Anaerotignum propionicum DSM 1682 strain X2 chromosome, complete genome.
Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae; Anaerotignum.
Complete Genome Sequence of the Amino Acid-Fermenting Clostridium propionicum X2 (DSM 1682)
Submitted (28-JAN-2016) Genomic and Applied Microbiology & Goettingen Genomics Laboratory, Georg-August-University Goettingen, Grisebachstr. 8, Goettingen, Lower Saxony 37077, Germany
REFSEQ INFORMATION: The reference sequence is identical to\nCP014223.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Mira v. 3.4\nGenome Coverage :: 117x\nSequencing Technology :: Sanger dideoxy sequencing; 454; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 20:18:08\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,005\nCDSs (total) :: 2,918\nGenes (coding) :: 2,872\nCDSs (with protein) :: 2,872\nGenes (RNA) :: 87\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 61\nncRNAs :: 4\nPseudo Genes (total) :: 46\nCDSs (without protein) :: 46\nPseudo Genes (ambiguous residues) :: 0 of 46\nPseudo Genes (frameshifted) :: 23 of 46\nPseudo Genes (incomplete) :: 28 of 46\nPseudo Genes (internal stop) :: 5 of 46\nPseudo Genes (multiple problems) :: 9 of 46\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_011947895.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_004035242.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035240.1
RNA-binding S4 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004035238.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015552751.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_006427120.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF021127.2
COORDINATES: protein motif:HMM:NF019349.2
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004035274.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00147.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0001727 - lipid kinase activity [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008708026.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035280.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF025935.2
COORDINATES: protein motif:HMM:TIGR00099.1
COORDINATES: similar to AA sequence:RefSeq:WP_004607096.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF00442
guanidine-I (ykkC/yxkD leader) riboswitch; Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria; This is class of guanidine riboswitches is based on the ykkC/yxkD leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_010073336.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
quaternary ammonium compound efflux SMR transporter SugE
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: similar to AA sequence:RefSeq:WP_005540734.1
COORDINATES: similar to AA sequence:RefSeq:WP_006426906.1
GO:0140110 - transcription regulator activity [Evidence IEA]
GO:0030436 - asexual sporulation [Evidence IEA]
sporulation transcriptional regulator SpoIIID
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008398832.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017211126.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003418513.1
COORDINATES: similar to AA sequence:RefSeq:WP_020492164.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013498996.1
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
carbamoyl phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006353306.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015537642.1
GO:0008483 - transaminase activity [Evidence IEA]
GO:0006525 - arginine metabolic process [Evidence IEA]
acetylornithine/succinylornithine family transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_006574543.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013484115.1
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: similar to AA sequence:RefSeq:WP_005352835.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_008392408.1
COORDINATES: similar to AA sequence:RefSeq:WP_004611267.1
COORDINATES: similar to AA sequence:RefSeq:WP_009066601.1
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011462263.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035734.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_012720679.1
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003503568.1
COORDINATES: protein motif:HMM:NF015284.2
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_018596766.1
GO:0005416 - amino acid:monoatomic cation symporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009289042.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035427.1
COORDINATES: similar to AA sequence:RefSeq:WP_016147984.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012199581.1
COORDINATES: protein motif:HMM:NF017470.2
COORDINATES: similar to AA sequence:RefSeq:WP_015390489.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035803.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_005816704.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004847871.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014311767.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037670.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009320984.1
COORDINATES: similar to AA sequence:RefSeq:WP_012201786.1
D-alanine--D-alanine ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003425992.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003504516.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: similar to AA sequence:RefSeq:WP_004038074.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014683.2
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015129 - lactate transmembrane transporter activity [Evidence IEA]
GO:0015727 - lactate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014119182.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011861504.1
COORDINATES: similar to AA sequence:RefSeq:WP_009066533.1
COORDINATES: similar to AA sequence:RefSeq:WP_008393791.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013658653.1
nucleoside recognition domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004035474.1
COORDINATES: protein motif:HMM:NF024907.2
COORDINATES: similar to AA sequence:RefSeq:WP_004035644.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
signal recognition particle sRNA large type
COORDINATES: nucleotide motif:Rfam:14.4:RF01854
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004037980.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037982.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_012634696.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF018448.2
threonine/serine exporter family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_007061672.1
GO:0050334 - thiaminase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015392927.1
COORDINATES: similar to AA sequence:RefSeq:WP_003412704.1
COORDINATES: similar to AA sequence:RefSeq:WP_003427631.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020074245.1
COORDINATES: protein motif:HMM:NF015587.2
YihY/virulence factor BrkB family protein
COORDINATES: protein motif:HMM:NF019450.2
copper amine oxidase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037569.1
COORDINATES: protein motif:HMM:TIGR00912.1
GO:0009847 - spore germination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02887.1
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0009847 - spore germination [Evidence IEA]
Ger(x)C family spore germination protein
COORDINATES: protein motif:HMM:TIGR02837.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: protein motif:HMM:NF018644.2
COORDINATES: similar to AA sequence:RefSeq:WP_005336385.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02210.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037552.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0000918 - division septum site selection [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_013121372.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01222.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: protein motif:HMM:NF016019.2
COORDINATES: protein motif:HMM:TIGR00219.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037540.1
COORDINATES: similar to AA sequence:RefSeq:WP_009261847.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037534.1
RnfABCDGE type electron transport complex subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_003419046.1
GO:0022900 - electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037530.1
COORDINATES: protein motif:HMM:TIGR01947.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
RnfABCDGE type electron transport complex subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_011099268.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_009536617.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02395.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012382.2
PLP-dependent aminotransferase family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_016438975.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037425.1
COORDINATES: similar to AA sequence:RefSeq:WP_018589544.1
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid transport system II carrier protein
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037405.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036077.1
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005333734.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein DctP
COORDINATES: similar to AA sequence:RefSeq:WP_006873684.1
COORDINATES: similar to AA sequence:RefSeq:WP_014186521.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037399.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006862568.1
GO:0016793 - triphosphoric monoester hydrolase activity [Evidence IEA]
deoxyguanosinetriphosphate triphosphohydrolase
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035813.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF016689.2
COORDINATES: similar to AA sequence:RefSeq:WP_004035818.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_004035819.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:NF013155.2
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF014237.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: similar to AA sequence:RefSeq:WP_004034114.1
COORDINATES: protein motif:HMM:NF014626.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]
SOS response-associated peptidase family protein
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: similar to AA sequence:RefSeq:WP_009248958.1
COORDINATES: similar to AA sequence:RefSeq:WP_006781945.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
LytS/YhcK type 5TM receptor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007712470.1
LytTR family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002581668.1
GO:0009267 - cellular response to starvation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017415979.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018593692.1
class I SAM-dependent rRNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014119392.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009246476.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037447.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016207313.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158795.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009061238.1
folate family ECF transporter S component
COORDINATES: nucleotide motif:Rfam:14.4:RF01831
THF riboswitches regulate genes encoding folate transporters and folate metabolism; They are most commonly found in Clostridiales and Lactobacillales; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012201021.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012343238.1
SufD family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_007711710.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF040441.1
COORDINATES: similar to AA sequence:RefSeq:WP_015552988.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037507.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004037509.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0051775 - response to redox state [Evidence IEA]
redox-sensing transcriptional repressor Rex
COORDINATES: protein motif:HMM:NF013933.2
COORDINATES: similar to AA sequence:RefSeq:WP_009462057.1
COORDINATES: similar to AA sequence:RefSeq:WP_014521105.1
COORDINATES: similar to AA sequence:RefSeq:WP_017413446.1
COORDINATES: similar to AA sequence:RefSeq:WP_019161436.1
COORDINATES: similar to AA sequence:RefSeq:WP_019161435.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_008718361.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322054.1
COORDINATES: similar to AA sequence:RefSeq:WP_003518901.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008705726.1
COORDINATES: protein motif:HMM:NF009814.0
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0001680 - tRNA 3'-terminal CCA addition [Evidence IEA]
COORDINATES: protein motif:HMM:NF019911.2
COORDINATES: similar to AA sequence:RefSeq:WP_004035853.1
COORDINATES: similar to AA sequence:RefSeq:WP_014116415.1
GO:0005298 - proline:sodium symporter activity [Evidence IEA]
GO:0015824 - proline transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007861707.1
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF020571.2
COORDINATES: similar to AA sequence:RefSeq:WP_015529160.1
COORDINATES: similar to AA sequence:RefSeq:WP_002566422.1
COORDINATES: similar to AA sequence:RefSeq:WP_003518879.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010248399.1
COORDINATES: similar to AA sequence:RefSeq:WP_015513647.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037624.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_014315318.1
COORDINATES: protein motif:HMM:NF025569.2
COORDINATES: similar to AA sequence:RefSeq:WP_012742285.1
COORDINATES: protein motif:HMM:NF021120.2
YhcN/YlaJ family sporulation lipoprotein
COORDINATES: protein motif:HMM:NF012613.2
S-layer homology domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004037918.1
COORDINATES: protein motif:HMM:TIGR02870.1
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: similar to AA sequence:RefSeq:WP_015358179.1
COORDINATES: similar to AA sequence:RefSeq:WP_013658373.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_007492156.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012720869.1
COORDINATES: similar to AA sequence:RefSeq:WP_002603451.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002603452.1
COORDINATES: similar to AA sequence:RefSeq:WP_016296548.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:NF024919.2
COORDINATES: similar to AA sequence:RefSeq:WP_096348788.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00005.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037928.1
COORDINATES: protein motif:HMM:NF018076.2
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006442146.1
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004037924.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037922.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF019142.2
GO:0019867 - outer membrane [Evidence IEA]
GO:0009254 - peptidoglycan turnover [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035654.1
COORDINATES: similar to AA sequence:RefSeq:WP_015359939.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009246877.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035906.1
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: protein motif:HMM:TIGR01668.1
GO:0008962 - phosphatidylglycerophosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013656755.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013274619.1
COORDINATES: similar to AA sequence:RefSeq:WP_008401825.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF013250.2
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002601154.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524998.1
COORDINATES: similar to AA sequence:RefSeq:WP_014312746.1
COORDINATES: similar to AA sequence:RefSeq:WP_012198795.1
COORDINATES: similar to AA sequence:RefSeq:WP_009528157.1
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014312743.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]; GO:0046110 - xanthine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004034156.1
COORDINATES: protein motif:HMM:NF016623.2
divergent polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006597709.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035592.1
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: similar to AA sequence:RefSeq:WP_005331618.1
COORDINATES: similar to AA sequence:RefSeq:WP_010681293.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037848.1
COORDINATES: similar to AA sequence:RefSeq:WP_003430905.1
COORDINATES: similar to AA sequence:RefSeq:WP_015529763.1
COORDINATES: similar to AA sequence:RefSeq:WP_016148621.1
COORDINATES: similar to AA sequence:RefSeq:WP_015567990.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037839.1
COORDINATES: protein motif:HMM:NF018591.2
COORDINATES: similar to AA sequence:RefSeq:WP_015358263.1
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: similar to AA sequence:RefSeq:WP_003416637.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009462232.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037820.1
COORDINATES: similar to AA sequence:RefSeq:WP_006856999.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: similar to AA sequence:RefSeq:WP_004844415.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004620416.1
