Bos indicus isolate QUIL7308 breed Nelore chromosome X, Bos_indicus_1.0, whole genome shotgun sequence.
type: Entry
definition: Bos indicus isolate QUIL7308 breed Nelore chromosome X, Bos_indicus_1.0, whole genome shotgun sequence.
sequence version: NC_032679.1
sequence date: 2017-01-12
sequence: sequence
division: CON
label: NC_032679.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA360096
dblink: SAMN02953802
keyword: WGS
keyword: RefSeq
source: Bos indicus (Bos taurus indicus)
organism: Bos indicus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos.
reference: 1
references: 22315242
reference: 2
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003050.1.\nAssembly name: Bos_indicus_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Genoa Biotecnologia SA on\n2014/11/25. The original whole-genome shotgun project has the\naccession AGFL00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Genoa Biotecnologia SA\nAssembly Method :: BWA v. 0.5.9\nAssembly Name :: Bos_indicus_1.0\nReference-guided Assembly :: GCF_000003205.2; Btau_4.0\nGenome Coverage :: 52x\nSequencing Technology :: SOLiD\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Bos indicus Annotation Release 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 88516652
topology: linear
so has quality: SO_0000987
location: 1..88516652
location: region:1-88516652:1
RO_0002162: 9915

NC_032679
type: RefSeq
SIO_000068: refseq

PRJNA360096
type: BioProject
SIO_000068: bioproject

SAMN02953802
type: BioSample
SIO_000068: biosample

1
title: Genome sequence and assembly of Bos indicus
author: Canavez, F.C.
author: Luche, D.D.
author: Stothard, P.
author: Leite, K.R.
author: Sousa-Canavez, J.M.
author: Plastow, G.
author: Meidanis, J.
author: Souza, M.A.
author: Feijao, P.
author: Moore, S.S.
author: Camara-Lopes, L.H.
journal: J. Hered.
volume: 103
issue: 3
pages: 342-348
year: 2012
pubmed: 22315242

22315242
type: PubMed
SIO_000068: pubmed

2
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88516652:1
position: 88516652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-88516652:1:source
so part of: sequence
organism: Bos indicus
mol type: genomic DNA
isolate: QUIL7308
chromosome: X
sex: male
tissue type: peripheral blood mononuclear cells
country: Brazil
breed: Nelore
note: animal owned by Agropecuaria Quilombo Inc.

9915
type: Taxonomy
SIO_000068: taxonomy

ATP1B4
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ATP1B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 357473..404611
location: region:357473-404611:1
so has part: feature:357473-404611:1:exon
subclass of: SO_0000010

109555144
type: Gene
SIO_000068: ncbigene

position:357473:1
position: 357473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404611:1
position: 404611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357473-404611:1:exon

ATP1B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ATP1B4
product: ATPase Na+/K+ transporting family member beta 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 134 samples with support for all annotated introns
transcript id: XM_019955746.1
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(357473..357770,361699..361957,365914..366042,366311..366415,369556..369752,370391..370447,403586..404611)
location: region:357473-404611:1
so has part: feature:357473-357770:1:exon
so has part: feature:361699-361957:1:exon
so has part: feature:365914-366042:1:exon
so has part: feature:366311-366415:1:exon
so has part: feature:369556-369752:1:exon
so has part: feature:370391-370447:1:exon
so has part: feature:403586-404611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357473-357770:1:exon

position:357770:1
position: 357770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361699-361957:1:exon

position:361699:1
position: 361699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361957:1
position: 361957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365914-366042:1:exon

position:365914:1
position: 365914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366042:1
position: 366042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:366311-366415:1:exon

position:366311:1
position: 366311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366415:1
position: 366415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:369556-369752:1:exon

position:369556:1
position: 369556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369752:1
position: 369752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:370391-370447:1:exon

position:370391:1
position: 370391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370447:1
position: 370447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:403586-404611:1:exon

position:403586:1
position: 403586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP1B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ATP1B4
product: ATPase Na+/K+ transporting family member beta 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_019955745.1
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(357483..357770,360894..361564,361699..361957,365914..366042,366311..366415,369556..369752,370391..370447,374244..374339,375069..375195,403586..403725)
location: region:357483-403725:1
so has part: feature:357483-357770:1:exon
so has part: feature:360894-361564:1:exon
so has part: feature:361699-361957:1:exon
so has part: feature:365914-366042:1:exon
so has part: feature:366311-366415:1:exon
so has part: feature:369556-369752:1:exon
so has part: feature:370391-370447:1:exon
so has part: feature:374244-374339:1:exon
so has part: feature:375069-375195:1:exon
so has part: feature:403586-403725:1:exon

position:357483:1
position: 357483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403725:1
position: 403725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357483-357770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360894-361564:1:exon

position:360894:1
position: 360894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361564:1
position: 361564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:361699-361957:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:365914-366042:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:366311-366415:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369556-369752:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:370391-370447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374244-374339:1:exon

position:374244:1
position: 374244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374339:1
position: 374339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:375069-375195:1:exon

position:375069:1
position: 375069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375195:1
position: 375195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:403586-403725:1:exon

ATP1B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ATP1B4
product: ATPase Na+/K+ transporting family member beta 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 175 samples with support for all annotated introns
transcript id: XM_019955739.1
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(357487..357770,361699..361957,365914..366042,366311..366415,369556..369752,370391..370447,374244..374339,375069..375195,403586..403725)
location: region:357487-403725:1
so has part: feature:357487-357770:1:exon
so has part: feature:361699-361957:1:exon
so has part: feature:365914-366042:1:exon
so has part: feature:366311-366415:1:exon
so has part: feature:369556-369752:1:exon
so has part: feature:370391-370447:1:exon
so has part: feature:374244-374339:1:exon
so has part: feature:375069-375195:1:exon
so has part: feature:403586-403725:1:exon

position:357487:1
position: 357487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357487-357770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361699-361957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365914-366042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366311-366415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369556-369752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370391-370447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374244-374339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375069-375195:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403586-403725:1:exon

ATP1B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ATP1B4
product: ATPase Na+/K+ transporting family member beta 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 175 samples with support for all annotated introns
transcript id: XM_019955741.1
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(357488..357770,361699..361945,365914..366042,366311..366415,369556..369752,370391..370447,374244..374339,375069..375195,403586..403725)
location: region:357488-403725:1
so has part: feature:357488-357770:1:exon
so has part: feature:361699-361945:1:exon
so has part: feature:365914-366042:1:exon
so has part: feature:366311-366415:1:exon
so has part: feature:369556-369752:1:exon
so has part: feature:370391-370447:1:exon
so has part: feature:374244-374339:1:exon
so has part: feature:375069-375195:1:exon
so has part: feature:403586-403725:1:exon

position:357488:1
position: 357488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357488-357770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361699-361945:1:exon

position:361945:1
position: 361945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365914-366042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366311-366415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369556-369752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370391-370447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374244-374339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375069-375195:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403586-403725:1:exon

ATP1B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ATP1B4
product: ATPase Na+/K+ transporting family member beta 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019955742.1
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(357488..357770,361699..361957,365914..366042,366311..366415,369556..369752,370391..370447,374244..374339,375069..375195,396924..396967)
location: region:357488-396967:1
so has part: feature:357488-357770:1:exon
so has part: feature:361699-361957:1:exon
so has part: feature:365914-366042:1:exon
so has part: feature:366311-366415:1:exon
so has part: feature:369556-369752:1:exon
so has part: feature:370391-370447:1:exon
so has part: feature:374244-374339:1:exon
so has part: feature:375069-375195:1:exon
so has part: feature:396924-396967:1:exon

position:396967:1
position: 396967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357488-357770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361699-361957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365914-366042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366311-366415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369556-369752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370391-370447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374244-374339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375069-375195:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:396924-396967:1:exon

position:396924:1
position: 396924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP1B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ATP1B4
product: ATPase Na+/K+ transporting family member beta 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 29 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 197 samples with support for all annotated introns
transcript id: XM_019955740.1
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(357494..357770,361699..361957,365914..366042,366311..366415,369556..369752,370391..370447,374244..374339,375069..377709)
location: region:357494-377709:1
so has part: feature:357494-357770:1:exon
so has part: feature:361699-361957:1:exon
so has part: feature:365914-366042:1:exon
so has part: feature:366311-366415:1:exon
so has part: feature:369556-369752:1:exon
so has part: feature:370391-370447:1:exon
so has part: feature:374244-374339:1:exon
so has part: feature:375069-377709:1:exon

position:357494:1
position: 357494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377709:1
position: 377709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357494-357770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361699-361957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365914-366042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366311-366415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369556-369752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370391-370447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374244-374339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375069-377709:1:exon

ATP1B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ATP1B4
product: ATPase Na+/K+ transporting family member beta 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 197 samples with support for all annotated introns
transcript id: XM_019955743.1
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(357495..357770,361699..361945,365914..366042,366311..366415,369556..369752,370391..370447,374244..374339,375069..377709)
location: region:357495-377709:1
so has part: feature:357495-357770:1:exon
so has part: feature:361699-361945:1:exon
so has part: feature:365914-366042:1:exon
so has part: feature:366311-366415:1:exon
so has part: feature:369556-369752:1:exon
so has part: feature:370391-370447:1:exon
so has part: feature:374244-374339:1:exon
so has part: feature:375069-377709:1:exon

position:357495:1
position: 357495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357495-357770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361699-361945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365914-366042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366311-366415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369556-369752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370391-370447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374244-374339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375069-377709:1:exon

ATP1B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ATP1B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ATP1B4 isoform X7
translation: MRRQLRSRRAPALPYGYRYRLDDQDEVNQNYLADEEEEAEEEARVMVVPDLEEEEEEEEEKEEEEKEEEDSHSQETDSAWWRKLQIVNEYLWDPEKRTSLARTGQSWSLILVIYFFFYASLAAVITLCMYTLFLTISPYMPTFTERVKPPGVMIRPFAHSLNFNFNVSEPDTWQHYVISLNGFLQGYNDSLQEEMNVDCPPGQYFIQDGDEDEDKKACQFKRSFLKNCSGLEDPTFGYSTGQPCILLKMNRIVGFRPERGDPVKVSCKVQDLHLRLKEVQLPMCESSRNALPPLSSLRLSEISAGWSRKKE
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(357708..357770,361699..361957,365914..366042,366311..366415,369556..369752,370391..370447,403586..403711)
location: region:357708-403711:1
so has part: feature:357708-357770:1:exon
so has part: feature:361699-361957:1:exon
so has part: feature:365914-366042:1:exon
so has part: feature:366311-366415:1:exon
so has part: feature:369556-369752:1:exon
so has part: feature:370391-370447:1:exon
so has part: feature:403586-403711:1:exon

XP_019811305.1
type: Protein
SIO_000068: ncbiprotein

position:357708:1
position: 357708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403711:1
position: 403711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357708-357770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361699-361957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365914-366042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366311-366415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369556-369752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370391-370447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:403586-403711:1:exon

ATP1B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ATP1B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ATP1B4 isoform X1
translation: MRRQLRSRRAPALPYGYRYRLDDQDEVNQNYLADEEEEAEEEARVMVVPDLEEEEEEEEEKEEEEKEEEDSHSQETDSAWWRKLQIVNEYLWDPEKRTSLARTGQSWSLILVIYFFFYASLAAVITLCMYTLFLTISPYMPTFTERVKPPGVMIRPFAHSLNFNFNVSEPDTWQHYVISLNGFLQGYNDSLQEEMNVDCPPGQYFIQDGDEDEDKKACQFKRSFLKNCSGLEDPTFGYSTGQPCILLKMNRIVGFRPERGDPVKVSCKVQRGDENDIRSINYYPESASFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVKNQAVPVQCQLKGKGIINDVINDRFVGSSSEAEGSPAPYV
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(357708..357770,361699..361957,365914..366042,366311..366415,369556..369752,370391..370447,374244..374339,375069..375195,403586..403629)
location: region:357708-403629:1
so has part: feature:357708-357770:1:exon
so has part: feature:361699-361957:1:exon
so has part: feature:365914-366042:1:exon
so has part: feature:366311-366415:1:exon
so has part: feature:369556-369752:1:exon
so has part: feature:370391-370447:1:exon
so has part: feature:374244-374339:1:exon
so has part: feature:375069-375195:1:exon
so has part: feature:403586-403629:1:exon

XP_019811298.1
type: Protein
SIO_000068: ncbiprotein

position:403629:1
position: 403629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357708-357770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361699-361957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365914-366042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366311-366415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369556-369752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370391-370447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374244-374339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375069-375195:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403586-403629:1:exon

ATP1B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ATP1B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ATP1B4 isoform X3
translation: MRRQLRSRRAPALPYGYRYRLDDQDEVNQNYLADEEEEAEEEARVMVVPDLEEEEEEEEEKEEEEKEEEDSHSQETDSAWWRKLQIVNEYLWDPEKRTSLARTGLILVIYFFFYASLAAVITLCMYTLFLTISPYMPTFTERVKPPGVMIRPFAHSLNFNFNVSEPDTWQHYVISLNGFLQGYNDSLQEEMNVDCPPGQYFIQDGDEDEDKKACQFKRSFLKNCSGLEDPTFGYSTGQPCILLKMNRIVGFRPERGDPVKVSCKVQRGDENDIRSINYYPESASFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVKNQAVPVQCQLKGKGIINDVINDRFVGSSSEAEGSPAPYV
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(357708..357770,361699..361945,365914..366042,366311..366415,369556..369752,370391..370447,374244..374339,375069..375195,403586..403629)
location: region:357708-403629:1
so has part: feature:357708-357770:1:exon
so has part: feature:361699-361945:1:exon
so has part: feature:365914-366042:1:exon
so has part: feature:366311-366415:1:exon
so has part: feature:369556-369752:1:exon
so has part: feature:370391-370447:1:exon
so has part: feature:374244-374339:1:exon
so has part: feature:375069-375195:1:exon
so has part: feature:403586-403629:1:exon

XP_019811300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357708-357770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361699-361945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365914-366042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366311-366415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369556-369752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370391-370447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374244-374339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375069-375195:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:403586-403629:1:exon

ATP1B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ATP1B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ATP1B4 isoform X4
translation: MRRQLRSRRAPALPYGYRYRLDDQDEVNQNYLADEEEEAEEEARVMVVPDLEEEEEEEEEKEEEEKEEEDSHSQETDSAWWRKLQIVNEYLWDPEKRTSLARTGQSWSLILVIYFFFYASLAAVITLCMYTLFLTISPYMPTFTERVKPPGVMIRPFAHSLNFNFNVSEPDTWQHYVISLNGFLQGYNDSLQEEMNVDCPPGQYFIQDGDEDEDKKACQFKRSFLKNCSGLEDPTFGYSTGQPCILLKMNRIVGFRPERGDPVKVSCKVQRGDENDIRSINYYPESASFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVKNQAVPVQCQLKGKGIINDVINDRFVGDLIQVLGY
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(357708..357770,361699..361957,365914..366042,366311..366415,369556..369752,370391..370447,374244..374339,375069..375195,396924..396952)
location: region:357708-396952:1
so has part: feature:357708-357770:1:exon
so has part: feature:361699-361957:1:exon
so has part: feature:365914-366042:1:exon
so has part: feature:366311-366415:1:exon
so has part: feature:369556-369752:1:exon
so has part: feature:370391-370447:1:exon
so has part: feature:374244-374339:1:exon
so has part: feature:375069-375195:1:exon
so has part: feature:396924-396952:1:exon

XP_019811301.1
type: Protein
SIO_000068: ncbiprotein

position:396952:1
position: 396952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357708-357770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361699-361957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365914-366042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366311-366415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369556-369752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370391-370447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374244-374339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375069-375195:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:396924-396952:1:exon

ATP1B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ATP1B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ATP1B4 isoform X2
translation: MRRQLRSRRAPALPYGYRYRLDDQDEVNQNYLADEEEEAEEEARVMVVPDLEEEEEEEEEKEEEEKEEEDSHSQETDSAWWRKLQIVNEYLWDPEKRTSLARTGQSWSLILVIYFFFYASLAAVITLCMYTLFLTISPYMPTFTERVKPPGVMIRPFAHSLNFNFNVSEPDTWQHYVISLNGFLQGYNDSLQEEMNVDCPPGQYFIQDGDEDEDKKACQFKRSFLKNCSGLEDPTFGYSTGQPCILLKMNRIVGFRPERGDPVKVSCKVQRGDENDIRSINYYPESASFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVKNQAVPVQCQLKGKGIINDVINDRFVGRVIFTLNIET
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(357708..357770,361699..361957,365914..366042,366311..366415,369556..369752,370391..370447,374244..374339,375069..375230)
location: region:357708-375230:1
so has part: feature:357708-357770:1:exon
so has part: feature:361699-361957:1:exon
so has part: feature:365914-366042:1:exon
so has part: feature:366311-366415:1:exon
so has part: feature:369556-369752:1:exon
so has part: feature:370391-370447:1:exon
so has part: feature:374244-374339:1:exon
so has part: feature:375069-375230:1:exon

XP_019811299.1
type: Protein
SIO_000068: ncbiprotein

position:375230:1
position: 375230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357708-357770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361699-361957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365914-366042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366311-366415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369556-369752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370391-370447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374244-374339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375069-375230:1:exon

ATP1B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ATP1B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ATP1B4 isoform X5
translation: MRRQLRSRRAPALPYGYRYRLDDQDEVNQNYLADEEEEAEEEARVMVVPDLEEEEEEEEEKEEEEKEEEDSHSQETDSAWWRKLQIVNEYLWDPEKRTSLARTGLILVIYFFFYASLAAVITLCMYTLFLTISPYMPTFTERVKPPGVMIRPFAHSLNFNFNVSEPDTWQHYVISLNGFLQGYNDSLQEEMNVDCPPGQYFIQDGDEDEDKKACQFKRSFLKNCSGLEDPTFGYSTGQPCILLKMNRIVGFRPERGDPVKVSCKVQRGDENDIRSINYYPESASFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVKNQAVPVQCQLKGKGIINDVINDRFVGRVIFTLNIET
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(357708..357770,361699..361945,365914..366042,366311..366415,369556..369752,370391..370447,374244..374339,375069..375230)
location: region:357708-375230:1
so has part: feature:357708-357770:1:exon
so has part: feature:361699-361945:1:exon
so has part: feature:365914-366042:1:exon
so has part: feature:366311-366415:1:exon
so has part: feature:369556-369752:1:exon
so has part: feature:370391-370447:1:exon
so has part: feature:374244-374339:1:exon
so has part: feature:375069-375230:1:exon

XP_019811302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357708-357770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361699-361945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365914-366042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366311-366415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369556-369752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370391-370447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374244-374339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:375069-375230:1:exon

ATP1B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ATP1B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ATP1B4 isoform X6
translation: MVVPDLEEEEEEEEEKEEEEKEEEDSHSQETDSAWWRKLQIVNEYLWDPEKRTSLARTGQSWSLILVIYFFFYASLAAVITLCMYTLFLTISPYMPTFTERVKPPGVMIRPFAHSLNFNFNVSEPDTWQHYVISLNGFLQGYNDSLQEEMNVDCPPGQYFIQDGDEDEDKKACQFKRSFLKNCSGLEDPTFGYSTGQPCILLKMNRIVGFRPERGDPVKVSCKVQRGDENDIRSINYYPESASFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVKNQAVPVQCQLKGKGIINDVINDRFVGSSSEAEGSPAPYV
SIO_010081: ATP1B4
subclass of: SO_0000673
so part of: ATP1B4
location: join(361771..361957,365914..366042,366311..366415,369556..369752,370391..370447,374244..374339,375069..375195,403586..403629)
location: region:361771-403629:1
so has part: feature:361771-361957:1:exon
so has part: feature:365914-366042:1:exon
so has part: feature:366311-366415:1:exon
so has part: feature:369556-369752:1:exon
so has part: feature:370391-370447:1:exon
so has part: feature:374244-374339:1:exon
so has part: feature:375069-375195:1:exon
so has part: feature:403586-403629:1:exon

XP_019811304.1
type: Protein
SIO_000068: ncbiprotein

position:361771:1
position: 361771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361771-361957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:365914-366042:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:366311-366415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369556-369752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370391-370447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374244-374339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375069-375195:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:403586-403629:1:exon

LAMP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(413471..450579)
location: region:413471-450579:-1
so has part: feature:413471-450579:-1:exon
subclass of: SO_0000010

109555141
type: Gene
SIO_000068: ncbigene

position:413471:-1
position: 413471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450579:-1
position: 450579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413471-450579:-1:exon

LAMP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LAMP2
product: lysosomal associated membrane protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 162 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019955733.1
SIO_010081: LAMP2
subclass of: SO_0000673
so part of: LAMP2
location: complement(join(413471..415221,426874..427038,427444..427507,431631..431753,433086..433252,434168..434326,439465..439687,440359..440477,450363..450579))
location: region:413471-450579:-1
so has part: feature:450363-450579:-1:exon
so has part: feature:440359-440477:-1:exon
so has part: feature:439465-439687:-1:exon
so has part: feature:434168-434326:-1:exon
so has part: feature:433086-433252:-1:exon
so has part: feature:431631-431753:-1:exon
so has part: feature:427444-427507:-1:exon
so has part: feature:426874-427038:-1:exon
so has part: feature:413471-415221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450363-450579:-1:exon

position:450363:-1
position: 450363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:440359-440477:-1:exon

position:440359:-1
position: 440359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440477:-1
position: 440477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:439465-439687:-1:exon

position:439465:-1
position: 439465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439687:-1
position: 439687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:434168-434326:-1:exon

position:434168:-1
position: 434168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434326:-1
position: 434326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:433086-433252:-1:exon

position:433086:-1
position: 433086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433252:-1
position: 433252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:431631-431753:-1:exon

position:431631:-1
position: 431631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431753:-1
position: 431753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:427444-427507:-1:exon

position:427444:-1
position: 427444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427507:-1
position: 427507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:426874-427038:-1:exon

position:426874:-1
position: 426874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427038:-1
position: 427038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:413471-415221:-1:exon

position:415221:-1
position: 415221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAMP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosome-associated membrane glycoprotein 2 isoform X3
translation: MTRAESAESWLLQRCGRWSSALLSGFREPFPCCRCSCRRRLLSGIMVCFRLAPVPGSGFLLLCLVLGAVSSYALELNLTDSSNATCLYAKWQMNFTIRYETTDKHNKTVPISDLGAATYNGSFCGDDQNGPKIAVQFGSGFSWIVNFTKEAASPSTYLVDTISFSYNTNDNKTFPDAKEKEVFTVNNRVALKIPLNDIFRCNSLSTLENRDVVQHYWDVHVQAFVQNGTVSTTEFLCDKDKTVTTAVPIVPTTLPSPTKPVVGSYSVVNSNGTCLLATMGLQLNITHDKVASVFNINPNTTNATGSCQPQTALLRLSSSNIKYLDFVFAVKNENRFYLKEVNVSMILVNGSVYSISNTNLSYWDAPLGSSYMCNKEQTVSVSGAFQINTFDLRVQPFSVTEGKYSTAEECSADSDLNFLIPVAVGVALGFLIIVVFISYMIGRRKSRTGYQSV
SIO_010081: LAMP2
subclass of: SO_0000673
so part of: LAMP2
location: complement(join(415079..415221,426874..427038,427444..427507,431631..431753,433086..433252,434168..434326,439465..439687,440359..440477,450363..450561))
location: region:415079-450561:-1
so has part: feature:450363-450561:-1:exon
so has part: feature:440359-440477:-1:exon
so has part: feature:439465-439687:-1:exon
so has part: feature:434168-434326:-1:exon
so has part: feature:433086-433252:-1:exon
so has part: feature:431631-431753:-1:exon
so has part: feature:427444-427507:-1:exon
so has part: feature:426874-427038:-1:exon
so has part: feature:415079-415221:-1:exon

XP_019811292.1
type: Protein
SIO_000068: ncbiprotein

position:415079:-1
position: 415079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450561:-1
position: 450561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450363-450561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440359-440477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439465-439687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434168-434326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433086-433252:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431631-431753:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427444-427507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:426874-427038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:415079-415221:-1:exon

LAMP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LAMP2
product: lysosomal associated membrane protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 228 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 158 samples with support for all annotated introns
transcript id: XM_019955730.1
SIO_010081: LAMP2
subclass of: SO_0000673
so part of: LAMP2
location: complement(join(417452..417965,426874..427038,427444..427507,431631..431753,433086..433252,434168..434326,439465..439687,440359..440477,450363..450579))
location: region:417452-450579:-1
so has part: feature:450363-450579:-1:exon
so has part: feature:440359-440477:-1:exon
so has part: feature:439465-439687:-1:exon
so has part: feature:434168-434326:-1:exon
so has part: feature:433086-433252:-1:exon
so has part: feature:431631-431753:-1:exon
so has part: feature:427444-427507:-1:exon
so has part: feature:426874-427038:-1:exon
so has part: feature:417452-417965:-1:exon

position:417452:-1
position: 417452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450363-450579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440359-440477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439465-439687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434168-434326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433086-433252:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431631-431753:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427444-427507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:426874-427038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417452-417965:-1:exon

position:417965:-1
position: 417965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAMP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosome-associated membrane glycoprotein 2 isoform X1
translation: MTRAESAESWLLQRCGRWSSALLSGFREPFPCCRCSCRRRLLSGIMVCFRLAPVPGSGFLLLCLVLGAVSSYALELNLTDSSNATCLYAKWQMNFTIRYETTDKHNKTVPISDLGAATYNGSFCGDDQNGPKIAVQFGSGFSWIVNFTKEAASPSTYLVDTISFSYNTNDNKTFPDAKEKEVFTVNNRVALKIPLNDIFRCNSLSTLENRDVVQHYWDVHVQAFVQNGTVSTTEFLCDKDKTVTTAVPIVPTTLPSPTKPVVGSYSVVNSNGTCLLATMGLQLNITHDKVASVFNINPNTTNATGSCQPQTALLRLSSSNIKYLDFVFAVKNENRFYLKEVNVSMILVNGSVYSISNTNLSYWDAPLGSSYMCNKEQTVSVSGAFQINTFDLRVQPFSVTEGKYSTAQDCSADDDNFLVPIAVGAALAGVLILVLLAYFIGLKRHHAGYEQF
SIO_010081: LAMP2
subclass of: SO_0000673
so part of: LAMP2
location: complement(join(417826..417965,426874..427038,427444..427507,431631..431753,433086..433252,434168..434326,439465..439687,440359..440477,450363..450561))
location: region:417826-450561:-1
so has part: feature:450363-450561:-1:exon
so has part: feature:440359-440477:-1:exon
so has part: feature:439465-439687:-1:exon
so has part: feature:434168-434326:-1:exon
so has part: feature:433086-433252:-1:exon
so has part: feature:431631-431753:-1:exon
so has part: feature:427444-427507:-1:exon
so has part: feature:426874-427038:-1:exon
so has part: feature:417826-417965:-1:exon

XP_019811289.1
type: Protein
SIO_000068: ncbiprotein

position:417826:-1
position: 417826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450363-450561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440359-440477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439465-439687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434168-434326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433086-433252:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431631-431753:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427444-427507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:426874-427038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417826-417965:-1:exon

LAMP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LAMP2
product: lysosomal associated membrane protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 239 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 263 samples with support for all annotated introns
transcript id: XM_019955732.1
SIO_010081: LAMP2
subclass of: SO_0000673
so part of: LAMP2
location: complement(join(422234..424246,426874..427038,427444..427507,431631..431753,433086..433252,434168..434326,439465..439687,440359..440477,450363..450579))
location: region:422234-450579:-1
so has part: feature:450363-450579:-1:exon
so has part: feature:440359-440477:-1:exon
so has part: feature:439465-439687:-1:exon
so has part: feature:434168-434326:-1:exon
so has part: feature:433086-433252:-1:exon
so has part: feature:431631-431753:-1:exon
so has part: feature:427444-427507:-1:exon
so has part: feature:426874-427038:-1:exon
so has part: feature:422234-424246:-1:exon

position:422234:-1
position: 422234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450363-450579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440359-440477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439465-439687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434168-434326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433086-433252:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431631-431753:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427444-427507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:426874-427038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:422234-424246:-1:exon

position:424246:-1
position: 424246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAMP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosome-associated membrane glycoprotein 2 isoform X2
translation: MTRAESAESWLLQRCGRWSSALLSGFREPFPCCRCSCRRRLLSGIMVCFRLAPVPGSGFLLLCLVLGAVSSYALELNLTDSSNATCLYAKWQMNFTIRYETTDKHNKTVPISDLGAATYNGSFCGDDQNGPKIAVQFGSGFSWIVNFTKEAASPSTYLVDTISFSYNTNDNKTFPDAKEKEVFTVNNRVALKIPLNDIFRCNSLSTLENRDVVQHYWDVHVQAFVQNGTVSTTEFLCDKDKTVTTAVPIVPTTLPSPTKPVVGSYSVVNSNGTCLLATMGLQLNITHDKVASVFNINPNTTNATGSCQPQTALLRLSSSNIKYLDFVFAVKNENRFYLKEVNVSMILVNGSVYSISNTNLSYWDAPLGSSYMCNKEQTVSVSGAFQINTFDLRVQPFSVTEGKYSTAQECSLDDDTILIPIIVGAGLSGLIIVIVIAYLIGRRKSYAGYQTL
SIO_010081: LAMP2
subclass of: SO_0000673
so part of: LAMP2
location: complement(join(424107..424246,426874..427038,427444..427507,431631..431753,433086..433252,434168..434326,439465..439687,440359..440477,450363..450561))
location: region:424107-450561:-1
so has part: feature:450363-450561:-1:exon
so has part: feature:440359-440477:-1:exon
so has part: feature:439465-439687:-1:exon
so has part: feature:434168-434326:-1:exon
so has part: feature:433086-433252:-1:exon
so has part: feature:431631-431753:-1:exon
so has part: feature:427444-427507:-1:exon
so has part: feature:426874-427038:-1:exon
so has part: feature:424107-424246:-1:exon

XP_019811291.1
type: Protein
SIO_000068: ncbiprotein

position:424107:-1
position: 424107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450363-450561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440359-440477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439465-439687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434168-434326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433086-433252:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431631-431753:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427444-427507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:426874-427038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:424107-424246:-1:exon

CUL4B
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CUL4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(511416..544458)
location: region:511416-544458:-1
so has part: feature:511416-544458:-1:exon
subclass of: SO_0000010

109555249
type: Gene
SIO_000068: ncbigene

position:511416:-1
position: 511416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544458:-1
position: 544458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511416-544458:-1:exon

CUL4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CUL4B
product: cullin 4B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 ESTs, 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019955966.1
SIO_010081: CUL4B
subclass of: SO_0000673
so part of: CUL4B
location: complement(join(511416..513811,515782..515934,518000..518172,519135..519240,519918..520031,520832..520939,522692..522777,523234..523344,523835..523939,524994..525186,525791..525909,527378..527445,528071..528153,528393..528482,528761..528924,529839..529911,530704..530773,531358..531461,540558..540673,542724..543269,544416..544458))
location: region:511416-544458:-1
so has part: feature:544416-544458:-1:exon
so has part: feature:542724-543269:-1:exon
so has part: feature:540558-540673:-1:exon
so has part: feature:531358-531461:-1:exon
so has part: feature:530704-530773:-1:exon
so has part: feature:529839-529911:-1:exon
so has part: feature:528761-528924:-1:exon
so has part: feature:528393-528482:-1:exon
so has part: feature:528071-528153:-1:exon
so has part: feature:527378-527445:-1:exon
so has part: feature:525791-525909:-1:exon
so has part: feature:524994-525186:-1:exon
so has part: feature:523835-523939:-1:exon
so has part: feature:523234-523344:-1:exon
so has part: feature:522692-522777:-1:exon
so has part: feature:520832-520939:-1:exon
so has part: feature:519918-520031:-1:exon
so has part: feature:519135-519240:-1:exon
so has part: feature:518000-518172:-1:exon
so has part: feature:515782-515934:-1:exon
so has part: feature:511416-513811:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544416-544458:-1:exon

position:544416:-1
position: 544416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:542724-543269:-1:exon

position:542724:-1
position: 542724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543269:-1
position: 543269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:540558-540673:-1:exon

position:540558:-1
position: 540558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540673:-1
position: 540673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:531358-531461:-1:exon

position:531358:-1
position: 531358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531461:-1
position: 531461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:530704-530773:-1:exon

position:530704:-1
position: 530704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530773:-1
position: 530773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:529839-529911:-1:exon

position:529839:-1
position: 529839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529911:-1
position: 529911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:528761-528924:-1:exon

position:528761:-1
position: 528761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528924:-1
position: 528924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:528393-528482:-1:exon

position:528393:-1
position: 528393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528482:-1
position: 528482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:528071-528153:-1:exon

position:528071:-1
position: 528071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528153:-1
position: 528153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:527378-527445:-1:exon

position:527378:-1
position: 527378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527445:-1
position: 527445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:525791-525909:-1:exon

position:525791:-1
position: 525791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525909:-1
position: 525909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:524994-525186:-1:exon

position:524994:-1
position: 524994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525186:-1
position: 525186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:523835-523939:-1:exon

position:523835:-1
position: 523835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523939:-1
position: 523939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:523234-523344:-1:exon

position:523234:-1
position: 523234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523344:-1
position: 523344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:522692-522777:-1:exon

position:522692:-1
position: 522692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522777:-1
position: 522777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:520832-520939:-1:exon

position:520832:-1
position: 520832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520939:-1
position: 520939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:519918-520031:-1:exon

position:519918:-1
position: 519918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520031:-1
position: 520031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:519135-519240:-1:exon

position:519135:-1
position: 519135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519240:-1
position: 519240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:518000-518172:-1:exon

position:518000:-1
position: 518000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518172:-1
position: 518172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:515782-515934:-1:exon

position:515782:-1
position: 515782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515934:-1
position: 515934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:511416-513811:-1:exon

position:513811:-1
position: 513811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CUL4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CUL4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cullin-4B
translation: MKSVCPVTSGFSSPNPSAAAAAQEVRSATDGNTSTTPPTSAKKRKLNSSSSSSGSNSSNEREDFDSTSSSSSTPPLQPRDSASPSTSSFSCLGVPVTAPSHVPIQKKLRFEENLEFVGFDAKMAEESSSSSSSSPTAATSQQQQLKNKSILISTVASVHHANGLAKSSTTVSSFANSKPGSAKKLVIKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPCHWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA
SIO_010081: CUL4B
subclass of: SO_0000673
so part of: CUL4B
location: complement(join(513716..513811,515782..515934,518000..518172,519135..519240,519918..520031,520832..520939,522692..522777,523234..523344,523835..523939,524994..525186,525791..525909,527378..527445,528071..528153,528393..528482,528761..528924,529839..529911,530704..530773,531358..531461,540558..540673,542724..543269,544416..544443))
location: region:513716-544443:-1
so has part: feature:544416-544443:-1:exon
so has part: feature:542724-543269:-1:exon
so has part: feature:540558-540673:-1:exon
so has part: feature:531358-531461:-1:exon
so has part: feature:530704-530773:-1:exon
so has part: feature:529839-529911:-1:exon
so has part: feature:528761-528924:-1:exon
so has part: feature:528393-528482:-1:exon
so has part: feature:528071-528153:-1:exon
so has part: feature:527378-527445:-1:exon
so has part: feature:525791-525909:-1:exon
so has part: feature:524994-525186:-1:exon
so has part: feature:523835-523939:-1:exon
so has part: feature:523234-523344:-1:exon
so has part: feature:522692-522777:-1:exon
so has part: feature:520832-520939:-1:exon
so has part: feature:519918-520031:-1:exon
so has part: feature:519135-519240:-1:exon
so has part: feature:518000-518172:-1:exon
so has part: feature:515782-515934:-1:exon
so has part: feature:513716-513811:-1:exon

XP_019811525.1
type: Protein
SIO_000068: ncbiprotein

position:513716:-1
position: 513716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544443:-1
position: 544443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544416-544443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542724-543269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540558-540673:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531358-531461:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:530704-530773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529839-529911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:528761-528924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:528393-528482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528071-528153:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527378-527445:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525791-525909:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524994-525186:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:523835-523939:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:523234-523344:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:522692-522777:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:520832-520939:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:519918-520031:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:519135-519240:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:518000-518172:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:515782-515934:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:513716-513811:-1:exon

LOC109555248
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 561608..562467
location: region:561608-562467:1
so has part: feature:561608-562467:1:exon

109555248
type: Gene
SIO_000068: ncbigene

position:561608:1
position: 561608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562467:1
position: 562467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561608-562467:1:exon

LOC109555248
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109555248
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109555248
subclass of: SO_0000673
so part of: LOC109555248
location: 561608..562467
location: region:561608-562467:1
so has part: feature:561608-562467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:561608-562467:1:exon

MCTS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: MCTS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 577659..586255
location: region:577659-586255:1
so has part: feature:577659-586255:1:exon
subclass of: SO_0000010

109555426
type: Gene
SIO_000068: ncbigene

position:577659:1
position: 577659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586255:1
position: 586255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577659-586255:1:exon

MCTS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MCTS1
product: MCTS1, re-initiation and release factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_019956294.1
SIO_010081: MCTS1
subclass of: SO_0000673
so part of: MCTS1
location: join(577659..577799,578463..578743,579897..580088,580624..580721,582376..582509,584461..584528,586040..586255)
location: region:577659-586255:1
so has part: feature:577659-577799:1:exon
so has part: feature:578463-578743:1:exon
so has part: feature:579897-580088:1:exon
so has part: feature:580624-580721:1:exon
so has part: feature:582376-582509:1:exon
so has part: feature:584461-584528:1:exon
so has part: feature:586040-586255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:577659-577799:1:exon

position:577799:1
position: 577799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:578463-578743:1:exon

position:578463:1
position: 578463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578743:1
position: 578743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:579897-580088:1:exon

position:579897:1
position: 579897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580088:1
position: 580088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:580624-580721:1:exon

position:580624:1
position: 580624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580721:1
position: 580721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:582376-582509:1:exon

position:582376:1
position: 582376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582509:1
position: 582509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:584461-584528:1:exon

position:584461:1
position: 584461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584528:1
position: 584528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:586040-586255:1:exon

position:586040:1
position: 586040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCTS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MCTS1
product: MCTS1, re-initiation and release factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 39 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 256 samples with support for all annotated introns
transcript id: XM_019956297.1
SIO_010081: MCTS1
subclass of: SO_0000673
so part of: MCTS1
location: join(578381..578743,579936..580088,580624..580721,582376..582509,584461..584528,586040..586255)
location: region:578381-586255:1
so has part: feature:578381-578743:1:exon
so has part: feature:579936-580088:1:exon
so has part: feature:580624-580721:1:exon
so has part: feature:582376-582509:1:exon
so has part: feature:584461-584528:1:exon
so has part: feature:586040-586255:1:exon

position:578381:1
position: 578381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578381-578743:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579936-580088:1:exon

position:579936:1
position: 579936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:580624-580721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582376-582509:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584461-584528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:586040-586255:1:exon

MCTS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MCTS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: malignant T-cell-amplified sequence 1 isoform X2
translation: MFKKNAFCFSLQKSFGRFDEKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWXMKTYK
SIO_010081: MCTS1
subclass of: SO_0000673
so part of: MCTS1
location: join(578733..578743,579897..580088,580624..580721,582376..582509,584461..584528,586040..586121)
location: region:578733-586121:1
so has part: feature:578733-578743:1:exon
so has part: feature:579897-580088:1:exon
so has part: feature:580624-580721:1:exon
so has part: feature:582376-582509:1:exon
so has part: feature:584461-584528:1:exon
so has part: feature:586040-586121:1:exon

XP_019811853.1
type: Protein
SIO_000068: ncbiprotein

position:578733:1
position: 578733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586121:1
position: 586121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578733-578743:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579897-580088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580624-580721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582376-582509:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584461-584528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:586040-586121:1:exon

MCTS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MCTS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: malignant T-cell-amplified sequence 1 isoform X4
translation: MFKKFDEKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWXMKTYK
SIO_010081: MCTS1
subclass of: SO_0000673
so part of: MCTS1
location: join(578733..578743,579936..580088,580624..580721,582376..582509,584461..584528,586040..586121)
location: region:578733-586121:1
so has part: feature:578733-578743:1:exon
so has part: feature:579936-580088:1:exon
so has part: feature:580624-580721:1:exon
so has part: feature:582376-582509:1:exon
so has part: feature:584461-584528:1:exon
so has part: feature:586040-586121:1:exon

XP_019811856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578733-578743:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579936-580088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580624-580721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582376-582509:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584461-584528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:586040-586121:1:exon

MCTS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MCTS1
product: MCTS1, re-initiation and release factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_019956293.1
SIO_010081: MCTS1
subclass of: SO_0000673
so part of: MCTS1
location: join(578805..579387,579897..580088,580624..580721,582376..582509,584461..584528,586040..586255)
location: region:578805-586255:1
so has part: feature:578805-579387:1:exon
so has part: feature:579897-580088:1:exon
so has part: feature:580624-580721:1:exon
so has part: feature:582376-582509:1:exon
so has part: feature:584461-584528:1:exon
so has part: feature:586040-586255:1:exon

position:578805:1
position: 578805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578805-579387:1:exon

position:579387:1
position: 579387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:579897-580088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580624-580721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582376-582509:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584461-584528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:586040-586255:1:exon

MCTS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MCTS1
product: MCTS1, re-initiation and release factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 28 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 245 samples with support for all annotated introns
transcript id: XM_019956295.1
SIO_010081: MCTS1
subclass of: SO_0000673
so part of: MCTS1
location: join(578811..579387,579936..580088,580624..580721,582376..582509,584461..584528,586040..586255)
location: region:578811-586255:1
so has part: feature:578811-579387:1:exon
so has part: feature:579936-580088:1:exon
so has part: feature:580624-580721:1:exon
so has part: feature:582376-582509:1:exon
so has part: feature:584461-584528:1:exon
so has part: feature:586040-586255:1:exon

position:578811:1
position: 578811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578811-579387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579936-580088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580624-580721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582376-582509:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584461-584528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:586040-586255:1:exon

