Bos indicus isolate QUIL7308 breed Nelore chromosome 24, Bos_indicus_1.0, whole genome shotgun sequence.
type: Entry
definition: Bos indicus isolate QUIL7308 breed Nelore chromosome 24, Bos_indicus_1.0, whole genome shotgun sequence.
sequence version: NC_032673.1
sequence date: 2017-01-12
sequence: sequence
division: CON
label: NC_032673.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA360096
dblink: SAMN02953802
keyword: WGS
keyword: RefSeq
source: Bos indicus (Bos taurus indicus)
organism: Bos indicus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos.
reference: 1
references: 22315242
reference: 2
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003044.1.\nAssembly name: Bos_indicus_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Genoa Biotecnologia SA on\n2014/11/25. The original whole-genome shotgun project has the\naccession AGFL00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Genoa Biotecnologia SA\nAssembly Method :: BWA v. 0.5.9\nAssembly Name :: Bos_indicus_1.0\nReference-guided Assembly :: GCF_000003205.2; Btau_4.0\nGenome Coverage :: 52x\nSequencing Technology :: SOLiD\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Bos indicus Annotation Release 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 65017658
topology: linear
so has quality: SO_0000987
location: 1..65017658
location: region:1-65017658:1
RO_0002162: 9915

NC_032673
type: RefSeq
SIO_000068: refseq

PRJNA360096
type: BioProject
SIO_000068: bioproject

SAMN02953802
type: BioSample
SIO_000068: biosample

1
title: Genome sequence and assembly of Bos indicus
author: Canavez, F.C.
author: Luche, D.D.
author: Stothard, P.
author: Leite, K.R.
author: Sousa-Canavez, J.M.
author: Plastow, G.
author: Meidanis, J.
author: Souza, M.A.
author: Feijao, P.
author: Moore, S.S.
author: Camara-Lopes, L.H.
journal: J. Hered.
volume: 103
issue: 3
pages: 342-348
year: 2012
pubmed: 22315242

22315242
type: PubMed
SIO_000068: pubmed

2
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65017658:1
position: 65017658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-65017658:1:source
so part of: sequence
organism: Bos indicus
mol type: genomic DNA
isolate: QUIL7308
chromosome: 24
sex: male
tissue type: peripheral blood mononuclear cells
country: Brazil
breed: Nelore
note: animal owned by Agropecuaria Quilombo Inc.

9915
type: Taxonomy
SIO_000068: taxonomy

LOC109577628
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577628
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6266..7200)
location: region:6266-7200:-1
so has part: feature:6266-7200:-1:exon
subclass of: SO_0000010

109577628
type: Gene
SIO_000068: ncbigene

position:6266:-1
position: 6266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7200:-1
position: 7200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6266-7200:-1:exon

LOC109577628
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577628
product: olfactory receptor-like protein OLF2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986400.1
SIO_010081: LOC109577628
subclass of: SO_0000673
so part of: LOC109577628
location: complement(6266..7200)
location: region:6266-7200:-1
so has part: feature:6266-7200:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6266-7200:-1:exon

LOC109577628
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577628
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(6368..6370),aa:OTHER)
product: LOW QUALITY PROTEIN: olfactory receptor-like protein OLF2
translation: MDGENCTSLKEFLLLGISXSPVIKVTLFMTFLVVYLIILVANLGMIXLVRTDPQLHTSMYFFLSHLFFSDLCYSTAXGPRMLAGFLIKNKSIPFYGCALQFLIFCTFADSECLLLAVMAYDQYMAINNPLLYTVKMSGKVCSXXXAGVYTVRVMDALINTXLTFHLCFCGSNEINHFFCDVPPLLLLXCSDTQVSELVIFIIFGFIELITLSGLFVSYCYIILAVIKIHSAEGRFKAFSTCTSYLTAXAIFQGTLLFMYFRPSASYSLDEDKMTSLFXTLVIPVLNPLIYSLRNKDVKEALMKCKNKKRCH
SIO_010081: LOC109577628
subclass of: SO_0000673
so part of: LOC109577628
location: complement(6266..7200)
location: region:6266-7200:-1
so has part: feature:6266-7200:-1:exon

XP_019841959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6266-7200:-1:exon

PARD6G
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PARD6G
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 54663..131575
location: region:54663-131575:1
so has part: feature:54663-131575:1:exon
subclass of: SO_0000010

109577957
type: Gene
SIO_000068: ncbigene

position:54663:1
position: 54663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131575:1
position: 131575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54663-131575:1:exon

PARD6G
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PARD6G
product: par-6 family cell polarity regulator gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_019986949.1
SIO_010081: PARD6G
subclass of: SO_0000673
so part of: PARD6G
location: join(54663..54857,94268..94490,128753..131575)
location: region:54663-131575:1
so has part: feature:54663-54857:1:exon
so has part: feature:94268-94490:1:exon
so has part: feature:128753-131575:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54663-54857:1:exon

position:54857:1
position: 54857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94268-94490:1:exon

position:94268:1
position: 94268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94490:1
position: 94490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128753-131575:1:exon

position:128753:1
position: 128753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PARD6G
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PARD6G
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: partitioning defective 6 homolog gamma
translation: MNRSFHKSQTLGFYDCSAVEVKSKFGAEFRRFSLDRQKPGRFEDFYKLVVHTHHIANTEVTIGYADVHGDLLPINNDDNFCKAVSSANPLLRVFIQKREEAEHCSFGAGSLSRRRRPLALREDGPRRRTHLHIGLPHDFRPVSSIIDVDIVPETHRRVRLYRHGCQKPLGFYIRDGTSVRVAPQGLEKVPGVFISRMVPGGLAESTGLLAVDDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQRNNVVRGSRASGSSGRSSDSTASRHSLPAAHVLQNLPPDEMESDEEADVVLEGVLEPRLAPRPPPGSLTRVNGAGLAPSLHSPGREGSVQRLLSSLRSDPRHSLALPPGGVEEHGPAVTL
SIO_010081: PARD6G
subclass of: SO_0000673
so part of: PARD6G
location: join(54786..54857,94268..94490,128753..129573)
location: region:54786-129573:1
so has part: feature:54786-54857:1:exon
so has part: feature:94268-94490:1:exon
so has part: feature:128753-129573:1:exon

XP_019842508.1
type: Protein
SIO_000068: ncbiprotein

position:54786:1
position: 54786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129573:1
position: 129573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54786-54857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94268-94490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128753-129573:1:exon

ADNP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ADNP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(151092..179962)
location: region:151092-179962:-1
so has part: feature:151092-179962:-1:exon
subclass of: SO_0000010

109577879
type: Gene
SIO_000068: ncbigene

position:151092:-1
position: 151092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179962:-1
position: 179962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151092-179962:-1:exon

ADNP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ADNP2
product: ADNP homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_019986820.1
SIO_010081: ADNP2
subclass of: SO_0000673
so part of: ADNP2
location: complement(join(151092..155776,160376..160465,172926..173046,179292..179962))
location: region:151092-179962:-1
so has part: feature:179292-179962:-1:exon
so has part: feature:172926-173046:-1:exon
so has part: feature:160376-160465:-1:exon
so has part: feature:151092-155776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179292-179962:-1:exon

position:179292:-1
position: 179292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:172926-173046:-1:exon

position:172926:-1
position: 172926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173046:-1
position: 173046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:160376-160465:-1:exon

position:160376:-1
position: 160376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160465:-1
position: 160465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:151092-155776:-1:exon

position:155776:-1
position: 155776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADNP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ADNP2
product: ADNP homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_019986821.1
SIO_010081: ADNP2
subclass of: SO_0000673
so part of: ADNP2
location: complement(join(151092..155776,160376..160465,172926..173046,179121..179962))
location: region:151092-179962:-1
so has part: feature:179121-179962:-1:exon
so has part: feature:172926-173046:-1:exon
so has part: feature:160376-160465:-1:exon
so has part: feature:151092-155776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179121-179962:-1:exon

position:179121:-1
position: 179121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:172926-173046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160376-160465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151092-155776:-1:exon

ADNP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ADNP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADNP homeobox protein 2 isoform X1
translation: MKISKMFQIPVENLDNIRKVRKKVKSILVDIGLDSCKELLKDLKGFDPGEKYFYNTSWGDISLWEPSGKKVRYRTKPYCCSLCKYSTKVLTSFKNHLHRYHEDEIDQELVIPCPNCVFSSQPRVVGRHFRMFHAPARKVQNYTVNILGETKSSRSDVISFTCLKCNFSNTLYYSMKKHVLVAHFHYLINSYFGLRTEEMGEHPGADDTLCAEKLPLSDRYYCKKCNANASSQDALMYHILTSDIHRDLENKLRSVISEHIKKTGLLKQMHIAPKPAAHVAIPPNSSAPGIPASSPCFHLALPQNGQSQTVVQPVQGAAPPATVGAGAVGSVTHSPPAVAQPHMTLVSSPLPVGQSSLTLPPSTPQPVFLSHGVPLNQAANPPVLPLSQPVGPVNKSVGTSILPINQTIRPGVLPLNQPVGPISRPVGPGVLSVNRPVGSGVLPVNPSVTPGVLQAVSPGVISVSRTVPSGVLPAGQVTPAGVIPSGQTATSGVLPAGQVVQSGVLPIGQTAPSGALPTGLTVPLRVLPPGQVVPPGLLPPNQTVSSAVLPVNQGINSGVLQLSQPVMSGVLPVGQPVRPGVLQLNQSVNTNILPANQTIRPGASPNTTFLTSGSILRQLIPTGKQVNGIPTYTLAPVSVTLPVPPGSVATVAPPQMPIQLLQSGPAAQMASSMAGMPSPPVVVNATQNMFVQASSSVAEANQVLKQAKQWKTCPVCNELFPSNVYQVHMEVAHKHSESKAADKLEPEKLAACAPFLKWMREKTVRCLSCKCLVSEEELIHHLLMHGLGCLFCPCTFHDIRGLSEHSRTMHLGKKKLPMDYSNKGFQLDIDANGNLLFPHLDFITILPREELGEREVYLAILAGIHSKSLVPVYIKVRPQAEGASGRPGKQVLTCPFCFGTFVTTEAYELHLKERHHITPTVHTILKSPAFKCIHCCGVYTGNMTLAAIAIHLLRCRSAPKDSSPDLQGQPGLLENSELLLVNGEVIHDPSFSVKRKLPDGHSGAEDQRDGTERPLIIDADTDPAPEKAASAAPVKRQRSEGRTEGPPVSDDALQILALNPKKYEDRSYEDKKQFLRDYFHKRPYPSKKEIELLSSLLWVWKIDVASFFGKRRYICMKAIKNHKPSVLLGFDMCELKNVKHRLNFEHEPQNL
SIO_010081: ADNP2
subclass of: SO_0000673
so part of: ADNP2
location: complement(join(152534..155776,160376..160465,172926..173046,179292..179293))
location: region:152534-179293:-1
so has part: feature:179292-179293:-1:exon
so has part: feature:172926-173046:-1:exon
so has part: feature:160376-160465:-1:exon
so has part: feature:152534-155776:-1:exon

XP_019842379.1
type: Protein
SIO_000068: ncbiprotein

position:152534:-1
position: 152534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179293:-1
position: 179293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179292-179293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172926-173046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160376-160465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152534-155776:-1:exon

ADNP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ADNP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADNP homeobox protein 2 isoform X2
translation: MFQIPVENLDNIRKVRKKVKSILVDIGLDSCKELLKDLKGFDPGEKYFYNTSWGDISLWEPSGKKVRYRTKPYCCSLCKYSTKVLTSFKNHLHRYHEDEIDQELVIPCPNCVFSSQPRVVGRHFRMFHAPARKVQNYTVNILGETKSSRSDVISFTCLKCNFSNTLYYSMKKHVLVAHFHYLINSYFGLRTEEMGEHPGADDTLCAEKLPLSDRYYCKKCNANASSQDALMYHILTSDIHRDLENKLRSVISEHIKKTGLLKQMHIAPKPAAHVAIPPNSSAPGIPASSPCFHLALPQNGQSQTVVQPVQGAAPPATVGAGAVGSVTHSPPAVAQPHMTLVSSPLPVGQSSLTLPPSTPQPVFLSHGVPLNQAANPPVLPLSQPVGPVNKSVGTSILPINQTIRPGVLPLNQPVGPISRPVGPGVLSVNRPVGSGVLPVNPSVTPGVLQAVSPGVISVSRTVPSGVLPAGQVTPAGVIPSGQTATSGVLPAGQVVQSGVLPIGQTAPSGALPTGLTVPLRVLPPGQVVPPGLLPPNQTVSSAVLPVNQGINSGVLQLSQPVMSGVLPVGQPVRPGVLQLNQSVNTNILPANQTIRPGASPNTTFLTSGSILRQLIPTGKQVNGIPTYTLAPVSVTLPVPPGSVATVAPPQMPIQLLQSGPAAQMASSMAGMPSPPVVVNATQNMFVQASSSVAEANQVLKQAKQWKTCPVCNELFPSNVYQVHMEVAHKHSESKAADKLEPEKLAACAPFLKWMREKTVRCLSCKCLVSEEELIHHLLMHGLGCLFCPCTFHDIRGLSEHSRTMHLGKKKLPMDYSNKGFQLDIDANGNLLFPHLDFITILPREELGEREVYLAILAGIHSKSLVPVYIKVRPQAEGASGRPGKQVLTCPFCFGTFVTTEAYELHLKERHHITPTVHTILKSPAFKCIHCCGVYTGNMTLAAIAIHLLRCRSAPKDSSPDLQGQPGLLENSELLLVNGEVIHDPSFSVKRKLPDGHSGAEDQRDGTERPLIIDADTDPAPEKAASAAPVKRQRSEGRTEGPPVSDDALQILALNPKKYEDRSYEDKKQFLRDYFHKRPYPSKKEIELLSSLLWVWKIDVASFFGKRRYICMKAIKNHKPSVLLGFDMCELKNVKHRLNFEHEPQNL
SIO_010081: ADNP2
subclass of: SO_0000673
so part of: ADNP2
location: complement(join(152534..155776,160376..160465,172926..173033))
location: region:152534-173033:-1
so has part: feature:172926-173033:-1:exon
so has part: feature:160376-160465:-1:exon
so has part: feature:152534-155776:-1:exon

XP_019842380.1
type: Protein
SIO_000068: ncbiprotein

position:173033:-1
position: 173033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172926-173033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160376-160465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152534-155776:-1:exon

RBFA
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: RBFA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(198802..213306)
location: region:198802-213306:-1
so has part: feature:198802-213306:-1:exon
subclass of: SO_0000010

109577901
type: Gene
SIO_000068: ncbigene

position:198802:-1
position: 198802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213306:-1
position: 213306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198802-213306:-1:exon

RBFA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RBFA
product: ribosome binding factor A (putative), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_019986865.1
SIO_010081: RBFA
subclass of: SO_0000673
so part of: RBFA
location: complement(join(198802..201498,202619..202692,205007..205091,207799..207911,208496..208564,210715..210757,213054..213306))
location: region:198802-213306:-1
so has part: feature:213054-213306:-1:exon
so has part: feature:210715-210757:-1:exon
so has part: feature:208496-208564:-1:exon
so has part: feature:207799-207911:-1:exon
so has part: feature:205007-205091:-1:exon
so has part: feature:202619-202692:-1:exon
so has part: feature:198802-201498:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213054-213306:-1:exon

position:213054:-1
position: 213054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:210715-210757:-1:exon

position:210715:-1
position: 210715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210757:-1
position: 210757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:208496-208564:-1:exon

position:208496:-1
position: 208496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208564:-1
position: 208564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207799-207911:-1:exon

position:207799:-1
position: 207799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207911:-1
position: 207911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:205007-205091:-1:exon

position:205007:-1
position: 205007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205091:-1
position: 205091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:202619-202692:-1:exon

position:202619:-1
position: 202619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202692:-1
position: 202692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:198802-201498:-1:exon

position:201498:-1
position: 201498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBFA
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: RBFA
product: ribosome binding factor A (putative), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XR_002183616.1
SIO_010081: RBFA
so part of: RBFA
location: complement(join(198802..200593,200789..201498,202619..202692,205007..205091,207799..207911,208388..208564,210715..210757,213054..213303))
location: region:198802-213303:-1
so has part: feature:213054-213303:-1:exon
so has part: feature:210715-210757:-1:exon
so has part: feature:208388-208564:-1:exon
so has part: feature:207799-207911:-1:exon
so has part: feature:205007-205091:-1:exon
so has part: feature:202619-202692:-1:exon
so has part: feature:200789-201498:-1:exon
so has part: feature:198802-200593:-1:exon

position:213303:-1
position: 213303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213054-213303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210715-210757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208388-208564:-1:exon

position:208388:-1
position: 208388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207799-207911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205007-205091:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202619-202692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:200789-201498:-1:exon

position:200789:-1
position: 200789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:198802-200593:-1:exon

position:200593:-1
position: 200593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBFA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RBFA
product: ribosome binding factor A (putative), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 48 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 246 samples with support for all annotated introns
transcript id: XM_019986863.1
SIO_010081: RBFA
subclass of: SO_0000673
so part of: RBFA
location: complement(join(198802..201498,202619..202692,205007..205091,207799..207911,208388..208564,210715..210757,213054..213303))
location: region:198802-213303:-1
so has part: feature:213054-213303:-1:exon
so has part: feature:210715-210757:-1:exon
so has part: feature:208388-208564:-1:exon
so has part: feature:207799-207911:-1:exon
so has part: feature:205007-205091:-1:exon
so has part: feature:202619-202692:-1:exon
so has part: feature:198802-201498:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213054-213303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210715-210757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208388-208564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207799-207911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205007-205091:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202619-202692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:198802-201498:-1:exon

RBFA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RBFA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ribosome-binding factor A, mitochondrial isoform X2
translation: MWAALRGRPXLHLGLLSGARGLHSSPVSCGKNLLKKFASKTKKKFWYEGPSLGSHLTHKSSQLEFLTKSTSRRTRKEDQVSLTSDFSACRVFWRATLSEAQNAHTEAVLRRSAAHMRHLLMSQQTLRNVPPIVFVQDKKYAAVMEVDRLLAIADFGPRGEKEDFVQSDFSDPEALDAAPPSDTLSPAAHLNLCGIDHEALNKQILEYKRRREQGHGSASPLWPEHVADLRKQMRRRKAKPHVDDDLSPKNYLQGGE
SIO_010081: RBFA
subclass of: SO_0000673
so part of: RBFA
location: complement(join(201237..201498,202619..202692,205007..205091,207799..207911,208496..208564,210715..210757,213054..213178))
location: region:201237-213178:-1
so has part: feature:213054-213178:-1:exon
so has part: feature:210715-210757:-1:exon
so has part: feature:208496-208564:-1:exon
so has part: feature:207799-207911:-1:exon
so has part: feature:205007-205091:-1:exon
so has part: feature:202619-202692:-1:exon
so has part: feature:201237-201498:-1:exon

XP_019842424.1
type: Protein
SIO_000068: ncbiprotein

position:201237:-1
position: 201237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213178:-1
position: 213178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213054-213178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210715-210757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208496-208564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207799-207911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205007-205091:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202619-202692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201237-201498:-1:exon

RBFA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RBFA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ribosome-binding factor A, mitochondrial isoform X1
translation: MWAALRGRPXLHLGLLSGARGLHSSPVSCGKNLLKKFASKTKKKFWYEGPSLGSHLTHKSSQLEFLTKSTSRRTRKEDQVRLRALNGLLYKALTDLLCTPEVSQELCDLNVELCKVSLTSDFSACRVFWRATLSEAQNAHTEAVLRRSAAHMRHLLMSQQTLRNVPPIVFVQDKKYAAVMEVDRLLAIADFGPRGEKEDFVQSDFSDPEALDAAPPSDTLSPAAHLNLCGIDHEALNKQILEYKRRREQGHGSASPLWPEHVADLRKQMRRRKAKPHVDDDLSPKNYLQGGE
SIO_010081: RBFA
subclass of: SO_0000673
so part of: RBFA
location: complement(join(201237..201498,202619..202692,205007..205091,207799..207911,208388..208564,210715..210757,213054..213178))
location: region:201237-213178:-1
so has part: feature:213054-213178:-1:exon
so has part: feature:210715-210757:-1:exon
so has part: feature:208388-208564:-1:exon
so has part: feature:207799-207911:-1:exon
so has part: feature:205007-205091:-1:exon
so has part: feature:202619-202692:-1:exon
so has part: feature:201237-201498:-1:exon

XP_019842422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213054-213178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210715-210757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208388-208564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207799-207911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205007-205091:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202619-202692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201237-201498:-1:exon

LOC109577961
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(215805..247354)
location: region:215805-247354:-1
so has part: feature:215805-247354:-1:exon
subclass of: SO_0000010

109577961
type: Gene
SIO_000068: ncbigene

position:215805:-1
position: 215805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247354:-1
position: 247354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215805-247354:-1:exon

LOC109577961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577961
product: probable 2-ketogluconate reductase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_019986957.1
SIO_010081: LOC109577961
subclass of: SO_0000673
so part of: LOC109577961
location: complement(join(215805..216034,220710..220806,222163..222341,223776..223947,224847..225231,247089..247354))
location: region:215805-247354:-1
so has part: feature:247089-247354:-1:exon
so has part: feature:224847-225231:-1:exon
so has part: feature:223776-223947:-1:exon
so has part: feature:222163-222341:-1:exon
so has part: feature:220710-220806:-1:exon
so has part: feature:215805-216034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247089-247354:-1:exon

position:247089:-1
position: 247089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224847-225231:-1:exon

position:224847:-1
position: 224847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225231:-1
position: 225231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:223776-223947:-1:exon

position:223776:-1
position: 223776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223947:-1
position: 223947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:222163-222341:-1:exon

position:222163:-1
position: 222163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222341:-1
position: 222341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:220710-220806:-1:exon

position:220710:-1
position: 220710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220806:-1
position: 220806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:215805-216034:-1:exon

position:216034:-1
position: 216034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109577961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577961
product: probable 2-ketogluconate reductase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_019986956.1
SIO_010081: LOC109577961
subclass of: SO_0000673
so part of: LOC109577961
location: complement(join(215805..216034,220710..220806,222163..222341,223776..223947,224847..225231,229583..229656))
location: region:215805-229656:-1
so has part: feature:229583-229656:-1:exon
so has part: feature:224847-225231:-1:exon
so has part: feature:223776-223947:-1:exon
so has part: feature:222163-222341:-1:exon
so has part: feature:220710-220806:-1:exon
so has part: feature:215805-216034:-1:exon

position:229656:-1
position: 229656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229583-229656:-1:exon

position:229583:-1
position: 229583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224847-225231:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223776-223947:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222163-222341:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:220710-220806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215805-216034:-1:exon

LOC109577961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577961
product: probable 2-ketogluconate reductase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_019986954.1
SIO_010081: LOC109577961
subclass of: SO_0000673
so part of: LOC109577961
location: complement(join(215805..216034,220710..220806,222163..222341,223776..223947,224847..225231,229337..229651))
location: region:215805-229651:-1
so has part: feature:229337-229651:-1:exon
so has part: feature:224847-225231:-1:exon
so has part: feature:223776-223947:-1:exon
so has part: feature:222163-222341:-1:exon
so has part: feature:220710-220806:-1:exon
so has part: feature:215805-216034:-1:exon

position:229651:-1
position: 229651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229337-229651:-1:exon

position:229337:-1
position: 229337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224847-225231:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223776-223947:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222163-222341:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:220710-220806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215805-216034:-1:exon

LOC109577961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577961
product: probable 2-ketogluconate reductase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_019986955.1
SIO_010081: LOC109577961
subclass of: SO_0000673
so part of: LOC109577961
location: complement(join(215805..216034,220710..220806,222163..222341,223776..223947,224847..225231,229337..229383,229583..229641))
location: region:215805-229641:-1
so has part: feature:229583-229641:-1:exon
so has part: feature:229337-229383:-1:exon
so has part: feature:224847-225231:-1:exon
so has part: feature:223776-223947:-1:exon
so has part: feature:222163-222341:-1:exon
so has part: feature:220710-220806:-1:exon
so has part: feature:215805-216034:-1:exon

position:229641:-1
position: 229641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229583-229641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229337-229383:-1:exon

position:229383:-1
position: 229383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:224847-225231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223776-223947:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222163-222341:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:220710-220806:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215805-216034:-1:exon

LOC109577961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577961
product: probable 2-ketogluconate reductase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_019986959.1
SIO_010081: LOC109577961
subclass of: SO_0000673
so part of: LOC109577961
location: complement(join(215805..216034,220710..220806,222163..222341,223776..223947,224847..225231,228727..228788))
location: region:215805-228788:-1
so has part: feature:228727-228788:-1:exon
so has part: feature:224847-225231:-1:exon
so has part: feature:223776-223947:-1:exon
so has part: feature:222163-222341:-1:exon
so has part: feature:220710-220806:-1:exon
so has part: feature:215805-216034:-1:exon

position:228788:-1
position: 228788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228727-228788:-1:exon

position:228727:-1
position: 228727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224847-225231:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223776-223947:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222163-222341:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:220710-220806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215805-216034:-1:exon

LOC109577961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109577961
translation: MGDQDLPGVLVSDLEGPHGICEDHAEDLKRHFNLITMQDFLENKAQLGPQIQAVYIWCGRPAVSQELLHSLPSLKIVASAGAGLDHLDLGLVASFGVKVANTPHAVSSPTADLGMALLLAAARRVVEGHQLAVSPHTENFPTDYMGQQVTGATLGIIGMGSIGYKIAQRARAFEMKIVYHNRKRRKLEEEEAVGAIYCERLDDLLQWSDFVMLAVSLTPQTQGLIGKRELRLMKPTAILINIGRGLLVDQEALVEALQTGLIKAAALDVTYPEPLPRDHPLLELKNVILTPHIGSATHQARRQMMENLVESILASLSGLPIPNEVLLK
SIO_010081: LOC109577961
subclass of: SO_0000673
so part of: LOC109577961
location: complement(join(215878..216034,220710..220806,222163..222341,223776..223947,224847..225228))
location: region:215878-225228:-1
so has part: feature:224847-225228:-1:exon
so has part: feature:223776-223947:-1:exon
so has part: feature:222163-222341:-1:exon
so has part: feature:220710-220806:-1:exon
so has part: feature:215878-216034:-1:exon

XP_019842513.1
type: Protein
SIO_000068: ncbiprotein

position:215878:-1
position: 215878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225228:-1
position: 225228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224847-225228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223776-223947:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222163-222341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:220710-220806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215878-216034:-1:exon

LOC109577961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109577961
translation: MGDQDLPGVLVSDLEGPHGICEDHAEDLKRHFNLITMQDFLENKAQLGPQIQAVYIWCGRPAVSQELLHSLPSLKIVASAGAGLDHLDLGLVASFGVKVANTPHAVSSPTADLGMALLLAAARRVVEGHQLAVSPHTENFPTDYMGQQVTGATLGIIGMGSIGYKIAQRARAFEMKIVYHNRKRRKLEEEEAVGAIYCERLDDLLQWSDFVMLAVSLTPQTQGLIGKRELRLMKPTAILINIGRGLLVDQEALVEALQTGLIKAAALDVTYPEPLPRDHPLLELKNVILTPHIGSATHQARRQMMENLVESILASLSGLPIPNEVLLK
SIO_010081: LOC109577961
subclass of: SO_0000673
so part of: LOC109577961
location: complement(join(215878..216034,220710..220806,222163..222341,223776..223947,224847..225228))
location: region:215878-225228:-1
so has part: feature:224847-225228:-1:exon
so has part: feature:223776-223947:-1:exon
so has part: feature:222163-222341:-1:exon
so has part: feature:220710-220806:-1:exon
so has part: feature:215878-216034:-1:exon

XP_019842514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224847-225228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223776-223947:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222163-222341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:220710-220806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215878-216034:-1:exon

LOC109577961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109577961
translation: MGDQDLPGVLVSDLEGPHGICEDHAEDLKRHFNLITMQDFLENKAQLGPQIQAVYIWCGRPAVSQELLHSLPSLKIVASAGAGLDHLDLGLVASFGVKVANTPHAVSSPTADLGMALLLAAARRVVEGHQLAVSPHTENFPTDYMGQQVTGATLGIIGMGSIGYKIAQRARAFEMKIVYHNRKRRKLEEEEAVGAIYCERLDDLLQWSDFVMLAVSLTPQTQGLIGKRELRLMKPTAILINIGRGLLVDQEALVEALQTGLIKAAALDVTYPEPLPRDHPLLELKNVILTPHIGSATHQARRQMMENLVESILASLSGLPIPNEVLLK
SIO_010081: LOC109577961
subclass of: SO_0000673
so part of: LOC109577961
location: complement(join(215878..216034,220710..220806,222163..222341,223776..223947,224847..225228))
location: region:215878-225228:-1
so has part: feature:224847-225228:-1:exon
so has part: feature:223776-223947:-1:exon
so has part: feature:222163-222341:-1:exon
so has part: feature:220710-220806:-1:exon
so has part: feature:215878-216034:-1:exon

XP_019842515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224847-225228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223776-223947:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222163-222341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:220710-220806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215878-216034:-1:exon

LOC109577961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109577961
translation: MGDQDLPGVLVSDLEGPHGICEDHAEDLKRHFNLITMQDFLENKAQLGPQIQAVYIWCGRPAVSQELLHSLPSLKIVASAGAGLDHLDLGLVASFGVKVANTPHAVSSPTADLGMALLLAAARRVVEGHQLAVSPHTENFPTDYMGQQVTGATLGIIGMGSIGYKIAQRARAFEMKIVYHNRKRRKLEEEEAVGAIYCERLDDLLQWSDFVMLAVSLTPQTQGLIGKRELRLMKPTAILINIGRGLLVDQEALVEALQTGLIKAAALDVTYPEPLPRDHPLLELKNVILTPHIGSATHQARRQMMENLVESILASLSGLPIPNEVLLK
SIO_010081: LOC109577961
subclass of: SO_0000673
so part of: LOC109577961
location: complement(join(215878..216034,220710..220806,222163..222341,223776..223947,224847..225228))
location: region:215878-225228:-1
so has part: feature:224847-225228:-1:exon
so has part: feature:223776-223947:-1:exon
so has part: feature:222163-222341:-1:exon
so has part: feature:220710-220806:-1:exon
so has part: feature:215878-216034:-1:exon