type A chloramphenicol O-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004037808.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002584123.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002584107.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009064150.1
flagellar hook-basal body complex protein FliE
COORDINATES: protein motif:HMM:TIGR00206.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: similar to AA sequence:RefSeq:WP_009266744.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF014196.2
COORDINATES: similar to AA sequence:RefSeq:WP_013274058.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035497.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: protein motif:HMM:NF013980.2
SprT family zinc-dependent metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_019189447.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: protein motif:HMM:NF020479.2
COORDINATES: similar to AA sequence:RefSeq:WP_006905403.1
COORDINATES: similar to AA sequence:RefSeq:WP_009243355.1
COORDINATES: protein motif:HMM:NF039453.1
COORDINATES: similar to AA sequence:RefSeq:WP_008976794.1
COORDINATES: protein motif:HMM:NF014689.2
COORDINATES: similar to AA sequence:RefSeq:WP_004038797.1
GO:0005388 - P-type calcium transporter activity [Evidence IEA]
GO:0006816 - calcium ion transport [Evidence IEA]
calcium-translocating P-type ATPase, PMCA-type
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF021619.2
PocR ligand-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004038788.1
GO:0008175 - tRNA methyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL
COORDINATES: similar to AA sequence:RefSeq:WP_004038791.1
COORDINATES: protein motif:HMM:NF022641.2
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: similar to AA sequence:RefSeq:WP_006857076.1
COORDINATES: protein motif:HMM:NF025854.2
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012159003.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_013486332.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
anaerobic ribonucleoside triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_007889450.1
COORDINATES: similar to AA sequence:RefSeq:WP_015524137.1
COORDINATES: similar to AA sequence:RefSeq:WP_009263905.1
COORDINATES: protein motif:HMM:TIGR02785.1
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
GO:0000724 - double-strand break repair via homologous recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005817546.1
COORDINATES: similar to AA sequence:RefSeq:WP_005817545.1
COORDINATES: similar to AA sequence:RefSeq:WP_012738648.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_012198377.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_004038780.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004038778.1
N-acetylmuramoyl-L-alanine amidase family protein
COORDINATES: protein motif:HMM:NF018271.2
COORDINATES: similar to AA sequence:RefSeq:WP_015359019.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004036001.1
GO:0047429 - nucleoside triphosphate diphosphatase activity [Evidence IEA]
GO:0009143 - nucleoside triphosphate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: similar to AA sequence:RefSeq:WP_009535500.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002600895.1
COORDINATES: similar to AA sequence:RefSeq:WP_002570724.1
undecaprenyl diphosphate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019225771.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037350.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039834.1
COORDINATES: protein motif:HMM:NF014704.2
GO:0009403 - toxin biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_011989389.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656997.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009250216.1
COORDINATES: similar to AA sequence:RefSeq:WP_002610489.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
autorepressor SdpR family transcription factor
COORDINATES: protein motif:HMM:NF025015.2
COORDINATES: similar to AA sequence:RefSeq:WP_016286222.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
putative manganese-dependent inorganic diphosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_002602282.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013809928.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273889.1
COORDINATES: similar to AA sequence:RefSeq:WP_010963484.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_004465526.1
COORDINATES: similar to AA sequence:RefSeq:WP_014079523.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002576827.1
FeoB-associated Cys-rich membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_002588481.1
COORDINATES: similar to AA sequence:RefSeq:WP_003526346.1
COORDINATES: similar to AA sequence:RefSeq:WP_009248545.1
COORDINATES: similar to AA sequence:RefSeq:WP_008374092.1
COORDINATES: similar to AA sequence:RefSeq:WP_004442058.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002569714.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038644.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909140.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_003514326.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_002848883.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002569742.1
COORDINATES: similar to AA sequence:RefSeq:WP_013120725.1
COORDINATES: similar to AA sequence:RefSeq:WP_006861089.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01750
ZMP/ZTP riboswitches appear to regulate genes involved in one-carbon metabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
5-aminoimidazole-4-carboxamide ribonucleotide (ZMP)/ 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-triphosphate (ZMT)
COORDINATES: similar to AA sequence:RefSeq:WP_009756978.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013280695.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
tetrahydrofolate dehydrogenase/cyclohydrolase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004035677.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: similar to AA sequence:RefSeq:WP_004035675.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015395605.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035667.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: similar to AA sequence:RefSeq:WP_005610036.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012200564.1
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_008370482.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015529220.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_015545202.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_012634577.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034182.1
COORDINATES: similar to AA sequence:RefSeq:WP_012199678.1
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004038608.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: protein motif:HMM:NF024082.2
COORDINATES: similar to AA sequence:RefSeq:WP_004038657.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00966.2
COORDINATES: similar to AA sequence:RefSeq:WP_004035022.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035023.1
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_004038693.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02227.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038706.1
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: protein motif:HMM:NF025636.2
TetR-like C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013977471.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038653.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: protein motif:HMM:NF013126.2
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004035018.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_003517065.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035014.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035012.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008725611.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038549.1
COORDINATES: similar to AA sequence:RefSeq:WP_004081000.1
COORDINATES: similar to AA sequence:RefSeq:WP_004623857.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0042173 - regulation of sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004852314.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_005609539.1
COORDINATES: similar to AA sequence:RefSeq:WP_004033721.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015358435.1
COORDINATES: similar to AA sequence:RefSeq:WP_015548507.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037989.1
COORDINATES: similar to AA sequence:RefSeq:WP_002297576.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: protein motif:HMM:NF025635.2
COORDINATES: similar to AA sequence:RefSeq:WP_004611056.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004038750.1
COORDINATES: similar to AA sequence:RefSeq:WP_018593155.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038718.1
GO:0004413 - homoserine kinase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004038716.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009062228.1
COORDINATES: protein motif:HMM:NF012464.2
COORDINATES: similar to AA sequence:RefSeq:WP_006354990.1
COORDINATES: similar to AA sequence:RefSeq:WP_020074202.1
COORDINATES: similar to AA sequence:RefSeq:WP_015758258.1
COORDINATES: similar to AA sequence:RefSeq:WP_002576053.1
COORDINATES: protein motif:HMM:NF024065.2
COORDINATES: protein motif:HMM:NF022460.2
COORDINATES: protein motif:HMM:NF014669.2
COORDINATES: similar to AA sequence:RefSeq:WP_004038638.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009288893.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002843909.1
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009255927.1
COORDINATES: protein motif:HMM:NF013630.2
COORDINATES: similar to AA sequence:RefSeq:WP_016284150.1
COORDINATES: similar to AA sequence:RefSeq:WP_007883324.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007785544.1
COORDINATES: similar to AA sequence:RefSeq:WP_009289970.1
COORDINATES: similar to AA sequence:RefSeq:WP_015359528.1
COORDINATES: similar to AA sequence:RefSeq:WP_018307517.1
COORDINATES: similar to AA sequence:RefSeq:WP_006715254.1
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: similar to AA sequence:RefSeq:WP_016206087.1
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:NF024909.2
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF016202.2
COORDINATES: similar to AA sequence:RefSeq:WP_004036172.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036174.1
COORDINATES: similar to AA sequence:RefSeq:WP_018593515.1
COORDINATES: similar to AA sequence:RefSeq:WP_005361842.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0070403 - NAD+ binding [Evidence IEA]; GO:0034979 - NAD-dependent protein deacetylase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_011460196.1
COORDINATES: protein motif:HMM:NF038403.1
permease prefix domain 1-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015516773.1
COORDINATES: similar to AA sequence:RefSeq:WP_005362589.1
GO:0046914 - transition metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006443210.1
COORDINATES: similar to AA sequence:RefSeq:WP_015549034.1
COORDINATES: similar to AA sequence:RefSeq:WP_009249946.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014763.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014117376.1
COORDINATES: protein motif:HMM:NF024084.2
COORDINATES: similar to AA sequence:RefSeq:WP_006428500.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357639.1
COORDINATES: similar to AA sequence:RefSeq:WP_004033877.1
COORDINATES: similar to AA sequence:RefSeq:WP_015395381.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034811.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034807.1
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010964317.1
GO:0004795 - threonine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012101370.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015617385.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015534945.1
COORDINATES: similar to AA sequence:RefSeq:WP_008624114.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034789.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017353789.1
COORDINATES: similar to AA sequence:RefSeq:WP_004611883.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013274338.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034781.1
COORDINATES: similar to AA sequence:RefSeq:WP_009001861.1
COORDINATES: similar to AA sequence:RefSeq:WP_009267279.1
COORDINATES: similar to AA sequence:RefSeq:WP_012741333.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004034767.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034766.1
COORDINATES: similar to AA sequence:RefSeq:WP_009243086.1
COORDINATES: similar to AA sequence:RefSeq:WP_007885948.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034763.1
COORDINATES: similar to AA sequence:RefSeq:WP_013274328.1
COORDINATES: similar to AA sequence:RefSeq:WP_003022786.1
COORDINATES: similar to AA sequence:RefSeq:WP_015553834.1
COORDINATES: similar to AA sequence:RefSeq:WP_008372550.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002566498.1
COORDINATES: similar to AA sequence:RefSeq:WP_004607282.1
COORDINATES: similar to AA sequence:RefSeq:WP_009461298.1
COORDINATES: similar to AA sequence:RefSeq:WP_004074878.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034733.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034731.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004034730.1
KOW domain-containing RNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012201639.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:WP_016285758.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011967531.1
COORDINATES: similar to AA sequence:RefSeq:WP_015528283.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004034711.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004034709.1
COORDINATES: similar to AA sequence:RefSeq:WP_002582636.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_005611592.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034696.1
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_005602663.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034694.1
COORDINATES: similar to AA sequence:RefSeq:WP_012743748.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038124.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038122.1
GO:0070573 - metallodipeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004038133.1
COORDINATES: similar to AA sequence:RefSeq:WP_009984047.1
ribosome assembly RNA-binding protein YhbY
COORDINATES: protein motif:HMM:NF022635.2
COORDINATES: similar to AA sequence:RefSeq:WP_013985595.1
GO:0009435 - NAD biosynthetic process [Evidence IEA]
nicotinate-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00488.1
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK
COORDINATES: similar to AA sequence:RefSeq:WP_004035762.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014080078.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008393729.1
COORDINATES: protein motif:HMM:NF019874.2
COORDINATES: similar to AA sequence:RefSeq:WP_014186128.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158598.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: similar to AA sequence:RefSeq:WP_004035763.1
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007871575.1
COORDINATES: similar to AA sequence:RefSeq:WP_003506951.1
COORDINATES: similar to AA sequence:RefSeq:WP_016205644.1
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007871553.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004079243.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036179.1
COORDINATES: similar to AA sequence:RefSeq:WP_010294309.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
class II fructose-1,6-bisphosphate aldolase
COORDINATES: protein motif:HMM:NF013421.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: similar to AA sequence:RefSeq:WP_014116375.1
COORDINATES: similar to AA sequence:RefSeq:WP_009005684.1
COORDINATES: protein motif:HMM:NF019265.2
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: protein motif:HMM:NF024785.2
ATP phosphoribosyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006354330.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008980126.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009324634.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009256671.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_005929647.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_007046065.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_010168637.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_006354323.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
COORDINATES: protein motif:HMM:TIGR01856.1
COORDINATES: similar to AA sequence:RefSeq:WP_009987653.1
COORDINATES: similar to AA sequence:RefSeq:WP_009535785.1
COORDINATES: protein motif:HMM:NF012730.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013540.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017520.2
COORDINATES: protein motif:HMM:NF022117.2
BppU family phage baseplate upper protein
COORDINATES: similar to AA sequence:RefSeq:WP_018306128.1
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0032775 - DNA methylation on adenine [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019976.2
nuclease-related domain-containing protein
COORDINATES: protein motif:HMM:NF013555.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