MCTS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MCTS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: malignant T-cell-amplified sequence 1 isoform X1
translation: MGKGRNAFCFSLQKSFGRFDEKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWXMKTYK
SIO_010081: MCTS1
subclass of: SO_0000673
so part of: MCTS1
location: join(579374..579387,579897..580088,580624..580721,582376..582509,584461..584528,586040..586121)
location: region:579374-586121:1
so has part: feature:579374-579387:1:exon
so has part: feature:579897-580088:1:exon
so has part: feature:580624-580721:1:exon
so has part: feature:582376-582509:1:exon
so has part: feature:584461-584528:1:exon
so has part: feature:586040-586121:1:exon

XP_019811852.1
type: Protein
SIO_000068: ncbiprotein

position:579374:1
position: 579374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579374-579387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579897-580088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580624-580721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582376-582509:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584461-584528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:586040-586121:1:exon

MCTS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MCTS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: malignant T-cell-amplified sequence 1 isoform X3
translation: MGKGRFDEKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWXMKTYK
SIO_010081: MCTS1
subclass of: SO_0000673
so part of: MCTS1
location: join(579374..579387,579936..580088,580624..580721,582376..582509,584461..584528,586040..586121)
location: region:579374-586121:1
so has part: feature:579374-579387:1:exon
so has part: feature:579936-580088:1:exon
so has part: feature:580624-580721:1:exon
so has part: feature:582376-582509:1:exon
so has part: feature:584461-584528:1:exon
so has part: feature:586040-586121:1:exon

XP_019811854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:579374-579387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579936-580088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580624-580721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582376-582509:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584461-584528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:586040-586121:1:exon

C1GALT1C1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: C1GALT1C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(598662..602493)
location: region:598662-602493:-1
so has part: feature:598662-602493:-1:exon
subclass of: SO_0000010

109555431
type: Gene
SIO_000068: ncbigene

position:598662:-1
position: 598662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602493:-1
position: 602493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598662-602493:-1:exon

C1GALT1C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: C1GALT1C1
product: C1GALT1 specific chaperone 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 34 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 257 samples with support for all annotated introns
transcript id: XM_019956316.1
SIO_010081: C1GALT1C1
subclass of: SO_0000673
so part of: C1GALT1C1
location: complement(join(598662..600380,601789..602493))
location: region:598662-602493:-1
so has part: feature:601789-602493:-1:exon
so has part: feature:598662-600380:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:601789-602493:-1:exon

position:601789:-1
position: 601789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:598662-600380:-1:exon

position:600380:-1
position: 600380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C1GALT1C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: C1GALT1C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C1GALT1-specific chaperone 1
translation: MLSESSSFLKGVMLGSIFCALVTMLGHIRIGHGSRMHHHEHHHLQAPNKEDILKISEDERXELSKSFRVYCILLVRPKDVSLXAAVKETWTNHCDKVDFFSSENVKVFESXNMETNDMWLMMRKAYKYAFDKYRDQYNWFFLAXPTTFAIIENLKYFLLKKDPSQPFYLGHTVKSGDLEYVSMEGGIVLSIESMKRLNSLLSIPEKCPEQGGMIWKISEDKQLAVCLKYAGVFAENAEDSXGKDIFNTKSVGLFIKEAMTNHPNQVVEGCCSDMAVTFNGLTPNQMHVMMYGVYRLRAFGHVFNDXLVFLPPNGSDND
SIO_010081: C1GALT1C1
subclass of: SO_0000673
so part of: C1GALT1C1
location: complement(599419..600375)
location: region:599419-600375:-1
so has part: feature:599419-600375:-1:exon

XP_019811875.1
type: Protein
SIO_000068: ncbiprotein

position:599419:-1
position: 599419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600375:-1
position: 600375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599419-600375:-1:exon

LOC109554753
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1245546..1366084
location: region:1245546-1366084:1
so has part: feature:1245546-1366084:1:exon

109554753
type: Gene
SIO_000068: ncbigene

position:1245546:1
position: 1245546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1366084:1
position: 1366084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1245546-1366084:1:exon

LOC109554753
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC109554753
subclass of: SO_0000673
so part of: LOC109554753
location: 1245546..1245628
location: region:1245546-1245628:1
so has part: feature:1245546-1245628:1:exon

position:1245628:1
position: 1245628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1245546-1245628:1:exon

LOC109554753
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC109554753
subclass of: SO_0000673
so part of: LOC109554753
location: 1245851..1245967
location: region:1245851-1245967:1
so has part: feature:1245851-1245967:1:exon

position:1245851:1
position: 1245851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245967:1
position: 1245967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1245851-1245967:1:exon

LOC109554753
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC109554753
subclass of: SO_0000673
so part of: LOC109554753
location: 1246386..1247179
location: region:1246386-1247179:1
so has part: feature:1246386-1247179:1:exon

position:1246386:1
position: 1246386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247179:1
position: 1247179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246386-1247179:1:exon

LOC109554753
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC109554753
subclass of: SO_0000673
so part of: LOC109554753
location: 1247693..1247714
location: region:1247693-1247714:1
so has part: feature:1247693-1247714:1:exon

position:1247693:1
position: 1247693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247714:1
position: 1247714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1247693-1247714:1:exon

LOC109554753
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC109554753
subclass of: SO_0000673
so part of: LOC109554753
location: 1351912..1352014
location: region:1351912-1352014:1
so has part: feature:1351912-1352014:1:exon

position:1351912:1
position: 1351912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352014:1
position: 1352014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1351912-1352014:1:exon

LOC109554753
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC109554753
subclass of: SO_0000673
so part of: LOC109554753
location: 1362227..1362326
location: region:1362227-1362326:1
so has part: feature:1362227-1362326:1:exon

position:1362227:1
position: 1362227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362326:1
position: 1362326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1362227-1362326:1:exon

LOC109554753
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC109554753
subclass of: SO_0000673
so part of: LOC109554753
location: 1365988..1366084
location: region:1365988-1366084:1
so has part: feature:1365988-1366084:1:exon

position:1365988:1
position: 1365988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365988-1366084:1:exon

GRIA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: GRIA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2326990..2635366
location: region:2326990-2635366:1
so has part: feature:2326990-2635366:1:exon
subclass of: SO_0000010

109555352
type: Gene
SIO_000068: ncbigene

position:2326990:1
position: 2326990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2635366:1
position: 2635366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2326990-2635366:1:exon

GRIA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: GRIA3
product: glutamate ionotropic receptor AMPA type subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 24 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019956167.1
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(2326990..2327292,2327524..2327650,2328820..2328978,2405545..2405784,2480032..2480219,2514292..2514345,2533456..2533617,2537688..2537855,2542611..2542715,2543830..2543937,2545302..2545508,2557161..2557537,2568642..2568840,2610339..2610586,2625167..2625281,2627895..2628142,2633148..2635366)
location: region:2326990-2635366:1
so has part: feature:2326990-2327292:1:exon
so has part: feature:2327524-2327650:1:exon
so has part: feature:2328820-2328978:1:exon
so has part: feature:2405545-2405784:1:exon
so has part: feature:2480032-2480219:1:exon
so has part: feature:2514292-2514345:1:exon
so has part: feature:2533456-2533617:1:exon
so has part: feature:2537688-2537855:1:exon
so has part: feature:2542611-2542715:1:exon
so has part: feature:2543830-2543937:1:exon
so has part: feature:2545302-2545508:1:exon
so has part: feature:2557161-2557537:1:exon
so has part: feature:2568642-2568840:1:exon
so has part: feature:2610339-2610586:1:exon
so has part: feature:2625167-2625281:1:exon
so has part: feature:2627895-2628142:1:exon
so has part: feature:2633148-2635366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2326990-2327292:1:exon

position:2327292:1
position: 2327292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2327524-2327650:1:exon

position:2327524:1
position: 2327524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2327650:1
position: 2327650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2328820-2328978:1:exon

position:2328820:1
position: 2328820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2328978:1
position: 2328978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2405545-2405784:1:exon

position:2405545:1
position: 2405545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2405784:1
position: 2405784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2480032-2480219:1:exon

position:2480032:1
position: 2480032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2480219:1
position: 2480219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2514292-2514345:1:exon

position:2514292:1
position: 2514292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514345:1
position: 2514345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2533456-2533617:1:exon

position:2533456:1
position: 2533456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2533617:1
position: 2533617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2537688-2537855:1:exon

position:2537688:1
position: 2537688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2537855:1
position: 2537855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2542611-2542715:1:exon

position:2542611:1
position: 2542611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2542715:1
position: 2542715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2543830-2543937:1:exon

position:2543830:1
position: 2543830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2543937:1
position: 2543937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2545302-2545508:1:exon

position:2545302:1
position: 2545302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2545508:1
position: 2545508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2557161-2557537:1:exon

position:2557161:1
position: 2557161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2557537:1
position: 2557537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2568642-2568840:1:exon

position:2568642:1
position: 2568642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2568840:1
position: 2568840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2610339-2610586:1:exon

position:2610339:1
position: 2610339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2610586:1
position: 2610586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2625167-2625281:1:exon

position:2625167:1
position: 2625167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2625281:1
position: 2625281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2627895-2628142:1:exon

position:2627895:1
position: 2627895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2628142:1
position: 2628142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2633148-2635366:1:exon

position:2633148:1
position: 2633148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRIA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: GRIA3
product: glutamate ionotropic receptor AMPA type subunit 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 24 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019956168.1
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(2326990..2327287,2327524..2327650,2328820..2328978,2405545..2405784,2480032..2480219,2514292..2514345,2533456..2533617,2537688..2537855,2542611..2542715,2543830..2543937,2545302..2545508,2557161..2557537,2568642..2568840,2610339..2610586,2625167..2625281,2627895..2628142,2633148..2635366)
location: region:2326990-2635366:1
so has part: feature:2326990-2327287:1:exon
so has part: feature:2327524-2327650:1:exon
so has part: feature:2328820-2328978:1:exon
so has part: feature:2405545-2405784:1:exon
so has part: feature:2480032-2480219:1:exon
so has part: feature:2514292-2514345:1:exon
so has part: feature:2533456-2533617:1:exon
so has part: feature:2537688-2537855:1:exon
so has part: feature:2542611-2542715:1:exon
so has part: feature:2543830-2543937:1:exon
so has part: feature:2545302-2545508:1:exon
so has part: feature:2557161-2557537:1:exon
so has part: feature:2568642-2568840:1:exon
so has part: feature:2610339-2610586:1:exon
so has part: feature:2625167-2625281:1:exon
so has part: feature:2627895-2628142:1:exon
so has part: feature:2633148-2635366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2326990-2327287:1:exon

position:2327287:1
position: 2327287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2327524-2327650:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2328820-2328978:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2405545-2405784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2480032-2480219:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2514292-2514345:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2533456-2533617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2537688-2537855:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2542611-2542715:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2543830-2543937:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2545302-2545508:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2557161-2557537:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2568642-2568840:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2610339-2610586:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2625167-2625281:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2627895-2628142:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2633148-2635366:1:exon

GRIA3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: GRIA3
product: glutamate ionotropic receptor AMPA type subunit 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 23 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002180259.1
SIO_010081: GRIA3
so part of: GRIA3
location: join(2327321..2327650,2328820..2328978,2405545..2405784,2480032..2480219,2514292..2514345,2533456..2533617,2537688..2537855,2542611..2542715,2543830..2543937,2545302..2545508,2557161..2557537,2568642..2568840,2610339..2610586,2611152..2611266,2625167..2625281,2627895..2628142,2633148..2635366)
location: region:2327321-2635366:1
so has part: feature:2327321-2327650:1:exon
so has part: feature:2328820-2328978:1:exon
so has part: feature:2405545-2405784:1:exon
so has part: feature:2480032-2480219:1:exon
so has part: feature:2514292-2514345:1:exon
so has part: feature:2533456-2533617:1:exon
so has part: feature:2537688-2537855:1:exon
so has part: feature:2542611-2542715:1:exon
so has part: feature:2543830-2543937:1:exon
so has part: feature:2545302-2545508:1:exon
so has part: feature:2557161-2557537:1:exon
so has part: feature:2568642-2568840:1:exon
so has part: feature:2610339-2610586:1:exon
so has part: feature:2611152-2611266:1:exon
so has part: feature:2625167-2625281:1:exon
so has part: feature:2627895-2628142:1:exon
so has part: feature:2633148-2635366:1:exon

position:2327321:1
position: 2327321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2327321-2327650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2328820-2328978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2405545-2405784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2480032-2480219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2514292-2514345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2533456-2533617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2537688-2537855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2542611-2542715:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2543830-2543937:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2545302-2545508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2557161-2557537:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2568642-2568840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2610339-2610586:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2611152-2611266:1:exon

position:2611152:1
position: 2611152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2611266:1
position: 2611266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2625167-2625281:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2627895-2628142:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2633148-2635366:1:exon

GRIA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: GRIA3
product: glutamate ionotropic receptor AMPA type subunit 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 17 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019956169.1
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(2327321..2327650,2328820..2328978,2405545..2405784,2480032..2480219,2514292..2514345,2533456..2533617,2537688..2537855,2542611..2542715,2543830..2543937,2545302..2545508,2557161..2557537,2568642..2568840,2610339..2610586,2611152..2611266,2627895..2628142,2633148..2635366)
location: region:2327321-2635366:1
so has part: feature:2327321-2327650:1:exon
so has part: feature:2328820-2328978:1:exon
so has part: feature:2405545-2405784:1:exon
so has part: feature:2480032-2480219:1:exon
so has part: feature:2514292-2514345:1:exon
so has part: feature:2533456-2533617:1:exon
so has part: feature:2537688-2537855:1:exon
so has part: feature:2542611-2542715:1:exon
so has part: feature:2543830-2543937:1:exon
so has part: feature:2545302-2545508:1:exon
so has part: feature:2557161-2557537:1:exon
so has part: feature:2568642-2568840:1:exon
so has part: feature:2610339-2610586:1:exon
so has part: feature:2611152-2611266:1:exon
so has part: feature:2627895-2628142:1:exon
so has part: feature:2633148-2635366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2327321-2327650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2328820-2328978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2405545-2405784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2480032-2480219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2514292-2514345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2533456-2533617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2537688-2537855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2542611-2542715:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2543830-2543937:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2545302-2545508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2557161-2557537:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2568642-2568840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2610339-2610586:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2611152-2611266:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2627895-2628142:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2633148-2635366:1:exon

GRIA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: GRIA3
product: glutamate ionotropic receptor AMPA type subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 25 ESTs, 24 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019956166.1
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(2327321..2327650,2328820..2328978,2405545..2405784,2480032..2480219,2514292..2514345,2533456..2533617,2537688..2537855,2542611..2542715,2543830..2543937,2545302..2545508,2557161..2557537,2568642..2568840,2610339..2610586,2625167..2625281,2627895..2628142,2633148..2635366)
location: region:2327321-2635366:1
so has part: feature:2327321-2327650:1:exon
so has part: feature:2328820-2328978:1:exon
so has part: feature:2405545-2405784:1:exon
so has part: feature:2480032-2480219:1:exon
so has part: feature:2514292-2514345:1:exon
so has part: feature:2533456-2533617:1:exon
so has part: feature:2537688-2537855:1:exon
so has part: feature:2542611-2542715:1:exon
so has part: feature:2543830-2543937:1:exon
so has part: feature:2545302-2545508:1:exon
so has part: feature:2557161-2557537:1:exon
so has part: feature:2568642-2568840:1:exon
so has part: feature:2610339-2610586:1:exon
so has part: feature:2625167-2625281:1:exon
so has part: feature:2627895-2628142:1:exon
so has part: feature:2633148-2635366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2327321-2327650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2328820-2328978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2405545-2405784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2480032-2480219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2514292-2514345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2533456-2533617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2537688-2537855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2542611-2542715:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2543830-2543937:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2545302-2545508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2557161-2557537:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2568642-2568840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2610339-2610586:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2625167-2625281:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2627895-2628142:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2633148-2635366:1:exon

GRIA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: GRIA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 3 isoform X2
translation: MARQKKMGQSVLRAVFFLVLGLLGHSHGGFPNTISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFDTYGRRTNYTIDVYEMKVTGSRKAGYWNEYERFVPFSDQQISNDSASAENRTIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMKLTKNTQNFKPAPATNTQNYATYREGYNVYGTESVKI
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(2327542..2327650,2328820..2328978,2405545..2405784,2480032..2480219,2514292..2514345,2533456..2533617,2537688..2537855,2542611..2542715,2543830..2543937,2545302..2545508,2557161..2557537,2568642..2568840,2610339..2610586,2611152..2611266,2627895..2628140)
location: region:2327542-2628140:1
so has part: feature:2327542-2327650:1:exon
so has part: feature:2328820-2328978:1:exon
so has part: feature:2405545-2405784:1:exon
so has part: feature:2480032-2480219:1:exon
so has part: feature:2514292-2514345:1:exon
so has part: feature:2533456-2533617:1:exon
so has part: feature:2537688-2537855:1:exon
so has part: feature:2542611-2542715:1:exon
so has part: feature:2543830-2543937:1:exon
so has part: feature:2545302-2545508:1:exon
so has part: feature:2557161-2557537:1:exon
so has part: feature:2568642-2568840:1:exon
so has part: feature:2610339-2610586:1:exon
so has part: feature:2611152-2611266:1:exon
so has part: feature:2627895-2628140:1:exon

XP_019811728.1
type: Protein
SIO_000068: ncbiprotein

position:2327542:1
position: 2327542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2628140:1
position: 2628140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2327542-2327650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2328820-2328978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2405545-2405784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2480032-2480219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2514292-2514345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2533456-2533617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2537688-2537855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2542611-2542715:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2543830-2543937:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2545302-2545508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2557161-2557537:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2568642-2568840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2610339-2610586:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2611152-2611266:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2627895-2628140:1:exon

GRIA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: GRIA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 3 isoform X1
translation: MARQKKMGQSVLRAVFFLVLGLLGHSHGGFPNTISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFDTYGRRTNYTIDVYEMKVTGSRKAGYWNEYERFVPFSDQQISNDSASAENRTIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMKLTKNTQNFKPAPATNTQNYATYREGYNVYGTESVKI
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(2327542..2327650,2328820..2328978,2405545..2405784,2480032..2480219,2514292..2514345,2533456..2533617,2537688..2537855,2542611..2542715,2543830..2543937,2545302..2545508,2557161..2557537,2568642..2568840,2610339..2610586,2625167..2625281,2627895..2628140)
location: region:2327542-2628140:1
so has part: feature:2327542-2327650:1:exon
so has part: feature:2328820-2328978:1:exon
so has part: feature:2405545-2405784:1:exon
so has part: feature:2480032-2480219:1:exon
so has part: feature:2514292-2514345:1:exon
so has part: feature:2533456-2533617:1:exon
so has part: feature:2537688-2537855:1:exon
so has part: feature:2542611-2542715:1:exon
so has part: feature:2543830-2543937:1:exon
so has part: feature:2545302-2545508:1:exon
so has part: feature:2557161-2557537:1:exon
so has part: feature:2568642-2568840:1:exon
so has part: feature:2610339-2610586:1:exon
so has part: feature:2625167-2625281:1:exon
so has part: feature:2627895-2628140:1:exon

XP_019811725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2327542-2327650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2328820-2328978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2405545-2405784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2480032-2480219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2514292-2514345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2533456-2533617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2537688-2537855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2542611-2542715:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2543830-2543937:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2545302-2545508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2557161-2557537:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2568642-2568840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2610339-2610586:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2625167-2625281:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2627895-2628140:1:exon

GRIA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: GRIA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 3 isoform X1
translation: MARQKKMGQSVLRAVFFLVLGLLGHSHGGFPNTISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFDTYGRRTNYTIDVYEMKVTGSRKAGYWNEYERFVPFSDQQISNDSASAENRTIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMKLTKNTQNFKPAPATNTQNYATYREGYNVYGTESVKI
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(2327542..2327650,2328820..2328978,2405545..2405784,2480032..2480219,2514292..2514345,2533456..2533617,2537688..2537855,2542611..2542715,2543830..2543937,2545302..2545508,2557161..2557537,2568642..2568840,2610339..2610586,2625167..2625281,2627895..2628140)
location: region:2327542-2628140:1
so has part: feature:2327542-2327650:1:exon
so has part: feature:2328820-2328978:1:exon
so has part: feature:2405545-2405784:1:exon
so has part: feature:2480032-2480219:1:exon
so has part: feature:2514292-2514345:1:exon
so has part: feature:2533456-2533617:1:exon
so has part: feature:2537688-2537855:1:exon
so has part: feature:2542611-2542715:1:exon
so has part: feature:2543830-2543937:1:exon
so has part: feature:2545302-2545508:1:exon
so has part: feature:2557161-2557537:1:exon
so has part: feature:2568642-2568840:1:exon
so has part: feature:2610339-2610586:1:exon
so has part: feature:2625167-2625281:1:exon
so has part: feature:2627895-2628140:1:exon

XP_019811726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2327542-2327650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2328820-2328978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2405545-2405784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2480032-2480219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2514292-2514345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2533456-2533617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2537688-2537855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2542611-2542715:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2543830-2543937:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2545302-2545508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2557161-2557537:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2568642-2568840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2610339-2610586:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2625167-2625281:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2627895-2628140:1:exon

GRIA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: GRIA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 3 isoform X1
translation: MARQKKMGQSVLRAVFFLVLGLLGHSHGGFPNTISIGGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDSSNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDILLERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGNIQFDTYGRRTNYTIDVYEMKVTGSRKAGYWNEYERFVPFSDQQISNDSASAENRTIVVTTILESPYVMYKKNHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMKLTKNTQNFKPAPATNTQNYATYREGYNVYGTESVKI
SIO_010081: GRIA3
subclass of: SO_0000673
so part of: GRIA3
location: join(2327542..2327650,2328820..2328978,2405545..2405784,2480032..2480219,2514292..2514345,2533456..2533617,2537688..2537855,2542611..2542715,2543830..2543937,2545302..2545508,2557161..2557537,2568642..2568840,2610339..2610586,2625167..2625281,2627895..2628140)
location: region:2327542-2628140:1
so has part: feature:2327542-2327650:1:exon
so has part: feature:2328820-2328978:1:exon
so has part: feature:2405545-2405784:1:exon
so has part: feature:2480032-2480219:1:exon
so has part: feature:2514292-2514345:1:exon
so has part: feature:2533456-2533617:1:exon
so has part: feature:2537688-2537855:1:exon
so has part: feature:2542611-2542715:1:exon
so has part: feature:2543830-2543937:1:exon
so has part: feature:2545302-2545508:1:exon
so has part: feature:2557161-2557537:1:exon
so has part: feature:2568642-2568840:1:exon
so has part: feature:2610339-2610586:1:exon
so has part: feature:2625167-2625281:1:exon
so has part: feature:2627895-2628140:1:exon

XP_019811727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2327542-2327650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2328820-2328978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2405545-2405784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2480032-2480219:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2514292-2514345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2533456-2533617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2537688-2537855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2542611-2542715:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2543830-2543937:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2545302-2545508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2557161-2557537:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2568642-2568840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2610339-2610586:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2625167-2625281:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2627895-2628140:1:exon

THOC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: THOC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2706549..2763910)
location: region:2706549-2763910:-1
so has part: feature:2706549-2763910:-1:exon
subclass of: SO_0000010

109555185
type: Gene
SIO_000068: ncbigene

position:2706549:-1
position: 2706549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2763910:-1
position: 2763910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2706549-2763910:-1:exon

THOC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: THOC2
product: THO complex 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 31 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_019955827.1
SIO_010081: THOC2
subclass of: SO_0000673
so part of: THOC2
location: complement(join(2706549..2707351,2715360..2715405,2715885..2715961,2717835..2717992,2718075..2718144,2718480..2718617,2723375..2723410,2724891..2724949,2725110..2725540,2726211..2726313,2726562..2726740,2727249..2727433,2727523..2727654,2728019..2728147,2729046..2729203,2729863..2730004,2731014..2731289,2735671..2735835,2736907..2737086,2738080..2738197,2739615..2739711,2742575..2742655,2743066..2743159,2743815..2743899,2747746..2747847,2747947..2748077,2748519..2748560,2758545..2758740,2760024..2760196,2760760..2760915,2763814..2763910))
location: region:2706549-2763910:-1
so has part: feature:2763814-2763910:-1:exon
so has part: feature:2760760-2760915:-1:exon
so has part: feature:2760024-2760196:-1:exon
so has part: feature:2758545-2758740:-1:exon
so has part: feature:2748519-2748560:-1:exon
so has part: feature:2747947-2748077:-1:exon
so has part: feature:2747746-2747847:-1:exon
so has part: feature:2743815-2743899:-1:exon
so has part: feature:2743066-2743159:-1:exon
so has part: feature:2742575-2742655:-1:exon
so has part: feature:2739615-2739711:-1:exon
so has part: feature:2738080-2738197:-1:exon
so has part: feature:2736907-2737086:-1:exon
so has part: feature:2735671-2735835:-1:exon
so has part: feature:2731014-2731289:-1:exon
so has part: feature:2729863-2730004:-1:exon
so has part: feature:2729046-2729203:-1:exon
so has part: feature:2728019-2728147:-1:exon
so has part: feature:2727523-2727654:-1:exon
so has part: feature:2727249-2727433:-1:exon
so has part: feature:2726562-2726740:-1:exon
so has part: feature:2726211-2726313:-1:exon
so has part: feature:2725110-2725540:-1:exon
so has part: feature:2724891-2724949:-1:exon
so has part: feature:2723375-2723410:-1:exon
so has part: feature:2718480-2718617:-1:exon
so has part: feature:2718075-2718144:-1:exon
so has part: feature:2717835-2717992:-1:exon
so has part: feature:2715885-2715961:-1:exon
so has part: feature:2715360-2715405:-1:exon
so has part: feature:2706549-2707351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2763814-2763910:-1:exon

position:2763814:-1
position: 2763814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2760760-2760915:-1:exon

position:2760760:-1
position: 2760760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2760915:-1
position: 2760915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2760024-2760196:-1:exon

position:2760024:-1
position: 2760024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2760196:-1
position: 2760196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2758545-2758740:-1:exon

position:2758545:-1
position: 2758545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2758740:-1
position: 2758740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2748519-2748560:-1:exon

position:2748519:-1
position: 2748519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2748560:-1
position: 2748560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2747947-2748077:-1:exon

position:2747947:-1
position: 2747947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2748077:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2747746-2747847:-1:exon

position:2747746:-1
position: 2747746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2747847:-1
position: 2747847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2743815-2743899:-1:exon

position:2743815:-1
position: 2743815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2743899:-1
position: 2743899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2743066-2743159:-1:exon

position:2743066:-1
position: 2743066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2743159:-1
position: 2743159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2742575-2742655:-1:exon

position:2742575:-1
position: 2742575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2742655:-1
position: 2742655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2739615-2739711:-1:exon

position:2739615:-1
position: 2739615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2739711:-1
position: 2739711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2738080-2738197:-1:exon

position:2738080:-1
position: 2738080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2738197:-1
position: 2738197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2736907-2737086:-1:exon

position:2736907:-1
position: 2736907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2737086:-1
position: 2737086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2735671-2735835:-1:exon

position:2735671:-1
position: 2735671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2735835:-1
position: 2735835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2731014-2731289:-1:exon

position:2731014:-1
position: 2731014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2731289:-1
position: 2731289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2729863-2730004:-1:exon

position:2729863:-1
position: 2729863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2730004:-1
position: 2730004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2729046-2729203:-1:exon

position:2729046:-1
position: 2729046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2729203:-1
position: 2729203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2728019-2728147:-1:exon

position:2728019:-1
position: 2728019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2728147:-1
position: 2728147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2727523-2727654:-1:exon

position:2727523:-1
position: 2727523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2727654:-1
position: 2727654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2727249-2727433:-1:exon

position:2727249:-1
position: 2727249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2727433:-1
position: 2727433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2726562-2726740:-1:exon

position:2726562:-1
position: 2726562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726740:-1
position: 2726740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2726211-2726313:-1:exon

position:2726211:-1
position: 2726211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726313:-1
position: 2726313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2725110-2725540:-1:exon

position:2725110:-1
position: 2725110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2725540:-1
position: 2725540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2724891-2724949:-1:exon

position:2724891:-1
position: 2724891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2724949:-1
position: 2724949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2723375-2723410:-1:exon

position:2723375:-1
position: 2723375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2723410:-1
position: 2723410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2718480-2718617:-1:exon

position:2718480:-1
position: 2718480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2718617:-1
position: 2718617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2718075-2718144:-1:exon

position:2718075:-1
position: 2718075
reference: sequence
type: ReverseStrandPosition
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position:2718144:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2717835-2717992:-1:exon

position:2717835:-1
position: 2717835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2717992:-1
position: 2717992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2715885-2715961:-1:exon

position:2715885:-1
position: 2715885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2715961:-1
position: 2715961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2715360-2715405:-1:exon

position:2715360:-1
position: 2715360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2715405:-1
position: 2715405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2706549-2707351:-1:exon

position:2707351:-1
position: 2707351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109554755
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2709014..2711543
location: region:2709014-2711543:1
so has part: feature:2709014-2711543:1:exon

109554755
type: Gene
SIO_000068: ncbigene

position:2709014:1
position: 2709014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2711543:1
position: 2711543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2709014-2711543:1:exon

LOC109554755
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554755
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109554755
subclass of: SO_0000673
so part of: LOC109554755
location: 2709014..2711543
location: region:2709014-2711543:1
so has part: feature:2709014-2711543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2709014-2711543:1:exon

THOC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: THOC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THO complex subunit 2
translation: MDEHKREIVEAKQIVRKLTMVVLSSDKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQHAQSIMDQXPPYYAASHKLIALAICKLIHITIEPLYRRVGXPKGAKGSPVSALQNKRAPKQAESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGXKQEDKEKTEVILSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLIXPVVDSLKYLTSLNYDXLAYCIIEALANPEKEKMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHXLALPLCLLMAQQRNGXIFQEXGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKXVPSIDVLCNEFHTPHDAAFFLSRPMYXHHISSKYDELKKSEKGSKQQHKVHKYITSXEMVMAPVHXAVVSLHVSKVWDDISPQFYATFWSLTMYDLAXPHTSYEREVNKLKIQMKAIDBNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLXLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRVFSDIIYTVXSCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFDGGNKADQLDYXNFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASVQNGPGXGPSSSSIGSVSKXDESSTEDTDKSRERSQCGVKAVNKASSATPKGNSXNGNSGSNSSKTVKENDKEKGKEKEKEKKEKTPXTTPEARVLGKDGKEKPKEERPNKDEKARETKERTXKSDKEKEKFKKEEKAKDEKFKTTVPNVESKSTQEKEREKEPSRERDXAKEMKSKENVKGGEKTPVSGXLKSPVPRSDIXEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYINHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPXDLTKRRKEENGTMGVSKHKSESXCESPYPNEKDKEKNKSKSSGKEKGGDSFKSXKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKKHHKSSDKHR
SIO_010081: THOC2
subclass of: SO_0000673
so part of: THOC2
location: complement(join(2715378..2715405,2715885..2715961,2717835..2717992,2718075..2718144,2718480..2718617,2723375..2723410,2724891..2724949,2725110..2725540,2726211..2726313,2726562..2726740,2727249..2727433,2727523..2727654,2728019..2728147,2729046..2729203,2729863..2730004,2731014..2731289,2735671..2735835,2736907..2737086,2738080..2738197,2739615..2739711,2742575..2742655,2743066..2743159,2743815..2743899,2747746..2747847,2747947..2748077,2748519..2748560,2758545..2758740,2760024..2760196,2760760..2760891))
location: region:2715378-2760891:-1
so has part: feature:2760760-2760891:-1:exon
so has part: feature:2760024-2760196:-1:exon
so has part: feature:2758545-2758740:-1:exon
so has part: feature:2748519-2748560:-1:exon
so has part: feature:2747947-2748077:-1:exon
so has part: feature:2747746-2747847:-1:exon
so has part: feature:2743815-2743899:-1:exon
so has part: feature:2743066-2743159:-1:exon
so has part: feature:2742575-2742655:-1:exon
so has part: feature:2739615-2739711:-1:exon
so has part: feature:2738080-2738197:-1:exon
so has part: feature:2736907-2737086:-1:exon
so has part: feature:2735671-2735835:-1:exon
so has part: feature:2731014-2731289:-1:exon
so has part: feature:2729863-2730004:-1:exon
so has part: feature:2729046-2729203:-1:exon
so has part: feature:2728019-2728147:-1:exon
so has part: feature:2727523-2727654:-1:exon
so has part: feature:2727249-2727433:-1:exon
so has part: feature:2726562-2726740:-1:exon
so has part: feature:2726211-2726313:-1:exon
so has part: feature:2725110-2725540:-1:exon
so has part: feature:2724891-2724949:-1:exon
so has part: feature:2723375-2723410:-1:exon
so has part: feature:2718480-2718617:-1:exon
so has part: feature:2718075-2718144:-1:exon
so has part: feature:2717835-2717992:-1:exon
so has part: feature:2715885-2715961:-1:exon
so has part: feature:2715378-2715405:-1:exon

XP_019811386.1
type: Protein
SIO_000068: ncbiprotein

position:2715378:-1
position: 2715378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2760891:-1
position: 2760891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2760760-2760891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2760024-2760196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2758545-2758740:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2748519-2748560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2747947-2748077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2747746-2747847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2743815-2743899:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2743066-2743159:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2742575-2742655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2739615-2739711:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2738080-2738197:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2736907-2737086:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2735671-2735835:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2731014-2731289:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2729863-2730004:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2729046-2729203:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2728019-2728147:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2727523-2727654:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2727249-2727433:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2726562-2726740:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2726211-2726313:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2725110-2725540:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2724891-2724949:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2723375-2723410:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2718480-2718617:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2718075-2718144:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2717835-2717992:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2715885-2715961:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2715378-2715405:-1:exon

LOC109554756
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2893726..2920240
location: region:2893726-2920240:1
so has part: feature:2893726-2920240:1:exon

109554756
type: Gene
SIO_000068: ncbigene

position:2893726:1
position: 2893726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2920240:1
position: 2920240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2893726-2920240:1:exon

LOC109554756
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554756
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109554756
subclass of: SO_0000673
so part of: LOC109554756
location: 2893726..2893942
location: region:2893726-2893942:1
so has part: feature:2893726-2893942:1:exon

position:2893942:1
position: 2893942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2893726-2893942:1:exon

LOC109554756
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554756
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109554756
subclass of: SO_0000673
so part of: LOC109554756
location: 2904769..2904808
location: region:2904769-2904808:1
so has part: feature:2904769-2904808:1:exon

position:2904769:1
position: 2904769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904808:1
position: 2904808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2904769-2904808:1:exon

LOC109554756
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554756
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109554756
subclass of: SO_0000673
so part of: LOC109554756
location: 2919234..2920240
location: region:2919234-2920240:1
so has part: feature:2919234-2920240:1:exon

position:2919234:1
position: 2919234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2919234-2920240:1:exon

LOC109555091
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3475380..3475868
location: region:3475380-3475868:1
so has part: feature:3475380-3475868:1:exon

109555091
type: Gene
SIO_000068: ncbigene

position:3475380:1
position: 3475380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3475868:1
position: 3475868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3475380-3475868:1:exon

LOC109555091
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109555091
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC109555091
subclass of: SO_0000673
so part of: LOC109555091
location: 3475380..3475868
location: region:3475380-3475868:1
so has part: feature:3475380-3475868:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3475380-3475868:1:exon

LOC109555010
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3714079..3715551)
location: region:3714079-3715551:-1
so has part: feature:3714079-3715551:-1:exon
subclass of: SO_0000010

109555010
type: Gene
SIO_000068: ncbigene

position:3714079:-1
position: 3714079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3715551:-1
position: 3715551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3714079-3715551:-1:exon

LOC109555010
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109555010
product: DDB1- and CUL4-associated factor 12-like protein 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019955567.1
SIO_010081: LOC109555010
subclass of: SO_0000673
so part of: LOC109555010
location: complement(3714079..3715551)
location: region:3714079-3715551:-1
so has part: feature:3714079-3715551:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3714079-3715551:-1:exon

LOC109555010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109555010
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 12-like protein 2
translation: MAPQQTGSRKRKAPALQEAAAGSSSQVSAAVDGDGPLPLKKPKRPAAPRSLVNYLKGREVGARGRARLPGFXXELRGFAVRKLPELLRERELXLGTLNKVFASQWLNARQVVCGTKCNTLFVVDVQSGQITRIPLMRDRGPPPARAQPGCGIHAIQLNPSKTLLATGGENPNSLAIYQLPTLDPMCLGDRHGHKDWIFAIAWMSDTVAVSGSRDGTLALWKIDPDIFQGSIAWHSDAGLPVYAHIRPRDVENIPRASTNPSNRKVRALAFSAKNQELGAVSLDGYFHLWKARSTLSRLLSIRLPYCRENVCLTYCDELSLYAVGSQSHVSFLDPRQRQQNIRPLCSREGGTGVRSLSFYEHIVTVGTGHGSLLFYDVRAQKFLEERASASXYSSPGHAGRKLKLTCGRGWLNHDDLWVNYFGGIGEFPNALYTHCYNWPEMKLFVAGGPLPSGLHGNYAGLWS
SIO_010081: LOC109555010
subclass of: SO_0000673
so part of: LOC109555010
location: complement(3714159..3715551)
location: region:3714159-3715551:-1
so has part: feature:3714159-3715551:-1:exon

XP_019811126.1
type: Protein
SIO_000068: ncbiprotein

position:3714159:-1
position: 3714159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3714159-3715551:-1:exon

LOC109554757
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4054354..4055787)
location: region:4054354-4055787:-1
so has part: feature:4054354-4055787:-1:exon
subclass of: SO_0000010

109554757
type: Gene
SIO_000068: ncbigene

position:4054354:-1
position: 4054354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4055787:-1
position: 4055787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4054354-4055787:-1:exon

LOC109554757
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109554757
product: DDB1- and CUL4-associated factor 12-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins
transcript id: XM_019955395.1
SIO_010081: LOC109554757
subclass of: SO_0000673
so part of: LOC109554757
location: complement(4054354..4055787)
location: region:4054354-4055787:-1
so has part: feature:4054354-4055787:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4054354-4055787:-1:exon

LOC109554757
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109554757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 12-like protein 2
translation: MAPEQTGNKKREEPAPQKAAEGSSSLSSSSPGSSSPGSSSPGSAAVHADGPQPPXKPKRMVVRRSLVDYLRGREVGAPGRAGLSGFDSELHGFAVRKLPELLRERELSLGTVDKVFASQWLNARQVVCGTKCNTLFVVDVRSSQVTRIPLIRDRXHPPARAQPGCGIHAVQLNPSKTLLATGGENPNSLAVYWLPTLDPLCLGDHGHKDWIFAIAWMSDTVVVSGSRDGTLGIWKIDPDVFRSSIAWRNXAXLSVYAHIRPAEVEDVXRAATNPRNCKVRAVAFXAKRQELGAVTMDGYFHLWKAQNTLSXLLXIRLPYXRENVCLTYCDELSLYAVGSQSHVSFLDLRQGHQSIRYLCSREGGTGVRSLSFYEHIVTXGTGXGSLLFYDIRAQKFLEEKVSDSQHSSPXPTGRRFRLICGRGWLNQDDLQMNDLSALXELPNALYTHCYNWPEMKLFVAGGPLPSXLRGNYAGLWS
SIO_010081: LOC109554757
subclass of: SO_0000673
so part of: LOC109554757
location: complement(4054354..4055787)
location: region:4054354-4055787:-1
so has part: feature:4054354-4055787:-1:exon

XP_019810954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4054354-4055787:-1:exon

PRR32
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PRR32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4312946..4315009
location: region:4312946-4315009:1
so has part: feature:4312946-4315009:1:exon
subclass of: SO_0000010

109555497
type: Gene
SIO_000068: ncbigene

position:4312946:1
position: 4312946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4315009:1
position: 4315009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4312946-4315009:1:exon

PRR32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PRR32
product: proline rich 32
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 183 samples with support for all annotated introns
transcript id: XM_019956421.1
SIO_010081: PRR32
subclass of: SO_0000673
so part of: PRR32
location: join(4312946..4313199,4313979..4315009)
location: region:4312946-4315009:1
so has part: feature:4312946-4313199:1:exon
so has part: feature:4313979-4315009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4312946-4313199:1:exon

position:4313199:1
position: 4313199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4313979-4315009:1:exon

position:4313979:1
position: 4313979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRR32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PRR32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 32
translation: MACIENVLGGHAPSPTAVAAAENGNREPRPSLPFQCPKDDAGSWGHPGVPLRPPFKVLSDLARERLERPSERTGSCIPVDGSRALKPPYGPPPAVAEEPLATGEVNSSEGPAGWRQSGQDSINNVSQEFSGSPPALMVGGTKVSNGGTERGGSNAGLYVALPRGQGFFPSRGPQVRGPTHISTLRSGIMMELPPGSTRVTGKERLARVSFPLGGPRHPVKNWPRPMPLASSTTGLGSRTTAHCFIPPRPPSFNPFLAMPMAFAPPPIFGPPLPSCFADFPSWGMPAPASSNRENN
SIO_010081: PRR32
subclass of: SO_0000673
so part of: PRR32
location: join(4313180..4313199,4313979..4314846)
location: region:4313180-4314846:1
so has part: feature:4313180-4313199:1:exon
so has part: feature:4313979-4314846:1:exon

XP_019811980.1
type: Protein
SIO_000068: ncbiprotein

position:4313180:1
position: 4313180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4314846:1
position: 4314846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4313180-4313199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4313979-4314846:1:exon

LOC109555116
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5621453..5622482)
location: region:5621453-5622482:-1
so has part: feature:5621453-5622482:-1:exon

109555116
type: Gene
SIO_000068: ncbigene

position:5621453:-1
position: 5621453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5622482:-1
position: 5622482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5621453-5622482:-1:exon

LOC109555116
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109555116
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109555116
subclass of: SO_0000673
so part of: LOC109555116
location: complement(5621453..5622482)
location: region:5621453-5622482:-1
so has part: feature:5621453-5622482:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5621453-5622482:-1:exon

LOC109555571
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5658297..5797904)
location: region:5658297-5797904:-1
so has part: feature:5658297-5797904:-1:exon
subclass of: SO_0000011

109555571
type: Gene
SIO_000068: ncbigene

position:5658297:-1
position: 5658297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5797904:-1
position: 5797904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5658297-5797904:-1:exon