XP_019842516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224847-225228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223776-223947:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222163-222341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:220710-220806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215878-216034:-1:exon

LOC109577961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109577961
translation: MGDQDLPGVLVSDLEGPHGICEDHAEDLKRHFNLITMQDFLENKAQLGPQIQAVYIWCGRPAVSQELLHSLPSLKIVASAGAGLDHLDLGLVASFGVKVANTPHAVSSPTADLGMALLLAAARRVVEGHQLAVSPHTENFPTDYMGQQVTGATLGIIGMGSIGYKIAQRARAFEMKIVYHNRKRRKLEEEEAVGAIYCERLDDLLQWSDFVMLAVSLTPQTQGLIGKRELRLMKPTAILINIGRGLLVDQEALVEALQTGLIKAAALDVTYPEPLPRDHPLLELKNVILTPHIGSATHQARRQMMENLVESILASLSGLPIPNEVLLK
SIO_010081: LOC109577961
subclass of: SO_0000673
so part of: LOC109577961
location: complement(join(215878..216034,220710..220806,222163..222341,223776..223947,224847..225228))
location: region:215878-225228:-1
so has part: feature:224847-225228:-1:exon
so has part: feature:223776-223947:-1:exon
so has part: feature:222163-222341:-1:exon
so has part: feature:220710-220806:-1:exon
so has part: feature:215878-216034:-1:exon

XP_019842518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224847-225228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223776-223947:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222163-222341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:220710-220806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215878-216034:-1:exon

TXNL4A
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 247481..258407
location: region:247481-258407:1
so has part: feature:247481-258407:1:exon
subclass of: SO_0000010

109577919
type: Gene
SIO_000068: ncbigene

position:247481:1
position: 247481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258407:1
position: 258407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247481-258407:1:exon

TXNL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 243 samples with support for all annotated introns
transcript id: XM_019986895.1
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(247481..247560,247918..248085,250159..250228,254098..254201,257996..258407)
location: region:247481-258407:1
so has part: feature:247481-247560:1:exon
so has part: feature:247918-248085:1:exon
so has part: feature:250159-250228:1:exon
so has part: feature:254098-254201:1:exon
so has part: feature:257996-258407:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247481-247560:1:exon

position:247560:1
position: 247560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247918-248085:1:exon

position:247918:1
position: 247918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248085:1
position: 248085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:250159-250228:1:exon

position:250159:1
position: 250159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250228:1
position: 250228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:254098-254201:1:exon

position:254098:1
position: 254098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254201:1
position: 254201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:257996-258407:1:exon

position:257996:1
position: 257996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TXNL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 40 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 261 samples with support for all annotated introns
transcript id: XM_019986893.1
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(247481..247560,247918..248085,254098..254201,257996..258407)
location: region:247481-258407:1
so has part: feature:247481-247560:1:exon
so has part: feature:247918-248085:1:exon
so has part: feature:254098-254201:1:exon
so has part: feature:257996-258407:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247481-247560:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247918-248085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254098-254201:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257996-258407:1:exon

TXNL4A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XR_002183617.1
SIO_010081: TXNL4A
so part of: TXNL4A
location: join(247481..247560,247918..248085,249596..249740,250159..250228,254098..254201,257996..258208)
location: region:247481-258208:1
so has part: feature:247481-247560:1:exon
so has part: feature:247918-248085:1:exon
so has part: feature:249596-249740:1:exon
so has part: feature:250159-250228:1:exon
so has part: feature:254098-254201:1:exon
so has part: feature:257996-258208:1:exon

position:258208:1
position: 258208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247481-247560:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247918-248085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249596-249740:1:exon

position:249596:1
position: 249596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249740:1
position: 249740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:250159-250228:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:254098-254201:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:257996-258208:1:exon

TXNL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 162 samples with support for all annotated introns
transcript id: XM_019986897.1
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(247505..247560,247918..248164,254098..254201,257996..258407)
location: region:247505-258407:1
so has part: feature:247505-247560:1:exon
so has part: feature:247918-248164:1:exon
so has part: feature:254098-254201:1:exon
so has part: feature:257996-258407:1:exon

position:247505:1
position: 247505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247505-247560:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247918-248164:1:exon

position:248164:1
position: 248164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:254098-254201:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257996-258407:1:exon

TXNL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 15 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 154 samples with support for all annotated introns
transcript id: XM_019986894.1
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(247509..247610,247918..248085,254098..254201,257996..258407)
location: region:247509-258407:1
so has part: feature:247509-247610:1:exon
so has part: feature:247918-248085:1:exon
so has part: feature:254098-254201:1:exon
so has part: feature:257996-258407:1:exon

position:247509:1
position: 247509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247509-247610:1:exon

position:247610:1
position: 247610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247918-248085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254098-254201:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257996-258407:1:exon

TXNL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X1
translation: MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(247933..248085,254098..254201,257996..258167)
location: region:247933-258167:1
so has part: feature:247933-248085:1:exon
so has part: feature:254098-254201:1:exon
so has part: feature:257996-258167:1:exon

XP_019842452.1
type: Protein
SIO_000068: ncbiprotein

position:247933:1
position: 247933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258167:1
position: 258167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247933-248085:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254098-254201:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:257996-258167:1:exon

TXNL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X1
translation: MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(247933..248085,254098..254201,257996..258167)
location: region:247933-258167:1
so has part: feature:247933-248085:1:exon
so has part: feature:254098-254201:1:exon
so has part: feature:257996-258167:1:exon

XP_019842453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247933-248085:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254098-254201:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:257996-258167:1:exon

TXNL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TXNL4A
product: thioredoxin like 4A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 128 samples with support for all annotated introns
transcript id: XM_019986896.1
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(249607..249740,250159..250228,254098..254201,257996..258407)
location: region:249607-258407:1
so has part: feature:249607-249740:1:exon
so has part: feature:250159-250228:1:exon
so has part: feature:254098-254201:1:exon
so has part: feature:257996-258407:1:exon

position:249607:1
position: 249607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249607-249740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:250159-250228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254098-254201:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257996-258407:1:exon

TXNL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X2
translation: MYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(254158..254201,257996..258167)
location: region:254158-258167:1
so has part: feature:254158-254201:1:exon
so has part: feature:257996-258167:1:exon

XP_019842454.1
type: Protein
SIO_000068: ncbiprotein

position:254158:1
position: 254158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254158-254201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:257996-258167:1:exon

TXNL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X2
translation: MYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(254158..254201,257996..258167)
location: region:254158-258167:1
so has part: feature:254158-254201:1:exon
so has part: feature:257996-258167:1:exon

XP_019842455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254158-254201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:257996-258167:1:exon

TXNL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TXNL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X2
translation: MYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: TXNL4A
subclass of: SO_0000673
so part of: TXNL4A
location: join(254158..254201,257996..258167)
location: region:254158-258167:1
so has part: feature:254158-254201:1:exon
so has part: feature:257996-258167:1:exon

XP_019842456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254158-254201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:257996-258167:1:exon

HSBP1L1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: HSBP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(261034..272235)
location: region:261034-272235:-1
so has part: feature:261034-272235:-1:exon
subclass of: SO_0000010

109577953
type: Gene
SIO_000068: ncbigene

position:261034:-1
position: 261034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272235:-1
position: 272235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261034-272235:-1:exon

HSBP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: HSBP1L1
product: heat shock factor binding protein 1 like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_019986944.1
SIO_010081: HSBP1L1
subclass of: SO_0000673
so part of: HSBP1L1
location: complement(join(261034..261952,269227..269320,270299..270365,272111..272235))
location: region:261034-272235:-1
so has part: feature:272111-272235:-1:exon
so has part: feature:270299-270365:-1:exon
so has part: feature:269227-269320:-1:exon
so has part: feature:261034-261952:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272111-272235:-1:exon

position:272111:-1
position: 272111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:270299-270365:-1:exon

position:270299:-1
position: 270299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270365:-1
position: 270365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:269227-269320:-1:exon

position:269227:-1
position: 269227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269320:-1
position: 269320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:261034-261952:-1:exon

position:261952:-1
position: 261952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSBP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: HSBP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor-binding protein 1-like protein 1 isoform X1
translation: MDARSPEAPGGRALRDVAENLFQELQEHFQALTATLNLRMEEMGGRIEDLQKNVNDLMAQAGIDSPAQKHRLVASVSAALSSPWTFQ
SIO_010081: HSBP1L1
subclass of: SO_0000673
so part of: HSBP1L1
location: complement(join(261901..261952,269227..269320,270299..270365,272111..272161))
location: region:261901-272161:-1
so has part: feature:272111-272161:-1:exon
so has part: feature:270299-270365:-1:exon
so has part: feature:269227-269320:-1:exon
so has part: feature:261901-261952:-1:exon

XP_019842503.1
type: Protein
SIO_000068: ncbiprotein

position:261901:-1
position: 261901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272161:-1
position: 272161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272111-272161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270299-270365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269227-269320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:261901-261952:-1:exon

HSBP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: HSBP1L1
product: heat shock factor binding protein 1 like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_019986945.1
SIO_010081: HSBP1L1
subclass of: SO_0000673
so part of: HSBP1L1
location: complement(join(266067..266791,269227..269320,270299..270365,272111..272235))
location: region:266067-272235:-1
so has part: feature:272111-272235:-1:exon
so has part: feature:270299-270365:-1:exon
so has part: feature:269227-269320:-1:exon
so has part: feature:266067-266791:-1:exon

position:266067:-1
position: 266067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272111-272235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270299-270365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269227-269320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266067-266791:-1:exon

position:266791:-1
position: 266791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSBP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: HSBP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor-binding protein 1-like protein 1 isoform X2
translation: MDARSPEAPGGRALRDVAENLFQELQEHFQALTATLNLRMEEMGGRIEDLQKNVNDLMAQAGIDSPAQKHRLEDRTVI
SIO_010081: HSBP1L1
subclass of: SO_0000673
so part of: HSBP1L1
location: complement(join(266767..266791,269227..269320,270299..270365,272111..272161))
location: region:266767-272161:-1
so has part: feature:272111-272161:-1:exon
so has part: feature:270299-270365:-1:exon
so has part: feature:269227-269320:-1:exon
so has part: feature:266767-266791:-1:exon

XP_019842504.1
type: Protein
SIO_000068: ncbiprotein

position:266767:-1
position: 266767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272111-272161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270299-270365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269227-269320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266767-266791:-1:exon

PQLC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PQLC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 279171..293534
location: region:279171-293534:1
so has part: feature:279171-293534:1:exon
subclass of: SO_0000010

109577962
type: Gene
SIO_000068: ncbigene

position:279171:1
position: 279171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293534:1
position: 293534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279171-293534:1:exon

PQLC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PQLC1
product: PQ loop repeat containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986961.1
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(279171..279395,284038..284171,293040..293534)
location: region:279171-293534:1
so has part: feature:279171-279395:1:exon
so has part: feature:284038-284171:1:exon
so has part: feature:293040-293534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279171-279395:1:exon

position:279395:1
position: 279395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284038-284171:1:exon

position:284038:1
position: 284038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284171:1
position: 284171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293040-293534:1:exon

position:293040:1
position: 293040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PQLC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PQLC1
product: PQ loop repeat containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 239 samples with support for all annotated introns
transcript id: XM_019986960.1
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(279171..279395,284038..284171,291898..292173)
location: region:279171-292173:1
so has part: feature:279171-279395:1:exon
so has part: feature:284038-284171:1:exon
so has part: feature:291898-292173:1:exon

position:292173:1
position: 292173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279171-279395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284038-284171:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:291898-292173:1:exon

position:291898:1
position: 291898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PQLC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PQLC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PQ-loop repeat-containing protein 1 isoform X2
translation: MEAEGLGWLLVPLHQLVSWGAAGAMVFGGVVPYIPQYRDIRRTQNAEGFSTYVCLVLLVANILRILFWFGRHFESPLLWQSVVMILTMLLMLKLCTEVRVANELNLKRRVFSASRWSSCGRVATPSRRPTSC
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(279193..279395,284038..284171,293040..293101)
location: region:279193-293101:1
so has part: feature:279193-279395:1:exon
so has part: feature:284038-284171:1:exon
so has part: feature:293040-293101:1:exon

XP_019842520.1
type: Protein
SIO_000068: ncbiprotein

position:279193:1
position: 279193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293101:1
position: 293101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279193-279395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284038-284171:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293040-293101:1:exon

PQLC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PQLC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PQ-loop repeat-containing protein 1 isoform X1
translation: MEAEGLGWLLVPLHQLVSWGAAGAMVFGGVVPYIPQYRDIRRTQNAEGFSTYVCLVLLVANILRILFWFGRHFESPLLWQSVVMILTMLLMLKLCTEVRVANELNLKRRVFSAADNKDGEVRVPLGRSFLGMYHAACATPGAPGPFPALQLCPSLVSTHTCAASSPCMGITHPAWLHLQPANQHSLLFSSMK
SIO_010081: PQLC1
subclass of: SO_0000673
so part of: PQLC1
location: join(279193..279395,284038..284171,291898..292139)
location: region:279193-292139:1
so has part: feature:279193-279395:1:exon
so has part: feature:284038-284171:1:exon
so has part: feature:291898-292139:1:exon

XP_019842519.1
type: Protein
SIO_000068: ncbiprotein

position:292139:1
position: 292139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279193-279395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284038-284171:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:291898-292139:1:exon

KCNG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: KCNG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(295214..320005)
location: region:295214-320005:-1
so has part: feature:295214-320005:-1:exon
subclass of: SO_0000010

109577973
type: Gene
SIO_000068: ncbigene

position:295214:-1
position: 295214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320005:-1
position: 320005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295214-320005:-1:exon

KCNG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: KCNG2
product: potassium voltage-gated channel modifier subfamily G member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 7 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019986969.1
SIO_010081: KCNG2
subclass of: SO_0000673
so part of: KCNG2
location: complement(join(295214..295597,296067..298888,319371..320005))
location: region:295214-320005:-1
so has part: feature:319371-320005:-1:exon
so has part: feature:296067-298888:-1:exon
so has part: feature:295214-295597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319371-320005:-1:exon

position:319371:-1
position: 319371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:296067-298888:-1:exon

position:296067:-1
position: 296067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298888:-1
position: 298888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:295214-295597:-1:exon

position:295597:-1
position: 295597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: KCNG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily G member 2
translation: MALLPGPAERRGGFGVARARHVIINVGGCRVRLAWAALARCPLARLERLRTCRGHDELLRVCDDYDVSRDEFFFDRSPCAFRAIVALLRAGKLRLLRGPCALAFRDELAYWGIDEARLERCCLRRLRRREEEAAEARAGPAERGAPGSPACTPRPGGRLARGRRRLRDVVDDPRSGPAGKLFACVSVAFVAVTAVGLCLSTMPDIRAEEERGECSPKCRNLFVLETVCVAWFSFEFLLRSLQAESKCAFLRTPLNIIDILAILPFYVSLLVGLAAXXXAGGNKLLERAGLVLRLLRALRVLYVMRLARHSLGLRSLGLTVRRCAREFGLLLLFLCVAMALFAPLVHLAERELGARRDFSSVPASYWWAVISMTTVGYGDMVPRSXXXQVVALSSILSGILLMAFPVTSIFHTFSRSYSELKEQQQRAASPEPALREDSTRSASASATATEDDGSQSPDGAGXXGASAEGPWAPAGPT
SIO_010081: KCNG2
subclass of: SO_0000673
so part of: KCNG2
location: complement(join(298088..298888,319371..320003))
location: region:298088-320003:-1
so has part: feature:319371-320003:-1:exon
so has part: feature:298088-298888:-1:exon

XP_019842528.1
type: Protein
SIO_000068: ncbiprotein

position:298088:-1
position: 298088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320003:-1
position: 320003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319371-320003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298088-298888:-1:exon

CTDP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CTDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(369783..450089)
location: region:369783-450089:-1
so has part: feature:369783-450089:-1:exon
subclass of: SO_0000010

109577888
type: Gene
SIO_000068: ncbigene

position:369783:-1
position: 369783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450089:-1
position: 450089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369783-450089:-1:exon

CTDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CTDP1
product: CTD phosphatase subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_019986840.1
SIO_010081: CTDP1
subclass of: SO_0000673
so part of: CTDP1
location: complement(join(369783..370582,374919..375070,435809..436009,436588..436729,436967..437944,438710..438876,440416..440506,441385..441535,442946..443074,444266..444359,444864..444947,449636..450089))
location: region:369783-450089:-1
so has part: feature:449636-450089:-1:exon
so has part: feature:444864-444947:-1:exon
so has part: feature:444266-444359:-1:exon
so has part: feature:442946-443074:-1:exon
so has part: feature:441385-441535:-1:exon
so has part: feature:440416-440506:-1:exon
so has part: feature:438710-438876:-1:exon
so has part: feature:436967-437944:-1:exon
so has part: feature:436588-436729:-1:exon
so has part: feature:435809-436009:-1:exon
so has part: feature:374919-375070:-1:exon
so has part: feature:369783-370582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449636-450089:-1:exon

position:449636:-1
position: 449636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:444864-444947:-1:exon

position:444864:-1
position: 444864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444947:-1
position: 444947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:444266-444359:-1:exon

position:444266:-1
position: 444266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444359:-1
position: 444359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:442946-443074:-1:exon

position:442946:-1
position: 442946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443074:-1
position: 443074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:441385-441535:-1:exon

position:441385:-1
position: 441385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441535:-1
position: 441535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:440416-440506:-1:exon

position:440416:-1
position: 440416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440506:-1
position: 440506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:438710-438876:-1:exon

position:438710:-1
position: 438710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438876:-1
position: 438876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:436967-437944:-1:exon

position:436967:-1
position: 436967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437944:-1
position: 437944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:436588-436729:-1:exon

position:436588:-1
position: 436588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436729:-1
position: 436729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:435809-436009:-1:exon

position:435809:-1
position: 435809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436009:-1
position: 436009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:374919-375070:-1:exon

position:374919:-1
position: 374919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375070:-1
position: 375070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:369783-370582:-1:exon

position:370582:-1
position: 370582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CTDP1
product: CTD phosphatase subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019986841.1
SIO_010081: CTDP1
subclass of: SO_0000673
so part of: CTDP1
location: complement(join(369783..370582,374919..375070,435809..436009,436588..436729,436967..437944,438710..438876,440416..440506,441385..441535,442946..443074,444266..444359,444864..444947,447676..449128))
location: region:369783-449128:-1
so has part: feature:447676-449128:-1:exon
so has part: feature:444864-444947:-1:exon
so has part: feature:444266-444359:-1:exon
so has part: feature:442946-443074:-1:exon
so has part: feature:441385-441535:-1:exon
so has part: feature:440416-440506:-1:exon
so has part: feature:438710-438876:-1:exon
so has part: feature:436967-437944:-1:exon
so has part: feature:436588-436729:-1:exon
so has part: feature:435809-436009:-1:exon
so has part: feature:374919-375070:-1:exon
so has part: feature:369783-370582:-1:exon

position:449128:-1
position: 449128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447676-449128:-1:exon

position:447676:-1
position: 447676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:444864-444947:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444266-444359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442946-443074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441385-441535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440416-440506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438710-438876:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436967-437944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436588-436729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:435809-436009:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:374919-375070:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:369783-370582:-1:exon

CTDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CTDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
translation: MEAPPGGRLPSEGSQPPAVAEVRCPGPGPLRLLQWRVAAGAAVRIGSVLAVCEAAASTQPPGPAPVRTGSGGCVRAERRLRSERAGVVRELCAQPGQVVAPGAVLVRLEGCSHPVVMKGLCAECGQDLTQLQSENGRPQVPLSTATVSMVHSVPELMVSSEQAEKLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKVARLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYFQGIGDIHAPSAPREPPARKRGADAAEQPLSIRDPEEGRPASTVESNGLGRPARELNGGPGPRGCWPCQEEERGPRPTARTPSADGRGTXAGNLPRGKTPPEKRPVRGPAGPDADPDVPSDSGSSSESEGQPSPAPSDGESGERRTRRKPQAARDAGKAMLQGGPPGPAGERLAXANHCGEPSPGVPADAQEDGERDGLCALGGGCADRKEAETESQNSEQSGITVGESLDQSMEEEEEEDADDDDHLVHLEEILSRVHSDYYAKYDRFLSGESPEAPDIRKIVPELRSKVLADVAIIFSGLHPTNFPVERTREHYHARALGARILTQLVLDPDDPARPTHLIAARAGTEKVRQAQECGQLHVVNPDWLWSCLERWDRVEEQLFPLRDDQGRTQREDSPASFPDRQSLVPTALFHPTPVHPKAPPGPEVRIYDASTGKLIRTATSGPGPPGALPHAGLSSFRWTTSWARAATTVTVRRNRRRRRSRGVARPRPWGCQGGAGWRGAPGTTGGSGATRGS
SIO_010081: CTDP1
subclass of: SO_0000673
so part of: CTDP1
location: complement(join(370563..370582,374919..375070,435809..436009,436588..436729,436967..437944,438710..438876,440416..440506,441385..441535,442946..443074,444266..444359,444864..444947,449636..449940))
location: region:370563-449940:-1
so has part: feature:449636-449940:-1:exon
so has part: feature:444864-444947:-1:exon
so has part: feature:444266-444359:-1:exon
so has part: feature:442946-443074:-1:exon
so has part: feature:441385-441535:-1:exon
so has part: feature:440416-440506:-1:exon
so has part: feature:438710-438876:-1:exon
so has part: feature:436967-437944:-1:exon
so has part: feature:436588-436729:-1:exon
so has part: feature:435809-436009:-1:exon
so has part: feature:374919-375070:-1:exon
so has part: feature:370563-370582:-1:exon

XP_019842399.1
type: Protein
SIO_000068: ncbiprotein

position:370563:-1
position: 370563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449940:-1
position: 449940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449636-449940:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444864-444947:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444266-444359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442946-443074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441385-441535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440416-440506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438710-438876:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436967-437944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436588-436729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:435809-436009:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:374919-375070:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:370563-370582:-1:exon

CTDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CTDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II subunit A C-terminal domain phosphatase isoform X2
translation: MDKDRHRRRLCRAVLVRLEGCSHPVVMKGLCAECGQDLTQLQSENGRPQVPLSTATVSMVHSVPELMVSSEQAEKLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKVARLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYFQGIGDIHAPSAPREPPARKRGADAAEQPLSIRDPEEGRPASTVESNGLGRPARELNGGPGPRGCWPCQEEERGPRPTARTPSADGRGTXAGNLPRGKTPPEKRPVRGPAGPDADPDVPSDSGSSSESEGQPSPAPSDGESGERRTRRKPQAARDAGKAMLQGGPPGPAGERLAXANHCGEPSPGVPADAQEDGERDGLCALGGGCADRKEAETESQNSEQSGITVGESLDQSMEEEEEEDADDDDHLVHLEEILSRVHSDYYAKYDRFLSGESPEAPDIRKIVPELRSKVLADVAIIFSGLHPTNFPVERTREHYHARALGARILTQLVLDPDDPARPTHLIAARAGTEKVRQAQECGQLHVVNPDWLWSCLERWDRVEEQLFPLRDDQGRTQREDSPASFPDRQSLVPTALFHPTPVHPKAPPGPEVRIYDASTGKLIRTATSGPGPPGALPHAGLSSFRWTTSWARAATTVTVRRNRRRRRSRGVARPRPWGCQGGAGWRGAPGTTGGSGATRGS
SIO_010081: CTDP1
subclass of: SO_0000673
so part of: CTDP1
location: complement(join(370563..370582,374919..375070,435809..436009,436588..436729,436967..437944,438710..438876,440416..440506,441385..441535,442946..443074,444266..444359,444864..444947,447676..447710))
location: region:370563-447710:-1
so has part: feature:447676-447710:-1:exon
so has part: feature:444864-444947:-1:exon
so has part: feature:444266-444359:-1:exon
so has part: feature:442946-443074:-1:exon
so has part: feature:441385-441535:-1:exon
so has part: feature:440416-440506:-1:exon
so has part: feature:438710-438876:-1:exon
so has part: feature:436967-437944:-1:exon
so has part: feature:436588-436729:-1:exon
so has part: feature:435809-436009:-1:exon
so has part: feature:374919-375070:-1:exon
so has part: feature:370563-370582:-1:exon

XP_019842400.1
type: Protein
SIO_000068: ncbiprotein

position:447710:-1
position: 447710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447676-447710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444864-444947:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444266-444359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442946-443074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441385-441535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440416-440506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438710-438876:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436967-437944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436588-436729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:435809-436009:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:374919-375070:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:370563-370582:-1:exon

LOC109577629
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577629
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 451178..473273
location: region:451178-473273:1
so has part: feature:451178-473273:1:exon
subclass of: SO_0000010

109577629
type: Gene
SIO_000068: ncbigene

position:451178:1
position: 451178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473273:1
position: 473273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451178-473273:1:exon

LOC109577629
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577629
product: tigger transposable element-derived protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 3 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986401.1
SIO_010081: LOC109577629
subclass of: SO_0000673
so part of: LOC109577629
location: join(451178..453302,464729..464793,465980..466121,466844..467019,472389..472511,472575..472595,472656..472678,472948..473053,473139..473273)
location: region:451178-473273:1
so has part: feature:451178-453302:1:exon
so has part: feature:464729-464793:1:exon
so has part: feature:465980-466121:1:exon
so has part: feature:466844-467019:1:exon
so has part: feature:472389-472511:1:exon
so has part: feature:472575-472595:1:exon
so has part: feature:472656-472678:1:exon
so has part: feature:472948-473053:1:exon
so has part: feature:473139-473273:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:451178-453302:1:exon

position:453302:1
position: 453302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:464729-464793:1:exon

position:464729:1
position: 464729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464793:1
position: 464793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:465980-466121:1:exon

position:465980:1
position: 465980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466121:1
position: 466121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:466844-467019:1:exon

position:466844:1
position: 466844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467019:1
position: 467019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:472389-472511:1:exon

position:472389:1
position: 472389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472511:1
position: 472511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:472575-472595:1:exon

position:472575:1
position: 472575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472595:1
position: 472595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:472656-472678:1:exon

position:472656:1
position: 472656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472678:1
position: 472678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:472948-473053:1:exon

position:472948:1
position: 472948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473053:1
position: 473053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:473139-473273:1:exon

position:473139:1
position: 473139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109577629
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577629
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tigger transposable element-derived protein 1-like
translation: MASKCSGERKSRTSLTLNQKLEMIKLSEEGMSKAEIGRKLGLLRQTVSQVVNAKEKFLQEIKSATPVNTRMIRKRNSLIADMEKVLVVWIEDQTSHNMPLSQSLIRSKALTLFNSMKAERGAEAAEEKFEASRGWFMRFKERSRLHNVKVQGEAVGANAEATSYPDLAKMIKEGGYTTQQIFNVDETALYWKKMPSRTFIAREEKSMLGFKASKDRLTLLLGANAAGDLKLKPMLIYHSENPRALKNYAKSTLPVLYKWNHKAWMTAHLFTTWFTEYFKPTVENYCLEKKIPFKILLLIDNSPGHPRALMEMYNEIHVVFLPSNTMSILQPMDQGVISTFKSYYLRNTFRKALAAIDSDSSDGSGHSKLKTFWKGFTILDAIKNIRDSWEEVQISTLIGVWKKLIPTLIDDCEGFKTSVEEVTADVVEIARELELEVEPEDVTELLQSHDKTLTDEELLLMDEQRKWFLETEATGEEAVKIVEMTTKDLEYYISLVDKAAAGFERIDSNFERSSTVGKMLSNSIACYREIVHERKSQLMWQTSLLSYFKKLPHQLQPSATTTLISQQPSTSRQDPPPAKRLRLISSYRERRSALLVTQQDGGGGGLQEPPPAEAPVLARLGLGPAPTNRGLPSLGDTRCCGGGKRSEAFPLLSPRAVPLSGKSLQTQLHSSGGQKLAPSREQGLQSCLQLLRFYPMGCNWKVGPAWHWVTPGQAEEAAWGGRELGVEAAASRPLPGPWSLLVDSGSFSFLGSPPSADVLREFRLGPAPRLAACPQEDKGSGVLRLTEGLXWHRDLGRTGXAPASTQPTVGSLHALDVCTPYSPRVPGTQSSEMQQMDGVFLDQDLGGD
SIO_010081: LOC109577629
subclass of: SO_0000673
so part of: LOC109577629
location: join(451547..453302,464729..464793,465980..466121,466844..467019,472389..472511,472575..472595,472656..472678,472948..473053,473139..473273)
location: region:451547-473273:1
so has part: feature:451547-453302:1:exon
so has part: feature:464729-464793:1:exon
so has part: feature:465980-466121:1:exon
so has part: feature:466844-467019:1:exon
so has part: feature:472389-472511:1:exon
so has part: feature:472575-472595:1:exon
so has part: feature:472656-472678:1:exon
so has part: feature:472948-473053:1:exon
so has part: feature:473139-473273:1:exon

XP_019841960.1
type: Protein
SIO_000068: ncbiprotein

position:451547:1
position: 451547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451547-453302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464729-464793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465980-466121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466844-467019:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472389-472511:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472575-472595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:472656-472678:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472948-473053:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:473139-473273:1:exon

