SL003B_RS22145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22145
old locus tag: SL003B_p0049
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501258.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MARDAQNRSSRRPQGRLIGYARVSTDEQATEAQEIELRSAGCDVIVQEHGSGAARARPALSKVLGEINAGDTLIVVRLDRLARSVSHLLEVIEDLTAKNAHFRSLRDPIDTSTPQGMFSLQVLGAVAQLERALISERTKAGIKAAKSKGKLPGNPGIRERRPEALAKMTAAQRAAYGERVQATANQWLPTVRRMRPDHTWDDIARVLNQRDLDWTPERLRRAVKWMVAERMADAALLRKSPPRLPEDRLMTLVAGIHSSNPNLTLREIATQLERLHERTPRGGSKWSPSSVKNLIDRARRSGLIASPSDTAAPLAG
SIO_010081: SL003B_RS22145
subclass of: SO_0000673
so part of: SL003B_RS22145
location: complement(61471..62421)
location: region:61471-62421:-1
so has part: feature:61471-62421:-1:exon

WP_013650749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61471-62421:-1:exon

SL003B_RS22150
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22150
old locus tag: SL003B_p0050
so part of: sequence
location: 62706..63827
location: region:62706-63827:1
so has part: feature:62706-63827:1:exon
subclass of: SO_0000010

position:62706:1
position: 62706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63827:1
position: 63827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62706-63827:1:exon

SL003B_RS22150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22150
old locus tag: SL003B_p0050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006472551.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RHE_PE00001 family protein
translation: MAYEIEKLPLETLLPAIARAEDRLARLDEVIRRSAVGDGFVERGHFFDAAASMWVAGELVHVEDLVLHDAQMDIRAPTHELTIGHTILRARRRIFGADPAWAVSEGGVAALTGAVLGAERQQEFALAGRAGEGSVDLDDDEDGVLAREFADIDAIISRSQRVLDALSDGSAPTSAARPSLAVGDLVIRDPDWDEAERLSQWRSVLKCAETLPPALAAVLLYDAWESLEPVQRQHWLGGQLVVAYLRSSGKIISHLLAYNVGLKAVPRERRRARERTTRLLAFLEAMSIAAEAGMKEIVRLNQARDQMERRMRGRRSSSSLPAVIDLILSRPIVSASMIAKAAGVTPRGALNLIGELGAREMTGRGRCRAWGVL
SIO_010081: SL003B_RS22150
subclass of: SO_0000673
so part of: SL003B_RS22150
location: 62706..63827
location: region:62706-63827:1
so has part: feature:62706-63827:1:exon

WP_013650750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62706-63827:1:exon

SL003B_RS23015
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS23015
old locus tag: SL003B_p0051
so part of: sequence
location: 63972..65048
location: region:63972-65048:1
so has part: feature:63972-65048:1:exon
subclass of: SO_0000010

position:63972:1
position: 63972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65048:1
position: 65048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63972-65048:1:exon

SL003B_RS23015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS23015
old locus tag: SL003B_p0051
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003501469.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV toxin-antitoxin system AbiEi family antitoxin
translation: MLKTDDSLNELESQAAKVVEGLLQSVPVLRINKVELTSPRSGVDILVELNIDGHHHFLVCEVKPAGQPRHVRAALLQLHKAADHFDPPATPIFIAPYLSPDAQALCREFNVGFIDFVGNARIAFESVFIERQVDAKPPAVHRSLKSIFKPKSAQVLRVLLRDPIRPWRVADLAQASDVSLGHVSNVRSELVDREWAEVTEDGLRLSQPDGLLDSWREAYEAPAGERMSFYTTLHGQSLEASARGALGAQEGYPHAAFASFSAAHWLAPYGRVATQHFYADAAGLNRLRDALKLSPAASGANVVVTVLKDRGLFNDIVEPAPNVICTSPVQTYLDLSIAGERGAEAAEHLRKELLSWRK
SIO_010081: SL003B_RS23015
subclass of: SO_0000673
so part of: SL003B_RS23015
location: 63972..65048
location: region:63972-65048:1
so has part: feature:63972-65048:1:exon

WP_003501469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63972-65048:1:exon

SL003B_RS22160
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS22160
old locus tag: SL003B_p0052
so part of: sequence
location: 65036..65905
location: region:65036-65905:1
so has part: feature:65036-65905:1:exon
subclass of: SO_0000010

position:65036:1
position: 65036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65905:1
position: 65905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65036-65905:1:exon

SL003B_RS22160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS22160
old locus tag: SL003B_p0052
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017685527.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
translation: MAKIVPPEPQSAADYEDRTTKAVKGVLVEIGQILGSFKGKFAVIGGAVPWLLLDNEDMPHVGTLDVDLGLDAEALGDGEYVNLVEALLGNGYKQREELRRFQLVRQVPVNDGGAPIDIVVDFLMPRHAEIVKNSPPILSDFAVQRADGADLALRFYQLVAISGDMPEGGTNRVEVAVCSIPALLAMKGYALNGRHKQKDAYDIYYCIRNYPDGIEALAAACKPLLEHESGSQGYQYIAEKFDAPEGYGPTSVRKFVAETDILDGRTPEQWQQDAFGQVDAWLRALGLRH
SIO_010081: SL003B_RS22160
subclass of: SO_0000673
so part of: SL003B_RS22160
location: 65036..65905
location: region:65036-65905:1
so has part: feature:65036-65905:1:exon