LOC109555571
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109555571
product: uncharacterized LOC109555571, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002180291.1
SIO_010081: LOC109555571
subclass of: SO_0000673
so part of: LOC109555571
location: complement(join(5658297..5659243,5659876..5660041,5661840..5662382,5794934..5795039,5797772..5797904))
location: region:5658297-5797904:-1
so has part: feature:5797772-5797904:-1:exon
so has part: feature:5794934-5795039:-1:exon
so has part: feature:5661840-5662382:-1:exon
so has part: feature:5659876-5660041:-1:exon
so has part: feature:5658297-5659243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5797772-5797904:-1:exon

position:5797772:-1
position: 5797772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5794934-5795039:-1:exon

position:5794934:-1
position: 5794934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5795039:-1
position: 5795039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5661840-5662382:-1:exon

position:5661840:-1
position: 5661840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5662382:-1
position: 5662382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5659876-5660041:-1:exon

position:5659876:-1
position: 5659876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5660041:-1
position: 5660041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5658297-5659243:-1:exon

position:5659243:-1
position: 5659243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109555571
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109555571
product: uncharacterized LOC109555571, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002180290.1
SIO_010081: LOC109555571
subclass of: SO_0000673
so part of: LOC109555571
location: complement(join(5658297..5659243,5659459..5660041,5661840..5662382,5794934..5795039,5797772..5797904))
location: region:5658297-5797904:-1
so has part: feature:5797772-5797904:-1:exon
so has part: feature:5794934-5795039:-1:exon
so has part: feature:5661840-5662382:-1:exon
so has part: feature:5659459-5660041:-1:exon
so has part: feature:5658297-5659243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5797772-5797904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5794934-5795039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5661840-5662382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5659459-5660041:-1:exon

position:5659459:-1
position: 5659459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5658297-5659243:-1:exon

LOC109555571
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109555571
product: uncharacterized LOC109555571, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_002180289.1
SIO_010081: LOC109555571
subclass of: SO_0000673
so part of: LOC109555571
location: complement(join(5658297..5660041,5661840..5662382,5794934..5795039,5797772..5797904))
location: region:5658297-5797904:-1
so has part: feature:5797772-5797904:-1:exon
so has part: feature:5794934-5795039:-1:exon
so has part: feature:5661840-5662382:-1:exon
so has part: feature:5658297-5660041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5797772-5797904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5794934-5795039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5661840-5662382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5658297-5660041:-1:exon

SMARCA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: SMARCA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6091106..6163651)
location: region:6091106-6163651:-1
so has part: feature:6091106-6163651:-1:exon
subclass of: SO_0000010

109555259
type: Gene
SIO_000068: ncbigene

position:6091106:-1
position: 6091106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6163651:-1
position: 6163651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6091106-6163651:-1:exon

SMARCA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SMARCA1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_019955985.1
SIO_010081: SMARCA1
subclass of: SO_0000673
so part of: SMARCA1
location: complement(join(6091106..6091840,6092948..6093058,6105695..6105907,6106032..6106150,6108571..6108703,6111357..6111479,6119669..6119782,6120039..6120149,6126163..6126282,6127730..6127878,6128643..6128775,6130956..6131108,6132037..6132072,6134636..6134757,6135874..6136100,6137382..6137491,6141046..6141114,6142447..6142578,6143702..6143857,6152751..6152930,6155844..6155944,6156051..6156151,6156460..6156626,6158582..6158668,6163307..6163651))
location: region:6091106-6163651:-1
so has part: feature:6163307-6163651:-1:exon
so has part: feature:6158582-6158668:-1:exon
so has part: feature:6156460-6156626:-1:exon
so has part: feature:6156051-6156151:-1:exon
so has part: feature:6155844-6155944:-1:exon
so has part: feature:6152751-6152930:-1:exon
so has part: feature:6143702-6143857:-1:exon
so has part: feature:6142447-6142578:-1:exon
so has part: feature:6141046-6141114:-1:exon
so has part: feature:6137382-6137491:-1:exon
so has part: feature:6135874-6136100:-1:exon
so has part: feature:6134636-6134757:-1:exon
so has part: feature:6132037-6132072:-1:exon
so has part: feature:6130956-6131108:-1:exon
so has part: feature:6128643-6128775:-1:exon
so has part: feature:6127730-6127878:-1:exon
so has part: feature:6126163-6126282:-1:exon
so has part: feature:6120039-6120149:-1:exon
so has part: feature:6119669-6119782:-1:exon
so has part: feature:6111357-6111479:-1:exon
so has part: feature:6108571-6108703:-1:exon
so has part: feature:6106032-6106150:-1:exon
so has part: feature:6105695-6105907:-1:exon
so has part: feature:6092948-6093058:-1:exon
so has part: feature:6091106-6091840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6163307-6163651:-1:exon

position:6163307:-1
position: 6163307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6158582-6158668:-1:exon

position:6158582:-1
position: 6158582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6158668:-1
position: 6158668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6156460-6156626:-1:exon

position:6156460:-1
position: 6156460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6156626:-1
position: 6156626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6156051-6156151:-1:exon

position:6156051:-1
position: 6156051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6156151:-1
position: 6156151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6155844-6155944:-1:exon

position:6155844:-1
position: 6155844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6155944:-1
position: 6155944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6152751-6152930:-1:exon

position:6152751:-1
position: 6152751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6152930:-1
position: 6152930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6143702-6143857:-1:exon

position:6143702:-1
position: 6143702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6143857:-1
position: 6143857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6142447-6142578:-1:exon

position:6142447:-1
position: 6142447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6142578:-1
position: 6142578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6141046-6141114:-1:exon

position:6141046:-1
position: 6141046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6141114:-1
position: 6141114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6137382-6137491:-1:exon

position:6137382:-1
position: 6137382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6137491:-1
position: 6137491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6135874-6136100:-1:exon

position:6135874:-1
position: 6135874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6136100:-1
position: 6136100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6134636-6134757:-1:exon

position:6134636:-1
position: 6134636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6134757:-1
position: 6134757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6132037-6132072:-1:exon

position:6132037:-1
position: 6132037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6132072:-1
position: 6132072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6130956-6131108:-1:exon

position:6130956:-1
position: 6130956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6131108:-1
position: 6131108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6128643-6128775:-1:exon

position:6128643:-1
position: 6128643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6128775:-1
position: 6128775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6127730-6127878:-1:exon

position:6127730:-1
position: 6127730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6127878:-1
position: 6127878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6126163-6126282:-1:exon

position:6126163:-1
position: 6126163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6126282:-1
position: 6126282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6120039-6120149:-1:exon

position:6120039:-1
position: 6120039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6120149:-1
position: 6120149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6119669-6119782:-1:exon

position:6119669:-1
position: 6119669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6119782:-1
position: 6119782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6111357-6111479:-1:exon

position:6111357:-1
position: 6111357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6111479:-1
position: 6111479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6108571-6108703:-1:exon

position:6108571:-1
position: 6108571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6108703:-1
position: 6108703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6106032-6106150:-1:exon

position:6106032:-1
position: 6106032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6106150:-1
position: 6106150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6105695-6105907:-1:exon

position:6105695:-1
position: 6105695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6105907:-1
position: 6105907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6092948-6093058:-1:exon

position:6092948:-1
position: 6092948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6093058:-1
position: 6093058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6091106-6091840:-1:exon

position:6091840:-1
position: 6091840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMARCA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SMARCA1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: probable global transcription activator SNF2L1
translation: MEPDTAAVAGTVAASDATAAIVLIEDDQPGPSTSKEEGAAAAXXAATEATVATEKGEKKKEKNVSPFQLKLAVKASKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPRIKKDDKQSLISVGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRDFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTKNCLGDQKLVERLHTVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHGATHVFASKESELTDEDITTLLERGEKKTAEMNERLQKMGESSLRNFRMDIEQSLYKFEGEDYREKQKLGMVEWIEPPKRERKANYAVDAYFREALRVSEPKVPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPDIPNPAVAQREEQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEKKKRATKTPMSQKRKAESATESSGKKDVKKVKS
SIO_010081: SMARCA1
subclass of: SO_0000673
so part of: SMARCA1
location: complement(join(6091769..6091840,6092948..6093058,6105695..6105907,6106032..6106150,6108571..6108703,6111357..6111479,6119669..6119782,6120039..6120149,6126163..6126282,6127730..6127878,6128643..6128775,6130956..6131108,6132037..6132072,6134636..6134757,6135874..6136100,6137382..6137491,6141046..6141114,6142447..6142578,6143702..6143857,6152751..6152930,6155844..6155944,6156051..6156151,6156460..6156626,6158582..6158668,6163307..6163490))
location: region:6091769-6163490:-1
so has part: feature:6163307-6163490:-1:exon
so has part: feature:6158582-6158668:-1:exon
so has part: feature:6156460-6156626:-1:exon
so has part: feature:6156051-6156151:-1:exon
so has part: feature:6155844-6155944:-1:exon
so has part: feature:6152751-6152930:-1:exon
so has part: feature:6143702-6143857:-1:exon
so has part: feature:6142447-6142578:-1:exon
so has part: feature:6141046-6141114:-1:exon
so has part: feature:6137382-6137491:-1:exon
so has part: feature:6135874-6136100:-1:exon
so has part: feature:6134636-6134757:-1:exon
so has part: feature:6132037-6132072:-1:exon
so has part: feature:6130956-6131108:-1:exon
so has part: feature:6128643-6128775:-1:exon
so has part: feature:6127730-6127878:-1:exon
so has part: feature:6126163-6126282:-1:exon
so has part: feature:6120039-6120149:-1:exon
so has part: feature:6119669-6119782:-1:exon
so has part: feature:6111357-6111479:-1:exon
so has part: feature:6108571-6108703:-1:exon
so has part: feature:6106032-6106150:-1:exon
so has part: feature:6105695-6105907:-1:exon
so has part: feature:6092948-6093058:-1:exon
so has part: feature:6091769-6091840:-1:exon

XP_019811544.1
type: Protein
SIO_000068: ncbiprotein

position:6091769:-1
position: 6091769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6163490:-1
position: 6163490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6163307-6163490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6158582-6158668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6156460-6156626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6156051-6156151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6155844-6155944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6152751-6152930:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6143702-6143857:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6142447-6142578:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6141046-6141114:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6137382-6137491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6135874-6136100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6134636-6134757:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6132037-6132072:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6130956-6131108:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6128643-6128775:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6127730-6127878:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6126163-6126282:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6120039-6120149:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6119669-6119782:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6111357-6111479:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6108571-6108703:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6106032-6106150:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6105695-6105907:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6092948-6093058:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6091769-6091840:-1:exon

OCRL
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: OCRL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6182582..6270024
location: region:6182582-6270024:1
so has part: feature:6182582-6270024:1:exon
subclass of: SO_0000010

109555222
type: Gene
SIO_000068: ncbigene

position:6182582:1
position: 6182582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6270024:1
position: 6270024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6182582-6270024:1:exon

OCRL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: OCRL
product: OCRL, inositol polyphosphate-5-phosphatase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 25 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 161 samples with support for all annotated introns
transcript id: XM_019955900.1
SIO_010081: OCRL
subclass of: SO_0000673
so part of: OCRL
location: join(6182582..6182681,6187041..6187120,6190161..6190199,6235629..6235739,6236200..6236289,6236999..6237119,6237208..6237369,6238675..6238776,6239292..6239406,6240487..6240603,6240710..6240897,6242687..6242798,6244322..6244431,6246801..6246936,6252318..6252428,6253038..6253203,6253473..6253708,6262888..6262911,6265676..6265792,6266692..6266776,6267364..6267491,6268261..6268372,6268578..6270024)
location: region:6182582-6270024:1
so has part: feature:6182582-6182681:1:exon
so has part: feature:6187041-6187120:1:exon
so has part: feature:6190161-6190199:1:exon
so has part: feature:6235629-6235739:1:exon
so has part: feature:6236200-6236289:1:exon
so has part: feature:6236999-6237119:1:exon
so has part: feature:6237208-6237369:1:exon
so has part: feature:6238675-6238776:1:exon
so has part: feature:6239292-6239406:1:exon
so has part: feature:6240487-6240603:1:exon
so has part: feature:6240710-6240897:1:exon
so has part: feature:6242687-6242798:1:exon
so has part: feature:6244322-6244431:1:exon
so has part: feature:6246801-6246936:1:exon
so has part: feature:6252318-6252428:1:exon
so has part: feature:6253038-6253203:1:exon
so has part: feature:6253473-6253708:1:exon
so has part: feature:6262888-6262911:1:exon
so has part: feature:6265676-6265792:1:exon
so has part: feature:6266692-6266776:1:exon
so has part: feature:6267364-6267491:1:exon
so has part: feature:6268261-6268372:1:exon
so has part: feature:6268578-6270024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6182582-6182681:1:exon

position:6182681:1
position: 6182681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6187041-6187120:1:exon

position:6187041:1
position: 6187041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6187120:1
position: 6187120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6190161-6190199:1:exon

position:6190161:1
position: 6190161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6190199:1
position: 6190199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6235629-6235739:1:exon

position:6235629:1
position: 6235629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6235739:1
position: 6235739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6236200-6236289:1:exon

position:6236200:1
position: 6236200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6236289:1
position: 6236289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6236999-6237119:1:exon

position:6236999:1
position: 6236999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6237119:1
position: 6237119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6237208-6237369:1:exon

position:6237208:1
position: 6237208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6237369:1
position: 6237369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6238675-6238776:1:exon

position:6238675:1
position: 6238675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6238776:1
position: 6238776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6239292-6239406:1:exon

position:6239292:1
position: 6239292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6239406:1
position: 6239406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6240487-6240603:1:exon

position:6240487:1
position: 6240487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6240603:1
position: 6240603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6240710-6240897:1:exon

position:6240710:1
position: 6240710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6240897:1
position: 6240897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6242687-6242798:1:exon

position:6242687:1
position: 6242687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6242798:1
position: 6242798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6244322-6244431:1:exon

position:6244322:1
position: 6244322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6244431:1
position: 6244431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6246801-6246936:1:exon

position:6246801:1
position: 6246801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6246936:1
position: 6246936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6252318-6252428:1:exon

position:6252318:1
position: 6252318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6252428:1
position: 6252428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6253038-6253203:1:exon

position:6253038:1
position: 6253038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6253203:1
position: 6253203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6253473-6253708:1:exon

position:6253473:1
position: 6253473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6253708:1
position: 6253708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6262888-6262911:1:exon

position:6262888:1
position: 6262888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6262911:1
position: 6262911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6265676-6265792:1:exon

position:6265676:1
position: 6265676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6265792:1
position: 6265792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6266692-6266776:1:exon

position:6266692:1
position: 6266692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6266776:1
position: 6266776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6267364-6267491:1:exon

position:6267364:1
position: 6267364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6267491:1
position: 6267491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6268261-6268372:1:exon

position:6268261:1
position: 6268261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6268372:1
position: 6268372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6268578-6270024:1:exon

position:6268578:1
position: 6268578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OCRL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: OCRL
product: OCRL, inositol polyphosphate-5-phosphatase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 23 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 185 samples with support for all annotated introns
transcript id: XM_019955901.1
SIO_010081: OCRL
subclass of: SO_0000673
so part of: OCRL
location: join(6182582..6182681,6187041..6187120,6190161..6190199,6235629..6235739,6236200..6236289,6236999..6237119,6237208..6237369,6238675..6238776,6239292..6239406,6240487..6240603,6240710..6240897,6242687..6242798,6244322..6244431,6246801..6246936,6252318..6252428,6253038..6253203,6253473..6253708,6265676..6265792,6266692..6266776,6267364..6267491,6268261..6268372,6268578..6270024)
location: region:6182582-6270024:1
so has part: feature:6182582-6182681:1:exon
so has part: feature:6187041-6187120:1:exon
so has part: feature:6190161-6190199:1:exon
so has part: feature:6235629-6235739:1:exon
so has part: feature:6236200-6236289:1:exon
so has part: feature:6236999-6237119:1:exon
so has part: feature:6237208-6237369:1:exon
so has part: feature:6238675-6238776:1:exon
so has part: feature:6239292-6239406:1:exon
so has part: feature:6240487-6240603:1:exon
so has part: feature:6240710-6240897:1:exon
so has part: feature:6242687-6242798:1:exon
so has part: feature:6244322-6244431:1:exon
so has part: feature:6246801-6246936:1:exon
so has part: feature:6252318-6252428:1:exon
so has part: feature:6253038-6253203:1:exon
so has part: feature:6253473-6253708:1:exon
so has part: feature:6265676-6265792:1:exon
so has part: feature:6266692-6266776:1:exon
so has part: feature:6267364-6267491:1:exon
so has part: feature:6268261-6268372:1:exon
so has part: feature:6268578-6270024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6182582-6182681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6187041-6187120:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6190161-6190199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6235629-6235739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236200-6236289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6236999-6237119:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6237208-6237369:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6238675-6238776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6239292-6239406:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6240487-6240603:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6240710-6240897:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6242687-6242798:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6244322-6244431:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6246801-6246936:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6252318-6252428:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6253038-6253203:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6253473-6253708:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6265676-6265792:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6266692-6266776:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6267364-6267491:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6268261-6268372:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6268578-6270024:1:exon

OCRL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: OCRL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase OCRL-1 isoform X1
translation: MEMKGPLREPCALTLVQRNGQYELIIQLHKKEQRVQDIIPINSHFRCVQEAEETLLIDIASNSGCKIRIQGDWTGERRFEIPDEDHCVKFVSEVLAAQEAQSQLLVPDQKESSSWYQKLDTKDNSSVFSGLLGFEDNFSSMNLDKKISLQNQPIGVHREPPPPPSSVNRMLSREKEASNKEPPKVTNTMRKLFVPNTQSGQREGLIKHILAKREKEYVNIQTFRFFVGTWNVNGQSPDSGLEPWLNCDLNPPDIYCIGFQELDLSTEAFFYFESVKEQEWSLAVERSLHSKAKYKKVQLVRLVGMMLLIFARKDQLRYIRDVATETVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEEFERRNQDYKDICARMSFVVPNQTLPQLNIMKHDVVIWLGDLNYRLCMPDASEVKSLINKNDLQRLLKFDQLNIQRTQKKAFADFMEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGINVNQLHYRSHMELKTSDHKPVSALFRIGVKVVDERRYRKVFEDIVRIMDRMENDFLPSLELSRREFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPCEGYLEPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLHLDRGKDYFLTISGNYLPSCFGTSLEALCRMKRPIREVPVTKLIDLEEDSFLEKEKSLLQMVPLDEGASERPLKVPKEIWLLVDHLFRYACHQEDLFQTPGMQEELQQIIDCLDTSIPKTIPGSNHSVAEALLIFLEALPEPVICYELYQRCLDSAQDPRICRQVISQLPGCHRNVFRYLMAFLRELLKFSEYNNVNANMIATLFTSLLLRPPPNLMARQTPSDRQRATQFLLTFLLGSDED
SIO_010081: OCRL
subclass of: SO_0000673
so part of: OCRL
location: join(6182614..6182681,6187041..6187120,6190161..6190199,6235629..6235739,6236200..6236289,6236999..6237119,6237208..6237369,6238675..6238776,6239292..6239406,6240487..6240603,6240710..6240897,6242687..6242798,6244322..6244431,6246801..6246936,6252318..6252428,6253038..6253203,6253473..6253708,6262888..6262911,6265676..6265792,6266692..6266776,6267364..6267491,6268261..6268372,6268578..6268702)
location: region:6182614-6268702:1
so has part: feature:6182614-6182681:1:exon
so has part: feature:6187041-6187120:1:exon
so has part: feature:6190161-6190199:1:exon
so has part: feature:6235629-6235739:1:exon
so has part: feature:6236200-6236289:1:exon
so has part: feature:6236999-6237119:1:exon
so has part: feature:6237208-6237369:1:exon
so has part: feature:6238675-6238776:1:exon
so has part: feature:6239292-6239406:1:exon
so has part: feature:6240487-6240603:1:exon
so has part: feature:6240710-6240897:1:exon
so has part: feature:6242687-6242798:1:exon
so has part: feature:6244322-6244431:1:exon
so has part: feature:6246801-6246936:1:exon
so has part: feature:6252318-6252428:1:exon
so has part: feature:6253038-6253203:1:exon
so has part: feature:6253473-6253708:1:exon
so has part: feature:6262888-6262911:1:exon
so has part: feature:6265676-6265792:1:exon
so has part: feature:6266692-6266776:1:exon
so has part: feature:6267364-6267491:1:exon
so has part: feature:6268261-6268372:1:exon
so has part: feature:6268578-6268702:1:exon

XP_019811459.1
type: Protein
SIO_000068: ncbiprotein

position:6182614:1
position: 6182614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6268702:1
position: 6268702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6182614-6182681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6187041-6187120:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6190161-6190199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6235629-6235739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236200-6236289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6236999-6237119:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6237208-6237369:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6238675-6238776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6239292-6239406:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6240487-6240603:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6240710-6240897:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6242687-6242798:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6244322-6244431:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6246801-6246936:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6252318-6252428:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6253038-6253203:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6253473-6253708:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6262888-6262911:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6265676-6265792:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6266692-6266776:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6267364-6267491:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6268261-6268372:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6268578-6268702:1:exon

OCRL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: OCRL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase OCRL-1 isoform X2
translation: MEMKGPLREPCALTLVQRNGQYELIIQLHKKEQRVQDIIPINSHFRCVQEAEETLLIDIASNSGCKIRIQGDWTGERRFEIPDEDHCVKFVSEVLAAQEAQSQLLVPDQKESSSWYQKLDTKDNSSVFSGLLGFEDNFSSMNLDKKISLQNQPIGVHREPPPPPSSVNRMLSREKEASNKEPPKVTNTMRKLFVPNTQSGQREGLIKHILAKREKEYVNIQTFRFFVGTWNVNGQSPDSGLEPWLNCDLNPPDIYCIGFQELDLSTEAFFYFESVKEQEWSLAVERSLHSKAKYKKVQLVRLVGMMLLIFARKDQLRYIRDVATETVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEEFERRNQDYKDICARMSFVVPNQTLPQLNIMKHDVVIWLGDLNYRLCMPDASEVKSLINKNDLQRLLKFDQLNIQRTQKKAFADFMEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGINVNQLHYRSHMELKTSDHKPVSALFRIGVKVVDERRYRKVFEDIVRIMDRMENDFLPSLELSRREFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPCEGYLEPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLHLDRGKDYFLTISGNYLPSCFGTSLEALCRMKRPIREVPVTKLIDLEKSLLQMVPLDEGASERPLKVPKEIWLLVDHLFRYACHQEDLFQTPGMQEELQQIIDCLDTSIPKTIPGSNHSVAEALLIFLEALPEPVICYELYQRCLDSAQDPRICRQVISQLPGCHRNVFRYLMAFLRELLKFSEYNNVNANMIATLFTSLLLRPPPNLMARQTPSDRQRATQFLLTFLLGSDED
SIO_010081: OCRL
subclass of: SO_0000673
so part of: OCRL
location: join(6182614..6182681,6187041..6187120,6190161..6190199,6235629..6235739,6236200..6236289,6236999..6237119,6237208..6237369,6238675..6238776,6239292..6239406,6240487..6240603,6240710..6240897,6242687..6242798,6244322..6244431,6246801..6246936,6252318..6252428,6253038..6253203,6253473..6253708,6265676..6265792,6266692..6266776,6267364..6267491,6268261..6268372,6268578..6268702)
location: region:6182614-6268702:1
so has part: feature:6182614-6182681:1:exon
so has part: feature:6187041-6187120:1:exon
so has part: feature:6190161-6190199:1:exon
so has part: feature:6235629-6235739:1:exon
so has part: feature:6236200-6236289:1:exon
so has part: feature:6236999-6237119:1:exon
so has part: feature:6237208-6237369:1:exon
so has part: feature:6238675-6238776:1:exon
so has part: feature:6239292-6239406:1:exon
so has part: feature:6240487-6240603:1:exon
so has part: feature:6240710-6240897:1:exon
so has part: feature:6242687-6242798:1:exon
so has part: feature:6244322-6244431:1:exon
so has part: feature:6246801-6246936:1:exon
so has part: feature:6252318-6252428:1:exon
so has part: feature:6253038-6253203:1:exon
so has part: feature:6253473-6253708:1:exon
so has part: feature:6265676-6265792:1:exon
so has part: feature:6266692-6266776:1:exon
so has part: feature:6267364-6267491:1:exon
so has part: feature:6268261-6268372:1:exon
so has part: feature:6268578-6268702:1:exon

XP_019811460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6182614-6182681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6187041-6187120:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6190161-6190199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6235629-6235739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6236200-6236289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6236999-6237119:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6237208-6237369:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6238675-6238776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6239292-6239406:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6240487-6240603:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6240710-6240897:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6242687-6242798:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6244322-6244431:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6246801-6246936:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6252318-6252428:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6253038-6253203:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6253473-6253708:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6265676-6265792:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6266692-6266776:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6267364-6267491:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6268261-6268372:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6268578-6268702:1:exon

APLN
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: APLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6324283..6333194)
location: region:6324283-6333194:-1
so has part: feature:6324283-6333194:-1:exon
subclass of: SO_0000010

109555468
type: Gene
SIO_000068: ncbigene

position:6324283:-1
position: 6324283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6333194:-1
position: 6333194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6324283-6333194:-1:exon

APLN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: APLN
product: apelin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019956372.1
SIO_010081: APLN
subclass of: SO_0000673
so part of: APLN
location: complement(join(6324283..6326724,6327307..6327492,6333068..6333194))
location: region:6324283-6333194:-1
so has part: feature:6333068-6333194:-1:exon
so has part: feature:6327307-6327492:-1:exon
so has part: feature:6324283-6326724:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6333068-6333194:-1:exon

position:6333068:-1
position: 6333068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6327307-6327492:-1:exon

position:6327307:-1
position: 6327307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6327492:-1
position: 6327492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6324283-6326724:-1:exon

position:6326724:-1
position: 6326724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APLN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: APLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apelin
translation: MNLRRCVQALLLLWLCLSAVCGGPLLQTSDGKEMEEGTIRYLVQPRGPRSGPGPWQGGRRKFRRQRPRLSHKGPMPF
SIO_010081: APLN
subclass of: SO_0000673
so part of: APLN
location: complement(join(6327327..6327492,6333068..6333135))
location: region:6327327-6333135:-1
so has part: feature:6333068-6333135:-1:exon
so has part: feature:6327327-6327492:-1:exon

XP_019811931.1
type: Protein
SIO_000068: ncbiprotein

position:6327327:-1
position: 6327327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6333135:-1
position: 6333135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6333068-6333135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6327327-6327492:-1:exon

XPNPEP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: XPNPEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6412133..6439534
location: region:6412133-6439534:1
so has part: feature:6412133-6439534:1:exon
subclass of: SO_0000010

109555450
type: Gene
SIO_000068: ncbigene

position:6412133:1
position: 6412133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6439534:1
position: 6439534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6412133-6439534:1:exon

XPNPEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: XPNPEP2
product: X-prolyl aminopeptidase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_019956347.1
SIO_010081: XPNPEP2
subclass of: SO_0000673
so part of: XPNPEP2
location: join(6412133..6412451,6415619..6415689,6416995..6417105,6418508..6418571,6419313..6419417,6419622..6419708,6420733..6420879,6423532..6423633,6424281..6424362,6424645..6424840,6425613..6425702,6427436..6427545,6428251..6428328,6429400..6429471,6431719..6431779,6433045..6433114,6433558..6433662,6434111..6434170,6434422..6434498,6437064..6437153,6437428..6439534)
location: region:6412133-6439534:1
so has part: feature:6412133-6412451:1:exon
so has part: feature:6415619-6415689:1:exon
so has part: feature:6416995-6417105:1:exon
so has part: feature:6418508-6418571:1:exon
so has part: feature:6419313-6419417:1:exon
so has part: feature:6419622-6419708:1:exon
so has part: feature:6420733-6420879:1:exon
so has part: feature:6423532-6423633:1:exon
so has part: feature:6424281-6424362:1:exon
so has part: feature:6424645-6424840:1:exon
so has part: feature:6425613-6425702:1:exon
so has part: feature:6427436-6427545:1:exon
so has part: feature:6428251-6428328:1:exon
so has part: feature:6429400-6429471:1:exon
so has part: feature:6431719-6431779:1:exon
so has part: feature:6433045-6433114:1:exon
so has part: feature:6433558-6433662:1:exon
so has part: feature:6434111-6434170:1:exon
so has part: feature:6434422-6434498:1:exon
so has part: feature:6437064-6437153:1:exon
so has part: feature:6437428-6439534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6412133-6412451:1:exon

position:6412451:1
position: 6412451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6415619-6415689:1:exon

position:6415619:1
position: 6415619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6415689:1
position: 6415689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6416995-6417105:1:exon

position:6416995:1
position: 6416995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6417105:1
position: 6417105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6418508-6418571:1:exon

position:6418508:1
position: 6418508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6418571:1
position: 6418571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6419313-6419417:1:exon

position:6419313:1
position: 6419313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6419417:1
position: 6419417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6419622-6419708:1:exon

position:6419622:1
position: 6419622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6419708:1
position: 6419708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6420733-6420879:1:exon

position:6420733:1
position: 6420733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6420879:1
position: 6420879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6423532-6423633:1:exon

position:6423532:1
position: 6423532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6423633:1
position: 6423633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6424281-6424362:1:exon

position:6424281:1
position: 6424281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6424362:1
position: 6424362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6424645-6424840:1:exon

position:6424645:1
position: 6424645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6424840:1
position: 6424840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6425613-6425702:1:exon

position:6425613:1
position: 6425613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6425702:1
position: 6425702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6427436-6427545:1:exon

position:6427436:1
position: 6427436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6427545:1
position: 6427545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6428251-6428328:1:exon

position:6428251:1
position: 6428251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6428328:1
position: 6428328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6429400-6429471:1:exon

position:6429400:1
position: 6429400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6429471:1
position: 6429471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6431719-6431779:1:exon

position:6431719:1
position: 6431719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6431779:1
position: 6431779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6433045-6433114:1:exon

position:6433045:1
position: 6433045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6433114:1
position: 6433114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6433558-6433662:1:exon

position:6433558:1
position: 6433558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6433662:1
position: 6433662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6434111-6434170:1:exon

position:6434111:1
position: 6434111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6434170:1
position: 6434170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6434422-6434498:1:exon

position:6434422:1
position: 6434422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6434498:1
position: 6434498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6437064-6437153:1:exon

position:6437064:1
position: 6437064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6437153:1
position: 6437153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6437428-6439534:1:exon

position:6437428:1
position: 6437428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

XPNPEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: XPNPEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: xaa-Pro aminopeptidase 2
translation: MAWARWGGHPWLVLLCAYAWGHPKSLDQREDVRNCSSSPPYLPVTAVNTTAQLTALRQQMYTQNLSAYIVPDTDAHMSEYIGEYDQRRAWITGFTGSAGVAVVTMEKASLWTDSRYWTQAERQMDCNWELHKEVGTTPIVTWLLTEIPVGARVGVDPFLFSINSWESYDKALQDSDRELVSITVNLVDLVWGSERPPVPSEPIYALQEAFTGSTWQEKVAGIRSQMQKHHKAPTAVLLSALDETAWLFNLRGSDIPYNPFFYSYTLLTDSSIRLFANKSRFSSETLQYLNSSCTGPLCVQVEDYGQVRDSVQAYASGDVKVWIGTSYTSYGLYEVIPKEKLLEDTYSPVMVTKAVKNSKEQTLLRASHVRDAVAVIRYLVWLEKNVPQGTVDEFSGAEQLEKFRGEEEFFSGSSFETISASGLNAALAHYSPTKELHRKLSSDEIYLVDSGGQYWDGTTDITRTVHWGTPSAFQKEAYTRVLIGNIDLSRLVFPAATSGRMVEAFARKALWDVGLNYGHGTGHGIGNFLCVHEWPVGFQSSNIAMAKGMFTSIEPGYYLDGEFGIRLEDVALVVEAKTKYPGTYLTFEVVSLVPYDRNLIDVSLLSPEQLQYLNRYYQIIREKVGPELQRRQLQEEFSWLQWHTEPLTARAAPTASLAPLVTVSALAILGWSV
SIO_010081: XPNPEP2
subclass of: SO_0000673
so part of: XPNPEP2
location: join(6412403..6412451,6415619..6415689,6416995..6417105,6418508..6418571,6419313..6419417,6419622..6419708,6420733..6420879,6423532..6423633,6424281..6424362,6424645..6424840,6425613..6425702,6427436..6427545,6428251..6428328,6429400..6429471,6431719..6431779,6433045..6433114,6433558..6433662,6434111..6434170,6434422..6434498,6437064..6437153,6437428..6437622)
location: region:6412403-6437622:1
so has part: feature:6412403-6412451:1:exon
so has part: feature:6415619-6415689:1:exon
so has part: feature:6416995-6417105:1:exon
so has part: feature:6418508-6418571:1:exon
so has part: feature:6419313-6419417:1:exon
so has part: feature:6419622-6419708:1:exon
so has part: feature:6420733-6420879:1:exon
so has part: feature:6423532-6423633:1:exon
so has part: feature:6424281-6424362:1:exon
so has part: feature:6424645-6424840:1:exon
so has part: feature:6425613-6425702:1:exon
so has part: feature:6427436-6427545:1:exon
so has part: feature:6428251-6428328:1:exon
so has part: feature:6429400-6429471:1:exon
so has part: feature:6431719-6431779:1:exon
so has part: feature:6433045-6433114:1:exon
so has part: feature:6433558-6433662:1:exon
so has part: feature:6434111-6434170:1:exon
so has part: feature:6434422-6434498:1:exon
so has part: feature:6437064-6437153:1:exon
so has part: feature:6437428-6437622:1:exon

XP_019811906.1
type: Protein
SIO_000068: ncbiprotein

position:6412403:1
position: 6412403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6437622:1
position: 6437622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6412403-6412451:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6415619-6415689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6416995-6417105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6418508-6418571:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6419313-6419417:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6419622-6419708:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6420733-6420879:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6423532-6423633:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6424281-6424362:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6424645-6424840:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6425613-6425702:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6427436-6427545:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6428251-6428328:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6429400-6429471:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6431719-6431779:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6433045-6433114:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6433558-6433662:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6434111-6434170:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6434422-6434498:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6437064-6437153:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6437428-6437622:1:exon

LOC109555451
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555451
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6439742..6440195)
location: region:6439742-6440195:-1
so has part: feature:6439742-6440195:-1:exon

109555451
type: Gene
SIO_000068: ncbigene

position:6439742:-1
position: 6439742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6440195:-1
position: 6440195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6439742-6440195:-1:exon

LOC109555451
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: LOC109555451
product: uncharacterized protein C11orf98 homolog pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_002180272.1
SIO_010081: LOC109555451
so part of: LOC109555451
location: complement(6439742..6440195)
location: region:6439742-6440195:-1
so has part: feature:6439742-6440195:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6439742-6440195:-1:exon

SASH3
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: SASH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6447473..6466148
location: region:6447473-6466148:1
so has part: feature:6447473-6466148:1:exon
subclass of: SO_0000010

109554759
type: Gene
SIO_000068: ncbigene

position:6447473:1
position: 6447473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6466148:1
position: 6466148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6447473-6466148:1:exon

SASH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SASH3
product: SAM and SH3 domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019955396.1
SIO_010081: SASH3
subclass of: SO_0000673
so part of: SASH3
location: join(6447473..6447724,6455024..6455119,6455484..6455690,6457793..6457838,6459022..6459170,6459301..6459510,6459634..6459784,6460290..6466148)
location: region:6447473-6466148:1
so has part: feature:6447473-6447724:1:exon
so has part: feature:6455024-6455119:1:exon
so has part: feature:6455484-6455690:1:exon
so has part: feature:6457793-6457838:1:exon
so has part: feature:6459022-6459170:1:exon
so has part: feature:6459301-6459510:1:exon
so has part: feature:6459634-6459784:1:exon
so has part: feature:6460290-6466148:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6447473-6447724:1:exon

position:6447724:1
position: 6447724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6455024-6455119:1:exon

position:6455024:1
position: 6455024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6455119:1
position: 6455119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6455484-6455690:1:exon

position:6455484:1
position: 6455484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6455690:1
position: 6455690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6457793-6457838:1:exon

position:6457793:1
position: 6457793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6457838:1
position: 6457838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6459022-6459170:1:exon

position:6459022:1
position: 6459022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6459170:1
position: 6459170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6459301-6459510:1:exon

position:6459301:1
position: 6459301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6459510:1
position: 6459510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6459634-6459784:1:exon

position:6459634:1
position: 6459634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6459784:1
position: 6459784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6460290-6466148:1:exon

position:6460290:1
position: 6460290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SASH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SASH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAM and SH3 domain-containing protein 3
translation: MLRRKPSNASEKEPTQKKKLSLQRSSSFKDFAKSKPSSPVVSEKEFNLDDNIPEDESSVPTPEDAEKSGKKLGKKWRAVISRTMNRKTGKKMVKALSEEMVRPGTQVHRGLGRVPQGKAAQEERELPALSRQASTGSELCSPSPGSGNLGEESTAPQYTGPFCGRARVHTDFTPSPYDRDSLKLQKGDVIQIVEKPPVGTWLGLLNGRMGSFKFIYVDVLPEEAVGPARPSRRQSKGKRPKPKTLHELLERIGLEEHTSTLLLNGYQTLEDFKELRETHLNELNIMDPQHRAKLLTASELLLDYDTGSEEAEEGTESGQEPAVSTVADPKVDIPRDSGCFEGSESGRDEAELAGTEEQLHGLSLSGAP
SIO_010081: SASH3
subclass of: SO_0000673
so part of: SASH3
location: join(6447668..6447724,6455024..6455119,6455484..6455690,6457793..6457838,6459022..6459170,6459301..6459510,6459634..6459784,6460290..6460480)
location: region:6447668-6460480:1
so has part: feature:6447668-6447724:1:exon
so has part: feature:6455024-6455119:1:exon
so has part: feature:6455484-6455690:1:exon
so has part: feature:6457793-6457838:1:exon
so has part: feature:6459022-6459170:1:exon
so has part: feature:6459301-6459510:1:exon
so has part: feature:6459634-6459784:1:exon
so has part: feature:6460290-6460480:1:exon

XP_019810955.1
type: Protein
SIO_000068: ncbiprotein

position:6447668:1
position: 6447668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6460480:1
position: 6460480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6447668-6447724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6455024-6455119:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6455484-6455690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6457793-6457838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6459022-6459170:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6459301-6459510:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6459634-6459784:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6460290-6460480:1:exon

ZDHHC9
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ZDHHC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6470856..6500692)
location: region:6470856-6500692:-1
so has part: feature:6470856-6500692:-1:exon
subclass of: SO_0000010

109555351
type: Gene
SIO_000068: ncbigene

position:6470856:-1
position: 6470856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6500692:-1
position: 6500692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6470856-6500692:-1:exon

ZDHHC9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZDHHC9
product: zinc finger DHHC-type containing 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 82 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 165 samples with support for all annotated introns
transcript id: XM_019956163.1
SIO_010081: ZDHHC9
subclass of: SO_0000673
so part of: ZDHHC9
location: complement(join(6470856..6472421,6475467..6475563,6475959..6476062,6477243..6477345,6478101..6478149,6479052..6479189,6483986..6484144,6488074..6488234,6498599..6498899,6500075..6500140,6500486..6500692))
location: region:6470856-6500692:-1
so has part: feature:6500486-6500692:-1:exon
so has part: feature:6500075-6500140:-1:exon
so has part: feature:6498599-6498899:-1:exon
so has part: feature:6488074-6488234:-1:exon
so has part: feature:6483986-6484144:-1:exon
so has part: feature:6479052-6479189:-1:exon
so has part: feature:6478101-6478149:-1:exon
so has part: feature:6477243-6477345:-1:exon
so has part: feature:6475959-6476062:-1:exon
so has part: feature:6475467-6475563:-1:exon
so has part: feature:6470856-6472421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6500486-6500692:-1:exon

position:6500486:-1
position: 6500486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6500075-6500140:-1:exon

position:6500075:-1
position: 6500075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6500140:-1
position: 6500140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6498599-6498899:-1:exon

position:6498599:-1
position: 6498599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6498899:-1
position: 6498899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6488074-6488234:-1:exon

position:6488074:-1
position: 6488074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6488234:-1
position: 6488234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6483986-6484144:-1:exon

position:6483986:-1
position: 6483986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6484144:-1
position: 6484144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6479052-6479189:-1:exon

position:6479052:-1
position: 6479052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6479189:-1
position: 6479189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6478101-6478149:-1:exon

position:6478101:-1
position: 6478101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6478149:-1
position: 6478149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6477243-6477345:-1:exon

position:6477243:-1
position: 6477243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6477345:-1
position: 6477345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6475959-6476062:-1:exon

position:6475959:-1
position: 6475959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6476062:-1
position: 6476062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6475467-6475563:-1:exon

position:6475467:-1
position: 6475467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6475563:-1
position: 6475563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6470856-6472421:-1:exon

position:6472421:-1
position: 6472421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZDHHC9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZDHHC9
product: zinc finger DHHC-type containing 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 204 samples with support for all annotated introns
transcript id: XM_019956165.1
SIO_010081: ZDHHC9
subclass of: SO_0000673
so part of: ZDHHC9
location: complement(join(6470856..6472421,6475467..6475563,6475959..6476062,6477243..6477345,6478101..6478149,6479052..6479189,6483986..6484144,6488074..6488234,6498599..6498899,6500486..6500680))
location: region:6470856-6500680:-1
so has part: feature:6500486-6500680:-1:exon
so has part: feature:6498599-6498899:-1:exon
so has part: feature:6488074-6488234:-1:exon
so has part: feature:6483986-6484144:-1:exon
so has part: feature:6479052-6479189:-1:exon
so has part: feature:6478101-6478149:-1:exon
so has part: feature:6477243-6477345:-1:exon
so has part: feature:6475959-6476062:-1:exon
so has part: feature:6475467-6475563:-1:exon
so has part: feature:6470856-6472421:-1:exon

position:6500680:-1
position: 6500680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6500486-6500680:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6498599-6498899:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6488074-6488234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6483986-6484144:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6479052-6479189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6478101-6478149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6477243-6477345:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6475959-6476062:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6475467-6475563:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6470856-6472421:-1:exon

