Bos indicus isolate QUIL7308 breed Nelore chromosome 26, Bos_indicus_1.0, whole genome shotgun sequence.
type: Entry
definition: Bos indicus isolate QUIL7308 breed Nelore chromosome 26, Bos_indicus_1.0, whole genome shotgun sequence.
sequence version: NC_032675.1
sequence date: 2017-01-12
sequence: sequence
division: CON
label: NC_032675.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA360096
dblink: SAMN02953802
keyword: WGS
keyword: RefSeq
source: Bos indicus (Bos taurus indicus)
organism: Bos indicus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos.
reference: 1
references: 22315242
reference: 2
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003046.1.\nAssembly name: Bos_indicus_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Genoa Biotecnologia SA on\n2014/11/25. The original whole-genome shotgun project has the\naccession AGFL00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Genoa Biotecnologia SA\nAssembly Method :: BWA v. 0.5.9\nAssembly Name :: Bos_indicus_1.0\nReference-guided Assembly :: GCF_000003205.2; Btau_4.0\nGenome Coverage :: 52x\nSequencing Technology :: SOLiD\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Bos indicus Annotation Release 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 51861174
topology: linear
so has quality: SO_0000987
location: 1..51861174
location: region:1-51861174:1
RO_0002162: 9915

NC_032675
type: RefSeq
SIO_000068: refseq

PRJNA360096
type: BioProject
SIO_000068: bioproject

SAMN02953802
type: BioSample
SIO_000068: biosample

1
title: Genome sequence and assembly of Bos indicus
author: Canavez, F.C.
author: Luche, D.D.
author: Stothard, P.
author: Leite, K.R.
author: Sousa-Canavez, J.M.
author: Plastow, G.
author: Meidanis, J.
author: Souza, M.A.
author: Feijao, P.
author: Moore, S.S.
author: Camara-Lopes, L.H.
journal: J. Hered.
volume: 103
issue: 3
pages: 342-348
year: 2012
pubmed: 22315242

22315242
type: PubMed
SIO_000068: pubmed

2
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51861174:1
position: 51861174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-51861174:1:source
so part of: sequence
organism: Bos indicus
mol type: genomic DNA
isolate: QUIL7308
chromosome: 26
sex: male
tissue type: peripheral blood mononuclear cells
country: Brazil
breed: Nelore
note: animal owned by Agropecuaria Quilombo Inc.

9915
type: Taxonomy
SIO_000068: taxonomy

LOC109578950
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578950
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6440..81622)
location: region:6440-81622:-1
so has part: feature:6440-81622:-1:exon

109578950
type: Gene
SIO_000068: ncbigene

position:6440:-1
position: 6440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81622:-1
position: 81622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6440-81622:-1:exon

LOC109578950
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578950
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578950
subclass of: SO_0000673
so part of: LOC109578950
location: complement(6440..6596)
location: region:6440-6596:-1
so has part: feature:6440-6596:-1:exon

position:6596:-1
position: 6596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6440-6596:-1:exon

LOC109578950
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578950
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578950
subclass of: SO_0000673
so part of: LOC109578950
location: complement(76917..77091)
location: region:76917-77091:-1
so has part: feature:76917-77091:-1:exon

position:76917:-1
position: 76917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77091:-1
position: 77091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76917-77091:-1:exon

LOC109578950
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578950
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578950
subclass of: SO_0000673
so part of: LOC109578950
location: complement(81248..81622)
location: region:81248-81622:-1
so has part: feature:81248-81622:-1:exon

position:81248:-1
position: 81248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81248-81622:-1:exon

LOC109579136
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(277732..278672)
location: region:277732-278672:-1
so has part: feature:277732-278672:-1:exon

109579136
type: Gene
SIO_000068: ncbigene

position:277732:-1
position: 277732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278672:-1
position: 278672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277732-278672:-1:exon

LOC109579136
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109579136
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC109579136
subclass of: SO_0000673
so part of: LOC109579136
location: complement(277732..278672)
location: region:277732-278672:-1
so has part: feature:277732-278672:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277732-278672:-1:exon

LOC109579111
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579111
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(300175..301080)
location: region:300175-301080:-1
so has part: feature:300175-301080:-1:exon

109579111
type: Gene
SIO_000068: ncbigene

position:300175:-1
position: 300175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301080:-1
position: 301080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300175-301080:-1:exon

LOC109579111
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109579111
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109579111
subclass of: SO_0000673
so part of: LOC109579111
location: complement(300175..301080)
location: region:300175-301080:-1
so has part: feature:300175-301080:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300175-301080:-1:exon

LOC109579106
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 370443..371403
location: region:370443-371403:1
so has part: feature:370443-371403:1:exon
subclass of: SO_0000010

109579106
type: Gene
SIO_000068: ncbigene

position:370443:1
position: 370443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371403:1
position: 371403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370443-371403:1:exon

LOC109579106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109579106
product: olfactory receptor 5D18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 Proteins
transcript id: XM_019988601.1
SIO_010081: LOC109579106
subclass of: SO_0000673
so part of: LOC109579106
location: 370443..371403
location: region:370443-371403:1
so has part: feature:370443-371403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:370443-371403:1:exon

LOC109579106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109579106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 5D18
translation: MFLSERNKSGATFTLLGFSNYPELQVPLFLTFLAIYSVTVVGNLGMIVXIKINPKLHTPMYFFLSHLSFVDFCYSSIIAPKTXVNLMVEDRTISFVXCXIQFFFFCTFVVTESFLLAVMAYDRFVAICDPLLYVVAMSPRLCATLVVGSYAWGVACSLILTCTVIKLSFQGFNTIDHFFCEXSSLLSLSCSDTYLNQLLLFIXATFNEVSTLVIVLLSYVFIVVTILKMCSACGRHKAFSTCASHLTSISIFHGTILFLYCVPNSKNSRHTVKVXSVFYTVVIPMLNPLIYSLRNKDVKDTVSKIMBSKVFSY
SIO_010081: LOC109579106
subclass of: SO_0000673
so part of: LOC109579106
location: 370460..371401
location: region:370460-371401:1
so has part: feature:370460-371401:1:exon

XP_019844160.1
type: Protein
SIO_000068: ncbiprotein

position:370460:1
position: 370460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371401:1
position: 371401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370460-371401:1:exon

LOC109578951
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(383093..384874)
location: region:383093-384874:-1
so has part: feature:383093-384874:-1:exon

109578951
type: Gene
SIO_000068: ncbigene

position:383093:-1
position: 383093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384874:-1
position: 384874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383093-384874:-1:exon

LOC109578951
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578951
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109578951
subclass of: SO_0000673
so part of: LOC109578951
location: complement(383093..383819)
location: region:383093-383819:-1
so has part: feature:383093-383819:-1:exon

position:383819:-1
position: 383819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383093-383819:-1:exon

LOC109578951
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578951
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109578951
subclass of: SO_0000673
so part of: LOC109578951
location: complement(384608..384874)
location: region:384608-384874:-1
so has part: feature:384608-384874:-1:exon

position:384608:-1
position: 384608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384608-384874:-1:exon

LOC109578952
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 392694..393497
location: region:392694-393497:1
so has part: feature:392694-393497:1:exon
subclass of: SO_0000010

109578952
type: Gene
SIO_000068: ncbigene

position:392694:1
position: 392694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393497:1
position: 393497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392694-393497:1:exon

LOC109578952
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109578952
product: F-box only protein 27-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_019988418.1
SIO_010081: LOC109578952
subclass of: SO_0000673
so part of: LOC109578952
location: 392694..393497
location: region:392694-393497:1
so has part: feature:392694-393497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392694-393497:1:exon

LOC109578952
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109578952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 27-like
translation: MQAAAAPGPGEETMGASTSWGLLSRVPAPHREPQEAPSLNQLPIEMLRNVLSYLPPSTLLWHCRPVCQHWRDLVDGWDLWRSILPWKHPDLWPVILICLPPADNPRPCILGRFCELRPIGRKLTANTPSKDLWNCMMLNGSNGSEEEEDLGVRLKTSGETSYSLAYRCWYKGEISDMEEEGLCRELLDSGNIWISVCHCWTEQQGSDRMYQVVFKLLDANYAISHYFFHKRFSIRPRTGSFSFRIMHAFTSIKKGVHFVLFDHSVKG
SIO_010081: LOC109578952
subclass of: SO_0000673
so part of: LOC109578952
location: 392694..393497
location: region:392694-393497:1
so has part: feature:392694-393497:1:exon

XP_019843977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392694-393497:1:exon

LOC109578953
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(417985..418949)
location: region:417985-418949:-1
so has part: feature:417985-418949:-1:exon

109578953
type: Gene
SIO_000068: ncbigene

position:417985:-1
position: 417985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418949:-1
position: 418949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417985-418949:-1:exon

LOC109578953
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578953
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109578953
subclass of: SO_0000673
so part of: LOC109578953
location: complement(417985..418949)
location: region:417985-418949:-1
so has part: feature:417985-418949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:417985-418949:-1:exon

LOC109578955
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(458476..461402)
location: region:458476-461402:-1
so has part: feature:458476-461402:-1:exon

109578955
type: Gene
SIO_000068: ncbigene

position:458476:-1
position: 458476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461402:-1
position: 461402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458476-461402:-1:exon

LOC109578955
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578955
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578955
subclass of: SO_0000673
so part of: LOC109578955
location: complement(458476..459236)
location: region:458476-459236:-1
so has part: feature:458476-459236:-1:exon

position:459236:-1
position: 459236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458476-459236:-1:exon

LOC109578955
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578955
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578955
subclass of: SO_0000673
so part of: LOC109578955
location: complement(461081..461402)
location: region:461081-461402:-1
so has part: feature:461081-461402:-1:exon

position:461081:-1
position: 461081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461081-461402:-1:exon

LOC109578956
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(485375..486310)
location: region:485375-486310:-1
so has part: feature:485375-486310:-1:exon

109578956
type: Gene
SIO_000068: ncbigene

position:485375:-1
position: 485375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486310:-1
position: 486310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485375-486310:-1:exon

LOC109578956
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578956
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC109578956
subclass of: SO_0000673
so part of: LOC109578956
location: complement(485375..486310)
location: region:485375-486310:-1
so has part: feature:485375-486310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:485375-486310:-1:exon

LOC109578957
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 505948..517527
location: region:505948-517527:1
so has part: feature:505948-517527:1:exon

109578957
type: Gene
SIO_000068: ncbigene

position:505948:1
position: 505948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517527:1
position: 517527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505948-517527:1:exon

LOC109578957
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578957
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578957
subclass of: SO_0000673
so part of: LOC109578957
location: 505948..506947
location: region:505948-506947:1
so has part: feature:505948-506947:1:exon

position:506947:1
position: 506947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505948-506947:1:exon

LOC109578957
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578957
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578957
subclass of: SO_0000673
so part of: LOC109578957
location: 517338..517527
location: region:517338-517527:1
so has part: feature:517338-517527:1:exon

position:517338:1
position: 517338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517338-517527:1:exon

UBE2D1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: UBE2D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(656393..694043)
location: region:656393-694043:-1
so has part: feature:656393-694043:-1:exon
subclass of: SO_0000010

109552996
type: Gene
SIO_000068: ncbigene

position:656393:-1
position: 656393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694043:-1
position: 694043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656393-694043:-1:exon

UBE2D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: UBE2D1
product: ubiquitin conjugating enzyme E2 D1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 17 ESTs, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 258 samples with support for all annotated introns
transcript id: XM_019952783.1
SIO_010081: UBE2D1
subclass of: SO_0000673
so part of: UBE2D1
location: complement(join(656393..658354,659073..659166,663498..663603,665013..665090,667107..667138,667232..667295,693769..694043))
location: region:656393-694043:-1
so has part: feature:693769-694043:-1:exon
so has part: feature:667232-667295:-1:exon
so has part: feature:667107-667138:-1:exon
so has part: feature:665013-665090:-1:exon
so has part: feature:663498-663603:-1:exon
so has part: feature:659073-659166:-1:exon
so has part: feature:656393-658354:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:693769-694043:-1:exon

position:693769:-1
position: 693769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:667232-667295:-1:exon

position:667232:-1
position: 667232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667295:-1
position: 667295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:667107-667138:-1:exon

position:667107:-1
position: 667107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667138:-1
position: 667138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:665013-665090:-1:exon

position:665013:-1
position: 665013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665090:-1
position: 665090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:663498-663603:-1:exon

position:663498:-1
position: 663498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663603:-1
position: 663603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:659073-659166:-1:exon

position:659073:-1
position: 659073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659166:-1
position: 659166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:656393-658354:-1:exon

position:658354:-1
position: 658354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBE2D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: UBE2D1
product: ubiquitin conjugating enzyme E2 D1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 144 samples with support for all annotated introns
transcript id: XM_019952785.1
SIO_010081: UBE2D1
subclass of: SO_0000673
so part of: UBE2D1
location: complement(join(656393..658354,659073..659166,663498..663603,667107..667138,667232..667295,693769..694016))
location: region:656393-694016:-1
so has part: feature:693769-694016:-1:exon
so has part: feature:667232-667295:-1:exon
so has part: feature:667107-667138:-1:exon
so has part: feature:663498-663603:-1:exon
so has part: feature:659073-659166:-1:exon
so has part: feature:656393-658354:-1:exon

position:694016:-1
position: 694016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693769-694016:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667232-667295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667107-667138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663498-663603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659073-659166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:656393-658354:-1:exon

UBE2D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: UBE2D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 D1 isoform X3
translation: MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM
SIO_010081: UBE2D1
subclass of: SO_0000673
so part of: UBE2D1
location: complement(join(658309..658354,659073..659166,663498..663603,667107..667138,667232..667295,693769..693792))
location: region:658309-693792:-1
so has part: feature:693769-693792:-1:exon
so has part: feature:667232-667295:-1:exon
so has part: feature:667107-667138:-1:exon
so has part: feature:663498-663603:-1:exon
so has part: feature:659073-659166:-1:exon
so has part: feature:658309-658354:-1:exon

XP_019808344.1
type: Protein
SIO_000068: ncbiprotein

position:658309:-1
position: 658309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693792:-1
position: 693792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693769-693792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667232-667295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667107-667138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663498-663603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659073-659166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658309-658354:-1:exon

UBE2D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: UBE2D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 D1 isoform X1
translation: MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM
SIO_010081: UBE2D1
subclass of: SO_0000673
so part of: UBE2D1
location: complement(join(658309..658354,659073..659166,663498..663603,665013..665090,667107..667138,667232..667295,693769..693792))
location: region:658309-693792:-1
so has part: feature:693769-693792:-1:exon
so has part: feature:667232-667295:-1:exon
so has part: feature:667107-667138:-1:exon
so has part: feature:665013-665090:-1:exon
so has part: feature:663498-663603:-1:exon
so has part: feature:659073-659166:-1:exon
so has part: feature:658309-658354:-1:exon

XP_019808342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:693769-693792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667232-667295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667107-667138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665013-665090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663498-663603:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659073-659166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658309-658354:-1:exon

UBE2D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: UBE2D1
product: ubiquitin conjugating enzyme E2 D1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_019952784.1
SIO_010081: UBE2D1
subclass of: SO_0000673
so part of: UBE2D1
location: complement(join(658361..658724,659073..659166,663498..663603,665013..665090,667107..667138,667232..667295,693769..694016))
location: region:658361-694016:-1
so has part: feature:693769-694016:-1:exon
so has part: feature:667232-667295:-1:exon
so has part: feature:667107-667138:-1:exon
so has part: feature:665013-665090:-1:exon
so has part: feature:663498-663603:-1:exon
so has part: feature:659073-659166:-1:exon
so has part: feature:658361-658724:-1:exon

position:658361:-1
position: 658361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693769-694016:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667232-667295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667107-667138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665013-665090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663498-663603:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659073-659166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658361-658724:-1:exon

position:658724:-1
position: 658724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBE2D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: UBE2D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 D1 isoform X2
translation: MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKKRSYP
SIO_010081: UBE2D1
subclass of: SO_0000673
so part of: UBE2D1
location: complement(join(658706..658724,659073..659166,663498..663603,665013..665090,667107..667138,667232..667295,693769..693792))
location: region:658706-693792:-1
so has part: feature:693769-693792:-1:exon
so has part: feature:667232-667295:-1:exon
so has part: feature:667107-667138:-1:exon
so has part: feature:665013-665090:-1:exon
so has part: feature:663498-663603:-1:exon
so has part: feature:659073-659166:-1:exon
so has part: feature:658706-658724:-1:exon

XP_019808343.1
type: Protein
SIO_000068: ncbiprotein

position:658706:-1
position: 658706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693769-693792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667232-667295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667107-667138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665013-665090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663498-663603:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659073-659166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658706-658724:-1:exon

LOC109579017
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 709863..710839
location: region:709863-710839:1
so has part: feature:709863-710839:1:exon

109579017
type: Gene
SIO_000068: ncbigene

position:709863:1
position: 709863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710839:1
position: 710839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709863-710839:1:exon

LOC109579017
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: LOC109579017
product: aldose reductase pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_002183761.1
SIO_010081: LOC109579017
so part of: LOC109579017
location: 709863..710839
location: region:709863-710839:1
so has part: feature:709863-710839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:709863-710839:1:exon

CISD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CISD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(741041..759250)
location: region:741041-759250:-1
so has part: feature:741041-759250:-1:exon
subclass of: SO_0000010

109553093
type: Gene
SIO_000068: ncbigene

position:741041:-1
position: 741041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759250:-1
position: 759250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741041-759250:-1:exon

CISD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CISD1
product: CDGSH iron sulfur domain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 132 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 264 samples with support for all annotated introns
transcript id: XM_019953007.1
SIO_010081: CISD1
subclass of: SO_0000673
so part of: CISD1
location: complement(join(741041..741446,751288..751493,759080..759250))
location: region:741041-759250:-1
so has part: feature:759080-759250:-1:exon
so has part: feature:751288-751493:-1:exon
so has part: feature:741041-741446:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:759080-759250:-1:exon

position:759080:-1
position: 759080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:751288-751493:-1:exon

position:751288:-1
position: 751288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751493:-1
position: 751493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:741041-741446:-1:exon

position:741446:-1
position: 741446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CISD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CISD1
product: CDGSH iron sulfur domain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_019953006.1
SIO_010081: CISD1
subclass of: SO_0000673
so part of: CISD1
location: complement(join(741041..741446,751288..751493,752536..752630,754128..755305))
location: region:741041-755305:-1
so has part: feature:754128-755305:-1:exon
so has part: feature:752536-752630:-1:exon
so has part: feature:751288-751493:-1:exon
so has part: feature:741041-741446:-1:exon

position:755305:-1
position: 755305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754128-755305:-1:exon

position:754128:-1
position: 754128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:752536-752630:-1:exon

position:752536:-1
position: 752536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752630:-1
position: 752630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:751288-751493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:741041-741446:-1:exon

CISD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CISD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDGSH iron-sulfur domain-containing protein 1 isoform X2
translation: MXMTSSVRVEWIAAVTIAAGTAAIGYLAYKRFYVKDHRNKSMVNPHIQKDNPKVVHAFDMEDLGDKAVYCRCWRSKKFPLCDGSHTKHNEETGDNVGPLIIKKKDT
SIO_010081: CISD1
subclass of: SO_0000673
so part of: CISD1
location: complement(join(741357..741446,751288..751493,759080..759104))
location: region:741357-759104:-1
so has part: feature:759080-759104:-1:exon
so has part: feature:751288-751493:-1:exon
so has part: feature:741357-741446:-1:exon

XP_019808566.1
type: Protein
SIO_000068: ncbiprotein

position:741357:-1
position: 741357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759104:-1
position: 759104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759080-759104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751288-751493:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:741357-741446:-1:exon

CISD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CISD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDGSH iron-sulfur domain-containing protein 1 isoform X1
translation: MSPLHAGTRQLSSEAEANQTMQHPLLSTILWNWVEWIAAVTIAAGTAAIGYLAYKRFYVKDHRNKSMVNPHIQKDNPKVVHAFDMEDLGDKAVYCRCWRSKKFPLCDGSHTKHNEETGDNVGPLIIKKKDT
SIO_010081: CISD1
subclass of: SO_0000673
so part of: CISD1
location: complement(join(741357..741446,751288..751493,752536..752630,754128..754132))
location: region:741357-754132:-1
so has part: feature:754128-754132:-1:exon
so has part: feature:752536-752630:-1:exon
so has part: feature:751288-751493:-1:exon
so has part: feature:741357-741446:-1:exon

XP_019808565.1
type: Protein
SIO_000068: ncbiprotein

position:754132:-1
position: 754132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754128-754132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752536-752630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751288-751493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:741357-741446:-1:exon

IPMK
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: IPMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 760461..813365
location: region:760461-813365:1
so has part: feature:760461-813365:1:exon
subclass of: SO_0000010

109553141
type: Gene
SIO_000068: ncbigene

position:760461:1
position: 760461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813365:1
position: 813365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760461-813365:1:exon

IPMK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: IPMK
product: inositol polyphosphate multikinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 14 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_019953082.1
SIO_010081: IPMK
subclass of: SO_0000673
so part of: IPMK
location: join(760461..760971,781677..781762,788406..788502,795958..796130,808572..808653,809738..813365)
location: region:760461-813365:1
so has part: feature:760461-760971:1:exon
so has part: feature:781677-781762:1:exon
so has part: feature:788406-788502:1:exon
so has part: feature:795958-796130:1:exon
so has part: feature:808572-808653:1:exon
so has part: feature:809738-813365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:760461-760971:1:exon

position:760971:1
position: 760971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:781677-781762:1:exon

position:781677:1
position: 781677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781762:1
position: 781762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:788406-788502:1:exon

position:788406:1
position: 788406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788502:1
position: 788502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:795958-796130:1:exon

position:795958:1
position: 795958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796130:1
position: 796130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:808572-808653:1:exon

position:808572:1
position: 808572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808653:1
position: 808653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:809738-813365:1:exon

position:809738:1
position: 809738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IPMK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: IPMK
product: inositol polyphosphate multikinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_019953083.1
SIO_010081: IPMK
subclass of: SO_0000673
so part of: IPMK
location: join(760481..760971,781677..781762,788406..788502,795958..796076,808572..808653,809738..813365)
location: region:760481-813365:1
so has part: feature:760481-760971:1:exon
so has part: feature:781677-781762:1:exon
so has part: feature:788406-788502:1:exon
so has part: feature:795958-796076:1:exon
so has part: feature:808572-808653:1:exon
so has part: feature:809738-813365:1:exon

position:760481:1
position: 760481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760481-760971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:781677-781762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:788406-788502:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:795958-796076:1:exon

position:796076:1
position: 796076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:808572-808653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:809738-813365:1:exon

IPMK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: IPMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate multikinase isoform X1
translation: MATEPPSPLRLEAPGPPEMRTPPASETAPEGAPKPAGGRLRFLNGCVPLSHQVAGHMYGKDKVGILQHPDGTVLKQLQPPPRGPRELEFYNMVFAADCTDDILLKLQKYLPKYYGIWSPPTAPNDLYLKLEDVTHKFNKPCIMDVKIGRKSYDPFASSEKIQQQVSKYPLMEEIGFLVLGMRVYHVHSDSYETKNQHYGRSLTKETLKDGVSHFFHNGFCLRRDAIAASIQKIEKILQWFESQKQLNFYASSLLFVYEGSSQPTTTKLNDRTLAEKFLSKGQLSDTDVLEYNNNFHVLNSTANGKIEASVGKSLSKMYACHRKMYSKKHHSQTSLKVENIEQDNGWKSMSQERLNGNVLSQLEKVFCHLPTGCQETAEVEVRMIDFAHVFPSNTVDEGYVYGLKHLITVLQSILDN
SIO_010081: IPMK
subclass of: SO_0000673
so part of: IPMK
location: join(760782..760971,781677..781762,788406..788502,795958..796130,808572..808653,809738..810360)
location: region:760782-810360:1
so has part: feature:760782-760971:1:exon
so has part: feature:781677-781762:1:exon
so has part: feature:788406-788502:1:exon
so has part: feature:795958-796130:1:exon
so has part: feature:808572-808653:1:exon
so has part: feature:809738-810360:1:exon

XP_019808641.1
type: Protein
SIO_000068: ncbiprotein

position:760782:1
position: 760782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810360:1
position: 810360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760782-760971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:781677-781762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:788406-788502:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:795958-796130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:808572-808653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:809738-810360:1:exon

IPMK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: IPMK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate multikinase isoform X2
translation: MATEPPSPLRLEAPGPPEMRTPPASETAPEGAPKPAGGRLRFLNGCVPLSHQVAGHMYGKDKVGILQHPDGTVLKQLQPPPRGPRELEFYNMVFAADCTDDILLKLQKYLPKYYGIWSPPTAPNDLYLKLEDVTHKFNKPCIMDVKIGRKSYDPFASSEKIQQQVYHVHSDSYETKNQHYGRSLTKETLKDGVSHFFHNGFCLRRDAIAASIQKIEKILQWFESQKQLNFYASSLLFVYEGSSQPTTTKLNDRTLAEKFLSKGQLSDTDVLEYNNNFHVLNSTANGKIEASVGKSLSKMYACHRKMYSKKHHSQTSLKVENIEQDNGWKSMSQERLNGNVLSQLEKVFCHLPTGCQETAEVEVRMIDFAHVFPSNTVDEGYVYGLKHLITVLQSILDN
SIO_010081: IPMK
subclass of: SO_0000673
so part of: IPMK
location: join(760782..760971,781677..781762,788406..788502,795958..796076,808572..808653,809738..810360)
location: region:760782-810360:1
so has part: feature:760782-760971:1:exon
so has part: feature:781677-781762:1:exon
so has part: feature:788406-788502:1:exon
so has part: feature:795958-796076:1:exon
so has part: feature:808572-808653:1:exon
so has part: feature:809738-810360:1:exon

XP_019808642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:760782-760971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:781677-781762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:788406-788502:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:795958-796076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:808572-808653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:809738-810360:1:exon

LOC109579099
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579099
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 996744..1000014
location: region:996744-1000014:1
so has part: feature:996744-1000014:1:exon

109579099
type: Gene
SIO_000068: ncbigene

position:996744:1
position: 996744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000014:1
position: 1000014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996744-1000014:1:exon

LOC109579099
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109579099
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109579099
subclass of: SO_0000673
so part of: LOC109579099
location: 996744..997222
location: region:996744-997222:1
so has part: feature:996744-997222:1:exon

position:997222:1
position: 997222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996744-997222:1:exon

LOC109579099
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109579099
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109579099
subclass of: SO_0000673
so part of: LOC109579099
location: 998547..1000014
location: region:998547-1000014:1
so has part: feature:998547-1000014:1:exon

position:998547:1
position: 998547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:998547-1000014:1:exon

LOC109579072
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1089331..1092600)
location: region:1089331-1092600:-1
so has part: feature:1089331-1092600:-1:exon

109579072
type: Gene
SIO_000068: ncbigene

position:1089331:-1
position: 1089331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092600:-1
position: 1092600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089331-1092600:-1:exon

LOC109579072
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109579072
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109579072
subclass of: SO_0000673
so part of: LOC109579072
location: complement(1089331..1090797)
location: region:1089331-1090797:-1
so has part: feature:1089331-1090797:-1:exon

position:1090797:-1
position: 1090797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089331-1090797:-1:exon

LOC109579072
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109579072
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109579072
subclass of: SO_0000673
so part of: LOC109579072
location: complement(1092122..1092600)
location: region:1092122-1092600:-1
so has part: feature:1092122-1092600:-1:exon

position:1092122:-1
position: 1092122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092122-1092600:-1:exon

ZWINT
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ZWINT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2363656..2369365
location: region:2363656-2369365:1
so has part: feature:2363656-2369365:1:exon
subclass of: SO_0000010

109553198
type: Gene
SIO_000068: ncbigene

position:2363656:1
position: 2363656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2369365:1
position: 2369365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2363656-2369365:1:exon

ZWINT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZWINT
product: ZW10 interacting kinetochore protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 212 samples with support for all annotated introns
transcript id: XM_019953180.1
SIO_010081: ZWINT
subclass of: SO_0000673
so part of: ZWINT
location: join(2363656..2363774,2364908..2364998,2365165..2365288,2365449..2365615,2366121..2366177,2366713..2366855,2366936..2367095,2367203..2367285,2367899..2369365)
location: region:2363656-2369365:1
so has part: feature:2363656-2363774:1:exon
so has part: feature:2364908-2364998:1:exon
so has part: feature:2365165-2365288:1:exon
so has part: feature:2365449-2365615:1:exon
so has part: feature:2366121-2366177:1:exon
so has part: feature:2366713-2366855:1:exon
so has part: feature:2366936-2367095:1:exon
so has part: feature:2367203-2367285:1:exon
so has part: feature:2367899-2369365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2363656-2363774:1:exon

position:2363774:1
position: 2363774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2364908-2364998:1:exon

position:2364908:1
position: 2364908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2364998:1
position: 2364998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2365165-2365288:1:exon

position:2365165:1
position: 2365165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2365288:1
position: 2365288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2365449-2365615:1:exon

position:2365449:1
position: 2365449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2365615:1
position: 2365615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2366121-2366177:1:exon

position:2366121:1
position: 2366121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2366177:1
position: 2366177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2366713-2366855:1:exon

position:2366713:1
position: 2366713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2366855:1
position: 2366855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2366936-2367095:1:exon

position:2366936:1
position: 2366936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2367095:1
position: 2367095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2367203-2367285:1:exon

position:2367203:1
position: 2367203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2367285:1
position: 2367285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2367899-2369365:1:exon

position:2367899:1
position: 2367899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZWINT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZWINT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ZW10 interactor
translation: MGAAESEVETAAREVLAKVADILEPVGFQEEAELPAQILAEFVMDSRKKDKLLCSQLQVVDFLQNFLVQEGTAQDQNPLASEDTSRQKALEAKEQWKELKATYQEHVEVITNSLTEALPKVEEAQIKQAQLQEALKQLQAKKQMAMEKLRIAQKQWQLEQEKHLQNLAEASSEVRERQTGAQQELQRLYQELGTLKQQAEQEKDKLQRYQTFLQLLYTLQGKQLFNEAEAEIPQELDLPKDKLQQVTQPQEQNTQDTMGREADNPQPVGDAGLPSLPGRQQHKEES
SIO_010081: ZWINT
subclass of: SO_0000673
so part of: ZWINT
location: join(2363734..2363774,2364908..2364998,2365165..2365288,2365449..2365615,2366121..2366177,2366713..2366855,2366936..2367095,2367203..2367280)
location: region:2363734-2367280:1
so has part: feature:2363734-2363774:1:exon
so has part: feature:2364908-2364998:1:exon
so has part: feature:2365165-2365288:1:exon
so has part: feature:2365449-2365615:1:exon
so has part: feature:2366121-2366177:1:exon
so has part: feature:2366713-2366855:1:exon
so has part: feature:2366936-2367095:1:exon
so has part: feature:2367203-2367280:1:exon

XP_019808739.1
type: Protein
SIO_000068: ncbiprotein

position:2363734:1
position: 2363734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2367280:1
position: 2367280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2363734-2363774:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2364908-2364998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2365165-2365288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2365449-2365615:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2366121-2366177:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2366713-2366855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2366936-2367095:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2367203-2367280:1:exon

LOC109579088
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2413953..2414783)
location: region:2413953-2414783:-1
so has part: feature:2413953-2414783:-1:exon
subclass of: SO_0000010

109579088
type: Gene
SIO_000068: ncbigene

position:2413953:-1
position: 2413953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2414783:-1
position: 2414783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2413953-2414783:-1:exon

LOC109579088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109579088
product: S-phase kinase-associated protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988590.1
SIO_010081: LOC109579088
subclass of: SO_0000673
so part of: LOC109579088
location: complement(join(2413953..2414556,2414692..2414783))
location: region:2413953-2414783:-1
so has part: feature:2414692-2414783:-1:exon
so has part: feature:2413953-2414556:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2414692-2414783:-1:exon

position:2414692:-1
position: 2414692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2413953-2414556:-1:exon

position:2414556:-1
position: 2414556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109579088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109579088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-phase kinase-associated protein 2-like
translation: MDQPSVDHFSNLAQNTNLPRLNLSGCSGFSESALKTLLSNCSRLDELNLSWCYDFTEKPVQVAVAHVSETITQLKLSGYRKNLQRSDVSTLVGRCPNLVHLDLSDSVMLKNDCFPEFYQLDYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKKQEIWGIKCLLSLEKPSCL
SIO_010081: LOC109579088
subclass of: SO_0000673
so part of: LOC109579088
location: complement(join(2413953..2414556,2414692..2414720))
location: region:2413953-2414720:-1
so has part: feature:2414692-2414720:-1:exon
so has part: feature:2413953-2414556:-1:exon

XP_019844149.1
type: Protein
SIO_000068: ncbiprotein

position:2414720:-1
position: 2414720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2414692-2414720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2413953-2414556:-1:exon

LOC109578958
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3113220..3124057)
location: region:3113220-3124057:-1
so has part: feature:3113220-3124057:-1:exon

109578958
type: Gene
SIO_000068: ncbigene

position:3113220:-1
position: 3113220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3124057:-1
position: 3124057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3113220-3124057:-1:exon

LOC109578958
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578958
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC109578958
subclass of: SO_0000673
so part of: LOC109578958
location: complement(3113220..3114120)
location: region:3113220-3114120:-1
so has part: feature:3113220-3114120:-1:exon

position:3114120:-1
position: 3114120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3113220-3114120:-1:exon

LOC109578958
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578958
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC109578958
subclass of: SO_0000673
so part of: LOC109578958
location: complement(3123930..3124057)
location: region:3123930-3124057:-1
so has part: feature:3123930-3124057:-1:exon

position:3123930:-1
position: 3123930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3123930-3124057:-1:exon

PCDH15
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PCDH15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4476383..5389674
location: region:4476383-5389674:1
so has part: feature:4476383-5389674:1:exon
subclass of: SO_0000010

109578959
type: Gene
SIO_000068: ncbigene

position:4476383:1
position: 4476383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5389674:1
position: 5389674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4476383-5389674:1:exon