topoisomerase DNA-binding C4 zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018590103.1
COORDINATES: similar to AA sequence:RefSeq:WP_009460784.1
COORDINATES: similar to AA sequence:RefSeq:WP_016148650.1
COORDINATES: similar to AA sequence:RefSeq:WP_004611236.1
COORDINATES: similar to AA sequence:RefSeq:WP_004842962.1
COORDINATES: protein motif:HMM:NF025115.2
COORDINATES: protein motif:HMM:NF024076.2
COORDINATES: similar to AA sequence:RefSeq:WP_011987852.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003356313.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_011722647.1
GO:0018826 - methionine gamma-lyase activity [Evidence IEA]
GO:0009093 - cysteine catabolic process [Evidence IEA]; GO:0009087 - methionine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF015448.2
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
phenylalanine--tRNA ligase beta subunit-related protein
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: protein motif:HMM:TIGR00747.1
COORDINATES: similar to AA sequence:RefSeq:WP_009259238.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356298.1
GO:0018580 - nitronate monooxygenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012901.2
COORDINATES: similar to AA sequence:RefSeq:WP_008726615.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_016146640.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00531.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_015522656.1
COORDINATES: similar to AA sequence:RefSeq:WP_003495683.1
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: protein motif:HMM:NF013225.2
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_004034585.1
GO:0140911 - pore-forming activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015569337.1
COORDINATES: protein motif:HMM:NF021886.2
COORDINATES: similar to AA sequence:RefSeq:WP_007061159.1
GO:0004175 - endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004036194.1
COORDINATES: similar to AA sequence:RefSeq:WP_015561253.1
COORDINATES: protein motif:HMM:NF004490.0
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003516667.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007866343.1
COORDINATES: similar to AA sequence:RefSeq:WP_006444842.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035976.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006779895.1
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: similar to AA sequence:RefSeq:WP_004033468.1
COORDINATES: similar to AA sequence:RefSeq:WP_004033467.1
COORDINATES: similar to AA sequence:RefSeq:WP_007718768.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012933.2
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004036197.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0043039 - tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: protein motif:HMM:TIGR00437.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_017212075.1
GO:0004340 - glucokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037271.1
acetyl-CoA hydrolase/transferase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012160409.1
COORDINATES: similar to AA sequence:RefSeq:WP_008721092.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036420.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_004036419.1
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_009059691.1
COORDINATES: similar to AA sequence:RefSeq:WP_003019560.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004036494.1
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006444325.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037332.1
alpha/beta-type small acid-soluble spore protein
COORDINATES: similar to AA sequence:RefSeq:WP_014255289.1
COORDINATES: similar to AA sequence:RefSeq:WP_006858193.1
COORDINATES: similar to AA sequence:RefSeq:WP_014080650.1
COORDINATES: similar to AA sequence:RefSeq:WP_009220085.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004036334.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012620885.1
COORDINATES: protein motif:HMM:NF014614.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015526245.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_003019401.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_004038583.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008907851.1
GO:0003690 - double-stranded DNA binding [Evidence IEA]
small, acid-soluble spore protein, alpha/beta type
COORDINATES: similar to AA sequence:RefSeq:WP_004038579.1
COORDINATES: similar to AA sequence:RefSeq:WP_008706643.1
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013647.2
COORDINATES: similar to AA sequence:RefSeq:WP_004843754.1
COORDINATES: protein motif:HMM:NF014093.2
COORDINATES: protein motif:HMM:NF014094.2
COORDINATES: similar to AA sequence:RefSeq:WP_009893746.1
COORDINATES: similar to AA sequence:RefSeq:WP_003426762.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038561.1
COORDINATES: similar to AA sequence:RefSeq:WP_009257892.1
COORDINATES: similar to AA sequence:RefSeq:WP_019595757.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016729104.1
COORDINATES: similar to AA sequence:RefSeq:WP_004221041.1
GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012200091.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
BlaI/MecI/CopY family transcriptional regulator
COORDINATES: protein motif:HMM:NF017390.2
COORDINATES: protein motif:HMM:TIGR02669.1
COORDINATES: similar to AA sequence:RefSeq:WP_009987790.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015557496.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014355780.1
COORDINATES: protein motif:HMM:NF024587.2
COORDINATES: similar to AA sequence:RefSeq:WP_016286750.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005354558.1
COORDINATES: similar to AA sequence:RefSeq:WP_003482249.1
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: similar to AA sequence:RefSeq:WP_002576659.1
COORDINATES: similar to AA sequence:RefSeq:WP_002575511.1
COORDINATES: protein motif:HMM:NF024139.2
COORDINATES: similar to AA sequence:RefSeq:WP_003358190.1
COORDINATES: protein motif:HMM:NF022379.2
COORDINATES: similar to AA sequence:RefSeq:WP_015613935.1
COORDINATES: similar to AA sequence:RefSeq:WP_014120099.1
COORDINATES: similar to AA sequence:RefSeq:WP_002592921.1
COORDINATES: similar to AA sequence:RefSeq:WP_012100336.1
COORDINATES: similar to AA sequence:RefSeq:WP_002585325.1
COORDINATES: similar to AA sequence:RefSeq:WP_009242792.1
COORDINATES: similar to AA sequence:RefSeq:WP_018594431.1
COORDINATES: similar to AA sequence:RefSeq:WP_016298698.1
COORDINATES: similar to AA sequence:RefSeq:WP_009531008.1
PBSX family phage terminase large subunit
COORDINATES: protein motif:HMM:NF016988.2
COORDINATES: protein motif:HMM:NF017919.2
COORDINATES: protein motif:HMM:NF018515.2
GO:0019069 - viral capsid assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007704880.1
GO:0044423 - virion component [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015558746.1
COORDINATES: similar to AA sequence:RefSeq:WP_013623582.1
COORDINATES: protein motif:HMM:NF018553.2
COORDINATES: similar to AA sequence:RefSeq:WP_004605283.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF014871.2
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007788690.1
COORDINATES: similar to AA sequence:RefSeq:WP_014825362.1
COORDINATES: similar to AA sequence:RefSeq:WP_017752542.1
COORDINATES: similar to AA sequence:RefSeq:WP_015051398.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013625647.1
COORDINATES: similar to AA sequence:RefSeq:WP_018590155.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034455.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF015739.2
FtsQ-type POTRA domain-containing protein
COORDINATES: protein motif:HMM:NF017734.2
COORDINATES: similar to AA sequence:RefSeq:WP_010243134.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034452.1
COORDINATES: similar to AA sequence:RefSeq:WP_006782523.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006568081.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_006782521.1
COORDINATES: similar to AA sequence:RefSeq:WP_004841676.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_008981076.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_012200839.1
COORDINATES: similar to AA sequence:RefSeq:WP_014117237.1
COORDINATES: similar to AA sequence:RefSeq:WP_008981074.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037582.1
COORDINATES: protein motif:HMM:NF024231.2
COORDINATES: similar to AA sequence:RefSeq:WP_003692752.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007050115.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015530284.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_002592229.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003425471.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034245.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034238.1
3-methyl-2-oxobutanoate dehydrogenase subunit VorB
COORDINATES: similar to AA sequence:RefSeq:WP_003420710.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004034236.1
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: protein motif:HMM:NF017016.2
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: protein motif:HMM:NF013279.2
FtsW/RodA/SpoVE family cell cycle protein
COORDINATES: similar to AA sequence:RefSeq:WP_004038632.1
GO:0008047 - enzyme activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004038629.1
2-hydroxyacyl-CoA dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003376494.1
COORDINATES: similar to AA sequence:RefSeq:WP_013725878.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014904315.1
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_003458262.1
COORDINATES: similar to AA sequence:RefSeq:WP_006000892.1
nitrous oxide-stimulated promoter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014905319.1
COORDINATES: protein motif:HMM:NF016754.2
COORDINATES: similar to AA sequence:RefSeq:WP_004618575.1
COORDINATES: similar to AA sequence:RefSeq:WP_009888842.1
COORDINATES: similar to AA sequence:RefSeq:WP_009257803.1
COORDINATES: similar to AA sequence:RefSeq:WP_014315263.1
LysM peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013841365.1
COORDINATES: protein motif:HMM:NF022300.2
COORDINATES: similar to AA sequence:RefSeq:WP_013841367.1
COORDINATES: similar to AA sequence:RefSeq:WP_004618583.1
COORDINATES: similar to AA sequence:RefSeq:WP_013841369.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034587.1
COORDINATES: similar to AA sequence:RefSeq:WP_008981401.1
COORDINATES: protein motif:HMM:NF015898.2
COORDINATES: similar to AA sequence:RefSeq:WP_015392601.1
GO:0047150 - betaine-homocysteine S-methyltransferase activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002851781.1
COORDINATES: similar to AA sequence:RefSeq:WP_008425827.1
COORDINATES: similar to AA sequence:RefSeq:WP_017209201.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003485963.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: protein motif:HMM:TIGR00075.1
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012342565.1
hydrogenase expression/formation protein HypE
COORDINATES: similar to AA sequence:RefSeq:WP_012343783.1
COORDINATES: similar to AA sequence:RefSeq:WP_013272841.1
GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013272840.1
GO:0016151 - nickel cation binding [Evidence IEA]
nickel-dependent hydrogenase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011986117.1
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014314108.1
COORDINATES: similar to AA sequence:RefSeq:WP_020458037.1
COORDINATES: similar to AA sequence:RefSeq:WP_015553501.1
COORDINATES: similar to AA sequence:RefSeq:WP_009246128.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003520919.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013618.2
lytic transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: protein motif:HMM:NF027593.2
COORDINATES: similar to AA sequence:RefSeq:WP_013379321.1
COORDINATES: similar to AA sequence:RefSeq:WP_020074428.1
COORDINATES: similar to AA sequence:RefSeq:WP_013379311.1
COORDINATES: protein motif:HMM:NF013105.2
COORDINATES: protein motif:HMM:NF012307.2
COORDINATES: similar to AA sequence:RefSeq:WP_016282412.1
COORDINATES: similar to AA sequence:RefSeq:WP_004033764.1
COORDINATES: similar to AA sequence:RefSeq:WP_011461101.1
COORDINATES: similar to AA sequence:RefSeq:WP_008980337.1
(deoxy)nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: similar to AA sequence:RefSeq:WP_016280542.1
COORDINATES: protein motif:HMM:TIGR00608.1
COORDINATES: similar to AA sequence:RefSeq:WP_010965947.1
COORDINATES: similar to AA sequence:RefSeq:WP_018596307.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF013621.2
COORDINATES: similar to AA sequence:RefSeq:WP_005950756.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034111.1
COORDINATES: similar to AA sequence:RefSeq:WP_004841411.1
COORDINATES: similar to AA sequence:RefSeq:WP_004845342.1
COORDINATES: protein motif:HMM:NF022188.2
Rossmann-like and DUF2520 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011721175.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010966198.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010233549.1
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: similar to AA sequence:RefSeq:WP_013658210.1
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035310.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035312.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004035314.1
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004035318.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014312018.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064622.1
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: similar to AA sequence:RefSeq:WP_015553024.1
COORDINATES: similar to AA sequence:RefSeq:WP_015513179.1
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: similar to AA sequence:RefSeq:WP_010299102.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00545.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025885.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: similar to AA sequence:RefSeq:WP_015360121.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015360122.1
COORDINATES: similar to AA sequence:RefSeq:WP_012343666.1
COORDINATES: similar to AA sequence:RefSeq:WP_009244989.1
COORDINATES: similar to AA sequence:RefSeq:WP_008976435.1
GO:0008675 - 2-dehydro-3-deoxy-phosphogluconate aldolase activity [Evidence IEA]; GO:0008700 - 4-hydroxy-2-oxoglutarate aldolase activity [Evidence IEA]
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]; GO:0009084 - glutamine family amino acid biosynthetic process [Evidence IEA]
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_008976434.1
COORDINATES: similar to AA sequence:RefSeq:WP_007064979.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008724340.1
COORDINATES: similar to AA sequence:RefSeq:WP_009060157.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073548.1
COORDINATES: protein motif:HMM:NF024989.2
zinc-binding alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006566647.1
COORDINATES: similar to AA sequence:RefSeq:WP_009062821.1
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF013539.2
COORDINATES: protein motif:HMM:NF012742.2
COORDINATES: similar to AA sequence:RefSeq:WP_005945225.1
sugar ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: similar to AA sequence:RefSeq:WP_005945234.1
COORDINATES: protein motif:HMM:NF002872.1
COORDINATES: similar to AA sequence:RefSeq:WP_015565939.1
class II D-tagatose-bisphosphate aldolase, non-catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009588284.1
COORDINATES: protein motif:HMM:NF024141.2
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: similar to AA sequence:RefSeq:WP_009888452.1
COORDINATES: similar to AA sequence:RefSeq:WP_018213999.1
COORDINATES: similar to AA sequence:RefSeq:WP_015944617.1
COORDINATES: similar to AA sequence:RefSeq:WP_009002642.1
COORDINATES: similar to AA sequence:RefSeq:WP_003543367.1
COORDINATES: similar to AA sequence:RefSeq:WP_016207054.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002587964.1
COORDINATES: similar to AA sequence:RefSeq:WP_002587963.1
COORDINATES: similar to AA sequence:RefSeq:WP_019662342.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005352068.1
COORDINATES: similar to AA sequence:RefSeq:WP_015567731.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019678526.1
COORDINATES: similar to AA sequence:RefSeq:WP_009063595.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0043768 - S-ribosylhomocysteine lyase activity [Evidence IEA]
GO:0009372 - quorum sensing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019678527.1
COORDINATES: similar to AA sequence:RefSeq:WP_011987678.1
COORDINATES: similar to AA sequence:RefSeq:WP_015554102.1
COORDINATES: similar to AA sequence:RefSeq:WP_017752172.1
COORDINATES: similar to AA sequence:RefSeq:WP_006717070.1
COORDINATES: similar to AA sequence:RefSeq:WP_003415498.1
COORDINATES: similar to AA sequence:RefSeq:WP_014255832.1
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009982770.1
COORDINATES: similar to AA sequence:RefSeq:WP_004620893.1
COORDINATES: similar to AA sequence:RefSeq:WP_014255829.1
COORDINATES: similar to AA sequence:RefSeq:WP_003514440.1
COORDINATES: similar to AA sequence:RefSeq:WP_014255833.1
COORDINATES: similar to AA sequence:RefSeq:WP_015565253.1
COORDINATES: similar to AA sequence:RefSeq:WP_005936447.1