ZDHHC9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZDHHC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC9
translation: MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRGILPLEESGSRPPSTQEASTSLLPQGPAPIDHLSNEMPEDTSTPEEMPPPEPPEPPQEVTEAEK
SIO_010081: ZDHHC9
subclass of: SO_0000673
so part of: ZDHHC9
location: complement(join(6472308..6472421,6475467..6475563,6475959..6476062,6477243..6477345,6478101..6478149,6479052..6479189,6483986..6484144,6488074..6488234,6498599..6498765))
location: region:6472308-6498765:-1
so has part: feature:6498599-6498765:-1:exon
so has part: feature:6488074-6488234:-1:exon
so has part: feature:6483986-6484144:-1:exon
so has part: feature:6479052-6479189:-1:exon
so has part: feature:6478101-6478149:-1:exon
so has part: feature:6477243-6477345:-1:exon
so has part: feature:6475959-6476062:-1:exon
so has part: feature:6475467-6475563:-1:exon
so has part: feature:6472308-6472421:-1:exon

XP_019811722.1
type: Protein
SIO_000068: ncbiprotein

position:6472308:-1
position: 6472308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6498765:-1
position: 6498765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6498599-6498765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6488074-6488234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6483986-6484144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6479052-6479189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6478101-6478149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6477243-6477345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6475959-6476062:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6475467-6475563:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6472308-6472421:-1:exon

ZDHHC9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZDHHC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC9
translation: MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRGILPLEESGSRPPSTQEASTSLLPQGPAPIDHLSNEMPEDTSTPEEMPPPEPPEPPQEVTEAEK
SIO_010081: ZDHHC9
subclass of: SO_0000673
so part of: ZDHHC9
location: complement(join(6472308..6472421,6475467..6475563,6475959..6476062,6477243..6477345,6478101..6478149,6479052..6479189,6483986..6484144,6488074..6488234,6498599..6498765))
location: region:6472308-6498765:-1
so has part: feature:6498599-6498765:-1:exon
so has part: feature:6488074-6488234:-1:exon
so has part: feature:6483986-6484144:-1:exon
so has part: feature:6479052-6479189:-1:exon
so has part: feature:6478101-6478149:-1:exon
so has part: feature:6477243-6477345:-1:exon
so has part: feature:6475959-6476062:-1:exon
so has part: feature:6475467-6475563:-1:exon
so has part: feature:6472308-6472421:-1:exon

XP_019811724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6498599-6498765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6488074-6488234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6483986-6484144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6479052-6479189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6478101-6478149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6477243-6477345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6475959-6476062:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6475467-6475563:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6472308-6472421:-1:exon

LOC109555119
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6527200..6527936
location: region:6527200-6527936:1
so has part: feature:6527200-6527936:1:exon
subclass of: SO_0000010

109555119
type: Gene
SIO_000068: ncbigene

position:6527200:1
position: 6527200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6527936:1
position: 6527936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6527200-6527936:1:exon

LOC109555119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109555119
product: coiled-coil domain-containing protein 169-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins
transcript id: XM_019955695.1
SIO_010081: LOC109555119
subclass of: SO_0000673
so part of: LOC109555119
location: 6527200..6527936
location: region:6527200-6527936:1
so has part: feature:6527200-6527936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6527200-6527936:1:exon

LOC109555119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109555119
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: coiled-coil domain-containing protein 169-like
translation: MGDRGGDRFEGMSTDCLKLELLEEIHMKDLVQISILELRQKIVELEDKLNSNYEGSEWKARYEAQLELNDHLQKQIASLREKVEKIRGNPSDRLSSIRVYERMSVESLSTLLKQLEKEKRRLESQVRECALRLERESTLTARXEDEHRMYLAKMSQLSDSPQSSKGQPVNLHRMKEDPVKIGRSNPANQKMVNAKRGPEKKITRSNHLPKLNP
SIO_010081: LOC109555119
subclass of: SO_0000673
so part of: LOC109555119
location: 6527297..6527936
location: region:6527297-6527936:1
so has part: feature:6527297-6527936:1:exon

XP_019811254.1
type: Protein
SIO_000068: ncbiprotein

position:6527297:1
position: 6527297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6527297-6527936:1:exon

UTP14A
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: UTP14A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6556591..6573198
location: region:6556591-6573198:1
so has part: feature:6556591-6573198:1:exon
subclass of: SO_0000010

109555295
type: Gene
SIO_000068: ncbigene

position:6556591:1
position: 6556591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6573198:1
position: 6573198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6556591-6573198:1:exon

UTP14A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: UTP14A
product: UTP14A small subunit processome component
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 108 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 257 samples with support for all annotated introns
transcript id: XM_019956060.1
SIO_010081: UTP14A
subclass of: SO_0000673
so part of: UTP14A
location: join(6556591..6556695,6557631..6557709,6558546..6558616,6559092..6559156,6560865..6561007,6561302..6561457,6565853..6565972,6566071..6566165,6566751..6566874,6566957..6567034,6567499..6567889,6569667..6570064,6570777..6570970,6571100..6571199,6572760..6573198)
location: region:6556591-6573198:1
so has part: feature:6556591-6556695:1:exon
so has part: feature:6557631-6557709:1:exon
so has part: feature:6558546-6558616:1:exon
so has part: feature:6559092-6559156:1:exon
so has part: feature:6560865-6561007:1:exon
so has part: feature:6561302-6561457:1:exon
so has part: feature:6565853-6565972:1:exon
so has part: feature:6566071-6566165:1:exon
so has part: feature:6566751-6566874:1:exon
so has part: feature:6566957-6567034:1:exon
so has part: feature:6567499-6567889:1:exon
so has part: feature:6569667-6570064:1:exon
so has part: feature:6570777-6570970:1:exon
so has part: feature:6571100-6571199:1:exon
so has part: feature:6572760-6573198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6556591-6556695:1:exon

position:6556695:1
position: 6556695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6557631-6557709:1:exon

position:6557631:1
position: 6557631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6557709:1
position: 6557709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6558546-6558616:1:exon

position:6558546:1
position: 6558546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6558616:1
position: 6558616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6559092-6559156:1:exon

position:6559092:1
position: 6559092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6559156:1
position: 6559156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6560865-6561007:1:exon

position:6560865:1
position: 6560865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6561007:1
position: 6561007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6561302-6561457:1:exon

position:6561302:1
position: 6561302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6561457:1
position: 6561457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6565853-6565972:1:exon

position:6565853:1
position: 6565853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6565972:1
position: 6565972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6566071-6566165:1:exon

position:6566071:1
position: 6566071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6566165:1
position: 6566165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6566751-6566874:1:exon

position:6566751:1
position: 6566751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6566874:1
position: 6566874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6566957-6567034:1:exon

position:6566957:1
position: 6566957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6567034:1
position: 6567034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6567499-6567889:1:exon

position:6567499:1
position: 6567499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6567889:1
position: 6567889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6569667-6570064:1:exon

position:6569667:1
position: 6569667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6570064:1
position: 6570064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6570777-6570970:1:exon

position:6570777:1
position: 6570777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6570970:1
position: 6570970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6571100-6571199:1:exon

position:6571100:1
position: 6571100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6571199:1
position: 6571199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6572760-6573198:1:exon

position:6572760:1
position: 6572760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UTP14A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: UTP14A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar RNA-associated protein 14 homolog A
translation: MNANQAAESNLLASNQQKELEDLPKDYPLSTSEDEGDKDEERKHQKLLESISSLNGKDRQKLADRSEASLKVSEFSVSSEGSGGKLVLSDLLEPVKTSSSLAAVKKQLNRVKSKKTVELPLHREEIERIHREVAFNKSSQILSKWDPVVLKNRQAEQLVFPLSKPQSAFAPIEHVVNGWKAGTPLEQEIFNLLHKNKQPVTDPLLTPVEKASLKAMSLEEVKMRRAELQRARALQSYYEARARREKRIKSKKYHRILKKGKAKQALKDFEKLQKVNPAAALEELEKLDKARMMERMSLKHQNSGKWAKSKAIMAKYDLEARQAMQEQLARNKELTQKVRAASESEEEGEGQEEEEEPLVPDLVNEVQIKANGLNPWMFRNHFIDAKEAEVQKDLEDPAEPEAQETSESEEEKAVVEEETLLKEFEERRSLRQKSELNHMAEPVHRRVTKDPSSQEVLSDLRALCQKLSTENHQSGKQELSSARTAQREEPAREEEEPMLLQRPERARTLDELEELGREGCVENEELPRTAVEGLQLEKNLSNHIGAPKEKKRKEQMIDLQNLLTTKSPSVKSLAVPTTVQELEDEEERDQRQXIKEAFAGDDVIRDFLKEKREAVEASKPKDLDLTLPGWGEWGGIGLKPSAKKRRRFLIKAPEGPPRKDKNLPNVIINEKRNTHAAAHQVQVLPHPFTHHQQFERTIQTPVGSTWNTQRAFQKLTMPKVVTKPGHIIKPIKAEDVGYRSSSRSDLSVVQRNPKRLSIRHKKHLENNCVD
SIO_010081: UTP14A
subclass of: SO_0000673
so part of: UTP14A
location: join(6556670..6556695,6557631..6557709,6558546..6558616,6559092..6559156,6560865..6561007,6561302..6561457,6565853..6565972,6566071..6566165,6566751..6566874,6566957..6567034,6567499..6567889,6569667..6570064,6570777..6570970,6571100..6571199,6572760..6573032)
location: region:6556670-6573032:1
so has part: feature:6556670-6556695:1:exon
so has part: feature:6557631-6557709:1:exon
so has part: feature:6558546-6558616:1:exon
so has part: feature:6559092-6559156:1:exon
so has part: feature:6560865-6561007:1:exon
so has part: feature:6561302-6561457:1:exon
so has part: feature:6565853-6565972:1:exon
so has part: feature:6566071-6566165:1:exon
so has part: feature:6566751-6566874:1:exon
so has part: feature:6566957-6567034:1:exon
so has part: feature:6567499-6567889:1:exon
so has part: feature:6569667-6570064:1:exon
so has part: feature:6570777-6570970:1:exon
so has part: feature:6571100-6571199:1:exon
so has part: feature:6572760-6573032:1:exon

XP_019811619.1
type: Protein
SIO_000068: ncbiprotein

position:6556670:1
position: 6556670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6573032:1
position: 6573032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6556670-6556695:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6557631-6557709:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6558546-6558616:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6559092-6559156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6560865-6561007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6561302-6561457:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6565853-6565972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6566071-6566165:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6566751-6566874:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6566957-6567034:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6567499-6567889:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6569667-6570064:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6570777-6570970:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6571100-6571199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6572760-6573032:1:exon

BCORL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: BCORL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6613267..6671484
location: region:6613267-6671484:1
so has part: feature:6613267-6671484:1:exon
subclass of: SO_0000010

109555328
type: Gene
SIO_000068: ncbigene

position:6613267:1
position: 6613267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6671484:1
position: 6671484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6613267-6671484:1:exon

BCORL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BCORL1
product: BCL6 corepressor-like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_019956124.1
SIO_010081: BCORL1
subclass of: SO_0000673
so part of: BCORL1
location: join(6613267..6613379,6614668..6614747,6629988..6630117,6634804..6634891,6635160..6638435,6642208..6642373,6643637..6643717,6645794..6646183,6650174..6650397,6654849..6655070,6657154..6657320,6658070..6658215,6664670..6664747,6665747..6665900,6669228..6671484)
location: region:6613267-6671484:1
so has part: feature:6613267-6613379:1:exon
so has part: feature:6614668-6614747:1:exon
so has part: feature:6629988-6630117:1:exon
so has part: feature:6634804-6634891:1:exon
so has part: feature:6635160-6638435:1:exon
so has part: feature:6642208-6642373:1:exon
so has part: feature:6643637-6643717:1:exon
so has part: feature:6645794-6646183:1:exon
so has part: feature:6650174-6650397:1:exon
so has part: feature:6654849-6655070:1:exon
so has part: feature:6657154-6657320:1:exon
so has part: feature:6658070-6658215:1:exon
so has part: feature:6664670-6664747:1:exon
so has part: feature:6665747-6665900:1:exon
so has part: feature:6669228-6671484:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6613267-6613379:1:exon

position:6613379:1
position: 6613379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6614668-6614747:1:exon

position:6614668:1
position: 6614668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6614747:1
position: 6614747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6629988-6630117:1:exon

position:6629988:1
position: 6629988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6630117:1
position: 6630117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6634804-6634891:1:exon

position:6634804:1
position: 6634804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6634891:1
position: 6634891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6635160-6638435:1:exon

position:6635160:1
position: 6635160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6638435:1
position: 6638435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6642208-6642373:1:exon

position:6642208:1
position: 6642208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6642373:1
position: 6642373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6643637-6643717:1:exon

position:6643637:1
position: 6643637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6643717:1
position: 6643717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6645794-6646183:1:exon

position:6645794:1
position: 6645794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6646183:1
position: 6646183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6650174-6650397:1:exon

position:6650174:1
position: 6650174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6650397:1
position: 6650397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6654849-6655070:1:exon

position:6654849:1
position: 6654849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6655070:1
position: 6655070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6657154-6657320:1:exon

position:6657154:1
position: 6657154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6657320:1
position: 6657320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6658070-6658215:1:exon

position:6658070:1
position: 6658070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6658215:1
position: 6658215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6664670-6664747:1:exon

position:6664670:1
position: 6664670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6664747:1
position: 6664747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6665747-6665900:1:exon

position:6665747:1
position: 6665747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6665900:1
position: 6665900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6669228-6671484:1:exon

position:6669228:1
position: 6669228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BCORL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BCORL1
product: BCL6 corepressor-like 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019956128.1
SIO_010081: BCORL1
subclass of: SO_0000673
so part of: BCORL1
location: join(6613267..6613379,6614668..6614747,6634804..6634891,6635160..6638435,6642208..6642373,6643637..6643717,6645794..6646183,6650174..6650397,6654849..6655070,6657154..6657320,6658070..6658215,6664670..6664747,6665747..6665900,6669228..6671261)
location: region:6613267-6671261:1
so has part: feature:6613267-6613379:1:exon
so has part: feature:6614668-6614747:1:exon
so has part: feature:6634804-6634891:1:exon
so has part: feature:6635160-6638435:1:exon
so has part: feature:6642208-6642373:1:exon
so has part: feature:6643637-6643717:1:exon
so has part: feature:6645794-6646183:1:exon
so has part: feature:6650174-6650397:1:exon
so has part: feature:6654849-6655070:1:exon
so has part: feature:6657154-6657320:1:exon
so has part: feature:6658070-6658215:1:exon
so has part: feature:6664670-6664747:1:exon
so has part: feature:6665747-6665900:1:exon
so has part: feature:6669228-6671261:1:exon

position:6671261:1
position: 6671261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6613267-6613379:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6614668-6614747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6634804-6634891:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6635160-6638435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6642208-6642373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6643637-6643717:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6645794-6646183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6650174-6650397:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6654849-6655070:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6657154-6657320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6658070-6658215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6664670-6664747:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6665747-6665900:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6669228-6671261:1:exon

BCORL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BCORL1
product: BCL6 corepressor-like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_019956126.1
SIO_010081: BCORL1
subclass of: SO_0000673
so part of: BCORL1
location: join(6613973..6614101,6614668..6614747,6629988..6630117,6634804..6634891,6635160..6638435,6642208..6642373,6643637..6643717,6645794..6646183,6650174..6650397,6654849..6655070,6657154..6657320,6658070..6658215,6664670..6664747,6665747..6665900,6669228..6671484)
location: region:6613973-6671484:1
so has part: feature:6613973-6614101:1:exon
so has part: feature:6614668-6614747:1:exon
so has part: feature:6629988-6630117:1:exon
so has part: feature:6634804-6634891:1:exon
so has part: feature:6635160-6638435:1:exon
so has part: feature:6642208-6642373:1:exon
so has part: feature:6643637-6643717:1:exon
so has part: feature:6645794-6646183:1:exon
so has part: feature:6650174-6650397:1:exon
so has part: feature:6654849-6655070:1:exon
so has part: feature:6657154-6657320:1:exon
so has part: feature:6658070-6658215:1:exon
so has part: feature:6664670-6664747:1:exon
so has part: feature:6665747-6665900:1:exon
so has part: feature:6669228-6671484:1:exon

position:6613973:1
position: 6613973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6613973-6614101:1:exon

position:6614101:1
position: 6614101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6614668-6614747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6629988-6630117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6634804-6634891:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6635160-6638435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6642208-6642373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6643637-6643717:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6645794-6646183:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6650174-6650397:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6654849-6655070:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6657154-6657320:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6658070-6658215:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6664670-6664747:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6665747-6665900:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6669228-6671484:1:exon

BCORL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BCORL1
product: BCL6 corepressor-like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_019956127.1
SIO_010081: BCORL1
subclass of: SO_0000673
so part of: BCORL1
location: join(6615570..6615749,6629988..6630117,6634804..6634891,6635160..6638435,6642208..6642373,6643637..6643717,6645794..6646183,6650174..6650397,6654849..6655070,6657154..6657320,6658070..6658215,6664670..6664747,6665747..6665900,6669228..6671484)
location: region:6615570-6671484:1
so has part: feature:6615570-6615749:1:exon
so has part: feature:6629988-6630117:1:exon
so has part: feature:6634804-6634891:1:exon
so has part: feature:6635160-6638435:1:exon
so has part: feature:6642208-6642373:1:exon
so has part: feature:6643637-6643717:1:exon
so has part: feature:6645794-6646183:1:exon
so has part: feature:6650174-6650397:1:exon
so has part: feature:6654849-6655070:1:exon
so has part: feature:6657154-6657320:1:exon
so has part: feature:6658070-6658215:1:exon
so has part: feature:6664670-6664747:1:exon
so has part: feature:6665747-6665900:1:exon
so has part: feature:6669228-6671484:1:exon

position:6615570:1
position: 6615570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6615570-6615749:1:exon

position:6615749:1
position: 6615749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6629988-6630117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6634804-6634891:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6635160-6638435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6642208-6642373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6643637-6643717:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6645794-6646183:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6650174-6650397:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6654849-6655070:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6657154-6657320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6658070-6658215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6664670-6664747:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6665747-6665900:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6669228-6671484:1:exon

BCORL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: BCORL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL-6 corepressor-like protein 1 isoform X1
translation: MISTAPLYSGVHNWTSSDRIRMCGINEERRAPLSDEESTTGDCQRFGSQEFCVSSFSKVELTTVGSGSNARGADPDGSATEKLGPKSEDRPDDAQPQMDYTGSVAETGGPLVSLSSPGDGLKLSAPDGPEAGNDTADCSWTPLSSQMSKQVDCSPAGAKALDSRHGVGEKNTFILATLGTGVPVEGTLPLVTTNFSPLPAPICPPAPSSASVPPSVPDPFQVXXXXPAPVPHSGLVPVQVAASVPAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPMSAPAPTPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPAVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPPATPTAIPTSAPIPASFSLSRVCFPAAQAPAMQKVPLSFQPGTVLTPSQPLVYIPPPSCGQPLSVATLPTTLGVSSTLTLPVLPSYLQDRCLPGVLASPELRSYPYAFSVARPLTSESKLVSLEVNRLPCASPSGSTSTQPAPDGVPGPLADTSLSTASAKVLPPPQPLLPAPSGSSAPPHPTKMPGSVEQQTEGTSVTFSPLKSPPQLEREMASPPECSEMPLDLSSKSNRQKLPLPNQRKTPPMPVLTPVHTSSKALLSTVLSRSQRTTQAAGSSVTSCLGSTSSPFVIFPEIVRNGDPSTWVKNSTALISTIPGTYVGVANPVPASLLLNKDPNLGLTRDPRHLPKQEPISIIDQGEPKGTGAPCGKKSSQAGTEGPPSTVKRYTPARIAPGLPGCQSKELSLWKPTGPANIYPRCSVNGKPTSTQVLPVGWSPYHQASLLSIGISSAGQLTPSQGVPIRPTSVVSEFSGVPSLGPSEAMHGLPEGQPPRPGGPFAPEQDTGTKNKTCRIAAKPYEEQVNPVLLTLSPQTGTLALSVQPSSGDLRVTQGPGEPESHLCPDSTPKLEGPQGACGLKLAGETKPKNQVLATYMSHELVLATPQNLHKMPELPLLPHDSRPKELILDVVPSSARAASTELPQLGSQVDLGRVKMEKVDGDVVFNLATCFRADGLPAATPRGQVEVRSKAGQARVKQESIGVFACKNKWQPDSVVSDGASESPPPKKMKCGKEKDGEEQQPQAKVLVRSSHGPKCRKPPSDPQEPTKKSPRGAPDSGKEHNGVRVKHKHRKPTKPESQSPGKRADGHEEGSLEKKAKSSFRDFIPVVLSTRTRSQSGSICSSFAGMADSDMGCQEVFPTEEEEEVTPTPAKRRKVRKTQRDTQYRSHHAQDKTLLSQGRRHLWRAREMPWRTEAARQMWDTNEEEEEDEEEGLVKRKKRRRQKSRKYQTGEYLTEQEEEQRRKGRADLKARKQKTSSQSPEHRLRNRNLLLPNKAQGISDSPNGFLPNNLEEPACLENSEKPSGKRKCKTKHMVTVSEDAKSKGRWSQQKTRPPKSPTPAKPTEPCTPSKSRSAGPEEASESPTARQIPPEARRLIVNKNAGETLLQRAARLGYKDVVLYCLQKDSEDVNHRDNAGYTALHEACSRGWTDILNILLEHGANVNCSAQDGTRPVHDAVVNDNLETIWLLLSYGADPTLATYXXXXAMKLASSDTMKRFLSDHLSDLQGRAEGDPGVSWDFYSSSVLEEKDGFACDLLHNPPGSSDQEGDDVEEDNFMFELSDKPLLPCYNLQVSVSRGPCNWFLFTDVLKRLKLSSRIFQARFPHFEIATLPKAEFYRQVASSQLLTPAERPGGVDGTSAPGSSETVELVRYEVELLRLLGSEVEFQPWNS
SIO_010081: BCORL1
subclass of: SO_0000673
so part of: BCORL1
location: join(6630032..6630117,6634804..6634891,6635160..6638435,6642208..6642373,6643637..6643717,6645794..6646183,6650174..6650397,6654849..6655070,6657154..6657320,6658070..6658215,6664670..6664747,6665747..6665900,6669228..6669510)
location: region:6630032-6669510:1
so has part: feature:6630032-6630117:1:exon
so has part: feature:6634804-6634891:1:exon
so has part: feature:6635160-6638435:1:exon
so has part: feature:6642208-6642373:1:exon
so has part: feature:6643637-6643717:1:exon
so has part: feature:6645794-6646183:1:exon
so has part: feature:6650174-6650397:1:exon
so has part: feature:6654849-6655070:1:exon
so has part: feature:6657154-6657320:1:exon
so has part: feature:6658070-6658215:1:exon
so has part: feature:6664670-6664747:1:exon
so has part: feature:6665747-6665900:1:exon
so has part: feature:6669228-6669510:1:exon

XP_019811683.1
type: Protein
SIO_000068: ncbiprotein

position:6630032:1
position: 6630032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6669510:1
position: 6669510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6630032-6630117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6634804-6634891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6635160-6638435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6642208-6642373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6643637-6643717:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6645794-6646183:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6650174-6650397:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6654849-6655070:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6657154-6657320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6658070-6658215:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6664670-6664747:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6665747-6665900:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6669228-6669510:1:exon

BCORL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: BCORL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL-6 corepressor-like protein 1 isoform X1
translation: MISTAPLYSGVHNWTSSDRIRMCGINEERRAPLSDEESTTGDCQRFGSQEFCVSSFSKVELTTVGSGSNARGADPDGSATEKLGPKSEDRPDDAQPQMDYTGSVAETGGPLVSLSSPGDGLKLSAPDGPEAGNDTADCSWTPLSSQMSKQVDCSPAGAKALDSRHGVGEKNTFILATLGTGVPVEGTLPLVTTNFSPLPAPICPPAPSSASVPPSVPDPFQVXXXXPAPVPHSGLVPVQVAASVPAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPMSAPAPTPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPAVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPPATPTAIPTSAPIPASFSLSRVCFPAAQAPAMQKVPLSFQPGTVLTPSQPLVYIPPPSCGQPLSVATLPTTLGVSSTLTLPVLPSYLQDRCLPGVLASPELRSYPYAFSVARPLTSESKLVSLEVNRLPCASPSGSTSTQPAPDGVPGPLADTSLSTASAKVLPPPQPLLPAPSGSSAPPHPTKMPGSVEQQTEGTSVTFSPLKSPPQLEREMASPPECSEMPLDLSSKSNRQKLPLPNQRKTPPMPVLTPVHTSSKALLSTVLSRSQRTTQAAGSSVTSCLGSTSSPFVIFPEIVRNGDPSTWVKNSTALISTIPGTYVGVANPVPASLLLNKDPNLGLTRDPRHLPKQEPISIIDQGEPKGTGAPCGKKSSQAGTEGPPSTVKRYTPARIAPGLPGCQSKELSLWKPTGPANIYPRCSVNGKPTSTQVLPVGWSPYHQASLLSIGISSAGQLTPSQGVPIRPTSVVSEFSGVPSLGPSEAMHGLPEGQPPRPGGPFAPEQDTGTKNKTCRIAAKPYEEQVNPVLLTLSPQTGTLALSVQPSSGDLRVTQGPGEPESHLCPDSTPKLEGPQGACGLKLAGETKPKNQVLATYMSHELVLATPQNLHKMPELPLLPHDSRPKELILDVVPSSARAASTELPQLGSQVDLGRVKMEKVDGDVVFNLATCFRADGLPAATPRGQVEVRSKAGQARVKQESIGVFACKNKWQPDSVVSDGASESPPPKKMKCGKEKDGEEQQPQAKVLVRSSHGPKCRKPPSDPQEPTKKSPRGAPDSGKEHNGVRVKHKHRKPTKPESQSPGKRADGHEEGSLEKKAKSSFRDFIPVVLSTRTRSQSGSICSSFAGMADSDMGCQEVFPTEEEEEVTPTPAKRRKVRKTQRDTQYRSHHAQDKTLLSQGRRHLWRAREMPWRTEAARQMWDTNEEEEEDEEEGLVKRKKRRRQKSRKYQTGEYLTEQEEEQRRKGRADLKARKQKTSSQSPEHRLRNRNLLLPNKAQGISDSPNGFLPNNLEEPACLENSEKPSGKRKCKTKHMVTVSEDAKSKGRWSQQKTRPPKSPTPAKPTEPCTPSKSRSAGPEEASESPTARQIPPEARRLIVNKNAGETLLQRAARLGYKDVVLYCLQKDSEDVNHRDNAGYTALHEACSRGWTDILNILLEHGANVNCSAQDGTRPVHDAVVNDNLETIWLLLSYGADPTLATYXXXXAMKLASSDTMKRFLSDHLSDLQGRAEGDPGVSWDFYSSSVLEEKDGFACDLLHNPPGSSDQEGDDVEEDNFMFELSDKPLLPCYNLQVSVSRGPCNWFLFTDVLKRLKLSSRIFQARFPHFEIATLPKAEFYRQVASSQLLTPAERPGGVDGTSAPGSSETVELVRYEVELLRLLGSEVEFQPWNS
SIO_010081: BCORL1
subclass of: SO_0000673
so part of: BCORL1
location: join(6630032..6630117,6634804..6634891,6635160..6638435,6642208..6642373,6643637..6643717,6645794..6646183,6650174..6650397,6654849..6655070,6657154..6657320,6658070..6658215,6664670..6664747,6665747..6665900,6669228..6669510)
location: region:6630032-6669510:1
so has part: feature:6630032-6630117:1:exon
so has part: feature:6634804-6634891:1:exon
so has part: feature:6635160-6638435:1:exon
so has part: feature:6642208-6642373:1:exon
so has part: feature:6643637-6643717:1:exon
so has part: feature:6645794-6646183:1:exon
so has part: feature:6650174-6650397:1:exon
so has part: feature:6654849-6655070:1:exon
so has part: feature:6657154-6657320:1:exon
so has part: feature:6658070-6658215:1:exon
so has part: feature:6664670-6664747:1:exon
so has part: feature:6665747-6665900:1:exon
so has part: feature:6669228-6669510:1:exon

XP_019811685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6630032-6630117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6634804-6634891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6635160-6638435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6642208-6642373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6643637-6643717:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6645794-6646183:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6650174-6650397:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6654849-6655070:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6657154-6657320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6658070-6658215:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6664670-6664747:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6665747-6665900:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6669228-6669510:1:exon

BCORL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: BCORL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL-6 corepressor-like protein 1 isoform X1
translation: MISTAPLYSGVHNWTSSDRIRMCGINEERRAPLSDEESTTGDCQRFGSQEFCVSSFSKVELTTVGSGSNARGADPDGSATEKLGPKSEDRPDDAQPQMDYTGSVAETGGPLVSLSSPGDGLKLSAPDGPEAGNDTADCSWTPLSSQMSKQVDCSPAGAKALDSRHGVGEKNTFILATLGTGVPVEGTLPLVTTNFSPLPAPICPPAPSSASVPPSVPDPFQVXXXXPAPVPHSGLVPVQVAASVPAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPMSAPAPTPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPAVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPPATPTAIPTSAPIPASFSLSRVCFPAAQAPAMQKVPLSFQPGTVLTPSQPLVYIPPPSCGQPLSVATLPTTLGVSSTLTLPVLPSYLQDRCLPGVLASPELRSYPYAFSVARPLTSESKLVSLEVNRLPCASPSGSTSTQPAPDGVPGPLADTSLSTASAKVLPPPQPLLPAPSGSSAPPHPTKMPGSVEQQTEGTSVTFSPLKSPPQLEREMASPPECSEMPLDLSSKSNRQKLPLPNQRKTPPMPVLTPVHTSSKALLSTVLSRSQRTTQAAGSSVTSCLGSTSSPFVIFPEIVRNGDPSTWVKNSTALISTIPGTYVGVANPVPASLLLNKDPNLGLTRDPRHLPKQEPISIIDQGEPKGTGAPCGKKSSQAGTEGPPSTVKRYTPARIAPGLPGCQSKELSLWKPTGPANIYPRCSVNGKPTSTQVLPVGWSPYHQASLLSIGISSAGQLTPSQGVPIRPTSVVSEFSGVPSLGPSEAMHGLPEGQPPRPGGPFAPEQDTGTKNKTCRIAAKPYEEQVNPVLLTLSPQTGTLALSVQPSSGDLRVTQGPGEPESHLCPDSTPKLEGPQGACGLKLAGETKPKNQVLATYMSHELVLATPQNLHKMPELPLLPHDSRPKELILDVVPSSARAASTELPQLGSQVDLGRVKMEKVDGDVVFNLATCFRADGLPAATPRGQVEVRSKAGQARVKQESIGVFACKNKWQPDSVVSDGASESPPPKKMKCGKEKDGEEQQPQAKVLVRSSHGPKCRKPPSDPQEPTKKSPRGAPDSGKEHNGVRVKHKHRKPTKPESQSPGKRADGHEEGSLEKKAKSSFRDFIPVVLSTRTRSQSGSICSSFAGMADSDMGCQEVFPTEEEEEVTPTPAKRRKVRKTQRDTQYRSHHAQDKTLLSQGRRHLWRAREMPWRTEAARQMWDTNEEEEEDEEEGLVKRKKRRRQKSRKYQTGEYLTEQEEEQRRKGRADLKARKQKTSSQSPEHRLRNRNLLLPNKAQGISDSPNGFLPNNLEEPACLENSEKPSGKRKCKTKHMVTVSEDAKSKGRWSQQKTRPPKSPTPAKPTEPCTPSKSRSAGPEEASESPTARQIPPEARRLIVNKNAGETLLQRAARLGYKDVVLYCLQKDSEDVNHRDNAGYTALHEACSRGWTDILNILLEHGANVNCSAQDGTRPVHDAVVNDNLETIWLLLSYGADPTLATYXXXXAMKLASSDTMKRFLSDHLSDLQGRAEGDPGVSWDFYSSSVLEEKDGFACDLLHNPPGSSDQEGDDVEEDNFMFELSDKPLLPCYNLQVSVSRGPCNWFLFTDVLKRLKLSSRIFQARFPHFEIATLPKAEFYRQVASSQLLTPAERPGGVDGTSAPGSSETVELVRYEVELLRLLGSEVEFQPWNS
SIO_010081: BCORL1
subclass of: SO_0000673
so part of: BCORL1
location: join(6630032..6630117,6634804..6634891,6635160..6638435,6642208..6642373,6643637..6643717,6645794..6646183,6650174..6650397,6654849..6655070,6657154..6657320,6658070..6658215,6664670..6664747,6665747..6665900,6669228..6669510)
location: region:6630032-6669510:1
so has part: feature:6630032-6630117:1:exon
so has part: feature:6634804-6634891:1:exon
so has part: feature:6635160-6638435:1:exon
so has part: feature:6642208-6642373:1:exon
so has part: feature:6643637-6643717:1:exon
so has part: feature:6645794-6646183:1:exon
so has part: feature:6650174-6650397:1:exon
so has part: feature:6654849-6655070:1:exon
so has part: feature:6657154-6657320:1:exon
so has part: feature:6658070-6658215:1:exon
so has part: feature:6664670-6664747:1:exon
so has part: feature:6665747-6665900:1:exon
so has part: feature:6669228-6669510:1:exon

XP_019811686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6630032-6630117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6634804-6634891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6635160-6638435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6642208-6642373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6643637-6643717:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6645794-6646183:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6650174-6650397:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6654849-6655070:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6657154-6657320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6658070-6658215:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6664670-6664747:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6665747-6665900:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6669228-6669510:1:exon

BCORL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: BCORL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL-6 corepressor-like protein 1 isoform X2
translation: MDYTGSVAETGGPLVSLSSPGDGLKLSAPDGPEAGNDTADCSWTPLSSQMSKQVDCSPAGAKALDSRHGVGEKNTFILATLGTGVPVEGTLPLVTTNFSPLPAPICPPAPSSASVPPSVPDPFQVXXXXPAPVPHSGLVPVQVAASVPAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPMSAPAPTPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPAVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPPATPTAIPTSAPIPASFSLSRVCFPAAQAPAMQKVPLSFQPGTVLTPSQPLVYIPPPSCGQPLSVATLPTTLGVSSTLTLPVLPSYLQDRCLPGVLASPELRSYPYAFSVARPLTSESKLVSLEVNRLPCASPSGSTSTQPAPDGVPGPLADTSLSTASAKVLPPPQPLLPAPSGSSAPPHPTKMPGSVEQQTEGTSVTFSPLKSPPQLEREMASPPECSEMPLDLSSKSNRQKLPLPNQRKTPPMPVLTPVHTSSKALLSTVLSRSQRTTQAAGSSVTSCLGSTSSPFVIFPEIVRNGDPSTWVKNSTALISTIPGTYVGVANPVPASLLLNKDPNLGLTRDPRHLPKQEPISIIDQGEPKGTGAPCGKKSSQAGTEGPPSTVKRYTPARIAPGLPGCQSKELSLWKPTGPANIYPRCSVNGKPTSTQVLPVGWSPYHQASLLSIGISSAGQLTPSQGVPIRPTSVVSEFSGVPSLGPSEAMHGLPEGQPPRPGGPFAPEQDTGTKNKTCRIAAKPYEEQVNPVLLTLSPQTGTLALSVQPSSGDLRVTQGPGEPESHLCPDSTPKLEGPQGACGLKLAGETKPKNQVLATYMSHELVLATPQNLHKMPELPLLPHDSRPKELILDVVPSSARAASTELPQLGSQVDLGRVKMEKVDGDVVFNLATCFRADGLPAATPRGQVEVRSKAGQARVKQESIGVFACKNKWQPDSVVSDGASESPPPKKMKCGKEKDGEEQQPQAKVLVRSSHGPKCRKPPSDPQEPTKKSPRGAPDSGKEHNGVRVKHKHRKPTKPESQSPGKRADGHEEGSLEKKAKSSFRDFIPVVLSTRTRSQSGSICSSFAGMADSDMGCQEVFPTEEEEEVTPTPAKRRKVRKTQRDTQYRSHHAQDKTLLSQGRRHLWRAREMPWRTEAARQMWDTNEEEEEDEEEGLVKRKKRRRQKSRKYQTGEYLTEQEEEQRRKGRADLKARKQKTSSQSPEHRLRNRNLLLPNKAQGISDSPNGFLPNNLEEPACLENSEKPSGKRKCKTKHMVTVSEDAKSKGRWSQQKTRPPKSPTPAKPTEPCTPSKSRSAGPEEASESPTARQIPPEARRLIVNKNAGETLLQRAARLGYKDVVLYCLQKDSEDVNHRDNAGYTALHEACSRGWTDILNILLEHGANVNCSAQDGTRPVHDAVVNDNLETIWLLLSYGADPTLATYXXXXAMKLASSDTMKRFLSDHLSDLQGRAEGDPGVSWDFYSSSVLEEKDGFACDLLHNPPGSSDQEGDDVEEDNFMFELSDKPLLPCYNLQVSVSRGPCNWFLFTDVLKRLKLSSRIFQARFPHFEIATLPKAEFYRQVASSQLLTPAERPGGVDGTSAPGSSETVELVRYEVELLRLLGSEVEFQPWNS
SIO_010081: BCORL1
subclass of: SO_0000673
so part of: BCORL1
location: join(6635277..6638435,6642208..6642373,6643637..6643717,6645794..6646183,6650174..6650397,6654849..6655070,6657154..6657320,6658070..6658215,6664670..6664747,6665747..6665900,6669228..6669510)
location: region:6635277-6669510:1
so has part: feature:6635277-6638435:1:exon
so has part: feature:6642208-6642373:1:exon
so has part: feature:6643637-6643717:1:exon
so has part: feature:6645794-6646183:1:exon
so has part: feature:6650174-6650397:1:exon
so has part: feature:6654849-6655070:1:exon
so has part: feature:6657154-6657320:1:exon
so has part: feature:6658070-6658215:1:exon
so has part: feature:6664670-6664747:1:exon
so has part: feature:6665747-6665900:1:exon
so has part: feature:6669228-6669510:1:exon

XP_019811687.1
type: Protein
SIO_000068: ncbiprotein

position:6635277:1
position: 6635277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6635277-6638435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6642208-6642373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6643637-6643717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6645794-6646183:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6650174-6650397:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6654849-6655070:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6657154-6657320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6658070-6658215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6664670-6664747:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6665747-6665900:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6669228-6669510:1:exon

ELF4
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6675954..6715504)
location: region:6675954-6715504:-1
so has part: feature:6675954-6715504:-1:exon
subclass of: SO_0000010

109555279
type: Gene
SIO_000068: ncbigene

position:6675954:-1
position: 6675954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6715504:-1
position: 6715504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6675954-6715504:-1:exon

ELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ELF4
product: E74 like ETS transcription factor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 23 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_019956022.1
SIO_010081: ELF4
subclass of: SO_0000673
so part of: ELF4
location: complement(join(6675954..6679969,6680797..6681174,6681839..6682031,6682120..6682203,6682983..6683174,6684791..6684883,6685282..6685453,6689571..6689850,6715411..6715504))
location: region:6675954-6715504:-1
so has part: feature:6715411-6715504:-1:exon
so has part: feature:6689571-6689850:-1:exon
so has part: feature:6685282-6685453:-1:exon
so has part: feature:6684791-6684883:-1:exon
so has part: feature:6682983-6683174:-1:exon
so has part: feature:6682120-6682203:-1:exon
so has part: feature:6681839-6682031:-1:exon
so has part: feature:6680797-6681174:-1:exon
so has part: feature:6675954-6679969:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6715411-6715504:-1:exon

position:6715411:-1
position: 6715411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6689571-6689850:-1:exon

position:6689571:-1
position: 6689571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6689850:-1
position: 6689850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6685282-6685453:-1:exon

position:6685282:-1
position: 6685282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6685453:-1
position: 6685453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6684791-6684883:-1:exon

position:6684791:-1
position: 6684791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6684883:-1
position: 6684883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6682983-6683174:-1:exon

position:6682983:-1
position: 6682983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6683174:-1
position: 6683174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6682120-6682203:-1:exon

position:6682120:-1
position: 6682120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6682203:-1
position: 6682203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6681839-6682031:-1:exon

position:6681839:-1
position: 6681839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6682031:-1
position: 6682031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6680797-6681174:-1:exon

position:6680797:-1
position: 6680797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6681174:-1
position: 6681174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6675954-6679969:-1:exon

position:6679969:-1
position: 6679969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-4
translation: MAVALQPSDLIFEFASNGMDDIHQLEDPSVFPAVIVEQVPYPELLHLYSGLELDDVHNGIITDGTLCMTQDQILEGSFLLADDNETTSQTVSTPEVLLNVESPNNILDDKQIFSTSEMLPEPDPAPAMTLPNYLFPVSEPDALNRAGNTGDQEENCLEEKVPREESAKKTGKSKKRIRKTKGNRSTSPVTDLSIPIRKKSKDGKGSTIYLWEFLLALLQDRNTCPKYIKWTQREKGIFKLVDSKAVSKLWGKQKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPKDLVVIEDEDERSEVTATSPQASAPSTSSGGSSRRASSRVSSRAAPQGKGDTSWEKPKVQHVGLQPSASLELGLSIDEEIPTTSAMLVSPPESQAKVTKAVSTSAVPSSIHLGVAPVRSGSALTLQTIPLTTVLTNGPPASTTASTQLVLQSVPPASTFKDTFTLQTSFPLNTSFQENQVAAPGAPLILSGLPQLLAGANRPTNPAPPSVMGAGPAGPSSXAPGTVIAAFIRTSGATTAPGVKEGPLRPSSYVQGMMTGAPMEGLLVSEETLRELLREQAHLQPLPSQVVSRASHNPSLLGNQTLSPPSRPTVGLTPVAELELSSSSGSLFTAEPNVSTPGSLLTRSPTPASISPFNPTSLIKMEPHDM
SIO_010081: ELF4
subclass of: SO_0000673
so part of: ELF4
location: complement(join(6679165..6679969,6680797..6681174,6681839..6682031,6682120..6682203,6682983..6683174,6684791..6684883,6685282..6685453,6689571..6689642))
location: region:6679165-6689642:-1
so has part: feature:6689571-6689642:-1:exon
so has part: feature:6685282-6685453:-1:exon
so has part: feature:6684791-6684883:-1:exon
so has part: feature:6682983-6683174:-1:exon
so has part: feature:6682120-6682203:-1:exon
so has part: feature:6681839-6682031:-1:exon
so has part: feature:6680797-6681174:-1:exon
so has part: feature:6679165-6679969:-1:exon