PCDH15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PCDH15
product: protocadherin related 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 49% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988419.1
SIO_010081: PCDH15
subclass of: SO_0000673
so part of: PCDH15
location: join(4476383..4476473,4665346..4665360,4665863..4665928,4803095..4803255,4843009..4843128,4855485..4855595,4878584..4878754,5029053..5029246,5051472..5051604,5084661..5084740,5093475..5093568,5096259..5096387,5142747..5143052,5146631..5146855,5161072..5161188,5196971..5197111,5198984..5199096,5229960..5230069,5232596..5232736,5275204..5275331,5314747..5314962,5327056..5327144,5342534..5342710,5350255..5350375,5359053..5359159,5361593..5361601,5362917..5363069,5365574..5365579,5387147..5387255,5388820..5389674)
location: region:4476383-5389674:1
so has part: feature:4476383-4476473:1:exon
so has part: feature:4665346-4665360:1:exon
so has part: feature:4665863-4665928:1:exon
so has part: feature:4803095-4803255:1:exon
so has part: feature:4843009-4843128:1:exon
so has part: feature:4855485-4855595:1:exon
so has part: feature:4878584-4878754:1:exon
so has part: feature:5029053-5029246:1:exon
so has part: feature:5051472-5051604:1:exon
so has part: feature:5084661-5084740:1:exon
so has part: feature:5093475-5093568:1:exon
so has part: feature:5096259-5096387:1:exon
so has part: feature:5142747-5143052:1:exon
so has part: feature:5146631-5146855:1:exon
so has part: feature:5161072-5161188:1:exon
so has part: feature:5196971-5197111:1:exon
so has part: feature:5198984-5199096:1:exon
so has part: feature:5229960-5230069:1:exon
so has part: feature:5232596-5232736:1:exon
so has part: feature:5275204-5275331:1:exon
so has part: feature:5314747-5314962:1:exon
so has part: feature:5327056-5327144:1:exon
so has part: feature:5342534-5342710:1:exon
so has part: feature:5350255-5350375:1:exon
so has part: feature:5359053-5359159:1:exon
so has part: feature:5361593-5361601:1:exon
so has part: feature:5362917-5363069:1:exon
so has part: feature:5365574-5365579:1:exon
so has part: feature:5387147-5387255:1:exon
so has part: feature:5388820-5389674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4476383-4476473:1:exon

position:4476473:1
position: 4476473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4665346-4665360:1:exon

position:4665346:1
position: 4665346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4665360:1
position: 4665360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4665863-4665928:1:exon

position:4665863:1
position: 4665863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4665928:1
position: 4665928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4803095-4803255:1:exon

position:4803095:1
position: 4803095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4803255:1
position: 4803255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4843009-4843128:1:exon

position:4843009:1
position: 4843009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4843128:1
position: 4843128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4855485-4855595:1:exon

position:4855485:1
position: 4855485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4855595:1
position: 4855595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4878584-4878754:1:exon

position:4878584:1
position: 4878584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4878754:1
position: 4878754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5029053-5029246:1:exon

position:5029053:1
position: 5029053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5029246:1
position: 5029246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5051472-5051604:1:exon

position:5051472:1
position: 5051472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5051604:1
position: 5051604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5084661-5084740:1:exon

position:5084661:1
position: 5084661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5084740:1
position: 5084740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5093475-5093568:1:exon

position:5093475:1
position: 5093475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5093568:1
position: 5093568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5096259-5096387:1:exon

position:5096259:1
position: 5096259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5096387:1
position: 5096387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5142747-5143052:1:exon

position:5142747:1
position: 5142747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5143052:1
position: 5143052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5146631-5146855:1:exon

position:5146631:1
position: 5146631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5146855:1
position: 5146855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5161072-5161188:1:exon

position:5161072:1
position: 5161072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5161188:1
position: 5161188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5196971-5197111:1:exon

position:5196971:1
position: 5196971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5197111:1
position: 5197111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5198984-5199096:1:exon

position:5198984:1
position: 5198984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5199096:1
position: 5199096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5229960-5230069:1:exon

position:5229960:1
position: 5229960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5230069:1
position: 5230069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5232596-5232736:1:exon

position:5232596:1
position: 5232596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5232736:1
position: 5232736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5275204-5275331:1:exon

position:5275204:1
position: 5275204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5275331:1
position: 5275331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5314747-5314962:1:exon

position:5314747:1
position: 5314747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5314962:1
position: 5314962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5327056-5327144:1:exon

position:5327056:1
position: 5327056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5327144:1
position: 5327144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5342534-5342710:1:exon

position:5342534:1
position: 5342534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5342710:1
position: 5342710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5350255-5350375:1:exon

position:5350255:1
position: 5350255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5350375:1
position: 5350375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:5359053-5359159:1:exon

position:5359053:1
position: 5359053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5359159:1
position: 5359159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:5361593-5361601:1:exon

position:5361593:1
position: 5361593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5361601:1
position: 5361601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:5362917-5363069:1:exon

position:5362917:1
position: 5362917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5363069:1
position: 5363069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:5365574-5365579:1:exon

position:5365574:1
position: 5365574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5365579:1
position: 5365579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:5387147-5387255:1:exon

position:5387147:1
position: 5387147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5387255:1
position: 5387255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:5388820-5389674:1:exon

position:5388820:1
position: 5388820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PCDH15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-15
translation: MFQQFSLWKWFXSGIILGCLFTVCLGQYDDDWQYEDCKLARGGPPATIVAIDEESRNGTILVDNMLIKGTAXGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDLTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYFVIIQANDRAQNLNERRTTTTTLTVDILDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPLTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVELMVGRTYALTVQAADNAPPAERRHSICTVYIEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGKALDRESTDRYILIITASDGRPDGTSTATVNVVVTDVNDNAPVFDPYLPRNLSVVEEEANAFVGQVRAXDPDAGINGQVHYSLGNFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPXGTTFLQIEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPASRVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVIVAFDDGEPVMFSSATVKILVLHPGEIPRFTQEEYRPPPVSELATRGTXVGVISAAAINQSIVYSIVAGNEEDKFGINNITGVIYVNAPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDXNDHPPVFQKKFYIGGVSEDAXMFASVLRVKATDKDTGNYSAMAYRLIIPPIKEGKEGFVVEAYTGLIKTAMLFHNMRRSYFKFQVIATDNYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLVEKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRAIDRNELFNSPAFCIFQQLLNVCDRGLSLHSYSPDVVNGTCLLLGSTLKRGESLGYTEGALLALAFIIILCCIPAILVVLVSYRQFKVRQAECIKTARIQSALPAAKPAAPAPTPVAMPPPPPPPPGAHLYEELGDSTMHKYEMPQYGSRRRLLPPAGQEEYGEVVGEAEEEYEEEEEKAKKVKPKVEIREPSEEEEVVVTIEKPPPAEPTYTTWKRARIFPMIFKKVRGLADKRGIIDLEEEEWQRRLEEEDKDYLKLTLDQDEATESTVESEEESSSDYTEYSEEESEFSESETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIFVARRRPVVEEVKEVKGRKKEPAEEPEELKVEEEEESPAEEQKSELAPVEEPTDLGSRDVTEEGSAESASVEGGVESEEESESSSISSSSESQSGGPWGFQVPEYDPSKYASKKSPGANSDGYNTAL
SIO_010081: PCDH15
subclass of: SO_0000673
so part of: PCDH15
location: join(4476383..4476473,4665346..4665360,4665863..4665928,4803095..4803255,4843009..4843128,4855485..4855595,4878584..4878754,5029053..5029246,5051472..5051604,5084661..5084740,5093475..5093568,5096259..5096387,5142747..5143052,5146631..5146855,5161072..5161188,5196971..5197111,5198984..5199096,5229960..5230069,5232596..5232736,5275204..5275331,5314747..5314962,5327056..5327144,5342534..5342710,5350255..5350375,5359053..5359159,5361593..5361601,5362917..5363069,5365574..5365579,5387147..5387255,5388820..5389674)
location: region:4476383-5389674:1
so has part: feature:4476383-4476473:1:exon
so has part: feature:4665346-4665360:1:exon
so has part: feature:4665863-4665928:1:exon
so has part: feature:4803095-4803255:1:exon
so has part: feature:4843009-4843128:1:exon
so has part: feature:4855485-4855595:1:exon
so has part: feature:4878584-4878754:1:exon
so has part: feature:5029053-5029246:1:exon
so has part: feature:5051472-5051604:1:exon
so has part: feature:5084661-5084740:1:exon
so has part: feature:5093475-5093568:1:exon
so has part: feature:5096259-5096387:1:exon
so has part: feature:5142747-5143052:1:exon
so has part: feature:5146631-5146855:1:exon
so has part: feature:5161072-5161188:1:exon
so has part: feature:5196971-5197111:1:exon
so has part: feature:5198984-5199096:1:exon
so has part: feature:5229960-5230069:1:exon
so has part: feature:5232596-5232736:1:exon
so has part: feature:5275204-5275331:1:exon
so has part: feature:5314747-5314962:1:exon
so has part: feature:5327056-5327144:1:exon
so has part: feature:5342534-5342710:1:exon
so has part: feature:5350255-5350375:1:exon
so has part: feature:5359053-5359159:1:exon
so has part: feature:5361593-5361601:1:exon
so has part: feature:5362917-5363069:1:exon
so has part: feature:5365574-5365579:1:exon
so has part: feature:5387147-5387255:1:exon
so has part: feature:5388820-5389674:1:exon

XP_019843978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4476383-4476473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4665346-4665360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4665863-4665928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4803095-4803255:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4843009-4843128:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4855485-4855595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4878584-4878754:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5029053-5029246:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5051472-5051604:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5084661-5084740:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5093475-5093568:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5096259-5096387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5142747-5143052:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5146631-5146855:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5161072-5161188:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5196971-5197111:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5198984-5199096:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5229960-5230069:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5232596-5232736:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5275204-5275331:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5314747-5314962:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5327056-5327144:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5342534-5342710:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5350255-5350375:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5359053-5359159:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5361593-5361601:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5362917-5363069:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5365574-5365579:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5387147-5387255:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5388820-5389674:1:exon

LOC109578945
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5281323..5298581
location: region:5281323-5298581:1
so has part: feature:5281323-5298581:1:exon

109578945
type: Gene
SIO_000068: ncbigene

position:5281323:1
position: 5281323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5298581:1
position: 5298581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5281323-5298581:1:exon

LOC109578945
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578945
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578945
subclass of: SO_0000673
so part of: LOC109578945
location: 5281323..5281388
location: region:5281323-5281388:1
so has part: feature:5281323-5281388:1:exon

position:5281388:1
position: 5281388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5281323-5281388:1:exon

LOC109578945
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578945
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578945
subclass of: SO_0000673
so part of: LOC109578945
location: 5297906..5298581
location: region:5297906-5298581:1
so has part: feature:5297906-5298581:1:exon

position:5297906:1
position: 5297906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5297906-5298581:1:exon

LOC109579013
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5619792..5620644)
location: region:5619792-5620644:-1
so has part: feature:5619792-5620644:-1:exon

109579013
type: Gene
SIO_000068: ncbigene

position:5619792:-1
position: 5619792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5620644:-1
position: 5620644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5619792-5620644:-1:exon

LOC109579013
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109579013
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109579013
subclass of: SO_0000673
so part of: LOC109579013
location: complement(5619792..5620644)
location: region:5619792-5620644:-1
so has part: feature:5619792-5620644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5619792-5620644:-1:exon

LOC109578960
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5749280..5755190
location: region:5749280-5755190:1
so has part: feature:5749280-5755190:1:exon
subclass of: SO_0000010

109578960
type: Gene
SIO_000068: ncbigene

position:5749280:1
position: 5749280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5755190:1
position: 5755190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5749280-5755190:1:exon

LOC109578960
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109578960
product: scavenger receptor cysteine-rich domain-containing protein SCART1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988420.1
SIO_010081: LOC109578960
subclass of: SO_0000673
so part of: LOC109578960
location: join(5749280..5749421,5749543..5749851,5751245..5751571,5751929..5752234,5752373..5752690,5752761..5753075,5754176..5754490,5754684..5754752,5754835..5755190)
location: region:5749280-5755190:1
so has part: feature:5749280-5749421:1:exon
so has part: feature:5749543-5749851:1:exon
so has part: feature:5751245-5751571:1:exon
so has part: feature:5751929-5752234:1:exon
so has part: feature:5752373-5752690:1:exon
so has part: feature:5752761-5753075:1:exon
so has part: feature:5754176-5754490:1:exon
so has part: feature:5754684-5754752:1:exon
so has part: feature:5754835-5755190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5749280-5749421:1:exon

position:5749421:1
position: 5749421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5749543-5749851:1:exon

position:5749543:1
position: 5749543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5749851:1
position: 5749851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5751245-5751571:1:exon

position:5751245:1
position: 5751245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5751571:1
position: 5751571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5751929-5752234:1:exon

position:5751929:1
position: 5751929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5752234:1
position: 5752234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5752373-5752690:1:exon

position:5752373:1
position: 5752373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5752690:1
position: 5752690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5752761-5753075:1:exon

position:5752761:1
position: 5752761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5753075:1
position: 5753075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5754176-5754490:1:exon

position:5754176:1
position: 5754176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5754490:1
position: 5754490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5754684-5754752:1:exon

position:5754684:1
position: 5754684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5754752:1
position: 5754752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5754835-5755190:1:exon

position:5754835:1
position: 5754835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109578960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109578960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scavenger receptor cysteine-rich domain-containing protein SCART1-like
translation: MFGVGGGGRAGVGAGRPVQDLRGEARTPGDCSGHXVEEPGRGAWELGRGLEVVIKLVGGRSPCAGVPGLQHSNQTLTSCDPQSLEAGTVLCKELGCGSMLQAPSPLPETEGPRKGQQFVGCEGSEPTVLNCKIDWANFKPCVSNDEVICSGHXEARLVGGEHSCAGXLEVRRGLTWGTVCDADLDLAXAHVVCRELQCGAAVSTPQGAHFGQGPGLVWAEAFRCAGNESLLFHCPREPGHRCGHGQDAGLRCSGEATGAEFRLVNGSSACEGRVELQVQGAWAPLCAAHWDLADATVLCHQLDCGNAVATPPGGHFGGGASAPWPDEVHCVGTEPYLWSCAVSTLGAPACGPGDAAAAVCSGLPDALRLRDGQSRCDGRVEVSLDGVWGRVLDEAWDLRGAAVVCRQLGCGAAERAYEAAAPARGAVPLGLSRVRCAGTEPRLTRCNVSAAALVSAGASRDAGVVCSGSLQVRLAAGPGRCAGRVELLHAGEWGTVCDDGWDLRDAQVVCRQLGCGHALGAPGAAHFGAGAGRIWMDELACEGHEAALWRCPSRGWGRHDCGHKEDAGALCSESVALRLRGGAGPCAGWLDVFHNGTWGAVCSNALKDASLSIICQQLGCGERGWLENRPGHTSLGTSWVDNIQCRRLRSSTLWQCPSAPWHPHSCTRGEEVWITCAGSSGTATQDSGEALNCSXMGSCPEEGELRVRGGEDRCSGRVELWHAGSWGTVCDDSWDLADAEVVCRQLGCGRAVDAVAGAAFGPGSGPVWLDEVGCRGSEASLWGCPAQPWGRGDCGHKEDAGVRCAGEWSRGVXLPLQG
SIO_010081: LOC109578960
subclass of: SO_0000673
so part of: LOC109578960
location: join(5749280..5749421,5749543..5749851,5751245..5751571,5751929..5752234,5752373..5752690,5752761..5753075,5754176..5754490,5754684..5754752,5754835..5755190)
location: region:5749280-5755190:1
so has part: feature:5749280-5749421:1:exon
so has part: feature:5749543-5749851:1:exon
so has part: feature:5751245-5751571:1:exon
so has part: feature:5751929-5752234:1:exon
so has part: feature:5752373-5752690:1:exon
so has part: feature:5752761-5753075:1:exon
so has part: feature:5754176-5754490:1:exon
so has part: feature:5754684-5754752:1:exon
so has part: feature:5754835-5755190:1:exon

XP_019843979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5749280-5749421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5749543-5749851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5751245-5751571:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5751929-5752234:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5752373-5752690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5752761-5753075:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5754176-5754490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5754684-5754752:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5754835-5755190:1:exon

LOC109578961
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5784581..5785558
location: region:5784581-5785558:1
so has part: feature:5784581-5785558:1:exon
subclass of: SO_0000010

109578961
type: Gene
SIO_000068: ncbigene

position:5784581:1
position: 5784581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5785558:1
position: 5785558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5784581-5785558:1:exon

LOC109578961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109578961
product: olfactory receptor 13A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
transcript id: XM_019988421.1
SIO_010081: LOC109578961
subclass of: SO_0000673
so part of: LOC109578961
location: 5784581..5785558
location: region:5784581-5785558:1
so has part: feature:5784581-5785558:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5784581-5785558:1:exon

LOC109578961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109578961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 13A1-like
translation: MSPCARPAVSQRLQGLEHHVDTHNHSSVEEFALQSFSEEPGLRGXFLVLFLLLFLGALAGNTLIVTAIGPHPGLHTPMYFFLTNLAVLDIVCTSTVLPKLLENLVVKGGTISYQGCMTQLFFLTWFLGAELLLLTVMAYDRYVAICRPLHYSSRMGRPVXVLLAGSVWAVSAVSTSVHTGLMTRLTFCGPNQIQHFLCEVPTLLLLSCSPTTLNNVMIVVADVYFGVVNFLLTMASYGCIIASILRMRSAAGKQRAFSTCSSHLLVVTLYYSTVIYTYILPGSGSSLENGKVVAVLYTAVSPTLNPLIYSLRNKDVKVALRKVFS
SIO_010081: LOC109578961
subclass of: SO_0000673
so part of: LOC109578961
location: 5784581..5785558
location: region:5784581-5785558:1
so has part: feature:5784581-5785558:1:exon

XP_019843980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5784581-5785558:1:exon

LOC109579103
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5803462..5804400
location: region:5803462-5804400:1
so has part: feature:5803462-5804400:1:exon
subclass of: SO_0000010

109579103
type: Gene
SIO_000068: ncbigene

position:5803462:1
position: 5803462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5804400:1
position: 5804400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5803462-5804400:1:exon

LOC109579103
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109579103
product: olfactory receptor 13G1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
transcript id: XM_019988599.1
SIO_010081: LOC109579103
subclass of: SO_0000673
so part of: LOC109579103
location: 5803462..5804400
location: region:5803462-5804400:1
so has part: feature:5803462-5804400:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5803462-5804400:1:exon

LOC109579103
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109579103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 13G1-like
translation: MLAPSRAVMNQTLVTEFFILGFSETPGLXTLLFSAFLLLYTVALSGNLLIVVVINSSPALHTPMYFFLVNLAVVDILCTSTILPELLVGMVASKTISYGGCMAQLFFFTWSMGAELLLFSAMAYDRYVAICRPLHYSALMGPRVCALLAGVVWTVSLINTGVHTGLMLRLPFCRSNVVEHFFCEIPPLLKLSCAPTQLNETMAFTADIFLAVGNFSVITLSYGCIIGSILRMXSAVGKRRAFSTCSSHLLVVTLYYSTVIYTYIRPASSYSLDKDKLVSVIYTSXAPSLNPLIYSLRNMEVKAALRRLLSCS
SIO_010081: LOC109579103
subclass of: SO_0000673
so part of: LOC109579103
location: 5803462..5804400
location: region:5803462-5804400:1
so has part: feature:5803462-5804400:1:exon

XP_019844158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5803462-5804400:1:exon

LOC109578962
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5842988..5843977
location: region:5842988-5843977:1
so has part: feature:5842988-5843977:1:exon
subclass of: SO_0000010

109578962
type: Gene
SIO_000068: ncbigene

position:5842988:1
position: 5842988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5843977:1
position: 5843977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5842988-5843977:1:exon

LOC109578962
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109578962
product: olfactory receptor 13A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
transcript id: XM_019988422.1
SIO_010081: LOC109578962
subclass of: SO_0000673
so part of: LOC109578962
location: 5842988..5843977
location: region:5842988-5843977:1
so has part: feature:5842988-5843977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5842988-5843977:1:exon

LOC109578962
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109578962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 13A1-like
translation: MEQGLGAAPGWATRSNETLMIEFVLQGFSELPRLRLPLFCCFFSLYTVALMGNAVIIAVGSHSASLQSPMYFFLCNLAAMDIVCTSSVLPKALVGLAFEENTISFPGCMAQLFFLTWSASSELLLLTAMAYDRYVAICRPLHYSSRXSPRLCRSLAVGVWAXCALNGSLHAGLMTRLSFCGPNVIAHFFCEIPPLLLLSCSPTLVNSIMTVLADAFYGVLNFLLTLVSYGCIVASILRMRSAAGRRRAFSTCSSHLLVVSVYYSAVFCAYISPASSYSPERSKVSAVLYTMLSPTLNPIVYSLRNTEIKHALGRLVQALLCPEVRGLPP
SIO_010081: LOC109578962
subclass of: SO_0000673
so part of: LOC109578962
location: 5842988..5843977
location: region:5842988-5843977:1
so has part: feature:5842988-5843977:1:exon

XP_019843981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5842988-5843977:1:exon

LOC109553162
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109553162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5856485..5867189
location: region:5856485-5867189:1
so has part: feature:5856485-5867189:1:exon
subclass of: SO_0000010

109553162
type: Gene
SIO_000068: ncbigene

position:5856485:1
position: 5856485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5867189:1
position: 5867189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5856485-5867189:1:exon

LOC109553162
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109553162
product: cytochrome P450 2E1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 157 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_019953123.1
SIO_010081: LOC109553162
subclass of: SO_0000673
so part of: LOC109553162
location: join(5856485..5856703,5857646..5857805,5860892..5861041,5861319..5861479,5861933..5862109,5863103..5863244,5865128..5865315,5865795..5865936,5866611..5867189)
location: region:5856485-5867189:1
so has part: feature:5856485-5856703:1:exon
so has part: feature:5857646-5857805:1:exon
so has part: feature:5860892-5861041:1:exon
so has part: feature:5861319-5861479:1:exon
so has part: feature:5861933-5862109:1:exon
so has part: feature:5863103-5863244:1:exon
so has part: feature:5865128-5865315:1:exon
so has part: feature:5865795-5865936:1:exon
so has part: feature:5866611-5867189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5856485-5856703:1:exon

position:5856703:1
position: 5856703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5857646-5857805:1:exon

position:5857646:1
position: 5857646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5857805:1
position: 5857805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5860892-5861041:1:exon

position:5860892:1
position: 5860892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5861041:1
position: 5861041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5861319-5861479:1:exon

position:5861319:1
position: 5861319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5861479:1
position: 5861479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5861933-5862109:1:exon

position:5861933:1
position: 5861933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5862109:1
position: 5862109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5863103-5863244:1:exon

position:5863103:1
position: 5863103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5863244:1
position: 5863244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5865128-5865315:1:exon

position:5865128:1
position: 5865128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5865315:1
position: 5865315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5865795-5865936:1:exon

position:5865795:1
position: 5865795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5865936:1
position: 5865936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5866611-5867189:1:exon

position:5866611:1
position: 5866611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109553162
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109553162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 2E1
translation: MGASSKVGRSPKGTMAALGITVALLVWMATLLFISIWKHIYSSWKLPPGPFPLPIIGNLLQLDIKNIPKSFTRLAERYGPVFTLYLGSQRAVVVHGYKPVKEVLLDYKNEFSGRGENPGFQMHKNNGIIFNNGSTWRDTRRFSLTTLRDLGMGKQGNEQRIQREAHFLLEVLRKTQGQPFDPTFVVGFAPYNVISDILFHKRFDYKDQTSLRLMSLFNENFYLLSSPWIQLYNNFPDYLQYLPGSHRKLLKNVSEVKSYALERVKDHQKSLEPSCPRGFLDTMLIEMAKERHSVDPMYTLENIAVTVADLLFAGTETTSTTLRYGLLILMKYPEVEEKLHEEIDRVIGPSRIPAVKDRLDMPYLDAVVHEIQRFIDLLPSNLLHEATQDTVFRGYVIPKGTVVIPTLDSVLHDRQEFPEPEKFKPEHFLNENGKFKYSDHFKAFSAGKRVCVGEGLARMELFLLLAAILQHFNLKSLVDPKDIDLSPIAIGFGKIPPRYKLCLIPRSKV
SIO_010081: LOC109553162
subclass of: SO_0000673
so part of: LOC109553162
location: join(5856485..5856703,5857646..5857805,5860892..5861041,5861319..5861479,5861933..5862109,5863103..5863244,5865128..5865315,5865795..5865936,5866611..5866801)
location: region:5856485-5866801:1
so has part: feature:5856485-5856703:1:exon
so has part: feature:5857646-5857805:1:exon
so has part: feature:5860892-5861041:1:exon
so has part: feature:5861319-5861479:1:exon
so has part: feature:5861933-5862109:1:exon
so has part: feature:5863103-5863244:1:exon
so has part: feature:5865128-5865315:1:exon
so has part: feature:5865795-5865936:1:exon
so has part: feature:5866611-5866801:1:exon

XP_019808682.1
type: Protein
SIO_000068: ncbiprotein

position:5866801:1
position: 5866801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5856485-5856703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5857646-5857805:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5860892-5861041:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5861319-5861479:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5861933-5862109:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5863103-5863244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5865128-5865315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5865795-5865936:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5866611-5866801:1:exon

SYCE1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: SYCE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5890777..5902768)
location: region:5890777-5902768:-1
so has part: feature:5890777-5902768:-1:exon
subclass of: SO_0000010

109553254
type: Gene
SIO_000068: ncbigene

position:5890777:-1
position: 5890777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5902768:-1
position: 5902768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5890777-5902768:-1:exon

SYCE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SYCE1
product: synaptonemal complex central element protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_019953232.1
SIO_010081: SYCE1
subclass of: SO_0000673
so part of: SYCE1
location: complement(join(5890777..5890924,5891149..5891236,5891387..5891497,5891569..5891689,5891767..5891833,5892588..5892651,5892899..5892988,5893646..5893700,5893929..5893976,5894599..5894673,5894989..5895048,5895692..5895754,5902666..5902768))
location: region:5890777-5902768:-1
so has part: feature:5902666-5902768:-1:exon
so has part: feature:5895692-5895754:-1:exon
so has part: feature:5894989-5895048:-1:exon
so has part: feature:5894599-5894673:-1:exon
so has part: feature:5893929-5893976:-1:exon
so has part: feature:5893646-5893700:-1:exon
so has part: feature:5892899-5892988:-1:exon
so has part: feature:5892588-5892651:-1:exon
so has part: feature:5891767-5891833:-1:exon
so has part: feature:5891569-5891689:-1:exon
so has part: feature:5891387-5891497:-1:exon
so has part: feature:5891149-5891236:-1:exon
so has part: feature:5890777-5890924:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5902666-5902768:-1:exon

position:5902666:-1
position: 5902666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5895692-5895754:-1:exon

position:5895692:-1
position: 5895692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5895754:-1
position: 5895754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5894989-5895048:-1:exon

position:5894989:-1
position: 5894989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5895048:-1
position: 5895048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5894599-5894673:-1:exon

position:5894599:-1
position: 5894599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5894673:-1
position: 5894673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5893929-5893976:-1:exon

position:5893929:-1
position: 5893929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5893976:-1
position: 5893976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5893646-5893700:-1:exon

position:5893646:-1
position: 5893646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5893700:-1
position: 5893700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5892899-5892988:-1:exon

position:5892899:-1
position: 5892899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5892988:-1
position: 5892988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5892588-5892651:-1:exon

position:5892588:-1
position: 5892588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5892651:-1
position: 5892651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5891767-5891833:-1:exon

position:5891767:-1
position: 5891767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5891833:-1
position: 5891833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5891569-5891689:-1:exon

position:5891569:-1
position: 5891569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5891689:-1
position: 5891689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5891387-5891497:-1:exon

position:5891387:-1
position: 5891387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5891497:-1
position: 5891497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5891149-5891236:-1:exon

position:5891149:-1
position: 5891149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5891236:-1
position: 5891236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5890777-5890924:-1:exon

position:5890924:-1
position: 5890924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYCE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SYCE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex central element protein 1
translation: MAGRPGSSNAEAAGAVGPTDEARGQAESSQKIEDLMEMVKKLQKVGSLEPRVEVLINRINEVQQAKKKASEELGDARTVWETLQKELDSLSGEKVRLKEILSKKQETLRVLRLHCQDKENEAQRKQTMLQECKERISALNSQIEQEKNKQRQLRLDFEEQLEDLMGQYKDLWEFHKPERLALEISTLDSGKEQLLKEEKLVEAKLEDVKHRLCSQFGAKGHTINEGLFLRSPEAAAVVHLFEEENRKAQELLEAAAQRQEQLQQKCQQLQQKRQRLKEELEKLGVQVLAQAQSKQEEEAGLGEAANPKPLGVSEEKDQEPSTK
SIO_010081: SYCE1
subclass of: SO_0000673
so part of: SYCE1
location: complement(join(5890865..5890924,5891149..5891236,5891387..5891497,5891569..5891689,5891767..5891833,5892588..5892651,5892899..5892988,5893646..5893700,5893929..5893976,5894599..5894673,5894989..5895048,5895692..5895754,5902666..5902735))
location: region:5890865-5902735:-1
so has part: feature:5902666-5902735:-1:exon
so has part: feature:5895692-5895754:-1:exon
so has part: feature:5894989-5895048:-1:exon
so has part: feature:5894599-5894673:-1:exon
so has part: feature:5893929-5893976:-1:exon
so has part: feature:5893646-5893700:-1:exon
so has part: feature:5892899-5892988:-1:exon
so has part: feature:5892588-5892651:-1:exon
so has part: feature:5891767-5891833:-1:exon
so has part: feature:5891569-5891689:-1:exon
so has part: feature:5891387-5891497:-1:exon
so has part: feature:5891149-5891236:-1:exon
so has part: feature:5890865-5890924:-1:exon

XP_019808791.1
type: Protein
SIO_000068: ncbiprotein

position:5890865:-1
position: 5890865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5902735:-1
position: 5902735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5902666-5902735:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5895692-5895754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5894989-5895048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5894599-5894673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5893929-5893976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5893646-5893700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5892899-5892988:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5892588-5892651:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5891767-5891833:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5891569-5891689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5891387-5891497:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5891149-5891236:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5890865-5890924:-1:exon

LOC109578963
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5910218..5920191
location: region:5910218-5920191:1
so has part: feature:5910218-5920191:1:exon

109578963
type: Gene
SIO_000068: ncbigene

position:5910218:1
position: 5910218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5920191:1
position: 5920191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5910218-5920191:1:exon

LOC109578963
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC109578963
subclass of: SO_0000673
so part of: LOC109578963
location: 5910218..5910223
location: region:5910218-5910223:1
so has part: feature:5910218-5910223:1:exon

position:5910223:1
position: 5910223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5910218-5910223:1:exon

LOC109578963
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC109578963
subclass of: SO_0000673
so part of: LOC109578963
location: 5910752..5910888
location: region:5910752-5910888:1
so has part: feature:5910752-5910888:1:exon

position:5910752:1
position: 5910752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5910888:1
position: 5910888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5910752-5910888:1:exon

LOC109578963
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC109578963
subclass of: SO_0000673
so part of: LOC109578963
location: 5911580..5911588
location: region:5911580-5911588:1
so has part: feature:5911580-5911588:1:exon

position:5911580:1
position: 5911580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5911588:1
position: 5911588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5911580-5911588:1:exon

LOC109578963
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC109578963
subclass of: SO_0000673
so part of: LOC109578963
location: 5913128..5913230
location: region:5913128-5913230:1
so has part: feature:5913128-5913230:1:exon

position:5913128:1
position: 5913128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5913230:1
position: 5913230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5913128-5913230:1:exon

LOC109578963
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC109578963
subclass of: SO_0000673
so part of: LOC109578963
location: 5913762..5913903
location: region:5913762-5913903:1
so has part: feature:5913762-5913903:1:exon

position:5913762:1
position: 5913762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5913903:1
position: 5913903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5913762-5913903:1:exon

LOC109578963
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC109578963
subclass of: SO_0000673
so part of: LOC109578963
location: 5916174..5916325
location: region:5916174-5916325:1
so has part: feature:5916174-5916325:1:exon

position:5916174:1
position: 5916174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5916325:1
position: 5916325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5916174-5916325:1:exon

LOC109578963
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC109578963
subclass of: SO_0000673
so part of: LOC109578963
location: 5919793..5920191
location: region:5919793-5920191:1
so has part: feature:5919793-5920191:1:exon

position:5919793:1
position: 5919793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5919793-5920191:1:exon

LOC109553248
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109553248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5943778..5945683
location: region:5943778-5945683:1
so has part: feature:5943778-5945683:1:exon
subclass of: SO_0000010

109553248
type: Gene
SIO_000068: ncbigene

position:5943778:1
position: 5943778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5945683:1
position: 5945683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5943778-5945683:1:exon

LOC109553248
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109553248
product: olfactory receptor 5M9-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019953227.1
SIO_010081: LOC109553248
subclass of: SO_0000673
so part of: LOC109553248
location: 5943778..5945683
location: region:5943778-5945683:1
so has part: feature:5943778-5945683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5943778-5945683:1:exon

LOC109553248
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109553248
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: olfactory receptor 5M9-like
translation: MPNFTDVTEFVLLGLTSRQELQGLFFVVFLVVYMITLIGNTGIIILISISLQLQSSMYFFLSXLSFVDVWFSSXVTLKMLENLLSDXKPISXVGCLVQCYFFXALVHVEVYILAVMAFDCYMTICNPLLYGSKMSRSVCAHLISVTHIYGFSVSQICTLWTYGLYFCGNFEINHFYCADPXLIKTACGGVHXKECTMIVIAGINFTYSLSVVLXSYTLIXAAVLHMCSADGRRKAFSTCGSHLTAVTMFYGALLFMYLRRPTEESVEQGKMVAVFYPTVIPMLNPMIXSLRNEDVKEXVNXAIVKASLKQCTCSA
SIO_010081: LOC109553248
subclass of: SO_0000673
so part of: LOC109553248
location: 5943861..5944806
location: region:5943861-5944806:1
so has part: feature:5943861-5944806:1:exon

XP_019808786.1
type: Protein
SIO_000068: ncbiprotein

position:5943861:1
position: 5943861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5944806:1
position: 5944806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5943861-5944806:1:exon

LOC109578964
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5950091..5951289)
location: region:5950091-5951289:-1
so has part: feature:5950091-5951289:-1:exon

109578964
type: Gene
SIO_000068: ncbigene

position:5950091:-1
position: 5950091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5951289:-1
position: 5951289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5950091-5951289:-1:exon

LOC109578964
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578964
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578964
subclass of: SO_0000673
so part of: LOC109578964
location: complement(5950091..5951289)
location: region:5950091-5951289:-1
so has part: feature:5950091-5951289:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5950091-5951289:-1:exon

MBL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: MBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6570984..6575958
location: region:6570984-6575958:1
so has part: feature:6570984-6575958:1:exon
subclass of: SO_0000010

109553201
type: Gene
SIO_000068: ncbigene

position:6570984:1
position: 6570984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6575958:1
position: 6575958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6570984-6575958:1:exon

MBL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBL2
product: mannose binding lectin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_019953186.1
SIO_010081: MBL2
subclass of: SO_0000673
so part of: MBL2
location: join(6570984..6571085,6572143..6572341,6572730..6572846,6574182..6574250,6575261..6575958)
location: region:6570984-6575958:1
so has part: feature:6570984-6571085:1:exon
so has part: feature:6572143-6572341:1:exon
so has part: feature:6572730-6572846:1:exon
so has part: feature:6574182-6574250:1:exon
so has part: feature:6575261-6575958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6570984-6571085:1:exon

position:6571085:1
position: 6571085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6572143-6572341:1:exon

position:6572143:1
position: 6572143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6572341:1
position: 6572341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6572730-6572846:1:exon

position:6572730:1
position: 6572730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6572846:1
position: 6572846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6574182-6574250:1:exon

position:6574182:1
position: 6574182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6574250:1
position: 6574250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6575261-6575958:1:exon

position:6575261:1
position: 6575261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MBL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mannose-binding protein C
translation: MSLFTSLPFLLLTAVTASCADTETENCENIRKTCPVIACGPPGIXGIPGKDGRDGAKGEKGEPGQGLRGSQGPPGKMGPQGTPGIPGIPGPIGQKGDPGENMGDYISLATSERATLQSELNQIKNWLIFSLGKRVGKKAFFTNGKKMPFNEVKTLCAQFQGRVATPMNAEENRALKDLVTEEAFLGITDQETEGKFVDLTGKGVTYQNWNDGEPNNTSPGEHCVTLLSDGTWNDIACSASFLTVCEFSL
SIO_010081: MBL2
subclass of: SO_0000673
so part of: MBL2
location: join(6572152..6572341,6572730..6572846,6574182..6574250,6575261..6575634)
location: region:6572152-6575634:1
so has part: feature:6572152-6572341:1:exon
so has part: feature:6572730-6572846:1:exon
so has part: feature:6574182-6574250:1:exon
so has part: feature:6575261-6575634:1:exon

XP_019808745.1
type: Protein
SIO_000068: ncbiprotein

position:6572152:1
position: 6572152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6575634:1
position: 6575634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6572152-6572341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6572730-6572846:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6574182-6574250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6575261-6575634:1:exon

DKK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: DKK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7113472..7116581)
location: region:7113472-7116581:-1
so has part: feature:7113472-7116581:-1:exon
subclass of: SO_0000010

109553197
type: Gene
SIO_000068: ncbigene

position:7113472:-1
position: 7113472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7116581:-1
position: 7116581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7113472-7116581:-1:exon

DKK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: DKK1
product: dickkopf WNT signaling pathway inhibitor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 11 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 202 samples with support for all annotated introns
transcript id: XM_019953179.1
SIO_010081: DKK1
subclass of: SO_0000673
so part of: DKK1
location: complement(join(7113472..7114367,7114484..7114627,7115776..7115932,7116166..7116581))
location: region:7113472-7116581:-1
so has part: feature:7116166-7116581:-1:exon
so has part: feature:7115776-7115932:-1:exon
so has part: feature:7114484-7114627:-1:exon
so has part: feature:7113472-7114367:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7116166-7116581:-1:exon

position:7116166:-1
position: 7116166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7115776-7115932:-1:exon

position:7115776:-1
position: 7115776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7115932:-1
position: 7115932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7114484-7114627:-1:exon

position:7114484:-1
position: 7114484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7114627:-1
position: 7114627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7113472-7114367:-1:exon

position:7114367:-1
position: 7114367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DKK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: DKK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dickkopf-related protein 1
translation: MTALGTAGAARVLVALVAAALCGHPLLGVSATLNFVLNSNAIKNLPRPLGGAAGHPGSAVSAAPGIPFEGGSKYQTIDNHQPYPCAEDEECSTDEYCASPTRGAGAQICLACRKLRKRCMRHAMCCPGNHCKNGICMPSDQNHFHRGEIEETIIESFGNEHSTLDGYSRRTTLSSRMYHTKGQEGSACLRSSDCAAGLCCARHFWSKICKPVLKEGQVCTKHRRKGSHGLEIFQRCYCGEGLSCQIQKDHHQASNSSRLHTCQRH
SIO_010081: DKK1
subclass of: SO_0000673
so part of: DKK1
location: complement(join(7114114..7114367,7114484..7114627,7115776..7115932,7116166..7116408))
location: region:7114114-7116408:-1
so has part: feature:7116166-7116408:-1:exon
so has part: feature:7115776-7115932:-1:exon
so has part: feature:7114484-7114627:-1:exon
so has part: feature:7114114-7114367:-1:exon

XP_019808738.1
type: Protein
SIO_000068: ncbiprotein

position:7114114:-1
position: 7114114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7116408:-1
position: 7116408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7116166-7116408:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7115776-7115932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7114484-7114627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7114114-7114367:-1:exon

PRKG1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PRKG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7162530..8833449)
location: region:7162530-8833449:-1
so has part: feature:7162530-8833449:-1:exon
subclass of: SO_0000010

109579117
type: Gene
SIO_000068: ncbigene

position:7162530:-1
position: 7162530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8833449:-1
position: 8833449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7162530-8833449:-1:exon