NFATC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: NFATC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(517574..600548)
location: region:517574-600548:-1
so has part: feature:517574-600548:-1:exon
subclass of: SO_0000010

109577750
type: Gene
SIO_000068: ncbigene

position:517574:-1
position: 517574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600548:-1
position: 600548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517574-600548:-1:exon

NFATC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: NFATC1
product: nuclear factor of activated T-cells 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 177 samples with support for all annotated introns
transcript id: XM_019986525.1
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(517574..519401,543246..543911,554529..554661,560838..560893,567116..567256,568274..568446,570360..570562,581146..581305,591027..592098,600201..600548))
location: region:517574-600548:-1
so has part: feature:600201-600548:-1:exon
so has part: feature:591027-592098:-1:exon
so has part: feature:581146-581305:-1:exon
so has part: feature:570360-570562:-1:exon
so has part: feature:568274-568446:-1:exon
so has part: feature:567116-567256:-1:exon
so has part: feature:560838-560893:-1:exon
so has part: feature:554529-554661:-1:exon
so has part: feature:543246-543911:-1:exon
so has part: feature:517574-519401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:600201-600548:-1:exon

position:600201:-1
position: 600201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591027-592098:-1:exon

position:591027:-1
position: 591027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592098:-1
position: 592098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581146-581305:-1:exon

position:581146:-1
position: 581146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581305:-1
position: 581305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:570360-570562:-1:exon

position:570360:-1
position: 570360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570562:-1
position: 570562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:568274-568446:-1:exon

position:568274:-1
position: 568274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568446:-1
position: 568446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:567116-567256:-1:exon

position:567116:-1
position: 567116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567256:-1
position: 567256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:560838-560893:-1:exon

position:560838:-1
position: 560838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560893:-1
position: 560893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:554529-554661:-1:exon

position:554529:-1
position: 554529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554661:-1
position: 554661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:543246-543911:-1:exon

position:543246:-1
position: 543246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543911:-1
position: 543911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:517574-519401:-1:exon

position:519401:-1
position: 519401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFATC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: NFATC1
product: nuclear factor of activated T-cells 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 179 samples with support for all annotated introns
transcript id: XM_019986526.1
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(517574..519401,543553..543911,554529..554661,560838..560893,567116..567256,568274..568446,570360..570562,581146..581305,591027..592098,600201..600546))
location: region:517574-600546:-1
so has part: feature:600201-600546:-1:exon
so has part: feature:591027-592098:-1:exon
so has part: feature:581146-581305:-1:exon
so has part: feature:570360-570562:-1:exon
so has part: feature:568274-568446:-1:exon
so has part: feature:567116-567256:-1:exon
so has part: feature:560838-560893:-1:exon
so has part: feature:554529-554661:-1:exon
so has part: feature:543553-543911:-1:exon
so has part: feature:517574-519401:-1:exon

position:600546:-1
position: 600546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600201-600546:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591027-592098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581146-581305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570360-570562:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:568274-568446:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567116-567256:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:560838-560893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554529-554661:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543553-543911:-1:exon

position:543553:-1
position: 543553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:517574-519401:-1:exon

NFATC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: NFATC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
translation: MTGLEEDQEFDFDFLFEFNQSDEGAVAAPAEHYGYAAPGLGAGLPLSAAHPSLPAPCHDLQSSAAGVSAVGYGGAVDSGPSGYFLSSGGIRPNGAPALESPRIEITSYLGLHHNSSQFLHEVDVEDVLPKRSPSTATLNLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESSFSYPYASPQTSPWQSPCVSPKTTDPEEGFARGLGACGLLGSPRHSPSTSPRTSVTEESWLGARTSRPSSPCNKRKYGLNGRQLSCSPHPSPTPSPQGSPRVSVTDDTWLGNTTQYTSSAIVAAINALSTDSSLDLGDGVPVKARKTTLDHSPAVALKVEPAGEDLGTTPPTPDFQPEEFAAFQHIRKGAFCDQYLSVPQHPYPWARPRSPASYTSPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPSVQLHGYVESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEAVVCSTKVLEIPLLPENNMRATIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSAASGPVLGGKRMVLSGHNFLQDSKVIFVEKAPDGHHIWEMEAKTEGDLCKPNSLVVEIPPFRNQRITSPVQVNFYVCNGKRKRSQYQHFTYLPANVPIIKTEPSDDYEPALTCGPMSQGLSPLPKPCYGQPLALPPDPGACLMPGFPPRPQGSASPELHDLSCAPYGSATAGPGHSPLGLPRPVGGVLASQEAXRPSGVPPGPPQPPPPTLLQPQVSPTSSGSCSXGRRPALCPHSPSSPLPPGTRELTRLQPCGPAHPCGTGHQQHQPPEVPSSEPAAARPPPPPEVREDSNRSLAPIPVTVKREPQELDPLDLDDVNEIIRNDLSSTNIHS
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(519352..519401,543246..543911,554529..554661,560838..560893,567116..567256,568274..568446,570360..570562,581146..581305,591027..592098,600201..600291))
location: region:519352-600291:-1
so has part: feature:600201-600291:-1:exon
so has part: feature:591027-592098:-1:exon
so has part: feature:581146-581305:-1:exon
so has part: feature:570360-570562:-1:exon
so has part: feature:568274-568446:-1:exon
so has part: feature:567116-567256:-1:exon
so has part: feature:560838-560893:-1:exon
so has part: feature:554529-554661:-1:exon
so has part: feature:543246-543911:-1:exon
so has part: feature:519352-519401:-1:exon

XP_019842084.1
type: Protein
SIO_000068: ncbiprotein

position:519352:-1
position: 519352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600291:-1
position: 600291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600201-600291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591027-592098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581146-581305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570360-570562:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:568274-568446:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567116-567256:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:560838-560893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554529-554661:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543246-543911:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:519352-519401:-1:exon

NFATC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: NFATC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 1 isoform X2
translation: MTGLEEDQEFDFDFLFEFNQSDEGAVAAPAEHYGYAAPGLGAGLPLSAAHPSLPAPCHDLQSSAAGVSAVGYGGAVDSGPSGYFLSSGGIRPNGAPALESPRIEITSYLGLHHNSSQFLHEVDVEDVLPKRSPSTATLNLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESSFSYPYASPQTSPWQSPCVSPKTTDPEEGFARGLGACGLLGSPRHSPSTSPRTSVTEESWLGARTSRPSSPCNKRKYGLNGRQLSCSPHPSPTPSPQGSPRVSVTDDTWLGNTTQYTSSAIVAAINALSTDSSLDLGDGVPVKARKTTLDHSPAVALKVEPAGEDLGTTPPTPDFQPEEFAAFQHIRKGAFCDQYLSVPQHPYPWARPRSPASYTSPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPSVQLHGYVESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEAVVCSTKVLEIPLLPENNMRATIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSAASGPVLGGKRMVLSGHNFLQDSKVIFVEKAPDGHHIWEMEAKTEGDLCKPNSLVVEIPPFRNQRITSPVQVNFYVCNGKRKRSQYQHFTYLPANVPIIKTEPSDDYEPALTCGPMSQGLSPLPKPCYGQPLALPPDPGACLMPGFPPRPQGSASPELHDLSCAPYGSATAGPGHSPLGLPRPVGGVLASQEAXRPSGVPPGPPQPPPPTLLQPQ
SIO_010081: NFATC1
subclass of: SO_0000673
so part of: NFATC1
location: complement(join(519399..519401,543553..543911,554529..554661,560838..560893,567116..567256,568274..568446,570360..570562,581146..581305,591027..592098,600201..600291))
location: region:519399-600291:-1
so has part: feature:600201-600291:-1:exon
so has part: feature:591027-592098:-1:exon
so has part: feature:581146-581305:-1:exon
so has part: feature:570360-570562:-1:exon
so has part: feature:568274-568446:-1:exon
so has part: feature:567116-567256:-1:exon
so has part: feature:560838-560893:-1:exon
so has part: feature:554529-554661:-1:exon
so has part: feature:543553-543911:-1:exon
so has part: feature:519399-519401:-1:exon

XP_019842085.1
type: Protein
SIO_000068: ncbiprotein

position:519399:-1
position: 519399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600201-600291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591027-592098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581146-581305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570360-570562:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:568274-568446:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567116-567256:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:560838-560893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554529-554661:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543553-543911:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:519399-519401:-1:exon

ATP9B
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ATP9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(612076..762378)
location: region:612076-762378:-1
so has part: feature:612076-762378:-1:exon
subclass of: SO_0000010

109577751
type: Gene
SIO_000068: ncbigene

position:612076:-1
position: 612076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762378:-1
position: 762378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612076-762378:-1:exon

ATP9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ATP9B
product: ATPase phospholipid transporting 9B (putative)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 34 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_019986527.1
SIO_010081: ATP9B
subclass of: SO_0000673
so part of: ATP9B
location: complement(join(612076..612604,614006..614209,614821..614878,615140..615248,616629..616693,616968..617123,617703..617767,617915..618059,619402..619491,621504..621602,623967..624137,624236..624319,625950..626042,626615..626776,634637..634882,638584..638696,646490..646632,656673..656833,684624..684700,690902..690977,696457..696537,706730..706824,717636..717687,722672..722730,733110..733218,734063..734176,737924..738074,748276..748449,762212..762378))
location: region:612076-762378:-1
so has part: feature:762212-762378:-1:exon
so has part: feature:748276-748449:-1:exon
so has part: feature:737924-738074:-1:exon
so has part: feature:734063-734176:-1:exon
so has part: feature:733110-733218:-1:exon
so has part: feature:722672-722730:-1:exon
so has part: feature:717636-717687:-1:exon
so has part: feature:706730-706824:-1:exon
so has part: feature:696457-696537:-1:exon
so has part: feature:690902-690977:-1:exon
so has part: feature:684624-684700:-1:exon
so has part: feature:656673-656833:-1:exon
so has part: feature:646490-646632:-1:exon
so has part: feature:638584-638696:-1:exon
so has part: feature:634637-634882:-1:exon
so has part: feature:626615-626776:-1:exon
so has part: feature:625950-626042:-1:exon
so has part: feature:624236-624319:-1:exon
so has part: feature:623967-624137:-1:exon
so has part: feature:621504-621602:-1:exon
so has part: feature:619402-619491:-1:exon
so has part: feature:617915-618059:-1:exon
so has part: feature:617703-617767:-1:exon
so has part: feature:616968-617123:-1:exon
so has part: feature:616629-616693:-1:exon
so has part: feature:615140-615248:-1:exon
so has part: feature:614821-614878:-1:exon
so has part: feature:614006-614209:-1:exon
so has part: feature:612076-612604:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762212-762378:-1:exon

position:762212:-1
position: 762212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:748276-748449:-1:exon

position:748276:-1
position: 748276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748449:-1
position: 748449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:737924-738074:-1:exon

position:737924:-1
position: 737924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738074:-1
position: 738074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:734063-734176:-1:exon

position:734063:-1
position: 734063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734176:-1
position: 734176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:733110-733218:-1:exon

position:733110:-1
position: 733110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733218:-1
position: 733218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:722672-722730:-1:exon

position:722672:-1
position: 722672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722730:-1
position: 722730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:717636-717687:-1:exon

position:717636:-1
position: 717636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717687:-1
position: 717687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:706730-706824:-1:exon

position:706730:-1
position: 706730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706824:-1
position: 706824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:696457-696537:-1:exon

position:696457:-1
position: 696457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696537:-1
position: 696537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:690902-690977:-1:exon

position:690902:-1
position: 690902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690977:-1
position: 690977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:684624-684700:-1:exon

position:684624:-1
position: 684624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684700:-1
position: 684700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:656673-656833:-1:exon

position:656673:-1
position: 656673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656833:-1
position: 656833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:646490-646632:-1:exon

position:646490:-1
position: 646490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646632:-1
position: 646632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:638584-638696:-1:exon

position:638584:-1
position: 638584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638696:-1
position: 638696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:634637-634882:-1:exon

position:634637:-1
position: 634637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634882:-1
position: 634882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:626615-626776:-1:exon

position:626615:-1
position: 626615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626776:-1
position: 626776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:625950-626042:-1:exon

position:625950:-1
position: 625950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626042:-1
position: 626042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:624236-624319:-1:exon

position:624236:-1
position: 624236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624319:-1
position: 624319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:623967-624137:-1:exon

position:623967:-1
position: 623967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624137:-1
position: 624137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:621504-621602:-1:exon

position:621504:-1
position: 621504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621602:-1
position: 621602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:619402-619491:-1:exon

position:619402:-1
position: 619402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619491:-1
position: 619491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:617915-618059:-1:exon

position:617915:-1
position: 617915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618059:-1
position: 618059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:617703-617767:-1:exon

position:617703:-1
position: 617703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617767:-1
position: 617767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:616968-617123:-1:exon

position:616968:-1
position: 616968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617123:-1
position: 617123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:616629-616693:-1:exon

position:616629:-1
position: 616629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616693:-1
position: 616693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:615140-615248:-1:exon

position:615140:-1
position: 615140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615248:-1
position: 615248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:614821-614878:-1:exon

position:614821:-1
position: 614821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614878:-1
position: 614878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:614006-614209:-1:exon

position:614006:-1
position: 614006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614209:-1
position: 614209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:612076-612604:-1:exon

position:612604:-1
position: 612604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ATP9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable phospholipid-transporting ATPase IIB
translation: MADQIPLYPVRSAAAVAAANRKRAAYFSSAGPGPGADRPSRYQLEDESAHLDEMPLMMSEEGFENDESDYHTLPRARITRRKRGLEWFVCGGWKFLCTSCCDWLINICQRKRELKARTVWLGCPEKCEEKHPRNSIKNQKYNIFTFIPGVLYEQFKFFLNLYFLIVSCSQFVPALKIGYLYTYWAPLGFVLAVTIMREAVDEFRRFQRDKEVNSQLYSKLTVRGKVQVKSSDIQVGDLIIVEKNQRIPSDMVFLRTSEKAGSCFIRTDQLDGETDWKLKVAVSCTQRLPALGDLFSINAYVYAQKPQLDIHSFEGTFTREDSDPPVHESLSIENTLWASTVVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNQLTKALFLALVALSVVMVTLQGFAGPWYRSLFRFLLLFSYIIPISLRVNLDMGKAAYGWMIMRDEHIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMVFKRLHLGTVSYGTDTMDEIQNHLVNAYTQTQCQAGGSSAASTPPRKAPSSAPKVRRSVSSRVHEAVKAVALCHNVTPVYEARGAAGETEVAEADQDFSDDNRTYQASSPDEVALVQWTESVGLTLVSRDLTSMQLRTPGGQILTYCILQTFPFTSESKRMGVIVRDESTAEITFYMKGADVAMASIVQYNDWLEEECGNMAREGLRTLVVAKRALTEEQYQDFESRYNQAKLSLHDRTLKVAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKLETATCIAKSSHLVSRTQDTHVFRPVTSRGEAHLELNAFRRKHDCALVISGDSLEVCLKYYEHEFVELACQCPAVVCCRCSPTQKAHIXKLLQQHTGRRTCAIGDGGNDVSMIQAADCGIGIEGKEGRQASLAADFSITRFKHVGRLLMVHGRSSYKRSAALGQFVMHRGLIISTMQAVFSSVFYFASVPLYQGFLMVGYATVYTMFPVFSLVLDQDVKPEMAMLYPELYKDLTKGRSLSFKTFLVWVLISIYQGGILMFGALVLFESEFVHVVAISFTALVLTELLMVALTVRTWHWLMVVAQLLSLGCYVASLAFLNEYFDVAFITTVTFVWKVSAITVVSCLPLYVLKYLKRKLSPPSYSKLSS
SIO_010081: ATP9B
subclass of: SO_0000673
so part of: ATP9B
location: complement(join(612468..612604,614006..614209,614821..614878,615140..615248,616629..616693,616968..617123,617703..617767,617915..618059,619402..619491,621504..621602,623967..624137,624236..624319,625950..626042,626615..626776,634637..634882,638584..638696,646490..646632,656673..656833,684624..684700,690902..690977,696457..696537,706730..706824,717636..717687,722672..722730,733110..733218,734063..734176,737924..738074,748276..748449,762212..762333))
location: region:612468-762333:-1
so has part: feature:762212-762333:-1:exon
so has part: feature:748276-748449:-1:exon
so has part: feature:737924-738074:-1:exon
so has part: feature:734063-734176:-1:exon
so has part: feature:733110-733218:-1:exon
so has part: feature:722672-722730:-1:exon
so has part: feature:717636-717687:-1:exon
so has part: feature:706730-706824:-1:exon
so has part: feature:696457-696537:-1:exon
so has part: feature:690902-690977:-1:exon
so has part: feature:684624-684700:-1:exon
so has part: feature:656673-656833:-1:exon
so has part: feature:646490-646632:-1:exon
so has part: feature:638584-638696:-1:exon
so has part: feature:634637-634882:-1:exon
so has part: feature:626615-626776:-1:exon
so has part: feature:625950-626042:-1:exon
so has part: feature:624236-624319:-1:exon
so has part: feature:623967-624137:-1:exon
so has part: feature:621504-621602:-1:exon
so has part: feature:619402-619491:-1:exon
so has part: feature:617915-618059:-1:exon
so has part: feature:617703-617767:-1:exon
so has part: feature:616968-617123:-1:exon
so has part: feature:616629-616693:-1:exon
so has part: feature:615140-615248:-1:exon
so has part: feature:614821-614878:-1:exon
so has part: feature:614006-614209:-1:exon
so has part: feature:612468-612604:-1:exon

XP_019842086.1
type: Protein
SIO_000068: ncbiprotein

position:612468:-1
position: 612468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762333:-1
position: 762333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762212-762333:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:748276-748449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:737924-738074:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:734063-734176:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:733110-733218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722672-722730:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:717636-717687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:706730-706824:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:696457-696537:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:690902-690977:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684624-684700:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:656673-656833:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:646490-646632:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:638584-638696:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:634637-634882:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:626615-626776:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:625950-626042:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:624236-624319:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:623967-624137:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:621504-621602:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:619402-619491:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:617915-618059:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:617703-617767:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:616968-617123:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:616629-616693:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:615140-615248:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:614821-614878:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:614006-614209:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:612468-612604:-1:exon

LOC109577752
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 653040..673014
location: region:653040-673014:1
so has part: feature:653040-673014:1:exon
subclass of: SO_0000010

109577752
type: Gene
SIO_000068: ncbigene

position:653040:1
position: 653040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673014:1
position: 673014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653040-673014:1:exon

LOC109577752
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: LOC109577752
product: collagen alpha-1(III) chain-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_002183577.1
SIO_010081: LOC109577752
so part of: LOC109577752
location: join(653040..654679,655311..655347)
location: region:653040-655347:1
so has part: feature:653040-654679:1:exon
so has part: feature:655311-655347:1:exon

position:655347:1
position: 655347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653040-654679:1:exon

position:654679:1
position: 654679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:655311-655347:1:exon

position:655311:1
position: 655311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109577752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577752
product: collagen alpha-1(III) chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019986528.1
SIO_010081: LOC109577752
subclass of: SO_0000673
so part of: LOC109577752
location: join(653219..654679,668942..671556,672065..673014)
location: region:653219-673014:1
so has part: feature:653219-654679:1:exon
so has part: feature:668942-671556:1:exon
so has part: feature:672065-673014:1:exon

position:653219:1
position: 653219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653219-654679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668942-671556:1:exon

position:668942:1
position: 668942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671556:1
position: 671556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:672065-673014:1:exon

position:672065:1
position: 672065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109577752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577752
product: collagen alpha-1(III) chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986530.1
SIO_010081: LOC109577752
subclass of: SO_0000673
so part of: LOC109577752
location: join(655378..655481,668942..669054,671254..671556,672065..673014)
location: region:655378-673014:1
so has part: feature:655378-655481:1:exon
so has part: feature:668942-669054:1:exon
so has part: feature:671254-671556:1:exon
so has part: feature:672065-673014:1:exon

position:655378:1
position: 655378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655378-655481:1:exon

position:655481:1
position: 655481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:668942-669054:1:exon

position:669054:1
position: 669054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:671254-671556:1:exon

position:671254:1
position: 671254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:672065-673014:1:exon

LOC109577752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577752
product: collagen alpha-1(III) chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019986529.1
SIO_010081: LOC109577752
subclass of: SO_0000673
so part of: LOC109577752
location: join(655378..655481,668945..671556,672065..673014)
location: region:655378-673014:1
so has part: feature:655378-655481:1:exon
so has part: feature:668945-671556:1:exon
so has part: feature:672065-673014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:655378-655481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668945-671556:1:exon

position:668945:1
position: 668945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:672065-673014:1:exon

LOC109577752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109577752 isoform X2
translation: MLIYLCIAVVKLPQLASATVLWEKEESLNKVITHRGHGSRESTSLGPEGRPLRVTLEEVTVSSGRALRLGWTRRPRRGLGLAGRARHRGSALQTGALGTWGLPAAAPRLLCMASKGPDSKAQPGTQAPASPPEQGSPAGQSHGKSKATEASMFNSLKWVPQT
SIO_010081: LOC109577752
subclass of: SO_0000673
so part of: LOC109577752
location: join(655460..655481,668942..669054,671254..671556,672065..672115)
location: region:655460-672115:1
so has part: feature:655460-655481:1:exon
so has part: feature:668942-669054:1:exon
so has part: feature:671254-671556:1:exon
so has part: feature:672065-672115:1:exon

XP_019842089.1
type: Protein
SIO_000068: ncbiprotein

position:655460:1
position: 655460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672115:1
position: 672115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655460-655481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668942-669054:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671254-671556:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672065-672115:1:exon

LOC109577752
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: LOC109577752
product: collagen alpha-1(III) chain-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_002183575.1
SIO_010081: LOC109577752
so part of: LOC109577752
location: join(659282..671556,671800..671925,672065..673014)
location: region:659282-673014:1
so has part: feature:659282-671556:1:exon
so has part: feature:671800-671925:1:exon
so has part: feature:672065-673014:1:exon

position:659282:1
position: 659282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659282-671556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671800-671925:1:exon

position:671800:1
position: 671800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671925:1
position: 671925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:672065-673014:1:exon

LOC109577752
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: LOC109577752
product: collagen alpha-1(III) chain-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002183576.1
SIO_010081: LOC109577752
so part of: LOC109577752
location: join(659282..659512,659785..671556,671800..671925,672065..673014)
location: region:659282-673014:1
so has part: feature:659282-659512:1:exon
so has part: feature:659785-671556:1:exon
so has part: feature:671800-671925:1:exon
so has part: feature:672065-673014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:659282-659512:1:exon

position:659512:1
position: 659512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:659785-671556:1:exon

position:659785:1
position: 659785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:671800-671925:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672065-673014:1:exon

LOC109577752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577752
product: collagen alpha-1(III) chain-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019986531.1
SIO_010081: LOC109577752
subclass of: SO_0000673
so part of: LOC109577752
location: join(670712..671556,672065..673014)
location: region:670712-673014:1
so has part: feature:670712-671556:1:exon
so has part: feature:672065-673014:1:exon

position:670712:1
position: 670712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670712-671556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:672065-673014:1:exon

LOC109577752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109577752 isoform X3
translation: MRGWGRTPSQKNGGQAVPSTTVPVAQDLLLSLPCLPEEGGAPSGTLGETHTAAPGWSSHTRPSSTSSTGRVAFPQLAVRGSCSTHAGRPGLHWVCHWVWGMGSNSLSTWSFLLQGPEGRPLRVTLEEVTVSSGRALRLGWTRRPRRGLGLAGRARHRGSALQTGALGTWGLPAAAPRLLCMASKGPDSKAQPGTQAPASPPEQGSPAGQSHGKSKATEASMFNSLKWVPQT
SIO_010081: LOC109577752
subclass of: SO_0000673
so part of: LOC109577752
location: join(670912..671556,672065..672115)
location: region:670912-672115:1
so has part: feature:670912-671556:1:exon
so has part: feature:672065-672115:1:exon

XP_019842090.1
type: Protein
SIO_000068: ncbiprotein

position:670912:1
position: 670912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670912-671556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:672065-672115:1:exon

LOC109577752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(III) chain-like isoform X1
translation: MGQDALPEERGTGSPVHDCACRSGPAPQSAVPPRGGRSPFRDLGRDSHCSPRVVEPHSPLQHFVYRPCGFPTAGGSGLLQHPRREAGTALGVSLGLGDGQQFSVHLVFPAAGPGGTASEGDTGRGDGFQRPGPAAWLDAEAAQRPGAGGAGPAQGQRSADRSLGHMGPACCCPSPPLHGLQGPGQQSAAGDSGPCFSTGTGQPCWTVTRKVEGYRGLDVQQSEVGPTDLTGFPPHLLCQPCLELSEQLASVSLLGPRPWLQTWLQHQRHGRPSGDQPSTASSAPSSCHFPQNA
SIO_010081: LOC109577752
subclass of: SO_0000673
so part of: LOC109577752
location: join(670920..671556,672065..672309)
location: region:670920-672309:1
so has part: feature:670920-671556:1:exon
so has part: feature:672065-672309:1:exon

XP_019842087.1
type: Protein
SIO_000068: ncbiprotein

position:670920:1
position: 670920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672309:1
position: 672309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670920-671556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:672065-672309:1:exon

LOC109577752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(III) chain-like isoform X1
translation: MGQDALPEERGTGSPVHDCACRSGPAPQSAVPPRGGRSPFRDLGRDSHCSPRVVEPHSPLQHFVYRPCGFPTAGGSGLLQHPRREAGTALGVSLGLGDGQQFSVHLVFPAAGPGGTASEGDTGRGDGFQRPGPAAWLDAEAAQRPGAGGAGPAQGQRSADRSLGHMGPACCCPSPPLHGLQGPGQQSAAGDSGPCFSTGTGQPCWTVTRKVEGYRGLDVQQSEVGPTDLTGFPPHLLCQPCLELSEQLASVSLLGPRPWLQTWLQHQRHGRPSGDQPSTASSAPSSCHFPQNA
SIO_010081: LOC109577752
subclass of: SO_0000673
so part of: LOC109577752
location: join(670920..671556,672065..672309)
location: region:670920-672309:1
so has part: feature:670920-671556:1:exon
so has part: feature:672065-672309:1:exon

XP_019842088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:670920-671556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:672065-672309:1:exon

SALL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: SALL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(795202..801597)
location: region:795202-801597:-1
so has part: feature:795202-801597:-1:exon
subclass of: SO_0000010

109577630
type: Gene
SIO_000068: ncbigene

position:795202:-1
position: 795202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801597:-1
position: 801597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795202-801597:-1:exon

SALL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SALL3
product: spalt like transcription factor 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986402.1
SIO_010081: SALL3
subclass of: SO_0000673
so part of: SALL3
location: complement(join(795202..795633,796696..800156,801513..801597))
location: region:795202-801597:-1
so has part: feature:801513-801597:-1:exon
so has part: feature:796696-800156:-1:exon
so has part: feature:795202-795633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:801513-801597:-1:exon

position:801513:-1
position: 801513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:796696-800156:-1:exon

position:796696:-1
position: 796696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800156:-1
position: 800156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:795202-795633:-1:exon

position:795633:-1
position: 795633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SALL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SALL3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sal-like protein 3
translation: MDLRVRGAHTPLRTTTKGRLEAVTCLCPAAPGEGAEDADSGNESRSGGEDTHVCEKCCAEFFKWADLLAHKEACTKNPLVLIVGEDEPAPPSEDFPEASPASSASERADSEAAEEAAAAAAAAPEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPEPAPGAAYGMPSTNVTLETLLSTKVAVAQFSQTSRAAGAAGPGGGVAAAALPLILEQLVALQQQQVQQLQLIEQIRSQVALMSRPLPPSRPPLHPGPAAHPTLPLSAGTGPAATAQGPAAPPAAYEGPQHLAAPASTASTPHVAGGGPSVPEPGAPACSGAPATSTASTPVXXXXXXXXXPQNAPTPPALGPGPLLTSTPSLPSPLLPQTSASTVIFPNPLVSIAATANALDPLSALMKHRKGKPPNVSVFEPKASTEDPFFXHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEYLDNVPTCSGIPYGMSLPPEKPVTTWLDSKPALPTVPTSVGLQLPPTLPGVGVGSYVDSPSLTPASRSPQRPSPASSECPSLSPGLTSSEAGVPVAAGSPQPAPGGSSLPKTEPVSLPCTNARVGDLPATAGQVSTTSALADSSASPGLCSPVLPAGAEPFKAKFPFGGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHFGVHRAKPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPLPEGFQDAMDAVLPYDDKAADALSACDDDMDDNSLEDDAELKDAAGDPNKPLLAFSGSCPPSPPSVISSIAALENQMKMMDSVMSCPQLSALKSLENGSGESDRLSNDSSSAVGDLESRSAGSPALSESSSSLQALSPGNSNSESLPSKSPGLGAQEEPQETPLKTEKPDSPLPGPENGGALDLTATHPCRPSVKEEAPFSLLFLSRDRGKCASTVCRVCAKPFACRSALEIHLRSHTKERPFVCAVCGRGCSTLGNLKQHLLTHRLRELPPQLLDPNFTLGPSQGTPSLGPGSTPTTIKTEVNGHSKAGLLAEGPPLPAAVQVPPGPPTVMSPGLAPMLAPPPRRTPKQHNCQSCGKTFSSASALQIHERTHTGEKPFGCTICGRAFTTKGNLKVHMGTHMWNNAPARRGRRLSVENPMALLGGDALKFSEMFQKDLAARAMNVDPSFWNQYAAAITNGLAMKNNEISVIQNGGLPQLPVSLSGSALPPLGSLAAGLDKARPGSSPPIAGLDKANSDTGGSRPFTRFIEDNKEIGIN
SIO_010081: SALL3
subclass of: SO_0000673
so part of: SALL3
location: complement(join(795202..795633,796696..800156,801513..801597))
location: region:795202-801597:-1
so has part: feature:801513-801597:-1:exon
so has part: feature:796696-800156:-1:exon
so has part: feature:795202-795633:-1:exon