XP_019811581.1
type: Protein
SIO_000068: ncbiprotein

position:6679165:-1
position: 6679165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6689642:-1
position: 6689642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6689571-6689642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6685282-6685453:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6684791-6684883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6682983-6683174:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6682120-6682203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6681839-6682031:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6680797-6681174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6679165-6679969:-1:exon

AIFM1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: AIFM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6729279..6760106)
location: region:6729279-6760106:-1
so has part: feature:6729279-6760106:-1:exon
subclass of: SO_0000010

109555268
type: Gene
SIO_000068: ncbigene

position:6729279:-1
position: 6729279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6760106:-1
position: 6760106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6729279-6760106:-1:exon

AIFM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: AIFM1
product: apoptosis inducing factor, mitochondria associated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 64 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 263 samples with support for all annotated introns
transcript id: XM_019956004.1
SIO_010081: AIFM1
subclass of: SO_0000673
so part of: AIFM1
location: complement(join(6729279..6729546,6729869..6730065,6732076..6732200,6733658..6733800,6735426..6735566,6736019..6736107,6736440..6736547,6737294..6737402,6738293..6738369,6738953..6739037,6743760..6743850,6745343..6745473,6745601..6745725,6746960..6747059,6752992..6753134,6759771..6760106))
location: region:6729279-6760106:-1
so has part: feature:6759771-6760106:-1:exon
so has part: feature:6752992-6753134:-1:exon
so has part: feature:6746960-6747059:-1:exon
so has part: feature:6745601-6745725:-1:exon
so has part: feature:6745343-6745473:-1:exon
so has part: feature:6743760-6743850:-1:exon
so has part: feature:6738953-6739037:-1:exon
so has part: feature:6738293-6738369:-1:exon
so has part: feature:6737294-6737402:-1:exon
so has part: feature:6736440-6736547:-1:exon
so has part: feature:6736019-6736107:-1:exon
so has part: feature:6735426-6735566:-1:exon
so has part: feature:6733658-6733800:-1:exon
so has part: feature:6732076-6732200:-1:exon
so has part: feature:6729869-6730065:-1:exon
so has part: feature:6729279-6729546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6759771-6760106:-1:exon

position:6759771:-1
position: 6759771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6752992-6753134:-1:exon

position:6752992:-1
position: 6752992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6753134:-1
position: 6753134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6746960-6747059:-1:exon

position:6746960:-1
position: 6746960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6747059:-1
position: 6747059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6745601-6745725:-1:exon

position:6745601:-1
position: 6745601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6745725:-1
position: 6745725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6745343-6745473:-1:exon

position:6745343:-1
position: 6745343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6745473:-1
position: 6745473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6743760-6743850:-1:exon

position:6743760:-1
position: 6743760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6743850:-1
position: 6743850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6738953-6739037:-1:exon

position:6738953:-1
position: 6738953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6739037:-1
position: 6739037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6738293-6738369:-1:exon

position:6738293:-1
position: 6738293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6738369:-1
position: 6738369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6737294-6737402:-1:exon

position:6737294:-1
position: 6737294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6737402:-1
position: 6737402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6736440-6736547:-1:exon

position:6736440:-1
position: 6736440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6736547:-1
position: 6736547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6736019-6736107:-1:exon

position:6736019:-1
position: 6736019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6736107:-1
position: 6736107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6735426-6735566:-1:exon

position:6735426:-1
position: 6735426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6735566:-1
position: 6735566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6733658-6733800:-1:exon

position:6733658:-1
position: 6733658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6733800:-1
position: 6733800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6732076-6732200:-1:exon

position:6732076:-1
position: 6732076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6732200:-1
position: 6732200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6729869-6730065:-1:exon

position:6729869:-1
position: 6729869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6730065:-1
position: 6730065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6729279-6729546:-1:exon

position:6729546:-1
position: 6729546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AIFM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: AIFM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptosis-inducing factor 1, mitochondrial
translation: MFRCGGLAAGALKQKLAPLVRTVCVRGPRQRNRLPGNLFQRWHVPLELQMTRQMASSGPSGGKIDNSVLVLIVGLSTIGAGAYAYKTIKDDKKRYNERISGLGLTPEEKQKRATSSALEGEPEPQVRIPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPRVENGGVAVLTGKKVVQLDVRGNVAKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIEDFRTLEKISREVKSITIIGGGFLGSELACALGRKARASGTEVIQLFPEKGNMGKVLPEYLSNWTMEKVRREGVKVLPSAIVQSVGVSAGRLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASDIPVPPSNPAVPQVPTQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHEDLNEVAKLFNIHED
SIO_010081: AIFM1
subclass of: SO_0000673
so part of: AIFM1
location: complement(join(6729475..6729546,6729869..6730065,6732076..6732200,6733658..6733800,6735426..6735566,6736019..6736107,6736440..6736547,6737294..6737402,6738293..6738369,6738953..6739037,6743760..6743850,6745343..6745473,6745601..6745725,6746960..6747059,6752992..6753134,6759771..6759876))
location: region:6729475-6759876:-1
so has part: feature:6759771-6759876:-1:exon
so has part: feature:6752992-6753134:-1:exon
so has part: feature:6746960-6747059:-1:exon
so has part: feature:6745601-6745725:-1:exon
so has part: feature:6745343-6745473:-1:exon
so has part: feature:6743760-6743850:-1:exon
so has part: feature:6738953-6739037:-1:exon
so has part: feature:6738293-6738369:-1:exon
so has part: feature:6737294-6737402:-1:exon
so has part: feature:6736440-6736547:-1:exon
so has part: feature:6736019-6736107:-1:exon
so has part: feature:6735426-6735566:-1:exon
so has part: feature:6733658-6733800:-1:exon
so has part: feature:6732076-6732200:-1:exon
so has part: feature:6729869-6730065:-1:exon
so has part: feature:6729475-6729546:-1:exon

XP_019811563.1
type: Protein
SIO_000068: ncbiprotein

position:6729475:-1
position: 6729475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6759876:-1
position: 6759876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6759771-6759876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6752992-6753134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6746960-6747059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6745601-6745725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6745343-6745473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6743760-6743850:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6738953-6739037:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6738293-6738369:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6737294-6737402:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6736440-6736547:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6736019-6736107:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6735426-6735566:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6733658-6733800:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6732076-6732200:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6729869-6730065:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6729475-6729546:-1:exon

LOC109554760
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554760
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <6765616..6775309
location: region:6765616-6775309:1
so has part: feature:6765616-6775309:1:exon
subclass of: SO_0000010

109554760
type: Gene
SIO_000068: ncbigene

position:6765616:1
position: 6765616
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:6775309:1
position: 6775309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6765616-6775309:1:exon

LOC109554760
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109554760
product: ras-related protein Rab-33A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_019955397.1
SIO_010081: LOC109554760
subclass of: SO_0000673
so part of: LOC109554760
location: join(<6765616..6765828,6774737..6775309)
location: region:6765616-6775309:1
so has part: feature:6765616-6765828:1:exon
so has part: feature:6774737-6775309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6765616-6765828:1:exon

position:6765828:1
position: 6765828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6774737-6775309:1:exon

position:6774737:1
position: 6774737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109554760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109554760
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-33A-like
translation: AAGLASLELDSSLDQYVQIRIFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDLREQIQVPSNLALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRLKAQKSLLYRDAERQQGKVQKLEFPQEANSKTSCPC
SIO_010081: LOC109554760
subclass of: SO_0000673
so part of: LOC109554760
location: join(<6765616..6765828,6774737..6775192)
location: region:6765616-6775192:1
so has part: feature:6765616-6765828:1:exon
so has part: feature:6774737-6775192:1:exon

XP_019810956.1
type: Protein
SIO_000068: ncbiprotein

position:6775192:1
position: 6775192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6765616-6765828:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6774737-6775192:1:exon

LOC109555557
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6787827..6792774
location: region:6787827-6792774:1
so has part: feature:6787827-6792774:1:exon
subclass of: SO_0000011

109555557
type: Gene
SIO_000068: ncbigene

position:6787827:1
position: 6787827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6792774:1
position: 6792774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6787827-6792774:1:exon

LOC109555557
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109555557
product: uncharacterized LOC109555557
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XR_002180285.1
SIO_010081: LOC109555557
subclass of: SO_0000673
so part of: LOC109555557
location: join(6787827..6787930,6791392..6791510,6791952..6791987,6792112..6792774)
location: region:6787827-6792774:1
so has part: feature:6787827-6787930:1:exon
so has part: feature:6791392-6791510:1:exon
so has part: feature:6791952-6791987:1:exon
so has part: feature:6792112-6792774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6787827-6787930:1:exon

position:6787930:1
position: 6787930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6791392-6791510:1:exon

position:6791392:1
position: 6791392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6791510:1
position: 6791510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6791952-6791987:1:exon

position:6791952:1
position: 6791952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6791987:1
position: 6791987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6792112-6792774:1:exon

position:6792112:1
position: 6792112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109555016
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6817267..6825693)
location: region:6817267-6825693:-1
so has part: feature:6817267-6825693:-1:exon
subclass of: SO_0000011

109555016
type: Gene
SIO_000068: ncbigene

position:6817267:-1
position: 6817267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6825693:-1
position: 6825693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6817267-6825693:-1:exon

LOC109555016
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109555016
product: uncharacterized LOC109555016
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_002180214.1
SIO_010081: LOC109555016
subclass of: SO_0000673
so part of: LOC109555016
location: complement(join(6817267..6817372,6817489..6817534,6825006..6825693))
location: region:6817267-6825693:-1
so has part: feature:6825006-6825693:-1:exon
so has part: feature:6817489-6817534:-1:exon
so has part: feature:6817267-6817372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6825006-6825693:-1:exon

position:6825006:-1
position: 6825006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6817489-6817534:-1:exon

position:6817489:-1
position: 6817489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6817534:-1
position: 6817534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6817267-6817372:-1:exon

position:6817372:-1
position: 6817372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109554980
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6896198..6905956
location: region:6896198-6905956:1
so has part: feature:6896198-6905956:1:exon
subclass of: SO_0000010

109554980
type: Gene
SIO_000068: ncbigene

position:6896198:1
position: 6896198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6905956:1
position: 6905956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6896198-6905956:1:exon

LOC109554980
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109554980
product: ras-related protein Rab-33A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_019955539.1
SIO_010081: LOC109554980
subclass of: SO_0000673
so part of: LOC109554980
location: join(6896198..6896502,6905411..6905956)
location: region:6896198-6905956:1
so has part: feature:6896198-6896502:1:exon
so has part: feature:6905411-6905956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6896198-6896502:1:exon

position:6896502:1
position: 6896502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6905411-6905956:1:exon

position:6905411:1
position: 6905411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109554980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109554980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-33A
translation: MAQPILGHGNLQPASAAGLASLELDSSLDQYVQIRIFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDLREQIQVPSNLALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRLKAQKSLLYRDAERQQGKVQKLEFPQEANSKTSCPC
SIO_010081: LOC109554980
subclass of: SO_0000673
so part of: LOC109554980
location: join(6896245..6896502,6905411..6905866)
location: region:6896245-6905866:1
so has part: feature:6896245-6896502:1:exon
so has part: feature:6905411-6905866:1:exon

XP_019811098.1
type: Protein
SIO_000068: ncbiprotein

position:6896245:1
position: 6896245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6905866:1
position: 6905866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6896245-6896502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6905411-6905866:1:exon

ZNF280C
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ZNF280C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6927331..>6973114)
location: region:6927331-6973114:-1
so has part: feature:6927331-6973114:-1:exon
subclass of: SO_0000010

109554761
type: Gene
SIO_000068: ncbigene

position:6927331:-1
position: 6927331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6973114:-1
position: 6973114
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6927331-6973114:-1:exon

ZNF280C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF280C
product: zinc finger protein 280C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019955398.1
SIO_010081: ZNF280C
subclass of: SO_0000673
so part of: ZNF280C
location: complement(join(6927331..6928329,6928454..6928489,6928931..6929004,6932529..6932573,6938661..6938798,6939267..6939580,6943812..6943943,6950910..6951056,6951825..6951925,6952597..6952754,6958340..6958557,6960041..6960150,6960294..6960455,6964247..6964361,6969930..6970084,6972964..>6973114))
location: region:6927331-6973114:-1
so has part: feature:6972964-6973114:-1:exon
so has part: feature:6969930-6970084:-1:exon
so has part: feature:6964247-6964361:-1:exon
so has part: feature:6960294-6960455:-1:exon
so has part: feature:6960041-6960150:-1:exon
so has part: feature:6958340-6958557:-1:exon
so has part: feature:6952597-6952754:-1:exon
so has part: feature:6951825-6951925:-1:exon
so has part: feature:6950910-6951056:-1:exon
so has part: feature:6943812-6943943:-1:exon
so has part: feature:6939267-6939580:-1:exon
so has part: feature:6938661-6938798:-1:exon
so has part: feature:6932529-6932573:-1:exon
so has part: feature:6928931-6929004:-1:exon
so has part: feature:6928454-6928489:-1:exon
so has part: feature:6927331-6928329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6972964-6973114:-1:exon

position:6972964:-1
position: 6972964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6969930-6970084:-1:exon

position:6969930:-1
position: 6969930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6970084:-1
position: 6970084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6964247-6964361:-1:exon

position:6964247:-1
position: 6964247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6964361:-1
position: 6964361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6960294-6960455:-1:exon

position:6960294:-1
position: 6960294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6960455:-1
position: 6960455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6960041-6960150:-1:exon

position:6960041:-1
position: 6960041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6960150:-1
position: 6960150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6958340-6958557:-1:exon

position:6958340:-1
position: 6958340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6958557:-1
position: 6958557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6952597-6952754:-1:exon

position:6952597:-1
position: 6952597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6952754:-1
position: 6952754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6951825-6951925:-1:exon

position:6951825:-1
position: 6951825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6951925:-1
position: 6951925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6950910-6951056:-1:exon

position:6950910:-1
position: 6950910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6951056:-1
position: 6951056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6943812-6943943:-1:exon

position:6943812:-1
position: 6943812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6943943:-1
position: 6943943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6939267-6939580:-1:exon

position:6939267:-1
position: 6939267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6939580:-1
position: 6939580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6938661-6938798:-1:exon

position:6938661:-1
position: 6938661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6938798:-1
position: 6938798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6932529-6932573:-1:exon

position:6932529:-1
position: 6932529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6932573:-1
position: 6932573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6928931-6929004:-1:exon

position:6928931:-1
position: 6928931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6929004:-1
position: 6929004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6928454-6928489:-1:exon

position:6928454:-1
position: 6928454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6928489:-1
position: 6928489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6927331-6928329:-1:exon

position:6928329:-1
position: 6928329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF280C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF280C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 280C
translation: KLDSSKMAELFMECEEEELEPWQKKVETPQEEDDELIFVGAVPGSKSPTSSELDEDSSSPEAAFPRFHPESQSSSPEAAFPRFHPESRSSYNSDMAQNVSKPDFAKNSSQVGLDESSDLPFSWSQNTVPLSQDGSTIYIEGLDETLPKIKHSDIIKIITVNPKTSESVSEINPCASLSLTNCSSATSSYLMWSKGTHTLSTATRTGTFFVRACPKCNVQFNLLDPLKYHMKVCCPDMVDVFMEMIKVELSNIEQNTTGAETGKLIMLVSDFYYGRHEGNFDDDEKTYTTFKCFSCLKVLKNNIRFMNHMKHHLELEKQNTESWENHTTCQHCYRQYPTPFQLQCHIESTHTPLEFSTICKICELSFDTEHILLQHMKDTHKPGEMPYICQVCQFRSSSFTDVETHFRVSHENTKNLLCPFCLKVSRMATPYMNHYMKHQKKGIHRCSQCRLQFLTYKEKLVHKLEHRTFIKPKELEGLPPGTKVTIRASIESLHSGPSTSKSILSSSTSSSTCLQVSPSTSKTTTTGSSPRSNANEYKTREFSATTSTESKPSTSKERAAKCRAKTSYKPKKKRNRRNKISVALKNLRCRGVYTCIECHTKIKDFASHFSLFTRCNFCKYSTNCNKAFVNHMLSSHTSQPAKRVSIFKNSTLDRMAKHLSQRKTHTCQVIIETLPEGTSAVNPFLPSC
SIO_010081: ZNF280C
subclass of: SO_0000673
so part of: ZNF280C
location: complement(join(6928319..6928329,6928454..6928489,6928931..6929004,6932529..6932573,6938661..6938798,6939267..6939580,6943812..6943943,6950910..6951056,6951825..6951925,6952597..6952754,6958340..6958557,6960041..6960150,6960294..6960455,6964247..6964361,6969930..6970084,6972964..>6973114))
location: region:6928319-6973114:-1
so has part: feature:6972964-6973114:-1:exon
so has part: feature:6969930-6970084:-1:exon
so has part: feature:6964247-6964361:-1:exon
so has part: feature:6960294-6960455:-1:exon
so has part: feature:6960041-6960150:-1:exon
so has part: feature:6958340-6958557:-1:exon
so has part: feature:6952597-6952754:-1:exon
so has part: feature:6951825-6951925:-1:exon
so has part: feature:6950910-6951056:-1:exon
so has part: feature:6943812-6943943:-1:exon
so has part: feature:6939267-6939580:-1:exon
so has part: feature:6938661-6938798:-1:exon
so has part: feature:6932529-6932573:-1:exon
so has part: feature:6928931-6929004:-1:exon
so has part: feature:6928454-6928489:-1:exon
so has part: feature:6928319-6928329:-1:exon

XP_019810957.1
type: Protein
SIO_000068: ncbiprotein

position:6928319:-1
position: 6928319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6972964-6973114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6969930-6970084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6964247-6964361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6960294-6960455:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6960041-6960150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6958340-6958557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6952597-6952754:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6951825-6951925:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6950910-6951056:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6943812-6943943:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6939267-6939580:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6938661-6938798:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6932529-6932573:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6928931-6929004:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6928454-6928489:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6928319-6928329:-1:exon

LOC109554762
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554762
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7020914..7021855
location: region:7020914-7021855:1
so has part: feature:7020914-7021855:1:exon
subclass of: SO_0000010

109554762
type: Gene
SIO_000068: ncbigene

position:7020914:1
position: 7020914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7021855:1
position: 7021855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7020914-7021855:1:exon

LOC109554762
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109554762
product: olfactory receptor 1468-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_019955400.1
SIO_010081: LOC109554762
subclass of: SO_0000673
so part of: LOC109554762
location: 7020914..7021855
location: region:7020914-7021855:1
so has part: feature:7020914-7021855:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7020914-7021855:1:exon

LOC109554762
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109554762
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 1468-like
translation: MLQGNQTISAFFLLGLTAVSEQQQHIFVLFLCMYLVTMVGNLLIILAIVNDAHLHSPMYFFLASLSFTDICFTSTTVPKMLADIQSQSPVISFAGCLTQMYFFMLLVDLDNFLLAAMAYDRYVAICYPLHYAALLSLKRCALLVVTPWVVCNLLSVLHIGLLGLLNFCDQREIPHFFCDLEPILRLACSDTQINDLTILVIGGAVIFIPFTFICVSYFLIGCTVLRIPSAKGKWKTFSTCGSHFLAVSLFYGSISGVYFLPSSAYSAERDKVAAVMYTVVTPMMNPFIYSLRNKDLKGAVRRLLIRKTYFCRW
SIO_010081: LOC109554762
subclass of: SO_0000673
so part of: LOC109554762
location: 7020914..7021855
location: region:7020914-7021855:1
so has part: feature:7020914-7021855:1:exon

XP_019810959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7020914-7021855:1:exon

LOC109555115
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7085155..7086081
location: region:7085155-7086081:1
so has part: feature:7085155-7086081:1:exon
subclass of: SO_0000010

109555115
type: Gene
SIO_000068: ncbigene

position:7085155:1
position: 7085155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7086081:1
position: 7086081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7085155-7086081:1:exon

LOC109555115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109555115
product: olfactory receptor 13H1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins
transcript id: XM_019955692.1
SIO_010081: LOC109555115
subclass of: SO_0000673
so part of: LOC109555115
location: 7085155..7086081
location: region:7085155-7086081:1
so has part: feature:7085155-7086081:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7085155-7086081:1:exon

LOC109555115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109555115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 13H1-like
translation: MAMDNATAVFEFLLIGISNYPEWRVTFFTLVLITYLSTLLGNGLIIFLIYIDPHLHTPMYFFLSNLSFLDLCYGTVSMPQALVHCFSAHPYLSYPRCLTQISVSLALGTAECLLLAVMAHDRVVAIGNPLRYSVVMNSSVCVWLAATSWGASLVLTSMLILPLRLHFCEANVINHFVCEILSLLKLACSDTSLNELLILITSIFTLLLPFGFVLLSYVRIAAAVLRIRSAQGRLKAFSTCASHVTVVVIFYGAAISMYMKPQSKSSSDQDKFISVFYGALTPMLNPLIYSLRNKDVKGAMRKVMAKRT
SIO_010081: LOC109555115
subclass of: SO_0000673
so part of: LOC109555115
location: 7085155..7086081
location: region:7085155-7086081:1
so has part: feature:7085155-7086081:1:exon

XP_019811251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7085155-7086081:1:exon

LOC109554763
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7102544..7103289
location: region:7102544-7103289:1
so has part: feature:7102544-7103289:1:exon
subclass of: SO_0000010

109554763
type: Gene
SIO_000068: ncbigene

position:7102544:1
position: 7102544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7103289:1
position: 7103289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7102544-7103289:1:exon

LOC109554763
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109554763
product: olfactory receptor 13H1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_019955401.1
SIO_010081: LOC109554763
subclass of: SO_0000673
so part of: LOC109554763
location: 7102544..7103289
location: region:7102544-7103289:1
so has part: feature:7102544-7103289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7102544-7103289:1:exon

LOC109554763
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109554763
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:7102805..7102807,aa:OTHER)
product: LOW QUALITY PROTEIN: olfactory receptor 13H1-like
translation: MYFSLSNLSFLDICYSSNSVPFSALRNYPTISYTSCYAQMVISLFLGMTECLLLAVMAYDRFIAISNPLHYTIIMNNQVCIQLAVVTXAXCFLLAEIPITAILAHFCGHNLIKHFTCETQAFLKLICLETPVRLILGLVVGIFTLPLPFTFILISYTCIVVAMLKIRSAEARLKAFSTCGSHPPVVNIFYGTAIYMYLKPQSRQYQDQDKVISAICGNVTPMPNPLIYILRNKDVKDALRKIIKRQEF
SIO_010081: LOC109554763
subclass of: SO_0000673
so part of: LOC109554763
location: 7102544..7103289
location: region:7102544-7103289:1
so has part: feature:7102544-7103289:1:exon

XP_019810960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7102544-7103289:1:exon

LOC109554764
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554764
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7158702..7172008
location: region:7158702-7172008:1
so has part: feature:7158702-7172008:1:exon

109554764
type: Gene
SIO_000068: ncbigene

position:7158702:1
position: 7158702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7172008:1
position: 7172008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7158702-7172008:1:exon

LOC109554764
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554764
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109554764
subclass of: SO_0000673
so part of: LOC109554764
location: 7158702..7158868
location: region:7158702-7158868:1
so has part: feature:7158702-7158868:1:exon

position:7158868:1
position: 7158868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7158702-7158868:1:exon

LOC109554764
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554764
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109554764
subclass of: SO_0000673
so part of: LOC109554764
location: 7171269..7172008
location: region:7171269-7172008:1
so has part: feature:7171269-7172008:1:exon

position:7171269:1
position: 7171269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7171269-7172008:1:exon

STK26
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: STK26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7444705..7511063
location: region:7444705-7511063:1
so has part: feature:7444705-7511063:1:exon
subclass of: SO_0000010

109555401
type: Gene
SIO_000068: ncbigene

position:7444705:1
position: 7444705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7511063:1
position: 7511063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7444705-7511063:1:exon

STK26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: STK26
product: serine/threonine kinase 26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 25 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_019956250.1
SIO_010081: STK26
subclass of: SO_0000673
so part of: STK26
location: join(7444705..7444893,7444996..7445146,7488732..7488962,7498978..7499034,7503728..7503836,7503923..7504080,7504936..7505121,7506208..7506356,7507439..7507532,7507927..7507989,7508072..7508208,7509295..7511063)
location: region:7444705-7511063:1
so has part: feature:7444705-7444893:1:exon
so has part: feature:7444996-7445146:1:exon
so has part: feature:7488732-7488962:1:exon
so has part: feature:7498978-7499034:1:exon
so has part: feature:7503728-7503836:1:exon
so has part: feature:7503923-7504080:1:exon
so has part: feature:7504936-7505121:1:exon
so has part: feature:7506208-7506356:1:exon
so has part: feature:7507439-7507532:1:exon
so has part: feature:7507927-7507989:1:exon
so has part: feature:7508072-7508208:1:exon
so has part: feature:7509295-7511063:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7444705-7444893:1:exon

position:7444893:1
position: 7444893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7444996-7445146:1:exon

position:7444996:1
position: 7444996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7445146:1
position: 7445146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7488732-7488962:1:exon

position:7488732:1
position: 7488732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7488962:1
position: 7488962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7498978-7499034:1:exon

position:7498978:1
position: 7498978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7499034:1
position: 7499034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7503728-7503836:1:exon

position:7503728:1
position: 7503728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7503836:1
position: 7503836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7503923-7504080:1:exon

position:7503923:1
position: 7503923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7504080:1
position: 7504080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7504936-7505121:1:exon

position:7504936:1
position: 7504936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7505121:1
position: 7505121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7506208-7506356:1:exon

position:7506208:1
position: 7506208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7506356:1
position: 7506356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7507439-7507532:1:exon

position:7507439:1
position: 7507439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7507532:1
position: 7507532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7507927-7507989:1:exon

position:7507927:1
position: 7507927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7507989:1
position: 7507989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7508072-7508208:1:exon

position:7508072:1
position: 7508072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7508208:1
position: 7508208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7509295-7511063:1:exon

position:7509295:1
position: 7509295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STK26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: STK26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 26
translation: MAHSPVAVQVPGMQNNIADPEELFTKLERIGKGSFGEVFKGIDNRSQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTELIDRFKRWKAEGHSDDESDSDGSDSESTSRENNTHPEWSFTTVRKKPDPKKLQNGAEQDLVQTLSCLSMIITPAFAELKQQDENNASRNQAIEELEKSIAVAEAACPGITDKMVKKLIEKFQKCSTDESPKKLLVIGFYFIWTQRNPPKLLQAYQCLTHELHVPFGSL
SIO_010081: STK26
subclass of: SO_0000673
so part of: STK26
location: join(7445105..7445146,7488732..7488962,7498978..7499034,7503728..7503836,7503923..7504080,7504936..7505121,7506208..7506356,7507439..7507532,7507927..7507989,7508072..7508208,7509295..7509433)
location: region:7445105-7509433:1
so has part: feature:7445105-7445146:1:exon
so has part: feature:7488732-7488962:1:exon
so has part: feature:7498978-7499034:1:exon
so has part: feature:7503728-7503836:1:exon
so has part: feature:7503923-7504080:1:exon
so has part: feature:7504936-7505121:1:exon
so has part: feature:7506208-7506356:1:exon
so has part: feature:7507439-7507532:1:exon
so has part: feature:7507927-7507989:1:exon
so has part: feature:7508072-7508208:1:exon
so has part: feature:7509295-7509433:1:exon

XP_019811809.1
type: Protein
SIO_000068: ncbiprotein

position:7445105:1
position: 7445105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7509433:1
position: 7509433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7445105-7445146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7488732-7488962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7498978-7499034:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7503728-7503836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7503923-7504080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7504936-7505121:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7506208-7506356:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7507439-7507532:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7507927-7507989:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7508072-7508208:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7509295-7509433:1:exon

FRMD7
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: FRMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7512618..7572626)
location: region:7512618-7572626:-1
so has part: feature:7512618-7572626:-1:exon
subclass of: SO_0000010

109555567
type: Gene
SIO_000068: ncbigene

position:7512618:-1
position: 7512618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7572626:-1
position: 7572626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7512618-7572626:-1:exon

FRMD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FRMD7
product: FERM domain containing 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019956510.1
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(7512618..7514358,7515441..7515516,7515635..7515703,7517100..7517263,7518602..7518697,7522651..7522798,7523357..7523471,7532466..7532563,7535596..7535674,7538496..7538538,7539336..7539440,7572412..7572626))
location: region:7512618-7572626:-1
so has part: feature:7572412-7572626:-1:exon
so has part: feature:7539336-7539440:-1:exon
so has part: feature:7538496-7538538:-1:exon
so has part: feature:7535596-7535674:-1:exon
so has part: feature:7532466-7532563:-1:exon
so has part: feature:7523357-7523471:-1:exon
so has part: feature:7522651-7522798:-1:exon
so has part: feature:7518602-7518697:-1:exon
so has part: feature:7517100-7517263:-1:exon
so has part: feature:7515635-7515703:-1:exon
so has part: feature:7515441-7515516:-1:exon
so has part: feature:7512618-7514358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7572412-7572626:-1:exon

position:7572412:-1
position: 7572412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7539336-7539440:-1:exon

position:7539336:-1
position: 7539336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7539440:-1
position: 7539440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7538496-7538538:-1:exon

position:7538496:-1
position: 7538496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7538538:-1
position: 7538538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7535596-7535674:-1:exon

position:7535596:-1
position: 7535596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7535674:-1
position: 7535674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7532466-7532563:-1:exon

position:7532466:-1
position: 7532466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7532563:-1
position: 7532563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7523357-7523471:-1:exon

position:7523357:-1
position: 7523357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7523471:-1
position: 7523471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7522651-7522798:-1:exon

position:7522651:-1
position: 7522651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7522798:-1
position: 7522798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7518602-7518697:-1:exon

position:7518602:-1
position: 7518602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7518697:-1
position: 7518697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7517100-7517263:-1:exon

position:7517100:-1
position: 7517100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7517263:-1
position: 7517263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7515635-7515703:-1:exon

position:7515635:-1
position: 7515635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7515703:-1
position: 7515703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7515441-7515516:-1:exon

position:7515441:-1
position: 7515441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7515516:-1
position: 7515516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7512618-7514358:-1:exon

position:7514358:-1
position: 7514358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FRMD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FRMD7
product: FERM domain containing 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019956511.1
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(7512618..7514358,7515441..7515516,7515635..7515703,7517100..7517263,7518602..7518697,7522651..7522798,7523357..7523471,7532466..7532563,7535596..7535629,7538496..7538538,7539336..7539440,7572412..7572562))
location: region:7512618-7572562:-1
so has part: feature:7572412-7572562:-1:exon
so has part: feature:7539336-7539440:-1:exon
so has part: feature:7538496-7538538:-1:exon
so has part: feature:7535596-7535629:-1:exon
so has part: feature:7532466-7532563:-1:exon
so has part: feature:7523357-7523471:-1:exon
so has part: feature:7522651-7522798:-1:exon
so has part: feature:7518602-7518697:-1:exon
so has part: feature:7517100-7517263:-1:exon
so has part: feature:7515635-7515703:-1:exon
so has part: feature:7515441-7515516:-1:exon
so has part: feature:7512618-7514358:-1:exon

position:7572562:-1
position: 7572562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7572412-7572562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7539336-7539440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7538496-7538538:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7535596-7535629:-1:exon

position:7535629:-1
position: 7535629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7532466-7532563:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7523357-7523471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7522651-7522798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7518602-7518697:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7517100-7517263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7515635-7515703:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7515441-7515516:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7512618-7514358:-1:exon

FRMD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FRMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 7 isoform X2
translation: MLHLKVQFLDDSQKIFVVDQKSSGKALFNLSCSHLNLAEKEYFGLEFCSHSGNNVWLELLKPITKQVKMDPGHLREELTRYLFTLQIKKDLALGRLPCSDNCTALMVSHILQSELGDFHEETDRKHLAQTRYLPNQDDLESKIVHFHQKHIGRSPAESDILLLDIARKLDMYGIRPHPASDGEGMQIHLAVAHMGVLVLRGNTKINTFNWAKIRKLSFKRKHFLIKLHANILVLCKDTLEFTMASRDACKAFWKTCVEYHAFFRLSEEPKSKPKTLLCSKGSSFRYSGRTQRQLLEYGKKGRLKSLPFERKHYPSQYHERQCRSSPDLLSDVSKQVEDLRLGYGSGYYRTVNGVHASEPVLDGRRRNSAVEVTFAAELEHSKPEADPTSLHQSQSSSSFPFIYTDPVFITDPDPDTDPRDYFEERXPLSSFQTSSKFADNPMSTSSGLTSKVSPARQLTYTDVPYIPCTGQQVDIMPPQVFFYVDRPPQVPRRSPIMAEERERPDSCLQSTAVKSAKRSPRNIRMKSFQQDFQELQEAMARTTGRSNVNVDLEEQDPTIEDTFAYNIQEPTPKRSQSQSDMKTIRFPFGSEFRPLGPCPALSRKADLLTYMFAEQEFPTVLMDQGATERYVPSESSDSESEILKPDYYSLYDKGIRSPMARIRLSSGSLQLDEEDEDVSFNTSTAEDRTLQKPCNYFLA
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(7513264..7514358,7515441..7515516,7515635..7515703,7517100..7517263,7518602..7518697,7522651..7522798,7523357..7523471,7532466..7532563,7535596..7535629,7538496..7538538,7539336..7539440,7572412..7572468))
location: region:7513264-7572468:-1
so has part: feature:7572412-7572468:-1:exon
so has part: feature:7539336-7539440:-1:exon
so has part: feature:7538496-7538538:-1:exon
so has part: feature:7535596-7535629:-1:exon
so has part: feature:7532466-7532563:-1:exon
so has part: feature:7523357-7523471:-1:exon
so has part: feature:7522651-7522798:-1:exon
so has part: feature:7518602-7518697:-1:exon
so has part: feature:7517100-7517263:-1:exon
so has part: feature:7515635-7515703:-1:exon
so has part: feature:7515441-7515516:-1:exon
so has part: feature:7513264-7514358:-1:exon

XP_019812070.1
type: Protein
SIO_000068: ncbiprotein

position:7513264:-1
position: 7513264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7572468:-1
position: 7572468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7572412-7572468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7539336-7539440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7538496-7538538:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7535596-7535629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7532466-7532563:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7523357-7523471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7522651-7522798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7518602-7518697:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7517100-7517263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7515635-7515703:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7515441-7515516:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7513264-7514358:-1:exon

FRMD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FRMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 7 isoform X1
translation: MLHLKVQFLDDSQKIFVVDQKSSGKALFNLSCSHLNLAEKEYFGLEFCSHSGNNVWLELLKPITKQVKNPKEVVFKFMVKFFPVDPGHLREELTRYLFTLQIKKDLALGRLPCSDNCTALMVSHILQSELGDFHEETDRKHLAQTRYLPNQDDLESKIVHFHQKHIGRSPAESDILLLDIARKLDMYGIRPHPASDGEGMQIHLAVAHMGVLVLRGNTKINTFNWAKIRKLSFKRKHFLIKLHANILVLCKDTLEFTMASRDACKAFWKTCVEYHAFFRLSEEPKSKPKTLLCSKGSSFRYSGRTQRQLLEYGKKGRLKSLPFERKHYPSQYHERQCRSSPDLLSDVSKQVEDLRLGYGSGYYRTVNGVHASEPVLDGRRRNSAVEVTFAAELEHSKPEADPTSLHQSQSSSSFPFIYTDPVFITDPDPDTDPRDYFEERXPLSSFQTSSKFADNPMSTSSGLTSKVSPARQLTYTDVPYIPCTGQQVDIMPPQVFFYVDRPPQVPRRSPIMAEERERPDSCLQSTAVKSAKRSPRNIRMKSFQQDFQELQEAMARTTGRSNVNVDLEEQDPTIEDTFAYNIQEPTPKRSQSQSDMKTIRFPFGSEFRPLGPCPALSRKADLLTYMFAEQEFPTVLMDQGATERYVPSESSDSESEILKPDYYSLYDKGIRSPMARIRLSSGSLQLDEEDEDVSFNTSTAEDRTLQKPCNYFLA
SIO_010081: FRMD7
subclass of: SO_0000673
so part of: FRMD7
location: complement(join(7513264..7514358,7515441..7515516,7515635..7515703,7517100..7517263,7518602..7518697,7522651..7522798,7523357..7523471,7532466..7532563,7535596..7535674,7538496..7538538,7539336..7539440,7572412..7572468))
location: region:7513264-7572468:-1
so has part: feature:7572412-7572468:-1:exon
so has part: feature:7539336-7539440:-1:exon
so has part: feature:7538496-7538538:-1:exon
so has part: feature:7535596-7535674:-1:exon
so has part: feature:7532466-7532563:-1:exon
so has part: feature:7523357-7523471:-1:exon
so has part: feature:7522651-7522798:-1:exon
so has part: feature:7518602-7518697:-1:exon
so has part: feature:7517100-7517263:-1:exon
so has part: feature:7515635-7515703:-1:exon
so has part: feature:7515441-7515516:-1:exon
so has part: feature:7513264-7514358:-1:exon

XP_019812069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7572412-7572468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7539336-7539440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7538496-7538538:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7535596-7535674:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7532466-7532563:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7523357-7523471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7522651-7522798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7518602-7518697:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7517100-7517263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7515635-7515703:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7515441-7515516:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7513264-7514358:-1:exon

RAP2C
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: RAP2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7608009..7620984)
location: region:7608009-7620984:-1
so has part: feature:7608009-7620984:-1:exon
subclass of: SO_0000010

109555253
type: Gene
SIO_000068: ncbigene

position:7608009:-1
position: 7608009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7620984:-1
position: 7620984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7608009-7620984:-1:exon

RAP2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RAP2C
product: RAP2C, member of RAS oncogene family, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 46 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 262 samples with support for all annotated introns
transcript id: XM_019955974.1
SIO_010081: RAP2C
subclass of: SO_0000673
so part of: RAP2C
location: complement(join(7608009..7610510,7617623..7617941,7620415..7620984))
location: region:7608009-7620984:-1
so has part: feature:7620415-7620984:-1:exon
so has part: feature:7617623-7617941:-1:exon
so has part: feature:7608009-7610510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7620415-7620984:-1:exon

position:7620415:-1
position: 7620415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7617623-7617941:-1:exon

position:7617623:-1
position: 7617623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7617941:-1
position: 7617941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7608009-7610510:-1:exon

position:7610510:-1
position: 7610510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAP2C
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: RAP2C
product: RAP2C, member of RAS oncogene family, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XR_002180245.1
SIO_010081: RAP2C
so part of: RAP2C
location: complement(join(7608009..7610510,7615118..7615207,7617623..7617941,7620415..7620984))
location: region:7608009-7620984:-1
so has part: feature:7620415-7620984:-1:exon
so has part: feature:7617623-7617941:-1:exon
so has part: feature:7615118-7615207:-1:exon
so has part: feature:7608009-7610510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7620415-7620984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7617623-7617941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7615118-7615207:-1:exon

position:7615118:-1
position: 7615118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7615207:-1
position: 7615207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7608009-7610510:-1:exon

RAP2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RAP2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-2c
translation: MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVGNKVDLEPEREVMSSEGRALAQEWGCPFMETSAKSKSMVDELFAEIVRQMNYSSLPEKQDQCCTTCVVQ
SIO_010081: RAP2C
subclass of: SO_0000673
so part of: RAP2C
location: complement(join(7617663..7617941,7620415..7620687))
location: region:7617663-7620687:-1
so has part: feature:7620415-7620687:-1:exon
so has part: feature:7617663-7617941:-1:exon

XP_019811533.1
type: Protein
SIO_000068: ncbiprotein

position:7617663:-1
position: 7617663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7620687:-1
position: 7620687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7620415-7620687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7617663-7617941:-1:exon

MBNL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7773023..7893231)
location: region:7773023-7893231:-1
so has part: feature:7773023-7893231:-1:exon
subclass of: SO_0000010

109555298
type: Gene
SIO_000068: ncbigene

position:7773023:-1
position: 7773023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7893231:-1
position: 7893231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7773023-7893231:-1:exon

MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019956067.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(7773023..7780431,7782214..7782287,7783192..7783286,7786066..7786101,7787551..7787713,7790881..7791117,7792387..7792581,7809907..7810071,7842165..7842395,7842957..7843013,7893036..7893231))
location: region:7773023-7893231:-1
so has part: feature:7893036-7893231:-1:exon
so has part: feature:7842957-7843013:-1:exon
so has part: feature:7842165-7842395:-1:exon
so has part: feature:7809907-7810071:-1:exon
so has part: feature:7792387-7792581:-1:exon
so has part: feature:7790881-7791117:-1:exon
so has part: feature:7787551-7787713:-1:exon
so has part: feature:7786066-7786101:-1:exon
so has part: feature:7783192-7783286:-1:exon
so has part: feature:7782214-7782287:-1:exon
so has part: feature:7773023-7780431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7893036-7893231:-1:exon

position:7893036:-1
position: 7893036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7842957-7843013:-1:exon

position:7842957:-1
position: 7842957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7843013:-1
position: 7843013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7842165-7842395:-1:exon

position:7842165:-1
position: 7842165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7842395:-1
position: 7842395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7809907-7810071:-1:exon

position:7809907:-1
position: 7809907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7810071:-1
position: 7810071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7792387-7792581:-1:exon

position:7792387:-1
position: 7792387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7792581:-1
position: 7792581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7790881-7791117:-1:exon

position:7790881:-1
position: 7790881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7791117:-1
position: 7791117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7787551-7787713:-1:exon

position:7787551:-1
position: 7787551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7787713:-1
position: 7787713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7786066-7786101:-1:exon

position:7786066:-1
position: 7786066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7786101:-1
position: 7786101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7783192-7783286:-1:exon

position:7783192:-1
position: 7783192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7783286:-1
position: 7783286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7782214-7782287:-1:exon

position:7782214:-1
position: 7782214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7782287:-1
position: 7782287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7773023-7780431:-1:exon

position:7780431:-1
position: 7780431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019956066.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(7773023..7780431,7782214..7782287,7783192..7783286,7786066..7786101,7787551..7787713,7790881..7791117,7792387..7792581,7809907..7810071,7842165..7843013,7893036..7893231))
location: region:7773023-7893231:-1
so has part: feature:7893036-7893231:-1:exon
so has part: feature:7842165-7843013:-1:exon
so has part: feature:7809907-7810071:-1:exon
so has part: feature:7792387-7792581:-1:exon
so has part: feature:7790881-7791117:-1:exon
so has part: feature:7787551-7787713:-1:exon
so has part: feature:7786066-7786101:-1:exon
so has part: feature:7783192-7783286:-1:exon
so has part: feature:7782214-7782287:-1:exon
so has part: feature:7773023-7780431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7893036-7893231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842165-7843013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7809907-7810071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7792387-7792581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7790881-7791117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7787551-7787713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7786066-7786101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7783192-7783286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7782214-7782287:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7773023-7780431:-1:exon

MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 37 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019956069.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(7773023..7780431,7783192..7783286,7786066..7786101,7787551..7787713,7790881..7791117,7792387..7792581,7809907..7810071,7842165..7843013,7893036..7893228))
location: region:7773023-7893228:-1
so has part: feature:7893036-7893228:-1:exon
so has part: feature:7842165-7843013:-1:exon
so has part: feature:7809907-7810071:-1:exon
so has part: feature:7792387-7792581:-1:exon
so has part: feature:7790881-7791117:-1:exon
so has part: feature:7787551-7787713:-1:exon
so has part: feature:7786066-7786101:-1:exon
so has part: feature:7783192-7783286:-1:exon
so has part: feature:7773023-7780431:-1:exon

position:7893228:-1
position: 7893228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7893036-7893228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842165-7843013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7809907-7810071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7792387-7792581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7790881-7791117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7787551-7787713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7786066-7786101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7783192-7783286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7773023-7780431:-1:exon

MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019956068.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(7773023..7780431,7782214..7782287,7783192..7783286,7787551..7787713,7790881..7791117,7792387..7792581,7809907..7810071,7842165..7843013,7893036..7893227))
location: region:7773023-7893227:-1
so has part: feature:7893036-7893227:-1:exon
so has part: feature:7842165-7843013:-1:exon
so has part: feature:7809907-7810071:-1:exon
so has part: feature:7792387-7792581:-1:exon
so has part: feature:7790881-7791117:-1:exon
so has part: feature:7787551-7787713:-1:exon
so has part: feature:7783192-7783286:-1:exon
so has part: feature:7782214-7782287:-1:exon
so has part: feature:7773023-7780431:-1:exon

position:7893227:-1
position: 7893227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7893036-7893227:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842165-7843013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7809907-7810071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7792387-7792581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7790881-7791117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7787551-7787713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7783192-7783286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7782214-7782287:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7773023-7780431:-1:exon

MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_019956070.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(7773023..7780431,7783192..7783286,7787551..7787713,7790881..7791117,7792387..7792581,7809907..7810071,7842165..7843013,7893036..7893223))
location: region:7773023-7893223:-1
so has part: feature:7893036-7893223:-1:exon
so has part: feature:7842165-7843013:-1:exon
so has part: feature:7809907-7810071:-1:exon
so has part: feature:7792387-7792581:-1:exon
so has part: feature:7790881-7791117:-1:exon
so has part: feature:7787551-7787713:-1:exon
so has part: feature:7783192-7783286:-1:exon
so has part: feature:7773023-7780431:-1:exon

position:7893223:-1
position: 7893223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7893036-7893223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842165-7843013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7809907-7810071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7792387-7792581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7790881-7791117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7787551-7787713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7783192-7783286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7773023-7780431:-1:exon

MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019956071.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(7773023..7780431,7782214..7782287,7783192..7783286,7786066..7786101,7787551..7787713,7790881..7791117,7792387..7792581,7809907..7810071,7818049..7818150))
location: region:7773023-7818150:-1
so has part: feature:7818049-7818150:-1:exon
so has part: feature:7809907-7810071:-1:exon
so has part: feature:7792387-7792581:-1:exon
so has part: feature:7790881-7791117:-1:exon
so has part: feature:7787551-7787713:-1:exon
so has part: feature:7786066-7786101:-1:exon
so has part: feature:7783192-7783286:-1:exon
so has part: feature:7782214-7782287:-1:exon
so has part: feature:7773023-7780431:-1:exon

position:7818150:-1
position: 7818150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7818049-7818150:-1:exon

position:7818049:-1
position: 7818049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7809907-7810071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7792387-7792581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7790881-7791117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7787551-7787713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7786066-7786101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7783192-7783286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7782214-7782287:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7773023-7780431:-1:exon

MBNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBNL3
product: muscleblind like splicing regulator 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019956072.1
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(7773023..7780431,7782214..7782287,7783192..7783286,7787551..7787713,7790881..7791117,7792387..7792581,7809907..7810071,7818049..7818149))
location: region:7773023-7818149:-1
so has part: feature:7818049-7818149:-1:exon
so has part: feature:7809907-7810071:-1:exon
so has part: feature:7792387-7792581:-1:exon
so has part: feature:7790881-7791117:-1:exon
so has part: feature:7787551-7787713:-1:exon
so has part: feature:7783192-7783286:-1:exon
so has part: feature:7782214-7782287:-1:exon
so has part: feature:7773023-7780431:-1:exon

position:7818149:-1
position: 7818149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7818049-7818149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7809907-7810071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7792387-7792581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7790881-7791117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7787551-7787713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7783192-7783286:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7782214-7782287:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7773023-7780431:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X4
translation: MTAFSIALVRDAKWLTLEVCREFQRGTCSRADADCKFAHPPRICHVENGRVVACFDSLKGRCARENCKYLHPPPHLKTQLEINGRNNLIQQKSAAAMFAQHMQFMFQNAQMPSVNSFPVNPAIAANPAMAYNPYLPHHPGMGLVPAELVQNAPVLISGNPPLPLPGPVGPKPIRSDKLEVCREFQRGNCTRGENDCRYAHPTDVSMIETSDNTVTICMDYIKGRCSREKCKYFHPPAHLQAKLKAAHYQMNHSAATAMGLQPGTLQLIPKRSALEKVSCAPPVFNPNVFHRQQALPNVPMPQPQPQPQFIPTVPMMHSAAPTTMSAAPPPATSIPFVATAPGNQLKF
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(7780420..7780431,7783192..7783286,7787551..7787713,7790881..7791117,7792387..7792581,7809907..7810071,7842165..7842341))
location: region:7780420-7842341:-1
so has part: feature:7842165-7842341:-1:exon
so has part: feature:7809907-7810071:-1:exon
so has part: feature:7792387-7792581:-1:exon
so has part: feature:7790881-7791117:-1:exon
so has part: feature:7787551-7787713:-1:exon
so has part: feature:7783192-7783286:-1:exon
so has part: feature:7780420-7780431:-1:exon

XP_019811629.1
type: Protein
SIO_000068: ncbiprotein

position:7780420:-1
position: 7780420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7842341:-1
position: 7842341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7842165-7842341:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7809907-7810071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7792387-7792581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7790881-7791117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7787551-7787713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7783192-7783286:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7780420-7780431:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X3
translation: MTAFSIALVRDAKWLTLEVCREFQRGTCSRADADCKFAHPPRICHVENGRVVACFDSLKGRCARENCKYLHPPPHLKTQLEINGRNNLIQQKSAAAMFAQHMQFMFQNAQMPSVNSFPVNPAIAANPAMAYNPYLPHHPGMGLVPAELVQNAPVLISGNPPLPLPGPVGPKPIRSDKLEVCREFQRGNCTRGENDCRYAHPTDVSMIETSDNTVTICMDYIKGRCSREKCKYFHPPAHLQAKLKAAHYQMNHSAATAMGLQPGTLQLIPKRSALEKVSCAPPVFNPNVFHRQQALPNVPMPQPQPQPQFIPTGPILCMAPASSVVPMMHSAAPTTMSAAPPPATSIPFVATAPGNQLKF
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(7780420..7780431,7783192..7783286,7786066..7786101,7787551..7787713,7790881..7791117,7792387..7792581,7809907..7810071,7842165..7842341))
location: region:7780420-7842341:-1
so has part: feature:7842165-7842341:-1:exon
so has part: feature:7809907-7810071:-1:exon
so has part: feature:7792387-7792581:-1:exon
so has part: feature:7790881-7791117:-1:exon
so has part: feature:7787551-7787713:-1:exon
so has part: feature:7786066-7786101:-1:exon
so has part: feature:7783192-7783286:-1:exon
so has part: feature:7780420-7780431:-1:exon

XP_019811628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7842165-7842341:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7809907-7810071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7792387-7792581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7790881-7791117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7787551-7787713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7786066-7786101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7783192-7783286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7780420-7780431:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X2
translation: MTAFSIALVRDAKWLTLEVCREFQRGTCSRADADCKFAHPPRICHVENGRVVACFDSLKGRCARENCKYLHPPPHLKTQLEINGRNNLIQQKSAAAMFAQHMQFMFQNAQMPSVNSFPVNPAIAANPAMAYNPYLPHHPGMGLVPAELVQNAPVLISGNPPLPLPGPVGPKPIRSDKLEVCREFQRGNCTRGENDCRYAHPTDVSMIETSDNTVTICMDYIKGRCSREKCKYFHPPAHLQAKLKAAHYQMNHSAATAMGLQPGTLQLIPKRSALEKVSCAPPVFNPNVFHRQQALPNVPMPQPQPQPQFIPTVPMMHSAAPTTMSAAPPPATSIPFVATAPGNQIPPLSVDELNNSMFVTQM
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(7782231..7782287,7783192..7783286,7787551..7787713,7790881..7791117,7792387..7792581,7809907..7810071,7842165..7842341))
location: region:7782231-7842341:-1
so has part: feature:7842165-7842341:-1:exon
so has part: feature:7809907-7810071:-1:exon
so has part: feature:7792387-7792581:-1:exon
so has part: feature:7790881-7791117:-1:exon
so has part: feature:7787551-7787713:-1:exon
so has part: feature:7783192-7783286:-1:exon
so has part: feature:7782231-7782287:-1:exon

XP_019811627.1
type: Protein
SIO_000068: ncbiprotein

position:7782231:-1
position: 7782231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7842165-7842341:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7809907-7810071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7792387-7792581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7790881-7791117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7787551-7787713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7783192-7783286:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7782231-7782287:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X1
translation: MTAFSIALVRDAKWLTLEVCREFQRGTCSRADADCKFAHPPRICHVENGRVVACFDSLKGRCARENCKYLHPPPHLKTQLEINGRNNLIQQKSAAAMFAQHMQFMFQNAQMPSVNSFPVNPAIAANPAMAYNPYLPHHPGMGLVPAELVQNAPVLISGNPPLPLPGPVGPKPIRSDKLEVCREFQRGNCTRGENDCRYAHPTDVSMIETSDNTVTICMDYIKGRCSREKCKYFHPPAHLQAKLKAAHYQMNHSAATAMGLQPGTLQLIPKRSALEKVSCAPPVFNPNVFHRQQALPNVPMPQPQPQPQFIPTGPILCMAPASSVVPMMHSAAPTTMSAAPPPATSIPFVATAPGNQIPPLSVDELNNSMFVTQM
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(7782231..7782287,7783192..7783286,7786066..7786101,7787551..7787713,7790881..7791117,7792387..7792581,7809907..7810071,7842165..7842341))
location: region:7782231-7842341:-1
so has part: feature:7842165-7842341:-1:exon
so has part: feature:7809907-7810071:-1:exon
so has part: feature:7792387-7792581:-1:exon
so has part: feature:7790881-7791117:-1:exon
so has part: feature:7787551-7787713:-1:exon
so has part: feature:7786066-7786101:-1:exon
so has part: feature:7783192-7783286:-1:exon
so has part: feature:7782231-7782287:-1:exon

XP_019811625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7842165-7842341:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7809907-7810071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7792387-7792581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7790881-7791117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7787551-7787713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7786066-7786101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7783192-7783286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7782231-7782287:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X1
translation: MTAFSIALVRDAKWLTLEVCREFQRGTCSRADADCKFAHPPRICHVENGRVVACFDSLKGRCARENCKYLHPPPHLKTQLEINGRNNLIQQKSAAAMFAQHMQFMFQNAQMPSVNSFPVNPAIAANPAMAYNPYLPHHPGMGLVPAELVQNAPVLISGNPPLPLPGPVGPKPIRSDKLEVCREFQRGNCTRGENDCRYAHPTDVSMIETSDNTVTICMDYIKGRCSREKCKYFHPPAHLQAKLKAAHYQMNHSAATAMGLQPGTLQLIPKRSALEKVSCAPPVFNPNVFHRQQALPNVPMPQPQPQPQFIPTGPILCMAPASSVVPMMHSAAPTTMSAAPPPATSIPFVATAPGNQIPPLSVDELNNSMFVTQM
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(7782231..7782287,7783192..7783286,7786066..7786101,7787551..7787713,7790881..7791117,7792387..7792581,7809907..7810071,7842165..7842341))
location: region:7782231-7842341:-1
so has part: feature:7842165-7842341:-1:exon
so has part: feature:7809907-7810071:-1:exon
so has part: feature:7792387-7792581:-1:exon
so has part: feature:7790881-7791117:-1:exon
so has part: feature:7787551-7787713:-1:exon
so has part: feature:7786066-7786101:-1:exon
so has part: feature:7783192-7783286:-1:exon
so has part: feature:7782231-7782287:-1:exon

XP_019811626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7842165-7842341:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7809907-7810071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7792387-7792581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7790881-7791117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7787551-7787713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7786066-7786101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7783192-7783286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7782231-7782287:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X6
translation: MEGAAYDLKGRCARENCKYLHPPPHLKTQLEINGRNNLIQQKSAAAMFAQHMQFMFQNAQMPSVNSFPVNPAIAANPAMAYNPYLPHHPGMGLVPAELVQNAPVLISGNPPLPLPGPVGPKPIRSDKLEVCREFQRGNCTRGENDCRYAHPTDVSMIETSDNTVTICMDYIKGRCSREKCKYFHPPAHLQAKLKAAHYQMNHSAATAMGLQPGTLQLIPKRSALEKVSCAPPVFNPNVFHRQQALPNVPMPQPQPQPQFIPTVPMMHSAAPTTMSAAPPPATSIPFVATAPGNQIPPLSVDELNNSMFVTQM
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(7782231..7782287,7783192..7783286,7787551..7787713,7790881..7791117,7792387..7792581,7809907..7810071,7818049..7818075))
location: region:7782231-7818075:-1
so has part: feature:7818049-7818075:-1:exon
so has part: feature:7809907-7810071:-1:exon
so has part: feature:7792387-7792581:-1:exon
so has part: feature:7790881-7791117:-1:exon
so has part: feature:7787551-7787713:-1:exon
so has part: feature:7783192-7783286:-1:exon
so has part: feature:7782231-7782287:-1:exon

XP_019811631.1
type: Protein
SIO_000068: ncbiprotein

position:7818075:-1
position: 7818075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7818049-7818075:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7809907-7810071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7792387-7792581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7790881-7791117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7787551-7787713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7783192-7783286:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7782231-7782287:-1:exon

MBNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 3 isoform X5
translation: MEGAAYDLKGRCARENCKYLHPPPHLKTQLEINGRNNLIQQKSAAAMFAQHMQFMFQNAQMPSVNSFPVNPAIAANPAMAYNPYLPHHPGMGLVPAELVQNAPVLISGNPPLPLPGPVGPKPIRSDKLEVCREFQRGNCTRGENDCRYAHPTDVSMIETSDNTVTICMDYIKGRCSREKCKYFHPPAHLQAKLKAAHYQMNHSAATAMGLQPGTLQLIPKRSALEKVSCAPPVFNPNVFHRQQALPNVPMPQPQPQPQFIPTGPILCMAPASSVVPMMHSAAPTTMSAAPPPATSIPFVATAPGNQIPPLSVDELNNSMFVTQM
SIO_010081: MBNL3
subclass of: SO_0000673
so part of: MBNL3
location: complement(join(7782231..7782287,7783192..7783286,7786066..7786101,7787551..7787713,7790881..7791117,7792387..7792581,7809907..7810071,7818049..7818075))
location: region:7782231-7818075:-1
so has part: feature:7818049-7818075:-1:exon
so has part: feature:7809907-7810071:-1:exon
so has part: feature:7792387-7792581:-1:exon
so has part: feature:7790881-7791117:-1:exon
so has part: feature:7787551-7787713:-1:exon
so has part: feature:7786066-7786101:-1:exon
so has part: feature:7783192-7783286:-1:exon
so has part: feature:7782231-7782287:-1:exon

XP_019811630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7818049-7818075:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7809907-7810071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7792387-7792581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7790881-7791117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7787551-7787713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7786066-7786101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7783192-7783286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7782231-7782287:-1:exon

LOC109554765
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7927320..7927617)
location: region:7927320-7927617:-1
so has part: feature:7927320-7927617:-1:exon

109554765
type: Gene
SIO_000068: ncbigene

position:7927320:-1
position: 7927320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7927617:-1
position: 7927617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7927320-7927617:-1:exon

LOC109554765
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554765
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC109554765
subclass of: SO_0000673
so part of: LOC109554765
location: complement(7927320..7927617)
location: region:7927320-7927617:-1
so has part: feature:7927320-7927617:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7927320-7927617:-1:exon

HS6ST2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: HS6ST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8062183..8065615)
location: region:8062183-8065615:-1
so has part: feature:8062183-8065615:-1:exon
subclass of: SO_0000010

109554766
type: Gene
SIO_000068: ncbigene

position:8062183:-1
position: 8062183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8065615:-1
position: 8065615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8062183-8065615:-1:exon

HS6ST2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: HS6ST2
product: heparan sulfate 6-O-sulfotransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019955402.1
SIO_010081: HS6ST2
subclass of: SO_0000673
so part of: HS6ST2
location: complement(8062183..8065615)
location: region:8062183-8065615:-1
so has part: feature:8062183-8065615:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8062183-8065615:-1:exon

HS6ST2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: HS6ST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparan-sulfate 6-O-sulfotransferase 2
translation: MPCPFPDSTYVSYSPDHWPLCFVHRNFHYITILRDPVSRYLSEWRHVQRGATWKASLHVCDGRPPTSEELPSCYTGDDWSGCPLKEFMDCPYNLANNRQVRMLSDLTLVGCYNLSVMPEKQRNKVLLESAKSNLKHMAFFGLTEFQRKTQYLFEKTFNMNFISPFTQYNTTRASSVEINDELQKRIEGLNFLDMELYSYAKDLFLQRYQFMRQKEHQEARRKRQEQRKFLKGRFLQTHYQTQSQGQNPNPSQNPSQNPNLNASQSGTQNLFQNLIQNLTQSSGQNPSPKENQESQKQNSGQEQSDGNTSNGTHDYIGSVEKWR
SIO_010081: HS6ST2
subclass of: SO_0000673
so part of: HS6ST2
location: complement(8064644..8065615)
location: region:8064644-8065615:-1
so has part: feature:8064644-8065615:-1:exon

XP_019810961.1
type: Protein
SIO_000068: ncbiprotein

position:8064644:-1
position: 8064644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8064644-8065615:-1:exon

GPC4
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: GPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8078304..8190600)
location: region:8078304-8190600:-1
so has part: feature:8078304-8190600:-1:exon
subclass of: SO_0000010

109555359
type: Gene
SIO_000068: ncbigene

position:8078304:-1
position: 8078304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8190600:-1
position: 8190600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8078304-8190600:-1:exon

GPC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: GPC4
product: glypican 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 19 ESTs, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 211 samples with support for all annotated introns
transcript id: XM_019956178.1
SIO_010081: GPC4
subclass of: SO_0000673
so part of: GPC4
location: complement(join(8078304..8080387,8080499..8080674,8081316..8081452,8082134..8082280,8082365..8082495,8087631..8087796,8100220..8100611,8115357..8115515,8190133..8190600))
location: region:8078304-8190600:-1
so has part: feature:8190133-8190600:-1:exon
so has part: feature:8115357-8115515:-1:exon
so has part: feature:8100220-8100611:-1:exon
so has part: feature:8087631-8087796:-1:exon
so has part: feature:8082365-8082495:-1:exon
so has part: feature:8082134-8082280:-1:exon
so has part: feature:8081316-8081452:-1:exon
so has part: feature:8080499-8080674:-1:exon
so has part: feature:8078304-8080387:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8190133-8190600:-1:exon

position:8190133:-1
position: 8190133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8115357-8115515:-1:exon

position:8115357:-1
position: 8115357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8115515:-1
position: 8115515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8100220-8100611:-1:exon

position:8100220:-1
position: 8100220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8100611:-1
position: 8100611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8087631-8087796:-1:exon

position:8087631:-1
position: 8087631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8087796:-1
position: 8087796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8082365-8082495:-1:exon

position:8082365:-1
position: 8082365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8082495:-1
position: 8082495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8082134-8082280:-1:exon

position:8082134:-1
position: 8082134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8082280:-1
position: 8082280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8081316-8081452:-1:exon

position:8081316:-1
position: 8081316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8081452:-1
position: 8081452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8080499-8080674:-1:exon

position:8080499:-1
position: 8080499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8080674:-1
position: 8080674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8078304-8080387:-1:exon

position:8080387:-1
position: 8080387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: GPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-4
translation: MARFGLPALFCTLAALSAALLAAEPKSKSCSEVRRLYVSKGFDKNDAPMHEINGDHLKICLQGYTCCSQEMEEKYSLQSKEDFKSVVSEQCNHLQAVFASRYKKFDEFFKELLENAEKSLNDMFVKTYGHLYMQNSELFKDLFEELKRYYVAGNVNLEEMLNDFWARLLERMFRLVNSQYHFTDEYLECVSKYTEQLKPFGDVPRKLKLQVTRAFVAARTFAQGLAVARDVVSKVSVVNPTTQCTHALVKMMYCSHCQGLVTVKPCYNYCSNIMRGCLANQGDLDLEWNNFIDAMLMVAERLEGPFNIESVMDPIDVKISDAIMNMQENSVQVSQKVFQGCGPPKPLPAGRISRSISEGTFSARFRPFHPEERPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPSSVCNDERMAAGSGNEDDCWNGKGQSRYLFAVTGNGLANQGNNPEVQVDTSKPDILILRQVMALRVMTSKMKNAYNGNDVDFFDISDESSGEGSGSGCESQQCPSEFEYNATDHSGKSANDKASSAGVPAAAWPYLLPVFCILSLVMQREXR
SIO_010081: GPC4
subclass of: SO_0000673
so part of: GPC4
location: complement(join(8080185..8080387,8080499..8080674,8081316..8081452,8082134..8082280,8082365..8082495,8087631..8087796,8100220..8100611,8115357..8115515,8190133..8190292))
location: region:8080185-8190292:-1
so has part: feature:8190133-8190292:-1:exon
so has part: feature:8115357-8115515:-1:exon
so has part: feature:8100220-8100611:-1:exon
so has part: feature:8087631-8087796:-1:exon
so has part: feature:8082365-8082495:-1:exon
so has part: feature:8082134-8082280:-1:exon
so has part: feature:8081316-8081452:-1:exon
so has part: feature:8080499-8080674:-1:exon
so has part: feature:8080185-8080387:-1:exon

XP_019811737.1
type: Protein
SIO_000068: ncbiprotein

position:8080185:-1
position: 8080185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8190292:-1
position: 8190292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8190133-8190292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8115357-8115515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8100220-8100611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8087631-8087796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8082365-8082495:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8082134-8082280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8081316-8081452:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8080499-8080674:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8080185-8080387:-1:exon

GPC3
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: GPC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8299942..8575290)
location: region:8299942-8575290:-1
so has part: feature:8299942-8575290:-1:exon
subclass of: SO_0000010

109555423
type: Gene
SIO_000068: ncbigene

position:8299942:-1
position: 8299942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8575290:-1
position: 8575290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8299942-8575290:-1:exon

GPC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: GPC3
product: glypican 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 mRNAs, 28 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_019956287.1
SIO_010081: GPC3
subclass of: SO_0000673
so part of: GPC3
location: complement(join(8299942..8300457,8360818..8360977,8417468..8417588,8449144..8449269,8460084..8460217,8518660..8519354,8575218..8575290))
location: region:8299942-8575290:-1
so has part: feature:8575218-8575290:-1:exon
so has part: feature:8518660-8519354:-1:exon
so has part: feature:8460084-8460217:-1:exon
so has part: feature:8449144-8449269:-1:exon
so has part: feature:8417468-8417588:-1:exon
so has part: feature:8360818-8360977:-1:exon
so has part: feature:8299942-8300457:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8575218-8575290:-1:exon

position:8575218:-1
position: 8575218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8518660-8519354:-1:exon

position:8518660:-1
position: 8518660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8519354:-1
position: 8519354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8460084-8460217:-1:exon

position:8460084:-1
position: 8460084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8460217:-1
position: 8460217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8449144-8449269:-1:exon

position:8449144:-1
position: 8449144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8449269:-1
position: 8449269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8417468-8417588:-1:exon

position:8417468:-1
position: 8417468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8417588:-1
position: 8417588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8360818-8360977:-1:exon

position:8360818:-1
position: 8360818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8360977:-1
position: 8360977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8299942-8300457:-1:exon

position:8300457:-1
position: 8300457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: GPC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-3
translation: MFKNNYPSLTPQAFDFVGEFFTDVSLYILGSDINVDDMVNELFDSLFPVIYTQLMNPGLPESTLDINECLRGARRDLKVFGNFPKLIMTQVSKSLQVTRIFLQALNLGIEVINTTDHLKFSKDCGRMLTRMWYCSYCQGLMMVKPCGGYCNVVMQGCMAGVVEIDKYWREYILSLEELVNGMYRVYDMENVLLGLFSTIHDSIQYVQKNGGKLTTTIGKLCAHSQQRQYRSAYYPEDLFIDKKVLKVARVEREETLSSRRRELIQKLKSFISFYSALPGYICSHSPVAENDTLCWNGQELVERYSQKAARNGMKNQFNLHELKMKGPEPVVSQIIDKLKHINQLLRTMSVPKGRVLDKNLDEEGLESGDCGDDEDECIGGSGDGMMKVKNQLRFLAELAYDLDVDDAPGSKQHVNQKDNEIVASHNLGNGHPPLKLLTSLAISVLCFFLLVH
SIO_010081: GPC3
subclass of: SO_0000673
so part of: GPC3
location: complement(join(8300288..8300457,8360818..8360977,8417468..8417588,8449144..8449269,8460084..8460217,8518660..8519307))
location: region:8300288-8519307:-1
so has part: feature:8518660-8519307:-1:exon
so has part: feature:8460084-8460217:-1:exon
so has part: feature:8449144-8449269:-1:exon
so has part: feature:8417468-8417588:-1:exon
so has part: feature:8360818-8360977:-1:exon
so has part: feature:8300288-8300457:-1:exon

XP_019811846.1
type: Protein
SIO_000068: ncbiprotein

position:8300288:-1
position: 8300288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8519307:-1
position: 8519307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8518660-8519307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8460084-8460217:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8449144-8449269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8417468-8417588:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8360818-8360977:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8300288-8300457:-1:exon

LOC109555424
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555424
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8563661..8564991
location: region:8563661-8564991:1
so has part: feature:8563661-8564991:1:exon
subclass of: SO_0000010

109555424
type: Gene
SIO_000068: ncbigene

position:8563661:1
position: 8563661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8564991:1
position: 8564991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8563661-8564991:1:exon

LOC109555424
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109555424
product: uncharacterized LOC109555424
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019956288.1
SIO_010081: LOC109555424
subclass of: SO_0000673
so part of: LOC109555424
location: join(8563661..8564467,8564632..8564991)
location: region:8563661-8564991:1
so has part: feature:8563661-8564467:1:exon
so has part: feature:8564632-8564991:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8563661-8564467:1:exon

position:8564467:1
position: 8564467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8564632-8564991:1:exon

position:8564632:1
position: 8564632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109555424
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109555424
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109555424
translation: MFSGKSNWEGSLMVVAKALLFSNQSTWTPLHPPRPHGCSQXALCDVSSVRATIGWRNFLLTNQTDSCGSXLSCDGIYRDARRLGGGHRCYNMADLIKEVKEEETEIEIDAFNLQQQASSANEXKRKNTDQSDGLDSQKIRKPTRKVKSTLQRNPGRKKKGKXSXNPVFYHHPQNKKKNESGPMADEEXPEDSSNTSDDSASKPLCPPGAQDAEPSAVTPGKAKAE
SIO_010081: LOC109555424
subclass of: SO_0000673
so part of: LOC109555424
location: join(8564054..8564467,8564632..8564895)
location: region:8564054-8564895:1
so has part: feature:8564054-8564467:1:exon
so has part: feature:8564632-8564895:1:exon

XP_019811847.1
type: Protein
SIO_000068: ncbiprotein

position:8564054:1
position: 8564054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8564895:1
position: 8564895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8564054-8564467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8564632-8564895:1:exon

LOC109554767
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8704502..8704804
location: region:8704502-8704804:1
so has part: feature:8704502-8704804:1:exon

109554767
type: Gene
SIO_000068: ncbigene

position:8704502:1
position: 8704502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8704804:1
position: 8704804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8704502-8704804:1:exon

LOC109554767
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554767
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109554767
subclass of: SO_0000673
so part of: LOC109554767
location: 8704502..8704804
location: region:8704502-8704804:1
so has part: feature:8704502-8704804:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8704502-8704804:1:exon

LOC109554768
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8704807..8705225
location: region:8704807-8705225:1
so has part: feature:8704807-8705225:1:exon

109554768
type: Gene
SIO_000068: ncbigene

position:8704807:1
position: 8704807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8705225:1
position: 8705225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8704807-8705225:1:exon

LOC109554768
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109554768
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109554768
subclass of: SO_0000673
so part of: LOC109554768
location: 8704807..8705225
location: region:8704807-8705225:1
so has part: feature:8704807-8705225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8704807-8705225:1:exon

LOC109554993
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554993
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8730578..8783933
location: region:8730578-8783933:1
so has part: feature:8730578-8783933:1:exon
subclass of: SO_0000010

109554993
type: Gene
SIO_000068: ncbigene

position:8730578:1
position: 8730578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8783933:1
position: 8783933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8730578-8783933:1:exon

LOC109554993
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109554993
product: protein FAM122C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019955552.1
SIO_010081: LOC109554993
subclass of: SO_0000673
so part of: LOC109554993
location: join(8730578..8731070,8738299..8738377,8765829..8765921,8768832..8768929,8783822..8783933)
location: region:8730578-8783933:1
so has part: feature:8730578-8731070:1:exon
so has part: feature:8738299-8738377:1:exon
so has part: feature:8765829-8765921:1:exon
so has part: feature:8768832-8768929:1:exon
so has part: feature:8783822-8783933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8730578-8731070:1:exon

position:8731070:1
position: 8731070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8738299-8738377:1:exon

position:8738299:1
position: 8738299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8738377:1
position: 8738377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8765829-8765921:1:exon

position:8765829:1
position: 8765829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8765921:1
position: 8765921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8768832-8768929:1:exon

position:8768832:1
position: 8768832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8768929:1
position: 8768929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8783822-8783933:1:exon

position:8783822:1
position: 8783822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109554993
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109554993
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM122C-like
translation: MELHLEVLPSSTTTEDNTLRRSSSAPLISGLGDNSQLLQSDSITTRRNSATCMTQHSLKNNEVQKPSSANCTDLIPASAAVSLTEVTGKVK
SIO_010081: LOC109554993
subclass of: SO_0000673
so part of: LOC109554993
location: join(8730976..8731070,8738299..8738377,8765829..8765921,8768832..8768840)
location: region:8730976-8768840:1
so has part: feature:8730976-8731070:1:exon
so has part: feature:8738299-8738377:1:exon
so has part: feature:8765829-8765921:1:exon
so has part: feature:8768832-8768840:1:exon

XP_019811111.1
type: Protein
SIO_000068: ncbiprotein

position:8730976:1
position: 8730976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8768840:1
position: 8768840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8730976-8731070:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8738299-8738377:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8765829-8765921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8768832-8768840:1:exon

MOSPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: MOSPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8807497..8832146)
location: region:8807497-8832146:-1
so has part: feature:8807497-8832146:-1:exon
subclass of: SO_0000010

109555374
type: Gene
SIO_000068: ncbigene

position:8807497:-1
position: 8807497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8832146:-1
position: 8832146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8807497-8832146:-1:exon

MOSPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MOSPD1
product: motile sperm domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 38 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 242 samples with support for all annotated introns
transcript id: XM_019956207.1
SIO_010081: MOSPD1
subclass of: SO_0000673
so part of: MOSPD1
location: complement(join(8807497..8809300,8811754..8811915,8817110..8817327,8818765..8818840,8818951..8819206,8832018..8832146))
location: region:8807497-8832146:-1
so has part: feature:8832018-8832146:-1:exon
so has part: feature:8818951-8819206:-1:exon
so has part: feature:8818765-8818840:-1:exon
so has part: feature:8817110-8817327:-1:exon
so has part: feature:8811754-8811915:-1:exon
so has part: feature:8807497-8809300:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8832018-8832146:-1:exon

position:8832018:-1
position: 8832018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8818951-8819206:-1:exon

position:8818951:-1
position: 8818951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8819206:-1
position: 8819206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8818765-8818840:-1:exon

position:8818765:-1
position: 8818765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8818840:-1
position: 8818840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8817110-8817327:-1:exon

position:8817110:-1
position: 8817110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8817327:-1
position: 8817327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8811754-8811915:-1:exon

position:8811754:-1
position: 8811754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8811915:-1
position: 8811915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8807497-8809300:-1:exon

position:8809300:-1
position: 8809300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MOSPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MOSPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: motile sperm domain-containing protein 1
translation: MHQQKRQPELVEGNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKPQCCMDIVIRHRDVRSCHYGVIDKFRLQVSEQSQRKALGRKEVVATLLPSAKXQQKEEEEKRIKEHLTESLFFEQSFQPENRTVSSGPSLLTVFLAVVCITALMLPTLGDVESLVPLYLHLSVNQKLVAAYILGLITMAIFRT
SIO_010081: MOSPD1
subclass of: SO_0000673
so part of: MOSPD1
location: complement(join(8809269..8809300,8811754..8811915,8817110..8817327,8818765..8818840,8818951..8819104))
location: region:8809269-8819104:-1
so has part: feature:8818951-8819104:-1:exon
so has part: feature:8818765-8818840:-1:exon
so has part: feature:8817110-8817327:-1:exon
so has part: feature:8811754-8811915:-1:exon
so has part: feature:8809269-8809300:-1:exon

XP_019811766.1
type: Protein
SIO_000068: ncbiprotein

position:8809269:-1
position: 8809269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8819104:-1
position: 8819104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8818951-8819104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8818765-8818840:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8817110-8817327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8811754-8811915:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8809269-8809300:-1:exon

LOC109555531
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8878629..8882499)
location: region:8878629-8882499:-1
so has part: feature:8878629-8882499:-1:exon
subclass of: SO_0000011

109555531
type: Gene
SIO_000068: ncbigene

position:8878629:-1
position: 8878629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8882499:-1
position: 8882499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8878629-8882499:-1:exon

LOC109555531
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109555531
product: uncharacterized LOC109555531
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 239 samples with support for all annotated introns
transcript id: XR_002180284.1
SIO_010081: LOC109555531
subclass of: SO_0000673
so part of: LOC109555531
location: complement(join(8878629..8879239,8882324..8882499))
location: region:8878629-8882499:-1
so has part: feature:8882324-8882499:-1:exon
so has part: feature:8878629-8879239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8882324-8882499:-1:exon

position:8882324:-1
position: 8882324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8878629-8879239:-1:exon

position:8879239:-1
position: 8879239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109555460
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555460
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8910455..8912296
location: region:8910455-8912296:1
so has part: feature:8910455-8912296:1:exon
subclass of: SO_0000010

109555460
type: Gene
SIO_000068: ncbigene

position:8910455:1
position: 8910455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8912296:1
position: 8912296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8910455-8912296:1:exon

LOC109555460
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109555460
product: small integral membrane protein 10-like protein 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 50 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019956363.1
SIO_010081: LOC109555460
subclass of: SO_0000673
so part of: LOC109555460
location: 8910455..8912296
location: region:8910455-8912296:1
so has part: feature:8910455-8912296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8910455-8912296:1:exon

LOC109555460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109555460
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 10-like protein 2A
translation: MAATAALSGVAMRLSRSATTRGSYGAFCKGLTRTLITFFDLAWRLRMNFPYXYIVASVILNVRLQVHI
SIO_010081: LOC109555460
subclass of: SO_0000673
so part of: LOC109555460
location: 8910725..8910931
location: region:8910725-8910931:1
so has part: feature:8910725-8910931:1:exon

XP_019811922.1
type: Protein
SIO_000068: ncbiprotein

position:8910725:1
position: 8910725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8910931:1
position: 8910931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8910725-8910931:1:exon

LOC109554769
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554769
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9002056..9002606
location: region:9002056-9002606:1
so has part: feature:9002056-9002606:1:exon
subclass of: SO_0000010

109554769
type: Gene
SIO_000068: ncbigene

position:9002056:1
position: 9002056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9002606:1
position: 9002606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9002056-9002606:1:exon

LOC109554769
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109554769
product: protein FAM127-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019955403.1
SIO_010081: LOC109554769
subclass of: SO_0000673
so part of: LOC109554769
location: join(9002056..9002330,9002522..9002606)
location: region:9002056-9002606:1
so has part: feature:9002056-9002330:1:exon
so has part: feature:9002522-9002606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9002056-9002330:1:exon

position:9002330:1
position: 9002330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9002522-9002606:1:exon

position:9002522:1
position: 9002522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109554769
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109554769
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM127-like
translation: MDGRVQLIKALLALPIRPQTRRWRNPIPFPETFDGDTDRLPEFIVQTGAYMLVDENLFTNDALKVTFLITRMTGSPQASSRRVPPHLRVAAISPVLVSPPA
SIO_010081: LOC109554769
subclass of: SO_0000673
so part of: LOC109554769
location: join(9002110..9002330,9002522..9002606)
location: region:9002110-9002606:1
so has part: feature:9002110-9002330:1:exon
so has part: feature:9002522-9002606:1:exon

XP_019810962.1
type: Protein
SIO_000068: ncbiprotein

position:9002110:1
position: 9002110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9002110-9002330:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9002522-9002606:1:exon

LOC109555245
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9012790..9014207)
location: region:9012790-9014207:-1
so has part: feature:9012790-9014207:-1:exon
subclass of: SO_0000010

109555245
type: Gene
SIO_000068: ncbigene

position:9012790:-1
position: 9012790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9014207:-1
position: 9014207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9012790-9014207:-1:exon

LOC109555245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109555245
product: protein FAM127
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 99 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019955958.1
SIO_010081: LOC109555245
subclass of: SO_0000673
so part of: LOC109555245
location: complement(9012790..9014207)
location: region:9012790-9014207:-1
so has part: feature:9012790-9014207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9012790-9014207:-1:exon

LOC109555245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109555245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM127
translation: MDGRVQLIKALLALPIRPQTRRWRNPIPFPETFDGDTDRLPEFIVQTGAYMLVDENLFTNDALKVTFLITRMTGPALQWVIPYIRKQSPLLNDYRGFLAEMKRVFGWVEDEDF
SIO_010081: LOC109555245
subclass of: SO_0000673
so part of: LOC109555245
location: complement(9013605..9013946)
location: region:9013605-9013946:-1
so has part: feature:9013605-9013946:-1:exon

XP_019811517.1
type: Protein
SIO_000068: ncbiprotein

position:9013605:-1
position: 9013605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9013946:-1
position: 9013946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9013605-9013946:-1:exon

LOC109555244
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9025073..9039245
location: region:9025073-9039245:1
so has part: feature:9025073-9039245:1:exon

109555244
type: Gene
SIO_000068: ncbigene

position:9025073:1
position: 9025073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9039245:1
position: 9039245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9025073-9039245:1:exon

LOC109555244
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109555244
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC109555244
subclass of: SO_0000673
so part of: LOC109555244
location: 9025073..9026306
location: region:9025073-9026306:1
so has part: feature:9025073-9026306:1:exon

position:9026306:1
position: 9026306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9025073-9026306:1:exon

LOC109555244
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109555244
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC109555244
subclass of: SO_0000673
so part of: LOC109555244
location: 9027686..9027777
location: region:9027686-9027777:1
so has part: feature:9027686-9027777:1:exon

position:9027686:1
position: 9027686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9027777:1
position: 9027777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9027686-9027777:1:exon

LOC109555244
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109555244
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC109555244
subclass of: SO_0000673
so part of: LOC109555244
location: 9033754..9033875
location: region:9033754-9033875:1
so has part: feature:9033754-9033875:1:exon

position:9033754:1
position: 9033754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9033875:1
position: 9033875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9033754-9033875:1:exon

LOC109555244
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109555244
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC109555244
subclass of: SO_0000673
so part of: LOC109555244
location: 9037606..9037728
location: region:9037606-9037728:1
so has part: feature:9037606-9037728:1:exon

position:9037606:1
position: 9037606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9037728:1
position: 9037728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9037606-9037728:1:exon

LOC109555244
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109555244
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC109555244
subclass of: SO_0000673
so part of: LOC109555244
location: 9038133..9038219
location: region:9038133-9038219:1
so has part: feature:9038133-9038219:1:exon

position:9038133:1
position: 9038133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9038219:1
position: 9038219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9038133-9038219:1:exon

LOC109555244
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109555244
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC109555244
subclass of: SO_0000673
so part of: LOC109555244
location: 9038626..9039245
location: region:9038626-9039245:1
so has part: feature:9038626-9039245:1:exon

position:9038626:1
position: 9038626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9038626-9039245:1:exon

LOC109555375
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109555375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9042946..9044173)
location: region:9042946-9044173:-1
so has part: feature:9042946-9044173:-1:exon
subclass of: SO_0000010

109555375
type: Gene
SIO_000068: ncbigene

position:9042946:-1
position: 9042946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9044173:-1
position: 9044173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9042946-9044173:-1:exon

LOC109555375
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109555375
product: protein FAM127
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 137 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019956208.1
SIO_010081: LOC109555375
subclass of: SO_0000673
so part of: LOC109555375
location: complement(9042946..9044173)
location: region:9042946-9044173:-1
so has part: feature:9042946-9044173:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9042946-9044173:-1:exon