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: similar to AA sequence:RefSeq:WP_009256717.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006428991.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_005940279.1
COORDINATES: similar to AA sequence:RefSeq:WP_015564046.1
COORDINATES: similar to AA sequence:RefSeq:WP_003019653.1
COORDINATES: protein motif:HMM:NF015384.2
COORDINATES: similar to AA sequence:RefSeq:WP_003540056.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
RNA polymerase sporulation sigma factor SigE
COORDINATES: similar to AA sequence:RefSeq:WP_013625193.1
exosporium glycoprotein BclB-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_015943143.1
COORDINATES: protein motif:HMM:NF012385.2
COORDINATES: similar to AA sequence:RefSeq:WP_016320531.1
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012620615.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: protein motif:HMM:NF012424.2
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012344568.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009249630.1
COORDINATES: similar to AA sequence:RefSeq:WP_006441642.1
COORDINATES: similar to AA sequence:RefSeq:WP_005333063.1
COORDINATES: similar to AA sequence:RefSeq:WP_015522474.1
COORDINATES: similar to AA sequence:RefSeq:WP_018591703.1
COORDINATES: similar to AA sequence:RefSeq:WP_003369845.1
amino acid adenylation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009172755.1
COORDINATES: protein motif:HMM:NF015049.2
COORDINATES: similar to AA sequence:RefSeq:WP_013271939.1
COORDINATES: similar to AA sequence:RefSeq:WP_002600417.1
COORDINATES: similar to AA sequence:RefSeq:WP_002591559.1
COORDINATES: protein motif:HMM:NF012354.2
COORDINATES: similar to AA sequence:RefSeq:WP_004614869.1
GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006066 - alcohol metabolic process [Evidence IEA]; GO:0015976 - carbon utilization [Evidence IEA]
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_004038505.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015360039.1
COORDINATES: similar to AA sequence:RefSeq:WP_006772927.1
COORDINATES: protein motif:HMM:NF023586.2
COORDINATES: protein motif:HMM:NF025155.2
COORDINATES: similar to AA sequence:RefSeq:WP_004036437.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036435.1
COORDINATES: similar to AA sequence:RefSeq:WP_003451074.1
COORDINATES: similar to AA sequence:RefSeq:WP_013272278.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003460085.1
COORDINATES: protein motif:HMM:NF023043.2
COORDINATES: similar to AA sequence:RefSeq:WP_004067828.1
COORDINATES: similar to AA sequence:RefSeq:WP_009320755.1
COORDINATES: similar to AA sequence:RefSeq:WP_004614365.1
COORDINATES: protein motif:HMM:NF025655.2
TFIIB-type zinc ribbon-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014312207.1
COORDINATES: similar to AA sequence:RefSeq:WP_005950546.1
COORDINATES: similar to AA sequence:RefSeq:WP_013655999.1
COORDINATES: protein motif:HMM:TIGR01538.1
GO:0046798 - viral portal complex [Evidence IEA]
GO:0051027 - DNA transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016148.2
COORDINATES: protein motif:HMM:NF025623.2
COORDINATES: protein motif:HMM:NF016990.2
COORDINATES: similar to AA sequence:RefSeq:WP_009324422.1
COORDINATES: similar to AA sequence:RefSeq:WP_004620700.1
COORDINATES: protein motif:HMM:TIGR01760.1
GO:0016032 - viral process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006862344.1
COORDINATES: protein motif:HMM:TIGR01665.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656697.1
COORDINATES: protein motif:HMM:NF016763.2
COORDINATES: protein motif:HMM:NF025702.2
COORDINATES: similar to AA sequence:RefSeq:WP_012102957.1
COORDINATES: similar to AA sequence:RefSeq:WP_003483104.1
COORDINATES: similar to AA sequence:RefSeq:WP_003494611.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073806.1
COORDINATES: similar to AA sequence:RefSeq:WP_009298898.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_003454432.1
COORDINATES: similar to AA sequence:RefSeq:WP_004033475.1
COORDINATES: similar to AA sequence:RefSeq:WP_002573598.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013382475.1
COORDINATES: similar to AA sequence:RefSeq:WP_012199790.1
COORDINATES: similar to AA sequence:RefSeq:WP_002601388.1
COORDINATES: similar to AA sequence:RefSeq:WP_006863776.1
COORDINATES: protein motif:HMM:NF015081.2
COORDINATES: similar to AA sequence:RefSeq:WP_007782826.1
COORDINATES: similar to AA sequence:RefSeq:WP_006444347.1
COORDINATES: similar to AA sequence:RefSeq:WP_012102880.1
Vat family streptogramin A O-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004036091.1
COORDINATES: similar to AA sequence:RefSeq:WP_014254064.1
COORDINATES: similar to AA sequence:RefSeq:WP_006718376.1
COORDINATES: similar to AA sequence:RefSeq:WP_003485363.1
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: similar to AA sequence:RefSeq:WP_009888775.1
COORDINATES: similar to AA sequence:RefSeq:WP_006355303.1
COORDINATES: similar to AA sequence:RefSeq:WP_015944022.1
COORDINATES: similar to AA sequence:RefSeq:WP_007785169.1
COORDINATES: similar to AA sequence:RefSeq:WP_015944028.1
COORDINATES: similar to AA sequence:RefSeq:WP_013274099.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357362.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357361.1
COORDINATES: similar to AA sequence:RefSeq:WP_009061102.1
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_004853366.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
VanR-ABDEGLN family response regulator transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_021418927.1
COORDINATES: similar to AA sequence:RefSeq:WP_002594772.1
COORDINATES: similar to AA sequence:RefSeq:WP_003360321.1
COORDINATES: similar to AA sequence:RefSeq:WP_003434342.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009213585.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: similar to AA sequence:RefSeq:WP_012199567.1
COORDINATES: similar to AA sequence:RefSeq:WP_005338290.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_004606623.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_002590139.1
COORDINATES: similar to AA sequence:RefSeq:WP_014827506.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073664.1
COORDINATES: similar to AA sequence:RefSeq:WP_010250432.1
COORDINATES: protein motif:HMM:NF024122.2
COORDINATES: similar to AA sequence:RefSeq:WP_008395072.1
COORDINATES: similar to AA sequence:RefSeq:WP_002571963.1
GO:0004333 - fumarate hydratase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008705797.1
COORDINATES: protein motif:HMM:NF001095.0
COORDINATES: similar to AA sequence:RefSeq:WP_007286625.1
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: similar to AA sequence:RefSeq:WP_006876965.1
COORDINATES: similar to AA sequence:RefSeq:WP_008392391.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014119578.1
COORDINATES: similar to AA sequence:RefSeq:WP_014119579.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009065568.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013239552.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011877156.1
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
bifunctional chorismate mutase/prephenate dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_013280240.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004845772.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012634919.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_003427011.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036450.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036451.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:TIGR01143.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_008724821.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: similar to AA sequence:RefSeq:WP_015516712.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: protein motif:HMM:TIGR02614.1
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013731.2
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003504275.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004033752.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657966.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034173.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034172.1
GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004034170.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008517796.1
COORDINATES: similar to AA sequence:RefSeq:WP_003513013.1
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_013273134.1
COORDINATES: protein motif:HMM:NF016526.2
accessory gene regulator B family protein
COORDINATES: protein motif:HMM:NF024140.2
COORDINATES: similar to AA sequence:RefSeq:WP_014116627.1
COORDINATES: similar to AA sequence:RefSeq:WP_009066205.1
COORDINATES: protein motif:HMM:NF017347.2
COORDINATES: similar to AA sequence:RefSeq:WP_017413275.1
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018589368.1
COORDINATES: similar to AA sequence:RefSeq:WP_009004968.1
COORDINATES: similar to AA sequence:RefSeq:WP_014520971.1
COORDINATES: similar to AA sequence:RefSeq:WP_007062806.1
COORDINATES: similar to AA sequence:RefSeq:WP_012450251.1
COORDINATES: similar to AA sequence:RefSeq:WP_005811990.1
COORDINATES: similar to AA sequence:RefSeq:WP_012199580.1
COORDINATES: similar to AA sequence:RefSeq:WP_004603624.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017894602.1
COORDINATES: similar to AA sequence:RefSeq:WP_009254537.1
COORDINATES: similar to AA sequence:RefSeq:WP_013977850.1
COORDINATES: similar to AA sequence:RefSeq:WP_006567611.1
COORDINATES: protein motif:HMM:NF039905.1
COORDINATES: protein motif:HMM:NF027567.2
COORDINATES: similar to AA sequence:RefSeq:WP_003493044.1
four-helix bundle copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003509323.1
COORDINATES: similar to AA sequence:RefSeq:WP_005999968.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322894.1
COORDINATES: similar to AA sequence:RefSeq:WP_002586694.1
COORDINATES: similar to AA sequence:RefSeq:WP_015526142.1
COORDINATES: similar to AA sequence:RefSeq:WP_014354839.1
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: protein motif:HMM:NF014602.2
COORDINATES: similar to AA sequence:RefSeq:WP_004036541.1
COORDINATES: similar to AA sequence:RefSeq:WP_018596890.1
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015756964.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004036546.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036428.1
COORDINATES: similar to AA sequence:RefSeq:WP_009321863.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034200.1
COORDINATES: similar to AA sequence:RefSeq:WP_003445901.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073036.1
COORDINATES: similar to AA sequence:RefSeq:WP_009889078.1
COORDINATES: similar to AA sequence:RefSeq:WP_010250716.1
COORDINATES: similar to AA sequence:RefSeq:WP_012451642.1
COORDINATES: similar to AA sequence:RefSeq:WP_010250718.1
COORDINATES: similar to AA sequence:RefSeq:WP_010250719.1
COORDINATES: similar to AA sequence:RefSeq:WP_014119680.1
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008979931.1
COORDINATES: similar to AA sequence:RefSeq:WP_003530179.1
prolyl-tRNA synthetase associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009757045.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: protein motif:HMM:NF017902.2
COORDINATES: similar to AA sequence:RefSeq:WP_004034690.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00585.2
COORDINATES: similar to AA sequence:RefSeq:WP_004034687.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:NF012970.2
COORDINATES: similar to AA sequence:RefSeq:WP_004033898.1
COORDINATES: similar to AA sequence:RefSeq:WP_004612570.1
COORDINATES: protein motif:HMM:NF036789.2
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: similar to AA sequence:RefSeq:WP_009248497.1
COORDINATES: protein motif:HMM:NF014012.2
COORDINATES: similar to AA sequence:RefSeq:WP_006779262.1
GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
monovalent cation/H+ antiporter complex subunit F
COORDINATES: similar to AA sequence:RefSeq:WP_004036404.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_004036406.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036407.1
COORDINATES: similar to AA sequence:RefSeq:WP_008720971.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036409.1
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016297889.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036411.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293226.1
COORDINATES: protein motif:HMM:NF014477.2
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_017213140.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273281.1
COORDINATES: similar to AA sequence:RefSeq:WP_010294603.1
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009061489.1
COORDINATES: protein motif:HMM:NF025121.2
COORDINATES: similar to AA sequence:RefSeq:WP_010297431.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036032.1
COORDINATES: similar to AA sequence:RefSeq:WP_013484773.1
COORDINATES: protein motif:HMM:NF012257.2
cyclic nucleotide-binding domain-containing protein
COORDINATES: protein motif:HMM:NF016535.2
COORDINATES: protein motif:HMM:NF018601.2
COORDINATES: similar to AA sequence:RefSeq:WP_013485184.1
COORDINATES: similar to AA sequence:RefSeq:WP_015534854.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_004074677.1
COORDINATES: similar to AA sequence:RefSeq:WP_009167461.1
COORDINATES: protein motif:HMM:NF022633.2
COORDINATES: protein motif:HMM:NF024685.2
COORDINATES: similar to AA sequence:RefSeq:WP_012704184.1
COORDINATES: similar to AA sequence:RefSeq:WP_001129326.1
COORDINATES: similar to AA sequence:RefSeq:WP_016922542.1
COORDINATES: similar to AA sequence:RefSeq:WP_002598291.1
COORDINATES: similar to AA sequence:RefSeq:WP_007060349.1
COORDINATES: similar to AA sequence:RefSeq:WP_006906986.1
toll/interleukin-1 receptor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018211942.1
COORDINATES: protein motif:HMM:NF025561.2
COORDINATES: similar to AA sequence:RefSeq:WP_006861262.1
COORDINATES: similar to AA sequence:RefSeq:WP_002566185.1
COORDINATES: similar to AA sequence:RefSeq:WP_016289583.1
COORDINATES: similar to AA sequence:RefSeq:WP_015558244.1
COORDINATES: similar to AA sequence:RefSeq:WP_019541685.1
COORDINATES: similar to AA sequence:RefSeq:WP_009260867.1
COORDINATES: similar to AA sequence:RefSeq:WP_011837818.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015565924.1
COORDINATES: similar to AA sequence:RefSeq:WP_006427512.1
COORDINATES: similar to AA sequence:RefSeq:WP_008116612.1
COORDINATES: similar to AA sequence:RefSeq:WP_004614338.1
COORDINATES: similar to AA sequence:RefSeq:WP_003515855.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018596706.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657987.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034059.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02832.1
COORDINATES: protein motif:HMM:TIGR02074.1
COORDINATES: similar to AA sequence:RefSeq:WP_006566962.1
COORDINATES: similar to AA sequence:RefSeq:WP_005603830.1
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF025386.2
COORDINATES: protein motif:HMM:NF027788.2
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01987.1
nucleotidyltransferase substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006780482.1
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015513017.1
COORDINATES: similar to AA sequence:RefSeq:WP_002589179.1
COORDINATES: similar to AA sequence:RefSeq:WP_004068302.1
COORDINATES: similar to AA sequence:RefSeq:WP_009527716.1
COORDINATES: similar to AA sequence:RefSeq:WP_015573923.1
COORDINATES: similar to AA sequence:RefSeq:WP_004840209.1
phage terminase large subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002565372.1
COORDINATES: similar to AA sequence:RefSeq:WP_008750155.1
COORDINATES: similar to AA sequence:RefSeq:WP_004840212.1
COORDINATES: similar to AA sequence:RefSeq:WP_006862321.1
Mu-like prophage major head subunit gpT family protein
COORDINATES: protein motif:HMM:NF021473.2
COORDINATES: protein motif:HMM:NF018472.2
COORDINATES: similar to AA sequence:RefSeq:WP_008396664.1
COORDINATES: protein motif:HMM:NF016846.2
COORDINATES: similar to AA sequence:RefSeq:WP_005940842.1
COORDINATES: protein motif:HMM:NF018674.2
COORDINATES: similar to AA sequence:RefSeq:WP_005940852.1
COORDINATES: protein motif:HMM:NF016736.2
COORDINATES: protein motif:HMM:NF021220.2
COORDINATES: protein motif:HMM:NF023985.2
COORDINATES: similar to AA sequence:RefSeq:WP_005937338.1
COORDINATES: similar to AA sequence:RefSeq:WP_009529285.1
COORDINATES: similar to AA sequence:RefSeq:WP_015616437.1
COORDINATES: protein motif:HMM:NF024977.2
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: similar to AA sequence:RefSeq:WP_006776315.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063020.1
COORDINATES: protein motif:HMM:NF015461.2
GO:0005576 - extracellular region [Evidence IEA]
COORDINATES: protein motif:HMM:NF025454.2
COORDINATES: similar to AA sequence:RefSeq:WP_015523689.1
COORDINATES: similar to AA sequence:RefSeq:WP_014313906.1
COORDINATES: similar to AA sequence:RefSeq:WP_016321072.1
COORDINATES: protein motif:HMM:NF013672.2
COORDINATES: similar to AA sequence:RefSeq:WP_009324978.1
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: protein motif:HMM:NF024081.2