XP_019841961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:801513-801597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:796696-800156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:795202-795633:-1:exon

LOC109577733
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1558578..1559117)
location: region:1558578-1559117:-1
so has part: feature:1558578-1559117:-1:exon

109577733
type: Gene
SIO_000068: ncbigene

position:1558578:-1
position: 1558578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1559117:-1
position: 1559117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1558578-1559117:-1:exon

LOC109577733
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109577733
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC109577733
subclass of: SO_0000673
so part of: LOC109577733
location: complement(1558578..1558746)
location: region:1558578-1558746:-1
so has part: feature:1558578-1558746:-1:exon

position:1558746:-1
position: 1558746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1558578-1558746:-1:exon

LOC109577733
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109577733
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC109577733
subclass of: SO_0000673
so part of: LOC109577733
location: complement(1558907..1559117)
location: region:1558907-1559117:-1
so has part: feature:1558907-1559117:-1:exon

position:1558907:-1
position: 1558907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1558907-1559117:-1:exon

GALR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: GALR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1937718..1950808)
location: region:1937718-1950808:-1
so has part: feature:1937718-1950808:-1:exon
subclass of: SO_0000010

109578009
type: Gene
SIO_000068: ncbigene

position:1937718:-1
position: 1937718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1950808:-1
position: 1950808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1937718-1950808:-1:exon

GALR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: GALR1
product: galanin receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_019987007.1
SIO_010081: GALR1
subclass of: SO_0000673
so part of: GALR1
location: complement(join(1937718..1940105,1945578..1945643,1950057..1950808))
location: region:1937718-1950808:-1
so has part: feature:1950057-1950808:-1:exon
so has part: feature:1945578-1945643:-1:exon
so has part: feature:1937718-1940105:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1950057-1950808:-1:exon

position:1950057:-1
position: 1950057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1945578-1945643:-1:exon

position:1945578:-1
position: 1945578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1945643:-1
position: 1945643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1937718-1940105:-1:exon

position:1940105:-1
position: 1940105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GALR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: GALR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galanin receptor type 1
translation: MELEVGNFSEGNASGLEPPTPDPRPLFGIGVENFVTLVVFGLIFALGVLGNSLVITVLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYALPTWVLGAFICKFIHYFFTVSMLVSIFTLAAMSVDRYVAIVHSRRSSALRVSRNALLGVGFIWALSIAMASPVAYHQRLFHRDVSNQTFCWEQWPNQRHKKAYVVCTFVFGYLLPLLLICFCYAKVLNHLHKKLKNVSKKSEASKKKTAQTVLVVVVVFGVSWLPHHVIHLWAEFGVFPLTPASFFFRITAHCLAYSNSSVNPIIYAFLSENFRKAYKQVFKCHARKESPLNDTKENKSRLDTPPSTNCTHV
SIO_010081: GALR1
subclass of: SO_0000673
so part of: GALR1
location: complement(join(1939788..1940105,1945578..1945643,1950057..1950722))
location: region:1939788-1950722:-1
so has part: feature:1950057-1950722:-1:exon
so has part: feature:1945578-1945643:-1:exon
so has part: feature:1939788-1940105:-1:exon

XP_019842566.1
type: Protein
SIO_000068: ncbiprotein

position:1939788:-1
position: 1939788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1950722:-1
position: 1950722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1950057-1950722:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1945578-1945643:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1939788-1940105:-1:exon

MBP
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2018904..2123045
location: region:2018904-2123045:1
so has part: feature:2018904-2123045:1:exon
subclass of: SO_0000010

109577769
type: Gene
SIO_000068: ncbigene

position:2018904:1
position: 2018904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2123045:1
position: 2123045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2018904-2123045:1:exon

MBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBP
product: myelin basic protein, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1111 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_019986568.1
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2018904..2018995,2042658..2042731,2062313..2062400,2090413..2090843,2111840..2111947,2112894..2112929,2113304..2113336,2117025..2117144,2121682..2123045)
location: region:2018904-2123045:1
so has part: feature:2018904-2018995:1:exon
so has part: feature:2042658-2042731:1:exon
so has part: feature:2062313-2062400:1:exon
so has part: feature:2090413-2090843:1:exon
so has part: feature:2111840-2111947:1:exon
so has part: feature:2112894-2112929:1:exon
so has part: feature:2113304-2113336:1:exon
so has part: feature:2117025-2117144:1:exon
so has part: feature:2121682-2123045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2018904-2018995:1:exon

position:2018995:1
position: 2018995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2042658-2042731:1:exon

position:2042658:1
position: 2042658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2042731:1
position: 2042731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2062313-2062400:1:exon

position:2062313:1
position: 2062313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2062400:1
position: 2062400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2090413-2090843:1:exon

position:2090413:1
position: 2090413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2090843:1
position: 2090843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2111840-2111947:1:exon

position:2111840:1
position: 2111840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2111947:1
position: 2111947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2112894-2112929:1:exon

position:2112894:1
position: 2112894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2112929:1
position: 2112929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2113304-2113336:1:exon

position:2113304:1
position: 2113304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2113336:1
position: 2113336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2117025-2117144:1:exon

position:2117025:1
position: 2117025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2117144:1
position: 2117144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2121682-2123045:1:exon

position:2121682:1
position: 2121682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBP
product: myelin basic protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1113 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_019986565.1
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2018904..2018995,2042658..2042731,2062313..2062400,2090413..2090843,2097224..2097301,2111840..2111947,2112894..2112929,2113304..2113336,2117025..2117144,2121682..2123041)
location: region:2018904-2123041:1
so has part: feature:2018904-2018995:1:exon
so has part: feature:2042658-2042731:1:exon
so has part: feature:2062313-2062400:1:exon
so has part: feature:2090413-2090843:1:exon
so has part: feature:2097224-2097301:1:exon
so has part: feature:2111840-2111947:1:exon
so has part: feature:2112894-2112929:1:exon
so has part: feature:2113304-2113336:1:exon
so has part: feature:2117025-2117144:1:exon
so has part: feature:2121682-2123041:1:exon

position:2123041:1
position: 2123041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2018904-2018995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2042658-2042731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2062313-2062400:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2090413-2090843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2097224-2097301:1:exon

position:2097224:1
position: 2097224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2097301:1
position: 2097301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2111840-2111947:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2112894-2112929:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2113304-2113336:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2117025-2117144:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2121682-2123041:1:exon

LOC109577770
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2041240..2053376)
location: region:2041240-2053376:-1
so has part: feature:2041240-2053376:-1:exon
subclass of: SO_0000011

109577770
type: Gene
SIO_000068: ncbigene

position:2041240:-1
position: 2041240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2053376:-1
position: 2053376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2041240-2053376:-1:exon

LOC109577770
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109577770
product: uncharacterized LOC109577770, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XR_002183583.1
SIO_010081: LOC109577770
subclass of: SO_0000673
so part of: LOC109577770
location: complement(join(2041240..2041705,2045538..2045676,2048419..2049349,2052255..2052522,2052934..2053376))
location: region:2041240-2053376:-1
so has part: feature:2052934-2053376:-1:exon
so has part: feature:2052255-2052522:-1:exon
so has part: feature:2048419-2049349:-1:exon
so has part: feature:2045538-2045676:-1:exon
so has part: feature:2041240-2041705:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2052934-2053376:-1:exon

position:2052934:-1
position: 2052934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2052255-2052522:-1:exon

position:2052255:-1
position: 2052255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2052522:-1
position: 2052522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2048419-2049349:-1:exon

position:2048419:-1
position: 2048419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2049349:-1
position: 2049349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2045538-2045676:-1:exon

position:2045538:-1
position: 2045538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2045676:-1
position: 2045676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2041240-2041705:-1:exon

position:2041705:-1
position: 2041705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109577770
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109577770
product: uncharacterized LOC109577770, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 128 samples with support for all annotated introns
transcript id: XR_002183582.1
SIO_010081: LOC109577770
subclass of: SO_0000673
so part of: LOC109577770
location: complement(join(2041240..2041705,2045538..2045676,2049178..2049349,2052255..2052927))
location: region:2041240-2052927:-1
so has part: feature:2052255-2052927:-1:exon
so has part: feature:2049178-2049349:-1:exon
so has part: feature:2045538-2045676:-1:exon
so has part: feature:2041240-2041705:-1:exon

position:2052927:-1
position: 2052927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2052255-2052927:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2049178-2049349:-1:exon

position:2049178:-1
position: 2049178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2045538-2045676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2041240-2041705:-1:exon

LOC109577770
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109577770
product: uncharacterized LOC109577770, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XR_002183584.1
SIO_010081: LOC109577770
subclass of: SO_0000673
so part of: LOC109577770
location: complement(join(2041240..2041705,2048419..2049349,2052255..2052927))
location: region:2041240-2052927:-1
so has part: feature:2052255-2052927:-1:exon
so has part: feature:2048419-2049349:-1:exon
so has part: feature:2041240-2041705:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2052255-2052927:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2048419-2049349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2041240-2041705:-1:exon

LOC109577770
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109577770
product: uncharacterized LOC109577770, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XR_002183581.1
SIO_010081: LOC109577770
subclass of: SO_0000673
so part of: LOC109577770
location: complement(join(2041240..2041705,2045538..2045676,2048419..2049349,2052255..2052927))
location: region:2041240-2052927:-1
so has part: feature:2052255-2052927:-1:exon
so has part: feature:2048419-2049349:-1:exon
so has part: feature:2045538-2045676:-1:exon
so has part: feature:2041240-2041705:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2052255-2052927:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2048419-2049349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2045538-2045676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2041240-2041705:-1:exon

MBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBP
product: myelin basic protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1113 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_019986561.1
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2042107..2042731,2062313..2062400,2090413..2090843,2097224..2097301,2111840..2111947,2112894..2112929,2113304..2113336,2117025..2117144,2121682..2123041)
location: region:2042107-2123041:1
so has part: feature:2042107-2042731:1:exon
so has part: feature:2062313-2062400:1:exon
so has part: feature:2090413-2090843:1:exon
so has part: feature:2097224-2097301:1:exon
so has part: feature:2111840-2111947:1:exon
so has part: feature:2112894-2112929:1:exon
so has part: feature:2113304-2113336:1:exon
so has part: feature:2117025-2117144:1:exon
so has part: feature:2121682-2123041:1:exon

position:2042107:1
position: 2042107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2042107-2042731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2062313-2062400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090413-2090843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2097224-2097301:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2111840-2111947:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2112894-2112929:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2113304-2113336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2117025-2117144:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2121682-2123041:1:exon

MBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBP
product: myelin basic protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 947 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019986562.1
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2042107..2042731,2062313..2062400,2090413..2090843,2097224..2097301,2111840..2111947,2112894..2112929,2117025..2117144,2121682..2123041)
location: region:2042107-2123041:1
so has part: feature:2042107-2042731:1:exon
so has part: feature:2062313-2062400:1:exon
so has part: feature:2090413-2090843:1:exon
so has part: feature:2097224-2097301:1:exon
so has part: feature:2111840-2111947:1:exon
so has part: feature:2112894-2112929:1:exon
so has part: feature:2117025-2117144:1:exon
so has part: feature:2121682-2123041:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2042107-2042731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2062313-2062400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090413-2090843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2097224-2097301:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2111840-2111947:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2112894-2112929:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2117025-2117144:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2121682-2123041:1:exon

MBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBP
product: myelin basic protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 945 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_019986564.1
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2042112..2042731,2062313..2062400,2090413..2090843,2111840..2111947,2112894..2112929,2117025..2117144,2121682..2123041)
location: region:2042112-2123041:1
so has part: feature:2042112-2042731:1:exon
so has part: feature:2062313-2062400:1:exon
so has part: feature:2090413-2090843:1:exon
so has part: feature:2111840-2111947:1:exon
so has part: feature:2112894-2112929:1:exon
so has part: feature:2117025-2117144:1:exon
so has part: feature:2121682-2123041:1:exon

position:2042112:1
position: 2042112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2042112-2042731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2062313-2062400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090413-2090843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2111840-2111947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2112894-2112929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2117025-2117144:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2121682-2123041:1:exon

MBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBP
product: myelin basic protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1111 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_019986563.1
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2042115..2042731,2062313..2062400,2090413..2090843,2111840..2111947,2112894..2112929,2113304..2113336,2117025..2117144,2121682..2123041)
location: region:2042115-2123041:1
so has part: feature:2042115-2042731:1:exon
so has part: feature:2062313-2062400:1:exon
so has part: feature:2090413-2090843:1:exon
so has part: feature:2111840-2111947:1:exon
so has part: feature:2112894-2112929:1:exon
so has part: feature:2113304-2113336:1:exon
so has part: feature:2117025-2117144:1:exon
so has part: feature:2121682-2123041:1:exon

position:2042115:1
position: 2042115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2042115-2042731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2062313-2062400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090413-2090843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2111840-2111947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2112894-2112929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2113304-2113336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2117025-2117144:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2121682-2123041:1:exon

MBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X1
translation: MLPRRLQVPLEFGGFRFLSSETDVAFGTGLLFXLKNHVGNSXSTSSEANGLSFLSASEDSRLRMGNHAGKRDFGAEKGNKDSETNRGEHEKKRNTRDLSREISEDSDVFGAADVVPNNGAPSQDTAVTDSKRTADPKNAWPEASPADPGGRPHLVRLFSRDAPGREDNTFKDRPSESDELQTIQEDSAAAPGAVDAMAAQKRPSQRSKYLASASTMDHARHGFLPRHRDTGILDSLGRFFGSDRGAPKRGSGKVPWLKQSKSPLGPHARSPPGLCNMYQDGHHAARTTHYGSLPQKAQHGRPQDENPVVHFFKNIVTPRTPPPSQGKGRGLSLSRFSWGAEGQKPGFGYGGRASDYKSAHKGLKGHDAQGTLSKIFKLGGRDSRSGSPMARR
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2042492..2042731,2062313..2062400,2090413..2090843,2097224..2097301,2111840..2111947,2112894..2112929,2113304..2113336,2117025..2117144,2121682..2121726)
location: region:2042492-2121726:1
so has part: feature:2042492-2042731:1:exon
so has part: feature:2062313-2062400:1:exon
so has part: feature:2090413-2090843:1:exon
so has part: feature:2097224-2097301:1:exon
so has part: feature:2111840-2111947:1:exon
so has part: feature:2112894-2112929:1:exon
so has part: feature:2113304-2113336:1:exon
so has part: feature:2117025-2117144:1:exon
so has part: feature:2121682-2121726:1:exon

XP_019842120.1
type: Protein
SIO_000068: ncbiprotein

position:2042492:1
position: 2042492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2121726:1
position: 2121726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2042492-2042731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2062313-2062400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090413-2090843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2097224-2097301:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2111840-2111947:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2112894-2112929:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2113304-2113336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2117025-2117144:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2121682-2121726:1:exon

MBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X2
translation: MLPRRLQVPLEFGGFRFLSSETDVAFGTGLLFXLKNHVGNSXSTSSEANGLSFLSASEDSRLRMGNHAGKRDFGAEKGNKDSETNRGEHEKKRNTRDLSREISEDSDVFGAADVVPNNGAPSQDTAVTDSKRTADPKNAWPEASPADPGGRPHLVRLFSRDAPGREDNTFKDRPSESDELQTIQEDSAAAPGAVDAMAAQKRPSQRSKYLASASTMDHARHGFLPRHRDTGILDSLGRFFGSDRGAPKRGSGKVPWLKQSKSPLGPHARSPPGLCNMYQDGHHAARTTHYGSLPQKAQHGRPQDENPVVHFFKNIVTPRTPPPSQGKGAEGQKPGFGYGGRASDYKSAHKGLKGHDAQGTLSKIFKLGGRDSRSGSPMARR
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2042492..2042731,2062313..2062400,2090413..2090843,2097224..2097301,2111840..2111947,2112894..2112929,2117025..2117144,2121682..2121726)
location: region:2042492-2121726:1
so has part: feature:2042492-2042731:1:exon
so has part: feature:2062313-2062400:1:exon
so has part: feature:2090413-2090843:1:exon
so has part: feature:2097224-2097301:1:exon
so has part: feature:2111840-2111947:1:exon
so has part: feature:2112894-2112929:1:exon
so has part: feature:2117025-2117144:1:exon
so has part: feature:2121682-2121726:1:exon

XP_019842121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2042492-2042731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2062313-2062400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090413-2090843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2097224-2097301:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2111840-2111947:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2112894-2112929:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2117025-2117144:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2121682-2121726:1:exon

MBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X3
translation: MLPRRLQVPLEFGGFRFLSSETDVAFGTGLLFXLKNHVGNSXSTSSEANGLSFLSASEDSRLRMGNHAGKRDFGAEKGNKDSETNRGEHEKKRNTRDLSREISEDSDVFGAADVVPNNGAPSQDTAVTDSKRTADPKNAWPEASPADPGGRPHLVRLFSRDAPGREDNTFKDRPSESDELQTIQEDSAAAPGAVDAMAAQKRPSQRSKYLASASTMDHARHGFLPRHRDTGILDSLGRFFGSDRGAPKRGSGKDGHHAARTTHYGSLPQKAQHGRPQDENPVVHFFKNIVTPRTPPPSQGKGRGLSLSRFSWGAEGQKPGFGYGGRASDYKSAHKGLKGHDAQGTLSKIFKLGGRDSRSGSPMARR
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2042492..2042731,2062313..2062400,2090413..2090843,2111840..2111947,2112894..2112929,2113304..2113336,2117025..2117144,2121682..2121726)
location: region:2042492-2121726:1
so has part: feature:2042492-2042731:1:exon
so has part: feature:2062313-2062400:1:exon
so has part: feature:2090413-2090843:1:exon
so has part: feature:2111840-2111947:1:exon
so has part: feature:2112894-2112929:1:exon
so has part: feature:2113304-2113336:1:exon
so has part: feature:2117025-2117144:1:exon
so has part: feature:2121682-2121726:1:exon

XP_019842122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2042492-2042731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2062313-2062400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090413-2090843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2111840-2111947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2112894-2112929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2113304-2113336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2117025-2117144:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2121682-2121726:1:exon

MBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X4
translation: MLPRRLQVPLEFGGFRFLSSETDVAFGTGLLFXLKNHVGNSXSTSSEANGLSFLSASEDSRLRMGNHAGKRDFGAEKGNKDSETNRGEHEKKRNTRDLSREISEDSDVFGAADVVPNNGAPSQDTAVTDSKRTADPKNAWPEASPADPGGRPHLVRLFSRDAPGREDNTFKDRPSESDELQTIQEDSAAAPGAVDAMAAQKRPSQRSKYLASASTMDHARHGFLPRHRDTGILDSLGRFFGSDRGAPKRGSGKDGHHAARTTHYGSLPQKAQHGRPQDENPVVHFFKNIVTPRTPPPSQGKGAEGQKPGFGYGGRASDYKSAHKGLKGHDAQGTLSKIFKLGGRDSRSGSPMARR
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2042492..2042731,2062313..2062400,2090413..2090843,2111840..2111947,2112894..2112929,2117025..2117144,2121682..2121726)
location: region:2042492-2121726:1
so has part: feature:2042492-2042731:1:exon
so has part: feature:2062313-2062400:1:exon
so has part: feature:2090413-2090843:1:exon
so has part: feature:2111840-2111947:1:exon
so has part: feature:2112894-2112929:1:exon
so has part: feature:2117025-2117144:1:exon
so has part: feature:2121682-2121726:1:exon

XP_019842123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2042492-2042731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2062313-2062400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090413-2090843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2111840-2111947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2112894-2112929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2117025-2117144:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2121682-2121726:1:exon

MBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X5
translation: MGNHAGKRDFGAEKGNKDSETNRGEHEKKRNTRDLSREISEDSDVFGAADVVPNNGAPSQDTAVTDSKRTADPKNAWPEASPADPGGRPHLVRLFSRDAPGREDNTFKDRPSESDELQTIQEDSAAAPGAVDAMAAQKRPSQRSKYLASASTMDHARHGFLPRHRDTGILDSLGRFFGSDRGAPKRGSGKVPWLKQSKSPLGPHARSPPGLCNMYQDGHHAARTTHYGSLPQKAQHGRPQDENPVVHFFKNIVTPRTPPPSQGKGRGLSLSRFSWGAEGQKPGFGYGGRASDYKSAHKGLKGHDAQGTLSKIFKLGGRDSRSGSPMARR
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2042681..2042731,2062313..2062400,2090413..2090843,2097224..2097301,2111840..2111947,2112894..2112929,2113304..2113336,2117025..2117144,2121682..2121726)
location: region:2042681-2121726:1
so has part: feature:2042681-2042731:1:exon
so has part: feature:2062313-2062400:1:exon
so has part: feature:2090413-2090843:1:exon
so has part: feature:2097224-2097301:1:exon
so has part: feature:2111840-2111947:1:exon
so has part: feature:2112894-2112929:1:exon
so has part: feature:2113304-2113336:1:exon
so has part: feature:2117025-2117144:1:exon
so has part: feature:2121682-2121726:1:exon

XP_019842124.1
type: Protein
SIO_000068: ncbiprotein

position:2042681:1
position: 2042681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2042681-2042731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2062313-2062400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090413-2090843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2097224-2097301:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2111840-2111947:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2112894-2112929:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2113304-2113336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2117025-2117144:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2121682-2121726:1:exon

MBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X7
translation: MGNHAGKRDFGAEKGNKDSETNRGEHEKKRNTRDLSREISEDSDVFGAADVVPNNGAPSQDTAVTDSKRTADPKNAWPEASPADPGGRPHLVRLFSRDAPGREDNTFKDRPSESDELQTIQEDSAAAPGAVDAMAAQKRPSQRSKYLASASTMDHARHGFLPRHRDTGILDSLGRFFGSDRGAPKRGSGKDGHHAARTTHYGSLPQKAQHGRPQDENPVVHFFKNIVTPRTPPPSQGKGRGLSLSRFSWGAEGQKPGFGYGGRASDYKSAHKGLKGHDAQGTLSKIFKLGGRDSRSGSPMARR
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2042681..2042731,2062313..2062400,2090413..2090843,2111840..2111947,2112894..2112929,2113304..2113336,2117025..2117144,2121682..2121726)
location: region:2042681-2121726:1
so has part: feature:2042681-2042731:1:exon
so has part: feature:2062313-2062400:1:exon
so has part: feature:2090413-2090843:1:exon
so has part: feature:2111840-2111947:1:exon
so has part: feature:2112894-2112929:1:exon
so has part: feature:2113304-2113336:1:exon
so has part: feature:2117025-2117144:1:exon
so has part: feature:2121682-2121726:1:exon

XP_019842127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2042681-2042731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2062313-2062400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090413-2090843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2111840-2111947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2112894-2112929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2113304-2113336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2117025-2117144:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2121682-2121726:1:exon

MBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MBP
product: myelin basic protein, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1113 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019986567.1
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2053506..2053630,2062313..2062400,2090413..2090843,2097224..2097301,2111840..2111947,2112894..2112929,2113304..2113336,2117025..2117144,2121682..2123041)
location: region:2053506-2123041:1
so has part: feature:2053506-2053630:1:exon
so has part: feature:2062313-2062400:1:exon
so has part: feature:2090413-2090843:1:exon
so has part: feature:2097224-2097301:1:exon
so has part: feature:2111840-2111947:1:exon
so has part: feature:2112894-2112929:1:exon
so has part: feature:2113304-2113336:1:exon
so has part: feature:2117025-2117144:1:exon
so has part: feature:2121682-2123041:1:exon

position:2053506:1
position: 2053506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2053506-2053630:1:exon

position:2053630:1
position: 2053630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2062313-2062400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090413-2090843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2097224-2097301:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2111840-2111947:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2112894-2112929:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2113304-2113336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2117025-2117144:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2121682-2123041:1:exon

MBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X6
translation: MLLNGLPETVALKDSETNRGEHEKKRNTRDLSREISEDSDVFGAADVVPNNGAPSQDTAVTDSKRTADPKNAWPEASPADPGGRPHLVRLFSRDAPGREDNTFKDRPSESDELQTIQEDSAAAPGAVDAMAAQKRPSQRSKYLASASTMDHARHGFLPRHRDTGILDSLGRFFGSDRGAPKRGSGKVPWLKQSKSPLGPHARSPPGLCNMYQDGHHAARTTHYGSLPQKAQHGRPQDENPVVHFFKNIVTPRTPPPSQGKGRGLSLSRFSWGAEGQKPGFGYGGRASDYKSAHKGLKGHDAQGTLSKIFKLGGRDSRSGSPMARR
SIO_010081: MBP
subclass of: SO_0000673
so part of: MBP
location: join(2053592..2053630,2062313..2062400,2090413..2090843,2097224..2097301,2111840..2111947,2112894..2112929,2113304..2113336,2117025..2117144,2121682..2121726)
location: region:2053592-2121726:1
so has part: feature:2053592-2053630:1:exon
so has part: feature:2062313-2062400:1:exon
so has part: feature:2090413-2090843:1:exon
so has part: feature:2097224-2097301:1:exon
so has part: feature:2111840-2111947:1:exon
so has part: feature:2112894-2112929:1:exon
so has part: feature:2113304-2113336:1:exon
so has part: feature:2117025-2117144:1:exon
so has part: feature:2121682-2121726:1:exon

XP_019842126.1
type: Protein
SIO_000068: ncbiprotein

position:2053592:1
position: 2053592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2053592-2053630:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2062313-2062400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090413-2090843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2097224-2097301:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2111840-2111947:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2112894-2112929:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2113304-2113336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2117025-2117144:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2121682-2121726:1:exon

ZNF236
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2128643..2188057)
location: region:2128643-2188057:-1
so has part: feature:2128643-2188057:-1:exon
subclass of: SO_0000010

109577858
type: Gene
SIO_000068: ncbigene

position:2128643:-1
position: 2128643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2188057:-1
position: 2188057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2128643-2188057:-1:exon