PRKG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PRKG1
product: protein kinase, cGMP-dependent, type I, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 15 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988619.1
SIO_010081: PRKG1
subclass of: SO_0000673
so part of: PRKG1
location: complement(join(7162530..7166949,7168421..7168487,7169716..7169778,7169860..7169982,7178927..7179090,7180596..7180737,7191708..7191797,7193290..7193429,7217999..7218095,7289509..7289583,7339154..7339219,7342682..7342684,7342839..7342869,7421500..7421512,7429510..7429538,7447936..7447953,7450065..7450094,7452875..7452890,7490482..7490517,7597880..7597943,7714916..7715021,8098755..8098868,8485263..8485429,8832525..8833449))
location: region:7162530-8833449:-1
so has part: feature:8832525-8833449:-1:exon
so has part: feature:8485263-8485429:-1:exon
so has part: feature:8098755-8098868:-1:exon
so has part: feature:7714916-7715021:-1:exon
so has part: feature:7597880-7597943:-1:exon
so has part: feature:7490482-7490517:-1:exon
so has part: feature:7452875-7452890:-1:exon
so has part: feature:7450065-7450094:-1:exon
so has part: feature:7447936-7447953:-1:exon
so has part: feature:7429510-7429538:-1:exon
so has part: feature:7421500-7421512:-1:exon
so has part: feature:7342839-7342869:-1:exon
so has part: feature:7342682-7342684:-1:exon
so has part: feature:7339154-7339219:-1:exon
so has part: feature:7289509-7289583:-1:exon
so has part: feature:7217999-7218095:-1:exon
so has part: feature:7193290-7193429:-1:exon
so has part: feature:7191708-7191797:-1:exon
so has part: feature:7180596-7180737:-1:exon
so has part: feature:7178927-7179090:-1:exon
so has part: feature:7169860-7169982:-1:exon
so has part: feature:7169716-7169778:-1:exon
so has part: feature:7168421-7168487:-1:exon
so has part: feature:7162530-7166949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8832525-8833449:-1:exon

position:8832525:-1
position: 8832525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8485263-8485429:-1:exon

position:8485263:-1
position: 8485263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8485429:-1
position: 8485429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8098755-8098868:-1:exon

position:8098755:-1
position: 8098755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8098868:-1
position: 8098868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7714916-7715021:-1:exon

position:7714916:-1
position: 7714916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7715021:-1
position: 7715021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7597880-7597943:-1:exon

position:7597880:-1
position: 7597880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7597943:-1
position: 7597943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7490482-7490517:-1:exon

position:7490482:-1
position: 7490482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7490517:-1
position: 7490517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7452875-7452890:-1:exon

position:7452875:-1
position: 7452875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7452890:-1
position: 7452890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7450065-7450094:-1:exon

position:7450065:-1
position: 7450065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7450094:-1
position: 7450094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7447936-7447953:-1:exon

position:7447936:-1
position: 7447936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7447953:-1
position: 7447953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7429510-7429538:-1:exon

position:7429510:-1
position: 7429510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7429538:-1
position: 7429538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7421500-7421512:-1:exon

position:7421500:-1
position: 7421500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7421512:-1
position: 7421512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7342839-7342869:-1:exon

position:7342839:-1
position: 7342839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7342869:-1
position: 7342869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7342682-7342684:-1:exon

position:7342682:-1
position: 7342682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7342684:-1
position: 7342684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7339154-7339219:-1:exon

position:7339154:-1
position: 7339154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7339219:-1
position: 7339219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7289509-7289583:-1:exon

position:7289509:-1
position: 7289509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7289583:-1
position: 7289583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7217999-7218095:-1:exon

position:7217999:-1
position: 7217999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7218095:-1
position: 7218095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7193290-7193429:-1:exon

position:7193290:-1
position: 7193290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7193429:-1
position: 7193429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7191708-7191797:-1:exon

position:7191708:-1
position: 7191708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7191797:-1
position: 7191797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7180596-7180737:-1:exon

position:7180596:-1
position: 7180596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7180737:-1
position: 7180737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7178927-7179090:-1:exon

position:7178927:-1
position: 7178927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7179090:-1
position: 7179090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7169860-7169982:-1:exon

position:7169860:-1
position: 7169860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7169982:-1
position: 7169982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7169716-7169778:-1:exon

position:7169716:-1
position: 7169716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7169778:-1
position: 7169778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7168421-7168487:-1:exon

position:7168421:-1
position: 7168421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7168487:-1
position: 7168487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7162530-7166949:-1:exon

position:7166949:-1
position: 7166949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRKG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PRKG1
product: protein kinase, cGMP-dependent, type I, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 16 ESTs, 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988618.1
SIO_010081: PRKG1
subclass of: SO_0000673
so part of: PRKG1
location: complement(join(7162530..7166949,7168421..7168487,7169716..7169778,7169860..7169982,7178927..7179090,7180596..7180737,7191708..7191797,7193290..7193429,7217999..7218095,7289509..7289583,7339154..7339219,7342682..7342684,7342839..7342869,7421500..7421512,7429510..7429538,7447936..7447953,7450065..7450094,7452875..7452890,7490482..7490517,7597880..7597943,7714916..7715021,8098755..8098868,8485263..8485429,8817483..8818020))
location: region:7162530-8818020:-1
so has part: feature:8817483-8818020:-1:exon
so has part: feature:8485263-8485429:-1:exon
so has part: feature:8098755-8098868:-1:exon
so has part: feature:7714916-7715021:-1:exon
so has part: feature:7597880-7597943:-1:exon
so has part: feature:7490482-7490517:-1:exon
so has part: feature:7452875-7452890:-1:exon
so has part: feature:7450065-7450094:-1:exon
so has part: feature:7447936-7447953:-1:exon
so has part: feature:7429510-7429538:-1:exon
so has part: feature:7421500-7421512:-1:exon
so has part: feature:7342839-7342869:-1:exon
so has part: feature:7342682-7342684:-1:exon
so has part: feature:7339154-7339219:-1:exon
so has part: feature:7289509-7289583:-1:exon
so has part: feature:7217999-7218095:-1:exon
so has part: feature:7193290-7193429:-1:exon
so has part: feature:7191708-7191797:-1:exon
so has part: feature:7180596-7180737:-1:exon
so has part: feature:7178927-7179090:-1:exon
so has part: feature:7169860-7169982:-1:exon
so has part: feature:7169716-7169778:-1:exon
so has part: feature:7168421-7168487:-1:exon
so has part: feature:7162530-7166949:-1:exon

position:8818020:-1
position: 8818020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8817483-8818020:-1:exon

position:8817483:-1
position: 8817483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8485263-8485429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8098755-8098868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7714916-7715021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7597880-7597943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7490482-7490517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7452875-7452890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7450065-7450094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7447936-7447953:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7429510-7429538:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7421500-7421512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7342839-7342869:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7342682-7342684:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7339154-7339219:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7289509-7289583:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7217999-7218095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7193290-7193429:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7191708-7191797:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7180596-7180737:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7178927-7179090:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7169860-7169982:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7169716-7169778:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7168421-7168487:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7162530-7166949:-1:exon

PRKG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PRKG1
product: protein kinase, cGMP-dependent, type I, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_019988617.1
SIO_010081: PRKG1
subclass of: SO_0000673
so part of: PRKG1
location: complement(join(7162530..7166949,7168421..7168487,7169716..7169778,7169860..7169982,7178927..7179090,7180596..7180737,7191708..7191797,7193290..7193429,7217999..7218095,7289509..7289583,7339154..7339219,7344056..7344290))
location: region:7162530-7344290:-1
so has part: feature:7344056-7344290:-1:exon
so has part: feature:7339154-7339219:-1:exon
so has part: feature:7289509-7289583:-1:exon
so has part: feature:7217999-7218095:-1:exon
so has part: feature:7193290-7193429:-1:exon
so has part: feature:7191708-7191797:-1:exon
so has part: feature:7180596-7180737:-1:exon
so has part: feature:7178927-7179090:-1:exon
so has part: feature:7169860-7169982:-1:exon
so has part: feature:7169716-7169778:-1:exon
so has part: feature:7168421-7168487:-1:exon
so has part: feature:7162530-7166949:-1:exon

position:7344290:-1
position: 7344290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7344056-7344290:-1:exon

position:7344056:-1
position: 7344056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7339154-7339219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7289509-7289583:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7217999-7218095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7193290-7193429:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7191708-7191797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7180596-7180737:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7178927-7179090:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7169860-7169982:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7169716-7169778:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7168421-7168487:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7162530-7166949:-1:exon

PRKG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PRKG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cGMP-dependent protein kinase 1 isoform X3
translation: MSELEEDFAKILMLKEERIKELEKRLSEKEEEIQELKRKLHKCQSVLPVPSTHIGPRTTRAQGISAEPQTYRSFHDLRQAFRKFTKSERSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKEGVKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEEFYLENKGKYILESWARGDTFSIIMKGKFNVTKSDIPHNPPILLITLGKSNWFIDLALQGEDVRTANVIAAEAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLKLSDFNIIDTLGVGGFGRVELVQLKSEESKTFAMKILKKRHIVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKKIGFGKKTWTFCGTPEYVAPEIILNKGHDISADYWSLGILMYELLTGSPPFSGPDPMKTYNIILRGIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWDIDF
SIO_010081: PRKG1
subclass of: SO_0000673
so part of: PRKG1
location: complement(join(7166851..7166949,7168421..7168487,7169716..7169778,7169860..7169982,7178927..7179090,7180596..7180737,7191708..7191797,7193290..7193429,7217999..7218095,7289509..7289583,7339154..7339219,7342682..7342684,7342839..7342869,7421500..7421512,7429510..7429538,7447936..7447953,7450065..7450094,7452875..7452890,7490482..7490517,7597880..7597943,7714916..7715021,8098755..8098868,8485263..8485429,8832525..8832790))
location: region:7166851-8832790:-1
so has part: feature:8832525-8832790:-1:exon
so has part: feature:8485263-8485429:-1:exon
so has part: feature:8098755-8098868:-1:exon
so has part: feature:7714916-7715021:-1:exon
so has part: feature:7597880-7597943:-1:exon
so has part: feature:7490482-7490517:-1:exon
so has part: feature:7452875-7452890:-1:exon
so has part: feature:7450065-7450094:-1:exon
so has part: feature:7447936-7447953:-1:exon
so has part: feature:7429510-7429538:-1:exon
so has part: feature:7421500-7421512:-1:exon
so has part: feature:7342839-7342869:-1:exon
so has part: feature:7342682-7342684:-1:exon
so has part: feature:7339154-7339219:-1:exon
so has part: feature:7289509-7289583:-1:exon
so has part: feature:7217999-7218095:-1:exon
so has part: feature:7193290-7193429:-1:exon
so has part: feature:7191708-7191797:-1:exon
so has part: feature:7180596-7180737:-1:exon
so has part: feature:7178927-7179090:-1:exon
so has part: feature:7169860-7169982:-1:exon
so has part: feature:7169716-7169778:-1:exon
so has part: feature:7168421-7168487:-1:exon
so has part: feature:7166851-7166949:-1:exon

XP_019844178.1
type: Protein
SIO_000068: ncbiprotein

position:7166851:-1
position: 7166851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8832790:-1
position: 8832790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8832525-8832790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8485263-8485429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8098755-8098868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7714916-7715021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7597880-7597943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7490482-7490517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7452875-7452890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7450065-7450094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7447936-7447953:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7429510-7429538:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7421500-7421512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7342839-7342869:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7342682-7342684:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7339154-7339219:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7289509-7289583:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7217999-7218095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7193290-7193429:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7191708-7191797:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7180596-7180737:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7178927-7179090:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7169860-7169982:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7169716-7169778:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7168421-7168487:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7166851-7166949:-1:exon

PRKG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PRKG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cGMP-dependent protein kinase 1 isoform X2
translation: MGTLRDLQYALQEKIEELRQRDALIDELELELDQKDELIQKLQNELDKYRSVIRPATQQAQKQSASTLQGEPRTKRQAISAEPTAFDIQDLSHVTLPFYPKSPQSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKEGVKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEEFYLENKGKYILESWARGDTFSIIMKGKFNVTKSDIPHNPPILLITLGKSNWFIDLALQGEDVRTANVIAAEAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLKLSDFNIIDTLGVGGFGRVELVQLKSEESKTFAMKILKKRHIVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKKIGFGKKTWTFCGTPEYVAPEIILNKGHDISADYWSLGILMYELLTGSPPFSGPDPMKTYNIILRGIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWDIDF
SIO_010081: PRKG1
subclass of: SO_0000673
so part of: PRKG1
location: complement(join(7166851..7166949,7168421..7168487,7169716..7169778,7169860..7169982,7178927..7179090,7180596..7180737,7191708..7191797,7193290..7193429,7217999..7218095,7289509..7289583,7339154..7339219,7342682..7342684,7342839..7342869,7421500..7421512,7429510..7429538,7447936..7447953,7450065..7450094,7452875..7452890,7490482..7490517,7597880..7597943,7714916..7715021,8098755..8098868,8485263..8485429,8817483..8817793))
location: region:7166851-8817793:-1
so has part: feature:8817483-8817793:-1:exon
so has part: feature:8485263-8485429:-1:exon
so has part: feature:8098755-8098868:-1:exon
so has part: feature:7714916-7715021:-1:exon
so has part: feature:7597880-7597943:-1:exon
so has part: feature:7490482-7490517:-1:exon
so has part: feature:7452875-7452890:-1:exon
so has part: feature:7450065-7450094:-1:exon
so has part: feature:7447936-7447953:-1:exon
so has part: feature:7429510-7429538:-1:exon
so has part: feature:7421500-7421512:-1:exon
so has part: feature:7342839-7342869:-1:exon
so has part: feature:7342682-7342684:-1:exon
so has part: feature:7339154-7339219:-1:exon
so has part: feature:7289509-7289583:-1:exon
so has part: feature:7217999-7218095:-1:exon
so has part: feature:7193290-7193429:-1:exon
so has part: feature:7191708-7191797:-1:exon
so has part: feature:7180596-7180737:-1:exon
so has part: feature:7178927-7179090:-1:exon
so has part: feature:7169860-7169982:-1:exon
so has part: feature:7169716-7169778:-1:exon
so has part: feature:7168421-7168487:-1:exon
so has part: feature:7166851-7166949:-1:exon

XP_019844177.1
type: Protein
SIO_000068: ncbiprotein

position:8817793:-1
position: 8817793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8817483-8817793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8485263-8485429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8098755-8098868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7714916-7715021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7597880-7597943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7490482-7490517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7452875-7452890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7450065-7450094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7447936-7447953:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7429510-7429538:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7421500-7421512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7342839-7342869:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7342682-7342684:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7339154-7339219:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7289509-7289583:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7217999-7218095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7193290-7193429:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7191708-7191797:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7180596-7180737:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7178927-7179090:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7169860-7169982:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7169716-7169778:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7168421-7168487:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7166851-7166949:-1:exon

PRKG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PRKG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cGMP-dependent protein kinase 1 isoform X1
translation: MDYSDTDGDSTLGYSDDEDSSDEVQRLSEEDVRTANVIAAEAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLKLSDFNIIDTLGVGGFGRVELVQLKSEESKTFAMKILKKRHIVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKKIGFGKKTWTFCGTPEYVAPEIILNKGHDISADYWSLGILMYELLTGSPPFSGPDPMKTYNIILRGIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWDIDF
SIO_010081: PRKG1
subclass of: SO_0000673
so part of: PRKG1
location: complement(join(7166851..7166949,7168421..7168487,7169716..7169778,7169860..7169982,7178927..7179090,7180596..7180737,7191708..7191797,7193290..7193429,7217999..7218095,7289509..7289583,7339154..7339219,7344056..7344141))
location: region:7166851-7344141:-1
so has part: feature:7344056-7344141:-1:exon
so has part: feature:7339154-7339219:-1:exon
so has part: feature:7289509-7289583:-1:exon
so has part: feature:7217999-7218095:-1:exon
so has part: feature:7193290-7193429:-1:exon
so has part: feature:7191708-7191797:-1:exon
so has part: feature:7180596-7180737:-1:exon
so has part: feature:7178927-7179090:-1:exon
so has part: feature:7169860-7169982:-1:exon
so has part: feature:7169716-7169778:-1:exon
so has part: feature:7168421-7168487:-1:exon
so has part: feature:7166851-7166949:-1:exon

XP_019844176.1
type: Protein
SIO_000068: ncbiprotein

position:7344141:-1
position: 7344141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7344056-7344141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7339154-7339219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7289509-7289583:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7217999-7218095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7193290-7193429:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7191708-7191797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7180596-7180737:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7178927-7179090:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7169860-7169982:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7169716-7169778:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7168421-7168487:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7166851-7166949:-1:exon

LOC109579119
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7392874..7475723
location: region:7392874-7475723:1
so has part: feature:7392874-7475723:1:exon
subclass of: SO_0000011

109579119
type: Gene
SIO_000068: ncbigene

position:7392874:1
position: 7392874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7475723:1
position: 7475723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7392874-7475723:1:exon

LOC109579119
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109579119
product: uncharacterized LOC109579119
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 146 samples with support for all annotated introns
transcript id: XR_002183780.1
SIO_010081: LOC109579119
subclass of: SO_0000673
so part of: LOC109579119
location: join(7392874..7392956,7409356..7409450,7475662..7475723)
location: region:7392874-7475723:1
so has part: feature:7392874-7392956:1:exon
so has part: feature:7409356-7409450:1:exon
so has part: feature:7475662-7475723:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7392874-7392956:1:exon

position:7392956:1
position: 7392956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7409356-7409450:1:exon

position:7409356:1
position: 7409356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7409450:1
position: 7409450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7475662-7475723:1:exon

position:7475662:1
position: 7475662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSTF2T
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CSTF2T
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7817592..7820035
location: region:7817592-7820035:1
so has part: feature:7817592-7820035:1:exon
subclass of: SO_0000010

109579116
type: Gene
SIO_000068: ncbigene

position:7817592:1
position: 7817592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7820035:1
position: 7820035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7817592-7820035:1:exon

CSTF2T
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CSTF2T
product: cleavage stimulation factor subunit 2 tau variant
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 51 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988616.1
SIO_010081: CSTF2T
subclass of: SO_0000673
so part of: CSTF2T
location: 7817592..7820035
location: region:7817592-7820035:1
so has part: feature:7817592-7820035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7817592-7820035:1:exon

CSTF2T
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CSTF2T
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 tau variant
translation: MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPIDPEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEIALKILHRKIHVTPLIPGKSQSVSGPGPGLCPGPNVLLNQQNPPAPQPQHLARRPVKDIPPLMQTPIQGGIPPQGPMPAAVPGPGPLTPGGTMQPQVGMPGVGPVPLERGQVQISDPRAPMPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHAAGHDSRGPSSHEMRGGPLADPRMLMSEPRGPMIDQRGLPMDGRGSRDSRGMETRAMETEVLETRVMERRGMETCAMETRAMEARGMDARGMEMRGPGPSSRGPMTGGIQGPGPINMGAGGPQGPRQVPSISGVGNPGPGMQGAGMQGGGMQGAGLQGAGMQGAGMQGGGMQGPGMQGAGMQGPGMQGAGMQGAGMQGAGMQGAGMQGAGMQGPGMQGAGKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGTS
SIO_010081: CSTF2T
subclass of: SO_0000673
so part of: CSTF2T
location: 7817672..7819600
location: region:7817672-7819600:1
so has part: feature:7817672-7819600:1:exon

XP_019844175.1
type: Protein
SIO_000068: ncbiprotein

position:7817672:1
position: 7817672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7819600:1
position: 7819600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7817672-7819600:1:exon

LOC109579118
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8256993..8257710
location: region:8256993-8257710:1
so has part: feature:8256993-8257710:1:exon
subclass of: SO_0000011

109579118
type: Gene
SIO_000068: ncbigene

position:8256993:1
position: 8256993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8257710:1
position: 8257710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8256993-8257710:1:exon

LOC109579118
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109579118
product: uncharacterized LOC109579118
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 274 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 264 samples with support for all annotated introns
transcript id: XR_002183779.1
SIO_010081: LOC109579118
subclass of: SO_0000673
so part of: LOC109579118
location: join(8256993..8257082,8257382..8257710)
location: region:8256993-8257710:1
so has part: feature:8256993-8257082:1:exon
so has part: feature:8257382-8257710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8256993-8257082:1:exon

position:8257082:1
position: 8257082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8257382-8257710:1:exon

position:8257382:1
position: 8257382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

A1CF
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: A1CF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8994378..9043299
location: region:8994378-9043299:1
so has part: feature:8994378-9043299:1:exon
subclass of: SO_0000010

109553200
type: Gene
SIO_000068: ncbigene

position:8994378:1
position: 8994378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9043299:1
position: 9043299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8994378-9043299:1:exon

A1CF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: A1CF
product: APOBEC1 complementation factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_019953183.1
SIO_010081: A1CF
subclass of: SO_0000673
so part of: A1CF
location: join(8994378..8994542,9010930..9011064,9012859..9012989,9017948..9018186,9024546..9024710,9031571..9031668,9040009..9040282,9042257..9043299)
location: region:8994378-9043299:1
so has part: feature:8994378-8994542:1:exon
so has part: feature:9010930-9011064:1:exon
so has part: feature:9012859-9012989:1:exon
so has part: feature:9017948-9018186:1:exon
so has part: feature:9024546-9024710:1:exon
so has part: feature:9031571-9031668:1:exon
so has part: feature:9040009-9040282:1:exon
so has part: feature:9042257-9043299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8994378-8994542:1:exon

position:8994542:1
position: 8994542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9010930-9011064:1:exon

position:9010930:1
position: 9010930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9011064:1
position: 9011064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9012859-9012989:1:exon

position:9012859:1
position: 9012859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9012989:1
position: 9012989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9017948-9018186:1:exon

position:9017948:1
position: 9017948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9018186:1
position: 9018186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9024546-9024710:1:exon

position:9024546:1
position: 9024546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9024710:1
position: 9024710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9031571-9031668:1:exon

position:9031571:1
position: 9031571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9031668:1
position: 9031668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9040009-9040282:1:exon

position:9040009:1
position: 9040009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9040282:1
position: 9040282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9042257-9043299:1:exon

position:9042257:1
position: 9042257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

A1CF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: A1CF
product: APOBEC1 complementation factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_019953184.1
SIO_010081: A1CF
subclass of: SO_0000673
so part of: A1CF
location: join(8994378..8994542,9010930..9011064,9012859..9012989,9017948..9018186,9024546..9024710,9031571..9031668,9040009..9040282,9042281..9043298)
location: region:8994378-9043298:1
so has part: feature:8994378-8994542:1:exon
so has part: feature:9010930-9011064:1:exon
so has part: feature:9012859-9012989:1:exon
so has part: feature:9017948-9018186:1:exon
so has part: feature:9024546-9024710:1:exon
so has part: feature:9031571-9031668:1:exon
so has part: feature:9040009-9040282:1:exon
so has part: feature:9042281-9043298:1:exon

position:9043298:1
position: 9043298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8994378-8994542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9010930-9011064:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9012859-9012989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9017948-9018186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9024546-9024710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9031571-9031668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9040009-9040282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9042281-9043298:1:exon

position:9042281:1
position: 9042281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

A1CF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: A1CF
product: APOBEC1 complementation factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019953185.1
SIO_010081: A1CF
subclass of: SO_0000673
so part of: A1CF
location: join(8994378..8994542,9010930..9011064,9012859..9012989,9017948..9018186,9024546..9024710,9031571..9031668,9040009..9040282,9041266..9042061)
location: region:8994378-9042061:1
so has part: feature:8994378-8994542:1:exon
so has part: feature:9010930-9011064:1:exon
so has part: feature:9012859-9012989:1:exon
so has part: feature:9017948-9018186:1:exon
so has part: feature:9024546-9024710:1:exon
so has part: feature:9031571-9031668:1:exon
so has part: feature:9040009-9040282:1:exon
so has part: feature:9041266-9042061:1:exon

position:9042061:1
position: 9042061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8994378-8994542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9010930-9011064:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9012859-9012989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9017948-9018186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9024546-9024710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9031571-9031668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9040009-9040282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9041266-9042061:1:exon

position:9041266:1
position: 9041266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

A1CF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: A1CF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: APOBEC1 complementation factor isoform X1
translation: MESNHKSGDGLSGTQKEAALRALVQRTGYSLVQENGQRKYGGPPPGWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAADKTKNRGFAFVEYENHRAAAMARRKLLPGRIQLWGHPIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFTNREDAVEAMKALNGKVLDGSPIEVTLAKPVDKDSYVRYTRGTGGRGAMLQGEYTYSLGHVYDPTTTYLGAPVFYAPQAYTAIPSLHFPTTKGHLGNRAIIRAPSVREIYMNVPVGAAGVRGLGGRGYLAYTGLGRGYQVKGDKREDKLYDLLPGMELTPMNPVTLKPQGIKLAPQVCSVIPEAAWIV
SIO_010081: A1CF
subclass of: SO_0000673
so part of: A1CF
location: join(8994444..8994542,9010930..9011064,9012859..9012989,9017948..9018186,9024546..9024710,9031571..9031668,9040009..9040282,9042257..9042501)
location: region:8994444-9042501:1
so has part: feature:8994444-8994542:1:exon
so has part: feature:9010930-9011064:1:exon
so has part: feature:9012859-9012989:1:exon
so has part: feature:9017948-9018186:1:exon
so has part: feature:9024546-9024710:1:exon
so has part: feature:9031571-9031668:1:exon
so has part: feature:9040009-9040282:1:exon
so has part: feature:9042257-9042501:1:exon

XP_019808742.1
type: Protein
SIO_000068: ncbiprotein

position:8994444:1
position: 8994444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9042501:1
position: 9042501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8994444-8994542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9010930-9011064:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9012859-9012989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9017948-9018186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9024546-9024710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9031571-9031668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9040009-9040282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9042257-9042501:1:exon

A1CF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: A1CF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: APOBEC1 complementation factor isoform X2
translation: MESNHKSGDGLSGTQKEAALRALVQRTGYSLVQENGQRKYGGPPPGWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAADKTKNRGFAFVEYENHRAAAMARRKLLPGRIQLWGHPIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFTNREDAVEAMKALNGKVLDGSPIEVTLAKPVDKDSYVRYTRGTGGRGAMLQGEYTYSLGHVYDPTTTYLGAPVFYAPQAYTAIPSLHFPTTKGHLGNRAIIRAPSVRGAAGVRGLGGRGYLAYTGLGRGYQVKGDKREDKLYDLLPGMELTPMNPVTLKPQGIKLAPQVCSVIPEAAWIV
SIO_010081: A1CF
subclass of: SO_0000673
so part of: A1CF
location: join(8994444..8994542,9010930..9011064,9012859..9012989,9017948..9018186,9024546..9024710,9031571..9031668,9040009..9040282,9042281..9042501)
location: region:8994444-9042501:1
so has part: feature:8994444-8994542:1:exon
so has part: feature:9010930-9011064:1:exon
so has part: feature:9012859-9012989:1:exon
so has part: feature:9017948-9018186:1:exon
so has part: feature:9024546-9024710:1:exon
so has part: feature:9031571-9031668:1:exon
so has part: feature:9040009-9040282:1:exon
so has part: feature:9042281-9042501:1:exon

XP_019808743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8994444-8994542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9010930-9011064:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9012859-9012989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9017948-9018186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9024546-9024710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9031571-9031668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9040009-9040282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9042281-9042501:1:exon

A1CF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: A1CF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: APOBEC1 complementation factor isoform X3
translation: MESNHKSGDGLSGTQKEAALRALVQRTGYSLVQENGQRKYGGPPPGWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAADKTKNRGFAFVEYENHRAAAMARRKLLPGRIQLWGHPIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFTNREDAVEAMKALNGKVLDGSPIEVTLAKPVDKDSYVRYTRGTGGRGAMLQGEYTYSLGHVYDPTTTYLGAPVFYAPQAYTAIPSLHFPTTKGHLGNRAIIRAPSVRGELNWPS
SIO_010081: A1CF
subclass of: SO_0000673
so part of: A1CF
location: join(8994444..8994542,9010930..9011064,9012859..9012989,9017948..9018186,9024546..9024710,9031571..9031668,9040009..9040282,9041266..9041288)
location: region:8994444-9041288:1
so has part: feature:8994444-8994542:1:exon
so has part: feature:9010930-9011064:1:exon
so has part: feature:9012859-9012989:1:exon
so has part: feature:9017948-9018186:1:exon
so has part: feature:9024546-9024710:1:exon
so has part: feature:9031571-9031668:1:exon
so has part: feature:9040009-9040282:1:exon
so has part: feature:9041266-9041288:1:exon

XP_019808744.1
type: Protein
SIO_000068: ncbiprotein

position:9041288:1
position: 9041288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8994444-8994542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9010930-9011064:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9012859-9012989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9017948-9018186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9024546-9024710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9031571-9031668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9040009-9040282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9041266-9041288:1:exon

LOC109553156
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109553156
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9124869..9130859
location: region:9124869-9130859:1
so has part: feature:9124869-9130859:1:exon
subclass of: SO_0000010

109553156
type: Gene
SIO_000068: ncbigene

position:9124869:1
position: 9124869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9130859:1
position: 9130859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9124869-9130859:1:exon

LOC109553156
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109553156
product: phosphatidylcholine:ceramide cholinephosphotransferase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 260 samples with support for all annotated introns
transcript id: XM_019953113.1
SIO_010081: LOC109553156
subclass of: SO_0000673
so part of: LOC109553156
location: join(9124869..9125050,9128683..9128849,9129524..9130859)
location: region:9124869-9130859:1
so has part: feature:9124869-9125050:1:exon
so has part: feature:9128683-9128849:1:exon
so has part: feature:9129524-9130859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9124869-9125050:1:exon

position:9125050:1
position: 9125050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9128683-9128849:1:exon

position:9128683:1
position: 9128683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9128849:1
position: 9128849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9129524-9130859:1:exon

position:9129524:1
position: 9129524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109553156
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109553156
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1-like
translation: MKLIAGGGLSITGSHNMCGDYLYSGHTVMLTLTYLFIKEYSPRRLWWYHWLCWLLSVVGIFCILLAHDHYTVDVVVAYYITTRLFWWYHTMANQQVLKEASQMNLLARVWWYRPFQYFEKNVQGIVPRSYHWPFPWPVIHLSRQVKYSRLVNDT
SIO_010081: LOC109553156
subclass of: SO_0000673
so part of: LOC109553156
location: join(9124933..9125050,9128683..9128849,9129524..9129703)
location: region:9124933-9129703:1
so has part: feature:9124933-9125050:1:exon
so has part: feature:9128683-9128849:1:exon
so has part: feature:9129524-9129703:1:exon

XP_019808672.1
type: Protein
SIO_000068: ncbiprotein

position:9124933:1
position: 9124933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9129703:1
position: 9129703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9124933-9125050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9128683-9128849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9129524-9129703:1:exon

ASAH2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ASAH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9172097..9218004
location: region:9172097-9218004:1
so has part: feature:9172097-9218004:1:exon
subclass of: SO_0000010

109578966
type: Gene
SIO_000068: ncbigene

position:9172097:1
position: 9172097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9218004:1
position: 9218004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9172097-9218004:1:exon

ASAH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ASAH2
product: N-acylsphingosine amidohydrolase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988423.1
SIO_010081: ASAH2
subclass of: SO_0000673
so part of: ASAH2
location: join(9172097..9172279,9175293..9175458,9179181..9179398,9181095..9181244,9187880..9188056,9188324..9188451,9189567..9189644,9204626..9204746,9206550..9206675,9208449..9208535,9210978..9211082,9211199..9211280,9213789..9213904,9214901..9214995,9217956..9218004)
location: region:9172097-9218004:1
so has part: feature:9172097-9172279:1:exon
so has part: feature:9175293-9175458:1:exon
so has part: feature:9179181-9179398:1:exon
so has part: feature:9181095-9181244:1:exon
so has part: feature:9187880-9188056:1:exon
so has part: feature:9188324-9188451:1:exon
so has part: feature:9189567-9189644:1:exon
so has part: feature:9204626-9204746:1:exon
so has part: feature:9206550-9206675:1:exon
so has part: feature:9208449-9208535:1:exon
so has part: feature:9210978-9211082:1:exon
so has part: feature:9211199-9211280:1:exon
so has part: feature:9213789-9213904:1:exon
so has part: feature:9214901-9214995:1:exon
so has part: feature:9217956-9218004:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9172097-9172279:1:exon

position:9172279:1
position: 9172279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9175293-9175458:1:exon

position:9175293:1
position: 9175293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9175458:1
position: 9175458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9179181-9179398:1:exon

position:9179181:1
position: 9179181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9179398:1
position: 9179398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9181095-9181244:1:exon

position:9181095:1
position: 9181095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9181244:1
position: 9181244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9187880-9188056:1:exon

position:9187880:1
position: 9187880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9188056:1
position: 9188056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9188324-9188451:1:exon

position:9188324:1
position: 9188324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9188451:1
position: 9188451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9189567-9189644:1:exon

position:9189567:1
position: 9189567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9189644:1
position: 9189644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9204626-9204746:1:exon

position:9204626:1
position: 9204626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9204746:1
position: 9204746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9206550-9206675:1:exon

position:9206550:1
position: 9206550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9206675:1
position: 9206675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9208449-9208535:1:exon

position:9208449:1
position: 9208449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9208535:1
position: 9208535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9210978-9211082:1:exon

position:9210978:1
position: 9210978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9211082:1
position: 9211082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9211199-9211280:1:exon

position:9211199:1
position: 9211199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9211280:1
position: 9211280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9213789-9213904:1:exon

position:9213789:1
position: 9213789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9213904:1
position: 9213904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9214901-9214995:1:exon

position:9214901:1
position: 9214901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9214995:1
position: 9214995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9217956-9218004:1:exon

position:9217956:1
position: 9217956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASAH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ASAH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutral ceramidase
translation: MAKRTFSSFEIFLIFLLVXTTGITVALLSLLFITSGTIENHTGKYRFPSTQGPPATQSPPATQGSAAPQNSTPSRGPTTTXASPTPSTPEPTLFQNFSGYHIGVGRADCTGQVSDINLMGYAKTGQYARGILTRLYSRAFIMAEPDGSNRIVFVSIDIGMVSQRLRLEVLSRLQNKYGSLYRRDNVILSGTHTHSGPAGYFQYTTFVIASEGFSNRTFEYMVTGIVESIEIAHKNMKPGKIFINKGTVDGAQINRSPTSYLWNPQSERARYSSNTDKEMVLLKMVDLNGEELGLISWFAIHPVSMKNTNHLVNSDNVGYASYLFEQEKNKGYLPGEGPYVAAFASSNLGDVSPNVLGPQCTNTGESCDNANSSCPIGGPSMCVAMGPGQDMFESTQIIGRIIYDKAKELYESASQEVTGPLASAHQWVNMTDVTVWLNSTHTVKTCKPALGYSFAAGTIDGFGTVSFTQGMTEGDSFWDTLRDQVLGKPSEEIKECHKPKPVLLQTGELLNPHPWHPDIVDVQIVTLGFLAITAIPGEFTTMSGRRLRQAVREVS
SIO_010081: ASAH2
subclass of: SO_0000673
so part of: ASAH2
location: join(9175323..9175458,9179181..9179398,9181095..9181244,9187880..9188056,9188324..9188451,9189567..9189644,9204626..9204746,9206550..9206675,9208449..9208535,9210978..9211082,9211199..9211280,9213789..9213904,9214901..9214995,9217956..9218004)
location: region:9175323-9218004:1
so has part: feature:9175323-9175458:1:exon
so has part: feature:9179181-9179398:1:exon
so has part: feature:9181095-9181244:1:exon
so has part: feature:9187880-9188056:1:exon
so has part: feature:9188324-9188451:1:exon
so has part: feature:9189567-9189644:1:exon
so has part: feature:9204626-9204746:1:exon
so has part: feature:9206550-9206675:1:exon
so has part: feature:9208449-9208535:1:exon
so has part: feature:9210978-9211082:1:exon
so has part: feature:9211199-9211280:1:exon
so has part: feature:9213789-9213904:1:exon
so has part: feature:9214901-9214995:1:exon
so has part: feature:9217956-9218004:1:exon

XP_019843982.1
type: Protein
SIO_000068: ncbiprotein

position:9175323:1
position: 9175323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9175323-9175458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9179181-9179398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9181095-9181244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9187880-9188056:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9188324-9188451:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9189567-9189644:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9204626-9204746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9206550-9206675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9208449-9208535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9210978-9211082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9211199-9211280:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9213789-9213904:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9214901-9214995:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9217956-9218004:1:exon

SGMS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9233013..9558083)
location: region:9233013-9558083:-1
so has part: feature:9233013-9558083:-1:exon
subclass of: SO_0000010

109579164
type: Gene
SIO_000068: ncbigene

position:9233013:-1
position: 9233013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9558083:-1
position: 9558083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9233013-9558083:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 45 ESTs, 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988720.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9233013..9234744,9235419..9235585,9239218..9239371,9257228..9257345,9273726..9274399))
location: region:9233013-9274399:-1
so has part: feature:9273726-9274399:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9239218-9239371:-1:exon
so has part: feature:9235419-9235585:-1:exon
so has part: feature:9233013-9234744:-1:exon

position:9274399:-1
position: 9274399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274399:-1:exon

position:9273726:-1
position: 9273726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

position:9257228:-1
position: 9257228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9257345:-1
position: 9257345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9239218-9239371:-1:exon

position:9239218:-1
position: 9239218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9239371:-1
position: 9239371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9235419-9235585:-1:exon

position:9235419:-1
position: 9235419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9235585:-1
position: 9235585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9233013-9234744:-1:exon

position:9234744:-1
position: 9234744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X2
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKEYSPRRLWWYHWLCWLLSVVGIFCILLAHDHYTVDVVVAYYITTRLFWWYHTMANQQVLKEASQMNLLARVWWYRPFQYFEKNVQGIVPRSYHWPFPWPVIHLSRQVKYSRLVNDT
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9234565..9234744,9235419..9235585,9239218..9239371,9257228..9257345,9273726..9274348))
location: region:9234565-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9239218-9239371:-1:exon
so has part: feature:9235419-9235585:-1:exon
so has part: feature:9234565-9234744:-1:exon