WP_035243691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65036-65905:1:exon

SL003B_RS23020
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
locus tag: SL003B_RS23020
old locus tag: SL003B_p0053
so part of: sequence
location: 65958..67265
location: region:65958-67265:1
so has part: feature:65958-67265:1:exon
subclass of: SO_0000010

position:65958:1
position: 65958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67265:1
position: 67265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65958-67265:1:exon

SL003B_RS23020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
locus tag: SL003B_RS23020
old locus tag: SL003B_p0053
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MGSSGSRWLRWEPHIHAPGTVLNDQFNATDSWEQYLTRIEMAAPVIRALGVTDYYLLDTYERVRDAKHRDGRLPGVDLVFPNVELRLAFGTVKGNWVNCHLLVNPQDPDHVGATQRFLAQLTFEYSGDRFACTPDELTRLGSRIDPGLSGRAALARGATQFKVSFEQLVELYRAIDWAQANVLIAVAGSEHDGTSGMRGEAEGAQRQEVERFAHIIFASSISQRDFWLGRKSSATPDDIRSRYGALKPCLHGSDAHETAKVGAPDGDRYSWVKGGAHFDSLRQAVIDPAGRAFVGAAPPTRATPSQVISCVTIQNADWAATPVVELNPGLVAIIGARGSGKTALADAIAAGCDAASEHLSPASFLLRAGDLLEGASVRLDWGSGDPSERDLLDYDYDAELDGRFPRACQRRSKSRPLGGVKVGHLTPHAGNVGRA
SIO_010081: SL003B_RS23020
subclass of: SO_0000673
so part of: SL003B_RS23020
location: 65958..67265
location: region:65958-67265:1
so has part: feature:65958-67265:1:exon

WP_013650751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65958-67265:1:exon

SL003B_RS22170
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: istB
locus tag: SL003B_RS22170
old locus tag: SL003B_p0054
so part of: sequence
location: complement(67314..68084)
location: region:67314-68084:-1
so has part: feature:67314-68084:-1:exon
subclass of: SO_0000010

position:67314:-1
position: 67314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68084:-1
position: 68084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67314-68084:-1:exon

SL003B_RS22170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: istB
locus tag: SL003B_RS22170
old locus tag: SL003B_p0054
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003495445.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MSTQASDNPPAILLSHTLKTLKLPTFQREYQKLARLCATQGVDHVGYLTRLAEQEMIERDRRKVERRIKAARFPVVKSLDSFDFAAIPKLNKMQVLELARCEWVERRENVIALGPSGTGKTHVALGLGLAACQKGLSVGFTTAAALVSEMMEARDERRLLRFQKQMAAYKLLIIDELGFVPLSKTGAELLFELIAQRYERGATLITSNLPFDEWTETLGSERLTGALLDRLTHHVNILEMNGDSYRLAQSRARRAG
SIO_010081: SL003B_RS22170
subclass of: SO_0000673
so part of: SL003B_RS22170
location: complement(67314..68084)
location: region:67314-68084:-1
so has part: feature:67314-68084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67314-68084:-1:exon

SL003B_RS22175
type: Gene
subclass of: SO_0000704
RO_0002162: 991905
gene: istA
locus tag: SL003B_RS22175
old locus tag: SL003B_p0055
so part of: sequence
location: complement(68081..69535)
location: region:68081-69535:-1
so has part: feature:68081-69535:-1:exon
subclass of: SO_0000010

position:68081:-1
position: 68081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69535:-1
position: 69535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68081-69535:-1:exon

SL003B_RS22175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 991905
gene: istA
locus tag: SL003B_RS22175
old locus tag: SL003B_p0055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_052096176.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MSRRQAAKHFNISRDSVSKMLSYSTPPGYRRQAPVRRPKLDAFVSTIDHWMDEDLKVPRKQRHTAKRVFDRLRAECGFTGGYTIIKDYMREREQRRQEVFVPLSHPPGHAQADFGEAVVVIGGVEQKAHFFVLDLPHSDACYVRAYPAAVSEAWIDGHVHAFAFFGAVPQSIVYDNDRCLVSKILADGTRKRTVLFSGFLSHYLIRDRYGRPGKGNDKGSVEGLVGYARRNFMVPIPRFATWDEFNAWLEEQCRKRQRDRLRGESETIAERLQRDLAAMRPLPASPFEACDQASGRVSSQALVRYRTNDYSVPVAFGHQDVWIRGYVDEVVIGCRGEIIARHPRSWEREDVVFDPLHYLPLIEQKINALDQAAPLQGWDLPEAFATLRRLMEARMAKHGRREYVQVLRLLESFELADLHVAVKQALQIGAIGFDAVKHLLLCQVERRPPRLDLSIYPYLPRATVEKTSAKAYMRLLSTHAGDAA
SIO_010081: SL003B_RS22175
subclass of: SO_0000673
so part of: SL003B_RS22175
location: complement(68081..69535)
location: region:68081-69535:-1
so has part: feature:68081-69535:-1:exon

WP_083812193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68081-69535:-1:exon