ZNF236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF236
product: zinc finger protein 236, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019986776.1
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2128643..2131118,2132003..2132179,2134210..2134339,2135653..2135850,2137842..2137970,2139684..2139871,2144902..2145057,2147675..2147716,2148101..2148280,2148670..2148910,2149000..2149145,2150109..2150474,2151046..2151149,2152557..2152839,2154453..2154665,2155413..2155564,2158528..2158631,2160024..2160175,2161617..2161870,2163063..2163323,2164602..2164743,2167482..2167685,2168355..2168627,2174042..2174270,2175428..2175631,2177224..2177367,2179485..2179657,2179957..2180081,2180761..2180939,2185925..2186089,2187255..2188055))
location: region:2128643-2188055:-1
so has part: feature:2187255-2188055:-1:exon
so has part: feature:2185925-2186089:-1:exon
so has part: feature:2180761-2180939:-1:exon
so has part: feature:2179957-2180081:-1:exon
so has part: feature:2179485-2179657:-1:exon
so has part: feature:2177224-2177367:-1:exon
so has part: feature:2175428-2175631:-1:exon
so has part: feature:2174042-2174270:-1:exon
so has part: feature:2168355-2168627:-1:exon
so has part: feature:2167482-2167685:-1:exon
so has part: feature:2164602-2164743:-1:exon
so has part: feature:2163063-2163323:-1:exon
so has part: feature:2161617-2161870:-1:exon
so has part: feature:2160024-2160175:-1:exon
so has part: feature:2158528-2158631:-1:exon
so has part: feature:2155413-2155564:-1:exon
so has part: feature:2154453-2154665:-1:exon
so has part: feature:2152557-2152839:-1:exon
so has part: feature:2151046-2151149:-1:exon
so has part: feature:2150109-2150474:-1:exon
so has part: feature:2149000-2149145:-1:exon
so has part: feature:2148670-2148910:-1:exon
so has part: feature:2148101-2148280:-1:exon
so has part: feature:2147675-2147716:-1:exon
so has part: feature:2144902-2145057:-1:exon
so has part: feature:2139684-2139871:-1:exon
so has part: feature:2137842-2137970:-1:exon
so has part: feature:2135653-2135850:-1:exon
so has part: feature:2134210-2134339:-1:exon
so has part: feature:2132003-2132179:-1:exon
so has part: feature:2128643-2131118:-1:exon

position:2188055:-1
position: 2188055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2187255-2188055:-1:exon

position:2187255:-1
position: 2187255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2185925-2186089:-1:exon

position:2185925:-1
position: 2185925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2186089:-1
position: 2186089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2180761-2180939:-1:exon

position:2180761:-1
position: 2180761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2180939:-1
position: 2180939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2179957-2180081:-1:exon

position:2179957:-1
position: 2179957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2180081:-1
position: 2180081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2179485-2179657:-1:exon

position:2179485:-1
position: 2179485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2179657:-1
position: 2179657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2177224-2177367:-1:exon

position:2177224:-1
position: 2177224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2177367:-1
position: 2177367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2175428-2175631:-1:exon

position:2175428:-1
position: 2175428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2175631:-1
position: 2175631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2174042-2174270:-1:exon

position:2174042:-1
position: 2174042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2174270:-1
position: 2174270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2168355-2168627:-1:exon

position:2168355:-1
position: 2168355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2168627:-1
position: 2168627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2167482-2167685:-1:exon

position:2167482:-1
position: 2167482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2167685:-1
position: 2167685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2164602-2164743:-1:exon

position:2164602:-1
position: 2164602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2164743:-1
position: 2164743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2163063-2163323:-1:exon

position:2163063:-1
position: 2163063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2163323:-1
position: 2163323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2161617-2161870:-1:exon

position:2161617:-1
position: 2161617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2161870:-1
position: 2161870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2160024-2160175:-1:exon

position:2160024:-1
position: 2160024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2160175:-1
position: 2160175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2158528-2158631:-1:exon

position:2158528:-1
position: 2158528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2158631:-1
position: 2158631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2155413-2155564:-1:exon

position:2155413:-1
position: 2155413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2155564:-1
position: 2155564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2154453-2154665:-1:exon

position:2154453:-1
position: 2154453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2154665:-1
position: 2154665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2152557-2152839:-1:exon

position:2152557:-1
position: 2152557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2152839:-1
position: 2152839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2151046-2151149:-1:exon

position:2151046:-1
position: 2151046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2151149:-1
position: 2151149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2150109-2150474:-1:exon

position:2150109:-1
position: 2150109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2150474:-1
position: 2150474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2149000-2149145:-1:exon

position:2149000:-1
position: 2149000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2149145:-1
position: 2149145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2148670-2148910:-1:exon

position:2148670:-1
position: 2148670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2148910:-1
position: 2148910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2148101-2148280:-1:exon

position:2148101:-1
position: 2148101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2148280:-1
position: 2148280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2147675-2147716:-1:exon

position:2147675:-1
position: 2147675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2147716:-1
position: 2147716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2144902-2145057:-1:exon

position:2144902:-1
position: 2144902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2145057:-1
position: 2145057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2139684-2139871:-1:exon

position:2139684:-1
position: 2139684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2139871:-1
position: 2139871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2137842-2137970:-1:exon

position:2137842:-1
position: 2137842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2137970:-1
position: 2137970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2135653-2135850:-1:exon

position:2135653:-1
position: 2135653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2135850:-1
position: 2135850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2134210-2134339:-1:exon

position:2134210:-1
position: 2134210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2134339:-1
position: 2134339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2132003-2132179:-1:exon

position:2132003:-1
position: 2132003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2132179:-1
position: 2132179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2128643-2131118:-1:exon

position:2131118:-1
position: 2131118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF236
product: zinc finger protein 236, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_019986774.1
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2128643..2131118,2132003..2132179,2134210..2134339,2135653..2135850,2137842..2137970,2139684..2139871,2144902..2145057,2148101..2148280,2148670..2148910,2149000..2149145,2150109..2150474,2151046..2151149,2152557..2152839,2154453..2154665,2155413..2155564,2158528..2158631,2160024..2160175,2160852..2160953,2161617..2161870,2163063..2163323,2164602..2164743,2167482..2167685,2168355..2168627,2174042..2174270,2175428..2175631,2177224..2177367,2179485..2179657,2179957..2180081,2180761..2180939,2185925..2186089,2187255..2188055))
location: region:2128643-2188055:-1
so has part: feature:2187255-2188055:-1:exon
so has part: feature:2185925-2186089:-1:exon
so has part: feature:2180761-2180939:-1:exon
so has part: feature:2179957-2180081:-1:exon
so has part: feature:2179485-2179657:-1:exon
so has part: feature:2177224-2177367:-1:exon
so has part: feature:2175428-2175631:-1:exon
so has part: feature:2174042-2174270:-1:exon
so has part: feature:2168355-2168627:-1:exon
so has part: feature:2167482-2167685:-1:exon
so has part: feature:2164602-2164743:-1:exon
so has part: feature:2163063-2163323:-1:exon
so has part: feature:2161617-2161870:-1:exon
so has part: feature:2160852-2160953:-1:exon
so has part: feature:2160024-2160175:-1:exon
so has part: feature:2158528-2158631:-1:exon
so has part: feature:2155413-2155564:-1:exon
so has part: feature:2154453-2154665:-1:exon
so has part: feature:2152557-2152839:-1:exon
so has part: feature:2151046-2151149:-1:exon
so has part: feature:2150109-2150474:-1:exon
so has part: feature:2149000-2149145:-1:exon
so has part: feature:2148670-2148910:-1:exon
so has part: feature:2148101-2148280:-1:exon
so has part: feature:2144902-2145057:-1:exon
so has part: feature:2139684-2139871:-1:exon
so has part: feature:2137842-2137970:-1:exon
so has part: feature:2135653-2135850:-1:exon
so has part: feature:2134210-2134339:-1:exon
so has part: feature:2132003-2132179:-1:exon
so has part: feature:2128643-2131118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2187255-2188055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2185925-2186089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2180761-2180939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2179957-2180081:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2179485-2179657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2177224-2177367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2175428-2175631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2174042-2174270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2168355-2168627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2167482-2167685:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2164602-2164743:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2163063-2163323:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2161617-2161870:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2160852-2160953:-1:exon

position:2160852:-1
position: 2160852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2160953:-1
position: 2160953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2160024-2160175:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2158528-2158631:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2155413-2155564:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2154453-2154665:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2152557-2152839:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2151046-2151149:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2150109-2150474:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2149000-2149145:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2148670-2148910:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2148101-2148280:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2144902-2145057:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2139684-2139871:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2137842-2137970:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2135653-2135850:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2134210-2134339:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2132003-2132179:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2128643-2131118:-1:exon

ZNF236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF236
product: zinc finger protein 236, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_019986773.1
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2128643..2131118,2132003..2132179,2134210..2134339,2135653..2135850,2137842..2137970,2139684..2139871,2144902..2145057,2147675..2147716,2148101..2148280,2148670..2148910,2149000..2149145,2150109..2150474,2151046..2151149,2152557..2152839,2154453..2154665,2155413..2155564,2158528..2158631,2160024..2160175,2160852..2160953,2161617..2161870,2163063..2163323,2164602..2164743,2167482..2167685,2168355..2168627,2174042..2174270,2175428..2175631,2177224..2177367,2179485..2179657,2179957..2180081,2180761..2180939,2185925..2186089,2187255..2188055))
location: region:2128643-2188055:-1
so has part: feature:2187255-2188055:-1:exon
so has part: feature:2185925-2186089:-1:exon
so has part: feature:2180761-2180939:-1:exon
so has part: feature:2179957-2180081:-1:exon
so has part: feature:2179485-2179657:-1:exon
so has part: feature:2177224-2177367:-1:exon
so has part: feature:2175428-2175631:-1:exon
so has part: feature:2174042-2174270:-1:exon
so has part: feature:2168355-2168627:-1:exon
so has part: feature:2167482-2167685:-1:exon
so has part: feature:2164602-2164743:-1:exon
so has part: feature:2163063-2163323:-1:exon
so has part: feature:2161617-2161870:-1:exon
so has part: feature:2160852-2160953:-1:exon
so has part: feature:2160024-2160175:-1:exon
so has part: feature:2158528-2158631:-1:exon
so has part: feature:2155413-2155564:-1:exon
so has part: feature:2154453-2154665:-1:exon
so has part: feature:2152557-2152839:-1:exon
so has part: feature:2151046-2151149:-1:exon
so has part: feature:2150109-2150474:-1:exon
so has part: feature:2149000-2149145:-1:exon
so has part: feature:2148670-2148910:-1:exon
so has part: feature:2148101-2148280:-1:exon
so has part: feature:2147675-2147716:-1:exon
so has part: feature:2144902-2145057:-1:exon
so has part: feature:2139684-2139871:-1:exon
so has part: feature:2137842-2137970:-1:exon
so has part: feature:2135653-2135850:-1:exon
so has part: feature:2134210-2134339:-1:exon
so has part: feature:2132003-2132179:-1:exon
so has part: feature:2128643-2131118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2187255-2188055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2185925-2186089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2180761-2180939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2179957-2180081:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2179485-2179657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2177224-2177367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2175428-2175631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2174042-2174270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2168355-2168627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2167482-2167685:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2164602-2164743:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2163063-2163323:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2161617-2161870:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2160852-2160953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2160024-2160175:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2158528-2158631:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2155413-2155564:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2154453-2154665:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2152557-2152839:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2151046-2151149:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2150109-2150474:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2149000-2149145:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2148670-2148910:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2148101-2148280:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2147675-2147716:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2144902-2145057:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2139684-2139871:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2137842-2137970:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2135653-2135850:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2134210-2134339:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2132003-2132179:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2128643-2131118:-1:exon

ZNF236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 236 isoform X3
translation: MRDHERNDKPHRCDQCPQTFNVEFNLTLHKCTHNGEDPTCPVCNKKFSRVASLKAHVMLHEKEENLICSECGDEFTLQSQLAIHMEEHRQELAGSRTHTCKACRKEFETSSQLKEHMKTHYKIRVAGTRSYNRNIDRSSFTYSCPHCGKTFQKPSQLTRHVRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSAGATETAHVLTATLFQTLPLQQTDTQVPSAPGQQSSQVVTDVIQQLLELSEPGPVXASQPPQAAQQLSITVGINQDILQQALENSGLSSIPVAAHPSDPSHTKAAAAQGQTPDATSVSSEPADPTDTEQEKEQESPEKLDKKEKKIIKKKSPFLPGSIREENGVRWHVCPCCAKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHVASHFKHTELRKMRHQRKPAKVRVGKANVPVPDIPLQEPILITDVGLIQPIPRNQLFQSYFNNNFVNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQHQQASSMDDSTVDQQGMHVSTPMQVEIESEALQPSTEAVAANPGAMLELGPPHGVSAEEAGLGPQMAGQPLEAEEGFTVTDTYSQQTPFPPVQQLQDSSTLESQALSTSFHQQNLLPVPGTDTINVTTRLIQESPQEEMDLPPPRPPFLEETEEQSRRSYRCDYCSKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSVCSTAFTTNGSLTRHMATHVSAKPYRCPFCEQGFRTTMHCKKHMKTHQTAASGGSAPGDADGGEMGLEEEEDGSERSTSRKARPEVITFTEEETAQLAKIPPQESATVSEQVLVQSAAEKDRISEMKDRQAELEAEPKHANCCSYCPKSFKKPSDLVRHVRIHTGEKPYRCEECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQFHYKPDPKKARKPAPRAAAEGPQPVSAAPAPSADPGVFIMNSPVLTGQLDQSLLQPGLLGQAVLPASVSAGGDWTVSLTDGSLATLEGIQLQLAANLVGPNVQISGIDASTVNNITLQIDPSVLQQTLQQGNLLAQQLTAEPGLAPQGSSLQTPESTVPASVVIQPIPGLSLQPTVTSANLTIGPLSEQDSVLATSSSGTQDLSQVMTSQGLVSTSGGPHEITLTINNSSLSQVLAQAAGPAAATSSGPPQEITLTISEFFSDHVENNDRKIGQDLIQHSSNGSSELNGSIRLSAPTINNQSTGATLTISNDQLLSQSATLNSSELNATAGSLPPTTPLSPSAVSAQSLVMSSSAVGAEASVTLTLADTQGLLSGGLDTVTLNIASQGQQFPALLTDPSLSGPGGAGSPRVILVSPPAQPSSACEEITYQVTDVSASLAPGGAPEKEARLHACLECGCSFASAGLLLQHSKAAHGRERIHVCPVCRKAFKRATHLKEHMQTHQAGPSLSSQKPRVFKCDTCEKAFAKPSQLERHSRIHTGERPFHCTLCEKAFNQKSALQVHMKKHTGERPYKCDYCVMGFTQKSNMKLHMKRAHSYAGAVPEPVGQQDHGAEALSHALHLDEVVPEPASEWQALANVF
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2130994..2131118,2132003..2132179,2134210..2134339,2135653..2135850,2137842..2137970,2139684..2139871,2144902..2145057,2147675..2147716,2148101..2148280,2148670..2148910,2149000..2149145,2150109..2150474,2151046..2151149,2152557..2152839,2154453..2154665,2155413..2155564,2158528..2158631,2160024..2160175,2161617..2161870,2163063..2163323,2164602..2164743,2167482..2167685,2168355..2168627,2174042..2174270,2175428..2175631,2177224..2177367,2179485..2179657,2179957..2180081,2180761..2180939,2185925..2186089,2187255..2187281))
location: region:2130994-2187281:-1
so has part: feature:2187255-2187281:-1:exon
so has part: feature:2185925-2186089:-1:exon
so has part: feature:2180761-2180939:-1:exon
so has part: feature:2179957-2180081:-1:exon
so has part: feature:2179485-2179657:-1:exon
so has part: feature:2177224-2177367:-1:exon
so has part: feature:2175428-2175631:-1:exon
so has part: feature:2174042-2174270:-1:exon
so has part: feature:2168355-2168627:-1:exon
so has part: feature:2167482-2167685:-1:exon
so has part: feature:2164602-2164743:-1:exon
so has part: feature:2163063-2163323:-1:exon
so has part: feature:2161617-2161870:-1:exon
so has part: feature:2160024-2160175:-1:exon
so has part: feature:2158528-2158631:-1:exon
so has part: feature:2155413-2155564:-1:exon
so has part: feature:2154453-2154665:-1:exon
so has part: feature:2152557-2152839:-1:exon
so has part: feature:2151046-2151149:-1:exon
so has part: feature:2150109-2150474:-1:exon
so has part: feature:2149000-2149145:-1:exon
so has part: feature:2148670-2148910:-1:exon
so has part: feature:2148101-2148280:-1:exon
so has part: feature:2147675-2147716:-1:exon
so has part: feature:2144902-2145057:-1:exon
so has part: feature:2139684-2139871:-1:exon
so has part: feature:2137842-2137970:-1:exon
so has part: feature:2135653-2135850:-1:exon
so has part: feature:2134210-2134339:-1:exon
so has part: feature:2132003-2132179:-1:exon
so has part: feature:2130994-2131118:-1:exon

XP_019842335.1
type: Protein
SIO_000068: ncbiprotein

position:2130994:-1
position: 2130994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2187281:-1
position: 2187281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2187255-2187281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2185925-2186089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2180761-2180939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2179957-2180081:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2179485-2179657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2177224-2177367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2175428-2175631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2174042-2174270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2168355-2168627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2167482-2167685:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2164602-2164743:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2163063-2163323:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2161617-2161870:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2160024-2160175:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2158528-2158631:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2155413-2155564:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2154453-2154665:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2152557-2152839:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2151046-2151149:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2150109-2150474:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2149000-2149145:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2148670-2148910:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2148101-2148280:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2147675-2147716:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2144902-2145057:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2139684-2139871:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2137842-2137970:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2135653-2135850:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2134210-2134339:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2132003-2132179:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2130994-2131118:-1:exon

ZNF236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 236 isoform X2
translation: MRDHERNDKPHRCDQCPQTFNVEFNLTLHKCTHNGEDPTCPVCNKKFSRVASLKAHVMLHEKEENLICSECGDEFTLQSQLAIHMEEHRQELAGSRTHTCKACRKEFETSSQLKEHMKTHYKIRVAGTRSYNRNIDRSSFTYSCPHCGKTFQKPSQLTRHVRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSAGATETAHVLTATLFQTLPLQQTDTQVPSAPGQQSSQVVTDVIQQLLELSEPGPVXASQPPQAAQQLSITVGINQDILQQALENSGLSSIPVAAHPSDPSHTKAAAAQGQTPDATSVSSEPADPTDTEQEKEQESPEKLDKKEKKIIKKKSPFLPGSIREENGVRWHVCPCCAKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHVASHFKHTELRKMRHQRKPAKVRVGKANVPVPDIPLQEPILITDVGLIQPIPRNQLFQSYFNNNFVNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQHQQASSMDDSTVDQQGMHVSTPMQVEIESEALQPSTEAVAANPGAMLELGPPHGVSAEEAGLGPQMAGQPLEAEEDRFVAPQQALQGHMDQLHEQAPPQQSFEPAGLSQGFTVTDTYSQQTPFPPVQQLQDSSTLESQALSTSFHQQNLLPVPGTDTINVTTRLIQESPQEEMDLPPPRPPFLEETEEQSRRSYRCDYCSKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSVCSTAFTTNGSLTRHMATHVSAKPYRCPFCEQGFRTTMHCKKHMKTHQTAASGGSAPGDADGGEMGLEEEEDGSERSTSRKARPEVITFTEEETAQLAKIPPQESATVSEQVLVQSAAEKDRISEMKDRQAELEAEPKHANCCSYCPKSFKKPSDLVRHVRIHTGEKPYRCEECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQFHYKPDPKKARKPAPRAAAEGPQPVSAAPAPSADPGVFIMNSPVLTGQLDQSLLQPGLLGQAVLPASVSAGGDWTVSLTDGSLATLEGIQLQLAANLVGPNVQISGIDASTVNNITLQIDPSVLQQTLQQGNLLAQQLTAEPGLAPQGSSLQTPESTVPASVVIQPIPGLSLQPTVTSANLTIGPLSEQDSVLATSSSGTQDLSQVMTSQGLVSTSGGPHEITLTINNSSLSQVLAQAAGPAAATSSGPPQEITLTISGQDLIQHSSNGSSELNGSIRLSAPTINNQSTGATLTISNDQLLSQSATLNSSELNATAGSLPPTTPLSPSAVSAQSLVMSSSAVGAEASVTLTLADTQGLLSGGLDTVTLNIASQGQQFPALLTDPSLSGPGGAGSPRVILVSPPAQPSSACEEITYQVTDVSASLAPGGAPEKEARLHACLECGCSFASAGLLLQHSKAAHGRERIHVCPVCRKAFKRATHLKEHMQTHQAGPSLSSQKPRVFKCDTCEKAFAKPSQLERHSRIHTGERPFHCTLCEKAFNQKSALQVHMKKHTGERPYKCDYCVMGFTQKSNMKLHMKRAHSYAGAVPEPVGQQDHGAEALSHALHLDEVVPEPASEWQALANVF
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2130994..2131118,2132003..2132179,2134210..2134339,2135653..2135850,2137842..2137970,2139684..2139871,2144902..2145057,2148101..2148280,2148670..2148910,2149000..2149145,2150109..2150474,2151046..2151149,2152557..2152839,2154453..2154665,2155413..2155564,2158528..2158631,2160024..2160175,2160852..2160953,2161617..2161870,2163063..2163323,2164602..2164743,2167482..2167685,2168355..2168627,2174042..2174270,2175428..2175631,2177224..2177367,2179485..2179657,2179957..2180081,2180761..2180939,2185925..2186089,2187255..2187281))
location: region:2130994-2187281:-1
so has part: feature:2187255-2187281:-1:exon
so has part: feature:2185925-2186089:-1:exon
so has part: feature:2180761-2180939:-1:exon
so has part: feature:2179957-2180081:-1:exon
so has part: feature:2179485-2179657:-1:exon
so has part: feature:2177224-2177367:-1:exon
so has part: feature:2175428-2175631:-1:exon
so has part: feature:2174042-2174270:-1:exon
so has part: feature:2168355-2168627:-1:exon
so has part: feature:2167482-2167685:-1:exon
so has part: feature:2164602-2164743:-1:exon
so has part: feature:2163063-2163323:-1:exon
so has part: feature:2161617-2161870:-1:exon
so has part: feature:2160852-2160953:-1:exon
so has part: feature:2160024-2160175:-1:exon
so has part: feature:2158528-2158631:-1:exon
so has part: feature:2155413-2155564:-1:exon
so has part: feature:2154453-2154665:-1:exon
so has part: feature:2152557-2152839:-1:exon
so has part: feature:2151046-2151149:-1:exon
so has part: feature:2150109-2150474:-1:exon
so has part: feature:2149000-2149145:-1:exon
so has part: feature:2148670-2148910:-1:exon
so has part: feature:2148101-2148280:-1:exon
so has part: feature:2144902-2145057:-1:exon
so has part: feature:2139684-2139871:-1:exon
so has part: feature:2137842-2137970:-1:exon
so has part: feature:2135653-2135850:-1:exon
so has part: feature:2134210-2134339:-1:exon
so has part: feature:2132003-2132179:-1:exon
so has part: feature:2130994-2131118:-1:exon

XP_019842333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2187255-2187281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2185925-2186089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2180761-2180939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2179957-2180081:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2179485-2179657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2177224-2177367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2175428-2175631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2174042-2174270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2168355-2168627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2167482-2167685:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2164602-2164743:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2163063-2163323:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2161617-2161870:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2160852-2160953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2160024-2160175:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2158528-2158631:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2155413-2155564:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2154453-2154665:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2152557-2152839:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2151046-2151149:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2150109-2150474:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2149000-2149145:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2148670-2148910:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2148101-2148280:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2144902-2145057:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2139684-2139871:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2137842-2137970:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2135653-2135850:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2134210-2134339:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2132003-2132179:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2130994-2131118:-1:exon

ZNF236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 236 isoform X1
translation: MRDHERNDKPHRCDQCPQTFNVEFNLTLHKCTHNGEDPTCPVCNKKFSRVASLKAHVMLHEKEENLICSECGDEFTLQSQLAIHMEEHRQELAGSRTHTCKACRKEFETSSQLKEHMKTHYKIRVAGTRSYNRNIDRSSFTYSCPHCGKTFQKPSQLTRHVRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSAGATETAHVLTATLFQTLPLQQTDTQVPSAPGQQSSQVVTDVIQQLLELSEPGPVXASQPPQAAQQLSITVGINQDILQQALENSGLSSIPVAAHPSDPSHTKAAAAQGQTPDATSVSSEPADPTDTEQEKEQESPEKLDKKEKKIIKKKSPFLPGSIREENGVRWHVCPCCAKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHVASHFKHTELRKMRHQRKPAKVRVGKANVPVPDIPLQEPILITDVGLIQPIPRNQLFQSYFNNNFVNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQHQQASSMDDSTVDQQGMHVSTPMQVEIESEALQPSTEAVAANPGAMLELGPPHGVSAEEAGLGPQMAGQPLEAEEDRFVAPQQALQGHMDQLHEQAPPQQSFEPAGLSQGFTVTDTYSQQTPFPPVQQLQDSSTLESQALSTSFHQQNLLPVPGTDTINVTTRLIQESPQEEMDLPPPRPPFLEETEEQSRRSYRCDYCSKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSVCSTAFTTNGSLTRHMATHVSAKPYRCPFCEQGFRTTMHCKKHMKTHQTAASGGSAPGDADGGEMGLEEEEDGSERSTSRKARPEVITFTEEETAQLAKIPPQESATVSEQVLVQSAAEKDRISEMKDRQAELEAEPKHANCCSYCPKSFKKPSDLVRHVRIHTGEKPYRCEECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQFHYKPDPKKARKPAPRAAAEGPQPVSAAPAPSADPGVFIMNSPVLTGQLDQSLLQPGLLGQAVLPASVSAGGDWTVSLTDGSLATLEGIQLQLAANLVGPNVQISGIDASTVNNITLQIDPSVLQQTLQQGNLLAQQLTAEPGLAPQGSSLQTPESTVPASVVIQPIPGLSLQPTVTSANLTIGPLSEQDSVLATSSSGTQDLSQVMTSQGLVSTSGGPHEITLTINNSSLSQVLAQAAGPAAATSSGPPQEITLTISEFFSDHVENNDRKIGQDLIQHSSNGSSELNGSIRLSAPTINNQSTGATLTISNDQLLSQSATLNSSELNATAGSLPPTTPLSPSAVSAQSLVMSSSAVGAEASVTLTLADTQGLLSGGLDTVTLNIASQGQQFPALLTDPSLSGPGGAGSPRVILVSPPAQPSSACEEITYQVTDVSASLAPGGAPEKEARLHACLECGCSFASAGLLLQHSKAAHGRERIHVCPVCRKAFKRATHLKEHMQTHQAGPSLSSQKPRVFKCDTCEKAFAKPSQLERHSRIHTGERPFHCTLCEKAFNQKSALQVHMKKHTGERPYKCDYCVMGFTQKSNMKLHMKRAHSYAGAVPEPVGQQDHGAEALSHALHLDEVVPEPASEWQALANVF
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2130994..2131118,2132003..2132179,2134210..2134339,2135653..2135850,2137842..2137970,2139684..2139871,2144902..2145057,2147675..2147716,2148101..2148280,2148670..2148910,2149000..2149145,2150109..2150474,2151046..2151149,2152557..2152839,2154453..2154665,2155413..2155564,2158528..2158631,2160024..2160175,2160852..2160953,2161617..2161870,2163063..2163323,2164602..2164743,2167482..2167685,2168355..2168627,2174042..2174270,2175428..2175631,2177224..2177367,2179485..2179657,2179957..2180081,2180761..2180939,2185925..2186089,2187255..2187281))
location: region:2130994-2187281:-1
so has part: feature:2187255-2187281:-1:exon
so has part: feature:2185925-2186089:-1:exon
so has part: feature:2180761-2180939:-1:exon
so has part: feature:2179957-2180081:-1:exon
so has part: feature:2179485-2179657:-1:exon
so has part: feature:2177224-2177367:-1:exon
so has part: feature:2175428-2175631:-1:exon
so has part: feature:2174042-2174270:-1:exon
so has part: feature:2168355-2168627:-1:exon
so has part: feature:2167482-2167685:-1:exon
so has part: feature:2164602-2164743:-1:exon
so has part: feature:2163063-2163323:-1:exon
so has part: feature:2161617-2161870:-1:exon
so has part: feature:2160852-2160953:-1:exon
so has part: feature:2160024-2160175:-1:exon
so has part: feature:2158528-2158631:-1:exon
so has part: feature:2155413-2155564:-1:exon
so has part: feature:2154453-2154665:-1:exon
so has part: feature:2152557-2152839:-1:exon
so has part: feature:2151046-2151149:-1:exon
so has part: feature:2150109-2150474:-1:exon
so has part: feature:2149000-2149145:-1:exon
so has part: feature:2148670-2148910:-1:exon
so has part: feature:2148101-2148280:-1:exon
so has part: feature:2147675-2147716:-1:exon
so has part: feature:2144902-2145057:-1:exon
so has part: feature:2139684-2139871:-1:exon
so has part: feature:2137842-2137970:-1:exon
so has part: feature:2135653-2135850:-1:exon
so has part: feature:2134210-2134339:-1:exon
so has part: feature:2132003-2132179:-1:exon
so has part: feature:2130994-2131118:-1:exon

XP_019842332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2187255-2187281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2185925-2186089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2180761-2180939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2179957-2180081:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2179485-2179657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2177224-2177367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2175428-2175631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2174042-2174270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2168355-2168627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2167482-2167685:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2164602-2164743:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2163063-2163323:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2161617-2161870:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2160852-2160953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2160024-2160175:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2158528-2158631:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2155413-2155564:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2154453-2154665:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2152557-2152839:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2151046-2151149:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2150109-2150474:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2149000-2149145:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2148670-2148910:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2148101-2148280:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2147675-2147716:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2144902-2145057:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2139684-2139871:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2137842-2137970:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2135653-2135850:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2134210-2134339:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2132003-2132179:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2130994-2131118:-1:exon

ZNF236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF236
product: zinc finger protein 236, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_019986777.1
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2139779..2139871,2140767..2140833,2144902..2145057,2147675..2147716,2148101..2148280,2148670..2148910,2149000..2149145,2150109..2150474,2151046..2151149,2152557..2152839,2154453..2154665,2155413..2155564,2158528..2158631,2160024..2160175,2160852..2160953,2161617..2161870,2163063..2163323,2164602..2164743,2167482..2167685,2168355..2168627,2174042..2174270,2175428..2175631,2177224..2177367,2179485..2179657,2179957..2180081,2180761..2180939,2185925..2186089,2187255..2188057))
location: region:2139779-2188057:-1
so has part: feature:2187255-2188057:-1:exon
so has part: feature:2185925-2186089:-1:exon
so has part: feature:2180761-2180939:-1:exon
so has part: feature:2179957-2180081:-1:exon
so has part: feature:2179485-2179657:-1:exon
so has part: feature:2177224-2177367:-1:exon
so has part: feature:2175428-2175631:-1:exon
so has part: feature:2174042-2174270:-1:exon
so has part: feature:2168355-2168627:-1:exon
so has part: feature:2167482-2167685:-1:exon
so has part: feature:2164602-2164743:-1:exon
so has part: feature:2163063-2163323:-1:exon
so has part: feature:2161617-2161870:-1:exon
so has part: feature:2160852-2160953:-1:exon
so has part: feature:2160024-2160175:-1:exon
so has part: feature:2158528-2158631:-1:exon
so has part: feature:2155413-2155564:-1:exon
so has part: feature:2154453-2154665:-1:exon
so has part: feature:2152557-2152839:-1:exon
so has part: feature:2151046-2151149:-1:exon
so has part: feature:2150109-2150474:-1:exon
so has part: feature:2149000-2149145:-1:exon
so has part: feature:2148670-2148910:-1:exon
so has part: feature:2148101-2148280:-1:exon
so has part: feature:2147675-2147716:-1:exon
so has part: feature:2144902-2145057:-1:exon
so has part: feature:2140767-2140833:-1:exon
so has part: feature:2139779-2139871:-1:exon

position:2139779:-1
position: 2139779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2187255-2188057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2185925-2186089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2180761-2180939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2179957-2180081:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2179485-2179657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2177224-2177367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2175428-2175631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2174042-2174270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2168355-2168627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2167482-2167685:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2164602-2164743:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2163063-2163323:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2161617-2161870:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2160852-2160953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2160024-2160175:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2158528-2158631:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2155413-2155564:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2154453-2154665:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2152557-2152839:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2151046-2151149:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2150109-2150474:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2149000-2149145:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2148670-2148910:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2148101-2148280:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2147675-2147716:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2144902-2145057:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2140767-2140833:-1:exon

position:2140767:-1
position: 2140767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2140833:-1
position: 2140833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2139779-2139871:-1:exon