LOC109555375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109555375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM127
translation: MDGRVQLIKALLALPIRPQTRRWRNPIPFPETFDGDTDRLPEFIVQTGAYMLVDENLFTNDALKVTFLITRMTGPALQWVIPYIRKQSPLLNDYRGFLAEMKRVFGWVEDEDF
SIO_010081: LOC109555375
subclass of: SO_0000673
so part of: LOC109555375
location: complement(9043766..9044107)
location: region:9043766-9044107:-1
so has part: feature:9043766-9044107:-1:exon

XP_019811767.1
type: Protein
SIO_000068: ncbiprotein

position:9043766:-1
position: 9043766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9044107:-1
position: 9044107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9043766-9044107:-1:exon

CT55
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CT55
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9084972..9097254)
location: region:9084972-9097254:-1
so has part: feature:9084972-9097254:-1:exon
subclass of: SO_0000010

109554770
type: Gene
SIO_000068: ncbigene

position:9084972:-1
position: 9084972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9097254:-1
position: 9097254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9084972-9097254:-1:exon

CT55
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CT55
product: cancer/testis antigen 55
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019955404.1
SIO_010081: CT55
subclass of: SO_0000673
so part of: CT55
location: complement(join(9084972..9085163,9086627..9086739,9091395..9091539,9094005..9094189,9097164..9097254))
location: region:9084972-9097254:-1
so has part: feature:9097164-9097254:-1:exon
so has part: feature:9094005-9094189:-1:exon
so has part: feature:9091395-9091539:-1:exon
so has part: feature:9086627-9086739:-1:exon
so has part: feature:9084972-9085163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9097164-9097254:-1:exon

position:9097164:-1
position: 9097164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9094005-9094189:-1:exon

position:9094005:-1
position: 9094005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9094189:-1
position: 9094189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9091395-9091539:-1:exon

position:9091395:-1
position: 9091395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9091539:-1
position: 9091539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9086627-9086739:-1:exon

position:9086627:-1
position: 9086627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9086739:-1
position: 9086739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9084972-9085163:-1:exon

position:9085163:-1
position: 9085163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CT55
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CT55
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cancer/testis antigen 55
translation: MLRFISRALAFWRKVDSSEAERAQHQRLLEGHTKLKTVQGVVTKFCSNYGLIDELIYFSGDVVTGNVLLKVGQKVTAVVEENKTSHGLKAIKVDAFCDNSHGDELPDSCTRISLGCMNSLMEGVEFIHHTAYFSLDVVCKDFEPYQGDRVEVVFSIQPDTQSRKALSVKPLRHKHVHKVCITSLQGRNGVLDDTIFFTLESLKVPDGYEPQVSDMVDAVVVESVQSCYVWRAISMTLVKKG
SIO_010081: CT55
subclass of: SO_0000673
so part of: CT55
location: complement(join(9084972..9085163,9086627..9086739,9091395..9091539,9094005..9094189,9097164..9097254))
location: region:9084972-9097254:-1
so has part: feature:9097164-9097254:-1:exon
so has part: feature:9094005-9094189:-1:exon
so has part: feature:9091395-9091539:-1:exon
so has part: feature:9086627-9086739:-1:exon
so has part: feature:9084972-9085163:-1:exon

XP_019810963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9097164-9097254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9094005-9094189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9091395-9091539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9086627-9086739:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9084972-9085163:-1:exon

LOC109554771
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554771
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9105409..9109126
location: region:9105409-9109126:1
so has part: feature:9105409-9109126:1:exon
subclass of: SO_0000010

109554771
type: Gene
SIO_000068: ncbigene

position:9105409:1
position: 9105409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9109126:1
position: 9109126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9105409-9109126:1:exon

LOC109554771
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109554771
product: small integral membrane protein 10-like protein 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019955405.1
SIO_010081: LOC109554771
subclass of: SO_0000673
so part of: LOC109554771
location: join(9105409..9105442,9108359..9108452,9108666..9109126)
location: region:9105409-9109126:1
so has part: feature:9105409-9105442:1:exon
so has part: feature:9108359-9108452:1:exon
so has part: feature:9108666-9109126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9105409-9105442:1:exon

position:9105442:1
position: 9105442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9108359-9108452:1:exon

position:9108359:1
position: 9108359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9108452:1
position: 9108452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9108666-9109126:1:exon

position:9108666:1
position: 9108666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109554771
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109554771
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 10-like protein 2A
translation: MTYKEDMFHNQGXGAELSLDSSGLALDVAEAAVGDHPPRGDRRRGSYGAFCKGLTRTLIXFFDLAWRLRMNFPYFYIVASVMLNVRLQVRIE
SIO_010081: LOC109554771
subclass of: SO_0000673
so part of: LOC109554771
location: join(9105409..9105442,9108359..9108452,9108666..9108816)
location: region:9105409-9108816:1
so has part: feature:9105409-9105442:1:exon
so has part: feature:9108359-9108452:1:exon
so has part: feature:9108666-9108816:1:exon

XP_019810964.1
type: Protein
SIO_000068: ncbiprotein

position:9108816:1
position: 9108816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9105409-9105442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9108359-9108452:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9108666-9108816:1:exon

LOC109554772
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109554772
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9245645..9320399
location: region:9245645-9320399:1
so has part: feature:9245645-9320399:1:exon
subclass of: SO_0000010

109554772
type: Gene
SIO_000068: ncbigene

position:9245645:1
position: 9245645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9320399:1
position: 9320399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9245645-9320399:1:exon

LOC109554772
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109554772
product: integrator complex subunit 6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019955406.1
SIO_010081: LOC109554772
subclass of: SO_0000673
so part of: LOC109554772
location: join(9245645..9246139,9246281..9246358,9270236..9270410,9292998..9293161,9296135..9296287,9299624..9299756,9307777..9307871,9308881..9308991,9311190..9311408,9312641..9312764,9313813..9313955,9315571..9315805,9317435..9317809,9318654..9318747,9319444..9320399)
location: region:9245645-9320399:1
so has part: feature:9245645-9246139:1:exon
so has part: feature:9246281-9246358:1:exon
so has part: feature:9270236-9270410:1:exon
so has part: feature:9292998-9293161:1:exon
so has part: feature:9296135-9296287:1:exon
so has part: feature:9299624-9299756:1:exon
so has part: feature:9307777-9307871:1:exon
so has part: feature:9308881-9308991:1:exon
so has part: feature:9311190-9311408:1:exon
so has part: feature:9312641-9312764:1:exon
so has part: feature:9313813-9313955:1:exon
so has part: feature:9315571-9315805:1:exon
so has part: feature:9317435-9317809:1:exon
so has part: feature:9318654-9318747:1:exon
so has part: feature:9319444-9320399:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9245645-9246139:1:exon

position:9246139:1
position: 9246139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9246281-9246358:1:exon

position:9246281:1
position: 9246281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9246358:1
position: 9246358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9270236-9270410:1:exon

position:9270236:1
position: 9270236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9270410:1
position: 9270410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9292998-9293161:1:exon

position:9292998:1
position: 9292998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9293161:1
position: 9293161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9296135-9296287:1:exon

position:9296135:1
position: 9296135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9296287:1
position: 9296287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9299624-9299756:1:exon

position:9299624:1
position: 9299624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9299756:1
position: 9299756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9307777-9307871:1:exon

position:9307777:1
position: 9307777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9307871:1
position: 9307871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9308881-9308991:1:exon

position:9308881:1
position: 9308881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9308991:1
position: 9308991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9311190-9311408:1:exon

position:9311190:1
position: 9311190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9311408:1
position: 9311408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9312641-9312764:1:exon

position:9312641:1
position: 9312641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9312764:1
position: 9312764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9313813-9313955:1:exon

position:9313813:1
position: 9313813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9313955:1
position: 9313955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9315571-9315805:1:exon

position:9315571:1
position: 9315571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9315805:1
position: 9315805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9317435-9317809:1:exon

position:9317435:1
position: 9317435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9317809:1
position: 9317809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9318654-9318747:1:exon

position:9318654:1
position: 9318654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9318747:1
position: 9318747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9319444-9320399:1:exon

position:9319444:1
position: 9319444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109554772
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109554772
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 6-like
translation: MPILLFLIDTSASMNQRTDLGTSYLDIAKGAVELFLKLRARDPASRGDRYMLVTYDEPPYCIKAGWKENHATFMSELKNLQASGLTTLGQALRSSFDLLNLNRLISGIDNYGQVKNSLSEYNGLMDSSRPSNSFAAQPWHSCHKLIYVRPNSKTGVPVGHWPIPESFWPDQNLPSLPPRTSHPIVRFSCIDCEPMVIDKLPFDKYELEPSPLTQYILERKSPHTCWQVFVTSSGKYNELGYPFGYLKASTTLTCVNLFVMPYNYPVLLPLLDDLFKVHKLKPNLKWRQAFDSYLKTLPPYYLLPLKKALRMMGAPNLISXNLDCGLSYSVISYLKKLSQQTKLESERILASVGKKPPQEIGIKVKNHSGGGVSLTHNKNFRKLLKEIIGDTAPRLTDSXTKEFAGFQVGLLNKDLKPQTYRNAYDIPRRDLLDQLTRMRSNLLKTHKFIVGQDEDSLHSVPVAQMGNYQEYLKTLASPLREIDPDQPKRLHTFGNPFKQDKKGMMIDEADEFVAGPQKKVKRPGEVNSALSSKRRRSMSLLLRKPQTPPTVTNHVGGKGPPSASWFPSYSNLIKPTLVYTGVTVTHDVHEEKMENGQISPDGFLSKSASPELMNMAGDGIPPDQVDSLSDDFTSLREDGPMHKPGSNALPGETKNCSVSVDDQKVSVTSALETVPSTLQITPAMAQGINADIKHQLMKEVRKFGRKYERIFTLLEGVQGPLAVKKQFVEFTIKEAARFKRRVLIQYLEKVLEKIESYHLLNNVNHINSRS
SIO_010081: LOC109554772
subclass of: SO_0000673
so part of: LOC109554772
location: join(9246029..9246139,9246281..9246358,9270236..9270410,9292998..9293161,9296135..9296287,9299624..9299756,9307777..9307871,9308881..9308991,9311190..9311408,9312641..9312764,9313813..9313955,9315571..9315805,9317435..9317809,9318654..9318747,9319444..9319546)
location: region:9246029-9319546:1
so has part: feature:9246029-9246139:1:exon
so has part: feature:9246281-9246358:1:exon
so has part: feature:9270236-9270410:1:exon
so has part: feature:9292998-9293161:1:exon
so has part: feature:9296135-9296287:1:exon
so has part: feature:9299624-9299756:1:exon
so has part: feature:9307777-9307871:1:exon
so has part: feature:9308881-9308991:1:exon
so has part: feature:9311190-9311408:1:exon
so has part: feature:9312641-9312764:1:exon
so has part: feature:9313813-9313955:1:exon
so has part: feature:9315571-9315805:1:exon
so has part: feature:9317435-9317809:1:exon
so has part: feature:9318654-9318747:1:exon
so has part: feature:9319444-9319546:1:exon

XP_019810965.1
type: Protein
SIO_000068: ncbiprotein

position:9246029:1
position: 9246029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9319546:1
position: 9319546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9246029-9246139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9246281-9246358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9270236-9270410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9292998-9293161:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9296135-9296287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9299624-9299756:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9307777-9307871:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9308881-9308991:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9311190-9311408:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9312641-9312764:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9313813-9313955:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9315571-9315805:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9317435-9317809:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9318654-9318747:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9319444-9319546:1:exon

MMGT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: MMGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9416337..9428604)
location: region:9416337-9428604:-1
so has part: feature:9416337-9428604:-1:exon
subclass of: SO_0000010

109555304
type: Gene
SIO_000068: ncbigene

position:9416337:-1
position: 9416337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9428604:-1
position: 9428604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9416337-9428604:-1:exon

MMGT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MMGT1
product: membrane magnesium transporter 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019956079.1
SIO_010081: MMGT1
subclass of: SO_0000673
so part of: MMGT1
location: complement(join(9416337..9419745,9421344..9421447,9424162..9424214,9426927..9427028,9428250..9428604))
location: region:9416337-9428604:-1
so has part: feature:9428250-9428604:-1:exon
so has part: feature:9426927-9427028:-1:exon
so has part: feature:9424162-9424214:-1:exon
so has part: feature:9421344-9421447:-1:exon
so has part: feature:9416337-9419745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9428250-9428604:-1:exon

position:9428250:-1
position: 9428250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9426927-9427028:-1:exon

position:9426927:-1
position: 9426927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9427028:-1
position: 9427028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9424162-9424214:-1:exon

position:9424162:-1
position: 9424162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9424214:-1
position: 9424214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9421344-9421447:-1:exon

position:9421344:-1
position: 9421344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9421447:-1
position: 9421447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9416337-9419745:-1:exon

position:9419745:-1
position: 9419745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MMGT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MMGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane magnesium transporter 1
translation: MAPSLWKGLVGIGLFALAHAAXXXAQHYFPSSGIKWKRKCEFLQSSSFQDKIFRSMYYVYDRSYMRLTEKEDESLPIDIVLQTLLAFAVTCYGIVHIAGEFKDMDATSELKNKTFDTLRNHPSFYVFNHRGRVLFRPSDTTNSSNQDALSSNTSLKLRKLESLRR
SIO_010081: MMGT1
subclass of: SO_0000673
so part of: MMGT1
location: complement(join(9419586..9419745,9421344..9421447,9424162..9424214,9426927..9427028,9428250..9428328))
location: region:9419586-9428328:-1
so has part: feature:9428250-9428328:-1:exon
so has part: feature:9426927-9427028:-1:exon
so has part: feature:9424162-9424214:-1:exon
so has part: feature:9421344-9421447:-1:exon
so has part: feature:9419586-9419745:-1:exon

XP_019811638.1
type: Protein
SIO_000068: ncbiprotein

position:9419586:-1
position: 9419586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9428328:-1
position: 9428328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9428250-9428328:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9426927-9427028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9424162-9424214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9421344-9421447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9419586-9419745:-1:exon

SLC9A6
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: SLC9A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9451891..9502500
location: region:9451891-9502500:1
so has part: feature:9451891-9502500:1:exon
subclass of: SO_0000010

109555274
type: Gene
SIO_000068: ncbigene

position:9451891:1
position: 9451891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9502500:1
position: 9502500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9451891-9502500:1:exon

SLC9A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SLC9A6
product: solute carrier family 9 member A6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 36 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 187 samples with support for all annotated introns
transcript id: XM_019956010.1
SIO_010081: SLC9A6
subclass of: SO_0000673
so part of: SLC9A6
location: join(9451891..9452125,9460398..9460597,9462187..9462264,9462537..9462613,9462918..9463030,9465298..9465403,9471718..9471859,9473797..9473902,9474198..9474286,9476581..9476694,9479150..9479261,9480470..9480623,9486422..9486452,9488682..9488761,9494302..9494407,9499680..9502500)
location: region:9451891-9502500:1
so has part: feature:9451891-9452125:1:exon
so has part: feature:9460398-9460597:1:exon
so has part: feature:9462187-9462264:1:exon
so has part: feature:9462537-9462613:1:exon
so has part: feature:9462918-9463030:1:exon
so has part: feature:9465298-9465403:1:exon
so has part: feature:9471718-9471859:1:exon
so has part: feature:9473797-9473902:1:exon
so has part: feature:9474198-9474286:1:exon
so has part: feature:9476581-9476694:1:exon
so has part: feature:9479150-9479261:1:exon
so has part: feature:9480470-9480623:1:exon
so has part: feature:9486422-9486452:1:exon
so has part: feature:9488682-9488761:1:exon
so has part: feature:9494302-9494407:1:exon
so has part: feature:9499680-9502500:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9451891-9452125:1:exon

position:9452125:1
position: 9452125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9460398-9460597:1:exon

position:9460398:1
position: 9460398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9460597:1
position: 9460597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9462187-9462264:1:exon

position:9462187:1
position: 9462187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9462264:1
position: 9462264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9462537-9462613:1:exon

position:9462537:1
position: 9462537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9462613:1
position: 9462613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9462918-9463030:1:exon

position:9462918:1
position: 9462918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9463030:1
position: 9463030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9465298-9465403:1:exon

position:9465298:1
position: 9465298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9465403:1
position: 9465403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9471718-9471859:1:exon

position:9471718:1
position: 9471718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9471859:1
position: 9471859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9473797-9473902:1:exon

position:9473797:1
position: 9473797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9473902:1
position: 9473902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9474198-9474286:1:exon

position:9474198:1
position: 9474198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9474286:1
position: 9474286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9476581-9476694:1:exon

position:9476581:1
position: 9476581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9476694:1
position: 9476694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9479150-9479261:1:exon

position:9479150:1
position: 9479150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9479261:1
position: 9479261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9480470-9480623:1:exon

position:9480470:1
position: 9480470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9480623:1
position: 9480623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9486422-9486452:1:exon

position:9486422:1
position: 9486422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9486452:1
position: 9486452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9488682-9488761:1:exon

position:9488682:1
position: 9488682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9488761:1
position: 9488761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9494302-9494407:1:exon

position:9494302:1
position: 9494302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9494407:1
position: 9494407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9499680-9502500:1:exon

position:9499680:1
position: 9499680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC9A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SLC9A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 6
translation: MDEEIVSEKQAEESHRQDSANLLIFILLLTLTILTIWLFKHRRARFLHETGLAMIYGLLVGLVLRYGIHVPSDVNNVTLSCEVQSSPTTLLVNVSGKFYEYTLKGEISSHELNNVQDNEMLRKVTFDPEVFFNILLPPIIFYAGYSLKRRHFFRNLGSILAYAFLGTAISCFVIGSIMYGCVTLMKVTGQLAGDFYFTDCLLFGAIVSATDPVTVLAIFHELQVDVELYALLFGESVLNDAVAIVLSSSIVAYQPAGDNSHTFDVTAMFKSIGIFLGIFSGSFAMGAATGVVTALVTKFTKLREFQLLETGLFFLMSWSTFLLAEAWGFTGVVAVLFCGITQAHYTYNNLSTESQHRTKQLFELLNFLAENFIFSYMGLTLFTFQNHVFNPTFVVGAFIAIFLGRAANIYPLSLLLNLGRRSKIGSNFQHMMMFAGLRGAMAFALAIRDTATYARQMMFSTTLLIVFFTVWVFGGGTTAMLSCLHIRVGVDSDQEHLGIPESERRTTKAESAWLFRMWYNFDHNYLKPLLTHSGPPLTTTLPACCGPIARCLTSPQAYENQEQLKDDDSDLILNDGDISLTYGDSTVNTESASSGAPRRLMGNSSEDAFDRELAFGDHELVIRGTRLVLPMDDSEPPLNLLDNTRHGPA
SIO_010081: SLC9A6
subclass of: SO_0000673
so part of: SLC9A6
location: join(9451957..9452125,9460398..9460597,9462187..9462264,9462537..9462613,9462918..9463030,9465298..9465403,9471718..9471859,9473797..9473902,9474198..9474286,9476581..9476694,9479150..9479261,9480470..9480623,9486422..9486452,9488682..9488761,9494302..9494407,9499680..9499952)
location: region:9451957-9499952:1
so has part: feature:9451957-9452125:1:exon
so has part: feature:9460398-9460597:1:exon
so has part: feature:9462187-9462264:1:exon
so has part: feature:9462537-9462613:1:exon
so has part: feature:9462918-9463030:1:exon
so has part: feature:9465298-9465403:1:exon
so has part: feature:9471718-9471859:1:exon
so has part: feature:9473797-9473902:1:exon
so has part: feature:9474198-9474286:1:exon
so has part: feature:9476581-9476694:1:exon
so has part: feature:9479150-9479261:1:exon
so has part: feature:9480470-9480623:1:exon
so has part: feature:9486422-9486452:1:exon
so has part: feature:9488682-9488761:1:exon
so has part: feature:9494302-9494407:1:exon
so has part: feature:9499680-9499952:1:exon

XP_019811569.1
type: Protein
SIO_000068: ncbiprotein

position:9451957:1
position: 9451957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9499952:1
position: 9499952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9451957-9452125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9460398-9460597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9462187-9462264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9462537-9462613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9462918-9463030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9465298-9465403:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9471718-9471859:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9473797-9473902:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9474198-9474286:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9476581-9476694:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9479150-9479261:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9480470-9480623:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9486422-9486452:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9488682-9488761:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9494302-9494407:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9499680-9499952:1:exon

FHL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: FHL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9623729..9669283
location: region:9623729-9669283:1
so has part: feature:9623729-9669283:1:exon
subclass of: SO_0000010

109555079
type: Gene
SIO_000068: ncbigene

position:9623729:1
position: 9623729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9669283:1
position: 9669283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9623729-9669283:1:exon

FHL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FHL1
product: four and a half LIM domains 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 355 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 164 samples with support for all annotated introns
transcript id: XM_019955636.1
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(9623729..9623819,9625453..9625526,9664748..9664929,9665085..9665259,9665851..9666020,9666443..9666629,9667751..9669283)
location: region:9623729-9669283:1
so has part: feature:9623729-9623819:1:exon
so has part: feature:9625453-9625526:1:exon
so has part: feature:9664748-9664929:1:exon
so has part: feature:9665085-9665259:1:exon
so has part: feature:9665851-9666020:1:exon
so has part: feature:9666443-9666629:1:exon
so has part: feature:9667751-9669283:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9623729-9623819:1:exon

position:9623819:1
position: 9623819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9625453-9625526:1:exon

position:9625453:1
position: 9625453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9625526:1
position: 9625526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9664748-9664929:1:exon

position:9664748:1
position: 9664748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9664929:1
position: 9664929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9665085-9665259:1:exon

position:9665085:1
position: 9665085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9665259:1
position: 9665259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9665851-9666020:1:exon

position:9665851:1
position: 9665851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9666020:1
position: 9666020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9666443-9666629:1:exon

position:9666443:1
position: 9666443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9666629:1
position: 9666629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9667751-9669283:1:exon

position:9667751:1
position: 9667751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FHL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FHL1
product: four and a half LIM domains 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 282 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 191 samples with support for all annotated introns
transcript id: XM_019955634.1
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(9625471..9625526,9664748..9664929,9665085..9665259,9665851..9666020,9666443..9666629,9667197..9667396,9667751..9669283)
location: region:9625471-9669283:1
so has part: feature:9625471-9625526:1:exon
so has part: feature:9664748-9664929:1:exon
so has part: feature:9665085-9665259:1:exon
so has part: feature:9665851-9666020:1:exon
so has part: feature:9666443-9666629:1:exon
so has part: feature:9667197-9667396:1:exon
so has part: feature:9667751-9669283:1:exon

position:9625471:1
position: 9625471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9625471-9625526:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9664748-9664929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9665085-9665259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9665851-9666020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9666443-9666629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9667197-9667396:1:exon

position:9667197:1
position: 9667197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9667396:1
position: 9667396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9667751-9669283:1:exon

FHL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FHL1
product: four and a half LIM domains 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 385 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 184 samples with support for all annotated introns
transcript id: XM_019955633.1
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(9657522..9657633,9664748..9664929,9665085..9665259,9665851..9666020,9666443..9666629,9667197..9667396,9667751..9669283)
location: region:9657522-9669283:1
so has part: feature:9657522-9657633:1:exon
so has part: feature:9664748-9664929:1:exon
so has part: feature:9665085-9665259:1:exon
so has part: feature:9665851-9666020:1:exon
so has part: feature:9666443-9666629:1:exon
so has part: feature:9667197-9667396:1:exon
so has part: feature:9667751-9669283:1:exon

position:9657522:1
position: 9657522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9657522-9657633:1:exon

position:9657633:1
position: 9657633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9664748-9664929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9665085-9665259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9665851-9666020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9666443-9666629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9667197-9667396:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9667751-9669283:1:exon

FHL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FHL1
product: four and a half LIM domains 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 499 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 230 samples with support for all annotated introns
transcript id: XM_019955635.1
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(9657522..9657633,9664748..9664929,9665085..9665259,9665851..9666020,9666443..9666629,9667751..9669283)
location: region:9657522-9669283:1
so has part: feature:9657522-9657633:1:exon
so has part: feature:9664748-9664929:1:exon
so has part: feature:9665085-9665259:1:exon
so has part: feature:9665851-9666020:1:exon
so has part: feature:9666443-9666629:1:exon
so has part: feature:9667751-9669283:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9657522-9657633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9664748-9664929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9665085-9665259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9665851-9666020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9666443-9666629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9667751-9669283:1:exon

FHL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FHL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 1 isoform X3
translation: MASHRHSGPSSYKVGTMAEKFDCHYCRDNLQGKKYVQKDGHHCCLKCFDKFCANTCVQCRKPIGADSKEVHYKNXYWHDTCFRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKKL
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(9657612..9657633,9664748..9664929,9665085..9665259,9665851..9666020,9666443..9666629,9667751..9667905)
location: region:9657612-9667905:1
so has part: feature:9657612-9657633:1:exon
so has part: feature:9664748-9664929:1:exon
so has part: feature:9665085-9665259:1:exon
so has part: feature:9665851-9666020:1:exon
so has part: feature:9666443-9666629:1:exon
so has part: feature:9667751-9667905:1:exon

XP_019811194.1
type: Protein
SIO_000068: ncbiprotein

position:9657612:1
position: 9657612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9667905:1
position: 9667905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9657612-9657633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9664748-9664929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9665085-9665259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9665851-9666020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9666443-9666629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9667751-9667905:1:exon

FHL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FHL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 1 isoform X1
translation: MASHRHSGPSSYKVGTMAEKFDCHYCRDNLQGKKYVQKDGHHCCLKCFDKFCANTCVQCRKPIGADSKEVHYKNXYWHDTCFRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGKRTVSRVSHPVSKARKPPVCHGKRLPLTLFPSANLRGRHPGGERTCPSWVVVLYRKNRSLAAPRGPGLVKAPVWWPMKDNPGTTTASTAKNAP
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(9657612..9657633,9664748..9664929,9665085..9665259,9665851..9666020,9666443..9666629,9667197..9667396,9667751..9667834)
location: region:9657612-9667834:1
so has part: feature:9657612-9657633:1:exon
so has part: feature:9664748-9664929:1:exon
so has part: feature:9665085-9665259:1:exon
so has part: feature:9665851-9666020:1:exon
so has part: feature:9666443-9666629:1:exon
so has part: feature:9667197-9667396:1:exon
so has part: feature:9667751-9667834:1:exon

XP_019811192.1
type: Protein
SIO_000068: ncbiprotein

position:9667834:1
position: 9667834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9657612-9657633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9664748-9664929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9665085-9665259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9665851-9666020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9666443-9666629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9667197-9667396:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9667751-9667834:1:exon

FHL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FHL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 1 isoform X4
translation: MAEKFDCHYCRDNLQGKKYVQKDGHHCCLKCFDKFCANTCVQCRKPIGADSKEVHYKNXYWHDTCFRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKKL
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(9664774..9664929,9665085..9665259,9665851..9666020,9666443..9666629,9667751..9667905)
location: region:9664774-9667905:1
so has part: feature:9664774-9664929:1:exon
so has part: feature:9665085-9665259:1:exon
so has part: feature:9665851-9666020:1:exon
so has part: feature:9666443-9666629:1:exon
so has part: feature:9667751-9667905:1:exon

XP_019811195.1
type: Protein
SIO_000068: ncbiprotein

position:9664774:1
position: 9664774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9664774-9664929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9665085-9665259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9665851-9666020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9666443-9666629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9667751-9667905:1:exon

FHL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FHL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 1 isoform X2
translation: MAEKFDCHYCRDNLQGKKYVQKDGHHCCLKCFDKFCANTCVQCRKPIGADSKEVHYKNXYWHDTCFRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGKRTVSRVSHPVSKARKPPVCHGKRLPLTLFPSANLRGRHPGGERTCPSWVVVLYRKNRSLAAPRGPGLVKAPVWWPMKDNPGTTTASTAKNAP
SIO_010081: FHL1
subclass of: SO_0000673
so part of: FHL1
location: join(9664774..9664929,9665085..9665259,9665851..9666020,9666443..9666629,9667197..9667396,9667751..9667834)
location: region:9664774-9667834:1
so has part: feature:9664774-9664929:1:exon
so has part: feature:9665085-9665259:1:exon
so has part: feature:9665851-9666020:1:exon
so has part: feature:9666443-9666629:1:exon
so has part: feature:9667197-9667396:1:exon
so has part: feature:9667751-9667834:1:exon

XP_019811193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9664774-9664929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9665085-9665259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9665851-9666020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9666443-9666629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9667197-9667396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9667751-9667834:1:exon

MAP7D3
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: MAP7D3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9673050..9708592)
location: region:9673050-9708592:-1
so has part: feature:9673050-9708592:-1:exon
subclass of: SO_0000010

109555080
type: Gene
SIO_000068: ncbigene

position:9673050:-1
position: 9673050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9708592:-1
position: 9708592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9673050-9708592:-1:exon

MAP7D3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MAP7D3
product: MAP7 domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_019955639.1
SIO_010081: MAP7D3
subclass of: SO_0000673
so part of: MAP7D3
location: complement(join(9673050..9674669,9675379..9675650,9676780..9676969,9678011..9678113,9679613..9679666,9680683..9680787,9681697..9681832,9683584..9683713,9685874..9686082,9686346..9686476,9687021..9687965,9688080..9688195,9693439..9693534,9697625..9697723,9698270..9698381,9701285..9701448,9702834..9702917,9703011..9703109,9708499..9708592))
location: region:9673050-9708592:-1
so has part: feature:9708499-9708592:-1:exon
so has part: feature:9703011-9703109:-1:exon
so has part: feature:9702834-9702917:-1:exon
so has part: feature:9701285-9701448:-1:exon
so has part: feature:9698270-9698381:-1:exon
so has part: feature:9697625-9697723:-1:exon
so has part: feature:9693439-9693534:-1:exon
so has part: feature:9688080-9688195:-1:exon
so has part: feature:9687021-9687965:-1:exon
so has part: feature:9686346-9686476:-1:exon
so has part: feature:9685874-9686082:-1:exon
so has part: feature:9683584-9683713:-1:exon
so has part: feature:9681697-9681832:-1:exon
so has part: feature:9680683-9680787:-1:exon
so has part: feature:9679613-9679666:-1:exon
so has part: feature:9678011-9678113:-1:exon
so has part: feature:9676780-9676969:-1:exon
so has part: feature:9675379-9675650:-1:exon
so has part: feature:9673050-9674669:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9708499-9708592:-1:exon

position:9708499:-1
position: 9708499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9703011-9703109:-1:exon

position:9703011:-1
position: 9703011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9703109:-1
position: 9703109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9702834-9702917:-1:exon

position:9702834:-1
position: 9702834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9702917:-1
position: 9702917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9701285-9701448:-1:exon

position:9701285:-1
position: 9701285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9701448:-1
position: 9701448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9698270-9698381:-1:exon

position:9698270:-1
position: 9698270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9698381:-1
position: 9698381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9697625-9697723:-1:exon

position:9697625:-1
position: 9697625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9697723:-1
position: 9697723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9693439-9693534:-1:exon

position:9693439:-1
position: 9693439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9693534:-1
position: 9693534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9688080-9688195:-1:exon

position:9688080:-1
position: 9688080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9688195:-1
position: 9688195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9687021-9687965:-1:exon

position:9687021:-1
position: 9687021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9687965:-1
position: 9687965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9686346-9686476:-1:exon

position:9686346:-1
position: 9686346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9686476:-1
position: 9686476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9685874-9686082:-1:exon

position:9685874:-1
position: 9685874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9686082:-1
position: 9686082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9683584-9683713:-1:exon

position:9683584:-1
position: 9683584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9683713:-1
position: 9683713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9681697-9681832:-1:exon

position:9681697:-1
position: 9681697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9681832:-1
position: 9681832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9680683-9680787:-1:exon

position:9680683:-1
position: 9680683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9680787:-1
position: 9680787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9679613-9679666:-1:exon

position:9679613:-1
position: 9679613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9679666:-1
position: 9679666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9678011-9678113:-1:exon

position:9678011:-1
position: 9678011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9678113:-1
position: 9678113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9676780-9676969:-1:exon

position:9676780:-1
position: 9676780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9676969:-1
position: 9676969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9675379-9675650:-1:exon

position:9675379:-1
position: 9675379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9675650:-1
position: 9675650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9673050-9674669:-1:exon

position:9674669:-1
position: 9674669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAP7D3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MAP7D3
product: MAP7 domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_019955638.1
SIO_010081: MAP7D3
subclass of: SO_0000673
so part of: MAP7D3
location: complement(join(9673050..9674669,9675379..9675650,9676780..9676969,9678011..9678113,9679613..9679666,9680683..9680787,9681697..9681832,9683584..9683713,9685874..9686079,9686346..9686476,9687021..9688195,9693439..9693534,9697625..9697723,9698270..9698381,9701285..9701448,9702834..9702917,9703011..9703109,9708499..9708592))
location: region:9673050-9708592:-1
so has part: feature:9708499-9708592:-1:exon
so has part: feature:9703011-9703109:-1:exon
so has part: feature:9702834-9702917:-1:exon
so has part: feature:9701285-9701448:-1:exon
so has part: feature:9698270-9698381:-1:exon
so has part: feature:9697625-9697723:-1:exon
so has part: feature:9693439-9693534:-1:exon
so has part: feature:9687021-9688195:-1:exon
so has part: feature:9686346-9686476:-1:exon
so has part: feature:9685874-9686079:-1:exon
so has part: feature:9683584-9683713:-1:exon
so has part: feature:9681697-9681832:-1:exon
so has part: feature:9680683-9680787:-1:exon
so has part: feature:9679613-9679666:-1:exon
so has part: feature:9678011-9678113:-1:exon
so has part: feature:9676780-9676969:-1:exon
so has part: feature:9675379-9675650:-1:exon
so has part: feature:9673050-9674669:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9708499-9708592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9703011-9703109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9702834-9702917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9701285-9701448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9698270-9698381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9697625-9697723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9693439-9693534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9687021-9688195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9686346-9686476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9685874-9686079:-1:exon

position:9686079:-1
position: 9686079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9683584-9683713:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9681697-9681832:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9680683-9680787:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9679613-9679666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9678011-9678113:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9676780-9676969:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9675379-9675650:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9673050-9674669:-1:exon

MAP7D3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MAP7D3
product: MAP7 domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_019955637.1
SIO_010081: MAP7D3
subclass of: SO_0000673
so part of: MAP7D3
location: complement(join(9673050..9674669,9675379..9675650,9676780..9676969,9678011..9678113,9679613..9679666,9680683..9680787,9681697..9681832,9683584..9683713,9685874..9686082,9686346..9686476,9687021..9688195,9693439..9693534,9697625..9697723,9698270..9698381,9701285..9701448,9702834..9702917,9703011..9703109,9708499..9708592))
location: region:9673050-9708592:-1
so has part: feature:9708499-9708592:-1:exon
so has part: feature:9703011-9703109:-1:exon
so has part: feature:9702834-9702917:-1:exon
so has part: feature:9701285-9701448:-1:exon
so has part: feature:9698270-9698381:-1:exon
so has part: feature:9697625-9697723:-1:exon
so has part: feature:9693439-9693534:-1:exon
so has part: feature:9687021-9688195:-1:exon
so has part: feature:9686346-9686476:-1:exon
so has part: feature:9685874-9686082:-1:exon
so has part: feature:9683584-9683713:-1:exon
so has part: feature:9681697-9681832:-1:exon
so has part: feature:9680683-9680787:-1:exon
so has part: feature:9679613-9679666:-1:exon
so has part: feature:9678011-9678113:-1:exon
so has part: feature:9676780-9676969:-1:exon
so has part: feature:9675379-9675650:-1:exon
so has part: feature:9673050-9674669:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9708499-9708592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9703011-9703109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9702834-9702917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9701285-9701448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9698270-9698381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9697625-9697723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9693439-9693534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9687021-9688195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9686346-9686476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9685874-9686082:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9683584-9683713:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9681697-9681832:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9680683-9680787:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9679613-9679666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9678011-9678113:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9676780-9676969:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9675379-9675650:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9673050-9674669:-1:exon

MAP7D3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MAP7D3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 3 isoform X3
translation: MAERAGGGTSLRGLRERMVAAANAIAEERRSQGSFSSLPSQPSNIKSPFKPVIDGSVLKNDIKQRLAKERREEKKRQDDANKETQLLEKERKSKIVYEKQMEEKQRKLREQKEKDEQRRISAEKKRNEMLEEEREKFKAVLHRTLERSSRVDRQKRWSWAGYTTVNSQNKTVNKHSTSTEKLEQGTCGLHRQMSSTGLQNSVAKKTPEKRRSSSLNRRCSRLHSSTETEQXEEKRPGIHSVIQYVNIPLLRHSSDELKSTIVPRQSTAVMPFQEKVNVEAPPEVSVEAFPEETMKKHPKVSVETFLEASMKEHPGVNVEALAEESMKEHPKVRVDALLEVSMKEHPAVSVEALLEESMKEHPAVSVEALAEESMKEHPKVRVDALLKVSMKEHPEVSVEALVEASMKEHPAVNVEALAEASMKEHPKVSVDSLPEVSTEEHPKVSVEALPEVNMEGPCANVETSPETSEDLSLEAHVGPSPEVSMDSSPDVSVNPSPEVSMDSSQEVSTEASSEASVDISPEASMVTLPEESVETSPEESVEAFSAASMDALPEGSVEVLPKEPTKGPSEASVEAPLETSPEVTVEISSKKSEMDEQPSNPITKKRIPPSQIPCYRWSSSPTRRWRPPSPISASRQIQKNCPPSPSPGTSKQSTQFCFSYKVIPTQRTVFAQNALGTMGMKSKAVSNTINNSEAPSQKDMICEESGNKGTPGPKNAEEATKILAEKRRLAREQKEKEERLQKEMEQRKMKDVAKKVDDGQEDEFSKFGDGQQPKEMKKRESQEQEDQKVELQKSDAKIKAQEEADKRKKEHERIMLQNLQERLERKKRIEEIMKRTRKPDSNASKATETLSSDAYEEDEADDEDESESDSDSFDDVHPSATINGVDSSPKPKTHVKNVKNTSKFLDVTSSHIHKETKAFLNTDMKTFRQKGVKDPLNQTKSTRSSTKRPTNRAAKTGKAETSSTMRPSRSSHSEVQKWVCDRIINFSRETEPPVSSFPPESPKLQLRGSVTSCLSHQPPIDNKNRSKSVPAPSDM
SIO_010081: MAP7D3
subclass of: SO_0000673
so part of: MAP7D3
location: complement(join(9674662..9674669,9675379..9675650,9676780..9676969,9678011..9678113,9679613..9679666,9680683..9680787,9681697..9681832,9683584..9683713,9685874..9686082,9686346..9686476,9687021..9687965,9688080..9688195,9693439..9693534,9697625..9697723,9698270..9698381,9701285..9701448,9702834..9702917,9703011..9703109,9708499..9708553))
location: region:9674662-9708553:-1
so has part: feature:9708499-9708553:-1:exon
so has part: feature:9703011-9703109:-1:exon
so has part: feature:9702834-9702917:-1:exon
so has part: feature:9701285-9701448:-1:exon
so has part: feature:9698270-9698381:-1:exon
so has part: feature:9697625-9697723:-1:exon
so has part: feature:9693439-9693534:-1:exon
so has part: feature:9688080-9688195:-1:exon
so has part: feature:9687021-9687965:-1:exon
so has part: feature:9686346-9686476:-1:exon
so has part: feature:9685874-9686082:-1:exon
so has part: feature:9683584-9683713:-1:exon
so has part: feature:9681697-9681832:-1:exon
so has part: feature:9680683-9680787:-1:exon
so has part: feature:9679613-9679666:-1:exon
so has part: feature:9678011-9678113:-1:exon
so has part: feature:9676780-9676969:-1:exon
so has part: feature:9675379-9675650:-1:exon
so has part: feature:9674662-9674669:-1:exon

XP_019811198.1
type: Protein
SIO_000068: ncbiprotein

position:9674662:-1
position: 9674662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9708553:-1
position: 9708553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9708499-9708553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9703011-9703109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9702834-9702917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9701285-9701448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9698270-9698381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9697625-9697723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9693439-9693534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9688080-9688195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9687021-9687965:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9686346-9686476:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9685874-9686082:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9683584-9683713:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9681697-9681832:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9680683-9680787:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9679613-9679666:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9678011-9678113:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9676780-9676969:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9675379-9675650:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9674662-9674669:-1:exon

MAP7D3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MAP7D3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 3 isoform X2
translation: MAERAGGGTSLRGLRERMVAAANAIAEERRSQGSFSSLPSQPSNIKSPFKPVIDGSVLKNDIKQRLAKERREEKKRQDDANKETQLLEKERKSKIVYEKQMEEKQRKLREQKEKDEQRRISAEKKRNEMLEEEREKFKAVLHRTLERSSRVDRQKRWSWAGYTTVNSQNKTVNKHSTSTEKLEQGTCGLHRQMSSTGLQNSVAKKTPEKRRSSSLNRRCSRLHSSTETEQXEEKRPGIHSVIQYVNIPLLRHSSDELKSTIVPRQSTAVMPFQEKIEIPSKTSVGVAPKASVEVPPEVSVEALTKASLDESPQVNVEAPPEVSVEAFPEETMKKHPKVSVETFLEASMKEHPGVNVEALAEESMKEHPKVRVDALLEVSMKEHPAVSVEALLEESMKEHPAVSVEALAEESMKEHPKVRVDALLKVSMKEHPEVSVEALVEASMKEHPAVNVEALAEASMKEHPKVSVDSLPEVSTEEHPKVSVEALPEVNMEGPCANVETSPETSEDLSLEAHVGPSPEVSMDSSPDVSVNPSPEVSMDSSQEVSTEASSEASVDISPEASMVTLPEESVETSPEESVEAFSAASMDALPEGSVEVLPKEPTKGPSEASVEAPLETSPEVTVEISSKKSEMDEQPSNPITKKRIPPSQIPCYRWSSSPTRRWRPPSPISARQIQKNCPPSPSPGTSKQSTQFCFSYKVIPTQRTVFAQNALGTMGMKSKAVSNTINNSEAPSQKDMICEESGNKGTPGPKNAEEATKILAEKRRLAREQKEKEERLQKEMEQRKMKDVAKKVDDGQEDEFSKFGDGQQPKEMKKRESQEQEDQKVELQKSDAKIKAQEEADKRKKEHERIMLQNLQERLERKKRIEEIMKRTRKPDSNASKATETLSSDAYEEDEADDEDESESDSDSFDDVHPSATINGVDSSPKPKTHVKNVKNTSKFLDVTSSHIHKETKAFLNTDMKTFRQKGVKDPLNQTKSTRSSTKRPTNRAAKTGKAETSSTMRPSRSSHSEVQKWVCDRIINFSRETEPPVSSFPPESPKLQLRGSVTSCLSHQPPIDNKNRSKSVPAPSDM
SIO_010081: MAP7D3
subclass of: SO_0000673
so part of: MAP7D3
location: complement(join(9674662..9674669,9675379..9675650,9676780..9676969,9678011..9678113,9679613..9679666,9680683..9680787,9681697..9681832,9683584..9683713,9685874..9686079,9686346..9686476,9687021..9688195,9693439..9693534,9697625..9697723,9698270..9698381,9701285..9701448,9702834..9702917,9703011..9703109,9708499..9708553))
location: region:9674662-9708553:-1
so has part: feature:9708499-9708553:-1:exon
so has part: feature:9703011-9703109:-1:exon
so has part: feature:9702834-9702917:-1:exon
so has part: feature:9701285-9701448:-1:exon
so has part: feature:9698270-9698381:-1:exon
so has part: feature:9697625-9697723:-1:exon
so has part: feature:9693439-9693534:-1:exon
so has part: feature:9687021-9688195:-1:exon
so has part: feature:9686346-9686476:-1:exon
so has part: feature:9685874-9686079:-1:exon
so has part: feature:9683584-9683713:-1:exon
so has part: feature:9681697-9681832:-1:exon
so has part: feature:9680683-9680787:-1:exon
so has part: feature:9679613-9679666:-1:exon
so has part: feature:9678011-9678113:-1:exon
so has part: feature:9676780-9676969:-1:exon
so has part: feature:9675379-9675650:-1:exon
so has part: feature:9674662-9674669:-1:exon