COORDINATES: similar to AA sequence:RefSeq:WP_003448231.1
COORDINATES: protein motif:HMM:NF015436.2
COORDINATES: similar to AA sequence:RefSeq:WP_004222029.1
COORDINATES: similar to AA sequence:RefSeq:WP_016440930.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_012742382.1
GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF015649.2
BTAD domain-containing putative transcriptional regulator
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: similar to AA sequence:RefSeq:WP_009172328.1
COORDINATES: similar to AA sequence:RefSeq:WP_003511951.1
COORDINATES: similar to AA sequence:RefSeq:WP_015613566.1
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_008980069.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002592600.1
COORDINATES: protein motif:HMM:NF024800.2
COORDINATES: similar to AA sequence:RefSeq:WP_009062592.1
COORDINATES: similar to AA sequence:RefSeq:WP_017414218.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358404.1
[FeFe] hydrogenase H-cluster maturation GTPase HydF
COORDINATES: similar to AA sequence:RefSeq:WP_015567344.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
[FeFe] hydrogenase H-cluster radical SAM maturase HydG
COORDINATES: similar to AA sequence:RefSeq:WP_015358402.1
[FeFe] hydrogenase H-cluster radical SAM maturase HydE
COORDINATES: similar to AA sequence:RefSeq:WP_006355635.1
COORDINATES: similar to AA sequence:RefSeq:WP_002586417.1
COORDINATES: similar to AA sequence:RefSeq:WP_005423211.1
COORDINATES: protein motif:HMM:TIGR03733.1
lantibiotic immunity ABC transporter MutG family permease subunit
COORDINATES: protein motif:HMM:TIGR03732.1
lantibiotic immunity ABC transporter MutE/EpiE family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_016321391.1
lantibiotic protection ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004036486.1
COORDINATES: similar to AA sequence:RefSeq:WP_015526621.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036483.1
COORDINATES: protein motif:HMM:NF015515.2
COORDINATES: similar to AA sequence:RefSeq:WP_017210362.1
COORDINATES: protein motif:HMM:NF018626.2
COORDINATES: similar to AA sequence:RefSeq:WP_006781619.1
COORDINATES: similar to AA sequence:RefSeq:WP_005541856.1
COORDINATES: similar to AA sequence:RefSeq:WP_002586949.1
COORDINATES: similar to AA sequence:RefSeq:WP_006568796.1
COORDINATES: similar to AA sequence:RefSeq:WP_006353430.1
GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0046914 - transition metal ion binding [Evidence IEA]
iron dependent repressor, metal binding and dimerization domain protein
COORDINATES: similar to AA sequence:RefSeq:WP_014119443.1
COORDINATES: similar to AA sequence:RefSeq:WP_014117367.1
COORDINATES: protein motif:HMM:NF014675.2
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: similar to AA sequence:RefSeq:WP_014184996.1
COORDINATES: similar to AA sequence:RefSeq:WP_013119367.1
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: similar to AA sequence:RefSeq:WP_015392454.1
COORDINATES: similar to AA sequence:RefSeq:WP_009898047.1
COORDINATES: similar to AA sequence:RefSeq:WP_003426740.1
COORDINATES: similar to AA sequence:RefSeq:WP_011722820.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008755060.1
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_003477233.1
COORDINATES: similar to AA sequence:RefSeq:WP_016286429.1
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008372628.1
COORDINATES: similar to AA sequence:RefSeq:WP_005351912.1
COORDINATES: similar to AA sequence:RefSeq:WP_006906663.1
COORDINATES: similar to AA sequence:RefSeq:WP_004063792.1
COORDINATES: protein motif:HMM:NF013694.2
COORDINATES: similar to AA sequence:RefSeq:WP_009243847.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00558
ribosomal protein L20 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_006780218.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034491.1
COORDINATES: similar to AA sequence:RefSeq:WP_004846381.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037572.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_013271693.1
COORDINATES: similar to AA sequence:RefSeq:WP_005949461.1
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: similar to AA sequence:RefSeq:WP_007868565.1
COORDINATES: similar to AA sequence:RefSeq:WP_013624442.1
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:NF024947.2
SbcC/MukB-like Walker B domain-containing protein
COORDINATES: protein motif:HMM:NF006162.0
COORDINATES: similar to AA sequence:RefSeq:WP_009246363.1
COORDINATES: similar to AA sequence:RefSeq:WP_008401087.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_004618366.1
GO:0008899 - homoserine O-succinyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018595867.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_012739578.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038489.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004038487.1
COORDINATES: similar to AA sequence:RefSeq:WP_009250580.1
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004844564.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015013.2
COORDINATES: protein motif:HMM:NF020337.2
COORDINATES: similar to AA sequence:RefSeq:WP_003501885.1
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013656669.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009290995.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012103887.1
COORDINATES: similar to AA sequence:RefSeq:WP_007713173.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004034424.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656163.1
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004034681.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014725.2
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012994015.1
COORDINATES: similar to AA sequence:RefSeq:WP_006876641.1
COORDINATES: similar to AA sequence:RefSeq:WP_002576809.1
COORDINATES: similar to AA sequence:RefSeq:WP_006570645.1
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: similar to AA sequence:RefSeq:WP_020815327.1
COORDINATES: similar to AA sequence:RefSeq:WP_002609625.1
COORDINATES: protein motif:HMM:NF019966.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_004034671.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015617128.1
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: similar to AA sequence:RefSeq:WP_013362257.1
COORDINATES: protein motif:HMM:NF020450.2
COORDINATES: similar to AA sequence:RefSeq:WP_004033531.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003515550.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: similar to AA sequence:RefSeq:WP_004033521.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070402 - NADPH binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_008908759.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012742612.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012739092.1
GO:0033862 - UMP kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012200692.1
COORDINATES: similar to AA sequence:RefSeq:WP_009299114.1
COORDINATES: similar to AA sequence:RefSeq:WP_005331658.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004033499.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_013658243.1
COORDINATES: similar to AA sequence:RefSeq:WP_009168542.1
COORDINATES: similar to AA sequence:RefSeq:WP_014117095.1
COORDINATES: similar to AA sequence:RefSeq:WP_009065712.1
COORDINATES: similar to AA sequence:RefSeq:WP_018598290.1
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006444412.1
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008399838.1
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018596583.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018593049.1
COORDINATES: similar to AA sequence:RefSeq:WP_015534081.1
COORDINATES: similar to AA sequence:RefSeq:WP_020493211.1
indolepyruvate oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012157934.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004034105.1
COORDINATES: similar to AA sequence:RefSeq:WP_015526221.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019678765.1
COORDINATES: similar to AA sequence:RefSeq:WP_013498801.1
GO:0016829 - lyase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013498800.1
COORDINATES: similar to AA sequence:RefSeq:WP_007861098.1
COORDINATES: similar to AA sequence:RefSeq:WP_020815326.1
COORDINATES: similar to AA sequence:RefSeq:WP_014262336.1
COORDINATES: similar to AA sequence:RefSeq:WP_006520651.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015395111.1
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014185026.1
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_006774513.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971501.1
COORDINATES: protein motif:HMM:NF027890.2
TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010299107.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
GO:0098869 - cellular oxidant detoxification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008716604.1
COORDINATES: similar to AA sequence:RefSeq:WP_003356768.1
COORDINATES: similar to AA sequence:RefSeq:WP_008418371.1
COORDINATES: similar to AA sequence:RefSeq:WP_015391163.1
COORDINATES: similar to AA sequence:RefSeq:WP_011098978.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158046.1
COORDINATES: similar to AA sequence:RefSeq:WP_003502770.1
acyl CoA:acetate/3-ketoacid CoA transferase
COORDINATES: similar to AA sequence:RefSeq:WP_012158052.1
COORDINATES: similar to AA sequence:RefSeq:WP_012198634.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004616237.1
COORDINATES: similar to AA sequence:RefSeq:WP_016323401.1
COORDINATES: similar to AA sequence:RefSeq:WP_007286700.1
COORDINATES: similar to AA sequence:RefSeq:WP_013272230.1
COORDINATES: similar to AA sequence:RefSeq:WP_012102393.1
aspartate/glutamate racemase family protein
COORDINATES: protein motif:HMM:NF012904.2
COORDINATES: similar to AA sequence:RefSeq:WP_017751608.1
COORDINATES: similar to AA sequence:RefSeq:WP_013624305.1
COORDINATES: similar to AA sequence:RefSeq:WP_005946441.1
COORDINATES: similar to AA sequence:RefSeq:WP_016149251.1
COORDINATES: protein motif:HMM:NF037979.1
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: similar to AA sequence:RefSeq:WP_009289883.1
COORDINATES: similar to AA sequence:RefSeq:WP_013485398.1
COORDINATES: similar to AA sequence:RefSeq:WP_007783928.1
COORDINATES: similar to AA sequence:RefSeq:WP_007783926.1
COORDINATES: similar to AA sequence:RefSeq:WP_009059776.1
COORDINATES: similar to AA sequence:RefSeq:WP_005952292.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273564.1
COORDINATES: similar to AA sequence:RefSeq:WP_009255936.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273566.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273567.1
COORDINATES: similar to AA sequence:RefSeq:WP_004442492.1
COORDINATES: similar to AA sequence:RefSeq:WP_020073119.1
COORDINATES: similar to AA sequence:RefSeq:WP_009066196.1
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014117652.1
GlsB/YeaQ/YmgE family stress response membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_005816017.1
COORDINATES: similar to AA sequence:RefSeq:WP_003427477.1
COORDINATES: protein motif:HMM:NF023178.2
COORDINATES: protein motif:HMM:NF027589.2
COORDINATES: protein motif:HMM:NF027725.2
COORDINATES: protein motif:HMM:NF012956.2
cadherin-like beta sandwich domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014312375.1
COORDINATES: similar to AA sequence:RefSeq:WP_013658017.1
COORDINATES: similar to AA sequence:RefSeq:WP_007060434.1
COORDINATES: similar to AA sequence:RefSeq:WP_006782420.1
COORDINATES: similar to AA sequence:RefSeq:WP_002577601.1
COORDINATES: similar to AA sequence:RefSeq:WP_015394465.1
COORDINATES: similar to AA sequence:RefSeq:WP_009298207.1
COORDINATES: similar to AA sequence:RefSeq:WP_002573825.1
COORDINATES: similar to AA sequence:RefSeq:WP_009061492.1
COORDINATES: similar to AA sequence:RefSeq:WP_015759621.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_020072878.1
COORDINATES: similar to AA sequence:RefSeq:WP_018213996.1
COORDINATES: similar to AA sequence:RefSeq:WP_018213997.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018213998.1
COORDINATES: similar to AA sequence:RefSeq:WP_012199121.1
COORDINATES: similar to AA sequence:RefSeq:WP_003451687.1
COORDINATES: similar to AA sequence:RefSeq:WP_002579228.1
COORDINATES: similar to AA sequence:RefSeq:WP_013271858.1
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014116765.1
COORDINATES: similar to AA sequence:RefSeq:WP_004618127.1
COORDINATES: similar to AA sequence:RefSeq:WP_014793472.1
COORDINATES: similar to AA sequence:RefSeq:WP_004618124.1
COORDINATES: similar to AA sequence:RefSeq:WP_004622201.1
COORDINATES: similar to AA sequence:RefSeq:WP_011967885.1
COORDINATES: similar to AA sequence:RefSeq:WP_009643419.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011971733.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013657510.1
COORDINATES: similar to AA sequence:RefSeq:WP_006000784.1
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: similar to AA sequence:RefSeq:WP_005998946.1
GO:0015498 - pantothenate:sodium symporter activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015887 - pantothenate transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF017958.2
COORDINATES: protein motif:HMM:TIGR00745.1
COORDINATES: similar to AA sequence:RefSeq:WP_005951263.1
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_014116485.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273345.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273346.1
COORDINATES: protein motif:HMM:NF015407.2
COORDINATES: similar to AA sequence:RefSeq:WP_013274097.1
COORDINATES: protein motif:HMM:NF021378.2
COORDINATES: similar to AA sequence:RefSeq:WP_013274102.1
COORDINATES: similar to AA sequence:RefSeq:WP_004617732.1
COORDINATES: similar to AA sequence:RefSeq:WP_011860908.1
COORDINATES: similar to AA sequence:RefSeq:WP_004617728.1
COORDINATES: similar to AA sequence:RefSeq:WP_004617726.1
COORDINATES: protein motif:HMM:NF025611.2
COORDINATES: similar to AA sequence:RefSeq:WP_076612034.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006568603.1
[Fe-Fe] hydrogenase large subunit C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009986630.1
COORDINATES: protein motif:HMM:NF018884.2
PP2C family protein-serine/threonine phosphatase
COORDINATES: protein motif:HMM:NF013703.2
COORDINATES: protein motif:HMM:NF021445.2
phosphatidylglycerol lysyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF012760.2
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019160783.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357756.1
GO:0015440 - ABC-type peptide transporter activity [Evidence IEA]
GO:0043213 - bacteriocin transport [Evidence IEA]
NHLP bacteriocin export ABC transporter permease/ATPase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006874197.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
NHLP family bacteriocin export ABC transporter peptidase/permease/ATPase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013274091.1
COORDINATES: similar to AA sequence:RefSeq:WP_010073495.1
COORDINATES: similar to AA sequence:RefSeq:WP_010073498.1
COORDINATES: similar to AA sequence:RefSeq:WP_003496277.1
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: similar to AA sequence:RefSeq:WP_013361046.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016625 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor [Evidence IEA]
aldehyde ferredoxin oxidoreductase C-terminal domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF01055
molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_011010757.1
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_015614329.1
COORDINATES: similar to AA sequence:RefSeq:WP_013174755.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: similar to AA sequence:RefSeq:WP_015043693.1
COORDINATES: similar to AA sequence:RefSeq:WP_013379736.1
GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015418.2
energy-coupling factor ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012160060.1
COORDINATES: similar to AA sequence:RefSeq:WP_007062348.1
COORDINATES: similar to AA sequence:RefSeq:WP_003358476.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF00380
The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF024810.2
COORDINATES: similar to AA sequence:RefSeq:WP_006863919.1
COORDINATES: similar to AA sequence:RefSeq:WP_006353133.1
catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024144.2
COORDINATES: protein motif:HMM:NF017183.2
COORDINATES: similar to AA sequence:RefSeq:WP_013655691.1
reverse transcriptase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008423871.1
COORDINATES: similar to AA sequence:RefSeq:WP_003512338.1
COORDINATES: similar to AA sequence:RefSeq:WP_000567888.1
COORDINATES: similar to AA sequence:RefSeq:WP_015261898.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020073235.1
COORDINATES: similar to AA sequence:RefSeq:WP_009323467.1
COORDINATES: similar to AA sequence:RefSeq:WP_009614650.1
COORDINATES: similar to AA sequence:RefSeq:WP_019226719.1
COORDINATES: similar to AA sequence:RefSeq:WP_011460558.1
COORDINATES: similar to AA sequence:RefSeq:WP_011988915.1
COORDINATES: similar to AA sequence:RefSeq:WP_015513901.1
COORDINATES: similar to AA sequence:RefSeq:WP_005811877.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_009259407.1