XP_019844279.1
type: Protein
SIO_000068: ncbiprotein

position:9234565:-1
position: 9234565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9274348:-1
position: 9274348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9239218-9239371:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9235419-9235585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9234565-9234744:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 164 samples with support for all annotated introns
transcript id: XM_019988702.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9354661..9354741,9393632..9393775,9399866..9399901,9460900..9460988,9522964..9523058,9557989..9558083))
location: region:9238818-9558083:-1
so has part: feature:9557989-9558083:-1:exon
so has part: feature:9522964-9523058:-1:exon
so has part: feature:9460900-9460988:-1:exon
so has part: feature:9399866-9399901:-1:exon
so has part: feature:9393632-9393775:-1:exon
so has part: feature:9354661-9354741:-1:exon
so has part: feature:9273726-9274577:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238818-9239371:-1:exon

position:9238818:-1
position: 9238818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9557989-9558083:-1:exon

position:9557989:-1
position: 9557989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9522964-9523058:-1:exon

position:9522964:-1
position: 9522964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9523058:-1
position: 9523058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9460900-9460988:-1:exon

position:9460900:-1
position: 9460900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9460988:-1
position: 9460988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9399866-9399901:-1:exon

position:9399866:-1
position: 9399866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9399901:-1
position: 9399901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9393632-9393775:-1:exon

position:9393632:-1
position: 9393632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9393775:-1
position: 9393775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9354661-9354741:-1:exon

position:9354661:-1
position: 9354661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9354741:-1
position: 9354741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9273726-9274577:-1:exon

position:9274577:-1
position: 9274577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_019988707.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9354661..9354741,9393632..9393775,9460900..9460988,9522964..9523058,9557895..9558083))
location: region:9238818-9558083:-1
so has part: feature:9557895-9558083:-1:exon
so has part: feature:9522964-9523058:-1:exon
so has part: feature:9460900-9460988:-1:exon
so has part: feature:9393632-9393775:-1:exon
so has part: feature:9354661-9354741:-1:exon
so has part: feature:9273726-9274577:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238818-9239371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9557895-9558083:-1:exon

position:9557895:-1
position: 9557895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9522964-9523058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9460900-9460988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9393632-9393775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9354661-9354741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9273726-9274577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 149 samples with support for all annotated introns
transcript id: XM_019988698.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9354661..9354741,9393632..9393775,9399866..9399901,9460900..9460988,9522964..9523058,9557895..9558083))
location: region:9238818-9558083:-1
so has part: feature:9557895-9558083:-1:exon
so has part: feature:9522964-9523058:-1:exon
so has part: feature:9460900-9460988:-1:exon
so has part: feature:9399866-9399901:-1:exon
so has part: feature:9393632-9393775:-1:exon
so has part: feature:9354661-9354741:-1:exon
so has part: feature:9273726-9274577:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238818-9239371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9557895-9558083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9522964-9523058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9460900-9460988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9399866-9399901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9393632-9393775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9354661-9354741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9273726-9274577:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_019988697.1
SIO_010081: SGMS1
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so part of: SGMS1
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
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SIO_000300: 10
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SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019988699.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9354661..9354741,9393632..9393775,9399866..9399901,9460900..9460988,9522964..9523058,9541828..9541961,9557895..9558083))
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urn:…
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urn:…
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urn:…
SIO_000300: 10
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019988706.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 10
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_019988709.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9354661..9354741,9399866..9399901,9460900..9460988,9522964..9523058,9535524..9535673,9541828..9541961,9557895..9558083))
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urn:…
SIO_000300: 1
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SIO_000300: 10
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019988708.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9393632..9393775,9399866..9399901,9460900..9460988,9522964..9523058,9535524..9535673,9541828..9541961,9557895..9558083))
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urn:…
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SIO_000300: 10
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SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019988696.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
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urn:…
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SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019988700.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
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urn:…
SIO_000300: 1
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SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019988701.1
SIO_010081: SGMS1
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urn:…
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SIO_000300: 10
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urn:…
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SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_019988704.1
SIO_010081: SGMS1
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urn:…
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SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_019988705.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9354661..9354741,9393632..9393775,9399866..9399901,9460900..9460988,9522964..9523058,9525585..9526444))
location: region:9238818-9526444:-1
so has part: feature:9525585-9526444:-1:exon
so has part: feature:9522964-9523058:-1:exon
so has part: feature:9460900-9460988:-1:exon
so has part: feature:9399866-9399901:-1:exon
so has part: feature:9393632-9393775:-1:exon
so has part: feature:9354661-9354741:-1:exon
so has part: feature:9273726-9274577:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238818-9239371:-1:exon

position:9526444:-1
position: 9526444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9525585-9526444:-1:exon

position:9525585:-1
position: 9525585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9522964-9523058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9460900-9460988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9399866-9399901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9393632-9393775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9354661-9354741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9273726-9274577:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_019988713.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9354661..9354741,9399866..9399901,9448353..9448482))
location: region:9238818-9448482:-1
so has part: feature:9448353-9448482:-1:exon
so has part: feature:9399866-9399901:-1:exon
so has part: feature:9354661-9354741:-1:exon
so has part: feature:9273726-9274577:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238818-9239371:-1:exon

position:9448482:-1
position: 9448482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9448353-9448482:-1:exon

position:9448353:-1
position: 9448353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9399866-9399901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9354661-9354741:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9273726-9274577:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_019988711.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9354661..9354741,9393632..9393775,9399866..9399901,9448353..9448482))
location: region:9238818-9448482:-1
so has part: feature:9448353-9448482:-1:exon
so has part: feature:9399866-9399901:-1:exon
so has part: feature:9393632-9393775:-1:exon
so has part: feature:9354661-9354741:-1:exon
so has part: feature:9273726-9274577:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238818-9239371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9448353-9448482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9399866-9399901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9393632-9393775:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9354661-9354741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9273726-9274577:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019988712.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9354661..9354741,9399866..9399901,9440292..9440371))
location: region:9238818-9440371:-1
so has part: feature:9440292-9440371:-1:exon
so has part: feature:9399866-9399901:-1:exon
so has part: feature:9354661-9354741:-1:exon
so has part: feature:9273726-9274577:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238818-9239371:-1:exon

position:9440371:-1
position: 9440371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9440292-9440371:-1:exon

position:9440292:-1
position: 9440292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9399866-9399901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9354661-9354741:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9273726-9274577:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_019988710.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9354661..9354741,9393632..9393775,9399866..9399901,9440292..9440371))
location: region:9238818-9440371:-1
so has part: feature:9440292-9440371:-1:exon
so has part: feature:9399866-9399901:-1:exon
so has part: feature:9393632-9393775:-1:exon
so has part: feature:9354661-9354741:-1:exon
so has part: feature:9273726-9274577:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238818-9239371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9440292-9440371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9399866-9399901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9393632-9393775:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9354661-9354741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9273726-9274577:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 141 samples with support for all annotated introns
transcript id: XM_019988717.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9339657..9339719))
location: region:9238818-9339719:-1
so has part: feature:9339657-9339719:-1:exon
so has part: feature:9273726-9274577:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238818-9239371:-1:exon

position:9339719:-1
position: 9339719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9339657-9339719:-1:exon

position:9339657:-1
position: 9339657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9273726-9274577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_019988718.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9331905..9331997))
location: region:9238818-9331997:-1
so has part: feature:9331905-9331997:-1:exon
so has part: feature:9273726-9274577:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238818-9239371:-1:exon

position:9331997:-1
position: 9331997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9331905-9331997:-1:exon

position:9331905:-1
position: 9331905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9273726-9274577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_019988716.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9328761..9328856,9331905..9331994))
location: region:9238818-9331994:-1
so has part: feature:9331905-9331994:-1:exon
so has part: feature:9328761-9328856:-1:exon
so has part: feature:9273726-9274577:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238818-9239371:-1:exon

position:9331994:-1
position: 9331994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9331905-9331994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9328761-9328856:-1:exon

position:9328761:-1
position: 9328761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9328856:-1
position: 9328856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9273726-9274577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_019988715.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9328761..9330183))
location: region:9238818-9330183:-1
so has part: feature:9328761-9330183:-1:exon
so has part: feature:9273726-9274577:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238818-9239371:-1:exon

position:9330183:-1
position: 9330183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9328761-9330183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9273726-9274577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SGMS1
product: sphingomyelin synthase 1, transcript variant X22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_019988719.1
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238818..9239371,9257228..9257345,9273726..9274577,9286698..9286704,9289690..9289699))
location: region:9238818-9289699:-1
so has part: feature:9289690-9289699:-1:exon
so has part: feature:9286698-9286704:-1:exon
so has part: feature:9273726-9274577:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238818-9239371:-1:exon

position:9289699:-1
position: 9289699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9289690-9289699:-1:exon

position:9289690:-1
position: 9289690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9286698-9286704:-1:exon

position:9286698:-1
position: 9286698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9286704:-1
position: 9286704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9273726-9274577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9238818-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844255.1
type: Protein
SIO_000068: ncbiprotein

position:9238832:-1
position: 9238832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

SGMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SGMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1
translation: MKEVVYWSPEKVADWLQENAMPEYCEPLEHFTGRDLINLTQEDFTKPPLCLVTSDNGQRLLHMIETLKMEHHLEAHKNGHANGHLSIGTGSPSPNGSFSIKVKPNGMPNGYRKEMIKIPMPEPERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDHFNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLPVPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGXXLYSGHTVMLTLTYLFIKECKSRATSRENLLTCRSPREQGGIWGGQPLVSRACSQAPREIYVTGACTSWERCLVSLAVSCGIRVFYDCWKEPEGRRQNSRPGWMMVDVVFTWQPFFRHGHCLICSKEVRGGWRCLFPQTGSGLRGAK
SIO_010081: SGMS1
subclass of: SO_0000673
so part of: SGMS1
location: complement(join(9238832..9239371,9257228..9257345,9273726..9274348))
location: region:9238832-9274348:-1
so has part: feature:9273726-9274348:-1:exon
so has part: feature:9257228-9257345:-1:exon
so has part: feature:9238832-9239371:-1:exon

XP_019844278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9273726-9274348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9257228-9257345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9238832-9239371:-1:exon

LOC109578967
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9651838..9655694
location: region:9651838-9655694:1
so has part: feature:9651838-9655694:1:exon

109578967
type: Gene
SIO_000068: ncbigene

position:9651838:1
position: 9651838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9655694:1
position: 9655694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9651838-9655694:1:exon

LOC109578967
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578967
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578967
subclass of: SO_0000673
so part of: LOC109578967
location: 9651838..9651843
location: region:9651838-9651843:1
so has part: feature:9651838-9651843:1:exon

position:9651843:1
position: 9651843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9651838-9651843:1:exon

LOC109578967
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578967
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578967
subclass of: SO_0000673
so part of: LOC109578967
location: 9652658..9653975
location: region:9652658-9653975:1
so has part: feature:9652658-9653975:1:exon

position:9652658:1
position: 9652658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9653975:1
position: 9653975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9652658-9653975:1:exon

LOC109578967
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578967
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578967
subclass of: SO_0000673
so part of: LOC109578967
location: 9654097..9654137
location: region:9654097-9654137:1
so has part: feature:9654097-9654137:1:exon

position:9654097:1
position: 9654097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9654137:1
position: 9654137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9654097-9654137:1:exon

LOC109578967
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578967
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578967
subclass of: SO_0000673
so part of: LOC109578967
location: 9654286..9654445
location: region:9654286-9654445:1
so has part: feature:9654286-9654445:1:exon

position:9654286:1
position: 9654286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9654445:1
position: 9654445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9654286-9654445:1:exon

LOC109578967
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578967
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578967
subclass of: SO_0000673
so part of: LOC109578967
location: 9655653..9655694
location: region:9655653-9655694:1
so has part: feature:9655653-9655694:1:exon

position:9655653:1
position: 9655653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9655653-9655694:1:exon

MINPP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: MINPP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9670449..9710589
location: region:9670449-9710589:1
so has part: feature:9670449-9710589:1:exon
subclass of: SO_0000010

109553098
type: Gene
SIO_000068: ncbigene

position:9670449:1
position: 9670449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9710589:1
position: 9710589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9670449-9710589:1:exon

MINPP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MINPP1
product: multiple inositol-polyphosphate phosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019953015.1
SIO_010081: MINPP1
subclass of: SO_0000673
so part of: MINPP1
location: join(9670449..9671144,9674061..9674258,9706214..9706317)
location: region:9670449-9706317:1
so has part: feature:9670449-9671144:1:exon
so has part: feature:9674061-9674258:1:exon
so has part: feature:9706214-9706317:1:exon

position:9706317:1
position: 9706317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9670449-9671144:1:exon

position:9671144:1
position: 9671144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9674061-9674258:1:exon

position:9674061:1
position: 9674061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9674258:1
position: 9674258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9706214-9706317:1:exon

position:9706214:1
position: 9706214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MINPP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MINPP1
product: multiple inositol-polyphosphate phosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 43 ESTs, 5 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 171 samples with support for all annotated introns
transcript id: XM_019953014.1
SIO_010081: MINPP1
subclass of: SO_0000673
so part of: MINPP1
location: join(9670456..9671144,9674061..9674258,9677913..9678010,9685856..9685989,9706214..9710589)
location: region:9670456-9710589:1
so has part: feature:9670456-9671144:1:exon
so has part: feature:9674061-9674258:1:exon
so has part: feature:9677913-9678010:1:exon
so has part: feature:9685856-9685989:1:exon
so has part: feature:9706214-9710589:1:exon

position:9670456:1
position: 9670456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9670456-9671144:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9674061-9674258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9677913-9678010:1:exon

position:9677913:1
position: 9677913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9678010:1
position: 9678010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9685856-9685989:1:exon

position:9685856:1
position: 9685856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9685989:1
position: 9685989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9706214-9710589:1:exon

MINPP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MINPP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multiple inositol polyphosphate phosphatase 1 isoform X1
translation: MPRGPCSLVRVSATPVAVLAVALVSSLSRCSLLEPENSVVSALSPYFGTKTRYEDANPGLLPDPEVPRRDPELLEETCTPVQLVALIRHGTRYPTTKQIRKLRQLHGLLQARGAEDXXXRAAGRGNLGAALADWPLWYADWMDGQLVEKGRQDMRQLALRLASLFPALFSRENYGRLQLVTSSKHRCVDSGAAFLQGLWQHYHPGLPPPDIADMECGPPRINDKLMRFFDHCEKFLTQVERNATALYHVEAFKTGPEMQNILKKVADILQVPVNNLNADLIQVAFFTCSFDLAIKGVKSPWCDVFDIDDAKVLEYLNDLKQYWKRGYGYSINSRSSCTLFQDIFQHLDKAVKQKQRSQPVSSPVILQFGHAETLLPLLSLMGYFKDKEPLTAYNYKEQMHRKFRSGHIVPYASNLIFVLYHCKNAKTPKEEFRVQMLLNEKVLPLAHSQETVSLYEDLKNHYKDILQSCHTSEECELPKVNTSDEL
SIO_010081: MINPP1
subclass of: SO_0000673
so part of: MINPP1
location: join(9670508..9671144,9674061..9674258,9677913..9678010,9685856..9685989,9706214..9706607)
location: region:9670508-9706607:1
so has part: feature:9670508-9671144:1:exon
so has part: feature:9674061-9674258:1:exon
so has part: feature:9677913-9678010:1:exon
so has part: feature:9685856-9685989:1:exon
so has part: feature:9706214-9706607:1:exon

XP_019808573.1
type: Protein
SIO_000068: ncbiprotein

position:9670508:1
position: 9670508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9706607:1
position: 9706607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9670508-9671144:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9674061-9674258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9677913-9678010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9685856-9685989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9706214-9706607:1:exon

MINPP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MINPP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multiple inositol polyphosphate phosphatase 1 isoform X2
translation: MPRGPCSLVRVSATPVAVLAVALVSSLSRCSLLEPENSVVSALSPYFGTKTRYEDANPGLLPDPEVPRRDPELLEETCTPVQLVALIRHGTRYPTTKQIRKLRQLHGLLQARGAEDXXXRAAGRGNLGAALADWPLWYADWMDGQLVEKGRQDMRQLALRLASLFPALFSRENYGRLQLVTSSKHRCVDSGAAFLQGLWQHYHPGLPPPDIADMECGPPRINDKLMRFFDHCEKFLTQVERNATALYHVEAFKTGPEMQNILKKVADILQVPVNNLNAVLNQFPLQSSSSLAMQRPFFHCFLSWATSKTRNP
SIO_010081: MINPP1
subclass of: SO_0000673
so part of: MINPP1
location: join(9670508..9671144,9674061..9674258,9706214..9706317)
location: region:9670508-9706317:1
so has part: feature:9670508-9671144:1:exon
so has part: feature:9674061-9674258:1:exon
so has part: feature:9706214-9706317:1:exon

XP_019808574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9670508-9671144:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9674061-9674258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9706214-9706317:1:exon

PAPSS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PAPSS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9844971..9893833
location: region:9844971-9893833:1
so has part: feature:9844971-9893833:1:exon
subclass of: SO_0000010

109578968
type: Gene
SIO_000068: ncbigene

position:9844971:1
position: 9844971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9893833:1
position: 9893833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9844971-9893833:1:exon

PAPSS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PAPSS2
product: 3'-phosphoadenosine 5'-phosphosulfate synthase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 72 ESTs, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988424.1
SIO_010081: PAPSS2
subclass of: SO_0000673
so part of: PAPSS2
location: join(9844971..9845192,9846340..9846415,9854517..9854752,9857089..9857227,9857755..9857873,9858000..9858113,9860024..9860135,9863296..9863310,9867136..9867341,9878197..9878332,9889556..9889824,9891243..9891472,9892015..9893833)
location: region:9844971-9893833:1
so has part: feature:9844971-9845192:1:exon
so has part: feature:9846340-9846415:1:exon
so has part: feature:9854517-9854752:1:exon
so has part: feature:9857089-9857227:1:exon
so has part: feature:9857755-9857873:1:exon
so has part: feature:9858000-9858113:1:exon
so has part: feature:9860024-9860135:1:exon
so has part: feature:9863296-9863310:1:exon
so has part: feature:9867136-9867341:1:exon
so has part: feature:9878197-9878332:1:exon
so has part: feature:9889556-9889824:1:exon
so has part: feature:9891243-9891472:1:exon
so has part: feature:9892015-9893833:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9844971-9845192:1:exon

position:9845192:1
position: 9845192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9846340-9846415:1:exon

position:9846340:1
position: 9846340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9846415:1
position: 9846415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9854517-9854752:1:exon

position:9854517:1
position: 9854517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9854752:1
position: 9854752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9857089-9857227:1:exon

position:9857089:1
position: 9857089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9857227:1
position: 9857227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9857755-9857873:1:exon

position:9857755:1
position: 9857755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9857873:1
position: 9857873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9858000-9858113:1:exon

position:9858000:1
position: 9858000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9858113:1
position: 9858113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9860024-9860135:1:exon

position:9860024:1
position: 9860024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9860135:1
position: 9860135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9863296-9863310:1:exon

position:9863296:1
position: 9863296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9863310:1
position: 9863310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9867136-9867341:1:exon

position:9867136:1
position: 9867136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9867341:1
position: 9867341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9878197-9878332:1:exon

position:9878197:1
position: 9878197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9878332:1
position: 9878332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9889556-9889824:1:exon

position:9889556:1
position: 9889556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9889824:1
position: 9889824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9891243-9891472:1:exon

position:9891243:1
position: 9891243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9891472:1
position: 9891472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9892015-9893833:1:exon

position:9892015:1
position: 9892015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAPSS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PAPSS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2
translation: MEPKTIYHPYSEYQESXEIAFSQAQGLWLRSTDTWWESSSSLVAVQSTGTVYEVRYDSDKGERKRXSLGLKGVKCLEIQAGPLSVFIEPGAPITANEVISLSGAGKTTISFALEEYLVSHAIPCYSLDGDNIRQGLNKNLGFSTWDREENIRRIAEVAKLFADAGLVCITSFISPFAKDRENARKIHESSGLPFFEIFVDAPLNICERRDVKGLYKRARAGEIKGFTGIDSDYEKPESPELVLKTNLSSVSDCMQQVVELLQEQNIVPHTVIKGIHELFVPENKLDQVRAEAEALPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVVHFGTLIDGMFLPDGVINMSIPIVLPISADDKTRLEGCSKFVLTHGGRRVAILEDPEFYEHRKEERCSHVWGTTCAKHPYIKMVMESGDWLVGGDLQVLERIQWNDGLDQYRLTPLELKQKCKEMDADAVFAFQLRNPVHNGHALLMQDTRRRLLERGYKHPVLLLHPLGGWTKDDDVPLDWRMKQHAAVLEEEVLDPKSTIVAIFPSPMLYAGPTEVQWHCRARMVAGANFYIVGRDPAGMPHPETKRDLYEPTHGGKVLTMAPGLTSVEIIPFRVAAYNKAKKAMDFYDPERHDEFDFISGTRMRKLAREGENPPDGFMAPKAWKVLTDYYASLEKNN
SIO_010081: PAPSS2
subclass of: SO_0000673
so part of: PAPSS2
location: join(9844971..9845192,9846340..9846415,9854517..9854752,9857089..9857227,9857755..9857873,9858000..9858113,9860024..9860135,9863296..9863310,9867136..9867341,9878197..9878332,9889556..9889824,9891243..9891472,9892015..9892156)
location: region:9844971-9892156:1
so has part: feature:9844971-9845192:1:exon
so has part: feature:9846340-9846415:1:exon
so has part: feature:9854517-9854752:1:exon
so has part: feature:9857089-9857227:1:exon
so has part: feature:9857755-9857873:1:exon
so has part: feature:9858000-9858113:1:exon
so has part: feature:9860024-9860135:1:exon
so has part: feature:9863296-9863310:1:exon
so has part: feature:9867136-9867341:1:exon
so has part: feature:9878197-9878332:1:exon
so has part: feature:9889556-9889824:1:exon
so has part: feature:9891243-9891472:1:exon
so has part: feature:9892015-9892156:1:exon

XP_019843983.1
type: Protein
SIO_000068: ncbiprotein

position:9892156:1
position: 9892156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9844971-9845192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9846340-9846415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9854517-9854752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9857089-9857227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9857755-9857873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9858000-9858113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9860024-9860135:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9863296-9863310:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9867136-9867341:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9878197-9878332:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9889556-9889824:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9891243-9891472:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9892015-9892156:1:exon

ATAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ATAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9901279..9941827)
location: region:9901279-9941827:-1
so has part: feature:9901279-9941827:-1:exon
subclass of: SO_0000010

109553006
type: Gene
SIO_000068: ncbigene

position:9901279:-1
position: 9901279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9941827:-1
position: 9941827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9901279-9941827:-1:exon

ATAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ATAD1
product: ATPase family, AAA domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 56 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 260 samples with support for all annotated introns
transcript id: XM_019952806.1
SIO_010081: ATAD1
subclass of: SO_0000673
so part of: ATAD1
location: complement(join(9901279..9902926,9904605..9904738,9910034..9910084,9913187..9913276,9919009..9919115,9923705..9923905,9925738..9925858,9927675..9927773,9938328..9938502,9941740..9941827))
location: region:9901279-9941827:-1
so has part: feature:9941740-9941827:-1:exon
so has part: feature:9938328-9938502:-1:exon
so has part: feature:9927675-9927773:-1:exon
so has part: feature:9925738-9925858:-1:exon
so has part: feature:9923705-9923905:-1:exon
so has part: feature:9919009-9919115:-1:exon
so has part: feature:9913187-9913276:-1:exon
so has part: feature:9910034-9910084:-1:exon
so has part: feature:9904605-9904738:-1:exon
so has part: feature:9901279-9902926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9941740-9941827:-1:exon

position:9941740:-1
position: 9941740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9938328-9938502:-1:exon

position:9938328:-1
position: 9938328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9938502:-1
position: 9938502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9927675-9927773:-1:exon

position:9927675:-1
position: 9927675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9927773:-1
position: 9927773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9925738-9925858:-1:exon

position:9925738:-1
position: 9925738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9925858:-1
position: 9925858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9923705-9923905:-1:exon

position:9923705:-1
position: 9923705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9923905:-1
position: 9923905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9919009-9919115:-1:exon

position:9919009:-1
position: 9919009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9919115:-1
position: 9919115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9913187-9913276:-1:exon

position:9913187:-1
position: 9913187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9913276:-1
position: 9913276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9910034-9910084:-1:exon

position:9910034:-1
position: 9910034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9910084:-1
position: 9910084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9904605-9904738:-1:exon

position:9904605:-1
position: 9904605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9904738:-1
position: 9904738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9901279-9902926:-1:exon

position:9902926:-1
position: 9902926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ATAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATPase family AAA domain-containing protein 1
translation: MVHAETFSRPLSRNEVVGLIFRLTIFGAVTYFTIKWMVDAIDPTRKQKVEAQKQAEKLMKQIGVKNVKLSEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKDAAFQNVLTHVCLD
SIO_010081: ATAD1
subclass of: SO_0000673
so part of: ATAD1
location: complement(join(9902806..9902926,9904605..9904738,9910034..9910084,9913187..9913276,9919009..9919115,9923705..9923905,9925738..9925858,9927675..9927773,9938328..9938489))
location: region:9902806-9938489:-1
so has part: feature:9938328-9938489:-1:exon
so has part: feature:9927675-9927773:-1:exon
so has part: feature:9925738-9925858:-1:exon
so has part: feature:9923705-9923905:-1:exon
so has part: feature:9919009-9919115:-1:exon
so has part: feature:9913187-9913276:-1:exon
so has part: feature:9910034-9910084:-1:exon
so has part: feature:9904605-9904738:-1:exon
so has part: feature:9902806-9902926:-1:exon

XP_019808365.1
type: Protein
SIO_000068: ncbiprotein

position:9902806:-1
position: 9902806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9938489:-1
position: 9938489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9938328-9938489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9927675-9927773:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9925738-9925858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9923705-9923905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9919009-9919115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9913187-9913276:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9910034-9910084:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9904605-9904738:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9902806-9902926:-1:exon

LOC109553007
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109553007
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9941897..9948503
location: region:9941897-9948503:1
so has part: feature:9941897-9948503:1:exon
subclass of: SO_0000011

109553007
type: Gene
SIO_000068: ncbigene

position:9941897:1
position: 9941897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9948503:1
position: 9948503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9941897-9948503:1:exon

LOC109553007
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109553007
product: uncharacterized LOC109553007
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_002179955.1
SIO_010081: LOC109553007
subclass of: SO_0000673
so part of: LOC109553007
location: join(9941897..9941986,9942478..9942581,9948422..9948503)
location: region:9941897-9948503:1
so has part: feature:9941897-9941986:1:exon
so has part: feature:9942478-9942581:1:exon
so has part: feature:9948422-9948503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9941897-9941986:1:exon

position:9941986:1
position: 9941986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9942478-9942581:1:exon

position:9942478:1
position: 9942478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9942581:1
position: 9942581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9948422-9948503:1:exon

position:9948422:1
position: 9948422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTEN
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PTEN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10044428..10083743
location: region:10044428-10083743:1
so has part: feature:10044428-10083743:1:exon
subclass of: SO_0000010

109552991
type: Gene
SIO_000068: ncbigene

position:10044428:1
position: 10044428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10083743:1
position: 10083743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10044428-10083743:1:exon

PTEN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PTEN
product: phosphatase and tensin homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 64 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 260 samples with support for all annotated introns
transcript id: XM_019952769.1
SIO_010081: PTEN
subclass of: SO_0000673
so part of: PTEN
location: join(10044428..10044493,10051126..10051169,10052953..10053191,10067994..10068135,10073519..10073685,10076046..10076270,10078727..10083743)
location: region:10044428-10083743:1
so has part: feature:10044428-10044493:1:exon
so has part: feature:10051126-10051169:1:exon
so has part: feature:10052953-10053191:1:exon
so has part: feature:10067994-10068135:1:exon
so has part: feature:10073519-10073685:1:exon
so has part: feature:10076046-10076270:1:exon
so has part: feature:10078727-10083743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10044428-10044493:1:exon

position:10044493:1
position: 10044493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10051126-10051169:1:exon

position:10051126:1
position: 10051126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10051169:1
position: 10051169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10052953-10053191:1:exon

position:10052953:1
position: 10052953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10053191:1
position: 10053191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10067994-10068135:1:exon

position:10067994:1
position: 10067994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10068135:1
position: 10068135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10073519-10073685:1:exon

position:10073519:1
position: 10073519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10073685:1
position: 10073685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10076046-10076270:1:exon

position:10076046:1
position: 10076046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10076270:1
position: 10076270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10078727-10083743:1:exon

position:10078727:1
position: 10078727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTEN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PTEN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
translation: MICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQRRYVYYYSYLLKNHLDYRPVALLFHKMMFETIPMFSGGTCNPQFVVCQLKVKIYSSNSGPTRREDKFMYFEFPQPLPVCGDIKVEFFHKQNKMLKKDKMFHFWVNTFFIPGPEETSEKVENGSLCDQEIDSICSIERADNDKEYLVLTLTKNDLDKANKDKANRYFSPNFKVKLYFTKTVEESSNPEASSSTSVTPDVSDNEPDHYRYSDTTDSDPENEPFDEDQHTQITKV
SIO_010081: PTEN
subclass of: SO_0000673
so part of: PTEN
location: join(10053099..10053191,10067994..10068135,10073519..10073685,10076046..10076270,10078727..10078912)
location: region:10053099-10078912:1
so has part: feature:10053099-10053191:1:exon
so has part: feature:10067994-10068135:1:exon
so has part: feature:10073519-10073685:1:exon
so has part: feature:10076046-10076270:1:exon
so has part: feature:10078727-10078912:1:exon

XP_019808328.1
type: Protein
SIO_000068: ncbiprotein

position:10053099:1
position: 10053099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10078912:1
position: 10078912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10053099-10053191:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10067994-10068135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10073519-10073685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10076046-10076270:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10078727-10078912:1:exon

RNLS
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: RNLS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10444570..10725837)
location: region:10444570-10725837:-1
so has part: feature:10444570-10725837:-1:exon
subclass of: SO_0000010

109553051
type: Gene
SIO_000068: ncbigene

position:10444570:-1
position: 10444570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10725837:-1
position: 10725837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10444570-10725837:-1:exon

RNLS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RNLS
product: renalase, FAD dependent amine oxidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 233 samples with support for all annotated introns
transcript id: XM_019952912.1
SIO_010081: RNLS
subclass of: SO_0000673
so part of: RNLS
location: complement(join(10444570..10446389,10472975..10473150,10509287..10509460,10713917..10714075,10723607..10723749,10725364..10725837))
location: region:10444570-10725837:-1
so has part: feature:10725364-10725837:-1:exon
so has part: feature:10723607-10723749:-1:exon
so has part: feature:10713917-10714075:-1:exon
so has part: feature:10509287-10509460:-1:exon
so has part: feature:10472975-10473150:-1:exon
so has part: feature:10444570-10446389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10725364-10725837:-1:exon

position:10725364:-1
position: 10725364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10723607-10723749:-1:exon

position:10723607:-1
position: 10723607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10723749:-1
position: 10723749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10713917-10714075:-1:exon

position:10713917:-1
position: 10713917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10714075:-1
position: 10714075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10509287-10509460:-1:exon

position:10509287:-1
position: 10509287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10509460:-1
position: 10509460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10472975-10473150:-1:exon

position:10472975:-1
position: 10472975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10473150:-1
position: 10473150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10444570-10446389:-1:exon

position:10446389:-1
position: 10446389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNLS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RNLS
product: renalase, FAD dependent amine oxidase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 7 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 233 samples with support for all annotated introns
transcript id: XM_019952914.1
SIO_010081: RNLS
subclass of: SO_0000673
so part of: RNLS
location: complement(join(10444570..10446389,10472975..10473150,10509287..10509460,10713917..10714075,10723607..10723749,10724352..10724457,10725364..10725533))
location: region:10444570-10725533:-1
so has part: feature:10725364-10725533:-1:exon
so has part: feature:10724352-10724457:-1:exon
so has part: feature:10723607-10723749:-1:exon
so has part: feature:10713917-10714075:-1:exon
so has part: feature:10509287-10509460:-1:exon
so has part: feature:10472975-10473150:-1:exon
so has part: feature:10444570-10446389:-1:exon

position:10725533:-1
position: 10725533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10725364-10725533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10724352-10724457:-1:exon

position:10724352:-1
position: 10724352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10724457:-1
position: 10724457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10723607-10723749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10713917-10714075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10509287-10509460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10472975-10473150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10444570-10446389:-1:exon

RNLS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RNLS
product: renalase, FAD dependent amine oxidase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 121 samples with support for all annotated introns
transcript id: XM_019952915.1
SIO_010081: RNLS
subclass of: SO_0000673
so part of: RNLS
location: complement(join(10444570..10446389,10472975..10473150,10509287..10509460,10713917..10714075,10723607..10723749,10724352..10724482,10725364..10725453))
location: region:10444570-10725453:-1
so has part: feature:10725364-10725453:-1:exon
so has part: feature:10724352-10724482:-1:exon
so has part: feature:10723607-10723749:-1:exon
so has part: feature:10713917-10714075:-1:exon
so has part: feature:10509287-10509460:-1:exon
so has part: feature:10472975-10473150:-1:exon
so has part: feature:10444570-10446389:-1:exon

position:10725453:-1
position: 10725453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10725364-10725453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10724352-10724482:-1:exon

position:10724482:-1
position: 10724482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10723607-10723749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10713917-10714075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10509287-10509460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10472975-10473150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10444570-10446389:-1:exon

RNLS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RNLS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: renalase isoform X1
translation: MIYRFWGREADWKSQLIGWSQTMLEDSSWLSNQEEGQDLLVFRADPSLSPSRLLSAPCRLTRELHRGRXGPGERGLQLWPAGLWRRFHRLQAGHPGAETAGHGAGADRGRRADGKLVRGAAEEGGVQFSAPHCVGQGRGFSFYDELLAGGILKPLISPIDGMVTKEGDCNFVAPHGVSSIINHYLKQSGADICFRQRVTQINLRDNKWEVSRETGSSEQFDIVVLTMPAPQILQLRGDITNLISECQRQQLESVSYSSRYALGLFYEAGTKIDVPWAGRYITSNPCIRFISIDNKKRNIESSEIGPSLVIHTTVPFGVTHLEHSTEDVQELIFKQLENIVPGLPQPVATKCQKWRHSQVTNAAANSLGQMTLHLQPXLVCGGDGFTQSNFDGCITSALCVLEALKNHI
SIO_010081: RNLS
subclass of: SO_0000673
so part of: RNLS
location: complement(join(10446237..10446389,10472975..10473150,10509287..10509460,10713917..10714075,10723607..10723749,10725364..10725785))
location: region:10446237-10725785:-1
so has part: feature:10725364-10725785:-1:exon
so has part: feature:10723607-10723749:-1:exon
so has part: feature:10713917-10714075:-1:exon
so has part: feature:10509287-10509460:-1:exon
so has part: feature:10472975-10473150:-1:exon
so has part: feature:10446237-10446389:-1:exon

XP_019808471.1
type: Protein
SIO_000068: ncbiprotein

position:10446237:-1
position: 10446237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10725785:-1
position: 10725785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10725364-10725785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10723607-10723749:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10713917-10714075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10509287-10509460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10472975-10473150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10446237-10446389:-1:exon

RNLS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RNLS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: renalase isoform X3
translation: MARVLIVGAGLTGSLCAALLRREASSSLRLTVWDKAGDSGGRMTTASSPHNPQSTVDLGAQYITCTPHYAKIHQSFYDELLAGGILKPLISPIDGMVTKEGDCNFVAPHGVSSIINHYLKQSGADICFRQRVTQINLRDNKWEVSRETGSSEQFDIVVLTMPAPQILQLRGDITNLISECQRQQLESVSYSSRYALGLFYEAGTKIDVPWAGRYITSNPCIRFISIDNKKRNIESSEIGPSLVIHTTVPFGVTHLEHSTEDVQELIFKQLENIVPGLPQPVATKCQKWRHSQVTNAAANSLGQMTLHLQPXLVCGGDGFTQSNFDGCITSALCVLEALKNHI
SIO_010081: RNLS
subclass of: SO_0000673
so part of: RNLS
location: complement(join(10446237..10446389,10472975..10473150,10509287..10509460,10713917..10714075,10723607..10723749,10724352..10724457,10725364..10725481))
location: region:10446237-10725481:-1
so has part: feature:10725364-10725481:-1:exon
so has part: feature:10724352-10724457:-1:exon
so has part: feature:10723607-10723749:-1:exon
so has part: feature:10713917-10714075:-1:exon
so has part: feature:10509287-10509460:-1:exon
so has part: feature:10472975-10473150:-1:exon
so has part: feature:10446237-10446389:-1:exon

XP_019808473.1
type: Protein
SIO_000068: ncbiprotein

position:10725481:-1
position: 10725481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10725364-10725481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10724352-10724457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10723607-10723749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10713917-10714075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10509287-10509460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10472975-10473150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10446237-10446389:-1:exon

RNLS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RNLS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: renalase isoform X4
translation: MTTASSPHNPQSTVDLGAQYITCTPHYAKIHQSFYDELLAGGILKPLISPIDGMVTKEGDCNFVAPHGVSSIINHYLKQSGADICFRQRVTQINLRDNKWEVSRETGSSEQFDIVVLTMPAPQILQLRGDITNLISECQRQQLESVSYSSRYALGLFYEAGTKIDVPWAGRYITSNPCIRFISIDNKKRNIESSEIGPSLVIHTTVPFGVTHLEHSTEDVQELIFKQLENIVPGLPQPVATKCQKWRHSQVTNAAANSLGQMTLHLQPXLVCGGDGFTQSNFDGCITSALCVLEALKNHI
SIO_010081: RNLS
subclass of: SO_0000673
so part of: RNLS
location: complement(join(10446237..10446389,10472975..10473150,10509287..10509460,10713917..10714075,10723607..10723749,10724352..10724449))
location: region:10446237-10724449:-1
so has part: feature:10724352-10724449:-1:exon
so has part: feature:10723607-10723749:-1:exon
so has part: feature:10713917-10714075:-1:exon
so has part: feature:10509287-10509460:-1:exon
so has part: feature:10472975-10473150:-1:exon
so has part: feature:10446237-10446389:-1:exon