ZNF236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 236 isoform X4
translation: MRDHERNDKPHRCDQCPQTFNVEFNLTLHKCTHNGEDPTCPVCNKKFSRVASLKAHVMLHEKEENLICSECGDEFTLQSQLAIHMEEHRQELAGSRTHTCKACRKEFETSSQLKEHMKTHYKIRVAGTRSYNRNIDRSSFTYSCPHCGKTFQKPSQLTRHVRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSAGATETAHVLTATLFQTLPLQQTDTQVPSAPGQQSSQVVTDVIQQLLELSEPGPVXASQPPQAAQQLSITVGINQDILQQALENSGLSSIPVAAHPSDPSHTKAAAAQGQTPDATSVSSEPADPTDTEQEKEQESPEKLDKKEKKIIKKKSPFLPGSIREENGVRWHVCPCCAKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHVASHFKHTELRKMRHQRKPAKVRVGKANVPVPDIPLQEPILITDVGLIQPIPRNQLFQSYFNNNFVNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQHQQASSMDDSTVDQQGMHVSTPMQVEIESEALQPSTEAVAANPGAMLELGPPHGVSAEEAGLGPQMAGQPLEAEEDRFVAPQQALQGHMDQLHEQAPPQQSFEPAGLSQGFTVTDTYSQQTPFPPVQQLQDSSTLESQALSTSFHQQNLLPVPGTDTINVTTRLIQESPQEEMDLPPPRPPFLEETEEQSRRSYRCDYCSKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSVCSTAFTTNGSLTRHMATHVSAKPYRCPFCEQGFRTTMHCKKHMKTHQTAASGGSAPGDADGGEMGLEEEEDGSERSTSRKARPEVITFTEEETAQLAKIPPQESATVSEQVLVQSAAEKDRISEMKDRQAELEAEPKHANCCSYCPKSFKKPSDLVRHVRIHTGEKPYRCEECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQFHYKPDPKKARKPAPRAAAEGPQPVSAAPAPSADPGVFIMNSPVLTGQLDQSLLQPGLLGQAVLPASVSAGGDWTVSLTDGSLATLEGIQLQLAANLVGPNVQISGIDASTVNNITLQIDPSVLQQTLQQGNLLAQQLTAEPGLAPQGSSLQTPESTVPASVVIQPIPGLSLQPTVTSANLTIGPLSEQDSVLATSSSGTQDLSQVMTSQGLVSTSGGPHEITLTINNSSLSQVLAQAAGPAAATSSGPPQEITLTISEFFSDHVENNDRKIGQDLIQHSSNGSSELNGSIRLSAPTINNQSTGATLTISNDQLLSQSATLNSSGSRSARHSVRVRECGSVEDAGHKT
SIO_010081: ZNF236
subclass of: SO_0000673
so part of: ZNF236
location: complement(join(2139865..2139871,2140767..2140833,2144902..2145057,2147675..2147716,2148101..2148280,2148670..2148910,2149000..2149145,2150109..2150474,2151046..2151149,2152557..2152839,2154453..2154665,2155413..2155564,2158528..2158631,2160024..2160175,2160852..2160953,2161617..2161870,2163063..2163323,2164602..2164743,2167482..2167685,2168355..2168627,2174042..2174270,2175428..2175631,2177224..2177367,2179485..2179657,2179957..2180081,2180761..2180939,2185925..2186089,2187255..2187281))
location: region:2139865-2187281:-1
so has part: feature:2187255-2187281:-1:exon
so has part: feature:2185925-2186089:-1:exon
so has part: feature:2180761-2180939:-1:exon
so has part: feature:2179957-2180081:-1:exon
so has part: feature:2179485-2179657:-1:exon
so has part: feature:2177224-2177367:-1:exon
so has part: feature:2175428-2175631:-1:exon
so has part: feature:2174042-2174270:-1:exon
so has part: feature:2168355-2168627:-1:exon
so has part: feature:2167482-2167685:-1:exon
so has part: feature:2164602-2164743:-1:exon
so has part: feature:2163063-2163323:-1:exon
so has part: feature:2161617-2161870:-1:exon
so has part: feature:2160852-2160953:-1:exon
so has part: feature:2160024-2160175:-1:exon
so has part: feature:2158528-2158631:-1:exon
so has part: feature:2155413-2155564:-1:exon
so has part: feature:2154453-2154665:-1:exon
so has part: feature:2152557-2152839:-1:exon
so has part: feature:2151046-2151149:-1:exon
so has part: feature:2150109-2150474:-1:exon
so has part: feature:2149000-2149145:-1:exon
so has part: feature:2148670-2148910:-1:exon
so has part: feature:2148101-2148280:-1:exon
so has part: feature:2147675-2147716:-1:exon
so has part: feature:2144902-2145057:-1:exon
so has part: feature:2140767-2140833:-1:exon
so has part: feature:2139865-2139871:-1:exon

XP_019842336.1
type: Protein
SIO_000068: ncbiprotein

position:2139865:-1
position: 2139865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2187255-2187281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2185925-2186089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2180761-2180939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2179957-2180081:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2179485-2179657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2177224-2177367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2175428-2175631:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2174042-2174270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2168355-2168627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2167482-2167685:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2164602-2164743:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2163063-2163323:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2161617-2161870:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2160852-2160953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2160024-2160175:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2158528-2158631:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2155413-2155564:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2154453-2154665:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2152557-2152839:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2151046-2151149:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2150109-2150474:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2149000-2149145:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2148670-2148910:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2148101-2148280:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2147675-2147716:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2144902-2145057:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2140767-2140833:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2139865-2139871:-1:exon

LOC109577948
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2197317..2202315
location: region:2197317-2202315:1
so has part: feature:2197317-2202315:1:exon
subclass of: SO_0000011

109577948
type: Gene
SIO_000068: ncbigene

position:2197317:1
position: 2197317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2202315:1
position: 2202315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2197317-2202315:1:exon

LOC109577948
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109577948
product: uncharacterized LOC109577948, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XR_002183624.1
SIO_010081: LOC109577948
subclass of: SO_0000673
so part of: LOC109577948
location: join(2197317..2197731,2200195..2200301,2200803..2200856,2201854..2202315)
location: region:2197317-2202315:1
so has part: feature:2197317-2197731:1:exon
so has part: feature:2200195-2200301:1:exon
so has part: feature:2200803-2200856:1:exon
so has part: feature:2201854-2202315:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2197317-2197731:1:exon

position:2197731:1
position: 2197731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2200195-2200301:1:exon

position:2200195:1
position: 2200195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2200301:1
position: 2200301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2200803-2200856:1:exon

position:2200803:1
position: 2200803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2200856:1
position: 2200856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2201854-2202315:1:exon

position:2201854:1
position: 2201854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109577948
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109577948
product: uncharacterized LOC109577948, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XR_002183625.1
SIO_010081: LOC109577948
subclass of: SO_0000673
so part of: LOC109577948
location: join(2197343..2197458,2197569..2197731,2200195..2200301,2200803..2200856,2201854..2202315)
location: region:2197343-2202315:1
so has part: feature:2197343-2197458:1:exon
so has part: feature:2197569-2197731:1:exon
so has part: feature:2200195-2200301:1:exon
so has part: feature:2200803-2200856:1:exon
so has part: feature:2201854-2202315:1:exon

position:2197343:1
position: 2197343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2197343-2197458:1:exon

position:2197458:1
position: 2197458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2197569-2197731:1:exon

position:2197569:1
position: 2197569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2200195-2200301:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2200803-2200856:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2201854-2202315:1:exon

LOC109577948
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109577948
product: uncharacterized LOC109577948, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XR_002183626.1
SIO_010081: LOC109577948
subclass of: SO_0000673
so part of: LOC109577948
location: join(2197386..2197425,2197569..2197731,2200195..2200301,2200803..2200856,2201854..2202315)
location: region:2197386-2202315:1
so has part: feature:2197386-2197425:1:exon
so has part: feature:2197569-2197731:1:exon
so has part: feature:2200195-2200301:1:exon
so has part: feature:2200803-2200856:1:exon
so has part: feature:2201854-2202315:1:exon

position:2197386:1
position: 2197386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2197386-2197425:1:exon

position:2197425:1
position: 2197425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2197569-2197731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2200195-2200301:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2200803-2200856:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2201854-2202315:1:exon

ZNF516
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2382927..2482186
location: region:2382927-2482186:1
so has part: feature:2382927-2482186:1:exon
subclass of: SO_0000010

109577852
type: Gene
SIO_000068: ncbigene

position:2382927:1
position: 2382927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2482186:1
position: 2482186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2382927-2482186:1:exon

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF516
product: zinc finger protein 516, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_019986765.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2382927..2383041,2426458..2428358,2457739..2459103,2478128..2482186)
location: region:2382927-2482186:1
so has part: feature:2382927-2383041:1:exon
so has part: feature:2426458-2428358:1:exon
so has part: feature:2457739-2459103:1:exon
so has part: feature:2478128-2482186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2382927-2383041:1:exon

position:2383041:1
position: 2383041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2426458-2428358:1:exon

position:2426458:1
position: 2426458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2428358:1
position: 2428358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2457739-2459103:1:exon

position:2457739:1
position: 2457739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2459103:1
position: 2459103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2478128-2482186:1:exon

position:2478128:1
position: 2478128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF516
product: zinc finger protein 516, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_019986761.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2382928..2383041,2426458..2428358,2457739..2459103,2465700..2465804,2466532..2466599,2478128..2482186)
location: region:2382928-2482186:1
so has part: feature:2382928-2383041:1:exon
so has part: feature:2426458-2428358:1:exon
so has part: feature:2457739-2459103:1:exon
so has part: feature:2465700-2465804:1:exon
so has part: feature:2466532-2466599:1:exon
so has part: feature:2478128-2482186:1:exon

position:2382928:1
position: 2382928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2382928-2383041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2426458-2428358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2457739-2459103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2465700-2465804:1:exon

position:2465700:1
position: 2465700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2465804:1
position: 2465804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2466532-2466599:1:exon

position:2466532:1
position: 2466532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2466599:1
position: 2466599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2478128-2482186:1:exon

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF516
product: zinc finger protein 516, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_019986763.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2382928..2383041,2426458..2428358,2457739..2459103,2465700..2465804,2478128..2482186)
location: region:2382928-2482186:1
so has part: feature:2382928-2383041:1:exon
so has part: feature:2426458-2428358:1:exon
so has part: feature:2457739-2459103:1:exon
so has part: feature:2465700-2465804:1:exon
so has part: feature:2478128-2482186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2382928-2383041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2426458-2428358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2457739-2459103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2465700-2465804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2478128-2482186:1:exon

LOC109577853
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577853
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2384057..2385769)
location: region:2384057-2385769:-1
so has part: feature:2384057-2385769:-1:exon
subclass of: SO_0000011

109577853
type: Gene
SIO_000068: ncbigene

position:2384057:-1
position: 2384057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2385769:-1
position: 2385769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2384057-2385769:-1:exon

LOC109577853
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109577853
product: uncharacterized LOC109577853
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XR_002183606.1
SIO_010081: LOC109577853
subclass of: SO_0000673
so part of: LOC109577853
location: complement(join(2384057..2385043,2385251..2385769))
location: region:2384057-2385769:-1
so has part: feature:2385251-2385769:-1:exon
so has part: feature:2384057-2385043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2385251-2385769:-1:exon

position:2385251:-1
position: 2385251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2384057-2385043:-1:exon

position:2385043:-1
position: 2385043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF516
product: zinc finger protein 516, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019986762.1
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2396872..2397889,2426458..2428358,2457739..2459103,2465700..2465804,2466532..2466599,2478128..2482186)
location: region:2396872-2482186:1
so has part: feature:2396872-2397889:1:exon
so has part: feature:2426458-2428358:1:exon
so has part: feature:2457739-2459103:1:exon
so has part: feature:2465700-2465804:1:exon
so has part: feature:2466532-2466599:1:exon
so has part: feature:2478128-2482186:1:exon

position:2396872:1
position: 2396872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2396872-2397889:1:exon

position:2397889:1
position: 2397889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2426458-2428358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2457739-2459103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2465700-2465804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2466532-2466599:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2478128-2482186:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X1
translation: MERSREAEAELRGGRSPSRASRSPEADGDRALSHSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADTGKILLRSTRKEAEGVAAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHIAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSAPGPADSQQFFLQCLNLRPAAGTPTRGQTGRRVAELDPVNSYQVWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRAGAPGDPAPGPPDPRPAARPSRRAAVPAGHGKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRXPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEAPAHPTAGAKPHRCCFPEDVSLTVLSNGDQSHTLGNSPSGRAAGEPGAGIAACVSILESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPPRPAQAAGLQPPSESQAAYPRERPPDLHTKEHPTAGKRAPAPDXVPLDLSERSSRDDPGRREPASSLQAALAVHPCPYCGHKTYYPEVLWMHKRVWHRVSGQAVAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGAPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCTLWTAGPDGTRQTRPGPSPEQPPPKPKQEASPRPGATGXSGGFSRSATPTPTVITRAGPQAPASGRQGAGLGPPSKHSAPDPPKAKFSPQPQGQPHGKGDGATPLPPREPPSKAGSRGPAVPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGTLRTQAHQGDFICVECGKSFHQPSHLRAHMRAHTVLFESNGLRGADAHTTSADTPKQGRDHSNADAVQTVPLRKGT
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2426630..2428358,2457739..2459103,2465700..2465804,2466532..2466599,2478128..2478187)
location: region:2426630-2478187:1
so has part: feature:2426630-2428358:1:exon
so has part: feature:2457739-2459103:1:exon
so has part: feature:2465700-2465804:1:exon
so has part: feature:2466532-2466599:1:exon
so has part: feature:2478128-2478187:1:exon

XP_019842320.1
type: Protein
SIO_000068: ncbiprotein

position:2426630:1
position: 2426630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2478187:1
position: 2478187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2426630-2428358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2457739-2459103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2465700-2465804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2466532-2466599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2478128-2478187:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X1
translation: MERSREAEAELRGGRSPSRASRSPEADGDRALSHSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADTGKILLRSTRKEAEGVAAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHIAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSAPGPADSQQFFLQCLNLRPAAGTPTRGQTGRRVAELDPVNSYQVWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRAGAPGDPAPGPPDPRPAARPSRRAAVPAGHGKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRXPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEAPAHPTAGAKPHRCCFPEDVSLTVLSNGDQSHTLGNSPSGRAAGEPGAGIAACVSILESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPPRPAQAAGLQPPSESQAAYPRERPPDLHTKEHPTAGKRAPAPDXVPLDLSERSSRDDPGRREPASSLQAALAVHPCPYCGHKTYYPEVLWMHKRVWHRVSGQAVAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGAPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCTLWTAGPDGTRQTRPGPSPEQPPPKPKQEASPRPGATGXSGGFSRSATPTPTVITRAGPQAPASGRQGAGLGPPSKHSAPDPPKAKFSPQPQGQPHGKGDGATPLPPREPPSKAGSRGPAVPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGTLRTQAHQGDFICVECGKSFHQPSHLRAHMRAHTVLFESNGLRGADAHTTSADTPKQGRDHSNADAVQTVPLRKGT
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2426630..2428358,2457739..2459103,2465700..2465804,2466532..2466599,2478128..2478187)
location: region:2426630-2478187:1
so has part: feature:2426630-2428358:1:exon
so has part: feature:2457739-2459103:1:exon
so has part: feature:2465700-2465804:1:exon
so has part: feature:2466532-2466599:1:exon
so has part: feature:2478128-2478187:1:exon

XP_019842321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2426630-2428358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2457739-2459103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2465700-2465804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2466532-2466599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2478128-2478187:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X2
translation: MERSREAEAELRGGRSPSRASRSPEADGDRALSHSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADTGKILLRSTRKEAEGVAAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHIAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSAPGPADSQQFFLQCLNLRPAAGTPTRGQTGRRVAELDPVNSYQVWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRAGAPGDPAPGPPDPRPAARPSRRAAVPAGHGKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRXPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEAPAHPTAGAKPHRCCFPEDVSLTVLSNGDQSHTLGNSPSGRAAGEPGAGIAACVSILESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPPRPAQAAGLQPPSESQAAYPRERPPDLHTKEHPTAGKRAPAPDXVPLDLSERSSRDDPGRREPASSLQAALAVHPCPYCGHKTYYPEVLWMHKRVWHRVSGQAVAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGAPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCTLWTAGPDGTRQTRPGPSPEQPPPKPKQEASPRPGATGXSGGFSRSATPTPTVITRAGPQAPASGRQGAGLGPPSKHSAPDPPKAKFSPQPQGQPHGKGDGATPLPPREPPSKAGSRGPAVPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGTLRTQAHQGDFICVECGKSFHQPSHLRAHMRAHTGERPF
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2426630..2428358,2457739..2459103,2465700..2465804,2478128..2478144)
location: region:2426630-2478144:1
so has part: feature:2426630-2428358:1:exon
so has part: feature:2457739-2459103:1:exon
so has part: feature:2465700-2465804:1:exon
so has part: feature:2478128-2478144:1:exon

XP_019842322.1
type: Protein
SIO_000068: ncbiprotein

position:2478144:1
position: 2478144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2426630-2428358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2457739-2459103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2465700-2465804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2478128-2478144:1:exon

ZNF516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516 isoform X3
translation: MERSREAEAELRGGRSPSRASRSPEADGDRALSHSCCICGKTFPFQSSLSQHMRKHTGEKPYKCPYCDHRAAQKGNLKIHIRGHRAGTLTQGREPEAAETRVSEGLGGCTSPTKSTSACNRILNGATQADTGKILLRSTRKEAEGVAAGQCAFCKSRFERKKDLAQHVQQAHKPFTCRLCSYATLREEALLSHVEKDHIAAQGPRGDAFAENGKPELPPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPRSELEPVATINDVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRRVEAGQPRAAVGEGSAPGPADSQQFFLQCLNLRPAAGTPTRGQTGRRVAELDPVNSYQVWQLATRGKVAEPAEYLKYAAWDEALAGDVAFDKERREFILVSQEKRKREPEPGAQGPPRKRAGAPGDPAPGPPDPRPAARPSRRAAVPAGHGKSSECFECGKIFRTYHQMVLHSRVHRRARRDRERDGPGDRXPRARCGSLSEGDSASQPSSPGSGCAAADSPGSGLADEAADESGEEAPAHPTAGAKPHRCCFPEDVSLTVLSNGDQSHTLGNSPSGRAAGEPGAGIAACVSILESSSRDAPRRPEPPRCSVDLKTPACGPQQEGPGPRDAADLPPRPAQAAGLQPPSESQAAYPRERPPDLHTKEHPTAGKRAPAPDXVPLDLSERSSRDDPGRREPASSLQAALAVHPCPYCGHKTYYPEVLWMHKRVWHRVSGQAVAPQWTQPNGYKSIRSNLVFLARSGRTGPPPALGGKECQPLPIARFTRTQVPGGAPGPKGSPSPLGVPTKAAGLPRSKEGHPGAPCTLWTAGPDGTRQTRPGPSPEQPPPKPKQEASPRPGATGXSGGFSRSATPTPTVITRAGPQAPASGRQGAGLGPPSKHSAPDPPKAKFSPQPQGQPHGKGDGATPLPPREPPSKAGSRGPAVPQGPPAPHPVKQEPASEGPEKRLDLLSIFKTYIPKDLASLYQSWGASSPVLERRGERPF
SIO_010081: ZNF516
subclass of: SO_0000673
so part of: ZNF516
location: join(2426630..2428358,2457739..2459103,2478128..2478144)
location: region:2426630-2478144:1
so has part: feature:2426630-2428358:1:exon
so has part: feature:2457739-2459103:1:exon
so has part: feature:2478128-2478144:1:exon

XP_019842324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2426630-2428358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2457739-2459103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2478128-2478144:1:exon

LOC109578016
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2802428..2817542
location: region:2802428-2817542:1
so has part: feature:2802428-2817542:1:exon
subclass of: SO_0000011

109578016
type: Gene
SIO_000068: ncbigene

position:2802428:1
position: 2802428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2817542:1
position: 2817542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2802428-2817542:1:exon

LOC109578016
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109578016
product: uncharacterized LOC109578016, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002183644.1
SIO_010081: LOC109578016
subclass of: SO_0000673
so part of: LOC109578016
location: join(2802428..2802634,2803146..2803265,2808363..2808442,2817022..2817542)
location: region:2802428-2817542:1
so has part: feature:2802428-2802634:1:exon
so has part: feature:2803146-2803265:1:exon
so has part: feature:2808363-2808442:1:exon
so has part: feature:2817022-2817542:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2802428-2802634:1:exon

position:2802634:1
position: 2802634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2803146-2803265:1:exon

position:2803146:1
position: 2803146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2803265:1
position: 2803265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2808363-2808442:1:exon

position:2808363:1
position: 2808363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2808442:1
position: 2808442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2817022-2817542:1:exon

position:2817022:1
position: 2817022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109578016
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109578016
product: uncharacterized LOC109578016, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_002183643.1
SIO_010081: LOC109578016
subclass of: SO_0000673
so part of: LOC109578016
location: join(2802428..2802634,2803146..2803265,2817022..2817542)
location: region:2802428-2817542:1
so has part: feature:2802428-2802634:1:exon
so has part: feature:2803146-2803265:1:exon
so has part: feature:2817022-2817542:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2802428-2802634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2803146-2803265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2817022-2817542:1:exon

TSHZ1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TSHZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3258743..3270220)
location: region:3258743-3270220:-1
so has part: feature:3258743-3270220:-1:exon
subclass of: SO_0000010

109577631
type: Gene
SIO_000068: ncbigene

position:3258743:-1
position: 3258743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3270220:-1
position: 3270220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3258743-3270220:-1:exon

TSHZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TSHZ1
product: teashirt zinc finger homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 ESTs, 7 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986403.1
SIO_010081: TSHZ1
subclass of: SO_0000673
so part of: TSHZ1
location: complement(join(3258743..3263252,3263385..3263512,3267620..3267717,3270056..3270220))
location: region:3258743-3270220:-1
so has part: feature:3270056-3270220:-1:exon
so has part: feature:3267620-3267717:-1:exon
so has part: feature:3263385-3263512:-1:exon
so has part: feature:3258743-3263252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3270056-3270220:-1:exon

position:3270056:-1
position: 3270056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3267620-3267717:-1:exon

position:3267620:-1
position: 3267620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3267717:-1
position: 3267717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3263385-3263512:-1:exon

position:3263385:-1
position: 3263385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263512:-1
position: 3263512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3258743-3263252:-1:exon

position:3263252:-1
position: 3263252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSHZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TSHZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teashirt homolog 1
translation: MTKAKDSVPPATEALWSCSRHPGVQSADLHNPCPSAPGPNSQAKPIRFWILLRFLGMNPRRGLSSLVKEVTSEPRVEEERHPQAEKQSYDGQTDISKKRADXALPLKCVHLGGVWGLALVETCFHRGAAAAYVPEEELKAAVIDEGSVEEDGLPGDVQEADFACSEEAEIKEAQSYQNSPISTATNQDAGYGSPFSEHSXSDQPAHFKSSSSKEEKEERQGAEGVSYPQDSLAQIKAVYANLFSESCWSSLALDLKKSASTTSTSDAAQKEGSTPAPTPPTSTAGATGTTASTPSSGSGASGGSGYDWHQAALAKTLQQTSSYGLLPEPSLFSTVQLYRQNNKLYGSVFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNRDKDSEKTKRWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVPLKEPVPALTKLVPSTKKRALHELAAPGSPEPAGAAAAEAALSEAAKEQKTANPYVTPNNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTTSASKKGKQLVLDPVVEEKIQSIPLPPTTHTRLPAAATTAHVKKQPDSPAGPTIAEEKKEPEKDKAALVAGEVDKKIKEEGEDTGEKFEPTALYQYLREEDLDDSAKGGVDILKSLENTVSTAISKAQNGAPSWGGYPSIHAAYQLPGTVKPPPAVQSVQMQPSFAGGVKPLSAEHGALLHSPGSLTPPPHKSNVSAMEELVEKVTGKVSVKKEERPAEKEKGSPAKAXSPAAKENKDFPRADELGGSSKPQPKKGPEADGGKAKKEGTGDAHTPNGTEPLKAKVTNGCNNLAIITDHSPEPSFINPLSALQSIMNTHLGKVSRPVSPSLDPLAMLYKISTSMLDKPAYPAPPAKPPGAADRYFYENSDQPIDLTKSKSKPLVPGASDGVSSPLRESALMDISDMVKNLTGRLTPKSSTPSTVSEKSDADGSSFEEALDELSPVHKRKGRQSNWNPQHLLILQAQFASSLRETAEGKYIMSDLGPQERVHISKFTGLSMTTISHWLANVKYQLRRTGGTKFLKNLDTGHPVFFCNDCASQFRTASTYINHLETHLGFSLKDLSKLPLNQIQEQQNVSKVLASKALGPSGAAEDELGSTFQCKLCNRTFASKHAVKLHLSKTHGKSPEDHLIYVTELEKQ
SIO_010081: TSHZ1
subclass of: SO_0000673
so part of: TSHZ1
location: complement(join(3260059..3263252,3263385..3263512,3267620..3267717,3270056..3270220))
location: region:3260059-3270220:-1
so has part: feature:3270056-3270220:-1:exon
so has part: feature:3267620-3267717:-1:exon
so has part: feature:3263385-3263512:-1:exon
so has part: feature:3260059-3263252:-1:exon

XP_019841962.1
type: Protein
SIO_000068: ncbiprotein

position:3260059:-1
position: 3260059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3270056-3270220:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3267620-3267717:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3263385-3263512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3260059-3263252:-1:exon

ZADH2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ZADH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3340824..3352362
location: region:3340824-3352362:1
so has part: feature:3340824-3352362:1:exon
subclass of: SO_0000010

109577845
type: Gene
SIO_000068: ncbigene

position:3340824:1
position: 3340824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3352362:1
position: 3352362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3340824-3352362:1:exon

ZADH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZADH2
product: zinc binding alcohol dehydrogenase domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 64 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 209 samples with support for all annotated introns
transcript id: XM_019986745.1
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: join(3340824..3340927,3347437..3352362)
location: region:3340824-3352362:1
so has part: feature:3340824-3340927:1:exon
so has part: feature:3347437-3352362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3340824-3340927:1:exon

position:3340927:1
position: 3340927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3347437-3352362:1:exon

position:3347437:1
position: 3347437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZADH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZADH2
product: zinc binding alcohol dehydrogenase domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 63 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_019986744.1
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: join(3340969..3340986,3347437..3352362)
location: region:3340969-3352362:1
so has part: feature:3340969-3340986:1:exon
so has part: feature:3347437-3352362:1:exon

position:3340969:1
position: 3340969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3340969-3340986:1:exon

position:3340986:1
position: 3340986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3347437-3352362:1:exon

ZADH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZADH2
product: zinc binding alcohol dehydrogenase domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 63 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_019986743.1
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: join(3343632..3343900,3347437..3352362)
location: region:3343632-3352362:1
so has part: feature:3343632-3343900:1:exon
so has part: feature:3347437-3352362:1:exon

position:3343632:1
position: 3343632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3343632-3343900:1:exon

position:3343900:1
position: 3343900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3347437-3352362:1:exon

ZADH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZADH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin reductase 3
translation: MVGQAVAYMAPGSFAEYTVVPARVAIPVPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNTEHVGTVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIVIGFVSGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLPEFRGAMDHLLKMYAGGELVCEVDTGGLSAEGRFTGLESVFRAVDYMYMRKNTGKIVVELPPSVNSKL
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: 3347573..3348361
location: region:3347573-3348361:1
so has part: feature:3347573-3348361:1:exon

XP_019842302.1
type: Protein
SIO_000068: ncbiprotein

position:3347573:1
position: 3347573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3348361:1
position: 3348361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3347573-3348361:1:exon

ZADH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZADH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin reductase 3
translation: MVGQAVAYMAPGSFAEYTVVPARVAIPVPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNTEHVGTVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIVIGFVSGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLPEFRGAMDHLLKMYAGGELVCEVDTGGLSAEGRFTGLESVFRAVDYMYMRKNTGKIVVELPPSVNSKL
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: 3347573..3348361
location: region:3347573-3348361:1
so has part: feature:3347573-3348361:1:exon

XP_019842303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3347573-3348361:1:exon

ZADH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZADH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin reductase 3
translation: MVGQAVAYMAPGSFAEYTVVPARVAIPVPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNTEHVGTVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIVIGFVSGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLPEFRGAMDHLLKMYAGGELVCEVDTGGLSAEGRFTGLESVFRAVDYMYMRKNTGKIVVELPPSVNSKL
SIO_010081: ZADH2
subclass of: SO_0000673
so part of: ZADH2
location: 3347573..3348361
location: region:3347573-3348361:1
so has part: feature:3347573-3348361:1:exon

XP_019842304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3347573-3348361:1:exon

ZNF407
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ZNF407
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3468397..3841091)
location: region:3468397-3841091:-1
so has part: feature:3468397-3841091:-1:exon
subclass of: SO_0000010

109577632
type: Gene
SIO_000068: ncbigene

position:3468397:-1
position: 3468397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3841091:-1
position: 3841091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3468397-3841091:-1:exon