COORDINATES: similar to AA sequence:RefSeq:WP_014313429.1
COORDINATES: similar to AA sequence:RefSeq:WP_019190437.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244532.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244526.1
COORDINATES: similar to AA sequence:RefSeq:WP_003514283.1
COORDINATES: similar to AA sequence:RefSeq:WP_014116778.1
COORDINATES: similar to AA sequence:RefSeq:WP_007715526.1
COORDINATES: similar to AA sequence:RefSeq:WP_006428069.1
COORDINATES: similar to AA sequence:RefSeq:WP_014262329.1
COORDINATES: similar to AA sequence:RefSeq:WP_009213826.1
COORDINATES: similar to AA sequence:RefSeq:WP_005350766.1
COORDINATES: similar to AA sequence:RefSeq:WP_018590219.1
COORDINATES: protein motif:HMM:NF025448.2
COORDINATES: similar to AA sequence:RefSeq:WP_015925615.1
COORDINATES: protein motif:HMM:NF014036.2
COORDINATES: protein motif:HMM:TIGR01893.1
COORDINATES: similar to AA sequence:RefSeq:WP_010293944.1
COORDINATES: protein motif:HMM:NF005591.0
GO:0016805 - dipeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003465191.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360889.1
COORDINATES: protein motif:HMM:NF012870.2
GO:0015074 - DNA integration [Evidence IEA]
DDE-type integrase/transposase/recombinase
COORDINATES: protein motif:HMM:NF009668.0
COORDINATES: protein motif:HMM:NF024673.2
COORDINATES: similar to AA sequence:RefSeq:WP_003512622.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_004075293.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_019849869.1
SEC-C metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011987735.1
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: protein motif:HMM:NF016232.2
COORDINATES: similar to AA sequence:RefSeq:WP_005815161.1
COORDINATES: similar to AA sequence:RefSeq:WP_002587180.1
recombinase zinc beta ribbon domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611172.1
COORDINATES: protein motif:HMM:NF025056.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000121211.1
COORDINATES: similar to AA sequence:RefSeq:WP_002567219.1
COORDINATES: similar to AA sequence:RefSeq:WP_015045052.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015045051.1
COORDINATES: similar to AA sequence:RefSeq:WP_015045050.1
COORDINATES: similar to AA sequence:RefSeq:WP_015045047.1
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_018593300.1
COORDINATES: similar to AA sequence:RefSeq:WP_006573235.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016295439.1
plasmid mobilization relaxosome protein MobC
COORDINATES: protein motif:HMM:NF012493.2
COORDINATES: similar to AA sequence:RefSeq:WP_006771478.1
COORDINATES: similar to AA sequence:RefSeq:WP_008791954.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF037422.2
COORDINATES: similar to AA sequence:RefSeq:WP_016227182.1
GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0042173 - regulation of sporulation resulting in formation of a cellular spore [Evidence IEA]
sporulation initiation factor Spo0A C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009534416.1
COORDINATES: similar to AA sequence:RefSeq:WP_004053772.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF025558.2
COORDINATES: similar to AA sequence:RefSeq:WP_002569206.1
COORDINATES: protein motif:HMM:NF025641.2
COORDINATES: protein motif:HMM:NF025556.2
COORDINATES: similar to AA sequence:RefSeq:WP_002571589.1
COORDINATES: similar to AA sequence:RefSeq:WP_009322012.1
COORDINATES: similar to AA sequence:RefSeq:WP_009296676.1
COORDINATES: similar to AA sequence:RefSeq:WP_009003363.1
COORDINATES: similar to AA sequence:RefSeq:WP_004802685.1
COORDINATES: protein motif:HMM:NF024362.2
COORDINATES: similar to AA sequence:RefSeq:WP_002576956.1
COORDINATES: similar to AA sequence:RefSeq:WP_019680688.1
COORDINATES: similar to AA sequence:RefSeq:WP_014118852.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002576352.1
COORDINATES: similar to AA sequence:RefSeq:WP_018214023.1
COORDINATES: similar to AA sequence:RefSeq:WP_016324223.1
COORDINATES: similar to AA sequence:RefSeq:WP_016324221.1
COORDINATES: similar to AA sequence:RefSeq:WP_002584774.1
COORDINATES: protein motif:HMM:NF019149.2
COORDINATES: similar to AA sequence:RefSeq:WP_015043386.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273391.1
COORDINATES: similar to AA sequence:RefSeq:WP_002587173.1
COORDINATES: protein motif:HMM:NF025107.2
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:NF038196.1
N-terminal region resembles flavodoxins. C-terminal ferrodoxin region binds two 4Fe-4S clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF018234.2
COORDINATES: similar to AA sequence:RefSeq:WP_002604578.1
COORDINATES: similar to AA sequence:RefSeq:WP_009644804.1
COORDINATES: similar to AA sequence:RefSeq:WP_018307454.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273428.1
COORDINATES: similar to AA sequence:RefSeq:WP_002564637.1
COORDINATES: similar to AA sequence:RefSeq:WP_018213966.1
DUF3991 and toprim domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013623282.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273432.1
COORDINATES: protein motif:HMM:NF039658.1
COORDINATES: similar to AA sequence:RefSeq:WP_018306607.1
COORDINATES: similar to AA sequence:RefSeq:WP_002595377.1
COORDINATES: similar to AA sequence:RefSeq:WP_013777973.1
COORDINATES: similar to AA sequence:RefSeq:WP_015261915.1
COORDINATES: similar to AA sequence:RefSeq:WP_012104190.1
COORDINATES: similar to AA sequence:RefSeq:WP_014793577.1
COORDINATES: similar to AA sequence:RefSeq:WP_005947477.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273442.1
COORDINATES: similar to AA sequence:RefSeq:WP_018306600.1
COORDINATES: similar to AA sequence:RefSeq:WP_004846619.1
COORDINATES: similar to AA sequence:RefSeq:WP_020072874.1
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002587132.1
COORDINATES: similar to AA sequence:RefSeq:WP_014116782.1
COORDINATES: similar to AA sequence:RefSeq:WP_018213987.1
COORDINATES: similar to AA sequence:RefSeq:WP_010965771.1
COORDINATES: similar to AA sequence:RefSeq:WP_018213988.1
COORDINATES: similar to AA sequence:RefSeq:WP_010966759.1
COORDINATES: similar to AA sequence:RefSeq:WP_018213990.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355868.1
COORDINATES: similar to AA sequence:RefSeq:WP_010247771.1
type 1 glutamine amidotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003483118.1
COORDINATES: similar to AA sequence:RefSeq:WP_010250720.1
COORDINATES: similar to AA sequence:RefSeq:WP_010250721.1
COORDINATES: similar to AA sequence:RefSeq:WP_003361497.1
COORDINATES: similar to AA sequence:RefSeq:WP_018214008.1
COORDINATES: similar to AA sequence:RefSeq:WP_020072883.1
COORDINATES: similar to AA sequence:RefSeq:WP_013623303.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273460.1
COORDINATES: similar to AA sequence:RefSeq:WP_020072886.1
COORDINATES: similar to AA sequence:RefSeq:WP_020072887.1
COORDINATES: similar to AA sequence:RefSeq:WP_015757065.1
COORDINATES: similar to AA sequence:RefSeq:WP_013623309.1
COORDINATES: similar to AA sequence:RefSeq:WP_006778114.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273464.1
COORDINATES: similar to AA sequence:RefSeq:WP_002570026.1
COORDINATES: similar to AA sequence:RefSeq:WP_002573733.1
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: similar to AA sequence:RefSeq:WP_006567836.1
COORDINATES: similar to AA sequence:RefSeq:WP_002571428.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273470.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273718.1
COORDINATES: similar to AA sequence:RefSeq:WP_015261854.1
COORDINATES: similar to AA sequence:RefSeq:WP_014314949.1
COORDINATES: protein motif:HMM:NF015340.2
COORDINATES: similar to AA sequence:RefSeq:WP_018305730.1
COORDINATES: protein motif:HMM:NF025555.2
COORDINATES: protein motif:HMM:NF018926.2
COORDINATES: protein motif:HMM:NF013691.2
COORDINATES: similar to AA sequence:RefSeq:WP_014117585.1
COORDINATES: similar to AA sequence:RefSeq:WP_014116732.1
COORDINATES: protein motif:HMM:NF025466.2
COORDINATES: similar to AA sequence:RefSeq:WP_009203687.1
putative DNA binding domain-containing protein
COORDINATES: protein motif:HMM:NF025918.2
COORDINATES: similar to AA sequence:RefSeq:WP_009247173.1
COORDINATES: similar to AA sequence:RefSeq:WP_007886005.1
3'-5' exoribonuclease YhaM family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014184809.1
COORDINATES: protein motif:HMM:NF020349.2
COORDINATES: similar to AA sequence:RefSeq:WP_015557401.1
COORDINATES: similar to AA sequence:RefSeq:WP_010235980.1
RNA polymerase sporulation sigma factor SigG
COORDINATES: similar to AA sequence:RefSeq:WP_016440929.1
COORDINATES: similar to AA sequence:RefSeq:WP_016288840.1
COORDINATES: similar to AA sequence:RefSeq:WP_003501734.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036555.1
COORDINATES: similar to AA sequence:RefSeq:WP_015552554.1
COORDINATES: similar to AA sequence:RefSeq:WP_014117151.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
GO:0008216 - spermidine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009063003.1
saccharopine dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002598129.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014117148.1
COORDINATES: similar to AA sequence:RefSeq:WP_008398905.1
COORDINATES: similar to AA sequence:RefSeq:WP_014117146.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003808.0
GO:0008743 - L-threonine 3-dehydrogenase activity [Evidence IEA]
GO:0006567 - threonine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003515279.1
COORDINATES: similar to AA sequence:RefSeq:WP_011860902.1
COORDINATES: similar to AA sequence:RefSeq:WP_004033436.1
COORDINATES: similar to AA sequence:RefSeq:WP_012198394.1
COORDINATES: similar to AA sequence:RefSeq:WP_005945260.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_004036250.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004066078.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036247.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036245.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004036243.1
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_005215746.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034058.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034057.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037479.1
GO:0015293 - symporter activity [Evidence IEA]
GO:0032329 - serine transport [Evidence IEA]; GO:0015826 - threonine transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006783032.1
GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006565 - L-serine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008723983.1
L-serine ammonia-lyase, iron-sulfur-dependent subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012738769.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012201293.1
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: similar to AA sequence:RefSeq:WP_007063018.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034830.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
Fe-S cluster assembly scaffold protein NifU
COORDINATES: similar to AA sequence:RefSeq:WP_004625686.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00634.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034837.1
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034841.1
COORDINATES: similar to AA sequence:RefSeq:WP_008718055.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909827.1
COORDINATES: similar to AA sequence:RefSeq:WP_005362888.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034850.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00237.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034854.1
transcription antitermination factor NusB
COORDINATES: protein motif:HMM:NF015721.2
Asp23/Gls24 family envelope stress response protein
COORDINATES: protein motif:HMM:NF024097.2
COORDINATES: protein motif:HMM:NF021121.2
COORDINATES: protein motif:HMM:NF021088.2
COORDINATES: similar to AA sequence:RefSeq:WP_004033672.1
COORDINATES: similar to AA sequence:RefSeq:WP_005925971.1
COORDINATES: protein motif:HMM:NF021090.2
COORDINATES: protein motif:HMM:NF040318.1
COORDINATES: protein motif:HMM:NF016296.2
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004034130.1
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012678.2
iron-containing alcohol dehydrogenase family protein
COORDINATES: protein motif:HMM:NF013122.2
COORDINATES: similar to AA sequence:RefSeq:WP_004611433.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015799.2
COORDINATES: similar to AA sequence:RefSeq:WP_018598636.1
GO:0004061 - arylformamidase activity [Evidence IEA]
GO:0019441 - tryptophan catabolic process to kynurenine [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: protein motif:HMM:NF022112.2
COORDINATES: similar to AA sequence:RefSeq:WP_004034123.1
COORDINATES: protein motif:HMM:TIGR00426.1
helix-hairpin-helix domain-containing protein
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: similar to AA sequence:RefSeq:WP_008392720.1
COORDINATES: similar to AA sequence:RefSeq:WP_014117361.1
COORDINATES: similar to AA sequence:RefSeq:WP_011462102.1
AlkA N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014821.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Ada metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012425750.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010251552.1
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_006875168.1
COORDINATES: similar to AA sequence:RefSeq:WP_014312220.1
COORDINATES: similar to AA sequence:RefSeq:WP_012451671.1
COORDINATES: protein motif:HMM:TIGR01641.1
GO:0016032 - viral process [Evidence IEA]; GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01547.1
COORDINATES: similar to AA sequence:RefSeq:WP_003408602.1
COORDINATES: protein motif:HMM:NF024422.2
COORDINATES: similar to AA sequence:RefSeq:WP_013657725.1
COORDINATES: similar to AA sequence:RefSeq:WP_002594579.1
COORDINATES: protein motif:HMM:NF022744.2
COORDINATES: similar to AA sequence:RefSeq:WP_012102349.1
COORDINATES: similar to AA sequence:RefSeq:WP_015359733.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006353816.1
COORDINATES: similar to AA sequence:RefSeq:WP_007704928.1
COORDINATES: similar to AA sequence:RefSeq:WP_008974843.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
SigB/SigF/SigG family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_004033964.1
GO:0004672 - protein kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00377.1
GO:0045152 - antisigma factor binding [Evidence IEA]
This anti-anti-sigma factor, or anti-sigma factor antagonist, belongs to a family that includes characterized members SpoIIAA, RsbV, RsfA, and RsfB; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003515579.1
RNA polymerase sporulation sigma factor SigK
COORDINATES: similar to AA sequence:RefSeq:WP_006772938.1
COORDINATES: similar to AA sequence:RefSeq:WP_008394004.1
GO:0017113 - dihydropyrimidine dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006210 - thymine catabolic process [Evidence IEA]; GO:0006212 - uracil catabolic process [Evidence IEA]
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
COORDINATES: similar to AA sequence:RefSeq:WP_008753197.1
COORDINATES: similar to AA sequence:RefSeq:WP_015557239.1
COORDINATES: protein motif:HMM:NF014218.2
COORDINATES: similar to AA sequence:RefSeq:WP_005356384.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018589539.1
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: similar to AA sequence:RefSeq:WP_002846157.1
COORDINATES: similar to AA sequence:RefSeq:WP_004167183.1
COORDINATES: similar to AA sequence:RefSeq:WP_008393996.1
COORDINATES: similar to AA sequence:RefSeq:WP_002846153.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322074.1
COORDINATES: similar to AA sequence:RefSeq:WP_002846145.1
COORDINATES: protein motif:HMM:NF016493.2
GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF022554.2
COORDINATES: similar to AA sequence:RefSeq:WP_003428851.1
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009065551.1
COORDINATES: similar to AA sequence:RefSeq:WP_009065671.1
COORDINATES: protein motif:HMM:TIGR02532.1
COORDINATES: protein motif:HMM:NF019217.2
COORDINATES: similar to AA sequence:RefSeq:WP_013382032.1
COORDINATES: similar to AA sequence:RefSeq:WP_003498795.1
COORDINATES: similar to AA sequence:RefSeq:WP_004033940.1
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01499.1
folylpolyglutamate synthase/dihydrofolate synthase family protein
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: similar to AA sequence:RefSeq:WP_013659151.1
COORDINATES: similar to AA sequence:RefSeq:WP_004033727.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004034138.1
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007861834.1
GO:0008721 - D-serine ammonia-lyase activity [Evidence IEA]
GO:0046416 - D-amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010251036.1
COORDINATES: similar to AA sequence:RefSeq:WP_004033998.1
COORDINATES: similar to AA sequence:RefSeq:WP_011721119.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034580.1
COORDINATES: protein motif:HMM:NF016932.2
COORDINATES: similar to AA sequence:RefSeq:WP_009902385.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003518637.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036223.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015525156.1