XP_019808474.1
type: Protein
SIO_000068: ncbiprotein

position:10724449:-1
position: 10724449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10724352-10724449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10723607-10723749:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10713917-10714075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10509287-10509460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10472975-10473150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10446237-10446389:-1:exon

RNLS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RNLS
product: renalase, FAD dependent amine oxidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_019952913.1
SIO_010081: RNLS
subclass of: SO_0000673
so part of: RNLS
location: complement(join(10470054..10470639,10472975..10473150,10509287..10509460,10713917..10714075,10723607..10723749,10725364..10725837))
location: region:10470054-10725837:-1
so has part: feature:10725364-10725837:-1:exon
so has part: feature:10723607-10723749:-1:exon
so has part: feature:10713917-10714075:-1:exon
so has part: feature:10509287-10509460:-1:exon
so has part: feature:10472975-10473150:-1:exon
so has part: feature:10470054-10470639:-1:exon

position:10470054:-1
position: 10470054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10725364-10725837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10723607-10723749:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10713917-10714075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10509287-10509460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10472975-10473150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10470054-10470639:-1:exon

position:10470639:-1
position: 10470639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNLS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RNLS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: renalase isoform X2
translation: MIYRFWGREADWKSQLIGWSQTMLEDSSWLSNQEEGQDLLVFRADPSLSPSRLLSAPCRLTRELHRGRXGPGERGLQLWPAGLWRRFHRLQAGHPGAETAGHGAGADRGRRADGKLVRGAAEEGGVQFSAPHCVGQGRGFSFYDELLAGGILKPLISPIDGMVTKEGDCNFVAPHGVSSIINHYLKQSGADICFRQRVTQINLRDNKWEVSRETGSSEQFDIVVLTMPAPQILQLRGDITNLISECQRQQLESVSYSSRYALGLFYEAGTKIDVPWAGRYITSNPCIRFISIDNKKRNIESSEIGPSLVIHTTVPFGVTHLEHSTEDVQELIFKQLENIVPGLPQPVATKCQKWRHSQDSTAFGRVLLLRKEADEERRCVERLAGLLCASHLGFE
SIO_010081: RNLS
subclass of: SO_0000673
so part of: RNLS
location: complement(join(10470526..10470639,10472975..10473150,10509287..10509460,10713917..10714075,10723607..10723749,10725364..10725785))
location: region:10470526-10725785:-1
so has part: feature:10725364-10725785:-1:exon
so has part: feature:10723607-10723749:-1:exon
so has part: feature:10713917-10714075:-1:exon
so has part: feature:10509287-10509460:-1:exon
so has part: feature:10472975-10473150:-1:exon
so has part: feature:10470526-10470639:-1:exon

XP_019808472.1
type: Protein
SIO_000068: ncbiprotein

position:10470526:-1
position: 10470526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10725364-10725785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10723607-10723749:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10713917-10714075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10509287-10509460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10472975-10473150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10470526-10470639:-1:exon

LIPJ
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LIPJ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10725882..10762625
location: region:10725882-10762625:1
so has part: feature:10725882-10762625:1:exon
subclass of: SO_0000010

109553053
type: Gene
SIO_000068: ncbigene

position:10725882:1
position: 10725882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10762625:1
position: 10762625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10725882-10762625:1:exon

LIPJ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LIPJ
product: lipase family member J
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019952916.1
SIO_010081: LIPJ
subclass of: SO_0000673
so part of: LIPJ
location: join(10725882..10725966,10739545..10739651,10743091..10743202,10743939..10744059,10748238..10748436,10748936..10749045,10750548..10750684,10751057..10751203,10756252..10756323,10760878..10760949,10762034..10762625)
location: region:10725882-10762625:1
so has part: feature:10725882-10725966:1:exon
so has part: feature:10739545-10739651:1:exon
so has part: feature:10743091-10743202:1:exon
so has part: feature:10743939-10744059:1:exon
so has part: feature:10748238-10748436:1:exon
so has part: feature:10748936-10749045:1:exon
so has part: feature:10750548-10750684:1:exon
so has part: feature:10751057-10751203:1:exon
so has part: feature:10756252-10756323:1:exon
so has part: feature:10760878-10760949:1:exon
so has part: feature:10762034-10762625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10725882-10725966:1:exon

position:10725966:1
position: 10725966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10739545-10739651:1:exon

position:10739545:1
position: 10739545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10739651:1
position: 10739651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10743091-10743202:1:exon

position:10743091:1
position: 10743091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10743202:1
position: 10743202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10743939-10744059:1:exon

position:10743939:1
position: 10743939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10744059:1
position: 10744059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10748238-10748436:1:exon

position:10748238:1
position: 10748238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10748436:1
position: 10748436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10748936-10749045:1:exon

position:10748936:1
position: 10748936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10749045:1
position: 10749045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10750548-10750684:1:exon

position:10750548:1
position: 10750548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10750684:1
position: 10750684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10751057-10751203:1:exon

position:10751057:1
position: 10751057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10751203:1
position: 10751203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10756252-10756323:1:exon

position:10756252:1
position: 10756252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10756323:1
position: 10756323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10760878-10760949:1:exon

position:10760878:1
position: 10760878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10760949:1
position: 10760949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10762034-10762625:1:exon

position:10762034:1
position: 10762034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIPJ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LIPJ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member J
translation: MWYLFKVMSFILILGTTHGVFRKQRSVNPEASMNISQIISYWGYPDEEYDITTEDGYILGLYRIPYGKTNSENNSVQRLVVYLQHGLLTSASSWISNLPNNSLGFLLADAGYDVWMGNSRGTTWSRKHLYLKTNSKEFWAFSFDEMAKYDLPASIDFIVKQTQQQQIFYVGHSQGTTIAFITFSTIPKIVERIKVFFALAPVFSIKYSKSPLIKMAYNWKSLIKFFSGSKEFLPNTSFKRFVGSKLCPLKIFGKICRDVLFMISGYDLKNFNTSRVDVYMSQNPAGTSVQNMVHWSQLFNSSHLKAFDWGSPDLNLVHFNQTTSPLYNVTSMNVPTATWSGDSDLLADPEDVKILLPEITNHIYHKTISYYNHVDFLFGLDVYHQVYSEIIDIIQGNP
SIO_010081: LIPJ
subclass of: SO_0000673
so part of: LIPJ
location: join(10743098..10743202,10743939..10744059,10748238..10748436,10748936..10749045,10750548..10750684,10751057..10751203,10756252..10756323,10760878..10760949,10762034..10762267)
location: region:10743098-10762267:1
so has part: feature:10743098-10743202:1:exon
so has part: feature:10743939-10744059:1:exon
so has part: feature:10748238-10748436:1:exon
so has part: feature:10748936-10749045:1:exon
so has part: feature:10750548-10750684:1:exon
so has part: feature:10751057-10751203:1:exon
so has part: feature:10756252-10756323:1:exon
so has part: feature:10760878-10760949:1:exon
so has part: feature:10762034-10762267:1:exon

XP_019808475.1
type: Protein
SIO_000068: ncbiprotein

position:10743098:1
position: 10743098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10762267:1
position: 10762267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10743098-10743202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10743939-10744059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10748238-10748436:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10748936-10749045:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10750548-10750684:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10751057-10751203:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10756252-10756323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10760878-10760949:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10762034-10762267:1:exon

LOC109579062
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10765446..10766493
location: region:10765446-10766493:1
so has part: feature:10765446-10766493:1:exon
subclass of: SO_0000010

109579062
type: Gene
SIO_000068: ncbigene

position:10765446:1
position: 10765446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10766493:1
position: 10766493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10765446-10766493:1:exon

LOC109579062
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109579062
product: replication protein A 32 kDa subunit-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988561.1
SIO_010081: LOC109579062
subclass of: SO_0000673
so part of: LOC109579062
location: join(10765446..10766180,10766282..10766493)
location: region:10765446-10766493:1
so has part: feature:10765446-10766180:1:exon
so has part: feature:10766282-10766493:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10765446-10766180:1:exon

position:10766180:1
position: 10766180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10766282-10766493:1:exon

position:10766282:1
position: 10766282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109579062
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109579062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: replication protein A 32 kDa subunit-like
translation: MWNSGCESYSTSSFGGAGGYTQSPGGFGSPTASQAKKKSRAQAQHIVPCTISQLLSATLVDEIFRIGNVEISRVTIVGIIRNAEKAATNIVYKIEDMTTVPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFRIMPLEDMNEFTTHILEVVNAHMMLSKSNSQPSAGRAPISKPGMGEAGNFSGNNFIPANGLTVAQNQVLNLIKACPRPEGLNFQDLKNQLQHMSVASIKLARNFRSLAVDFLSNEGHIYSTVDDDHFKSTDAE
SIO_010081: LOC109579062
subclass of: SO_0000673
so part of: LOC109579062
location: join(10765446..10766180,10766282..10766380)
location: region:10765446-10766380:1
so has part: feature:10765446-10766180:1:exon
so has part: feature:10766282-10766380:1:exon

XP_019844120.1
type: Protein
SIO_000068: ncbiprotein

position:10766380:1
position: 10766380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10765446-10766180:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10766282-10766380:1:exon

LOC109578969
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10769235..10772988
location: region:10769235-10772988:1
so has part: feature:10769235-10772988:1:exon

109578969
type: Gene
SIO_000068: ncbigene

position:10769235:1
position: 10769235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10772988:1
position: 10772988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10769235-10772988:1:exon

LOC109578969
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578969
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578969
subclass of: SO_0000673
so part of: LOC109578969
location: 10769235..10771489
location: region:10769235-10771489:1
so has part: feature:10769235-10771489:1:exon

position:10771489:1
position: 10771489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10769235-10771489:1:exon

LOC109578969
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578969
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578969
subclass of: SO_0000673
so part of: LOC109578969
location: 10771700..10771817
location: region:10771700-10771817:1
so has part: feature:10771700-10771817:1:exon

position:10771700:1
position: 10771700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10771817:1
position: 10771817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10771700-10771817:1:exon

LOC109578969
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578969
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578969
subclass of: SO_0000673
so part of: LOC109578969
location: 10772804..10772988
location: region:10772804-10772988:1
so has part: feature:10772804-10772988:1:exon

position:10772804:1
position: 10772804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10772804-10772988:1:exon

LOC109578970
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(10801698..10802166)
location: region:10801698-10802166:-1
so has part: feature:10801698-10802166:-1:exon

109578970
type: Gene
SIO_000068: ncbigene

position:10801698:-1
position: 10801698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10802166:-1
position: 10802166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10801698-10802166:-1:exon

LOC109578970
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578970
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
pseudo: true
SIO_010081: LOC109578970
subclass of: SO_0000673
so part of: LOC109578970
location: complement(10801698..10802166)
location: region:10801698-10802166:-1
so has part: feature:10801698-10802166:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10801698-10802166:-1:exon

LOC109579092
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10889920..10903976
location: region:10889920-10903976:1
so has part: feature:10889920-10903976:1:exon
subclass of: SO_0000010

109579092
type: Gene
SIO_000068: ncbigene

position:10889920:1
position: 10889920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10903976:1
position: 10903976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10889920-10903976:1:exon

LOC109579092
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109579092
product: gastric triacylglycerol lipase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 10 Proteins
transcript id: XM_019988594.1
SIO_010081: LOC109579092
subclass of: SO_0000673
so part of: LOC109579092
location: join(10889920..10889983,10892670..10892778,10892994..10893111,10893860..10894058,10895149..10895258,10898098..10898234,10900108..10900254,10901440..10901511,10901931..10902002,10903608..10903976)
location: region:10889920-10903976:1
so has part: feature:10889920-10889983:1:exon
so has part: feature:10892670-10892778:1:exon
so has part: feature:10892994-10893111:1:exon
so has part: feature:10893860-10894058:1:exon
so has part: feature:10895149-10895258:1:exon
so has part: feature:10898098-10898234:1:exon
so has part: feature:10900108-10900254:1:exon
so has part: feature:10901440-10901511:1:exon
so has part: feature:10901931-10902002:1:exon
so has part: feature:10903608-10903976:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10889920-10889983:1:exon

position:10889983:1
position: 10889983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10892670-10892778:1:exon

position:10892670:1
position: 10892670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10892778:1
position: 10892778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10892994-10893111:1:exon

position:10892994:1
position: 10892994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10893111:1
position: 10893111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10893860-10894058:1:exon

position:10893860:1
position: 10893860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10894058:1
position: 10894058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10895149-10895258:1:exon

position:10895149:1
position: 10895149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10895258:1
position: 10895258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10898098-10898234:1:exon

position:10898098:1
position: 10898098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10898234:1
position: 10898234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10900108-10900254:1:exon

position:10900108:1
position: 10900108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10900254:1
position: 10900254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10901440-10901511:1:exon

position:10901440:1
position: 10901440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10901511:1
position: 10901511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10901931-10902002:1:exon

position:10901931:1
position: 10901931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10902002:1
position: 10902002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10903608-10903976:1:exon

position:10903608:1
position: 10903608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109579092
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109579092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric triacylglycerol lipase
translation: MWWLLVXVCFIHMSGNAFCFLGKIAKNPEASMNVSQMISYWGYPSEMHKVITADGYILQVYRIPHGKNNANHLGQRPVVFLQHGLLGSATNWISNLPKNSLGFLLADAGYDVWLGNSRGNTWAQEHLYYSPDSPEFWAFSFDEMAEYDLPSTIDFILRRTGQKKLHYVGHSQGTTIGFIAFSTNPTLAEKIKVFYALAPVATVKYTKSLFNKLALIPHFLFKIIFGDKMFYPHTFLEQFLGVEMCSRETLDVLCKNALFAITGVDNKNFNMSRLDVYIAHNPAGTSVQNTLHWRQAVKSGKFQAFDWGAPYQNLMHYHQPTPPIYNLTAMNVPIAVWSADNDLLADPQDVDLLLSKLSNLIYHKEIPNYNHLDFIWAMDAPQEVYNEIVSLMAEDKK
SIO_010081: LOC109579092
subclass of: SO_0000673
so part of: LOC109579092
location: join(10892677..10892778,10892994..10893111,10893860..10894058,10895149..10895258,10898098..10898234,10900108..10900254,10901440..10901511,10901931..10902002,10903608..10903844)
location: region:10892677-10903844:1
so has part: feature:10892677-10892778:1:exon
so has part: feature:10892994-10893111:1:exon
so has part: feature:10893860-10894058:1:exon
so has part: feature:10895149-10895258:1:exon
so has part: feature:10898098-10898234:1:exon
so has part: feature:10900108-10900254:1:exon
so has part: feature:10901440-10901511:1:exon
so has part: feature:10901931-10902002:1:exon
so has part: feature:10903608-10903844:1:exon

XP_019844153.1
type: Protein
SIO_000068: ncbiprotein

position:10892677:1
position: 10892677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10903844:1
position: 10903844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10892677-10892778:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10892994-10893111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10893860-10894058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10895149-10895258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10898098-10898234:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10900108-10900254:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10901440-10901511:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10901931-10902002:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10903608-10903844:1:exon

LIPK
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LIPK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10959530..10977333
location: region:10959530-10977333:1
so has part: feature:10959530-10977333:1:exon
subclass of: SO_0000010

109579090
type: Gene
SIO_000068: ncbigene

position:10959530:1
position: 10959530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10977333:1
position: 10977333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10959530-10977333:1:exon

LIPK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LIPK
product: lipase family member K, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988591.1
SIO_010081: LIPK
subclass of: SO_0000673
so part of: LIPK
location: join(10959530..10959634,10960553..10960667,10962659..10962857,10965526..10965635,10966542..10966678,10969993..10970139,10970635..10970706,10973293..10973364,10976603..10977333)
location: region:10959530-10977333:1
so has part: feature:10959530-10959634:1:exon
so has part: feature:10960553-10960667:1:exon
so has part: feature:10962659-10962857:1:exon
so has part: feature:10965526-10965635:1:exon
so has part: feature:10966542-10966678:1:exon
so has part: feature:10969993-10970139:1:exon
so has part: feature:10970635-10970706:1:exon
so has part: feature:10973293-10973364:1:exon
so has part: feature:10976603-10977333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10959530-10959634:1:exon

position:10959634:1
position: 10959634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10960553-10960667:1:exon

position:10960553:1
position: 10960553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10960667:1
position: 10960667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10962659-10962857:1:exon

position:10962659:1
position: 10962659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10962857:1
position: 10962857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10965526-10965635:1:exon

position:10965526:1
position: 10965526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10965635:1
position: 10965635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10966542-10966678:1:exon

position:10966542:1
position: 10966542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10966678:1
position: 10966678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10969993-10970139:1:exon

position:10969993:1
position: 10969993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10970139:1
position: 10970139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10970635-10970706:1:exon

position:10970635:1
position: 10970635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10970706:1
position: 10970706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10973293-10973364:1:exon

position:10973293:1
position: 10973293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10973364:1
position: 10973364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10976603-10977333:1:exon

position:10976603:1
position: 10976603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIPK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LIPK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member K isoform X1
translation: MWQLLAATCWMLLLGPVFGYHKKGCTTNPEATMNISQIISYWGYPYEIYDVVTEDGYILGTYRIPHGRGCPKTAPKPVVYLQHGLVASASNWICNLPNNSLAFLLADVGYDVWLGNSRGNTWSRKHLKFSPKSPEYWAFSLDEMAKYDLPATINFIIXKTRQEQLYYVGHSQGTTIAFIAFSTNPELAKRIKIFFALAPVTTLKYTQSPMKKLTNLSRKAVKVLFGDKMFSPHTFFEQFIATKVCNRKIFRRICSNFIFTLSGFDPKNLNMSRLDVYFAQSSAGTSVQTMLHWAQAVNSGRFQAFDWGNPDQNMKHFHQLTPPLYNVSNMEVPTAVWSGGQDYVADLKDVENLLPXIPKLIYYKSIPHYNHVDFYLGQDAPLEIYQDLIRMMEEWL
SIO_010081: LIPK
subclass of: SO_0000673
so part of: LIPK
location: join(10959530..10959634,10960553..10960667,10962659..10962857,10965526..10965635,10966542..10966678,10969993..10970139,10970635..10970706,10973293..10973364,10976603..10976836)
location: region:10959530-10976836:1
so has part: feature:10959530-10959634:1:exon
so has part: feature:10960553-10960667:1:exon
so has part: feature:10962659-10962857:1:exon
so has part: feature:10965526-10965635:1:exon
so has part: feature:10966542-10966678:1:exon
so has part: feature:10969993-10970139:1:exon
so has part: feature:10970635-10970706:1:exon
so has part: feature:10973293-10973364:1:exon
so has part: feature:10976603-10976836:1:exon

XP_019844150.1
type: Protein
SIO_000068: ncbiprotein

position:10976836:1
position: 10976836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10959530-10959634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10960553-10960667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10962659-10962857:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10965526-10965635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10966542-10966678:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10969993-10970139:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10970635-10970706:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10973293-10973364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10976603-10976836:1:exon

LIPK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LIPK
product: lipase family member K, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988592.1
SIO_010081: LIPK
subclass of: SO_0000673
so part of: LIPK
location: join(10959626..10959634,10960553..10960655,10962623..10962857,10965526..10965635,10966542..10966678,10969993..10970139,10970635..10970706,10973293..10973364,10976603..10977333)
location: region:10959626-10977333:1
so has part: feature:10959626-10959634:1:exon
so has part: feature:10960553-10960655:1:exon
so has part: feature:10962623-10962857:1:exon
so has part: feature:10965526-10965635:1:exon
so has part: feature:10966542-10966678:1:exon
so has part: feature:10969993-10970139:1:exon
so has part: feature:10970635-10970706:1:exon
so has part: feature:10973293-10973364:1:exon
so has part: feature:10976603-10977333:1:exon

position:10959626:1
position: 10959626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10959626-10959634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10960553-10960655:1:exon

position:10960655:1
position: 10960655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10962623-10962857:1:exon

position:10962623:1
position: 10962623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10965526-10965635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10966542-10966678:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10969993-10970139:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10970635-10970706:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10973293-10973364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10976603-10977333:1:exon

LIPK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LIPK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member K isoform X2
translation: MNISQIISYWGYPYEIYDVVTEDGYILGTYRIPHGRGFQIKNSHCLCFAAPKPVVYLQHGLVASASNWICNLPNNSLAFLLADVGYDVWLGNSRGNTWSRKHLKFSPKSPEYWAFSLDEMAKYDLPATINFIIXKTRQEQLYYVGHSQGTTIAFIAFSTNPELAKRIKIFFALAPVTTLKYTQSPMKKLTNLSRKAVKVLFGDKMFSPHTFFEQFIATKVCNRKIFRRICSNFIFTLSGFDPKNLNMSRLDVYFAQSSAGTSVQTMLHWAQAVNSGRFQAFDWGNPDQNMKHFHQLTPPLYNVSNMEVPTAVWSGGQDYVADLKDVENLLPXIPKLIYYKSIPHYNHVDFYLGQDAPLEIYQDLIRMMEEWL
SIO_010081: LIPK
subclass of: SO_0000673
so part of: LIPK
location: join(10959626..10959634,10960553..10960655,10962623..10962857,10965526..10965635,10966542..10966678,10969993..10970139,10970635..10970706,10973293..10973364,10976603..10976836)
location: region:10959626-10976836:1
so has part: feature:10959626-10959634:1:exon
so has part: feature:10960553-10960655:1:exon
so has part: feature:10962623-10962857:1:exon
so has part: feature:10965526-10965635:1:exon
so has part: feature:10966542-10966678:1:exon
so has part: feature:10969993-10970139:1:exon
so has part: feature:10970635-10970706:1:exon
so has part: feature:10973293-10973364:1:exon
so has part: feature:10976603-10976836:1:exon

XP_019844151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10959626-10959634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10960553-10960655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10962623-10962857:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10965526-10965635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10966542-10966678:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10969993-10970139:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10970635-10970706:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10973293-10973364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10976603-10976836:1:exon

LIPM
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LIPM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11047648..11067989
location: region:11047648-11067989:1
so has part: feature:11047648-11067989:1:exon
subclass of: SO_0000010

109553232
type: Gene
SIO_000068: ncbigene

position:11047648:1
position: 11047648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11067989:1
position: 11067989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11047648-11067989:1:exon

LIPM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LIPM
product: lipase family member M
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 5 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019953214.1
SIO_010081: LIPM
subclass of: SO_0000673
so part of: LIPM
location: join(11047648..11047965,11051078..11051195,11056980..11057178,11058164..11058273,11059808..11059944,11060075..11060221,11063061..11063132,11064523..11064594,11067389..11067989)
location: region:11047648-11067989:1
so has part: feature:11047648-11047965:1:exon
so has part: feature:11051078-11051195:1:exon
so has part: feature:11056980-11057178:1:exon
so has part: feature:11058164-11058273:1:exon
so has part: feature:11059808-11059944:1:exon
so has part: feature:11060075-11060221:1:exon
so has part: feature:11063061-11063132:1:exon
so has part: feature:11064523-11064594:1:exon
so has part: feature:11067389-11067989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11047648-11047965:1:exon

position:11047965:1
position: 11047965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11051078-11051195:1:exon

position:11051078:1
position: 11051078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11051195:1
position: 11051195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11056980-11057178:1:exon

position:11056980:1
position: 11056980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11057178:1
position: 11057178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11058164-11058273:1:exon

position:11058164:1
position: 11058164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11058273:1
position: 11058273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11059808-11059944:1:exon

position:11059808:1
position: 11059808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11059944:1
position: 11059944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11060075-11060221:1:exon

position:11060075:1
position: 11060075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11060221:1
position: 11060221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11063061-11063132:1:exon

position:11063061:1
position: 11063061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11063132:1
position: 11063132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11064523-11064594:1:exon

position:11064523:1
position: 11064523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11064594:1
position: 11064594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11067389-11067989:1:exon

position:11067389:1
position: 11067389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIPM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LIPM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member M
translation: MPKILSREWIVSYRNEMWLLILVAHLFQRNVNSGHMRTTTVDPEAFMNISEIIQHKRYPCEEYEVLTEDGYILSVNRIPQGLVQLKKTGPRPVVLLQHGLLGDASNWISNLPNNSLGFILADAGFDVWLGNSRGNTWSRKHKTLSIDQDEFWAFSYDEMARFDLPAVINFILQKTGQEKIYYVGYSQGTTMGFIAFSTMPELAQKIKMYFALAPIATIKYAKSPGTKFLLLPDMMIKGLFGKREFLYQTRFLRQFVVYLCSQVIMDQICSNIMLLLGGFNPKNMNMSRANVYVAHTPSGTSVQNILHWSQAANSGELRAFDWGSETKNLEKSNQPTPVRYKVRDMTVPTAIWTGGQDWLSNPDDVRTLLSEVTNLIYHKNIPEWAHVDFIWGLDAPHRMYNEIIHLMKQEDTSLSQGTISVSL
SIO_010081: LIPM
subclass of: SO_0000673
so part of: LIPM
location: join(11047819..11047965,11051078..11051195,11056980..11057178,11058164..11058273,11059808..11059944,11060075..11060221,11063061..11063132,11064523..11064594,11067389..11067658)
location: region:11047819-11067658:1
so has part: feature:11047819-11047965:1:exon
so has part: feature:11051078-11051195:1:exon
so has part: feature:11056980-11057178:1:exon
so has part: feature:11058164-11058273:1:exon
so has part: feature:11059808-11059944:1:exon
so has part: feature:11060075-11060221:1:exon
so has part: feature:11063061-11063132:1:exon
so has part: feature:11064523-11064594:1:exon
so has part: feature:11067389-11067658:1:exon

XP_019808773.1
type: Protein
SIO_000068: ncbiprotein

position:11047819:1
position: 11047819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11067658:1
position: 11067658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11047819-11047965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11051078-11051195:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11056980-11057178:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11058164-11058273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11059808-11059944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11060075-11060221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11063061-11063132:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11064523-11064594:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11067389-11067658:1:exon

ANKRD22
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ANKRD22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11068953..11097051)
location: region:11068953-11097051:-1
so has part: feature:11068953-11097051:-1:exon
subclass of: SO_0000010

109553242
type: Gene
SIO_000068: ncbigene

position:11068953:-1
position: 11068953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11097051:-1
position: 11097051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11068953-11097051:-1:exon

ANKRD22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ANKRD22
product: ankyrin repeat domain 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 19 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_019953223.1
SIO_010081: ANKRD22
subclass of: SO_0000673
so part of: ANKRD22
location: complement(join(11068953..11070372,11070836..11070934,11074111..11074188,11079398..11079505,11081502..11081693,11096818..11097051))
location: region:11068953-11097051:-1
so has part: feature:11096818-11097051:-1:exon
so has part: feature:11081502-11081693:-1:exon
so has part: feature:11079398-11079505:-1:exon
so has part: feature:11074111-11074188:-1:exon
so has part: feature:11070836-11070934:-1:exon
so has part: feature:11068953-11070372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11096818-11097051:-1:exon

position:11096818:-1
position: 11096818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11081502-11081693:-1:exon

position:11081502:-1
position: 11081502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11081693:-1
position: 11081693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11079398-11079505:-1:exon

position:11079398:-1
position: 11079398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11079505:-1
position: 11079505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11074111-11074188:-1:exon

position:11074111:-1
position: 11074111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11074188:-1
position: 11074188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11070836-11070934:-1:exon

position:11070836:-1
position: 11070836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11070934:-1
position: 11070934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11068953-11070372:-1:exon

position:11070372:-1
position: 11070372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKRD22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ANKRD22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 22
translation: MGILYSEPICQAAYQNDLGQVWRWVREDGSYINIQDGFNGDTPLICACRRGHMRIVSFLLRRNADVNLKNQKQRTCLHYAVKKRFTFFDYLLIILLMPVLLIGYFLMVSKTKQNEALVRMLLNAGVDVNAIDCYGCTALHYACEMKNQTLIPLLLEARANPTIKNKDGETSLDIAQRLKFSQIELMLRKAS
SIO_010081: ANKRD22
subclass of: SO_0000673
so part of: ANKRD22
location: complement(join(11070295..11070372,11070836..11070934,11074111..11074188,11079398..11079505,11081502..11081693,11096818..11096838))
location: region:11070295-11096838:-1
so has part: feature:11096818-11096838:-1:exon
so has part: feature:11081502-11081693:-1:exon
so has part: feature:11079398-11079505:-1:exon
so has part: feature:11074111-11074188:-1:exon
so has part: feature:11070836-11070934:-1:exon
so has part: feature:11070295-11070372:-1:exon

XP_019808782.1
type: Protein
SIO_000068: ncbiprotein

position:11070295:-1
position: 11070295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11096838:-1
position: 11096838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11096818-11096838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11081502-11081693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11079398-11079505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11074111-11074188:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11070836-11070934:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11070295-11070372:-1:exon

STAMBPL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: STAMBPL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11124077..11177119
location: region:11124077-11177119:1
so has part: feature:11124077-11177119:1:exon
subclass of: SO_0000010

109553140
type: Gene
SIO_000068: ncbigene

position:11124077:1
position: 11124077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11177119:1
position: 11177119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11124077-11177119:1:exon

STAMBPL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: STAMBPL1
product: STAM binding protein like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 11 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 191 samples with support for all annotated introns
transcript id: XM_019953079.1
SIO_010081: STAMBPL1
subclass of: SO_0000673
so part of: STAMBPL1
location: join(11124077..11124418,11154870..11154952,11158319..11158536,11162207..11162282,11164452..11164547,11166935..11167292,11168959..11169083,11171536..11171673,11173617..11173729,11175467..11175566,11176802..11177119)
location: region:11124077-11177119:1
so has part: feature:11124077-11124418:1:exon
so has part: feature:11154870-11154952:1:exon
so has part: feature:11158319-11158536:1:exon
so has part: feature:11162207-11162282:1:exon
so has part: feature:11164452-11164547:1:exon
so has part: feature:11166935-11167292:1:exon
so has part: feature:11168959-11169083:1:exon
so has part: feature:11171536-11171673:1:exon
so has part: feature:11173617-11173729:1:exon
so has part: feature:11175467-11175566:1:exon
so has part: feature:11176802-11177119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11124077-11124418:1:exon

position:11124418:1
position: 11124418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11154870-11154952:1:exon

position:11154870:1
position: 11154870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11154952:1
position: 11154952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11158319-11158536:1:exon

position:11158319:1
position: 11158319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11158536:1
position: 11158536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11162207-11162282:1:exon

position:11162207:1
position: 11162207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11162282:1
position: 11162282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11164452-11164547:1:exon

position:11164452:1
position: 11164452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11164547:1
position: 11164547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11166935-11167292:1:exon

position:11166935:1
position: 11166935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11167292:1
position: 11167292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11168959-11169083:1:exon

position:11168959:1
position: 11168959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11169083:1
position: 11169083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11171536-11171673:1:exon

position:11171536:1
position: 11171536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11171673:1
position: 11171673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11173617-11173729:1:exon

position:11173617:1
position: 11173617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11173729:1
position: 11173729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11175467-11175566:1:exon

position:11175467:1
position: 11175467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11175566:1
position: 11175566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11176802-11177119:1:exon

position:11176802:1
position: 11176802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STAMBPL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: STAMBPL1
product: STAM binding protein like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 10 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 204 samples with support for all annotated introns
transcript id: XM_019953077.1
SIO_010081: STAMBPL1
subclass of: SO_0000673
so part of: STAMBPL1
location: join(11124483..11124658,11154870..11154952,11158319..11158536,11162207..11162282,11164452..11164547,11166935..11167292,11168959..11169083,11171536..11171673,11173617..11173729,11175467..11175566,11176802..11177119)
location: region:11124483-11177119:1
so has part: feature:11124483-11124658:1:exon
so has part: feature:11154870-11154952:1:exon
so has part: feature:11158319-11158536:1:exon
so has part: feature:11162207-11162282:1:exon
so has part: feature:11164452-11164547:1:exon
so has part: feature:11166935-11167292:1:exon
so has part: feature:11168959-11169083:1:exon
so has part: feature:11171536-11171673:1:exon
so has part: feature:11173617-11173729:1:exon
so has part: feature:11175467-11175566:1:exon
so has part: feature:11176802-11177119:1:exon

position:11124483:1
position: 11124483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11124483-11124658:1:exon

position:11124658:1
position: 11124658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11154870-11154952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11158319-11158536:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11162207-11162282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11164452-11164547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11166935-11167292:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11168959-11169083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11171536-11171673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11173617-11173729:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11175467-11175566:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11176802-11177119:1:exon

STAMBPL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: STAMBPL1
product: STAM binding protein like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 10 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_019953080.1
SIO_010081: STAMBPL1
subclass of: SO_0000673
so part of: STAMBPL1
location: join(11124968..11125382,11154870..11154952,11158319..11158536,11162207..11162282,11164452..11164547,11166935..11167292,11168959..11169083,11171536..11171673,11173617..11173729,11175467..11175566,11176802..11177119)
location: region:11124968-11177119:1
so has part: feature:11124968-11125382:1:exon
so has part: feature:11154870-11154952:1:exon
so has part: feature:11158319-11158536:1:exon
so has part: feature:11162207-11162282:1:exon
so has part: feature:11164452-11164547:1:exon
so has part: feature:11166935-11167292:1:exon
so has part: feature:11168959-11169083:1:exon
so has part: feature:11171536-11171673:1:exon
so has part: feature:11173617-11173729:1:exon
so has part: feature:11175467-11175566:1:exon
so has part: feature:11176802-11177119:1:exon

position:11124968:1
position: 11124968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11124968-11125382:1:exon

position:11125382:1
position: 11125382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11154870-11154952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11158319-11158536:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11162207-11162282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11164452-11164547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11166935-11167292:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11168959-11169083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11171536-11171673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11173617-11173729:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11175467-11175566:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11176802-11177119:1:exon

STAMBPL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: STAMBPL1
product: STAM binding protein like 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 10 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_019953081.1
SIO_010081: STAMBPL1
subclass of: SO_0000673
so part of: STAMBPL1
location: join(11133224..11133376,11154870..11154952,11158319..11158536,11162207..11162282,11164452..11164547,11166935..11167292,11168959..11169083,11171536..11171673,11173617..11173729,11175467..11175566,11176802..11177119)
location: region:11133224-11177119:1
so has part: feature:11133224-11133376:1:exon
so has part: feature:11154870-11154952:1:exon
so has part: feature:11158319-11158536:1:exon
so has part: feature:11162207-11162282:1:exon
so has part: feature:11164452-11164547:1:exon
so has part: feature:11166935-11167292:1:exon
so has part: feature:11168959-11169083:1:exon
so has part: feature:11171536-11171673:1:exon
so has part: feature:11173617-11173729:1:exon
so has part: feature:11175467-11175566:1:exon
so has part: feature:11176802-11177119:1:exon

position:11133224:1
position: 11133224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11133224-11133376:1:exon

position:11133376:1
position: 11133376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11154870-11154952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11158319-11158536:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11162207-11162282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11164452-11164547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11166935-11167292:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11168959-11169083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11171536-11171673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11173617-11173729:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11175467-11175566:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11176802-11177119:1:exon

STAMBPL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: STAMBPL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMSH-like protease
translation: MDQPLTVNSLKKLAAMPDHTDVSLTPEERVRALSKLGGNITINEDITPRRYFRSGVEMERMASVYLEEGNLESAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDELKKDLLKKYNVEYQEYLQSKNKYKAEILKKLEXQRLIEAERKRIAQMRQQQLESEQFSIFEDQLKKQELARSQLRSQETPALSEQIDGSALSCFSTHQNSSLLNVLADQSSKSDATSYAGHSPPVNRALKPAASLSAVQNLVVEGLRCVVLSRDLCHRFLLLAESNTVRGIETCGILCGKLTHNEFTITHLIVPKQSAGPDYCDVENVEELFSVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTDAGMLEVSACKKKGFHPHTKDPRLFSVCRHVLVKDIKIIVLDLR
SIO_010081: STAMBPL1
subclass of: SO_0000673
so part of: STAMBPL1
location: join(11154923..11154952,11158319..11158536,11162207..11162282,11164452..11164547,11166935..11167292,11168959..11169083,11171536..11171673,11173617..11173729,11175467..11175566,11176802..11176858)
location: region:11154923-11176858:1
so has part: feature:11154923-11154952:1:exon
so has part: feature:11158319-11158536:1:exon
so has part: feature:11162207-11162282:1:exon
so has part: feature:11164452-11164547:1:exon
so has part: feature:11166935-11167292:1:exon
so has part: feature:11168959-11169083:1:exon
so has part: feature:11171536-11171673:1:exon
so has part: feature:11173617-11173729:1:exon
so has part: feature:11175467-11175566:1:exon
so has part: feature:11176802-11176858:1:exon

XP_019808636.1
type: Protein
SIO_000068: ncbiprotein

position:11154923:1
position: 11154923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11176858:1
position: 11176858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11154923-11154952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11158319-11158536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11162207-11162282:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11164452-11164547:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11166935-11167292:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11168959-11169083:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11171536-11171673:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11173617-11173729:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11175467-11175566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11176802-11176858:1:exon