ZNF407
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF407
product: zinc finger protein 407
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986404.1
SIO_010081: ZNF407
subclass of: SO_0000673
so part of: ZNF407
location: complement(join(3468397..3469791,3591985..3592163,3616543..3616663,3637424..3637507,3641406..3641572,3719371..3719445,3830749..3830863,3836289..3840001,3840293..3841091))
location: region:3468397-3841091:-1
so has part: feature:3840293-3841091:-1:exon
so has part: feature:3836289-3840001:-1:exon
so has part: feature:3830749-3830863:-1:exon
so has part: feature:3719371-3719445:-1:exon
so has part: feature:3641406-3641572:-1:exon
so has part: feature:3637424-3637507:-1:exon
so has part: feature:3616543-3616663:-1:exon
so has part: feature:3591985-3592163:-1:exon
so has part: feature:3468397-3469791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3840293-3841091:-1:exon

position:3840293:-1
position: 3840293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3836289-3840001:-1:exon

position:3836289:-1
position: 3836289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3840001:-1
position: 3840001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3830749-3830863:-1:exon

position:3830749:-1
position: 3830749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3830863:-1
position: 3830863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3719371-3719445:-1:exon

position:3719371:-1
position: 3719371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3719445:-1
position: 3719445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3641406-3641572:-1:exon

position:3641406:-1
position: 3641406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3641572:-1
position: 3641572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3637424-3637507:-1:exon

position:3637424:-1
position: 3637424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3637507:-1
position: 3637507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3616543-3616663:-1:exon

position:3616543:-1
position: 3616543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3616663:-1
position: 3616663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3591985-3592163:-1:exon

position:3591985:-1
position: 3591985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3592163:-1
position: 3592163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3468397-3469791:-1:exon

position:3469791:-1
position: 3469791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF407
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF407
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 407
translation: MMDPXKKLGSDEGDHVNEEAEHPSHSASHGVDRGPVSDETADSAENSTNKRGFAESSDLDHIVEEDNGNKRASKRMKLAEAEPLGPGEPRTHGSGSPEGTGSGEGVALPGSEVEPLSSGRDGSPGLPGHPSPGEMAAEKEPAQETTAFLDLGGEPPSPPKEMRGSGALGGPCACSPVSCPHVEKHAGSQNGDSKACGALERAHQRFQRKLSKQSGHGSELRVEMRPSRNTSPEKMEVVEENVTSHDAAGNPENQSRKLGMAVTSERLLDRLESSRNTAQAAPGLSTASRPRAERGFLVLGSGFRRRAGAFALKGQVKKRCGLLGVSKRGANEVQRLYSKHLRAPIKMSDAESAPLHGDPRLXPPETQAPKQDRTNAHLPGSSDSLARRPAPDHQVACTCSACGHTATSRAELEIHVTRCHVGELRFHCQTCGFSSTSRRDVEEHAHSHQHQQTASGLRCQCCLFTSPNEVDLRDHMKEKHSMGFLCPPCHLFFSSEKDMEEHRATEKHIHLLGQTKSSQSFNGDSXLQTFPLSTLESENAKVSVSEAGKSAQEEPAKSRVSHGNEARHSSKPQFQCKKCFYKTRSSTVLTRHIKLRHGQDYHFLCKACNLYSLSKEGMEKHIKRSKHLENAKKNNIGLSFEECIERVCIGANDKKEELTVPGNGRTEGHGEGVQIQEQSCLDQSILXPQELSLSGVITKEGELAPPPTPKRGRPKGNISRTCSHCGLLASSITNLTVHIRRKHSHQYSYLCKVCKYYTVTKGDMERHCATKKHKGRVEIEASGKQSSDIVVGPEGGNLDASRKNTSVADEPANPPVEADTSVSEQXPLEQGSPVEVEVENVFHPEIGRLAVTLLRKEQTSVDPEDLQVTHAPRDDASTDENRCTHCEFKAHSSTSLELHVKRKHTREFAFYCMACDYYAVTRREMTRHAATEKHKMKRQSYLNSTNVQASSSEVSKTIIIPQGQQQQNSEEFQIISDQPSETLKSRNAADCSILDENTSLDMSKVFCASDSVETETEEDSNLSEDHSFCETFQQPLAKDKVIKPEEMVPLSISSNCGSPSKFQNENSGSSALNHETAKKRHSMLNDISSPNTHGESDGGNAEDKADKVLGKRGCLRAVDGEHPAKSAMLTAPRDLLNLGSSDQDRAGSMQSSGDLKDVPGDPVLESKEILMNSRHETKVILEEDGPASDSTIDNNDVYETIISIDDKGQAVYSFGRFDSSIIRIKNPEDGELFDQSQEGLVAAGVRMSELPLKDCAQGVKKKKADSSSFAESTRIRCDDCGFLADGLSGLNVHIAMKHPTKEKHFHCLLCGKSFYTESNLHQHLASAGHMRNEQASVEELPEGGXTFKCVKCTEPFDSEQNLFLHIKGQHEELLREVNKYIVEDTEQINREREENQGNVCKYCGKMCRSSNSMAFLAHIRTHTGSKPFKCKICHFATAQLGDARNHVKRHLGMREYKCHVCGVAFVMKKHLNTHLLGKHGVGTPKERKFTCHLCDRSFTEKWALNNHMKLHTGEKPFKCTWPTCHYSFLTASAMKDHYRTHTGEKSFLCDLCGFAGGTRHALTKHRRQHTGEKPFKCDECNFASTTQSHLTRHKRVHTGEKPYRCPWCDYRSNCAENIRKHILHTGKHEGVKMYNCPKCDYGTNIPVEFRNHLKEQHPDIENPDLAYLHAGIVSKSYECRLKGQGATFVETDSPFTAAALAEESPVKDRPLRSSRRPAAPPEPVQQVIIIQGYEGEFALDASVEETAAATLQTLALAGQVARVVHITEDGQVIAAGQSGAQGGSGAPSPGLPEPLADGATQVVVVGGSMEGHGMDEPLSPSGAVIQQVTKQEILGLAEAGVPPPDAASALDALLCAVTELGGAEGPAAAEEKGRAGPRDVLVQLPGQEAATPAAPEIHVFHDGPDGAAATEPVEVLTQLVRPAAVIASQERAQVAFKKVVQGMLQFAVCDSAAAGQLMKDGVTQVIVNEEGTVHMLAREGSQIIMQEAEARGPHVDLAEA…
SIO_010081: ZNF407
subclass of: SO_0000673
so part of: ZNF407
location: complement(join(3468488..3469791,3591985..3592163,3616543..3616663,3637424..3637507,3641406..3641572,3719371..3719445,3830749..3830863,3836289..3840001,3840293..3840850))
location: region:3468488-3840850:-1
so has part: feature:3840293-3840850:-1:exon
so has part: feature:3836289-3840001:-1:exon
so has part: feature:3830749-3830863:-1:exon
so has part: feature:3719371-3719445:-1:exon
so has part: feature:3641406-3641572:-1:exon
so has part: feature:3637424-3637507:-1:exon
so has part: feature:3616543-3616663:-1:exon
so has part: feature:3591985-3592163:-1:exon
so has part: feature:3468488-3469791:-1:exon

XP_019841963.1
type: Protein
SIO_000068: ncbiprotein

position:3468488:-1
position: 3468488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3840850:-1
position: 3840850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3840293-3840850:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3836289-3840001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3830749-3830863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3719371-3719445:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3641406-3641572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3637424-3637507:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3616543-3616663:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3591985-3592163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3468488-3469791:-1:exon

CNDP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CNDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3874284..3901786)
location: region:3874284-3901786:-1
so has part: feature:3874284-3901786:-1:exon
subclass of: SO_0000010

109578014
type: Gene
SIO_000068: ncbigene

position:3874284:-1
position: 3874284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3901786:-1
position: 3901786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3874284-3901786:-1:exon

CNDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CNDP1
product: carnosine dipeptidase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019987014.1
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(3874284..3875599,3875784..3875931,3882520..3882661,3884632..3884796,3886038..3886198,3890335..3890419,3891617..3891817,3893931..3894019,3894666..3894828,3895996..3896145,3897610..3897735,3901602..3901786))
location: region:3874284-3901786:-1
so has part: feature:3901602-3901786:-1:exon
so has part: feature:3897610-3897735:-1:exon
so has part: feature:3895996-3896145:-1:exon
so has part: feature:3894666-3894828:-1:exon
so has part: feature:3893931-3894019:-1:exon
so has part: feature:3891617-3891817:-1:exon
so has part: feature:3890335-3890419:-1:exon
so has part: feature:3886038-3886198:-1:exon
so has part: feature:3884632-3884796:-1:exon
so has part: feature:3882520-3882661:-1:exon
so has part: feature:3875784-3875931:-1:exon
so has part: feature:3874284-3875599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3901602-3901786:-1:exon

position:3901602:-1
position: 3901602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3897610-3897735:-1:exon

position:3897610:-1
position: 3897610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3897735:-1
position: 3897735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3895996-3896145:-1:exon

position:3895996:-1
position: 3895996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3896145:-1
position: 3896145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3894666-3894828:-1:exon

position:3894666:-1
position: 3894666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3894828:-1
position: 3894828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3893931-3894019:-1:exon

position:3893931:-1
position: 3893931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3894019:-1
position: 3894019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3891617-3891817:-1:exon

position:3891617:-1
position: 3891617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3891817:-1
position: 3891817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3890335-3890419:-1:exon

position:3890335:-1
position: 3890335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3890419:-1
position: 3890419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3886038-3886198:-1:exon

position:3886038:-1
position: 3886038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3886198:-1
position: 3886198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3884632-3884796:-1:exon

position:3884632:-1
position: 3884632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3884796:-1
position: 3884796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3882520-3882661:-1:exon

position:3882520:-1
position: 3882520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3882661:-1
position: 3882661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3875784-3875931:-1:exon

position:3875784:-1
position: 3875784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3875931:-1
position: 3875931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3874284-3875599:-1:exon

position:3875599:-1
position: 3875599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CNDP1
product: carnosine dipeptidase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019987013.1
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(3874284..3875400,3875528..3875599,3875784..3875931,3882520..3882661,3884632..3884796,3886038..3886198,3890335..3890419,3891617..3891817,3893931..3894019,3894666..3894828,3895996..3896145,3897610..3897848))
location: region:3874284-3897848:-1
so has part: feature:3897610-3897848:-1:exon
so has part: feature:3895996-3896145:-1:exon
so has part: feature:3894666-3894828:-1:exon
so has part: feature:3893931-3894019:-1:exon
so has part: feature:3891617-3891817:-1:exon
so has part: feature:3890335-3890419:-1:exon
so has part: feature:3886038-3886198:-1:exon
so has part: feature:3884632-3884796:-1:exon
so has part: feature:3882520-3882661:-1:exon
so has part: feature:3875784-3875931:-1:exon
so has part: feature:3875528-3875599:-1:exon
so has part: feature:3874284-3875400:-1:exon

position:3897848:-1
position: 3897848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3897610-3897848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3895996-3896145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3894666-3894828:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3893931-3894019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891617-3891817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3890335-3890419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3886038-3886198:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3884632-3884796:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3882520-3882661:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3875784-3875931:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3875528-3875599:-1:exon

position:3875528:-1
position: 3875528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3874284-3875400:-1:exon

position:3875400:-1
position: 3875400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CNDP1
product: carnosine dipeptidase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019987012.1
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(3874284..3875599,3875784..3875931,3882520..3882661,3884632..3884796,3886038..3886198,3890335..3890419,3891617..3891817,3893931..3894019,3894666..3894828,3895996..3896145,3897610..3897848))
location: region:3874284-3897848:-1
so has part: feature:3897610-3897848:-1:exon
so has part: feature:3895996-3896145:-1:exon
so has part: feature:3894666-3894828:-1:exon
so has part: feature:3893931-3894019:-1:exon
so has part: feature:3891617-3891817:-1:exon
so has part: feature:3890335-3890419:-1:exon
so has part: feature:3886038-3886198:-1:exon
so has part: feature:3884632-3884796:-1:exon
so has part: feature:3882520-3882661:-1:exon
so has part: feature:3875784-3875931:-1:exon
so has part: feature:3874284-3875599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3897610-3897848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3895996-3896145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3894666-3894828:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3893931-3894019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891617-3891817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3890335-3890419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3886038-3886198:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3884632-3884796:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3882520-3882661:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3875784-3875931:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3874284-3875599:-1:exon

CNDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CNDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-Ala-His dipeptidase isoform X2
translation: MAPAVAHSQAESLLAFRLLLVGGMFSASTPPPGPLEKVFQYIDLHQDEFVQTLKEWVAVESDSVQPVPRLRRELLRMAGLAADRLRGLGARVASVDAGFQQLSDGQTLPIPPILLAELGSDPKKPTVCFYGHLDVQPARQEDGWLTDPYTLTEVDGKLYGRGTTDNKGPVLAWINAVSAFKALDEDLPVNIKFLIEGMEESGSLALEELVRKEKSGFFSSVDCIVISDNLWISRRKPALIYGTRGNSYFTVEVKCRDQDFHSGTFGGILNEPMADLVALLGSLVDASGRILVPGIYGHVAPVTEEEKRVYEAIDLDXEEYRNSSQVKKFLFDTKEELLMHLWRYPSLSIHGIEGAFHEPGAKTVIPGRVIGKFSIRLVPHMDMSVVETQVKQHLEYIFSKRNSSNQMTVSMALGLHPWIANISDHQYLAAKRAIKTVFGTEPDMIRDGSTIPIAKILQDTTQKSVIMLPLGAVDDGEHSQNEKINRWNYIEGSKLFAAFFLEMAKLHSS
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(3875400,3875528..3875599,3875784..3875931,3882520..3882661,3884632..3884796,3886038..3886198,3890335..3890419,3891617..3891817,3893931..3894019,3894666..3894828,3895996..3896145,3897610..3897762))
location: region:3875400-3897762:-1
so has part: feature:3897610-3897762:-1:exon
so has part: feature:3895996-3896145:-1:exon
so has part: feature:3894666-3894828:-1:exon
so has part: feature:3893931-3894019:-1:exon
so has part: feature:3891617-3891817:-1:exon
so has part: feature:3890335-3890419:-1:exon
so has part: feature:3886038-3886198:-1:exon
so has part: feature:3884632-3884796:-1:exon
so has part: feature:3882520-3882661:-1:exon
so has part: feature:3875784-3875931:-1:exon
so has part: feature:3875528-3875599:-1:exon
so has part: feature:3875400-3875400:-1:exon

XP_019842572.1
type: Protein
SIO_000068: ncbiprotein

position:3897762:-1
position: 3897762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3897610-3897762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3895996-3896145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3894666-3894828:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3893931-3894019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891617-3891817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3890335-3890419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3886038-3886198:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3884632-3884796:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3882520-3882661:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3875784-3875931:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3875528-3875599:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3875400-3875400:-1:exon

CNDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CNDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-Ala-His dipeptidase isoform X1
translation: MAPAVAHSQAESLLAFRLLLVGGMFSASTPPPGPLEKVFQYIDLHQDEFVQTLKEWVAVESDSVQPVPRLRRELLRMAGLAADRLRGLGARVASVDAGFQQLSDGQTLPIPPILLAELGSDPKKPTVCFYGHLDVQPARQEDGWLTDPYTLTEVDGKLYGRGTTDNKGPVLAWINAVSAFKALDEDLPVNIKFLIEGMEESGSLALEELVRKEKSGFFSSVDCIVISDNLWISRRKPALIYGTRGNSYFTVEVKCRDQDFHSGTFGGILNEPMADLVALLGSLVDASGRILVPGIYGHVAPVTEEEKRVYEAIDLDXEEYRNSSQVKKFLFDTKEELLMHLWRYPSLSIHGIEGAFHEPGAKTVIPGRVIGKFSIRLVPHMDMSVVETQVKQHLEYIFSKRNSSNQMTVSMALGLHPWIANISDHQYLAAKRAIKTVFGTEPDMIRDGSTIPIAKILQDTTQKSVIMLPLGAVDDGEHSQNEKINRWNYIEGSKLFAAFFLEMAKLHSSW
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(3875524..3875599,3875784..3875931,3882520..3882661,3884632..3884796,3886038..3886198,3890335..3890419,3891617..3891817,3893931..3894019,3894666..3894828,3895996..3896145,3897610..3897762))
location: region:3875524-3897762:-1
so has part: feature:3897610-3897762:-1:exon
so has part: feature:3895996-3896145:-1:exon
so has part: feature:3894666-3894828:-1:exon
so has part: feature:3893931-3894019:-1:exon
so has part: feature:3891617-3891817:-1:exon
so has part: feature:3890335-3890419:-1:exon
so has part: feature:3886038-3886198:-1:exon
so has part: feature:3884632-3884796:-1:exon
so has part: feature:3882520-3882661:-1:exon
so has part: feature:3875784-3875931:-1:exon
so has part: feature:3875524-3875599:-1:exon

XP_019842571.1
type: Protein
SIO_000068: ncbiprotein

position:3875524:-1
position: 3875524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3897610-3897762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3895996-3896145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3894666-3894828:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3893931-3894019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891617-3891817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3890335-3890419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3886038-3886198:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3884632-3884796:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3882520-3882661:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3875784-3875931:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3875524-3875599:-1:exon

CNDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CNDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-Ala-His dipeptidase isoform X3
translation: MFSASTPPPGPLEKVFQYIDLHQDEFVQTLKEWVAVESDSVQPVPRLRRELLRMAGLAADRLRGLGARVASVDAGFQQLSDGQTLPIPPILLAELGSDPKKPTVCFYGHLDVQPARQEDGWLTDPYTLTEVDGKLYGRGTTDNKGPVLAWINAVSAFKALDEDLPVNIKFLIEGMEESGSLALEELVRKEKSGFFSSVDCIVISDNLWISRRKPALIYGTRGNSYFTVEVKCRDQDFHSGTFGGILNEPMADLVALLGSLVDASGRILVPGIYGHVAPVTEEEKRVYEAIDLDXEEYRNSSQVKKFLFDTKEELLMHLWRYPSLSIHGIEGAFHEPGAKTVIPGRVIGKFSIRLVPHMDMSVVETQVKQHLEYIFSKRNSSNQMTVSMALGLHPWIANISDHQYLAAKRAIKTVFGTEPDMIRDGSTIPIAKILQDTTQKSVIMLPLGAVDDGEHSQNEKINRWNYIEGSKLFAAFFLEMAKLHSSW
SIO_010081: CNDP1
subclass of: SO_0000673
so part of: CNDP1
location: complement(join(3875524..3875599,3875784..3875931,3882520..3882661,3884632..3884796,3886038..3886198,3890335..3890419,3891617..3891817,3893931..3894019,3894666..3894828,3895996..3896145,3897610..3897693))
location: region:3875524-3897693:-1
so has part: feature:3897610-3897693:-1:exon
so has part: feature:3895996-3896145:-1:exon
so has part: feature:3894666-3894828:-1:exon
so has part: feature:3893931-3894019:-1:exon
so has part: feature:3891617-3891817:-1:exon
so has part: feature:3890335-3890419:-1:exon
so has part: feature:3886038-3886198:-1:exon
so has part: feature:3884632-3884796:-1:exon
so has part: feature:3882520-3882661:-1:exon
so has part: feature:3875784-3875931:-1:exon
so has part: feature:3875524-3875599:-1:exon

XP_019842573.1
type: Protein
SIO_000068: ncbiprotein

position:3897693:-1
position: 3897693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3897610-3897693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3895996-3896145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3894666-3894828:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3893931-3894019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891617-3891817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3890335-3890419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3886038-3886198:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3884632-3884796:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3882520-3882661:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3875784-3875931:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3875524-3875599:-1:exon

CNDP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CNDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3910190..3924059)
location: region:3910190-3924059:-1
so has part: feature:3910190-3924059:-1:exon
subclass of: SO_0000010

109577882
type: Gene
SIO_000068: ncbigene

position:3910190:-1
position: 3910190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3924059:-1
position: 3924059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3910190-3924059:-1:exon

CNDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CNDP2
product: CNDP dipeptidase 2 (metallopeptidase M20 family), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 220 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_019986826.1
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(3910190..3910734,3911097..3911244,3911419..3911560,3912824..3912988,3913737..3913897,3914573..3914657,3914856..3915056,3916443..3916531,3917275..3917437,3919595..3919738,3920827..3920907,3924046..3924059))
location: region:3910190-3924059:-1
so has part: feature:3924046-3924059:-1:exon
so has part: feature:3920827-3920907:-1:exon
so has part: feature:3919595-3919738:-1:exon
so has part: feature:3917275-3917437:-1:exon
so has part: feature:3916443-3916531:-1:exon
so has part: feature:3914856-3915056:-1:exon
so has part: feature:3914573-3914657:-1:exon
so has part: feature:3913737-3913897:-1:exon
so has part: feature:3912824-3912988:-1:exon
so has part: feature:3911419-3911560:-1:exon
so has part: feature:3911097-3911244:-1:exon
so has part: feature:3910190-3910734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3924046-3924059:-1:exon

position:3924046:-1
position: 3924046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3920827-3920907:-1:exon

position:3920827:-1
position: 3920827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3920907:-1
position: 3920907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3919595-3919738:-1:exon

position:3919595:-1
position: 3919595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3919738:-1
position: 3919738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3917275-3917437:-1:exon

position:3917275:-1
position: 3917275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3917437:-1
position: 3917437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3916443-3916531:-1:exon

position:3916443:-1
position: 3916443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3916531:-1
position: 3916531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3914856-3915056:-1:exon

position:3914856:-1
position: 3914856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3915056:-1
position: 3915056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3914573-3914657:-1:exon

position:3914573:-1
position: 3914573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3914657:-1
position: 3914657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3913737-3913897:-1:exon

position:3913737:-1
position: 3913737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3913897:-1
position: 3913897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3912824-3912988:-1:exon

position:3912824:-1
position: 3912824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3912988:-1
position: 3912988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3911419-3911560:-1:exon

position:3911419:-1
position: 3911419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3911560:-1
position: 3911560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3911097-3911244:-1:exon

position:3911097:-1
position: 3911097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3911244:-1
position: 3911244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3910190-3910734:-1:exon

position:3910734:-1
position: 3910734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CNDP2
product: CNDP dipeptidase 2 (metallopeptidase M20 family), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 209 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_019986824.1
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(3910190..3910734,3911097..3911244,3911419..3911560,3912824..3912988,3913737..3913897,3914573..3914657,3914856..3915056,3916443..3916531,3917275..3917437,3919595..3919738,3920827..3920907,3923730..3924037))
location: region:3910190-3924037:-1
so has part: feature:3923730-3924037:-1:exon
so has part: feature:3920827-3920907:-1:exon
so has part: feature:3919595-3919738:-1:exon
so has part: feature:3917275-3917437:-1:exon
so has part: feature:3916443-3916531:-1:exon
so has part: feature:3914856-3915056:-1:exon
so has part: feature:3914573-3914657:-1:exon
so has part: feature:3913737-3913897:-1:exon
so has part: feature:3912824-3912988:-1:exon
so has part: feature:3911419-3911560:-1:exon
so has part: feature:3911097-3911244:-1:exon
so has part: feature:3910190-3910734:-1:exon

position:3924037:-1
position: 3924037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3923730-3924037:-1:exon

position:3923730:-1
position: 3923730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3920827-3920907:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3919595-3919738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3917275-3917437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3916443-3916531:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3914856-3915056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3914573-3914657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3913737-3913897:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912824-3912988:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3911419-3911560:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3911097-3911244:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3910190-3910734:-1:exon

CNDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CNDP2
product: CNDP dipeptidase 2 (metallopeptidase M20 family), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 258 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 232 samples with support for all annotated introns
transcript id: XM_019986823.1
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(3910190..3910734,3911097..3911244,3911419..3911560,3912824..3912988,3913737..3913897,3914573..3914657,3914856..3915056,3916443..3916531,3917275..3917437,3919595..3919738,3920827..3922937))
location: region:3910190-3922937:-1
so has part: feature:3920827-3922937:-1:exon
so has part: feature:3919595-3919738:-1:exon
so has part: feature:3917275-3917437:-1:exon
so has part: feature:3916443-3916531:-1:exon
so has part: feature:3914856-3915056:-1:exon
so has part: feature:3914573-3914657:-1:exon
so has part: feature:3913737-3913897:-1:exon
so has part: feature:3912824-3912988:-1:exon
so has part: feature:3911419-3911560:-1:exon
so has part: feature:3911097-3911244:-1:exon
so has part: feature:3910190-3910734:-1:exon

position:3922937:-1
position: 3922937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3920827-3922937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3919595-3919738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3917275-3917437:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3916443-3916531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3914856-3915056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3914573-3914657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3913737-3913897:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3912824-3912988:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3911419-3911560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3911097-3911244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910190-3910734:-1:exon

CNDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CNDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSALTTLFKYVDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADIKQLGGSVZLVDIGTQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDGKLFGRGATDDKGPVAGWINALEANQKTKQEVPVNVRFCLEGMEESGSEGLDALIFAQKDAFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLIMLMGCLMDKKGKILIPGISEAVAPVTEEELELYDKIDFDLEEYARDVGAGTLLHGCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVSEQVTSYLTKKFAELHSPNKFKVYMGHGGKPWVSDFNHPHYLAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRRNYIEGTKMLAAYLYEVSQLKD
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(3910665..3910734,3911097..3911244,3911419..3911560,3912824..3912988,3913737..3913897,3914573..3914657,3914856..3915056,3916443..3916531,3917275..3917437,3919595..3919738,3920827..3920886))
location: region:3910665-3920886:-1
so has part: feature:3920827-3920886:-1:exon
so has part: feature:3919595-3919738:-1:exon
so has part: feature:3917275-3917437:-1:exon
so has part: feature:3916443-3916531:-1:exon
so has part: feature:3914856-3915056:-1:exon
so has part: feature:3914573-3914657:-1:exon
so has part: feature:3913737-3913897:-1:exon
so has part: feature:3912824-3912988:-1:exon
so has part: feature:3911419-3911560:-1:exon
so has part: feature:3911097-3911244:-1:exon
so has part: feature:3910665-3910734:-1:exon

XP_019842382.1
type: Protein
SIO_000068: ncbiprotein

position:3910665:-1
position: 3910665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3920886:-1
position: 3920886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3920827-3920886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3919595-3919738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3917275-3917437:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3916443-3916531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3914856-3915056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3914573-3914657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3913737-3913897:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3912824-3912988:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3911419-3911560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3911097-3911244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910665-3910734:-1:exon

CNDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CNDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSALTTLFKYVDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADIKQLGGSVZLVDIGTQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDGKLFGRGATDDKGPVAGWINALEANQKTKQEVPVNVRFCLEGMEESGSEGLDALIFAQKDAFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLIMLMGCLMDKKGKILIPGISEAVAPVTEEELELYDKIDFDLEEYARDVGAGTLLHGCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVSEQVTSYLTKKFAELHSPNKFKVYMGHGGKPWVSDFNHPHYLAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRRNYIEGTKMLAAYLYEVSQLKD
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(3910665..3910734,3911097..3911244,3911419..3911560,3912824..3912988,3913737..3913897,3914573..3914657,3914856..3915056,3916443..3916531,3917275..3917437,3919595..3919738,3920827..3920886))
location: region:3910665-3920886:-1
so has part: feature:3920827-3920886:-1:exon
so has part: feature:3919595-3919738:-1:exon
so has part: feature:3917275-3917437:-1:exon
so has part: feature:3916443-3916531:-1:exon
so has part: feature:3914856-3915056:-1:exon
so has part: feature:3914573-3914657:-1:exon
so has part: feature:3913737-3913897:-1:exon
so has part: feature:3912824-3912988:-1:exon
so has part: feature:3911419-3911560:-1:exon
so has part: feature:3911097-3911244:-1:exon
so has part: feature:3910665-3910734:-1:exon

XP_019842383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3920827-3920886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3919595-3919738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3917275-3917437:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3916443-3916531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3914856-3915056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3914573-3914657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3913737-3913897:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3912824-3912988:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3911419-3911560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3911097-3911244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910665-3910734:-1:exon

CNDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CNDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSALTTLFKYVDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADIKQLGGSVZLVDIGTQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDGKLFGRGATDDKGPVAGWINALEANQKTKQEVPVNVRFCLEGMEESGSEGLDALIFAQKDAFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLIMLMGCLMDKKGKILIPGISEAVAPVTEEELELYDKIDFDLEEYARDVGAGTLLHGCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVSEQVTSYLTKKFAELHSPNKFKVYMGHGGKPWVSDFNHPHYLAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRRNYIEGTKMLAAYLYEVSQLKD
SIO_010081: CNDP2
subclass of: SO_0000673
so part of: CNDP2
location: complement(join(3910665..3910734,3911097..3911244,3911419..3911560,3912824..3912988,3913737..3913897,3914573..3914657,3914856..3915056,3916443..3916531,3917275..3917437,3919595..3919738,3920827..3920886))
location: region:3910665-3920886:-1
so has part: feature:3920827-3920886:-1:exon
so has part: feature:3919595-3919738:-1:exon
so has part: feature:3917275-3917437:-1:exon
so has part: feature:3916443-3916531:-1:exon
so has part: feature:3914856-3915056:-1:exon
so has part: feature:3914573-3914657:-1:exon
so has part: feature:3913737-3913897:-1:exon
so has part: feature:3912824-3912988:-1:exon
so has part: feature:3911419-3911560:-1:exon
so has part: feature:3911097-3911244:-1:exon
so has part: feature:3910665-3910734:-1:exon

XP_019842385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3920827-3920886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3919595-3919738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3917275-3917437:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3916443-3916531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3914856-3915056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3914573-3914657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3913737-3913897:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3912824-3912988:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3911419-3911560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3911097-3911244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910665-3910734:-1:exon

LOC109577950
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577950
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3930717..3955017)
location: region:3930717-3955017:-1
so has part: feature:3930717-3955017:-1:exon
subclass of: SO_0000011

109577950
type: Gene
SIO_000068: ncbigene

position:3930717:-1
position: 3930717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3955017:-1
position: 3955017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3930717-3955017:-1:exon

LOC109577950
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109577950
product: uncharacterized LOC109577950
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002183627.1
SIO_010081: LOC109577950
subclass of: SO_0000673
so part of: LOC109577950
location: complement(join(3930717..3931608,3932699..3932884,3933534..3933579,3949091..3949149,3951506..3951560,3954672..3955017))
location: region:3930717-3955017:-1
so has part: feature:3954672-3955017:-1:exon
so has part: feature:3951506-3951560:-1:exon
so has part: feature:3949091-3949149:-1:exon
so has part: feature:3933534-3933579:-1:exon
so has part: feature:3932699-3932884:-1:exon
so has part: feature:3930717-3931608:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3954672-3955017:-1:exon

position:3954672:-1
position: 3954672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3951506-3951560:-1:exon

position:3951506:-1
position: 3951506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3951560:-1
position: 3951560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3949091-3949149:-1:exon

position:3949091:-1
position: 3949091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3949149:-1
position: 3949149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3933534-3933579:-1:exon

position:3933534:-1
position: 3933534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3933579:-1
position: 3933579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3932699-3932884:-1:exon

position:3932699:-1
position: 3932699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3932884:-1
position: 3932884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3930717-3931608:-1:exon

position:3931608:-1
position: 3931608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM69C
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: FAM69C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3950016..3968161
location: region:3950016-3968161:1
so has part: feature:3950016-3968161:1:exon
subclass of: SO_0000010