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF016959.2
COORDINATES: protein motif:HMM:NF037631.2
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: similar to AA sequence:RefSeq:WP_014828608.1
COORDINATES: similar to AA sequence:RefSeq:WP_007890012.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF024112.2
COORDINATES: similar to AA sequence:RefSeq:WP_014117998.1
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014520685.1
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018086079.1
COORDINATES: similar to AA sequence:RefSeq:WP_014354585.1
COORDINATES: similar to AA sequence:RefSeq:WP_003545134.1
COORDINATES: similar to AA sequence:RefSeq:WP_003515596.1
COORDINATES: similar to AA sequence:RefSeq:WP_016147901.1
COORDINATES: similar to AA sequence:RefSeq:WP_012047738.1
PhzF family phenazine biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_006524121.1
COORDINATES: similar to AA sequence:RefSeq:WP_011928298.1
COORDINATES: similar to AA sequence:RefSeq:WP_003376842.1
COORDINATES: similar to AA sequence:RefSeq:WP_007287680.1
formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme
COORDINATES: protein motif:HMM:TIGR02494.1
GO:0043687 - post-translational protein modification [Evidence IEA]
glycyl-radical enzyme activating protein
COORDINATES: protein motif:HMM:NF039796.1
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_013273792.1
COORDINATES: similar to AA sequence:RefSeq:WP_008391813.1
COORDINATES: similar to AA sequence:RefSeq:WP_007063615.1
COORDINATES: similar to AA sequence:RefSeq:WP_008391812.1
COORDINATES: similar to AA sequence:RefSeq:WP_013840355.1
RNA polymerase sporulation sigma factor SigH
COORDINATES: similar to AA sequence:RefSeq:WP_004035135.1
COORDINATES: similar to AA sequence:RefSeq:WP_005331454.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_004035139.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
ribonuclease III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004035140.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006427966.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003457926.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011986495.1
COORDINATES: protein motif:HMM:NF024197.2
COORDINATES: similar to AA sequence:RefSeq:WP_007787614.1
flotillin-like protein involved in membrane lipid rafts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_016208476.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004038989.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004038684.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038686.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004038688.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003380675.1
COORDINATES: protein motif:HMM:TIGR02254.1
GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
YjjG family noncanonical pyrimidine nucleotidase
COORDINATES: similar to AA sequence:RefSeq:WP_017210425.1
COORDINATES: similar to AA sequence:RefSeq:WP_004840931.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_008976577.1
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015925336.1
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005610673.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004036297.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF019334.2
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF033484.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_003504211.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: protein motif:HMM:NF011494.0
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:WP_005334349.1
COORDINATES: similar to AA sequence:RefSeq:WP_011837872.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003517641.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:NF036997.2
COORDINATES: similar to AA sequence:RefSeq:WP_015516327.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_004036276.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003366139.1
COORDINATES: similar to AA sequence:RefSeq:WP_004463707.1
COORDINATES: protein motif:HMM:NF017633.2
NFACT RNA binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003436224.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159398.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00757.1
GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015261957.1
COORDINATES: similar to AA sequence:RefSeq:WP_011988846.1
COORDINATES: protein motif:HMM:TIGR02773.1
COORDINATES: similar to AA sequence:RefSeq:WP_015042791.1
COORDINATES: similar to AA sequence:RefSeq:WP_008716394.1
COORDINATES: similar to AA sequence:RefSeq:WP_013381483.1
COORDINATES: similar to AA sequence:RefSeq:WP_003465515.1
COORDINATES: similar to AA sequence:RefSeq:WP_009530975.1
COORDINATES: similar to AA sequence:RefSeq:WP_007718617.1
COORDINATES: similar to AA sequence:RefSeq:WP_009757320.1
COORDINATES: protein motif:HMM:NF027987.2
COORDINATES: similar to AA sequence:RefSeq:WP_002600538.1
COORDINATES: similar to AA sequence:RefSeq:WP_014255219.1
COORDINATES: protein motif:HMM:NF015444.2
COORDINATES: protein motif:HMM:NF015411.2
GO:0050661 - NADP binding [Evidence IEA]
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016320529.1
COORDINATES: similar to AA sequence:RefSeq:WP_016320527.1
COORDINATES: similar to AA sequence:RefSeq:WP_016323743.1
COORDINATES: similar to AA sequence:RefSeq:WP_005950143.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0005488 - binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
DctP family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005365942.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_009083397.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004223071.1
GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
phosphoribosylaminoimidazolecarboxamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009644702.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004847562.1
COORDINATES: similar to AA sequence:RefSeq:WP_009643509.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015558815.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_009643518.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006353103.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_006353104.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_005366074.1
COORDINATES: similar to AA sequence:RefSeq:WP_004845348.1
COORDINATES: similar to AA sequence:RefSeq:WP_009535547.1
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014116556.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009215614.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009525555.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008975120.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009535542.1
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009170200.1
COORDINATES: protein motif:HMM:NF021252.2
COORDINATES: protein motif:HMM:NF016160.2
SoxR reducing system RseC family protein
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_002598506.1
COORDINATES: similar to AA sequence:RefSeq:WP_006565849.1
COORDINATES: similar to AA sequence:RefSeq:WP_004843869.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002583273.1
GO:0008959 - phosphate acetyltransferase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005366383.1
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_006780373.1
COORDINATES: similar to AA sequence:RefSeq:WP_016286240.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF010191.0
COORDINATES: protein motif:HMM:NF019292.2
COORDINATES: similar to AA sequence:RefSeq:WP_004036315.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036314.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004036308.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_004038995.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008368944.1
COORDINATES: similar to AA sequence:RefSeq:WP_012302149.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
trp RNA-binding attenuation protein MtrB
COORDINATES: similar to AA sequence:RefSeq:WP_004039000.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002603144.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038554.1
COORDINATES: similar to AA sequence:RefSeq:WP_003367357.1
COORDINATES: similar to AA sequence:RefSeq:WP_005336994.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:NF020904.2
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: protein motif:HMM:NF014898.2
COORDINATES: protein motif:HMM:NF023524.2
COORDINATES: protein motif:HMM:NF028245.2
COORDINATES: protein motif:HMM:TIGR01603.1
COORDINATES: similar to AA sequence:RefSeq:WP_011878911.1
COORDINATES: similar to AA sequence:RefSeq:WP_011878912.1
COORDINATES: similar to AA sequence:RefSeq:WP_011878913.1
COORDINATES: protein motif:HMM:TIGR01537.1
COORDINATES: similar to AA sequence:RefSeq:WP_012099467.1
COORDINATES: similar to AA sequence:RefSeq:WP_011878916.1
P27 family phage terminase small subunit
COORDINATES: protein motif:HMM:NF013964.2
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009259992.1
phosphoadenosine phosphosulfate reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010296157.1
COORDINATES: similar to AA sequence:RefSeq:WP_015543983.1
COORDINATES: similar to AA sequence:RefSeq:WP_003438030.1
COORDINATES: similar to AA sequence:RefSeq:WP_008724982.1
COORDINATES: similar to AA sequence:RefSeq:WP_014311817.1
radical SAM/SPASM domain-containing protein
COORDINATES: protein motif:HMM:NF008165.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF028500.2
COORDINATES: similar to AA sequence:RefSeq:WP_012199185.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036304.1
COORDINATES: similar to AA sequence:RefSeq:WP_002567525.1
COORDINATES: protein motif:HMM:NF018513.2
COORDINATES: protein motif:HMM:NF037995.1
COORDINATES: protein motif:HMM:NF024950.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_076611255.1
COORDINATES: similar to AA sequence:RefSeq:WP_002213759.1
COORDINATES: similar to AA sequence:RefSeq:WP_010963798.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013657080.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003514914.1
COORDINATES: similar to AA sequence:RefSeq:WP_020814690.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014052.2
COORDINATES: similar to AA sequence:RefSeq:WP_004036361.1
COORDINATES: similar to AA sequence:RefSeq:WP_008677994.1
COORDINATES: protein motif:HMM:NF013413.2
COORDINATES: protein motif:HMM:TIGR02860.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035082.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012200879.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_005350609.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009248457.1
COORDINATES: protein motif:HMM:NF016114.2
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016287230.1
COORDINATES: protein motif:HMM:NF024760.2
GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
PrsW family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF019325.2
COORDINATES: similar to AA sequence:RefSeq:WP_015358561.1
COORDINATES: similar to AA sequence:RefSeq:WP_002604626.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034251.1
COORDINATES: similar to AA sequence:RefSeq:WP_003511603.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003459798.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034259.1
COORDINATES: similar to AA sequence:RefSeq:WP_003498588.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003449423.1
COORDINATES: protein motif:HMM:NF004160.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_004034267.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013528.2
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_004034271.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016440457.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034274.1
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004034276.1
COORDINATES: similar to AA sequence:RefSeq:WP_014255599.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034280.1
COORDINATES: similar to AA sequence:RefSeq:WP_003412859.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034965.1
COORDINATES: similar to AA sequence:RefSeq:WP_015394251.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034968.1
COORDINATES: similar to AA sequence:RefSeq:WP_007492308.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015514154.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1
COORDINATES: protein motif:HMM:TIGR00530.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004034979.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004034983.1
COORDINATES: similar to AA sequence:RefSeq:WP_004033891.1
COORDINATES: similar to AA sequence:RefSeq:WP_015520818.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: similar to AA sequence:RefSeq:WP_010966596.1
GO:0008677 - 2-dehydropantoate 2-reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035985.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021384.2
COORDINATES: similar to AA sequence:RefSeq:WP_003370692.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004444055.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: protein motif:HMM:NF040162.1
COORDINATES: similar to AA sequence:RefSeq:WP_010252451.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016322591.1
COORDINATES: similar to AA sequence:RefSeq:WP_008679344.1
COORDINATES: similar to AA sequence:RefSeq:WP_010963739.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036047.1
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_015573233.1
low molecular weight protein-tyrosine-phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_009297674.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002566222.1
COORDINATES: similar to AA sequence:RefSeq:WP_020815103.1
COORDINATES: similar to AA sequence:RefSeq:WP_018597965.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: similar to AA sequence:RefSeq:WP_003497676.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002602117.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: similar to AA sequence:RefSeq:WP_018597963.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013238596.1
COORDINATES: similar to AA sequence:RefSeq:WP_007061717.1
COORDINATES: similar to AA sequence:RefSeq:WP_018593317.1
cation diffusion facilitator family transporter
COORDINATES: nucleotide motif:Rfam:14.4:RF02683
NiCo riboswitches sense nickel or cobalt ions; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_015542346.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004848825.1
COORDINATES: similar to AA sequence:RefSeq:WP_005950698.1
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00331.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: similar to AA sequence:RefSeq:WP_006440904.1
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014794233.1
GO:0008838 - diaminopropionate ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018589568.1
COORDINATES: similar to AA sequence:RefSeq:WP_002582552.1
COORDINATES: similar to AA sequence:RefSeq:WP_008706076.1
COORDINATES: similar to AA sequence:RefSeq:WP_012450370.1
COORDINATES: similar to AA sequence:RefSeq:WP_011459713.1
COORDINATES: protein motif:HMM:NF021449.2
DUF2161 family putative PD-(D/E)XK-type phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_017417162.1
COORDINATES: protein motif:HMM:NF013570.2
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006439671.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_006858216.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037338.1
COORDINATES: similar to AA sequence:RefSeq:WP_009082709.1
COORDINATES: similar to AA sequence:RefSeq:WP_016283008.1
COORDINATES: similar to AA sequence:RefSeq:WP_008719727.1
COORDINATES: similar to AA sequence:RefSeq:WP_004619842.1
COORDINATES: similar to AA sequence:RefSeq:WP_004619329.1
COORDINATES: similar to AA sequence:RefSeq:WP_004619327.1
COORDINATES: similar to AA sequence:RefSeq:WP_004619323.1
COORDINATES: similar to AA sequence:RefSeq:WP_009461603.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_008976712.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_006858770.1
COORDINATES: similar to AA sequence:RefSeq:WP_002603420.1
COORDINATES: similar to AA sequence:RefSeq:WP_012738555.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037286.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00557
ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_003515020.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158357.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037296.1
transcription termination/antitermination protein NusG
COORDINATES: protein motif:HMM:TIGR00964.1
COORDINATES: similar to AA sequence:RefSeq:WP_015521109.1
COORDINATES: similar to AA sequence:RefSeq:WP_016322902.1
TIGR03905 family TSCPD domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005929040.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037385.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037386.1
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: protein motif:HMM:NF038347.1
permease-like cell division protein FtsX
COORDINATES: similar to AA sequence:RefSeq:WP_013658457.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002566963.1
COORDINATES: protein motif:HMM:NF014627.2
COORDINATES: similar to AA sequence:RefSeq:WP_004038728.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:TIGR03609.1
GO:0046919 - pyruvyltransferase activity [Evidence IEA]
GO:0042545 - cell wall modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF025582.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:NF021507.2