STAMBPL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: STAMBPL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMSH-like protease
translation: MDQPLTVNSLKKLAAMPDHTDVSLTPEERVRALSKLGGNITINEDITPRRYFRSGVEMERMASVYLEEGNLESAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDELKKDLLKKYNVEYQEYLQSKNKYKAEILKKLEXQRLIEAERKRIAQMRQQQLESEQFSIFEDQLKKQELARSQLRSQETPALSEQIDGSALSCFSTHQNSSLLNVLADQSSKSDATSYAGHSPPVNRALKPAASLSAVQNLVVEGLRCVVLSRDLCHRFLLLAESNTVRGIETCGILCGKLTHNEFTITHLIVPKQSAGPDYCDVENVEELFSVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTDAGMLEVSACKKKGFHPHTKDPRLFSVCRHVLVKDIKIIVLDLR
SIO_010081: STAMBPL1
subclass of: SO_0000673
so part of: STAMBPL1
location: join(11154923..11154952,11158319..11158536,11162207..11162282,11164452..11164547,11166935..11167292,11168959..11169083,11171536..11171673,11173617..11173729,11175467..11175566,11176802..11176858)
location: region:11154923-11176858:1
so has part: feature:11154923-11154952:1:exon
so has part: feature:11158319-11158536:1:exon
so has part: feature:11162207-11162282:1:exon
so has part: feature:11164452-11164547:1:exon
so has part: feature:11166935-11167292:1:exon
so has part: feature:11168959-11169083:1:exon
so has part: feature:11171536-11171673:1:exon
so has part: feature:11173617-11173729:1:exon
so has part: feature:11175467-11175566:1:exon
so has part: feature:11176802-11176858:1:exon

XP_019808638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11154923-11154952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11158319-11158536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11162207-11162282:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11164452-11164547:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11166935-11167292:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11168959-11169083:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11171536-11171673:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11173617-11173729:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11175467-11175566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11176802-11176858:1:exon

STAMBPL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: STAMBPL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMSH-like protease
translation: MDQPLTVNSLKKLAAMPDHTDVSLTPEERVRALSKLGGNITINEDITPRRYFRSGVEMERMASVYLEEGNLESAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDELKKDLLKKYNVEYQEYLQSKNKYKAEILKKLEXQRLIEAERKRIAQMRQQQLESEQFSIFEDQLKKQELARSQLRSQETPALSEQIDGSALSCFSTHQNSSLLNVLADQSSKSDATSYAGHSPPVNRALKPAASLSAVQNLVVEGLRCVVLSRDLCHRFLLLAESNTVRGIETCGILCGKLTHNEFTITHLIVPKQSAGPDYCDVENVEELFSVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTDAGMLEVSACKKKGFHPHTKDPRLFSVCRHVLVKDIKIIVLDLR
SIO_010081: STAMBPL1
subclass of: SO_0000673
so part of: STAMBPL1
location: join(11154923..11154952,11158319..11158536,11162207..11162282,11164452..11164547,11166935..11167292,11168959..11169083,11171536..11171673,11173617..11173729,11175467..11175566,11176802..11176858)
location: region:11154923-11176858:1
so has part: feature:11154923-11154952:1:exon
so has part: feature:11158319-11158536:1:exon
so has part: feature:11162207-11162282:1:exon
so has part: feature:11164452-11164547:1:exon
so has part: feature:11166935-11167292:1:exon
so has part: feature:11168959-11169083:1:exon
so has part: feature:11171536-11171673:1:exon
so has part: feature:11173617-11173729:1:exon
so has part: feature:11175467-11175566:1:exon
so has part: feature:11176802-11176858:1:exon

XP_019808639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11154923-11154952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11158319-11158536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11162207-11162282:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11164452-11164547:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11166935-11167292:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11168959-11169083:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11171536-11171673:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11173617-11173729:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11175467-11175566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11176802-11176858:1:exon

STAMBPL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: STAMBPL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMSH-like protease
translation: MDQPLTVNSLKKLAAMPDHTDVSLTPEERVRALSKLGGNITINEDITPRRYFRSGVEMERMASVYLEEGNLESAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDELKKDLLKKYNVEYQEYLQSKNKYKAEILKKLEXQRLIEAERKRIAQMRQQQLESEQFSIFEDQLKKQELARSQLRSQETPALSEQIDGSALSCFSTHQNSSLLNVLADQSSKSDATSYAGHSPPVNRALKPAASLSAVQNLVVEGLRCVVLSRDLCHRFLLLAESNTVRGIETCGILCGKLTHNEFTITHLIVPKQSAGPDYCDVENVEELFSVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTDAGMLEVSACKKKGFHPHTKDPRLFSVCRHVLVKDIKIIVLDLR
SIO_010081: STAMBPL1
subclass of: SO_0000673
so part of: STAMBPL1
location: join(11154923..11154952,11158319..11158536,11162207..11162282,11164452..11164547,11166935..11167292,11168959..11169083,11171536..11171673,11173617..11173729,11175467..11175566,11176802..11176858)
location: region:11154923-11176858:1
so has part: feature:11154923-11154952:1:exon
so has part: feature:11158319-11158536:1:exon
so has part: feature:11162207-11162282:1:exon
so has part: feature:11164452-11164547:1:exon
so has part: feature:11166935-11167292:1:exon
so has part: feature:11168959-11169083:1:exon
so has part: feature:11171536-11171673:1:exon
so has part: feature:11173617-11173729:1:exon
so has part: feature:11175467-11175566:1:exon
so has part: feature:11176802-11176858:1:exon

XP_019808640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11154923-11154952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11158319-11158536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11162207-11162282:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11164452-11164547:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11166935-11167292:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11168959-11169083:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11171536-11171673:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11173617-11173729:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11175467-11175566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11176802-11176858:1:exon

ACTA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ACTA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11189333..11207058)
location: region:11189333-11207058:-1
so has part: feature:11189333-11207058:-1:exon
subclass of: SO_0000010

109579170
type: Gene
SIO_000068: ncbigene

position:11189333:-1
position: 11189333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11207058:-1
position: 11207058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11189333-11207058:-1:exon

ACTA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ACTA2
product: actin, alpha 2, smooth muscle, aorta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 778 ESTs, 137 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 264 samples with support for all annotated introns
transcript id: XM_019988723.1
SIO_010081: ACTA2
subclass of: SO_0000673
so part of: ACTA2
location: complement(join(11189333..11189625,11192237..11192418,11193694..11193885,11195677..11195838,11196214..11196298,11198604..11198714,11201648..11201776,11203128..11203282,11206581..11207058))
location: region:11189333-11207058:-1
so has part: feature:11206581-11207058:-1:exon
so has part: feature:11203128-11203282:-1:exon
so has part: feature:11201648-11201776:-1:exon
so has part: feature:11198604-11198714:-1:exon
so has part: feature:11196214-11196298:-1:exon
so has part: feature:11195677-11195838:-1:exon
so has part: feature:11193694-11193885:-1:exon
so has part: feature:11192237-11192418:-1:exon
so has part: feature:11189333-11189625:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11206581-11207058:-1:exon

position:11206581:-1
position: 11206581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11203128-11203282:-1:exon

position:11203128:-1
position: 11203128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11203282:-1
position: 11203282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11201648-11201776:-1:exon

position:11201648:-1
position: 11201648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11201776:-1
position: 11201776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11198604-11198714:-1:exon

position:11198604:-1
position: 11198604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11198714:-1
position: 11198714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11196214-11196298:-1:exon

position:11196214:-1
position: 11196214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11196298:-1
position: 11196298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11195677-11195838:-1:exon

position:11195677:-1
position: 11195677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11195838:-1
position: 11195838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11193694-11193885:-1:exon

position:11193694:-1
position: 11193694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11193885:-1
position: 11193885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11192237-11192418:-1:exon

position:11192237:-1
position: 11192237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11192418:-1
position: 11192418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11189333-11189625:-1:exon

position:11189625:-1
position: 11189625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACTA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ACTA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin, aortic smooth muscle
translation: MSRAVECGGKDPGLRPPRLESFVLRSLYGCVRLHRGLESVFVPCLGSQWEGNRPRGYITPPAFSFPEHHPERRSPAENFQGPCEAAPAEMCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF
SIO_010081: ACTA2
subclass of: SO_0000673
so part of: ACTA2
location: complement(join(11189482..11189625,11192237..11192418,11193694..11193885,11195677..11195838,11196214..11196298,11198604..11198714,11201648..11201776,11203128..11203282,11206581..11206821))
location: region:11189482-11206821:-1
so has part: feature:11206581-11206821:-1:exon
so has part: feature:11203128-11203282:-1:exon
so has part: feature:11201648-11201776:-1:exon
so has part: feature:11198604-11198714:-1:exon
so has part: feature:11196214-11196298:-1:exon
so has part: feature:11195677-11195838:-1:exon
so has part: feature:11193694-11193885:-1:exon
so has part: feature:11192237-11192418:-1:exon
so has part: feature:11189482-11189625:-1:exon

XP_019844282.1
type: Protein
SIO_000068: ncbiprotein

position:11189482:-1
position: 11189482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11206821:-1
position: 11206821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11206581-11206821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11203128-11203282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11201648-11201776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11198604-11198714:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11196214-11196298:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11195677-11195838:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11193694-11193885:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11192237-11192418:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11189482-11189625:-1:exon

FAS
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: FAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11240965..11275024
location: region:11240965-11275024:1
so has part: feature:11240965-11275024:1:exon
subclass of: SO_0000010

109579171
type: Gene
SIO_000068: ncbigene

position:11240965:1
position: 11240965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11275024:1
position: 11275024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11240965-11275024:1:exon

FAS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FAS
product: Fas cell surface death receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_019988724.1
SIO_010081: FAS
subclass of: SO_0000673
so part of: FAS
location: join(11240965..11241344,11254798..11254954,11264694..11264831,11266102..11266210,11269077..11269132,11269301..11269375,11271110..11271171,11272324..11272348,11273067..11275024)
location: region:11240965-11275024:1
so has part: feature:11240965-11241344:1:exon
so has part: feature:11254798-11254954:1:exon
so has part: feature:11264694-11264831:1:exon
so has part: feature:11266102-11266210:1:exon
so has part: feature:11269077-11269132:1:exon
so has part: feature:11269301-11269375:1:exon
so has part: feature:11271110-11271171:1:exon
so has part: feature:11272324-11272348:1:exon
so has part: feature:11273067-11275024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11240965-11241344:1:exon

position:11241344:1
position: 11241344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11254798-11254954:1:exon

position:11254798:1
position: 11254798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11254954:1
position: 11254954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11264694-11264831:1:exon

position:11264694:1
position: 11264694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11264831:1
position: 11264831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11266102-11266210:1:exon

position:11266102:1
position: 11266102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11266210:1
position: 11266210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11269077-11269132:1:exon

position:11269077:1
position: 11269077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11269132:1
position: 11269132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11269301-11269375:1:exon

position:11269301:1
position: 11269301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11269375:1
position: 11269375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11271110-11271171:1:exon

position:11271110:1
position: 11271110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11271171:1
position: 11271171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11272324-11272348:1:exon

position:11272324:1
position: 11272324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11272348:1
position: 11272348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11273067-11275024:1:exon

position:11273067:1
position: 11273067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 6
translation: MSGIWVHLSLIFISVSGPLSKGENAHMAGINSEGLKLNITEANSCQEGLYREHQFCCQPCPPGKRKNGDCKRDGDTPECVLCSEGNEYTDKSHHSDKCIRCSICDEEHGLEVEQNCTRTRNTKCRCKSNFFCNSSPCEHCNPCTTCEHGIIEKCTPTSNTKCKGSRSHANSLWALLILLIPIVLIIYKVAKSRERNKKNDYCNSAASNDEGRQLNLTDVDLGKYIPSIAEQMRITEVKEFVRKNGMEEAKIDDIMHDNVHETAEQKVQLLRNWYQSHGKKNAYCTLTKSLPKALAEKICDIVMKDITNERENANLQNENENLV
SIO_010081: FAS
subclass of: SO_0000673
so part of: FAS
location: join(11241315..11241344,11254798..11254954,11264694..11264831,11266102..11266210,11269077..11269132,11269301..11269375,11271110..11271171,11272324..11272348,11273067..11273386)
location: region:11241315-11273386:1
so has part: feature:11241315-11241344:1:exon
so has part: feature:11254798-11254954:1:exon
so has part: feature:11264694-11264831:1:exon
so has part: feature:11266102-11266210:1:exon
so has part: feature:11269077-11269132:1:exon
so has part: feature:11269301-11269375:1:exon
so has part: feature:11271110-11271171:1:exon
so has part: feature:11272324-11272348:1:exon
so has part: feature:11273067-11273386:1:exon

XP_019844283.1
type: Protein
SIO_000068: ncbiprotein

position:11241315:1
position: 11241315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11273386:1
position: 11273386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11241315-11241344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11254798-11254954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11264694-11264831:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11266102-11266210:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11269077-11269132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11269301-11269375:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11271110-11271171:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11272324-11272348:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11273067-11273386:1:exon

CH25H
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CH25H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11446869..11449077)
location: region:11446869-11449077:-1
so has part: feature:11446869-11449077:-1:exon
subclass of: SO_0000010

109553211
type: Gene
SIO_000068: ncbigene

position:11446869:-1
position: 11446869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11449077:-1
position: 11449077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11446869-11449077:-1:exon

CH25H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CH25H
product: cholesterol 25-hydroxylase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 32 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_019953196.1
SIO_010081: CH25H
subclass of: SO_0000673
so part of: CH25H
location: complement(join(11446869..11448357,11448828..11449077))
location: region:11446869-11449077:-1
so has part: feature:11448828-11449077:-1:exon
so has part: feature:11446869-11448357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11448828-11449077:-1:exon

position:11448828:-1
position: 11448828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11446869-11448357:-1:exon

position:11448357:-1
position: 11448357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CH25H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CH25H
product: cholesterol 25-hydroxylase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 32 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_019953195.1
SIO_010081: CH25H
subclass of: SO_0000673
so part of: CH25H
location: complement(join(11446869..11448357,11448755..11449077))
location: region:11446869-11449077:-1
so has part: feature:11448755-11449077:-1:exon
so has part: feature:11446869-11448357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11448755-11449077:-1:exon

position:11448755:-1
position: 11448755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11446869-11448357:-1:exon

CH25H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CH25H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cholesterol 25-hydroxylase
translation: MNSHNRSELHVLCSSGQLFLQPLWDRLRTWDALIQSPFFPVVFSITTYVGFCLPFVVLDVLCPWVPTLRRYKIHPDFSPSARQLLPCLGQTLYQHVVFVFPMTLLHWAVSPALLPAEAPELFQLVSHVALCLLLFDTEFFVWHLLHHKVPWLYRTFHKXHHQNSSPFALSTQYMSVGELFSLGVFDMVNVLLLQCHPLTSLTFHVVNIWLSVEDHSGYDFPWSTHRLVPFGWFGGVAHHDLHHSQFNCNFAPYFTHWDXILGTLRSAHAK
SIO_010081: CH25H
subclass of: SO_0000673
so part of: CH25H
location: complement(11447433..11448245)
location: region:11447433-11448245:-1
so has part: feature:11447433-11448245:-1:exon

XP_019808754.1
type: Protein
SIO_000068: ncbiprotein

position:11447433:-1
position: 11447433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11448245:-1
position: 11448245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11447433-11448245:-1:exon

CH25H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CH25H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cholesterol 25-hydroxylase
translation: MNSHNRSELHVLCSSGQLFLQPLWDRLRTWDALIQSPFFPVVFSITTYVGFCLPFVVLDVLCPWVPTLRRYKIHPDFSPSARQLLPCLGQTLYQHVVFVFPMTLLHWAVSPALLPAEAPELFQLVSHVALCLLLFDTEFFVWHLLHHKVPWLYRTFHKXHHQNSSPFALSTQYMSVGELFSLGVFDMVNVLLLQCHPLTSLTFHVVNIWLSVEDHSGYDFPWSTHRLVPFGWFGGVAHHDLHHSQFNCNFAPYFTHWDXILGTLRSAHAK
SIO_010081: CH25H
subclass of: SO_0000673
so part of: CH25H
location: complement(11447433..11448245)
location: region:11447433-11448245:-1
so has part: feature:11447433-11448245:-1:exon

XP_019808755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11447433-11448245:-1:exon

LOC109579143
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579143
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11457163..11459852
location: region:11457163-11459852:1
so has part: feature:11457163-11459852:1:exon
subclass of: SO_0000011

109579143
type: Gene
SIO_000068: ncbigene

position:11457163:1
position: 11457163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11459852:1
position: 11459852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11457163-11459852:1:exon

LOC109579143
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109579143
product: uncharacterized LOC109579143
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_002183783.1
SIO_010081: LOC109579143
subclass of: SO_0000673
so part of: LOC109579143
location: join(11457163..11458743,11458793..11459852)
location: region:11457163-11459852:1
so has part: feature:11457163-11458743:1:exon
so has part: feature:11458793-11459852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11457163-11458743:1:exon

position:11458743:1
position: 11458743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11458793-11459852:1:exon

position:11458793:1
position: 11458793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIPA
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LIPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11458964..11589063)
location: region:11458964-11589063:-1
so has part: feature:11458964-11589063:-1:exon
subclass of: SO_0000010

109579141
type: Gene
SIO_000068: ncbigene

position:11458964:-1
position: 11458964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11589063:-1
position: 11589063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11458964-11589063:-1:exon

LIPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LIPA
product: lipase A, lysosomal acid type, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 74 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_019988660.1
SIO_010081: LIPA
subclass of: SO_0000673
so part of: LIPA
location: complement(join(11458964..11460437,11461304..11461375,11470215..11470286,11471191..11471337,11473387..11473523,11476143..11476252,11477368..11477566,11494586..11494703,11497605..11497716,11588989..11589063))
location: region:11458964-11589063:-1
so has part: feature:11588989-11589063:-1:exon
so has part: feature:11497605-11497716:-1:exon
so has part: feature:11494586-11494703:-1:exon
so has part: feature:11477368-11477566:-1:exon
so has part: feature:11476143-11476252:-1:exon
so has part: feature:11473387-11473523:-1:exon
so has part: feature:11471191-11471337:-1:exon
so has part: feature:11470215-11470286:-1:exon
so has part: feature:11461304-11461375:-1:exon
so has part: feature:11458964-11460437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11588989-11589063:-1:exon

position:11588989:-1
position: 11588989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11497605-11497716:-1:exon

position:11497605:-1
position: 11497605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11497716:-1
position: 11497716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11494586-11494703:-1:exon

position:11494586:-1
position: 11494586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11494703:-1
position: 11494703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11477368-11477566:-1:exon

position:11477368:-1
position: 11477368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11477566:-1
position: 11477566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11476143-11476252:-1:exon

position:11476143:-1
position: 11476143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11476252:-1
position: 11476252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11473387-11473523:-1:exon

position:11473387:-1
position: 11473387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11473523:-1
position: 11473523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11471191-11471337:-1:exon

position:11471191:-1
position: 11471191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11471337:-1
position: 11471337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11470215-11470286:-1:exon

position:11470215:-1
position: 11470215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11470286:-1
position: 11470286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11461304-11461375:-1:exon

position:11461304:-1
position: 11461304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11461375:-1
position: 11461375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11458964-11460437:-1:exon

position:11460437:-1
position: 11460437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LIPA
product: lipase A, lysosomal acid type, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 75 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 213 samples with support for all annotated introns
transcript id: XM_019988659.1
SIO_010081: LIPA
subclass of: SO_0000673
so part of: LIPA
location: complement(join(11458964..11460437,11461304..11461375,11470215..11470286,11471191..11471337,11473387..11473523,11476143..11476252,11477368..11477566,11494586..11494703,11497605..11497716,11501348..11501546))
location: region:11458964-11501546:-1
so has part: feature:11501348-11501546:-1:exon
so has part: feature:11497605-11497716:-1:exon
so has part: feature:11494586-11494703:-1:exon
so has part: feature:11477368-11477566:-1:exon
so has part: feature:11476143-11476252:-1:exon
so has part: feature:11473387-11473523:-1:exon
so has part: feature:11471191-11471337:-1:exon
so has part: feature:11470215-11470286:-1:exon
so has part: feature:11461304-11461375:-1:exon
so has part: feature:11458964-11460437:-1:exon

position:11501546:-1
position: 11501546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11501348-11501546:-1:exon

position:11501348:-1
position: 11501348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11497605-11497716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11494586-11494703:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11477368-11477566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11476143-11476252:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11473387-11473523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11471191-11471337:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11470215-11470286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11461304-11461375:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11458964-11460437:-1:exon

LIPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LIPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal acid lipase/cholesteryl ester hydrolase
translation: MKMWLWGLLVCLVLGTLPSQASGWKQTPVDPETNMNVSEIISHWGFPSEEHLVVTADGYILCLNRIPHGRKNRSDKGPKPVVFLQHGLLADSSDWVTNLPNSSLGFILADAGFDVWMGNSRGNTWSRKHKTLSVSQDEFWAFSFDEMANYDLPASINFILNKTGQEQLYYVGHSQGTTIGFXAFSRIPELAKKIKMFFALAPVASTXFMTGPVVKLAQIPELFLKDLFGIKEFFPQNTFLKWLSTHMCTHVILKELCGNVFFVLCGFNERNLNMSRVAVYATHNPAGTSVQNMIHWLQVVKLHKFQAFDWGSSAKNYFHYNQSSPPLYNVKDMLVPTAXWSGGRDWLADDKDIVLLQMQISNLVYHKRIPEWEHLDFIWGLDAPWKLYNEIINLMRKYQ
SIO_010081: LIPA
subclass of: SO_0000673
so part of: LIPA
location: complement(join(11460204..11460437,11461304..11461375,11470215..11470286,11471191..11471337,11473387..11473523,11476143..11476252,11477368..11477566,11494586..11494703,11497605..11497715))
location: region:11460204-11497715:-1
so has part: feature:11497605-11497715:-1:exon
so has part: feature:11494586-11494703:-1:exon
so has part: feature:11477368-11477566:-1:exon
so has part: feature:11476143-11476252:-1:exon
so has part: feature:11473387-11473523:-1:exon
so has part: feature:11471191-11471337:-1:exon
so has part: feature:11470215-11470286:-1:exon
so has part: feature:11461304-11461375:-1:exon
so has part: feature:11460204-11460437:-1:exon

XP_019844218.1
type: Protein
SIO_000068: ncbiprotein

position:11460204:-1
position: 11460204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11497715:-1
position: 11497715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11497605-11497715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11494586-11494703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11477368-11477566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11476143-11476252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11473387-11473523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11471191-11471337:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11470215-11470286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11461304-11461375:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11460204-11460437:-1:exon

LIPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LIPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal acid lipase/cholesteryl ester hydrolase
translation: MKMWLWGLLVCLVLGTLPSQASGWKQTPVDPETNMNVSEIISHWGFPSEEHLVVTADGYILCLNRIPHGRKNRSDKGPKPVVFLQHGLLADSSDWVTNLPNSSLGFILADAGFDVWMGNSRGNTWSRKHKTLSVSQDEFWAFSFDEMANYDLPASINFILNKTGQEQLYYVGHSQGTTIGFXAFSRIPELAKKIKMFFALAPVASTXFMTGPVVKLAQIPELFLKDLFGIKEFFPQNTFLKWLSTHMCTHVILKELCGNVFFVLCGFNERNLNMSRVAVYATHNPAGTSVQNMIHWLQVVKLHKFQAFDWGSSAKNYFHYNQSSPPLYNVKDMLVPTAXWSGGRDWLADDKDIVLLQMQISNLVYHKRIPEWEHLDFIWGLDAPWKLYNEIINLMRKYQ
SIO_010081: LIPA
subclass of: SO_0000673
so part of: LIPA
location: complement(join(11460204..11460437,11461304..11461375,11470215..11470286,11471191..11471337,11473387..11473523,11476143..11476252,11477368..11477566,11494586..11494703,11497605..11497715))
location: region:11460204-11497715:-1
so has part: feature:11497605-11497715:-1:exon
so has part: feature:11494586-11494703:-1:exon
so has part: feature:11477368-11477566:-1:exon
so has part: feature:11476143-11476252:-1:exon
so has part: feature:11473387-11473523:-1:exon
so has part: feature:11471191-11471337:-1:exon
so has part: feature:11470215-11470286:-1:exon
so has part: feature:11461304-11461375:-1:exon
so has part: feature:11460204-11460437:-1:exon

XP_019844219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11497605-11497715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11494586-11494703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11477368-11477566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11476143-11476252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11473387-11473523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11471191-11471337:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11470215-11470286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11461304-11461375:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11460204-11460437:-1:exon

LOC109578971
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 11511576..11527659
location: region:11511576-11527659:1
so has part: feature:11511576-11527659:1:exon

109578971
type: Gene
SIO_000068: ncbigene

position:11511576:1
position: 11511576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11527659:1
position: 11527659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11511576-11527659:1:exon

LOC109578971
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578971
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578971
subclass of: SO_0000673
so part of: LOC109578971
location: 11511576..11511672
location: region:11511576-11511672:1
so has part: feature:11511576-11511672:1:exon

position:11511672:1
position: 11511672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11511576-11511672:1:exon

LOC109578971
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578971
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578971
subclass of: SO_0000673
so part of: LOC109578971
location: 11514808..11514945
location: region:11514808-11514945:1
so has part: feature:11514808-11514945:1:exon

position:11514808:1
position: 11514808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11514945:1
position: 11514945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11514808-11514945:1:exon

LOC109578971
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578971
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578971
subclass of: SO_0000673
so part of: LOC109578971
location: 11526924..11527659
location: region:11526924-11527659:1
so has part: feature:11526924-11527659:1:exon

position:11526924:1
position: 11526924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11526924-11527659:1:exon

IFIT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: IFIT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11535204..11542340
location: region:11535204-11542340:1
so has part: feature:11535204-11542340:1:exon
subclass of: SO_0000010

109579140
type: Gene
SIO_000068: ncbigene

position:11535204:1
position: 11535204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11542340:1
position: 11542340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11535204-11542340:1:exon

IFIT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: IFIT2
product: interferon induced protein with tetratricopeptide repeats 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_019988658.1
SIO_010081: IFIT2
subclass of: SO_0000673
so part of: IFIT2
location: join(11535204..11535534,11540594..11542340)
location: region:11535204-11542340:1
so has part: feature:11535204-11535534:1:exon
so has part: feature:11540594-11542340:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11535204-11535534:1:exon

position:11535534:1
position: 11535534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11540594-11542340:1:exon

position:11540594:1
position: 11540594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IFIT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: IFIT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein with tetratricopeptide repeats 2
translation: MSETTKNSLEHSLQQLKSHFTWNLVEGEHSLDDFEDRVCHQTEFQNSEFKATMCNIQAFIKHRRGQHQAALECLRQAEEXIQREHADQAEVRSLVTWGNHAWVYYHLGRFADAQLYVDKVKRVCQKFSSPYRIESPELDCEEGWTRLKCGRNQNERAKVCFEKALEKNPKNPEFASGLAIASYRLDNQPPSQNPINPLRQAIQLNPDNQYVKVLLALKLQKMNKKDEGERLVEEALEKAPLATDVIRGAAKLYRRKGDLDLAIELLRKALKCMPNNIYLHCHIGCCYRAKVLEVEKMGGEKEELQKLVRHAIDHLKRADESNGNFFRIGSYLACLHAQVGQYEEAEYYFQKEFSKELPPVAKQVLHLRYGNFQLYQRKCEDKAIHHFIQGVKINQGSKEGEKMKNKLQRFADIKLSKNRADPKALHLLAFLQELNEDMQPAEENSERCLDSGNLIPLASLAEE
SIO_010081: IFIT2
subclass of: SO_0000673
so part of: IFIT2
location: join(11535530..11535534,11540594..11541980)
location: region:11535530-11541980:1
so has part: feature:11535530-11535534:1:exon
so has part: feature:11540594-11541980:1:exon

XP_019844217.1
type: Protein
SIO_000068: ncbiprotein

position:11535530:1
position: 11535530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11541980:1
position: 11541980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11535530-11535534:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11540594-11541980:1:exon

IFIT3
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: IFIT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11550607..11561052
location: region:11550607-11561052:1
so has part: feature:11550607-11561052:1:exon
subclass of: SO_0000010

109579137
type: Gene
SIO_000068: ncbigene

position:11550607:1
position: 11550607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11561052:1
position: 11561052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11550607-11561052:1:exon

IFIT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: IFIT3
product: interferon induced protein with tetratricopeptide repeats 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 213 samples with support for all annotated introns
transcript id: XM_019988654.1
SIO_010081: IFIT3
subclass of: SO_0000673
so part of: IFIT3
location: join(11550607..11550703,11559121..11561052)
location: region:11550607-11561052:1
so has part: feature:11550607-11550703:1:exon
so has part: feature:11559121-11561052:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11550607-11550703:1:exon

position:11550703:1
position: 11550703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11559121-11561052:1:exon

position:11559121:1
position: 11559121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IFIT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: IFIT3
product: interferon induced protein with tetratricopeptide repeats 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019988655.1
SIO_010081: IFIT3
subclass of: SO_0000673
so part of: IFIT3
location: join(11550624..11550703,11553862..11553981,11559121..11561052)
location: region:11550624-11561052:1
so has part: feature:11550624-11550703:1:exon
so has part: feature:11553862-11553981:1:exon
so has part: feature:11559121-11561052:1:exon

position:11550624:1
position: 11550624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11550624-11550703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11553862-11553981:1:exon

position:11553862:1
position: 11553862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11553981:1
position: 11553981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11559121-11561052:1:exon

LOC109579139
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11550627..11584524
location: region:11550627-11584524:1
so has part: feature:11550627-11584524:1:exon
subclass of: SO_0000010

109579139
type: Gene
SIO_000068: ncbigene

position:11550627:1
position: 11550627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11584524:1
position: 11584524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11550627-11584524:1:exon

LOC109579139
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109579139
product: interferon-induced protein with tetratricopeptide repeats 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_019988657.1
SIO_010081: LOC109579139
subclass of: SO_0000673
so part of: LOC109579139
location: join(11550627..11550703,11575559..11575750,11580286..11584524)
location: region:11550627-11584524:1
so has part: feature:11550627-11550703:1:exon
so has part: feature:11575559-11575750:1:exon
so has part: feature:11580286-11584524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11550627-11550703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11575559-11575750:1:exon

position:11575559:1
position: 11575559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11575750:1
position: 11575750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11580286-11584524:1:exon

position:11580286:1
position: 11580286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IFIT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: IFIT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein with tetratricopeptide repeats 3 isoform X1
translation: MSEDKNSLEQILPQLRCHFTWNLFKKGSVSHDLEDRVCNQTEFLNSEFKATKYNLLAYIKHLKGQNEAALECLRQAEEWIQREHTDQAEVRSLVTWGNYAWVYYHLGRFADAQLYADKVKRVCQKFANPYSIECPELDCEEGWTLVKCGGKKIERAKVYFQKALEEKPNNPEFSSGLAIAMYYLDDRPEQQSSLEILKQAVELSPDNQYIKVLLALTLQKTNEQAEGEQLVVEALEKAPCQTDVLHSAAKFYRGKGDLDKAIGLLLRALESIPNNPYLYHQIACCYRAKVKQIQHTGESEASGKGEKIEELREHARNYVSKAIEKGLNPLHACSDEFLENEEYYQTAFSKELPSTKGQELHQHDCNPQEDREISEHTAVQCSLDSLSISTESTEKEKMKFQLQNIANNQLPQNVPYSWSLQGLIHKMNGDLLQAAECYEKALDHLLKNSPSGIGSIFLPATEREEGSEEMEQDADSSILRELPDP
SIO_010081: IFIT3
subclass of: SO_0000673
so part of: IFIT3
location: join(11550699..11550703,11559121..11560573)
location: region:11550699-11560573:1
so has part: feature:11550699-11550703:1:exon
so has part: feature:11559121-11560573:1:exon

XP_019844213.1
type: Protein
SIO_000068: ncbiprotein

position:11550699:1
position: 11550699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11560573:1
position: 11560573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11550699-11550703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11559121-11560573:1:exon

IFIT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: IFIT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein with tetratricopeptide repeats 3 isoform X2
translation: MSEDKNSLEQILPQLRCHFTWNLFKKGSVSHDLEDRVCNQTEFLNSEFKATKYNLLAYIKHLKGQNEAALECLRQAEEWIQREHTDQAEVRSLVTWGNYAWVYYHLGRFADAQLYADKVKRVCQKFANPYSIECPELDCEEGWTLVKCGGKKIERAKVYFQKALEEKPNNPEFSSGLAIAMYYLDDRPEQQSSLEILKQAVELSPDNQYIKVLLALTLQKTNEQAEGEQLVVEALEKAPCQTDVLHSAAKFYRGKGDLDKAIGLLLRALESIPNNPYLYHQIACCYRAKVKQIQHTGESEASGKGEKIEELREHARNYVSKAIEKGLNPLHACSDEFLENEEYYQTAFSKELPSTKGQELHQHDCNPQEDREISEHTAVQCSLDSLSISTESTEKEKMKFQLQNIANNQLPQNVPYSWSLQGLIHKMNGDLLQAAECYEKALDHLLKNSPSGIGSIFLPATEREEGSEEMEQDADSSILRELPDP
SIO_010081: IFIT3
subclass of: SO_0000673
so part of: IFIT3
location: join(11553977..11553981,11559121..11560573)
location: region:11553977-11560573:1
so has part: feature:11553977-11553981:1:exon
so has part: feature:11559121-11560573:1:exon

XP_019844214.1
type: Protein
SIO_000068: ncbiprotein

position:11553977:1
position: 11553977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11553977-11553981:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11559121-11560573:1:exon

LOC109579139
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109579139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein with tetratricopeptide repeats 1-like
translation: MSYKADEDQLKDKLLLLRCHFTWDMIIAETEIPDLENRVLEEIMFLDIKYNVGIYNLLAYVKHLRGQNEEALKSLQKAEDLSQQEHANQSEVRSLVTWGNYAWLHYHMGQQAEAQIYLDKVKNTCRKLGNSSSYRMACPQMDCEEGWALLKCGGKNYERAKVCFEKALEVDPENPEFSTGYAIVVYRLEGFNKAQISAEFCLNTLKQAVKLNPNDAYIKALLGLKLQDVEQEAEGEKYIKEALTNASSKAYVFRYAAKFYRRKGVLDEALRLSKLALEETPSSAFLHHQTGLCYKSQISQIKFATNCQPKGQDKENINRIIPLAIHHLERAVQLKPTFELAYTSLAEMYAEAGDHRKADDTFQKVLCMKALDKEVLQHIHLHYGRFLEFHKKSEVDAISHYLKAIKIESPSTDRDKSINSLTKLASKKLRRNPSDIESLSILGFIHKVKGEMNEALEYYEQALRLAPGLENSAVIPRH
SIO_010081: LOC109579139
subclass of: SO_0000673
so part of: LOC109579139
location: join(11575746..11575750,11580286..11581717)
location: region:11575746-11581717:1
so has part: feature:11575746-11575750:1:exon
so has part: feature:11580286-11581717:1:exon

XP_019844216.1
type: Protein
SIO_000068: ncbiprotein

position:11575746:1
position: 11575746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11581717:1
position: 11581717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11575746-11575750:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11580286-11581717:1:exon

LOC109579142
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579142
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 11581863..11585466
location: region:11581863-11585466:1
so has part: feature:11581863-11585466:1:exon

109579142
type: Gene
SIO_000068: ncbigene

position:11581863:1
position: 11581863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11585466:1
position: 11585466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11581863-11585466:1:exon

LOC109579142
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: LOC109579142
product: eukaryotic translation initiation factor 4E-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_002183782.1
SIO_010081: LOC109579142
so part of: LOC109579142
location: join(11581863..11582358,11582486..11585466)
location: region:11581863-11585466:1
so has part: feature:11581863-11582358:1:exon
so has part: feature:11582486-11585466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11581863-11582358:1:exon

position:11582358:1
position: 11582358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11582486-11585466:1:exon

position:11582486:1
position: 11582486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IFIT5
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: IFIT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11588967..11599087
location: region:11588967-11599087:1
so has part: feature:11588967-11599087:1:exon
subclass of: SO_0000010

109579138
type: Gene
SIO_000068: ncbigene

position:11588967:1
position: 11588967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11599087:1
position: 11599087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11588967-11599087:1:exon

IFIT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: IFIT5
product: interferon induced protein with tetratricopeptide repeats 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 93 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 264 samples with support for all annotated introns
transcript id: XM_019988656.1
SIO_010081: IFIT5
subclass of: SO_0000673
so part of: IFIT5
location: join(11588967..11589300,11596118..11599087)
location: region:11588967-11599087:1
so has part: feature:11588967-11589300:1:exon
so has part: feature:11596118-11599087:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11588967-11589300:1:exon

position:11589300:1
position: 11589300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11596118-11599087:1:exon

position:11596118:1
position: 11596118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IFIT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: IFIT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein with tetratricopeptide repeats 5
translation: MSEIPKDCLKTILLELECHFTWNLLKEDIDLFDVEDTIGQQLEFLTTKSRLTLYNLLAYVKHLKGQNEDALKCLKQAEEIIRREHSDKEGVRSLVTWGNYAWVYYDMGQLKEAQKYIGKIGSVCKTLSSPSDYKLERPEIDCEKGWALLKFGGKYYQKAKAAFEKALEAEPDNPEFNIGYAITVYRLDDSDREGSIKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYIEEILDQISAQPYVLRYAAKFYRRKNSWDKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQIKKATRNRPKGKDKLKVDELITSAISHFKAAVERDSMFAFAYTDLANMYAEGGQYSNAEDIFQKALRLENITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSSLRPKLTSALKKLATKRLGYNASDVQSLSALGFVYKLEGEKRQAAEYYERAQKIDPENAEFLTALCELRLSI
SIO_010081: IFIT5
subclass of: SO_0000673
so part of: IFIT5
location: join(11589296..11589300,11596118..11597561)
location: region:11589296-11597561:1
so has part: feature:11589296-11589300:1:exon
so has part: feature:11596118-11597561:1:exon

XP_019844215.1
type: Protein
SIO_000068: ncbiprotein

position:11589296:1
position: 11589296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11597561:1
position: 11597561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11589296-11589300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11596118-11597561:1:exon