XP_019811197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9708499-9708553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9703011-9703109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9702834-9702917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9701285-9701448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9698270-9698381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9697625-9697723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9693439-9693534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9687021-9688195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9686346-9686476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9685874-9686079:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9683584-9683713:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9681697-9681832:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9680683-9680787:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9679613-9679666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9678011-9678113:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9676780-9676969:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9675379-9675650:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9674662-9674669:-1:exon

MAP7D3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MAP7D3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 3 isoform X1
translation: MAERAGGGTSLRGLRERMVAAANAIAEERRSQGSFSSLPSQPSNIKSPFKPVIDGSVLKNDIKQRLAKERREEKKRQDDANKETQLLEKERKSKIVYEKQMEEKQRKLREQKEKDEQRRISAEKKRNEMLEEEREKFKAVLHRTLERSSRVDRQKRWSWAGYTTVNSQNKTVNKHSTSTEKLEQGTCGLHRQMSSTGLQNSVAKKTPEKRRSSSLNRRCSRLHSSTETEQXEEKRPGIHSVIQYVNIPLLRHSSDELKSTIVPRQSTAVMPFQEKIEIPSKTSVGVAPKASVEVPPEVSVEALTKASLDESPQVNVEAPPEVSVEAFPEETMKKHPKVSVETFLEASMKEHPGVNVEALAEESMKEHPKVRVDALLEVSMKEHPAVSVEALLEESMKEHPAVSVEALAEESMKEHPKVRVDALLKVSMKEHPEVSVEALVEASMKEHPAVNVEALAEASMKEHPKVSVDSLPEVSTEEHPKVSVEALPEVNMEGPCANVETSPETSEDLSLEAHVGPSPEVSMDSSPDVSVNPSPEVSMDSSQEVSTEASSEASVDISPEASMVTLPEESVETSPEESVEAFSAASMDALPEGSVEVLPKEPTKGPSEASVEAPLETSPEVTVEISSKKSEMDEQPSNPITKKRIPPSQIPCYRWSSSPTRRWRPPSPISASRQIQKNCPPSPSPGTSKQSTQFCFSYKVIPTQRTVFAQNALGTMGMKSKAVSNTINNSEAPSQKDMICEESGNKGTPGPKNAEEATKILAEKRRLAREQKEKEERLQKEMEQRKMKDVAKKVDDGQEDEFSKFGDGQQPKEMKKRESQEQEDQKVELQKSDAKIKAQEEADKRKKEHERIMLQNLQERLERKKRIEEIMKRTRKPDSNASKATETLSSDAYEEDEADDEDESESDSDSFDDVHPSATINGVDSSPKPKTHVKNVKNTSKFLDVTSSHIHKETKAFLNTDMKTFRQKGVKDPLNQTKSTRSSTKRPTNRAAKTGKAETSSTMRPSRSSHSEVQKWVCDRIINFSRETEPPVSSFPPESPKLQLRGSVTSCLSHQPPIDNKNRSKSVPAPSDM
SIO_010081: MAP7D3
subclass of: SO_0000673
so part of: MAP7D3
location: complement(join(9674662..9674669,9675379..9675650,9676780..9676969,9678011..9678113,9679613..9679666,9680683..9680787,9681697..9681832,9683584..9683713,9685874..9686082,9686346..9686476,9687021..9688195,9693439..9693534,9697625..9697723,9698270..9698381,9701285..9701448,9702834..9702917,9703011..9703109,9708499..9708553))
location: region:9674662-9708553:-1
so has part: feature:9708499-9708553:-1:exon
so has part: feature:9703011-9703109:-1:exon
so has part: feature:9702834-9702917:-1:exon
so has part: feature:9701285-9701448:-1:exon
so has part: feature:9698270-9698381:-1:exon
so has part: feature:9697625-9697723:-1:exon
so has part: feature:9693439-9693534:-1:exon
so has part: feature:9687021-9688195:-1:exon
so has part: feature:9686346-9686476:-1:exon
so has part: feature:9685874-9686082:-1:exon
so has part: feature:9683584-9683713:-1:exon
so has part: feature:9681697-9681832:-1:exon
so has part: feature:9680683-9680787:-1:exon
so has part: feature:9679613-9679666:-1:exon
so has part: feature:9678011-9678113:-1:exon
so has part: feature:9676780-9676969:-1:exon
so has part: feature:9675379-9675650:-1:exon
so has part: feature:9674662-9674669:-1:exon

XP_019811196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9708499-9708553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9703011-9703109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9702834-9702917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9701285-9701448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9698270-9698381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9697625-9697723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9693439-9693534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9687021-9688195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9686346-9686476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9685874-9686082:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9683584-9683713:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9681697-9681832:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9680683-9680787:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9679613-9679666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9678011-9678113:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9676780-9676969:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9675379-9675650:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9674662-9674669:-1:exon

ADGRG4
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9751555..9896630
location: region:9751555-9896630:1
so has part: feature:9751555-9896630:1:exon
subclass of: SO_0000010

109554773
type: Gene
SIO_000068: ncbigene

position:9751555:1
position: 9751555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9896630:1
position: 9896630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9751555-9896630:1:exon

ADGRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ADGRG4
product: adhesion G protein-coupled receptor G4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 7 bases in 5 codons; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_019955407.1
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(9751555..9751624,9769667..9770283,9776027..9776106,9787638..9791029,9794157..9794771,9795908..9796007,9798273..9798337,9799841..9799898,9801238..9801281,9802976..9803139,9804145..9804277,9806039..9806157,9818395..9818609,9821140..9821302,9832988..9833123,9838821..9838940,9840411..9840456,9842980..9843083,9846167..9846288,9847217..9847482,9855755..9855835,9859169..9859449,9864236..9864334,9865230..9865364,9867725..9867805,9896607..9896630)
location: region:9751555-9896630:1
so has part: feature:9751555-9751624:1:exon
so has part: feature:9769667-9770283:1:exon
so has part: feature:9776027-9776106:1:exon
so has part: feature:9787638-9791029:1:exon
so has part: feature:9794157-9794771:1:exon
so has part: feature:9795908-9796007:1:exon
so has part: feature:9798273-9798337:1:exon
so has part: feature:9799841-9799898:1:exon
so has part: feature:9801238-9801281:1:exon
so has part: feature:9802976-9803139:1:exon
so has part: feature:9804145-9804277:1:exon
so has part: feature:9806039-9806157:1:exon
so has part: feature:9818395-9818609:1:exon
so has part: feature:9821140-9821302:1:exon
so has part: feature:9832988-9833123:1:exon
so has part: feature:9838821-9838940:1:exon
so has part: feature:9840411-9840456:1:exon
so has part: feature:9842980-9843083:1:exon
so has part: feature:9846167-9846288:1:exon
so has part: feature:9847217-9847482:1:exon
so has part: feature:9855755-9855835:1:exon
so has part: feature:9859169-9859449:1:exon
so has part: feature:9864236-9864334:1:exon
so has part: feature:9865230-9865364:1:exon
so has part: feature:9867725-9867805:1:exon
so has part: feature:9896607-9896630:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9751555-9751624:1:exon

position:9751624:1
position: 9751624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9769667-9770283:1:exon

position:9769667:1
position: 9769667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9770283:1
position: 9770283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9776027-9776106:1:exon

position:9776027:1
position: 9776027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9776106:1
position: 9776106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9787638-9791029:1:exon

position:9787638:1
position: 9787638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9791029:1
position: 9791029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9794157-9794771:1:exon

position:9794157:1
position: 9794157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9794771:1
position: 9794771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9795908-9796007:1:exon

position:9795908:1
position: 9795908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9796007:1
position: 9796007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9798273-9798337:1:exon

position:9798273:1
position: 9798273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9798337:1
position: 9798337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9799841-9799898:1:exon

position:9799841:1
position: 9799841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9799898:1
position: 9799898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9801238-9801281:1:exon

position:9801238:1
position: 9801238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9801281:1
position: 9801281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9802976-9803139:1:exon

position:9802976:1
position: 9802976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9803139:1
position: 9803139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9804145-9804277:1:exon

position:9804145:1
position: 9804145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9804277:1
position: 9804277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9806039-9806157:1:exon

position:9806039:1
position: 9806039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9806157:1
position: 9806157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9818395-9818609:1:exon

position:9818395:1
position: 9818395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9818609:1
position: 9818609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9821140-9821302:1:exon

position:9821140:1
position: 9821140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9821302:1
position: 9821302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9832988-9833123:1:exon

position:9832988:1
position: 9832988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9833123:1
position: 9833123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9838821-9838940:1:exon

position:9838821:1
position: 9838821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9838940:1
position: 9838940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9840411-9840456:1:exon

position:9840411:1
position: 9840411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9840456:1
position: 9840456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9842980-9843083:1:exon

position:9842980:1
position: 9842980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9843083:1
position: 9843083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9846167-9846288:1:exon

position:9846167:1
position: 9846167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9846288:1
position: 9846288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9847217-9847482:1:exon

position:9847217:1
position: 9847217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9847482:1
position: 9847482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9855755-9855835:1:exon

position:9855755:1
position: 9855755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9855835:1
position: 9855835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:9859169-9859449:1:exon

position:9859169:1
position: 9859169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9859449:1
position: 9859449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:9864236-9864334:1:exon

position:9864236:1
position: 9864236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9864334:1
position: 9864334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:9865230-9865364:1:exon

position:9865230:1
position: 9865230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9865364:1
position: 9865364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:9867725-9867805:1:exon

position:9867725:1
position: 9867725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9867805:1
position: 9867805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:9896607-9896630:1:exon

position:9896607:1
position: 9896607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADGRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ADGRG4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 7 bases in 5 codons; deleted 5 bases in 4 codons; substituted 14 bases at 14 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:9787920..9787922,aa:OTHER)
transl except: (pos:9788127..9788129,aa:OTHER)
transl except: (pos:9788446..9788448,aa:OTHER)
transl except: (pos:9788461..9788463,aa:OTHER)
transl except: (pos:9788707..9788709,aa:OTHER)
transl except: (pos:9789424..9789426,aa:OTHER)
transl except: (pos:9790541..9790543,aa:OTHER)
transl except: (pos:9790670..9790672,aa:OTHER)
transl except: (pos:9790887..9790889,aa:OTHER)
transl except: (pos:9790950..9790952,aa:OTHER)
transl except: (pos:9847305..9847307,aa:OTHER)
transl except: (pos:9847385..9847387,aa:OTHER)
transl except: (pos:9859305..9859307,aa:OTHER)
transl except: (pos:9859371..9859373,aa:OTHER)
product: LOW QUALITY PROTEIN: adhesion G-protein coupled receptor G4
translation: MKEHIIYQKLYGTILMSSFIFLSDSLSLKGKRLDFYGKADTYQSLTNNIPGLSQFTVGLDLRFVSVKSSDWMAFSYLTNNTFLGREDIELELSGDHQQVIVYNFGKTFHIRYHLIPFQWHTVWLVWNGVKGRLELFLNKKRILVIMDQPQNLEPNGTLVLGHFLKKDNDQVQGLVLRFTSSLYYFQLWDHILGNEEFMKCLRRNVFNWEKDVWLVNKIIPTVDVKLRCSPNGYNNTIWSKVKEQMAIKSTGPYELMTPVLRTAEIESPSTNFQADSSPTVEDAISTFIPKEASSMALSFRTSSPFTKAQGVQIVSDVETTHTALTPGKTLAPTVAETIFSSTITGPVYAXNIPTGGGNMLPLISTRSASTSKESESGPTSTSDEGVHLFFTNEITWTSRPDQTLLTSVFHGSTSNTEHXSTTTNISSNQKHPECKATTIANTTTDRYITVLSKLTSPWLTNFSMVSGVTSVTXLPESKFSTLLLKTTPAFTVLGNELLXTPRETVVLLVDRISTLADVEPIFFYXGECFXEHTETNGTIAFGETTAPHPLLPDSAMIQRFIATVTRKETTSHYLEGKSPLAVMIKVSPFATMLEATDESISPFPDAEKLTTXLENTTTAEVRKSWFSTKSMKTTPKSSYNETTDIFNSTHIYIAPWTSETPPEGNPAPSPTSGSTKTPSTSTTSNTEEVHVSEMSTGLGKTALPSRALTITTLISPEKGSMSALSVYTPRTEKKIVSTTSVTHPFSHRQDSSFVDTITSGTTSISNPINNKTTFLHLLSPRTQPEVSSVASLISESTQTSPESPSPSTARLSRANFIAVSTDRITTALSASNVSIALLGKTSMITSIHIYXMSSWPVSVTPFTSKSVLGTPTVLMTGFSKTXHSDCLKSTSVATSGPXSEMSSMSVNVSAFPPPTVSSDASTTGGSFHTSLSSVTPRPSMTMQTLSLDVTPLTYAGSASKNAVASIAFTTSEITKVSSSITPTSFSSPAEPTFPSGKTIPTTIMAGTVTPFIGIPVSPLLSSKNTEAISSIPKTTFSSFLSTTQQSSQRYQSTTLSIFPGITNSSLSTVSSGKATALISTHSRTGAPESVLSSTLENLHTSLNIQISPSLTGFKSTPGSTKSVKITTYHSSNTEKKTSSSENTSTAELTKGAMSVNIPVSYPPWIPSGTTSPSSTSILFSPQSTEAKFSTPKTSLPPMSQRVGFPVLQTKTTSSNAQSLLLTSXNTPTAEDSQFSASTTTHVPTSHKKQTESPYVSLESLSTFPVSXTGLVPGDVMAMSSISATGTLPTLRMSESPSLSISSKSIPVTLADIKHTFEKTTTSVTPGTTLPSNISDATSXSIISKAAASPMLTWILTSLPXGSALATRSNTLHIISSSPEEIFSSLQDFKILTFLTSDITPTHPHTHFTIGSFAGVSAVLAETTPTPTMGGITTGFPSLFPVSIKITDDSPYISKSSEAFSRITVTANSRTVPQAPSFSRMSKSPPVDHTPSVGAMFLPSPTTTSAWSRIPAASAPAMLVLPKPTQDSLLNIAATTSAATGALFPLISTGVTHPFTANVSSSPSSSFETTWLDSTPSFLSTKTLTSPIAVKSTVSFYNIEMSLSVFDEEPRIPITSVGKEFAKKWLNSIFQDSAFVLANLAVQIKSRDIPGEELTMDQFVSIFSKQREGQGLSTISHVPYSCLCQGIIKATSFLAPTKLISRIKSKIHGNFMHGNFTQDQLILSVKSGHAAMRKLEPRKCKAEETASKYKGTYKWLLTNPTETAQTRCIKNEDGSATRLCSISIDTGKSHWEKPKFKQCKLLQALPNKIVXLANITISDENVNDVAEHILNLINESPLLDEEETKIIVSKVSDIXQCDEISMNLTQTILQIISAALGKQNHSASDLHGVSNEILRIIEHAGHKMEFPGSAANLTVARLTLAVLWVDHTFEGMAFSIRSYEEGIEPEISLDKVPLGRVLASIYLPKSLRERIPLSSLHTILFNFFGQTSLFKTKNITKALTT…
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(9751555..9751624,9769667..9770283,9776027..9776106,9787638..9791029,9794157..9794771,9795908..9796007,9798273..9798337,9799841..9799898,9801238..9801281,9802976..9803139,9804145..9804277,9806039..9806157,9818395..9818609,9821140..9821302,9832988..9833123,9838821..9838940,9840411..9840456,9842980..9843083,9846167..9846288,9847217..9847482,9855755..9855835,9859169..9859449,9864236..9864334,9865230..9865364,9867725..9867805,9896607..9896630)
location: region:9751555-9896630:1
so has part: feature:9751555-9751624:1:exon
so has part: feature:9769667-9770283:1:exon
so has part: feature:9776027-9776106:1:exon
so has part: feature:9787638-9791029:1:exon
so has part: feature:9794157-9794771:1:exon
so has part: feature:9795908-9796007:1:exon
so has part: feature:9798273-9798337:1:exon
so has part: feature:9799841-9799898:1:exon
so has part: feature:9801238-9801281:1:exon
so has part: feature:9802976-9803139:1:exon
so has part: feature:9804145-9804277:1:exon
so has part: feature:9806039-9806157:1:exon
so has part: feature:9818395-9818609:1:exon
so has part: feature:9821140-9821302:1:exon
so has part: feature:9832988-9833123:1:exon
so has part: feature:9838821-9838940:1:exon
so has part: feature:9840411-9840456:1:exon
so has part: feature:9842980-9843083:1:exon
so has part: feature:9846167-9846288:1:exon
so has part: feature:9847217-9847482:1:exon
so has part: feature:9855755-9855835:1:exon
so has part: feature:9859169-9859449:1:exon
so has part: feature:9864236-9864334:1:exon
so has part: feature:9865230-9865364:1:exon
so has part: feature:9867725-9867805:1:exon
so has part: feature:9896607-9896630:1:exon

XP_019810966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9751555-9751624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9769667-9770283:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9776027-9776106:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9787638-9791029:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9794157-9794771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9795908-9796007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9798273-9798337:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9799841-9799898:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9801238-9801281:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9802976-9803139:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9804145-9804277:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9806039-9806157:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9818395-9818609:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9821140-9821302:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9832988-9833123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9838821-9838940:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9840411-9840456:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9842980-9843083:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9846167-9846288:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9847217-9847482:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9855755-9855835:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9859169-9859449:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9864236-9864334:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9865230-9865364:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9867725-9867805:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9896607-9896630:1:exon

BRS3
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: BRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9930233..9934702
location: region:9930233-9934702:1
so has part: feature:9930233-9934702:1:exon
subclass of: SO_0000010

109555066
type: Gene
SIO_000068: ncbigene

position:9930233:1
position: 9930233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9934702:1
position: 9934702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9930233-9934702:1:exon

BRS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BRS3
product: bombesin receptor subtype 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 7 Proteins
transcript id: XM_019955610.1
SIO_010081: BRS3
subclass of: SO_0000673
so part of: BRS3
location: join(9930233..9930807,9932389..9932740,9934224..9934702)
location: region:9930233-9934702:1
so has part: feature:9930233-9930807:1:exon
so has part: feature:9932389-9932740:1:exon
so has part: feature:9934224-9934702:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9930233-9930807:1:exon

position:9930807:1
position: 9930807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9932389-9932740:1:exon

position:9932389:1
position: 9932389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9932740:1
position: 9932740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9934224-9934702:1:exon

position:9934224:1
position: 9934224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: BRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bombesin receptor subtype-3
translation: MSQRQPQSPNQTLISTTNDTELSSSVVPNDSTNKRRTGDNSPGIEALCAIYITYAVIISVGILGNAILIKVFFKTKSMQTVPNIFITSLAFGDLLLLLTCVPVDATHYLAEGWLFGRIGCKVLSFIRLTSVGVSVFTLTILSADRYKAVVKPLERQPPNAILKTCAKAGCIWIMSMIIALPEAIFSNVYTFQDPDKNVTFKXCASYPVSERLLQEIHSLLCFLVFYIIPLSIISVYYSLIARTLYKSTLNIPTEEQSHARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYRSFTSQNYTDSSTVHLIVTIISRILAFSNSCVNPFALYWLSNTFQQHFKAQLFCCKAGVPDASAANTPLDNLAVMGRVPGAASTQMSEISVSLFTGCSVKKEDDRV
SIO_010081: BRS3
subclass of: SO_0000673
so part of: BRS3
location: join(9930374..9930807,9932389..9932740,9934224..9934637)
location: region:9930374-9934637:1
so has part: feature:9930374-9930807:1:exon
so has part: feature:9932389-9932740:1:exon
so has part: feature:9934224-9934637:1:exon

XP_019811169.1
type: Protein
SIO_000068: ncbiprotein

position:9930374:1
position: 9930374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9934637:1
position: 9934637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9930374-9930807:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9932389-9932740:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9934224-9934637:1:exon

HTATSF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: HTATSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9938947..9956258
location: region:9938947-9956258:1
so has part: feature:9938947-9956258:1:exon
subclass of: SO_0000010

109554774
type: Gene
SIO_000068: ncbigene

position:9938947:1
position: 9938947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9956258:1
position: 9956258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9938947-9956258:1:exon

HTATSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: HTATSF1
product: HIV-1 Tat specific factor 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019955408.1
SIO_010081: HTATSF1
subclass of: SO_0000673
so part of: HTATSF1
location: join(9938947..9939256,9940870..9941050,9941718..9941765,9942246..9942400,9944774..9944937,9946104..9946308,9953321..9953459,9953987..9956258)
location: region:9938947-9956258:1
so has part: feature:9938947-9939256:1:exon
so has part: feature:9940870-9941050:1:exon
so has part: feature:9941718-9941765:1:exon
so has part: feature:9942246-9942400:1:exon
so has part: feature:9944774-9944937:1:exon
so has part: feature:9946104-9946308:1:exon
so has part: feature:9953321-9953459:1:exon
so has part: feature:9953987-9956258:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9938947-9939256:1:exon

position:9939256:1
position: 9939256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9940870-9941050:1:exon

position:9940870:1
position: 9940870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9941050:1
position: 9941050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9941718-9941765:1:exon

position:9941718:1
position: 9941718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9941765:1
position: 9941765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9942246-9942400:1:exon

position:9942246:1
position: 9942246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9942400:1
position: 9942400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9944774-9944937:1:exon

position:9944774:1
position: 9944774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9944937:1
position: 9944937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9946104-9946308:1:exon

position:9946104:1
position: 9946104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9946308:1
position: 9946308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9953321-9953459:1:exon

position:9953321:1
position: 9953321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9953459:1
position: 9953459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9953987-9956258:1:exon

position:9953987:1
position: 9953987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HTATSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: HTATSF1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: HIV Tat-specific factor 1
translation: MSGNNLDANDEFDEQLRMQELYGDTKDDDTEKDPGGETDSFGQQPTDTPYEWDLDKKAWFPKITEDFIATYQANYGFSDDGASSSTASVQDVSARTAEEPPQRQPPEPSDLKKKGEKRKAESGWFHVEEGRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQGNLKGDGLCCYLKRESVDLALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEVGRSILRVRNTDILSFKRTQSLPQCIFLMSYPACSRHPDGVASVSFRDPEEADYCIQTLNGRWFGGRQITAQAWDGTTDYQVEETTREREERLRGWEAFLNAPEANRGLQRSNSIRAPERAGPSRVXHFSEHPGTSQANVQAAATEMAFEEPIDEKKFEKMEDGGEVEEAASEKDAKEXGPEKEAEGPQEESXESCLERESKEGCPKREREEDFPERESGEGSPEKEREEXNPNKESKETVPERESKKKKLKTDPDKNGREKESEEEGPGKESEGEASPQKVASEDDDSEQESEDXSEKQFDDGSEKELEENGLEKGFEEBASDKEFNENIPEKELDENESEKSEFEDDSSEKVFDEEGSEKEFDXESDEKEEEEDAYEKVFDDESDEKEDEEDAEEKELEDADEKDEEDDADEKVFEDSDGKEDEEDGDVKEDEDIDEKVFEDDDSNEKLFDDDSSDKLFEDSDERGTVGGLGNVKEEGPLSTGSSFVLSSDDDDDDTI
SIO_010081: HTATSF1
subclass of: SO_0000673
so part of: HTATSF1
location: join(9939071..9939256,9940870..9941050,9941718..9941765,9942246..9942400,9944774..9944937,9946104..9946308,9953321..9953459,9953987..9955246)
location: region:9939071-9955246:1
so has part: feature:9939071-9939256:1:exon
so has part: feature:9940870-9941050:1:exon
so has part: feature:9941718-9941765:1:exon
so has part: feature:9942246-9942400:1:exon
so has part: feature:9944774-9944937:1:exon
so has part: feature:9946104-9946308:1:exon
so has part: feature:9953321-9953459:1:exon
so has part: feature:9953987-9955246:1:exon

XP_019810967.1
type: Protein
SIO_000068: ncbiprotein

position:9939071:1
position: 9939071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9955246:1
position: 9955246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9939071-9939256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9940870-9941050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9941718-9941765:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9942246-9942400:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9944774-9944937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9946104-9946308:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9953321-9953459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9953987-9955246:1:exon

VGLL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9973915..9996848
location: region:9973915-9996848:1
so has part: feature:9973915-9996848:1:exon
subclass of: SO_0000010

109554996
type: Gene
SIO_000068: ncbigene

position:9973915:1
position: 9973915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9996848:1
position: 9996848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9973915-9996848:1:exon

VGLL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: VGLL1
product: vestigial like family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019955554.1
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(9973915..9974056,9978357..9978575,9989053..9989463,9991262..9991321,9996492..9996848)
location: region:9973915-9996848:1
so has part: feature:9973915-9974056:1:exon
so has part: feature:9978357-9978575:1:exon
so has part: feature:9989053-9989463:1:exon
so has part: feature:9991262-9991321:1:exon
so has part: feature:9996492-9996848:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9973915-9974056:1:exon

position:9974056:1
position: 9974056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9978357-9978575:1:exon

position:9978357:1
position: 9978357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9978575:1
position: 9978575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9989053-9989463:1:exon

position:9989053:1
position: 9989053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9989463:1
position: 9989463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9991262-9991321:1:exon

position:9991262:1
position: 9991262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9991321:1
position: 9991321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9996492-9996848:1:exon

position:9996492:1
position: 9996492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VGLL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 1
translation: MEDVTKTTVHTQSPIKTEWNSRCVLFTYFQGDISSVVDEHFSRALGNVKSPQGQNPSSPSGDVLLRNDSDMPPNQWRFSAPWTKPQPEVSFANGAASCSLNGSGVMPMDQYPLSLTGGPSVQPGELWHFSSLASPSFPEPGYPHAFSTGHLVPEPQPEGKYEPLLSLLQPERCLTHPQESASWEDGNSAGSTGLLFNLPPSSAHFKKIYFPPDGGPAGASFAVERSQSPERRRDLFFY
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(9978374..9978575,9989053..9989463,9991262..9991321,9996492..9996535)
location: region:9978374-9996535:1
so has part: feature:9978374-9978575:1:exon
so has part: feature:9989053-9989463:1:exon
so has part: feature:9991262-9991321:1:exon
so has part: feature:9996492-9996535:1:exon

XP_019811113.1
type: Protein
SIO_000068: ncbiprotein

position:9978374:1
position: 9978374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9996535:1
position: 9996535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9978374-9978575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9989053-9989463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9991262-9991321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9996492-9996535:1:exon

CD40LG
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CD40LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10095132..10107987
location: region:10095132-10107987:1
so has part: feature:10095132-10107987:1:exon
subclass of: SO_0000010

109555532
type: Gene
SIO_000068: ncbigene

position:10095132:1
position: 10095132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10107987:1
position: 10107987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10095132-10107987:1:exon

CD40LG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CD40LG
product: CD40 ligand
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 9 ESTs, 4 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019956469.1
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(10095132..10095578,10097821..10097952,10102111..10102168,10104056..10104118,10106791..10107987)
location: region:10095132-10107987:1
so has part: feature:10095132-10095578:1:exon
so has part: feature:10097821-10097952:1:exon
so has part: feature:10102111-10102168:1:exon
so has part: feature:10104056-10104118:1:exon
so has part: feature:10106791-10107987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10095132-10095578:1:exon

position:10095578:1
position: 10095578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10097821-10097952:1:exon

position:10097821:1
position: 10097821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10097952:1
position: 10097952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10102111-10102168:1:exon

position:10102111:1
position: 10102111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10102168:1
position: 10102168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10104056-10104118:1:exon

position:10104056:1
position: 10104056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10104118:1
position: 10104118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10106791-10107987:1:exon

position:10106791:1
position: 10106791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD40LG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CD40LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD40 ligand
translation: MIETYSQPSPRSVATGPPVSMKIFMYLLTVFLITQMIGSALFAVYLHRRLDKIEDERNLHEDFVFMKTIQRCNKGEGSLSLLNCEEIRSRFEDLVKDIMQNKEVKKKEKNFEMHKGDQEPQIAAHVISEASSKTTSVLQWAPKGYYTLSNNLVTLENGKQLAVKRQGFYYIYTQVTFCSNRETLSQAPFIASLCLKSPSGSERILLRAANTHSSSKPCGQQSIHLGGVFELQSGASVFVNVTDPSQVSHGTGFTSFGLLKL
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(10095423..10095578,10097821..10097952,10102111..10102168,10104056..10104118,10106791..10107167)
location: region:10095423-10107167:1
so has part: feature:10095423-10095578:1:exon
so has part: feature:10097821-10097952:1:exon
so has part: feature:10102111-10102168:1:exon
so has part: feature:10104056-10104118:1:exon
so has part: feature:10106791-10107167:1:exon

XP_019812028.1
type: Protein
SIO_000068: ncbiprotein

position:10095423:1
position: 10095423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10107167:1
position: 10107167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10095423-10095578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10097821-10097952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10102111-10102168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10104056-10104118:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10106791-10107167:1:exon

ARHGEF6
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10118183..10235519)
location: region:10118183-10235519:-1
so has part: feature:10118183-10235519:-1:exon
subclass of: SO_0000010

109555167
type: Gene
SIO_000068: ncbigene

position:10118183:-1
position: 10118183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10235519:-1
position: 10235519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10118183-10235519:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_019955782.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(10118183..10120583,10122237..10122291,10123997..10124096,10126565..10126654,10127761..10127854,10130602..10130727,10132052..10132197,10133174..10133252,10134049..10134135,10137884..10138030,10139976..10140035,10142777..10142915,10168535..10168657,10170476..10170571,10173606..10173700,10188200..10188270,10199910..10200111,10201705..10201829,10204011..10204095,10233854..10233937,10235149..10235509))
location: region:10118183-10235509:-1
so has part: feature:10235149-10235509:-1:exon
so has part: feature:10233854-10233937:-1:exon
so has part: feature:10204011-10204095:-1:exon
so has part: feature:10201705-10201829:-1:exon
so has part: feature:10199910-10200111:-1:exon
so has part: feature:10188200-10188270:-1:exon
so has part: feature:10173606-10173700:-1:exon
so has part: feature:10170476-10170571:-1:exon
so has part: feature:10168535-10168657:-1:exon
so has part: feature:10142777-10142915:-1:exon
so has part: feature:10139976-10140035:-1:exon
so has part: feature:10137884-10138030:-1:exon
so has part: feature:10134049-10134135:-1:exon
so has part: feature:10133174-10133252:-1:exon
so has part: feature:10132052-10132197:-1:exon
so has part: feature:10130602-10130727:-1:exon
so has part: feature:10127761-10127854:-1:exon
so has part: feature:10126565-10126654:-1:exon
so has part: feature:10123997-10124096:-1:exon
so has part: feature:10122237-10122291:-1:exon
so has part: feature:10118183-10120583:-1:exon

position:10235509:-1
position: 10235509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10235149-10235509:-1:exon

position:10235149:-1
position: 10235149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10233854-10233937:-1:exon

position:10233854:-1
position: 10233854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10233937:-1
position: 10233937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10204011-10204095:-1:exon

position:10204011:-1
position: 10204011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10204095:-1
position: 10204095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10201705-10201829:-1:exon

position:10201705:-1
position: 10201705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10201829:-1
position: 10201829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10199910-10200111:-1:exon

position:10199910:-1
position: 10199910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10200111:-1
position: 10200111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10188200-10188270:-1:exon

position:10188200:-1
position: 10188200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10188270:-1
position: 10188270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10173606-10173700:-1:exon

position:10173606:-1
position: 10173606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10173700:-1
position: 10173700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10170476-10170571:-1:exon

position:10170476:-1
position: 10170476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10170571:-1
position: 10170571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10168535-10168657:-1:exon

position:10168535:-1
position: 10168535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10168657:-1
position: 10168657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10142777-10142915:-1:exon

position:10142777:-1
position: 10142777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10142915:-1
position: 10142915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10139976-10140035:-1:exon

position:10139976:-1
position: 10139976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10140035:-1
position: 10140035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10137884-10138030:-1:exon

position:10137884:-1
position: 10137884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10138030:-1
position: 10138030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:10134049-10134135:-1:exon

position:10134049:-1
position: 10134049
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ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 42 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_019955781.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
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location: region:10118183-10235509:-1
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ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_019955784.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(10118183..10120583,10122237..10122291,10123997..10124096,10126565..10126654,10127761..10127854,10132052..10132197,10133174..10133252,10134049..10134135,10137884..10138030,10139976..10140035,10142777..10142915,10168535..10168657,10170476..10170571,10173606..10173700,10188200..10188270,10199910..10200111,10201705..10201829,10204011..10204095,10233854..10233937,10235149..10235507))
location: region:10118183-10235507:-1
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urn:…
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ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_019955783.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(10118183..10120583,10122237..10122291,10123997..10124096,10126565..10126654,10127761..10127854,10128997..10129017,10132052..10132197,10133174..10133252,10134049..10134135,10137884..10138030,10139976..10140035,10142777..10142915,10168535..10168657,10170476..10170571,10173606..10173700,10188200..10188270,10199910..10200111,10201705..10201829,10204011..10204095,10233854..10233937,10235149..10235506))
location: region:10118183-10235506:-1
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urn:…
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urn:…
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ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_019955785.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
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location: region:10118183-10224811:-1
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urn:…
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ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 42 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_019955787.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
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position:10223858:-1
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urn:…
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position:10223421:-1
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urn:…
SIO_000300: 2
SIO_000628: feature:10204011-10204095:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10201705-10201829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10199910-10200111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10188200-10188270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10173606-10173700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10170476-10170571:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10168535-10168657:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10142777-10142915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10139976-10140035:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10137884-10138030:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10134049-10134135:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10133174-10133252:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10132052-10132197:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10130602-10130727:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10128997-10129017:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10127761-10127854:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10126565-10126654:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10123997-10124096:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10122237-10122291:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10118183-10120583:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X4
translation: MQSRMWLSPCSCPREVLGSIQSAVMNPEERVVTWLISLGVLDSPKKTICDPEEFLKSSLKNGVVLCKLINRLRPGSVEKYCLEPQTEADCTNNINDFLKGCAALQVEIFDPDDLYAGVNFSKVLNTLLAVNKATEDQLSERPCGRSSSLSAANSSQTNPQGAVSSTAPGLQRQSKPVEMTENGSHQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIKSSERPLSPKAVKGFEATPLTKNYYTVVLQNILDTEKDYAKELQSLLVTYLRPLQSNNNLSTVEFTSLLGNFEEVCTFQQTLCQALEECSKFPENQHKVGGCLLSLMPHFKSMYLAYCANHPSAVNVLTQHSDELERFMENQGASSPGILILTTSLSKPFMRLEKYVTLLQELERHMEDTHPDHQDILKAIVAFKTLMGQCQDLRKRKQLELQILSEPIQAWEGEDIKTLGNVIFMSQVMVQCGTSEEKEERYLMLFSSVLIMLSASPRMSGFIYQGKIPVAGMVVTRLDEIEGNDSTFEITGNIVERIVVHCGNNQDFQDWLEHLYRLIRGPASCSSLSKTSSSSCSAHSESSKSPKTMKKFLHKRKTERKPSEEEYVIRKSTAALEEDAQILKVIEAYCTSASFPQGHGSSARKDSVPQVLLPEEEKLIVEETRSNGQTIIEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRRDLEKLVRRLLKQTDECIRAESSSKTSVLP
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(10120443..10120583,10122237..10122291,10123997..10124096,10126565..10126654,10127761..10127854,10132052..10132197,10133174..10133252,10134049..10134135,10137884..10138030,10139976..10140035,10142777..10142915,10168535..10168657,10170476..10170571,10173606..10173700,10188200..10188270,10199910..10200111,10201705..10201829,10204011..10204095,10233854..10233937,10235149..10235385))
location: region:10120443-10235385:-1
so has part: feature:10235149-10235385:-1:exon
so has part: feature:10233854-10233937:-1:exon
so has part: feature:10204011-10204095:-1:exon
so has part: feature:10201705-10201829:-1:exon
so has part: feature:10199910-10200111:-1:exon
so has part: feature:10188200-10188270:-1:exon
so has part: feature:10173606-10173700:-1:exon
so has part: feature:10170476-10170571:-1:exon
so has part: feature:10168535-10168657:-1:exon
so has part: feature:10142777-10142915:-1:exon
so has part: feature:10139976-10140035:-1:exon
so has part: feature:10137884-10138030:-1:exon
so has part: feature:10134049-10134135:-1:exon
so has part: feature:10133174-10133252:-1:exon
so has part: feature:10132052-10132197:-1:exon
so has part: feature:10127761-10127854:-1:exon
so has part: feature:10126565-10126654:-1:exon
so has part: feature:10123997-10124096:-1:exon
so has part: feature:10122237-10122291:-1:exon
so has part: feature:10120443-10120583:-1:exon

XP_019811343.1
type: Protein
SIO_000068: ncbiprotein

position:10120443:-1
position: 10120443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10235385:-1
position: 10235385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10235149-10235385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10233854-10233937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10204011-10204095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10201705-10201829:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10199910-10200111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10188200-10188270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10173606-10173700:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10170476-10170571:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10168535-10168657:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10142777-10142915:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10139976-10140035:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10137884-10138030:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10134049-10134135:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10133174-10133252:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10132052-10132197:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10127761-10127854:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10126565-10126654:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10123997-10124096:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10122237-10122291:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10120443-10120583:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X3
translation: MQSRMWLSPCSCPREVLGSIQSAVMNPEERVVTWLISLGVLDSPKKTICDPEEFLKSSLKNGVVLCKLINRLRPGSVEKYCLEPQTEADCTNNINDFLKGCAALQVEIFDPDDLYAGVNFSKVLNTLLAVNKATEDQLSERPCGRSSSLSAANSSQTNPQGAVSSTAPGLQRQSKPVEMTENGSHQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIKSSERPLSPKAVKGFEATPLTKNYYTVVLQNILDTEKDYAKELQSLLVTYLRPLQSNNNLSTVEFTSLLGNFEEVCTFQQTLCQALEECSKFPENQHKVGGCLLSLMPHFKSMYLAYCANHPSAVNVLTQHSDELERFMENQGASSPGILILTTSLSKPFMRLEKYVTLLQELERHMEDTHPDHQDILKAIVAFKTLMGQCQDLRKRKQLELQILSEPIQAWEGEDIKTLGNVIFMSQVMVQCGTSEEKEERYLMLFSSVLIMLSASPRMSGFIYQGKIPVAGMVVTRLDEIEGNDSTFEITGNIVERIVVHCGNNQDFQDWLEHLYRLIRGPASCSSLSKTSSSSCSAHSRMSYILKESSKSPKTMKKFLHKRKTERKPSEEEYVIRKSTAALEEDAQILKVIEAYCTSASFPQGHGSSARKDSVPQVLLPEEEKLIVEETRSNGQTIIEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRRDLEKLVRRLLKQTDECIRAESSSKTSVLP
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(10120443..10120583,10122237..10122291,10123997..10124096,10126565..10126654,10127761..10127854,10128997..10129017,10132052..10132197,10133174..10133252,10134049..10134135,10137884..10138030,10139976..10140035,10142777..10142915,10168535..10168657,10170476..10170571,10173606..10173700,10188200..10188270,10199910..10200111,10201705..10201829,10204011..10204095,10233854..10233937,10235149..10235385))
location: region:10120443-10235385:-1
so has part: feature:10235149-10235385:-1:exon
so has part: feature:10233854-10233937:-1:exon
so has part: feature:10204011-10204095:-1:exon
so has part: feature:10201705-10201829:-1:exon
so has part: feature:10199910-10200111:-1:exon
so has part: feature:10188200-10188270:-1:exon
so has part: feature:10173606-10173700:-1:exon
so has part: feature:10170476-10170571:-1:exon
so has part: feature:10168535-10168657:-1:exon
so has part: feature:10142777-10142915:-1:exon
so has part: feature:10139976-10140035:-1:exon
so has part: feature:10137884-10138030:-1:exon
so has part: feature:10134049-10134135:-1:exon
so has part: feature:10133174-10133252:-1:exon
so has part: feature:10132052-10132197:-1:exon
so has part: feature:10128997-10129017:-1:exon
so has part: feature:10127761-10127854:-1:exon
so has part: feature:10126565-10126654:-1:exon
so has part: feature:10123997-10124096:-1:exon
so has part: feature:10122237-10122291:-1:exon
so has part: feature:10120443-10120583:-1:exon

XP_019811342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10235149-10235385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10233854-10233937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10204011-10204095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10201705-10201829:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10199910-10200111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10188200-10188270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10173606-10173700:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10170476-10170571:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10168535-10168657:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10142777-10142915:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10139976-10140035:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10137884-10138030:-1:exon