phosphodiester glycosidase family protein
COORDINATES: protein motif:HMM:NF015510.2
outer-membrane lipoprotein carrier protein LolA
COORDINATES: similar to AA sequence:RefSeq:WP_010246038.1
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_006860364.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00350.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160438.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037366.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004036528.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012201752.1
COORDINATES: protein motif:HMM:NF024057.2
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: similar to AA sequence:RefSeq:WP_004625383.1
COORDINATES: protein motif:HMM:NF014566.2
COORDINATES: similar to AA sequence:RefSeq:WP_010243341.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253700.1
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004038032.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0046168 - glycerol-3-phosphate catabolic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_007592430.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_012743121.1
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: protein motif:HMM:NF014119.2
COORDINATES: similar to AA sequence:RefSeq:WP_009246096.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012200476.1
COORDINATES: similar to AA sequence:RefSeq:WP_008707417.1
COORDINATES: protein motif:HMM:NF018633.2
COORDINATES: similar to AA sequence:RefSeq:WP_015544672.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037635.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037636.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_010167289.1
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
5'-methylthioadenosine/adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_013821672.1
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003513139.1
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: similar to AA sequence:RefSeq:WP_013724533.1
COORDINATES: similar to AA sequence:RefSeq:WP_004620612.1
COORDINATES: similar to AA sequence:RefSeq:WP_008981620.1
COORDINATES: protein motif:HMM:NF024545.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037594.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004842601.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038053.1
COORDINATES: similar to AA sequence:RefSeq:WP_008908000.1
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014253695.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: similar to AA sequence:RefSeq:WP_004035421.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
glucose-1-phosphate adenylyltransferase subunit GlgD
COORDINATES: similar to AA sequence:RefSeq:WP_004614341.1
COORDINATES: similar to AA sequence:RefSeq:WP_015528670.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005332645.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_004037953.1
COORDINATES: similar to AA sequence:RefSeq:WP_017209945.1
GO:0019277 - UDP-N-acetylgalactosamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021186.2
two-component system regulatory protein YycI
COORDINATES: similar to AA sequence:RefSeq:WP_004037977.1
hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010965697.1
COORDINATES: similar to AA sequence:RefSeq:WP_004845986.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008397129.1
tRNA1(Val) (adenine(37)-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014256962.1
COORDINATES: protein motif:HMM:TIGR00678.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035800.1
COORDINATES: similar to AA sequence:RefSeq:WP_004623764.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005304.0
COORDINATES: protein motif:HMM:NF018914.2
COORDINATES: similar to AA sequence:RefSeq:WP_004038218.1
COORDINATES: similar to AA sequence:RefSeq:WP_009263418.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015527166.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015574608.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004038225.1
COORDINATES: similar to AA sequence:RefSeq:WP_007061655.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019214595.1
COORDINATES: similar to AA sequence:RefSeq:WP_014521498.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009290019.1
COORDINATES: protein motif:HMM:NF013782.2
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003376393.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016149226.1
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006874256.1
COORDINATES: protein motif:HMM:NF039185.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037491.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037495.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005946486.1
GO:0033958 - DNA-deoxyinosine glycosylase activity [Evidence IEA]
GO:0006285 - base-excision repair, AP site formation [Evidence IEA]
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: similar to AA sequence:RefSeq:WP_007591325.1
metal-dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009063384.1
COORDINATES: similar to AA sequence:RefSeq:WP_013271292.1
COORDINATES: similar to AA sequence:RefSeq:WP_013271291.1
COORDINATES: similar to AA sequence:RefSeq:WP_013271290.1
COORDINATES: similar to AA sequence:RefSeq:WP_004039010.1
COORDINATES: protein motif:HMM:NF024304.2
COORDINATES: similar to AA sequence:RefSeq:WP_003498550.1
COORDINATES: similar to AA sequence:RefSeq:WP_015550514.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003515466.1
COORDINATES: similar to AA sequence:RefSeq:WP_016285550.1
COORDINATES: similar to AA sequence:RefSeq:WP_006568289.1
COORDINATES: protein motif:HMM:NF039359.1
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035626.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035625.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035624.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02865.1
COORDINATES: protein motif:HMM:TIGR01891.1
COORDINATES: similar to AA sequence:RefSeq:WP_010963856.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035847.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035851.1
COORDINATES: similar to AA sequence:RefSeq:WP_015544440.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_016296986.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_004035306.1
GO:0004746 - riboflavin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005602619.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: similar to AA sequence:RefSeq:WP_009289044.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02872.1
sporulation integral membrane protein YtvI
COORDINATES: protein motif:HMM:NF017655.2
COORDINATES: similar to AA sequence:RefSeq:WP_020815132.1
COORDINATES: similar to AA sequence:RefSeq:WP_002600632.1
COORDINATES: protein motif:HMM:NF024241.2
COORDINATES: protein motif:HMM:NF012500.2
COORDINATES: similar to AA sequence:RefSeq:WP_004606094.1
phBC6A51 family helix-turn-helix protein
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002586523.1
COORDINATES: protein motif:HMM:NF040136.1
COORDINATES: similar to AA sequence:RefSeq:WP_009258411.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037504.1
COORDINATES: protein motif:HMM:NF015889.2
GO:0015661 - L-lysine efflux transmembrane transporter activity [Evidence IEA]
GO:1903401 - L-lysine transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008679760.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019226108.1
COORDINATES: similar to AA sequence:RefSeq:WP_009288896.1
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: similar to AA sequence:RefSeq:WP_010236796.1
COORDINATES: similar to AA sequence:RefSeq:WP_008981913.1
COORDINATES: similar to AA sequence:RefSeq:WP_007286184.1
COORDINATES: similar to AA sequence:RefSeq:WP_010246333.1
COORDINATES: similar to AA sequence:RefSeq:WP_008750191.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
large-conductance mechanosensitive channel protein MscL
COORDINATES: similar to AA sequence:RefSeq:WP_004035546.1
COORDINATES: protein motif:HMM:NF018852.2
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013274031.1
COORDINATES: protein motif:HMM:NF022179.2
late competence development ComFB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016322671.1
COORDINATES: similar to AA sequence:RefSeq:WP_007489283.1
COORDINATES: similar to AA sequence:RefSeq:WP_013274036.1
COORDINATES: protein motif:HMM:TIGR03506.1
COORDINATES: similar to AA sequence:RefSeq:WP_009250547.1
COORDINATES: similar to AA sequence:RefSeq:WP_004072133.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_013274040.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035530.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035528.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035526.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035524.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: protein motif:HMM:NF016250.2
COORDINATES: similar to AA sequence:RefSeq:WP_004035514.1
COORDINATES: similar to AA sequence:RefSeq:WP_007489267.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035510.1
FliM/FliN family flagellar motor switch protein
COORDINATES: similar to AA sequence:RefSeq:WP_004072111.1
COORDINATES: similar to AA sequence:RefSeq:WP_009266735.1
COORDINATES: similar to AA sequence:RefSeq:WP_004072107.1
COORDINATES: similar to AA sequence:RefSeq:WP_015553132.1
flagellar hook-basal body complex protein
COORDINATES: protein motif:HMM:NF015896.2
flagellar hook capping FlgD N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: similar to AA sequence:RefSeq:WP_016298394.1
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: similar to AA sequence:RefSeq:WP_004602623.1
COORDINATES: similar to AA sequence:RefSeq:WP_006443436.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035578.1
protein-glutamate O-methyltransferase CheR
COORDINATES: similar to AA sequence:RefSeq:WP_013274018.1
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: protein motif:HMM:NF016223.2
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: protein motif:HMM:NF016985.2
COORDINATES: protein motif:HMM:TIGR02492.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:NF012874.2
COORDINATES: similar to AA sequence:RefSeq:WP_016298384.1
COORDINATES: protein motif:HMM:NF014660.2
COORDINATES: similar to AA sequence:RefSeq:WP_004035562.1
COORDINATES: similar to AA sequence:RefSeq:WP_012739626.1
COORDINATES: similar to AA sequence:RefSeq:WP_014118163.1
COORDINATES: similar to AA sequence:RefSeq:WP_009250785.1
amino acid ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF024085.2
COORDINATES: protein motif:HMM:NF021981.2
COORDINATES: similar to AA sequence:RefSeq:WP_014312286.1
COORDINATES: similar to AA sequence:RefSeq:WP_002564757.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_004035965.1
COORDINATES: similar to AA sequence:RefSeq:WP_005212627.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656652.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008907721.1
COORDINATES: similar to AA sequence:RefSeq:WP_009242226.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035956.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009262246.1
COORDINATES: protein motif:HMM:NF017226.2
COORDINATES: protein motif:HMM:TIGR02453.1
COORDINATES: similar to AA sequence:RefSeq:WP_004606830.1
COORDINATES: similar to AA sequence:RefSeq:WP_008368795.1
COORDINATES: similar to AA sequence:RefSeq:WP_010294483.1
manganese efflux pump MntP family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014263245.1
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: protein motif:HMM:NF021118.2
COORDINATES: similar to AA sequence:RefSeq:WP_004035936.1
COORDINATES: similar to AA sequence:RefSeq:WP_007591079.1
COORDINATES: similar to AA sequence:RefSeq:WP_008720828.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035933.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_006572826.1
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013655647.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012158861.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004035928.1
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_018594997.1
COORDINATES: similar to AA sequence:RefSeq:WP_018591435.1
deoxyuridine 5'-triphosphate nucleotidohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_013497080.1
COORDINATES: similar to AA sequence:RefSeq:WP_007713314.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036135.1
COORDINATES: similar to AA sequence:RefSeq:WP_006864138.1
COORDINATES: similar to AA sequence:RefSeq:WP_003410267.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_010236849.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
energy coupling factor transporter S component ThiW
COORDINATES: similar to AA sequence:RefSeq:WP_004036123.1
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: similar to AA sequence:RefSeq:WP_004036082.1
COORDINATES: similar to AA sequence:RefSeq:WP_013379065.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_013239698.1
3-phosphoglycerate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004037653.1
COORDINATES: similar to AA sequence:RefSeq:WP_003357176.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_003409491.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004037439.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010251682.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015522176.1
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF019097.2
COORDINATES: similar to AA sequence:RefSeq:WP_004038195.1
COORDINATES: similar to AA sequence:RefSeq:WP_014095335.1
COORDINATES: similar to AA sequence:RefSeq:WP_008703471.1
COORDINATES: similar to AA sequence:RefSeq:WP_019161980.1
COORDINATES: similar to AA sequence:RefSeq:WP_006440775.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038209.1
COORDINATES: protein motif:HMM:NF024702.2
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008392306.1
COORDINATES: similar to AA sequence:RefSeq:WP_009266963.1
COORDINATES: similar to AA sequence:RefSeq:WP_008424054.1
COORDINATES: similar to AA sequence:RefSeq:WP_015565297.1
COORDINATES: similar to AA sequence:RefSeq:WP_015563832.1
COORDINATES: similar to AA sequence:RefSeq:WP_015523844.1
GO:0031179 - peptide modification [Evidence IEA]
thioether cross-link-forming SCIFF peptide maturase
COORDINATES: similar to AA sequence:RefSeq:WP_015563834.1
COORDINATES: protein motif:HMM:NF014171.2
TrkA C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004630656.1
COORDINATES: similar to AA sequence:RefSeq:WP_013486212.1
COORDINATES: similar to AA sequence:RefSeq:WP_004630584.1
COORDINATES: similar to AA sequence:RefSeq:WP_013843142.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
glycine betaine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: similar to AA sequence:RefSeq:WP_015533744.1
COORDINATES: similar to AA sequence:RefSeq:WP_012102726.1
COORDINATES: similar to AA sequence:RefSeq:WP_015394547.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355051.1
COORDINATES: protein motif:HMM:NF026253.2
COORDINATES: similar to AA sequence:RefSeq:WP_004037676.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: similar to AA sequence:RefSeq:WP_004037689.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013658341.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003450338.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015358384.1
COORDINATES: protein motif:HMM:NF013180.2
COORDINATES: similar to AA sequence:RefSeq:WP_005603655.1
COORDINATES: similar to AA sequence:RefSeq:WP_003513155.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035322.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008397754.1
COORDINATES: similar to AA sequence:RefSeq:WP_008980397.1
COORDINATES: protein motif:HMM:NF024135.2
COORDINATES: similar to AA sequence:RefSeq:WP_004038096.1
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF019085.2
pro-sigmaK processing inhibitor BofA family protein
COORDINATES: protein motif:HMM:NF022165.2
COORDINATES: similar to AA sequence:RefSeq:WP_010965677.1
GO:0047200 - tetrahydrodipicolinate N-acetyltransferase activity [Evidence IEA]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007059662.1
COORDINATES: similar to AA sequence:RefSeq:WP_014825523.1
COORDINATES: similar to AA sequence:RefSeq:WP_009002579.1
COORDINATES: similar to AA sequence:RefSeq:WP_016146254.1
COORDINATES: similar to AA sequence:RefSeq:WP_018594313.1
COORDINATES: similar to AA sequence:RefSeq:WP_004845429.1
COORDINATES: protein motif:HMM:NF025620.2
carbohydrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015534001.1
COORDINATES: similar to AA sequence:RefSeq:WP_015359421.1
polyphosphate polymerase domain-containing protein
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: similar to AA sequence:RefSeq:WP_013659205.1
GO:0032466 - negative regulation of cytokinesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012065746.1
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_003513361.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_003513360.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_004035257.1
RNA-binding cell elongation regulator Jag/EloR
COORDINATES: protein motif:HMM:TIGR03592.1
YidC/Oxa1 family membrane protein insertase
COORDINATES: similar to AA sequence:RefSeq:WP_003503700.1
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_009005728.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012201940.1