SLC16A12
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: SLC16A12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11610202..11653795)
location: region:11610202-11653795:-1
so has part: feature:11610202-11653795:-1:exon
subclass of: SO_0000010

109553154
type: Gene
SIO_000068: ncbigene

position:11610202:-1
position: 11610202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11653795:-1
position: 11653795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11610202-11653795:-1:exon

SLC16A12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SLC16A12
product: solute carrier family 16 member 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019953109.1
SIO_010081: SLC16A12
subclass of: SO_0000673
so part of: SLC16A12
location: complement(join(11610202..11613007,11616489..11616748,11619214..11619793,11621606..11621749,11624446..11624549,11632788..11633036,11652696..11652894,11653728..11653795))
location: region:11610202-11653795:-1
so has part: feature:11653728-11653795:-1:exon
so has part: feature:11652696-11652894:-1:exon
so has part: feature:11632788-11633036:-1:exon
so has part: feature:11624446-11624549:-1:exon
so has part: feature:11621606-11621749:-1:exon
so has part: feature:11619214-11619793:-1:exon
so has part: feature:11616489-11616748:-1:exon
so has part: feature:11610202-11613007:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11653728-11653795:-1:exon

position:11653728:-1
position: 11653728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11652696-11652894:-1:exon

position:11652696:-1
position: 11652696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11652894:-1
position: 11652894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11632788-11633036:-1:exon

position:11632788:-1
position: 11632788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11633036:-1
position: 11633036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11624446-11624549:-1:exon

position:11624446:-1
position: 11624446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11624549:-1
position: 11624549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11621606-11621749:-1:exon

position:11621606:-1
position: 11621606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11621749:-1
position: 11621749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11619214-11619793:-1:exon

position:11619214:-1
position: 11619214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11619793:-1
position: 11619793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11616489-11616748:-1:exon

position:11616489:-1
position: 11616489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11616748:-1
position: 11616748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11610202-11613007:-1:exon

position:11613007:-1
position: 11613007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC16A12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SLC16A12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 12
translation: MAKVKRARSTSPPDGGWGWMIVAGCFLVTICTRAVTRCISIFFVEFQTYFSQDYAQTAWIHSIVDCVTMLCAPLGSVVSNHFSCQVGIMLGGLLASTGLILGSFATSLKHLYLTLGVLTGLGFALCYSPAIAMVGKYFSRRKALAYGISLSGSGIGIFILAPVVQLLIEQFSWRGALLILGGFVLNLCVCGALMRPITLKEDQTTPEQNHVCRTQTQDFKQASPCSTWTKEWVQTCLCGSLQQEYSFLLMSDFVVLAVSVLFMAYGCSPLFVYFVPYALSVGVTHQQAAFLMSILGVIDIIGNITFGWLTDRRCLKNYQYVCYLFAIGLDGLCYLCLPMLQSLPLLVPFACTFGYFDGAYVTLIPVVTAEIVGTTSLSSALGVVYFLHAVPYLVSPPIAGWLVDTTGSYTAAFLLCGFSMIFSSLLLGFARVVKKMKRTQLRFLAKESDPKLQLWTNGSVAYSVARELDQRDGESVALAMLGSSPT
SIO_010081: SLC16A12
subclass of: SO_0000673
so part of: SLC16A12
location: complement(join(11612745..11613007,11616489..11616748,11619214..11619793,11621606..11621749,11624446..11624549,11632788..11632897))
location: region:11612745-11632897:-1
so has part: feature:11632788-11632897:-1:exon
so has part: feature:11624446-11624549:-1:exon
so has part: feature:11621606-11621749:-1:exon
so has part: feature:11619214-11619793:-1:exon
so has part: feature:11616489-11616748:-1:exon
so has part: feature:11612745-11613007:-1:exon

XP_019808668.1
type: Protein
SIO_000068: ncbiprotein

position:11612745:-1
position: 11612745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11632897:-1
position: 11632897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11632788-11632897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11624446-11624549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11621606-11621749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619214-11619793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11616489-11616748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11612745-11613007:-1:exon

LOC109553233
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109553233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11720605..11732726
location: region:11720605-11732726:1
so has part: feature:11720605-11732726:1:exon
subclass of: SO_0000011

109553233
type: Gene
SIO_000068: ncbigene

position:11720605:1
position: 11720605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11732726:1
position: 11732726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11720605-11732726:1:exon

LOC109553233
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109553233
product: uncharacterized LOC109553233, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_002179995.1
SIO_010081: LOC109553233
subclass of: SO_0000673
so part of: LOC109553233
location: join(11720605..11720798,11722136..11722428,11732474..11732726)
location: region:11720605-11732726:1
so has part: feature:11720605-11720798:1:exon
so has part: feature:11722136-11722428:1:exon
so has part: feature:11732474-11732726:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11720605-11720798:1:exon

position:11720798:1
position: 11720798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11722136-11722428:1:exon

position:11722136:1
position: 11722136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11722428:1
position: 11722428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11732474-11732726:1:exon

position:11732474:1
position: 11732474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109553233
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109553233
product: uncharacterized LOC109553233, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_002179994.1
SIO_010081: LOC109553233
subclass of: SO_0000673
so part of: LOC109553233
location: join(11720966..11721201,11722136..11722428,11725647..11725827,11726764..11726896,11732474..11732726)
location: region:11720966-11732726:1
so has part: feature:11720966-11721201:1:exon
so has part: feature:11722136-11722428:1:exon
so has part: feature:11725647-11725827:1:exon
so has part: feature:11726764-11726896:1:exon
so has part: feature:11732474-11732726:1:exon

position:11720966:1
position: 11720966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11720966-11721201:1:exon

position:11721201:1
position: 11721201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11722136-11722428:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11725647-11725827:1:exon

position:11725647:1
position: 11725647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11725827:1
position: 11725827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11726764-11726896:1:exon

position:11726764:1
position: 11726764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11726896:1
position: 11726896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11732474-11732726:1:exon

LOC109553233
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109553233
product: uncharacterized LOC109553233, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XR_002179993.1
SIO_010081: LOC109553233
subclass of: SO_0000673
so part of: LOC109553233
location: join(11720987..11721201,11722136..11722428,11732474..11732726)
location: region:11720987-11732726:1
so has part: feature:11720987-11721201:1:exon
so has part: feature:11722136-11722428:1:exon
so has part: feature:11732474-11732726:1:exon

position:11720987:1
position: 11720987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11720987-11721201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11722136-11722428:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11732474-11732726:1:exon

PANK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11762623..11819233)
location: region:11762623-11819233:-1
so has part: feature:11762623-11819233:-1:exon
subclass of: SO_0000010

109553047
type: Gene
SIO_000068: ncbigene

position:11762623:-1
position: 11762623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11819233:-1
position: 11819233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11762623-11819233:-1:exon

PANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PANK1
product: pantothenate kinase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 249 samples with support for all annotated introns
transcript id: XM_019952907.1
SIO_010081: PANK1
subclass of: SO_0000673
so part of: PANK1
location: complement(join(11762623..11764140,11768742..11768867,11772192..11772315,11772823..11772999,11778008..11778261,11787817..11788169,11818381..11819233))
location: region:11762623-11819233:-1
so has part: feature:11818381-11819233:-1:exon
so has part: feature:11787817-11788169:-1:exon
so has part: feature:11778008-11778261:-1:exon
so has part: feature:11772823-11772999:-1:exon
so has part: feature:11772192-11772315:-1:exon
so has part: feature:11768742-11768867:-1:exon
so has part: feature:11762623-11764140:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11818381-11819233:-1:exon

position:11818381:-1
position: 11818381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11787817-11788169:-1:exon

position:11787817:-1
position: 11787817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11788169:-1
position: 11788169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11778008-11778261:-1:exon

position:11778008:-1
position: 11778008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11778261:-1
position: 11778261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11772823-11772999:-1:exon

position:11772823:-1
position: 11772823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11772999:-1
position: 11772999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11772192-11772315:-1:exon

position:11772192:-1
position: 11772192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11772315:-1
position: 11772315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11768742-11768867:-1:exon

position:11768742:-1
position: 11768742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11768867:-1
position: 11768867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11762623-11764140:-1:exon

position:11764140:-1
position: 11764140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PANK1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: pantothenate kinase 1
translation: MLKLGGGGQDWACSVAGTGLGGEEASFEVARXGQRGKAGSGGPGWGFAGIPNSAPGXGMLQAGAGGPALEGQGVEEVGTPEGGGEERPARHPPAPALRLLNRKPQGGSGEIKTSENDLQRGRLSRGPRAAPPASGMGDHGXXXXXXFPHAPGTPAGVGAVAVNGLLHNGFPPVAPXCSRGPPRGGDASPPRLPLQPELQPQPPPPQHDSPAKKCRLRRRMDSGRKNRPPFPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELKNLTMCGRKGNLHFIRFPSCAMHKFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRTIADLQLHKLDELDCLIQGLLYVDSIGFNGKPECYYFENPTNPELCQKKPYCLDNPYPMLLVNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEMAAKGDSTNVDKLVKDIYGGDYERFGLQGSAVASSFGNMMSKEKRDSISKEDLARATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLELFKMPDDQ
SIO_010081: PANK1
subclass of: SO_0000673
so part of: PANK1
location: complement(join(11764081..11764140,11768742..11768867,11772192..11772315,11772823..11772999,11778008..11778261,11787817..11788169,11818381..11819063))
location: region:11764081-11819063:-1
so has part: feature:11818381-11819063:-1:exon
so has part: feature:11787817-11788169:-1:exon
so has part: feature:11778008-11778261:-1:exon
so has part: feature:11772823-11772999:-1:exon
so has part: feature:11772192-11772315:-1:exon
so has part: feature:11768742-11768867:-1:exon
so has part: feature:11764081-11764140:-1:exon

XP_019808466.1
type: Protein
SIO_000068: ncbiprotein

position:11764081:-1
position: 11764081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11819063:-1
position: 11819063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11818381-11819063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11787817-11788169:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11778008-11778261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11772823-11772999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11772192-11772315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11768742-11768867:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11764081-11764140:-1:exon

LOC109553048
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109553048
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11829353..11867069)
location: region:11829353-11867069:-1
so has part: feature:11829353-11867069:-1:exon
subclass of: SO_0000011

109553048
type: Gene
SIO_000068: ncbigene

position:11829353:-1
position: 11829353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11867069:-1
position: 11867069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11829353-11867069:-1:exon

LOC109553048
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109553048
product: uncharacterized LOC109553048
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XR_002179957.1
SIO_010081: LOC109553048
subclass of: SO_0000673
so part of: LOC109553048
location: complement(join(11829353..11830484,11846984..11847124,11861194..11861343,11866878..11867069))
location: region:11829353-11867069:-1
so has part: feature:11866878-11867069:-1:exon
so has part: feature:11861194-11861343:-1:exon
so has part: feature:11846984-11847124:-1:exon
so has part: feature:11829353-11830484:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11866878-11867069:-1:exon

position:11866878:-1
position: 11866878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11861194-11861343:-1:exon

position:11861194:-1
position: 11861194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11861343:-1
position: 11861343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11846984-11847124:-1:exon

position:11846984:-1
position: 11846984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11847124:-1
position: 11847124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11829353-11830484:-1:exon

position:11830484:-1
position: 11830484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIF20B
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: KIF20B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11867248..11951162
location: region:11867248-11951162:1
so has part: feature:11867248-11951162:1:exon
subclass of: SO_0000010

109553179
type: Gene
SIO_000068: ncbigene

position:11867248:1
position: 11867248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11951162:1
position: 11951162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11867248-11951162:1:exon

KIF20B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: KIF20B
product: kinesin family member 20B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019953157.1
SIO_010081: KIF20B
subclass of: SO_0000673
so part of: KIF20B
location: join(11867248..11867364,11873290..11873437,11881383..11881469,11881570..11881689,11882560..11882698,11883266..11883450,11886539..11886575,11887059..11887286,11888211..11888322,11889411..11889482,11889571..11889717,11890374..11890536,11891066..11891356,11895000..11895139,11895653..11895791,11896791..11897019,11897774..11897826,11899165..11899284,11904859..11905012,11913446..11914682,11915024..11915162,11920664..11920783,11922745..11922805,11930157..11930282,11931140..11931267,11934524..11934679,11938575..11938751,11940485..11940595,11942170..11942367,11944620..11944718,11945125..11945275,11949616..11949758,11950915..11951162)
location: region:11867248-11951162:1
so has part: feature:11867248-11867364:1:exon
so has part: feature:11873290-11873437:1:exon
so has part: feature:11881383-11881469:1:exon
so has part: feature:11881570-11881689:1:exon
so has part: feature:11882560-11882698:1:exon
so has part: feature:11883266-11883450:1:exon
so has part: feature:11886539-11886575:1:exon
so has part: feature:11887059-11887286:1:exon
so has part: feature:11888211-11888322:1:exon
so has part: feature:11889411-11889482:1:exon
so has part: feature:11889571-11889717:1:exon
so has part: feature:11890374-11890536:1:exon
so has part: feature:11891066-11891356:1:exon
so has part: feature:11895000-11895139:1:exon
so has part: feature:11895653-11895791:1:exon
so has part: feature:11896791-11897019:1:exon
so has part: feature:11897774-11897826:1:exon
so has part: feature:11899165-11899284:1:exon
so has part: feature:11904859-11905012:1:exon
so has part: feature:11913446-11914682:1:exon
so has part: feature:11915024-11915162:1:exon
so has part: feature:11920664-11920783:1:exon
so has part: feature:11922745-11922805:1:exon
so has part: feature:11930157-11930282:1:exon
so has part: feature:11931140-11931267:1:exon
so has part: feature:11934524-11934679:1:exon
so has part: feature:11938575-11938751:1:exon
so has part: feature:11940485-11940595:1:exon
so has part: feature:11942170-11942367:1:exon
so has part: feature:11944620-11944718:1:exon
so has part: feature:11945125-11945275:1:exon
so has part: feature:11949616-11949758:1:exon
so has part: feature:11950915-11951162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11867248-11867364:1:exon

position:11867364:1
position: 11867364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11873290-11873437:1:exon

position:11873290:1
position: 11873290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11873437:1
position: 11873437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11881383-11881469:1:exon

position:11881383:1
position: 11881383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11881469:1
position: 11881469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11881570-11881689:1:exon

position:11881570:1
position: 11881570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11881689:1
position: 11881689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11882560-11882698:1:exon

position:11882560:1
position: 11882560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11882698:1
position: 11882698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11883266-11883450:1:exon

position:11883266:1
position: 11883266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11883450:1
position: 11883450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11886539-11886575:1:exon

position:11886539:1
position: 11886539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11886575:1
position: 11886575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11887059-11887286:1:exon

position:11887059:1
position: 11887059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11887286:1
position: 11887286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11888211-11888322:1:exon

position:11888211:1
position: 11888211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11888322:1
position: 11888322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11889411-11889482:1:exon

position:11889411:1
position: 11889411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11889482:1
position: 11889482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11889571-11889717:1:exon

position:11889571:1
position: 11889571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11889717:1
position: 11889717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11890374-11890536:1:exon

position:11890374:1
position: 11890374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11890536:1
position: 11890536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11891066-11891356:1:exon

position:11891066:1
position: 11891066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11891356:1
position: 11891356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11895000-11895139:1:exon

position:11895000:1
position: 11895000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11895139:1
position: 11895139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:11895653-11895791:1:exon

position:11895653:1
position: 11895653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11895791:1
position: 11895791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:11896791-11897019:1:exon

position:11896791:1
position: 11896791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11897019:1
position: 11897019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:11897774-11897826:1:exon

position:11897774:1
position: 11897774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11897826:1
position: 11897826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:11899165-11899284:1:exon

position:11899165:1
position: 11899165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11899284:1
position: 11899284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:11904859-11905012:1:exon

position:11904859:1
position: 11904859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11905012:1
position: 11905012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:11913446-11914682:1:exon

position:11913446:1
position: 11913446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11914682:1
position: 11914682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:11915024-11915162:1:exon

position:11915024:1
position: 11915024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11915162:1
position: 11915162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:11920664-11920783:1:exon

position:11920664:1
position: 11920664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11920783:1
position: 11920783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:11922745-11922805:1:exon

position:11922745:1
position: 11922745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11922805:1
position: 11922805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:11930157-11930282:1:exon

position:11930157:1
position: 11930157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11930282:1
position: 11930282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:11931140-11931267:1:exon

position:11931140:1
position: 11931140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11931267:1
position: 11931267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:11934524-11934679:1:exon

position:11934524:1
position: 11934524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11934679:1
position: 11934679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:11938575-11938751:1:exon

position:11938575:1
position: 11938575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11938751:1
position: 11938751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:11940485-11940595:1:exon

position:11940485:1
position: 11940485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11940595:1
position: 11940595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:11942170-11942367:1:exon

position:11942170:1
position: 11942170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11942367:1
position: 11942367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:11944620-11944718:1:exon

position:11944620:1
position: 11944620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11944718:1
position: 11944718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:11945125-11945275:1:exon

position:11945125:1
position: 11945125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11945275:1
position: 11945275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:11949616-11949758:1:exon

position:11949616:1
position: 11949616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11949758:1
position: 11949758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:11950915-11951162:1:exon

position:11950915:1
position: 11950915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KIF20B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: KIF20B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF20B
translation: MGDSVHTRMESNLNQDGMSRPSYVFSADPLARPSEINFDGIKLDLSREFSLVASSTEANSSESKDYLQVCLRVRPFTQPEKEHESEGCVYILDSXTVVLKDPQYTTLGRLSEKSSGQMAQKFSFSKVFGPETTQKEFFQGCILQPVKDLLKGQSRLIFTYGLTNSGKTYTFQGTEENTGILPRTLNVLFDSLQERLYTKMNLKPHRSREYLRLSPDQEKEEVASKSALLRQIKEVVMHNDSYGALYGSLTNSLXIPEFEESMKDCEHSNLNIDINRKFSVWVSFFEIYNECIYDLFVPVSSKFQKRKTLRLSQDVKGYSFIKDLQWIQVSDAKEAYRLLKLGTKHQSVAFTKLNNASSRSHSIFTIRILQIEDSEIPHVIRVSELSLCDLAGSERSMRTQNEGERLRETGNINTSLLTLGKCISVLKNSEKSKFQQHVPFRESKLTHYFQSFFNGKGKICMIVNISQCSFTYDETLNVLKFSAIAQKVYVPDILNCSQEKSFGPVKSSQDESLDINNSDNKILNEKRSTISWESSLEDVVEDEDLVEDLEKAEEKQNVETEFIDEDLXDTLEDDKAFSSHAGKRKLLDLIEDLKKKLINERKEKLTLEFKIRDEVTQEFTQYLAQREADFKETLLQEREILEENAECRLAIFKDLIGKCDAQEEPKNEDHAIKDETEEGHNYVGIEDIIDSLQDDVTGIKKQAEIAHLYIASLADPQEAIACLEIKFNQVKAELAKTKEELIKTREEXKKRESESEINLNSLVQELEKSNKKIIMQNQRIQELMDKIDQKEDTINKFQNLKFHMENTCKGSDNVGNSSLIINSKLVCDETTEMSKDSKTKTYSGRKRLNENELQQDEPPAKKGLTHASPAITEDQKKSEEMQESISDEENIRLLQENNEELKTRLLTIENELKNEKEEKTELNKQIVSLQQELSSSEKKSLGFSIEXQQIQSSYDNVISELHVQKSINQEQKEXIMKLSEEIETARRNITNNVSQIKLMQAKIDELRRLDSVSQIANIDLLNLRDLSSCSQEDNLPNTQLHHLDNDXLISKQVKEHGIQELSRERSFHSXVEAIWEECKEIVKTSSKKTHQIEELEQQIEKLQAEVKDYTNENNRLKIEEREKKNQDDLLKEKDSLIQQLKEEVQEKTISLDIEVQHVVEGKRALSELMQDVTCYKVKIKELEAMLETQKDECSHSAKLEQEIMEKESIILKQERNLNECQANLKDSIQNARDLSEREVKLKEEIMQLTKNLQDAKQSLQLKEEEKERNWQETEKLKEELSASTTLTQNLKADLQRKEEDYAELKEKLADAKKQIEQVQKEISVMRDEEKLLRIKINELEKKKNQCSQEIDMKQRTIQQLKEQLNNQKVEEAIQQYERVCKDLSVKEKIIKDMQMTLEEQEQTQVEQDQVLEAKLEETERLATELEEWKEKYKDLEAKHNQSSNKEFEDNTDVLNTKLSKLQDELQESEQKHEAERKKWLEEKMMLITQAKEAENLRNKEMKKYAEDREHCLKQQNEMEILKGQLAEKDGNLQQWREERDQLVAALEIQLKALISSNVQKDNEIEQLKKITSEASKTEKQTIDIHLTQMSSTDPGRVEIEPQSTSFEISRGEVEDGSVVLDSCEVSTENNQSTRFPKPELEIQFTPLQPNRMAVKHPGCTSPVTVKIPKARKRKSHEMEEDFVKFENKKNATPRINLKSPVSEHRNSFKKEQKVSIRPSSKKTYSLRSHASTVGVNGSAKKKEGTLQKFGDFLQHSPTILQSKAKKIIETMSSSKFSNVEVSKENVSRPKRAKRKLYTNEISSPIDISGQVILMDRRVKESDHQILKRRLRTRTVK
SIO_010081: KIF20B
subclass of: SO_0000673
so part of: KIF20B
location: join(11867342..11867364,11873290..11873437,11881383..11881469,11881570..11881689,11882560..11882698,11883266..11883450,11886539..11886575,11887059..11887286,11888211..11888322,11889411..11889482,11889571..11889717,11890374..11890536,11891066..11891356,11895000..11895139,11895653..11895791,11896791..11897019,11897774..11897826,11899165..11899284,11904859..11905012,11913446..11914682,11915024..11915162,11920664..11920783,11922745..11922805,11930157..11930282,11931140..11931267,11934524..11934679,11938575..11938751,11940485..11940595,11942170..11942367,11944620..11944718,11945125..11945275,11949616..11949758,11950915..11950992)
location: region:11867342-11950992:1
so has part: feature:11867342-11867364:1:exon
so has part: feature:11873290-11873437:1:exon
so has part: feature:11881383-11881469:1:exon
so has part: feature:11881570-11881689:1:exon
so has part: feature:11882560-11882698:1:exon
so has part: feature:11883266-11883450:1:exon
so has part: feature:11886539-11886575:1:exon
so has part: feature:11887059-11887286:1:exon
so has part: feature:11888211-11888322:1:exon
so has part: feature:11889411-11889482:1:exon
so has part: feature:11889571-11889717:1:exon
so has part: feature:11890374-11890536:1:exon
so has part: feature:11891066-11891356:1:exon
so has part: feature:11895000-11895139:1:exon
so has part: feature:11895653-11895791:1:exon
so has part: feature:11896791-11897019:1:exon
so has part: feature:11897774-11897826:1:exon
so has part: feature:11899165-11899284:1:exon
so has part: feature:11904859-11905012:1:exon
so has part: feature:11913446-11914682:1:exon
so has part: feature:11915024-11915162:1:exon
so has part: feature:11920664-11920783:1:exon
so has part: feature:11922745-11922805:1:exon
so has part: feature:11930157-11930282:1:exon
so has part: feature:11931140-11931267:1:exon
so has part: feature:11934524-11934679:1:exon
so has part: feature:11938575-11938751:1:exon
so has part: feature:11940485-11940595:1:exon
so has part: feature:11942170-11942367:1:exon
so has part: feature:11944620-11944718:1:exon
so has part: feature:11945125-11945275:1:exon
so has part: feature:11949616-11949758:1:exon
so has part: feature:11950915-11950992:1:exon

XP_019808716.1
type: Protein
SIO_000068: ncbiprotein

position:11867342:1
position: 11867342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11950992:1
position: 11950992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11867342-11867364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11873290-11873437:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11881383-11881469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11881570-11881689:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11882560-11882698:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11883266-11883450:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11886539-11886575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11887059-11887286:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11888211-11888322:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11889411-11889482:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11889571-11889717:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11890374-11890536:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11891066-11891356:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11895000-11895139:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11895653-11895791:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11896791-11897019:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11897774-11897826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11899165-11899284:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11904859-11905012:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11913446-11914682:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11915024-11915162:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11920664-11920783:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11922745-11922805:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11930157-11930282:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11931140-11931267:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11934524-11934679:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11938575-11938751:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:11940485-11940595:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:11942170-11942367:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:11944620-11944718:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:11945125-11945275:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:11949616-11949758:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:11950915-11950992:1:exon

LOC109579105
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109579105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 12019241..12019662
location: region:12019241-12019662:1
so has part: feature:12019241-12019662:1:exon

109579105
type: Gene
SIO_000068: ncbigene

position:12019241:1
position: 12019241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12019662:1
position: 12019662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12019241-12019662:1:exon

LOC109579105
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109579105
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109579105
subclass of: SO_0000673
so part of: LOC109579105
location: 12019241..12019662
location: region:12019241-12019662:1
so has part: feature:12019241-12019662:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12019241-12019662:1:exon

LOC109578972
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 12308860..12309675
location: region:12308860-12309675:1
so has part: feature:12308860-12309675:1:exon

109578972
type: Gene
SIO_000068: ncbigene

position:12308860:1
position: 12308860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12309675:1
position: 12309675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12308860-12309675:1:exon

LOC109578972
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578972
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578972
subclass of: SO_0000673
so part of: LOC109578972
location: 12308860..12309675
location: region:12308860-12309675:1
so has part: feature:12308860-12309675:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12308860-12309675:1:exon

LOC109578973
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(12677414..12691077)
location: region:12677414-12691077:-1
so has part: feature:12677414-12691077:-1:exon

109578973
type: Gene
SIO_000068: ncbigene

position:12677414:-1
position: 12677414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12691077:-1
position: 12691077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12677414-12691077:-1:exon

LOC109578973
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578973
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578973
subclass of: SO_0000673
so part of: LOC109578973
location: complement(12677414..12678866)
location: region:12677414-12678866:-1
so has part: feature:12677414-12678866:-1:exon

position:12678866:-1
position: 12678866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12677414-12678866:-1:exon

LOC109578973
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578973
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109578973
subclass of: SO_0000673
so part of: LOC109578973
location: complement(12691007..12691077)
location: region:12691007-12691077:-1
so has part: feature:12691007-12691077:-1:exon

position:12691007:-1
position: 12691007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12691007-12691077:-1:exon

LOC109553218
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109553218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12702902..12704984)
location: region:12702902-12704984:-1
so has part: feature:12702902-12704984:-1:exon
subclass of: SO_0000010

109553218
type: Gene
SIO_000068: ncbigene

position:12702902:-1
position: 12702902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12704984:-1
position: 12704984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12702902-12704984:-1:exon

LOC109553218
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109553218
product: zinc finger protein 322-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019953200.1
SIO_010081: LOC109553218
subclass of: SO_0000673
so part of: LOC109553218
location: complement(12702902..12704984)
location: region:12702902-12704984:-1
so has part: feature:12702902-12704984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12702902-12704984:-1:exon

LOC109553218
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109553218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 322-like
translation: MYTSEERYNQRTQKRKIYHVCPQKGKKIFIHVHEITQIDDQIYECLECEQNFCENLALIMCERTHTGEKPYRCDMCEKTFIQSSDLISHQRIHSYEKPYKCSKCEKSFWHHLALSGHQRXHAGKKFYTCDICGKNFGQSSDLLVHQRSHTGEKPYLCSECDKCFSRSTNLIRHQXTHTGEKPFKCLECEKAFSGKSNLISHQRTHTGERPYKCNXCEKSYRHRSAFIVHKRVHTGEKPYKCGACEKCFGQKSDLIVHQRVHTGEKPYKCLECMRSFTQSANLIRHQATHTHTFKCLEYEKSFSCSSDLIVHQRIHMEEKPHQWSACDSGFLLGMDFXAQQKMRTQTEELHYKYSVCDKSFHQSSALLQHQTIHFGEKPYICNVAEKGLELSPPHVSEASQMS
SIO_010081: LOC109553218
subclass of: SO_0000673
so part of: LOC109553218
location: complement(12703511..12704719)
location: region:12703511-12704719:-1
so has part: feature:12703511-12704719:-1:exon

XP_019808759.1
type: Protein
SIO_000068: ncbiprotein

position:12703511:-1
position: 12703511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12704719:-1
position: 12704719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12703511-12704719:-1:exon

HTR7
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: HTR7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12873521..12962189)
location: region:12873521-12962189:-1
so has part: feature:12873521-12962189:-1:exon
subclass of: SO_0000010

109553243
type: Gene
SIO_000068: ncbigene

position:12873521:-1
position: 12873521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12962189:-1
position: 12962189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12873521-12962189:-1:exon

HTR7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: HTR7
product: 5-hydroxytryptamine receptor 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_019953224.1
SIO_010081: HTR7
subclass of: SO_0000673
so part of: HTR7
location: complement(join(12873521..12875707,12961400..12962189))
location: region:12873521-12962189:-1
so has part: feature:12961400-12962189:-1:exon
so has part: feature:12873521-12875707:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12961400-12962189:-1:exon

position:12961400:-1
position: 12961400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12873521-12875707:-1:exon

position:12875707:-1
position: 12875707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HTR7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: HTR7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 7
translation: MMDVNSSGRPDLYGHLRSFFLPEVGRGLPDLSPDGAGPVAGSWAPHLLHGVVEVTASPGPTRDTPRDNTSGCWEQINYGRAEKVVIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAVMPFVSVTDLIGGKWIFGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASITLPPLFGWAQNVNDGKVCLISQDFGYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKFPGFPRPEEPDSVISLNGMVKLQKEVEECANLSRLLKHERKNISIFKREQKAATTLGIIVGAFTMCWLPFFLLSTARPFICGIACSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYRNINRKLSAAGMHEALKLAERPERPELVL
SIO_010081: HTR7
subclass of: SO_0000673
so part of: HTR7
location: complement(join(12874945..12875707,12961400..12961944))
location: region:12874945-12961944:-1
so has part: feature:12961400-12961944:-1:exon
so has part: feature:12874945-12875707:-1:exon

XP_019808783.1
type: Protein
SIO_000068: ncbiprotein

position:12874945:-1
position: 12874945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12961944:-1
position: 12961944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12961400-12961944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12874945-12875707:-1:exon

RPP30
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: RPP30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12978753..13007074
location: region:12978753-13007074:1
so has part: feature:12978753-13007074:1:exon
subclass of: SO_0000010

109553106
type: Gene
SIO_000068: ncbigene

position:12978753:1
position: 12978753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13007074:1
position: 13007074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12978753-13007074:1:exon

RPP30
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RPP30
product: ribonuclease P/MRP subunit p30
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 24 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 250 samples with support for all annotated introns
transcript id: XM_019953035.1
SIO_010081: RPP30
subclass of: SO_0000673
so part of: RPP30
location: join(12978753..12978868,12980348..12980403,12980935..12980991,12982158..12982232,12985046..12985117,12990938..12991027,13000051..13000167,13000720..13000749,13001159..13001196,13001560..13001639,13006158..13007074)
location: region:12978753-13007074:1
so has part: feature:12978753-12978868:1:exon
so has part: feature:12980348-12980403:1:exon
so has part: feature:12980935-12980991:1:exon
so has part: feature:12982158-12982232:1:exon
so has part: feature:12985046-12985117:1:exon
so has part: feature:12990938-12991027:1:exon
so has part: feature:13000051-13000167:1:exon
so has part: feature:13000720-13000749:1:exon
so has part: feature:13001159-13001196:1:exon
so has part: feature:13001560-13001639:1:exon
so has part: feature:13006158-13007074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12978753-12978868:1:exon

position:12978868:1
position: 12978868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12980348-12980403:1:exon

position:12980348:1
position: 12980348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12980403:1
position: 12980403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12980935-12980991:1:exon

position:12980935:1
position: 12980935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12980991:1
position: 12980991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12982158-12982232:1:exon

position:12982158:1
position: 12982158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12982232:1
position: 12982232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12985046-12985117:1:exon

position:12985046:1
position: 12985046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12985117:1
position: 12985117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12990938-12991027:1:exon

position:12990938:1
position: 12990938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12991027:1
position: 12991027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13000051-13000167:1:exon

position:13000051:1
position: 13000051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13000167:1
position: 13000167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13000720-13000749:1:exon

position:13000720:1
position: 13000720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13000749:1
position: 13000749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13001159-13001196:1:exon

position:13001159:1
position: 13001159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13001196:1
position: 13001196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13001560-13001639:1:exon

position:13001560:1
position: 13001560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13001639:1
position: 13001639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13006158-13007074:1:exon

position:13006158:1
position: 13006158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPP30
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RPP30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease P protein subunit p30
translation: MAVFADLDLRAGSDLKALRGLVENAAHLGYSVVAINHVVEFKEKKQEIEKPVAVSELFTTLPIVQGKSKPIKILTRLTIIVSDPSHCNVLRATSSRVRLYDIVAVFPKTEKLFHVACTHLDVDLVCITVTEKLPFYFKRPPINVAIDRGVGFELLYSPAIKDSTMRRYTISNALNLMQVCKGKNVIISSAAERPLEIRGPYDVANLGLLFGLSESDAKAAVSTNCRAVLLHGETRKTAFGIISTVKKPRTSEADDDSLPACKKAKCES
SIO_010081: RPP30
subclass of: SO_0000673
so part of: RPP30
location: join(12978787..12978868,12980348..12980403,12980935..12980991,12982158..12982232,12985046..12985117,12990938..12991027,13000051..13000167,13000720..13000749,13001159..13001196,13001560..13001639,13006158..13006267)
location: region:12978787-13006267:1
so has part: feature:12978787-12978868:1:exon
so has part: feature:12980348-12980403:1:exon
so has part: feature:12980935-12980991:1:exon
so has part: feature:12982158-12982232:1:exon
so has part: feature:12985046-12985117:1:exon
so has part: feature:12990938-12991027:1:exon
so has part: feature:13000051-13000167:1:exon
so has part: feature:13000720-13000749:1:exon
so has part: feature:13001159-13001196:1:exon
so has part: feature:13001560-13001639:1:exon
so has part: feature:13006158-13006267:1:exon

XP_019808594.1
type: Protein
SIO_000068: ncbiprotein

position:12978787:1
position: 12978787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13006267:1
position: 13006267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12978787-12978868:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12980348-12980403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12980935-12980991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12982158-12982232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12985046-12985117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12990938-12991027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13000051-13000167:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13000720-13000749:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13001159-13001196:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13001560-13001639:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13006158-13006267:1:exon

ANKRD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ANKRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13018705..13028321)
location: region:13018705-13028321:-1
so has part: feature:13018705-13028321:-1:exon
subclass of: SO_0000010

109553043
type: Gene
SIO_000068: ncbigene

position:13018705:-1
position: 13018705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13028321:-1
position: 13028321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13018705-13028321:-1:exon

ANKRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ANKRD1
product: ankyrin repeat domain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 212 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 200 samples with support for all annotated introns
transcript id: XM_019952899.1
SIO_010081: ANKRD1
subclass of: SO_0000673
so part of: ANKRD1
location: complement(join(13018705..13019548,13022025..13022123,13022259..13022357,13022465..13022563,13024082..13024180,13025662..13025769,13026109..13026246,13027142..13027321,13027992..13028321))
location: region:13018705-13028321:-1
so has part: feature:13027992-13028321:-1:exon
so has part: feature:13027142-13027321:-1:exon
so has part: feature:13026109-13026246:-1:exon
so has part: feature:13025662-13025769:-1:exon
so has part: feature:13024082-13024180:-1:exon
so has part: feature:13022465-13022563:-1:exon
so has part: feature:13022259-13022357:-1:exon
so has part: feature:13022025-13022123:-1:exon
so has part: feature:13018705-13019548:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13027992-13028321:-1:exon

position:13027992:-1
position: 13027992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13027142-13027321:-1:exon

position:13027142:-1
position: 13027142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13027321:-1
position: 13027321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13026109-13026246:-1:exon

position:13026109:-1
position: 13026109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13026246:-1
position: 13026246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13025662-13025769:-1:exon

position:13025662:-1
position: 13025662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13025769:-1
position: 13025769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13024082-13024180:-1:exon

position:13024082:-1
position: 13024082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13024180:-1
position: 13024180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13022465-13022563:-1:exon

position:13022465:-1
position: 13022465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13022563:-1
position: 13022563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13022259-13022357:-1:exon

position:13022259:-1
position: 13022259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13022357:-1
position: 13022357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13022025-13022123:-1:exon

position:13022025:-1
position: 13022025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13022123:-1
position: 13022123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13018705-13019548:-1:exon

position:13019548:-1
position: 13019548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ANKRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 1
translation: MMVLKVEELVTGKKKGNGDAGEFLPEDFRDGEYEAAVTLEKQEDLKTLPVHFVSLGEQQWKTEKQREAELKKKKLEQRSKLENLEDLEIIIQLKKRKKYKKTKVPVVKEPEPEIVTEPVDVPMFLKAALENKLPVIEKFLSDKNNPDVCDEYKRTALHRACLEGHLAIVEKLIEAGAQIEFRDMLESTAIHWASRGGSLDVLKLLLNKGAKISARDKLLSTPLHVAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLITYGADLNVKNCAGKTPMDLVLHWQNGTKAIFDSLKENSYKASRIAAF
SIO_010081: ANKRD1
subclass of: SO_0000673
so part of: ANKRD1
location: complement(join(13019438..13019548,13022025..13022123,13022259..13022357,13022465..13022563,13024082..13024180,13025662..13025769,13026109..13026246,13027142..13027321,13027992..13028018))
location: region:13019438-13028018:-1
so has part: feature:13027992-13028018:-1:exon
so has part: feature:13027142-13027321:-1:exon
so has part: feature:13026109-13026246:-1:exon
so has part: feature:13025662-13025769:-1:exon
so has part: feature:13024082-13024180:-1:exon
so has part: feature:13022465-13022563:-1:exon
so has part: feature:13022259-13022357:-1:exon
so has part: feature:13022025-13022123:-1:exon
so has part: feature:13019438-13019548:-1:exon

XP_019808458.1
type: Protein
SIO_000068: ncbiprotein

position:13019438:-1
position: 13019438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13028018:-1
position: 13028018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13027992-13028018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13027142-13027321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13026109-13026246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13025662-13025769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13024082-13024180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13022465-13022563:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13022259-13022357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13022025-13022123:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13019438-13019548:-1:exon

LOC109578974
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(13291847..13292874)
location: region:13291847-13292874:-1
so has part: feature:13291847-13292874:-1:exon

109578974
type: Gene
SIO_000068: ncbigene

position:13291847:-1
position: 13291847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13292874:-1
position: 13292874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13291847-13292874:-1:exon

LOC109578974
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC109578974
subclass of: SO_0000673
so part of: LOC109578974
location: complement(13291847..13292451)
location: region:13291847-13292451:-1
so has part: feature:13291847-13292451:-1:exon

position:13292451:-1
position: 13292451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13291847-13292451:-1:exon

LOC109578974
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109578974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC109578974
subclass of: SO_0000673
so part of: LOC109578974
location: complement(13292544..13292874)
location: region:13292544-13292874:-1
so has part: feature:13292544-13292874:-1:exon

position:13292544:-1
position: 13292544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13292544-13292874:-1:exon

PCGF5
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PCGF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13369570..13428248
location: region:13369570-13428248:1
so has part: feature:13369570-13428248:1:exon
subclass of: SO_0000010

109553010
type: Gene
SIO_000068: ncbigene

position:13369570:1
position: 13369570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13428248:1
position: 13428248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13369570-13428248:1:exon

PCGF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PCGF5
product: polycomb group ring finger 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 71 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_019952810.1
SIO_010081: PCGF5
subclass of: SO_0000673
so part of: PCGF5
location: join(13369570..13369800,13371979..13372273,13391926..13392022,13399428..13399483,13399594..13399653,13402360..13402508,13407826..13407924,13410639..13410728,13417450..13417509,13422567..13428248)
location: region:13369570-13428248:1
so has part: feature:13369570-13369800:1:exon
so has part: feature:13371979-13372273:1:exon
so has part: feature:13391926-13392022:1:exon
so has part: feature:13399428-13399483:1:exon
so has part: feature:13399594-13399653:1:exon
so has part: feature:13402360-13402508:1:exon
so has part: feature:13407826-13407924:1:exon
so has part: feature:13410639-13410728:1:exon
so has part: feature:13417450-13417509:1:exon
so has part: feature:13422567-13428248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13369570-13369800:1:exon

position:13369800:1
position: 13369800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13371979-13372273:1:exon

position:13371979:1
position: 13371979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13372273:1
position: 13372273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13391926-13392022:1:exon

position:13391926:1
position: 13391926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13392022:1
position: 13392022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13399428-13399483:1:exon

position:13399428:1
position: 13399428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13399483:1
position: 13399483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13399594-13399653:1:exon

position:13399594:1
position: 13399594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13399653:1
position: 13399653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13402360-13402508:1:exon

position:13402360:1
position: 13402360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13402508:1
position: 13402508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13407826-13407924:1:exon

position:13407826:1
position: 13407826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13407924:1
position: 13407924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13410639-13410728:1:exon

position:13410639:1
position: 13410639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13410728:1
position: 13410728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13417450-13417509:1:exon

position:13417450:1
position: 13417450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13417509:1
position: 13417509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13422567-13428248:1:exon

position:13422567:1
position: 13422567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCGF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PCGF5
product: polycomb group ring finger 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 71 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_019952813.1
SIO_010081: PCGF5
subclass of: SO_0000673
so part of: PCGF5
location: join(13369570..13369800,13371979..13372273,13391926..13392022,13399428..13399483,13399594..13399653,13402360..13402508,13407826..13407924,13410639..13410728,13422567..13428248)
location: region:13369570-13428248:1
so has part: feature:13369570-13369800:1:exon
so has part: feature:13371979-13372273:1:exon
so has part: feature:13391926-13392022:1:exon
so has part: feature:13399428-13399483:1:exon
so has part: feature:13399594-13399653:1:exon
so has part: feature:13402360-13402508:1:exon
so has part: feature:13407826-13407924:1:exon
so has part: feature:13410639-13410728:1:exon
so has part: feature:13422567-13428248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13369570-13369800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13371979-13372273:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13391926-13392022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13399428-13399483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13399594-13399653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13402360-13402508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13407826-13407924:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13410639-13410728:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13422567-13428248:1:exon

PCGF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PCGF5
product: polycomb group ring finger 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 71 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_019952812.1
SIO_010081: PCGF5
subclass of: SO_0000673
so part of: PCGF5
location: join(13369570..13369800,13371979..13372273,13391926..13392022,13399428..13399483,13399597..13399653,13402360..13402508,13407826..13407924,13410639..13410728,13417450..13417509,13422567..13428248)
location: region:13369570-13428248:1
so has part: feature:13369570-13369800:1:exon
so has part: feature:13371979-13372273:1:exon
so has part: feature:13391926-13392022:1:exon
so has part: feature:13399428-13399483:1:exon
so has part: feature:13399597-13399653:1:exon
so has part: feature:13402360-13402508:1:exon
so has part: feature:13407826-13407924:1:exon
so has part: feature:13410639-13410728:1:exon
so has part: feature:13417450-13417509:1:exon
so has part: feature:13422567-13428248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13369570-13369800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13371979-13372273:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13391926-13392022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13399428-13399483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13399597-13399653:1:exon

position:13399597:1
position: 13399597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13402360-13402508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13407826-13407924:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13410639-13410728:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13417450-13417509:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13422567-13428248:1:exon

PCGF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PCGF5
product: polycomb group ring finger 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 71 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_019952811.1
SIO_010081: PCGF5
subclass of: SO_0000673
so part of: PCGF5
location: join(13369665..13369800,13371976..13372273,13391926..13392022,13399428..13399483,13399594..13399653,13402360..13402508,13407826..13407924,13410639..13410728,13417450..13417509,13422567..13428248)
location: region:13369665-13428248:1
so has part: feature:13369665-13369800:1:exon
so has part: feature:13371976-13372273:1:exon
so has part: feature:13391926-13392022:1:exon
so has part: feature:13399428-13399483:1:exon
so has part: feature:13399594-13399653:1:exon
so has part: feature:13402360-13402508:1:exon
so has part: feature:13407826-13407924:1:exon
so has part: feature:13410639-13410728:1:exon
so has part: feature:13417450-13417509:1:exon
so has part: feature:13422567-13428248:1:exon

position:13369665:1
position: 13369665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13369665-13369800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13371976-13372273:1:exon

position:13371976:1
position: 13371976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13391926-13392022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13399428-13399483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13399594-13399653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13402360-13402508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13407826-13407924:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13410639-13410728:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13417450-13417509:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13422567-13428248:1:exon

PCGF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PCGF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group RING finger protein 5 isoform X1
translation: MATQRKHLVKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQELERESEFWKKNKPQENGQDDMSKVDKPKVDEEGDENQDDKDYHRSDPQIAICLDCLRNNGQSGDNVVKGLMKKFIRCSTRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGENFRCLNCSASQVCSQDGPLYQSYPMVLQYRPRIDFG
SIO_010081: PCGF5
subclass of: SO_0000673
so part of: PCGF5
location: join(13372162..13372273,13391926..13392022,13399428..13399483,13399594..13399653,13402360..13402508,13407826..13407924,13410639..13410728,13417450..13417509,13422567..13422614)
location: region:13372162-13422614:1
so has part: feature:13372162-13372273:1:exon
so has part: feature:13391926-13392022:1:exon
so has part: feature:13399428-13399483:1:exon
so has part: feature:13399594-13399653:1:exon
so has part: feature:13402360-13402508:1:exon
so has part: feature:13407826-13407924:1:exon
so has part: feature:13410639-13410728:1:exon
so has part: feature:13417450-13417509:1:exon
so has part: feature:13422567-13422614:1:exon

XP_019808369.1
type: Protein
SIO_000068: ncbiprotein

position:13372162:1
position: 13372162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13422614:1
position: 13422614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13372162-13372273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13391926-13392022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13399428-13399483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13399594-13399653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13402360-13402508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13407826-13407924:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13410639-13410728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13417450-13417509:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13422567-13422614:1:exon

PCGF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PCGF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group RING finger protein 5 isoform X1
translation: MATQRKHLVKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQELERESEFWKKNKPQENGQDDMSKVDKPKVDEEGDENQDDKDYHRSDPQIAICLDCLRNNGQSGDNVVKGLMKKFIRCSTRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGENFRCLNCSASQVCSQDGPLYQSYPMVLQYRPRIDFG
SIO_010081: PCGF5
subclass of: SO_0000673
so part of: PCGF5
location: join(13372162..13372273,13391926..13392022,13399428..13399483,13399594..13399653,13402360..13402508,13407826..13407924,13410639..13410728,13417450..13417509,13422567..13422614)
location: region:13372162-13422614:1
so has part: feature:13372162-13372273:1:exon
so has part: feature:13391926-13392022:1:exon
so has part: feature:13399428-13399483:1:exon
so has part: feature:13399594-13399653:1:exon
so has part: feature:13402360-13402508:1:exon
so has part: feature:13407826-13407924:1:exon
so has part: feature:13410639-13410728:1:exon
so has part: feature:13417450-13417509:1:exon
so has part: feature:13422567-13422614:1:exon

XP_019808370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13372162-13372273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13391926-13392022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13399428-13399483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13399594-13399653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13402360-13402508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13407826-13407924:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13410639-13410728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13417450-13417509:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13422567-13422614:1:exon

PCGF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PCGF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group RING finger protein 5 isoform X3
translation: MATQRKHLVKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQELERESEFWKKNKPQENGQDDMSKVDKPKVDEEGDENQDDKDYHRSDPQIAICLDCLRNNGQSGDNVVKGLMKKFIRCSTRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGENSYPMVLQYRPRIDFG
SIO_010081: PCGF5
subclass of: SO_0000673
so part of: PCGF5
location: join(13372162..13372273,13391926..13392022,13399428..13399483,13399594..13399653,13402360..13402508,13407826..13407924,13410639..13410728,13422567..13422614)
location: region:13372162-13422614:1
so has part: feature:13372162-13372273:1:exon
so has part: feature:13391926-13392022:1:exon
so has part: feature:13399428-13399483:1:exon
so has part: feature:13399594-13399653:1:exon
so has part: feature:13402360-13402508:1:exon
so has part: feature:13407826-13407924:1:exon
so has part: feature:13410639-13410728:1:exon
so has part: feature:13422567-13422614:1:exon

XP_019808372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13372162-13372273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13391926-13392022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13399428-13399483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13399594-13399653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13402360-13402508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13407826-13407924:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13410639-13410728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13422567-13422614:1:exon

PCGF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PCGF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group RING finger protein 5 isoform X2
translation: MATQRKHLVKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQLERESEFWKKNKPQENGQDDMSKVDKPKVDEEGDENQDDKDYHRSDPQIAICLDCLRNNGQSGDNVVKGLMKKFIRCSTRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGENFRCLNCSASQVCSQDGPLYQSYPMVLQYRPRIDFG
SIO_010081: PCGF5
subclass of: SO_0000673
so part of: PCGF5
location: join(13372162..13372273,13391926..13392022,13399428..13399483,13399597..13399653,13402360..13402508,13407826..13407924,13410639..13410728,13417450..13417509,13422567..13422614)
location: region:13372162-13422614:1
so has part: feature:13372162-13372273:1:exon
so has part: feature:13391926-13392022:1:exon
so has part: feature:13399428-13399483:1:exon
so has part: feature:13399597-13399653:1:exon
so has part: feature:13402360-13402508:1:exon
so has part: feature:13407826-13407924:1:exon
so has part: feature:13410639-13410728:1:exon
so has part: feature:13417450-13417509:1:exon
so has part: feature:13422567-13422614:1:exon

XP_019808371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13372162-13372273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13391926-13392022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13399428-13399483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13399597-13399653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13402360-13402508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13407826-13407924:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13410639-13410728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13417450-13417509:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13422567-13422614:1:exon

HECTD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: HECTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13574050..13626670
location: region:13574050-13626670:1
so has part: feature:13574050-13626670:1:exon
subclass of: SO_0000010

109578975
type: Gene
SIO_000068: ncbigene

position:13574050:1
position: 13574050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13626670:1
position: 13626670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13574050-13626670:1:exon

HECTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: HECTD2
product: HECT domain E3 ubiquitin protein ligase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988425.1
SIO_010081: HECTD2
subclass of: SO_0000673
so part of: HECTD2
location: join(13574050..13574070,13575373..13575502,13593198..13593336,13595601..13595703,13596251..13596337,13596996..13597060,13599322..13599367,13601386..13601495,13602938..13603086,13603627..13603750,13606430..13606526,13609568..13609675,13610502..13610634,13611510..13611598,13615429..13615587,13618767..13618841,13620020..13620107,13620195..13620301,13622044..13622159,13622732..13622875,13624181..13626670)
location: region:13574050-13626670:1
so has part: feature:13574050-13574070:1:exon
so has part: feature:13575373-13575502:1:exon
so has part: feature:13593198-13593336:1:exon
so has part: feature:13595601-13595703:1:exon
so has part: feature:13596251-13596337:1:exon
so has part: feature:13596996-13597060:1:exon
so has part: feature:13599322-13599367:1:exon
so has part: feature:13601386-13601495:1:exon
so has part: feature:13602938-13603086:1:exon
so has part: feature:13603627-13603750:1:exon
so has part: feature:13606430-13606526:1:exon
so has part: feature:13609568-13609675:1:exon
so has part: feature:13610502-13610634:1:exon
so has part: feature:13611510-13611598:1:exon
so has part: feature:13615429-13615587:1:exon
so has part: feature:13618767-13618841:1:exon
so has part: feature:13620020-13620107:1:exon
so has part: feature:13620195-13620301:1:exon
so has part: feature:13622044-13622159:1:exon
so has part: feature:13622732-13622875:1:exon
so has part: feature:13624181-13626670:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13574050-13574070:1:exon

position:13574070:1
position: 13574070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13575373-13575502:1:exon

position:13575373:1
position: 13575373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13575502:1
position: 13575502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13593198-13593336:1:exon

position:13593198:1
position: 13593198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13593336:1
position: 13593336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13595601-13595703:1:exon

position:13595601:1
position: 13595601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13595703:1
position: 13595703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13596251-13596337:1:exon

position:13596251:1
position: 13596251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13596337:1
position: 13596337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13596996-13597060:1:exon

position:13596996:1
position: 13596996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13597060:1
position: 13597060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13599322-13599367:1:exon

position:13599322:1
position: 13599322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13599367:1
position: 13599367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13601386-13601495:1:exon

position:13601386:1
position: 13601386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13601495:1
position: 13601495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13602938-13603086:1:exon

position:13602938:1
position: 13602938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13603086:1
position: 13603086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13603627-13603750:1:exon

position:13603627:1
position: 13603627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13603750:1
position: 13603750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13606430-13606526:1:exon

position:13606430:1
position: 13606430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13606526:1
position: 13606526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13609568-13609675:1:exon

position:13609568:1
position: 13609568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13609675:1
position: 13609675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13610502-13610634:1:exon

position:13610502:1
position: 13610502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13610634:1
position: 13610634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13611510-13611598:1:exon

position:13611510:1
position: 13611510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13611598:1
position: 13611598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:13615429-13615587:1:exon

position:13615429:1
position: 13615429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13615587:1
position: 13615587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:13618767-13618841:1:exon

position:13618767:1
position: 13618767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13618841:1
position: 13618841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:13620020-13620107:1:exon

position:13620020:1
position: 13620020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13620107:1
position: 13620107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:13620195-13620301:1:exon

position:13620195:1
position: 13620195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13620301:1
position: 13620301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:13622044-13622159:1:exon

position:13622044:1
position: 13622044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13622159:1
position: 13622159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:13622732-13622875:1:exon

position:13622732:1
position: 13622732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13622875:1
position: 13622875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:13624181-13626670:1:exon

position:13624181:1
position: 13624181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HECTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: HECTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase HECTD2
translation: MWESKYLGLDRGFKGQISTFSSVISTVNQKKEAAENRSSPTHLVFPNIKNVRDLPPISLDVRQKQRISTDPLSSEMKAPVLPEPILPVQPKTMKDFLEDVEKAKSSGDWKTVYDFYLTTFDSFPELSAAFKKDASASNTIEDSGINAKFVNAVYDALLNTPQDIQKTVLKGIINSLLQEWKGPRTKDDLRAYFILLQNPQFNNTSTYVIYAHLLRQTASLVEADHHFLAHWFKKLPQKRFKPLVERLLQFISLRLFPAKPEEFPPISKCSWWIPSASKVLALLNTANNLVHPPLIPYTDFYNSTLDHIDLMEEYHTWQSFGNSHRFSFCQYPFVISIAAKKIIIQRDSEQQMISIARQSLVDKVSRRQRPDMNMLFLNMKVRRTHLVSDSLDELTRKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSYCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIVPSDQNTPVGICSVTTDDLCQIMPELAHGLSELLSYEGNVEEDFYSTFQVFQEEFGIIKSYNLKPGGDKIPVTNQNRKEYVQLYIDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPELDMHALQRSTQYDGYAKTDLTIRYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNWLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGFGLE
SIO_010081: HECTD2
subclass of: SO_0000673
so part of: HECTD2
location: join(13574050..13574070,13575373..13575502,13593198..13593336,13595601..13595703,13596251..13596337,13596996..13597060,13599322..13599367,13601386..13601495,13602938..13603086,13603627..13603750,13606430..13606526,13609568..13609675,13610502..13610634,13611510..13611598,13615429..13615587,13618767..13618841,13620020..13620107,13620195..13620301,13622044..13622159,13622732..13622875,13624181..13624301)
location: region:13574050-13624301:1
so has part: feature:13574050-13574070:1:exon
so has part: feature:13575373-13575502:1:exon
so has part: feature:13593198-13593336:1:exon
so has part: feature:13595601-13595703:1:exon
so has part: feature:13596251-13596337:1:exon
so has part: feature:13596996-13597060:1:exon
so has part: feature:13599322-13599367:1:exon
so has part: feature:13601386-13601495:1:exon
so has part: feature:13602938-13603086:1:exon
so has part: feature:13603627-13603750:1:exon
so has part: feature:13606430-13606526:1:exon
so has part: feature:13609568-13609675:1:exon
so has part: feature:13610502-13610634:1:exon
so has part: feature:13611510-13611598:1:exon
so has part: feature:13615429-13615587:1:exon
so has part: feature:13618767-13618841:1:exon
so has part: feature:13620020-13620107:1:exon
so has part: feature:13620195-13620301:1:exon
so has part: feature:13622044-13622159:1:exon
so has part: feature:13622732-13622875:1:exon
so has part: feature:13624181-13624301:1:exon

XP_019843984.1
type: Protein
SIO_000068: ncbiprotein

position:13624301:1
position: 13624301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13574050-13574070:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13575373-13575502:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13593198-13593336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13595601-13595703:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13596251-13596337:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13596996-13597060:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13599322-13599367:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13601386-13601495:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13602938-13603086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13603627-13603750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13606430-13606526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13609568-13609675:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13610502-13610634:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13611510-13611598:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13615429-13615587:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13618767-13618841:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13620020-13620107:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13620195-13620301:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13622044-13622159:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13622732-13622875:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13624181-13624301:1:exon

PPP1R3C
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PPP1R3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13734895..13739803)
location: region:13734895-13739803:-1
so has part: feature:13734895-13739803:-1:exon
subclass of: SO_0000010

109553067
type: Gene
SIO_000068: ncbigene

position:13734895:-1
position: 13734895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13739803:-1
position: 13739803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13734895-13739803:-1:exon

PPP1R3C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PPP1R3C
product: protein phosphatase 1 regulatory subunit 3C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 77 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 260 samples with support for all annotated introns
transcript id: XM_019952951.1
SIO_010081: PPP1R3C
subclass of: SO_0000673
so part of: PPP1R3C
location: complement(join(13734895..13737361,13739694..13739803))
location: region:13734895-13739803:-1
so has part: feature:13739694-13739803:-1:exon
so has part: feature:13734895-13737361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13739694-13739803:-1:exon

position:13739694:-1
position: 13739694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13734895-13737361:-1:exon

position:13737361:-1
position: 13737361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP1R3C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PPP1R3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 3C
translation: MSCTRMIQVLDPRPLTSSVMPVDVAVRLCLAHSPPLKSFLSPYDDFQRRNFVNKLKPLKSCLNIKQEARAQDDWKPSHNQAKKRVVFADSKGLSLTAIHVFSDLPEEPVWDLQFDLLDLNDISSGLKLHEEKNLILDFPQPSADYLSFRNHFQKNSVCLENCSLQERTVTGTVKVKNMSFEKKVQIRITFDSWQSYNDVDCAYMKNVYGGSESDTFSFAIDLPSVIPTKEKIEFCVAYHANGQVFWDNNEGQNYRIVHVQWKPDGVQTQMAAQDCAFHQAPPPKAELESTVFGSPRLASGLFPEWQSWGRMENLASYR
SIO_010081: PPP1R3C
subclass of: SO_0000673
so part of: PPP1R3C
location: complement(join(13736419..13737361,13739694..13739707))
location: region:13736419-13739707:-1
so has part: feature:13739694-13739707:-1:exon
so has part: feature:13736419-13737361:-1:exon

XP_019808510.1
type: Protein
SIO_000068: ncbiprotein

position:13736419:-1
position: 13736419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13739707:-1
position: 13739707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13739694-13739707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13736419-13737361:-1:exon

TNKS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TNKS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13885223..13950328
location: region:13885223-13950328:1
so has part: feature:13885223-13950328:1:exon
subclass of: SO_0000010

109578977
type: Gene
SIO_000068: ncbigene

position:13885223:1
position: 13885223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13950328:1
position: 13950328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13885223-13950328:1:exon

TNKS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TNKS2
product: tankyrase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988426.1
SIO_010081: TNKS2
subclass of: SO_0000673
so part of: TNKS2
location: join(13885223..13885736,13902833..13903057,13905777..13905872,13907717..13907753,13907917..13908027,13909696..13909786,13911072..13911258,13912288..13912409,13914834..13914925,13915014..13915092,13917957..13918128,13920160..13920239,13923269..13923414,13924108..13924273,13924798..13925017,13927703..13927812,13928496..13928684,13930745..13930997,13931872..13931954,13933330..13933450,13936953..13937050,13937888..13937962,13940122..13940227,13944330..13944516,13947011..13947167,13948016..13950328)
location: region:13885223-13950328:1
so has part: feature:13885223-13885736:1:exon
so has part: feature:13902833-13903057:1:exon
so has part: feature:13905777-13905872:1:exon
so has part: feature:13907717-13907753:1:exon
so has part: feature:13907917-13908027:1:exon
so has part: feature:13909696-13909786:1:exon
so has part: feature:13911072-13911258:1:exon
so has part: feature:13912288-13912409:1:exon
so has part: feature:13914834-13914925:1:exon
so has part: feature:13915014-13915092:1:exon
so has part: feature:13917957-13918128:1:exon
so has part: feature:13920160-13920239:1:exon
so has part: feature:13923269-13923414:1:exon
so has part: feature:13924108-13924273:1:exon
so has part: feature:13924798-13925017:1:exon
so has part: feature:13927703-13927812:1:exon
so has part: feature:13928496-13928684:1:exon
so has part: feature:13930745-13930997:1:exon
so has part: feature:13931872-13931954:1:exon
so has part: feature:13933330-13933450:1:exon
so has part: feature:13936953-13937050:1:exon
so has part: feature:13937888-13937962:1:exon
so has part: feature:13940122-13940227:1:exon
so has part: feature:13944330-13944516:1:exon
so has part: feature:13947011-13947167:1:exon
so has part: feature:13948016-13950328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13885223-13885736:1:exon

position:13885736:1
position: 13885736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13902833-13903057:1:exon

position:13902833:1
position: 13902833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13903057:1
position: 13903057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13905777-13905872:1:exon

position:13905777:1
position: 13905777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13905872:1
position: 13905872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13907717-13907753:1:exon

position:13907717:1
position: 13907717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13907753:1
position: 13907753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13907917-13908027:1:exon

position:13907917:1
position: 13907917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13908027:1
position: 13908027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13909696-13909786:1:exon

position:13909696:1
position: 13909696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13909786:1
position: 13909786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13911072-13911258:1:exon

position:13911072:1
position: 13911072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13911258:1
position: 13911258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13912288-13912409:1:exon

position:13912288:1
position: 13912288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13912409:1
position: 13912409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13914834-13914925:1:exon

position:13914834:1
position: 13914834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13914925:1
position: 13914925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13915014-13915092:1:exon

position:13915014:1
position: 13915014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13915092:1
position: 13915092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13917957-13918128:1:exon

position:13917957:1
position: 13917957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13918128:1
position: 13918128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13920160-13920239:1:exon

position:13920160:1
position: 13920160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13920239:1
position: 13920239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13923269-13923414:1:exon

position:13923269:1
position: 13923269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13923414:1
position: 13923414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13924108-13924273:1:exon

position:13924108:1
position: 13924108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13924273:1
position: 13924273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:13924798-13925017:1:exon

position:13924798:1
position: 13924798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13925017:1
position: 13925017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:13927703-13927812:1:exon

position:13927703:1
position: 13927703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13927812:1
position: 13927812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:13928496-13928684:1:exon

position:13928496:1
position: 13928496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13928684:1
position: 13928684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:13930745-13930997:1:exon

position:13930745:1
position: 13930745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13930997:1
position: 13930997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:13931872-13931954:1:exon

position:13931872:1
position: 13931872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13931954:1
position: 13931954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:13933330-13933450:1:exon

position:13933330:1
position: 13933330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13933450:1
position: 13933450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:13936953-13937050:1:exon

position:13936953:1
position: 13936953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13937050:1
position: 13937050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:13937888-13937962:1:exon

position:13937888:1
position: 13937888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13937962:1
position: 13937962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:13940122-13940227:1:exon

position:13940122:1
position: 13940122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13940227:1
position: 13940227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:13944330-13944516:1:exon

position:13944330:1
position: 13944330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13944516:1
position: 13944516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:13947011-13947167:1:exon

position:13947011:1
position: 13947011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13947167:1
position: 13947167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:13948016-13950328:1:exon

position:13948016:1
position: 13948016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNKS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TNKS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tankyrase-2
translation: MSGRRCAGGGAAXAGAAAEAVEPAARELFEACRNGDVERVKRLVTPEKVNSRDTAGRKSTPLHFAAGFGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFGHAEVVNLLLRHGADPNARDNWNYTPLHEAAIKGKIDVCIVLLQHGAEPTIRNTDGRTALDLADPSAKAVLTGEYKKDELLESARSGNEEKMMALLTPLNVNCHASDGRKVLPFATKFCITWVFPLSYCSDLVPLHNACSYGHYEVTELLVKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSYGADPTLLNCHNKSAIDLAPTPQLKERLAYEFKGHSLLQAAREADVTRIKKHLSLEMVNFKHPQTHETALHCAAASPYPKRKQICELLLRKGANINEKTKEFLTPLHVASEKAHNDVVEVVVKHEAKVNALDNLGQTSLHRAAHCGHLQTCRLLLSYGCDPNIISLQGFTALQMGNENVQQLLQEGIPLGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKEGDTDIQDLLRGDAALLDAAKKGCLARVKKLSSPDNVNCRDTQGRHSTPLHLAAGYNNLEVAEYLLQHGADVNAQDKGGLIPLHNAASYGHVDVAALLIKYNACVNATDKWAFTPLHEAAQKGRTQLCALLLAHGADPTLKNQEGQTPLDLVSADDVSALLTAAMPPSALPSCYKPQVLNGMRSPAATTDALSSGPSSPSSLSAASSLDNLSGSFSELSSVVSSSGTEGASSLEKKEVPGIDFSITQFVRNLGLEHLMDIFEREQITLDVLVEMGHKELKEIGINAYGHRHKLIKGVERLISGQQGLNPYLTLNTSGSGTILIDLSAEDKEFQSVEEEMQSTVREHRDGGHAGGIFNRYNILKIQKVCNKKLWERYTHRRKEVSEENHNHANERMLFHGSPFVNAIIHKGFDERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPVHKDRSCYICHRQLLFCRVTLGKSFLQFSAMKMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQAYPEYLITYQIVRPEGMVDG
SIO_010081: TNKS2
subclass of: SO_0000673
so part of: TNKS2
location: join(13885538..13885736,13902833..13903057,13905777..13905872,13907717..13907753,13907917..13908027,13909696..13909786,13911072..13911258,13912288..13912409,13914834..13914925,13915014..13915092,13917957..13918128,13920160..13920239,13923269..13923414,13924108..13924273,13924798..13925017,13927703..13927812,13928496..13928684,13930745..13930997,13931872..13931954,13933330..13933450,13936953..13937050,13937888..13937962,13940122..13940227,13944330..13944516,13947011..13947167,13948016..13948078)
location: region:13885538-13948078:1
so has part: feature:13885538-13885736:1:exon
so has part: feature:13902833-13903057:1:exon
so has part: feature:13905777-13905872:1:exon
so has part: feature:13907717-13907753:1:exon
so has part: feature:13907917-13908027:1:exon
so has part: feature:13909696-13909786:1:exon
so has part: feature:13911072-13911258:1:exon
so has part: feature:13912288-13912409:1:exon
so has part: feature:13914834-13914925:1:exon
so has part: feature:13915014-13915092:1:exon
so has part: feature:13917957-13918128:1:exon
so has part: feature:13920160-13920239:1:exon
so has part: feature:13923269-13923414:1:exon
so has part: feature:13924108-13924273:1:exon
so has part: feature:13924798-13925017:1:exon
so has part: feature:13927703-13927812:1:exon
so has part: feature:13928496-13928684:1:exon
so has part: feature:13930745-13930997:1:exon
so has part: feature:13931872-13931954:1:exon
so has part: feature:13933330-13933450:1:exon
so has part: feature:13936953-13937050:1:exon
so has part: feature:13937888-13937962:1:exon
so has part: feature:13940122-13940227:1:exon
so has part: feature:13944330-13944516:1:exon
so has part: feature:13947011-13947167:1:exon
so has part: feature:13948016-13948078:1:exon

XP_019843985.1
type: Protein
SIO_000068: ncbiprotein

position:13885538:1
position: 13885538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13948078:1
position: 13948078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13885538-13885736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13902833-13903057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13905777-13905872:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13907717-13907753:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13907917-13908027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13909696-13909786:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13911072-13911258:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13912288-13912409:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13914834-13914925:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13915014-13915092:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13917957-13918128:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13920160-13920239:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13923269-13923414:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13924108-13924273:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13924798-13925017:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:13927703-13927812:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:13928496-13928684:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:13930745-13930997:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:13931872-13931954:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:13933330-13933450:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:13936953-13937050:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:13937888-13937962:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:13940122-13940227:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:13944330-13944516:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:13947011-13947167:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:13948016-13948078:1:exon

FGFBP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: FGFBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13975483..13976749)
location: region:13975483-13976749:-1
so has part: feature:13975483-13976749:-1:exon
subclass of: SO_0000010

109579094
type: Gene
SIO_000068: ncbigene

position:13975483:-1
position: 13975483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13976749:-1
position: 13976749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13975483-13976749:-1:exon

FGFBP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FGFBP3
product: fibroblast growth factor binding protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 76% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019988595.1
SIO_010081: FGFBP3
subclass of: SO_0000673
so part of: FGFBP3
location: complement(join(13975483..13976356,13976685..13976749))
location: region:13975483-13976749:-1
so has part: feature:13976685-13976749:-1:exon
so has part: feature:13975483-13976356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13976685-13976749:-1:exon

position:13976685:-1
position: 13976685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13975483-13976356:-1:exon

position:13976356:-1
position: 13976356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FGFBP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FGFBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor-binding protein 3
translation: MSPLKRRASLSLLLLLGGCLLAAAXRKQGAAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRCVYRGEPGRCAVYAARRSHYWMQVLSGLRRKRRPCHDPAPLKARLCAGKKGRGAELRLVPQALPIVSPKAXXXXTRDPKPRARSRGQPREPALGRVTGAPPPPSAPPKGKPSEQKPKAGKRKAAWDPDEERPLGTGPDPDGLDENAKLTDTYCAEKWHSLCNFFVNFWNG
SIO_010081: FGFBP3
subclass of: SO_0000673
so part of: FGFBP3
location: complement(13975493..13976266)
location: region:13975493-13976266:-1
so has part: feature:13975493-13976266:-1:exon

XP_019844154.1
type: Protein
SIO_000068: ncbiprotein

position:13975493:-1
position: 13975493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13976266:-1
position: 13976266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13975493-13976266:-1:exon

BTAF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: BTAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13991652..14118017
location: region:13991652-14118017:1
so has part: feature:13991652-14118017:1:exon
subclass of: SO_0000010

109578978
type: Gene
SIO_000068: ncbigene

position:13991652:1
position: 13991652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14118017:1
position: 14118017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13991652-14118017:1:exon

BTAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BTAF1
product: B-TFIID TATA-box binding protein associated factor 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019988427.1
SIO_010081: BTAF1
subclass of: SO_0000673
so part of: BTAF1
location: join(13991652..13991748,14004742..14004865,14050804..14050918,14052634..14052780,14060957..14061120,14063782..14063918,14065480..14065609,14065869..14065937,14066927..14067016,14067922..14068017,14068127..14068303,14068999..14069139,14069954..14070078,14071552..14071903,14072568..14072600,14080985..14081089,14082665..14082814,14083104..14083243,14083863..14084037,14085355..14085558,14091036..14091462,14092720..14092910,14094763..14094916,14095334..14095443,14096796..14096997,14098113..14098261,14101974..14102126,14102343..14102464,14102555..14102722,14104441..14104518,14104653..14104782,14105919..14106060,14106207..14106337,14108812..14108937,14110340..14110492,14112567..14112778,14113990..14114150,14114923..14115093,14116479..14118017)
location: region:13991652-14118017:1
so has part: feature:13991652-13991748:1:exon
so has part: feature:14004742-14004865:1:exon
so has part: feature:14050804-14050918:1:exon
so has part: feature:14052634-14052780:1:exon
so has part: feature:14060957-14061120:1:exon
so has part: feature:14063782-14063918:1:exon
so has part: feature:14065480-14065609:1:exon
so has part: feature:14065869-14065937:1:exon
so has part: feature:14066927-14067016:1:exon
so has part: feature:14067922-14068017:1:exon
so has part: feature:14068127-14068303:1:exon
so has part: feature:14068999-14069139:1:exon
so has part: feature:14069954-14070078:1:exon
so has part: feature:14071552-14071903:1:exon
so has part: feature:14072568-14072600:1:exon
so has part: feature:14080985-14081089:1:exon
so has part: feature:14082665-14082814:1:exon
so has part: feature:14083104-14083243:1:exon
so has part: feature:14083863-14084037:1:exon
so has part: feature:14085355-14085558:1:exon
so has part: feature:14091036-14091462:1:exon
so has part: feature:14092720-14092910:1:exon
so has part: feature:14094763-14094916:1:exon
so has part: feature:14095334-14095443:1:exon
so has part: feature:14096796-14096997:1:exon
so has part: feature:14098113-14098261:1:exon
so has part: feature:14101974-14102126:1:exon
so has part: feature:14102343-14102464:1:exon
so has part: feature:14102555-14102722:1:exon
so has part: feature:14104441-14104518:1:exon
so has part: feature:14104653-14104782:1:exon
so has part: feature:14105919-14106060:1:exon
so has part: feature:14106207-14106337:1:exon
so has part: feature:14108812-14108937:1:exon
so has part: feature:14110340-14110492:1:exon
so has part: feature:14112567-14112778:1:exon
so has part: feature:14113990-14114150:1:exon
so has part: feature:14114923-14115093:1:exon
so has part: feature:14116479-14118017:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13991652-13991748:1:exon

position:13991748:1
position: 13991748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14004742-14004865:1:exon

position:14004742:1
position: 14004742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14004865:1
position: 14004865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14050804-14050918:1:exon

position:14050804:1
position: 14050804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14050918:1
position: 14050918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14052634-14052780:1:exon

position:14052634:1
position: 14052634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14052780:1
position: 14052780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14060957-14061120:1:exon

position:14060957:1
position: 14060957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14061120:1
position: 14061120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14063782-14063918:1:exon

position:14063782:1
position: 14063782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14063918:1
position: 14063918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14065480-14065609:1:exon

position:14065480:1
position: 14065480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14065609:1
position: 14065609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14065869-14065937:1:exon

position:14065869:1
position: 14065869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14065937:1
position: 14065937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14066927-14067016:1:exon

position:14066927:1
position: 14066927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14067016:1
position: 14067016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:14067922-14068017:1:exon

position:14067922:1
position: 14067922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14068017:1
position: 14068017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:14068127-14068303:1:exon

position:14068127:1
position: 14068127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14068303:1
position: 14068303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:14068999-14069139:1:exon

position:14068999:1
position: 14068999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14069139:1
position: 14069139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:14069954-14070078:1:exon

position:14069954:1
position: 14069954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14070078:1
position: 14070078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:14071552-14071903:1:exon

position:14071552:1
position: 14071552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14071903:1
position: 14071903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:14072568-14072600:1:exon

position:14072568:1
position: 14072568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14072600:1
position: 14072600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:14080985-14081089:1:exon

position:14080985:1
position: 14080985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14081089:1
position: 14081089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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