109577949
type: Gene
SIO_000068: ncbigene

position:3950016:1
position: 3950016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3968161:1
position: 3968161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3950016-3968161:1:exon

FAM69C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FAM69C
product: family with sequence similarity 69 member C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_019986943.1
SIO_010081: FAM69C
subclass of: SO_0000673
so part of: FAM69C
location: join(3950016..3950446,3959944..3960615,3963818..3963982,3967513..3968161)
location: region:3950016-3968161:1
so has part: feature:3950016-3950446:1:exon
so has part: feature:3959944-3960615:1:exon
so has part: feature:3963818-3963982:1:exon
so has part: feature:3967513-3968161:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3950016-3950446:1:exon

position:3950446:1
position: 3950446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3959944-3960615:1:exon

position:3959944:1
position: 3959944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3960615:1
position: 3960615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3963818-3963982:1:exon

position:3963818:1
position: 3963818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3963982:1
position: 3963982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3967513-3968161:1:exon

position:3967513:1
position: 3967513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM69C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FAM69C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM69C
translation: MEKSSRECQDYRGGALGGDLCEDLCEAGQLRYRRCLYYERGKKVLQADWRGRPVVLKSKEEAFSSFPPLGLLDGQPEAGGQDLPEAELLVLAAGEARSALGXXXXXXXXXXXXXXXXXXXXXXXXASLWALLQQEEFVLLSLLRGRSPHAPPVLGSCGHFYAXEHLAAGSPGHRALFPLGPDGGRRGKARAVSGVALSFLDMVRHFDHDFAHRLHLCDVKPENFAIRXDFTVVAIDVDMAFFEPKMREILEQNCTRDEDCNFFDCFSKCDLRAHRCGAQRANSNLQVVCDKIFRHWFSSXRGSSAVSSPLXXQLRAAVQECAAPGAQGAPRVLGRLRSLLQAVLRELRDGEELRPGARSHPRGDSHHGTPGAARKAPAGLSHHPFE
SIO_010081: FAM69C
subclass of: SO_0000673
so part of: FAM69C
location: join(3950426..3950446,3959944..3960615,3963818..3963982,3967513..3967815)
location: region:3950426-3967815:1
so has part: feature:3950426-3950446:1:exon
so has part: feature:3959944-3960615:1:exon
so has part: feature:3963818-3963982:1:exon
so has part: feature:3967513-3967815:1:exon

XP_019842502.1
type: Protein
SIO_000068: ncbiprotein

position:3950426:1
position: 3950426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3967815:1
position: 3967815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3950426-3950446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3959944-3960615:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3963818-3963982:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3967513-3967815:1:exon

LOC109577952
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3968409..3972342)
location: region:3968409-3972342:-1
so has part: feature:3968409-3972342:-1:exon
subclass of: SO_0000011

109577952
type: Gene
SIO_000068: ncbigene

position:3968409:-1
position: 3968409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3972342:-1
position: 3972342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3968409-3972342:-1:exon

LOC109577952
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109577952
product: uncharacterized LOC109577952
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_002183628.1
SIO_010081: LOC109577952
subclass of: SO_0000673
so part of: LOC109577952
location: complement(join(3968409..3968497,3969607..3969656,3972176..3972342))
location: region:3968409-3972342:-1
so has part: feature:3972176-3972342:-1:exon
so has part: feature:3969607-3969656:-1:exon
so has part: feature:3968409-3968497:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3972176-3972342:-1:exon

position:3972176:-1
position: 3972176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3969607-3969656:-1:exon

position:3969607:-1
position: 3969607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3969656:-1
position: 3969656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3968409-3968497:-1:exon

position:3968497:-1
position: 3968497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C24H18orf63
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: C24H18orf63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3998686..4035692)
location: region:3998686-4035692:-1
so has part: feature:3998686-4035692:-1:exon
subclass of: SO_0000010

109577633
type: Gene
SIO_000068: ncbigene

position:3998686:-1
position: 3998686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4035692:-1
position: 4035692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3998686-4035692:-1:exon

C24H18orf63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: C24H18orf63
product: chromosome 24 C18orf63 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_019986405.1
SIO_010081: C24H18orf63
subclass of: SO_0000673
so part of: C24H18orf63
location: complement(join(3998686..3998832,4011890..4012894,4018747..4018930,4019842..4019927,4020100..4020196,4021091..4021200,4023714..4023790,4026138..4026179,4026894..4027005,4030276..4030332,4033227..4033305,4035559..4035692))
location: region:3998686-4035692:-1
so has part: feature:4035559-4035692:-1:exon
so has part: feature:4033227-4033305:-1:exon
so has part: feature:4030276-4030332:-1:exon
so has part: feature:4026894-4027005:-1:exon
so has part: feature:4026138-4026179:-1:exon
so has part: feature:4023714-4023790:-1:exon
so has part: feature:4021091-4021200:-1:exon
so has part: feature:4020100-4020196:-1:exon
so has part: feature:4019842-4019927:-1:exon
so has part: feature:4018747-4018930:-1:exon
so has part: feature:4011890-4012894:-1:exon
so has part: feature:3998686-3998832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4035559-4035692:-1:exon

position:4035559:-1
position: 4035559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4033227-4033305:-1:exon

position:4033227:-1
position: 4033227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4033305:-1
position: 4033305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4030276-4030332:-1:exon

position:4030276:-1
position: 4030276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4030332:-1
position: 4030332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4026894-4027005:-1:exon

position:4026894:-1
position: 4026894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4027005:-1
position: 4027005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4026138-4026179:-1:exon

position:4026138:-1
position: 4026138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4026179:-1
position: 4026179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4023714-4023790:-1:exon

position:4023714:-1
position: 4023714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4023790:-1
position: 4023790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4021091-4021200:-1:exon

position:4021091:-1
position: 4021091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4021200:-1
position: 4021200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4020100-4020196:-1:exon

position:4020100:-1
position: 4020100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4020196:-1
position: 4020196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4019842-4019927:-1:exon

position:4019842:-1
position: 4019842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4019927:-1
position: 4019927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4018747-4018930:-1:exon

position:4018747:-1
position: 4018747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4018930:-1
position: 4018930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4011890-4012894:-1:exon

position:4011890:-1
position: 4011890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4012894:-1
position: 4012894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3998686-3998832:-1:exon

position:3998832:-1
position: 3998832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C24H18orf63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: C24H18orf63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C18orf63 homolog
translation: MNDSKQQSLFFITLPDLHKLCAVKIILSNGVAGTEIRSRQMKICRQLLFLHQDILTSPVPGIFTQIWAVMAITFYKAGKLNAYMEKYGAKVEAPQQVIPIILQNCLSYSLTARLAPAWNKAGHLLIQGREFLSQMGKQSAVVLDINVTSTQVCLSIEVHTVRLPPPQLREFDISQSIIKSFETNQNAVIEEQSILSNWCYVLPSMKMGRLISILHTIPPDCPFHSYEDFQMHWDGLYGYKLPEDLGTIKIYCCIYFKMIGERLFTYPLSCVRSQPIQFFPRVDMEGVLRSFLSDLKSKLPHICGFPIKMTTKPCYYTQELTTLHLQGNKVKPPNLTAQAKSSPAHTPSTRAARAPSFPPCSAAAGHKGARSVSPPKPSGSSALRLQPESVLSSKKAPSDEAAQVLEVPKPTRGNAQAQDTNFSSQHNIAPRFIPVFKSRPLQMTKSILAPENLRRKRVDTESKLFSLKSSEIQDDKPNLDPTTKKRPSHSIQMKAKNLNLKTCRSLQEKNTESYGNMTKNPLSSGKSLITSLSESKQLSNSSVFQMPTSNLDVLKSAVGSQVNGKENLTSKYITQVLGKSHESLKVKRQPHIFESDTDPEDSQPLQPQSVDQTKEADVTDHQLTVSRTAPKSKKLCQDSLKTSKKPHSNTVLCGQSRARKQLHWKWSAASTPHLRSYRASAGTLSSTLAITLTFDLYFSSRLQFEFHKS
SIO_010081: C24H18orf63
subclass of: SO_0000673
so part of: C24H18orf63
location: complement(join(3998686..3998832,4011890..4012894,4018747..4018930,4019842..4019927,4020100..4020196,4021091..4021200,4023714..4023790,4026138..4026179,4026894..4027005,4030276..4030332,4033227..4033305,4035559..4035692))
location: region:3998686-4035692:-1
so has part: feature:4035559-4035692:-1:exon
so has part: feature:4033227-4033305:-1:exon
so has part: feature:4030276-4030332:-1:exon
so has part: feature:4026894-4027005:-1:exon
so has part: feature:4026138-4026179:-1:exon
so has part: feature:4023714-4023790:-1:exon
so has part: feature:4021091-4021200:-1:exon
so has part: feature:4020100-4020196:-1:exon
so has part: feature:4019842-4019927:-1:exon
so has part: feature:4018747-4018930:-1:exon
so has part: feature:4011890-4012894:-1:exon
so has part: feature:3998686-3998832:-1:exon

XP_019841964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4035559-4035692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4033227-4033305:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4030276-4030332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4026894-4027005:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4026138-4026179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4023714-4023790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4021091-4021200:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4020100-4020196:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4019842-4019927:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4018747-4018930:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4011890-4012894:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3998686-3998832:-1:exon

LOC109577893
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4050840..4088395
location: region:4050840-4088395:1
so has part: feature:4050840-4088395:1:exon
subclass of: SO_0000010

109577893
type: Gene
SIO_000068: ncbigene

position:4050840:1
position: 4050840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088395:1
position: 4088395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4050840-4088395:1:exon

LOC109577893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577893
product: cytochrome b5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 262 samples with support for all annotated introns
transcript id: XM_019986849.1
SIO_010081: LOC109577893
subclass of: SO_0000673
so part of: LOC109577893
location: join(4050840..4051086,4080076..4080204,4082277..4082306,4086121..4086155,4088024..4088395)
location: region:4050840-4088395:1
so has part: feature:4050840-4051086:1:exon
so has part: feature:4080076-4080204:1:exon
so has part: feature:4082277-4082306:1:exon
so has part: feature:4086121-4086155:1:exon
so has part: feature:4088024-4088395:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4050840-4051086:1:exon

position:4051086:1
position: 4051086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4080076-4080204:1:exon

position:4080076:1
position: 4080076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4080204:1
position: 4080204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4082277-4082306:1:exon

position:4082277:1
position: 4082277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4082306:1
position: 4082306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4086121-4086155:1:exon

position:4086121:1
position: 4086121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4086155:1
position: 4086155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4088024-4088395:1:exon

position:4088024:1
position: 4088024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109577893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b5
translation: MAEESSKAVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDDRSKITKPSESIITTIDSNPSWWTNWLIPAISALFVALIYHLYTSEN
SIO_010081: LOC109577893
subclass of: SO_0000673
so part of: LOC109577893
location: join(4050958..4051086,4080076..4080204,4082277..4082306,4086121..4086155,4088024..4088105)
location: region:4050958-4088105:1
so has part: feature:4050958-4051086:1:exon
so has part: feature:4080076-4080204:1:exon
so has part: feature:4082277-4082306:1:exon
so has part: feature:4086121-4086155:1:exon
so has part: feature:4088024-4088105:1:exon

XP_019842408.1
type: Protein
SIO_000068: ncbiprotein

position:4050958:1
position: 4050958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088105:1
position: 4088105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4050958-4051086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4080076-4080204:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4082277-4082306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4086121-4086155:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4088024-4088105:1:exon

TIMM21
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TIMM21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4154835..4160598)
location: region:4154835-4160598:-1
so has part: feature:4154835-4160598:-1:exon
subclass of: SO_0000010

109577868
type: Gene
SIO_000068: ncbigene

position:4154835:-1
position: 4154835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4160598:-1
position: 4160598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4154835-4160598:-1:exon

TIMM21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TIMM21
product: translocase of inner mitochondrial membrane 21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 92 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 261 samples with support for all annotated introns
transcript id: XM_019986804.1
SIO_010081: TIMM21
subclass of: SO_0000673
so part of: TIMM21
location: complement(join(4154835..4155253,4155357..4155462,4155550..4155623,4157868..4157965,4158064..4158126,4159960..4160598))
location: region:4154835-4160598:-1
so has part: feature:4159960-4160598:-1:exon
so has part: feature:4158064-4158126:-1:exon
so has part: feature:4157868-4157965:-1:exon
so has part: feature:4155550-4155623:-1:exon
so has part: feature:4155357-4155462:-1:exon
so has part: feature:4154835-4155253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4159960-4160598:-1:exon

position:4159960:-1
position: 4159960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4158064-4158126:-1:exon

position:4158064:-1
position: 4158064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4158126:-1
position: 4158126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4157868-4157965:-1:exon

position:4157868:-1
position: 4157868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4157965:-1
position: 4157965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4155550-4155623:-1:exon

position:4155550:-1
position: 4155550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4155623:-1
position: 4155623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4155357-4155462:-1:exon

position:4155357:-1
position: 4155357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4155462:-1
position: 4155462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4154835-4155253:-1:exon

position:4155253:-1
position: 4155253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIMM21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TIMM21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim21
translation: MICTLLRAVRCTERLHGCPGKPWFLPHSVPHRACSQTEPRWRWGLQEQNTTARPRCIWGVTQRSIWTQVRSPQSAKEDGSKQVSVHRSQGGETVLSTSQKVKEAGRDFTYLIVVLIGISITGGLFYTIFRELFSSSSPNKIYGKALEKCRSHPEVISVFGEPVKGYGEVTRRGRRQHVSFIEYKKDGLKHMRVKFYIQGSEPGKQGTVHLEVKENPESGEYEFRYIFVELEPYSRTIVVEDNRS
SIO_010081: TIMM21
subclass of: SO_0000673
so part of: TIMM21
location: complement(join(4155161..4155253,4155357..4155462,4155550..4155623,4157868..4157965,4158064..4158126,4159960..4160260))
location: region:4155161-4160260:-1
so has part: feature:4159960-4160260:-1:exon
so has part: feature:4158064-4158126:-1:exon
so has part: feature:4157868-4157965:-1:exon
so has part: feature:4155550-4155623:-1:exon
so has part: feature:4155357-4155462:-1:exon
so has part: feature:4155161-4155253:-1:exon

XP_019842363.1
type: Protein
SIO_000068: ncbiprotein

position:4155161:-1
position: 4155161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4160260:-1
position: 4160260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4159960-4160260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4158064-4158126:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4157868-4157965:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4155550-4155623:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4155357-4155462:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4155161-4155253:-1:exon

FBXO15
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: FBXO15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4160744..4199131
location: region:4160744-4199131:1
so has part: feature:4160744-4199131:1:exon
subclass of: SO_0000010

109577867
type: Gene
SIO_000068: ncbigene

position:4160744:1
position: 4160744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4199131:1
position: 4199131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4160744-4199131:1:exon

FBXO15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FBXO15
product: F-box protein 15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019986801.1
SIO_010081: FBXO15
subclass of: SO_0000673
so part of: FBXO15
location: join(4160744..4161362,4167985..4168095,4169899..4170003,4174953..4175195,4175617..4175826,4179324..4179450,4180503..4180585,4181523..4181665,4198735..4199131)
location: region:4160744-4199131:1
so has part: feature:4160744-4161362:1:exon
so has part: feature:4167985-4168095:1:exon
so has part: feature:4169899-4170003:1:exon
so has part: feature:4174953-4175195:1:exon
so has part: feature:4175617-4175826:1:exon
so has part: feature:4179324-4179450:1:exon
so has part: feature:4180503-4180585:1:exon
so has part: feature:4181523-4181665:1:exon
so has part: feature:4198735-4199131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4160744-4161362:1:exon

position:4161362:1
position: 4161362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4167985-4168095:1:exon

position:4167985:1
position: 4167985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4168095:1
position: 4168095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4169899-4170003:1:exon

position:4169899:1
position: 4169899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4170003:1
position: 4170003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4174953-4175195:1:exon

position:4174953:1
position: 4174953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4175195:1
position: 4175195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4175617-4175826:1:exon

position:4175617:1
position: 4175617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4175826:1
position: 4175826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4179324-4179450:1:exon

position:4179324:1
position: 4179324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4179450:1
position: 4179450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4180503-4180585:1:exon

position:4180503:1
position: 4180503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4180585:1
position: 4180585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4181523-4181665:1:exon

position:4181523:1
position: 4181523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4181665:1
position: 4181665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4198735-4199131:1:exon

position:4198735:1
position: 4198735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXO15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FBXO15
product: F-box protein 15, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_019986800.1
SIO_010081: FBXO15
subclass of: SO_0000673
so part of: FBXO15
location: join(4160744..4161362,4167985..4168095,4169899..4170003,4174953..4175195,4175617..4175826,4179324..4179450,4180503..4180585,4181523..4181665,4197459..4197583,4198735..4199113)
location: region:4160744-4199113:1
so has part: feature:4160744-4161362:1:exon
so has part: feature:4167985-4168095:1:exon
so has part: feature:4169899-4170003:1:exon
so has part: feature:4174953-4175195:1:exon
so has part: feature:4175617-4175826:1:exon
so has part: feature:4179324-4179450:1:exon
so has part: feature:4180503-4180585:1:exon
so has part: feature:4181523-4181665:1:exon
so has part: feature:4197459-4197583:1:exon
so has part: feature:4198735-4199113:1:exon

position:4199113:1
position: 4199113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4160744-4161362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4167985-4168095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4169899-4170003:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4174953-4175195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4175617-4175826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4179324-4179450:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4180503-4180585:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4181523-4181665:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4197459-4197583:1:exon

position:4197459:1
position: 4197459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4197583:1
position: 4197583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4198735-4199113:1:exon

FBXO15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FBXO15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 15 isoform X2
translation: MAIGRGRLLQLQWQCLLARPPPLGCFGSAFASPGAAAGRAGFRMRPGAMLPAGPAALSRRARQDKVCRRPSTGCSASLDSLPSEVLLKILSYLDAAALLCAGCVNRRFYHLANDNFIWIRIYSTAFSPRRSHWRVDPAEKTDLSVNLLSAGDKEAGYWKKEYLTKQIASVKAALARVLKPLHPHTGLPVKTKEALRVSGLGWVIILRAADGREYTMEHADLSVNDSSVTVVWYGKDWPPLATLSTLDLCGATPVFMGQSRTPSRIRPRWHSLITKYQLSQLTESSAVGGDRLMRVFCLPPGLVVGLWKREEELAFVMANLHLYCLVERSMLGSPAVPYELPPHTPVSDDSPERGLHGYRLHVDMHSGGASCLCGSFHNLSASKELLYNGPNSSGGVREALLVLQFPGVRAVLPRALRRPQFLGGGILCGLLGFRRKAAHGAGVGRGDGGVLHRQPGPLPAVGESKPVVWDTILSGSNRWQIIIAVCFHRTNWFCSWCLS
SIO_010081: FBXO15
subclass of: SO_0000673
so part of: FBXO15
location: join(4161235..4161362,4167985..4168095,4169899..4170003,4174953..4175195,4175617..4175826,4179324..4179450,4180503..4180585,4181523..4181665,4198735..4199084)
location: region:4161235-4199084:1
so has part: feature:4161235-4161362:1:exon
so has part: feature:4167985-4168095:1:exon
so has part: feature:4169899-4170003:1:exon
so has part: feature:4174953-4175195:1:exon
so has part: feature:4175617-4175826:1:exon
so has part: feature:4179324-4179450:1:exon
so has part: feature:4180503-4180585:1:exon
so has part: feature:4181523-4181665:1:exon
so has part: feature:4198735-4199084:1:exon

XP_019842360.1
type: Protein
SIO_000068: ncbiprotein

position:4161235:1
position: 4161235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4199084:1
position: 4199084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4161235-4161362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4167985-4168095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4169899-4170003:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4174953-4175195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4175617-4175826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4179324-4179450:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4180503-4180585:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4181523-4181665:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4198735-4199084:1:exon

FBXO15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FBXO15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 15 isoform X1
translation: MAIGRGRLLQLQWQCLLARPPPLGCFGSAFASPGAAAGRAGFRMRPGAMLPAGPAALSRRARQDKVCRRPSTGCSASLDSLPSEVLLKILSYLDAAALLCAGCVNRRFYHLANDNFIWIRIYSTAFSPRRSHWRVDPAEKTDLSVNLLSAGDKEAGYWKKEYLTKQIASVKAALARVLKPLHPHTGLPVKTKEALRVSGLGWVIILRAADGREYTMEHADLSVNDSSVTVVWYGKDWPPLATLSTLDLCGATPVFMGQSRTPSRIRPRWHSLITKYQLSQLTESSAVGGDRLMRVFCLPPGLVVGLWKREEELAFVMANLHLYCLVERSMLGSPAVPYELPPHTPVSDDSPERGLHGYRLHVDMHSGGASCLCGSFHNLSASKGYLENEYMKLTVISFKNNTEHLPLIGKVGLSWKTNSFDGCIKSCSIMDLTLLEEYGKPFWCFSSPVCVRCCPGPSDGPSFLGEAYCVDYSDSEGRLHMELVWVEETEEYFIVSLALYLRLAKVNQWFGTQY
SIO_010081: FBXO15
subclass of: SO_0000673
so part of: FBXO15
location: join(4161235..4161362,4167985..4168095,4169899..4170003,4174953..4175195,4175617..4175826,4179324..4179450,4180503..4180585,4181523..4181665,4197459..4197583,4198735..4199004)
location: region:4161235-4199004:1
so has part: feature:4161235-4161362:1:exon
so has part: feature:4167985-4168095:1:exon
so has part: feature:4169899-4170003:1:exon
so has part: feature:4174953-4175195:1:exon
so has part: feature:4175617-4175826:1:exon
so has part: feature:4179324-4179450:1:exon
so has part: feature:4180503-4180585:1:exon
so has part: feature:4181523-4181665:1:exon
so has part: feature:4197459-4197583:1:exon
so has part: feature:4198735-4199004:1:exon

XP_019842359.1
type: Protein
SIO_000068: ncbiprotein

position:4199004:1
position: 4199004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4161235-4161362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4167985-4168095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4169899-4170003:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4174953-4175195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4175617-4175826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4179324-4179450:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4180503-4180585:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4181523-4181665:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4197459-4197583:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4198735-4199004:1:exon

TRNAA-CGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TRNAA-CGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 4585197..4585268
location: region:4585197-4585268:1
so has part: feature:4585197-4585268:1:exon
subclass of: SO_0000663

109578026
type: Gene
SIO_000068: ncbigene

position:4585197:1
position: 4585197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4585268:1
position: 4585268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4585197-4585268:1:exon

TRNAA-CGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9915
gene: TRNAA-CGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon CGC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:4585229..4585231,aa:Ala,seq:cgc)
SIO_010081: TRNAA-CGC
subclass of: SO_0000673
so part of: TRNAA-CGC
location: 4585197..4585268
location: region:4585197-4585268:1
so has part: feature:4585197-4585268:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4585197-4585268:1:exon

NETO1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: NETO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5107259..5209386
location: region:5107259-5209386:1
so has part: feature:5107259-5209386:1:exon
subclass of: SO_0000010

109578008
type: Gene
SIO_000068: ncbigene

position:5107259:1
position: 5107259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5209386:1
position: 5209386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5107259-5209386:1:exon

NETO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: NETO1
product: neuropilin and tolloid like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019987005.1
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5107259..5107576,5109602..5109655,5109892..5110029,5114755..5115003,5164490..5164531,5164650..5164777,5176073..5176301,5203132..5203245,5205980..5206538,5207511..5207585,5208439..5209386)
location: region:5107259-5209386:1
so has part: feature:5107259-5107576:1:exon
so has part: feature:5109602-5109655:1:exon
so has part: feature:5109892-5110029:1:exon
so has part: feature:5114755-5115003:1:exon
so has part: feature:5164490-5164531:1:exon
so has part: feature:5164650-5164777:1:exon
so has part: feature:5176073-5176301:1:exon
so has part: feature:5203132-5203245:1:exon
so has part: feature:5205980-5206538:1:exon
so has part: feature:5207511-5207585:1:exon
so has part: feature:5208439-5209386:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5107259-5107576:1:exon

position:5107576:1
position: 5107576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5109602-5109655:1:exon

position:5109602:1
position: 5109602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5109655:1
position: 5109655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5109892-5110029:1:exon

position:5109892:1
position: 5109892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5110029:1
position: 5110029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5114755-5115003:1:exon

position:5114755:1
position: 5114755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5115003:1
position: 5115003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5164490-5164531:1:exon

position:5164490:1
position: 5164490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5164531:1
position: 5164531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5164650-5164777:1:exon

position:5164650:1
position: 5164650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5164777:1
position: 5164777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5176073-5176301:1:exon

position:5176073:1
position: 5176073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5176301:1
position: 5176301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5203132-5203245:1:exon

position:5203132:1
position: 5203132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5203245:1
position: 5203245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5205980-5206538:1:exon

position:5205980:1
position: 5205980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5206538:1
position: 5206538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5207511-5207585:1:exon

position:5207511:1
position: 5207511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5207585:1
position: 5207585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5208439-5209386:1:exon

position:5208439:1
position: 5208439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NETO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: NETO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 1
translation: MIYGRSLFHIVASLIILHLSGAAKKGTEKQTTSETQKSVQCGTWTKHAEGGIFTSPNYPSKYPPDRECIYIIEAAPRQCIELYFDEKYSIEPSWECKFDHIEVRDGPFGFSPIIGRFCGQQNPPVIKSSGRFLWIKFFADGELESMGFSARYNFTPDPDFKDLGVLKPLPVCEFEMGGPEGIVESIQIMKEGKASASEAVDCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGSSSVEDLKAKFCSTVANDVMLRTGLGVIRMWADEGSRNSRFQMLFTSFQEPPCEGNTFFCHSNMCINNTLVCNGLQNCVYPWDENHCKEKRKAGLLDQLTNTSGTVIGVTSCIVIILIIISVIVQIKQPRKKYVQRKSDFDQTVFQEVFEPPHYELCTLRGTGATADFADVADDFENYHKLRRSSSKCIHDHHCGSQLSSAKGSRSNLSTRDASVLTEMPPQPIKPLIPPMNRRNILVMKHNYSQEAADACDIDEIEEVPTTSHRLSRHEKAVQRFCLIGSLSKHESEYNTTRV
SIO_010081: NETO1
subclass of: SO_0000673
so part of: NETO1
location: join(5107549..5107576,5109602..5109655,5109892..5110029,5114755..5115003,5164490..5164531,5164650..5164777,5176073..5176301,5203132..5203245,5205980..5206538,5207511..5207571)
location: region:5107549-5207571:1
so has part: feature:5107549-5107576:1:exon
so has part: feature:5109602-5109655:1:exon
so has part: feature:5109892-5110029:1:exon
so has part: feature:5114755-5115003:1:exon
so has part: feature:5164490-5164531:1:exon
so has part: feature:5164650-5164777:1:exon
so has part: feature:5176073-5176301:1:exon
so has part: feature:5203132-5203245:1:exon
so has part: feature:5205980-5206538:1:exon
so has part: feature:5207511-5207571:1:exon

XP_019842564.1
type: Protein
SIO_000068: ncbiprotein

position:5107549:1
position: 5107549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5207571:1
position: 5207571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5107549-5107576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5109602-5109655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5109892-5110029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5114755-5115003:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5164490-5164531:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5164650-5164777:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5176073-5176301:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5203132-5203245:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5205980-5206538:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5207511-5207571:1:exon

CBLN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5445883..5451746
location: region:5445883-5451746:1
so has part: feature:5445883-5451746:1:exon
subclass of: SO_0000010

109577634
type: Gene
SIO_000068: ncbigene

position:5445883:1
position: 5445883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5451746:1
position: 5451746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5445883-5451746:1:exon

CBLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CBLN2
product: cerebellin 2 precursor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 13 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986406.1
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5445883..5445983,5446132..5446299,5446351..5446621,5449681..5449800,5450036..5451746)
location: region:5445883-5451746:1
so has part: feature:5445883-5445983:1:exon
so has part: feature:5446132-5446299:1:exon
so has part: feature:5446351-5446621:1:exon
so has part: feature:5449681-5449800:1:exon
so has part: feature:5450036-5451746:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5445883-5445983:1:exon

position:5445983:1
position: 5445983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5446132-5446299:1:exon

position:5446132:1
position: 5446132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5446299:1
position: 5446299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5446351-5446621:1:exon

position:5446351:1
position: 5446351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5446621:1
position: 5446621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5449681-5449800:1:exon

position:5449681:1
position: 5449681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5449800:1
position: 5449800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5450036-5451746:1:exon

position:5450036:1
position: 5450036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CBLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-2
translation: MASPVPDRTPSARPSPGASRDAREGXXGVSRDLLSAGDLLLRTTLALTIRAGDRGQRRLAPAPRIRVRPPALRAPPARMLAPGRDPRGPPSGLGAALALLLLLLPAGCPVRAQNDTEPIVLEGKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: CBLN2
subclass of: SO_0000673
so part of: CBLN2
location: join(5445883..5445983,5446132..5446299,5446351..5446621,5449681..5449800,5450036..5450233)
location: region:5445883-5450233:1
so has part: feature:5445883-5445983:1:exon
so has part: feature:5446132-5446299:1:exon
so has part: feature:5446351-5446621:1:exon
so has part: feature:5449681-5449800:1:exon
so has part: feature:5450036-5450233:1:exon

XP_019841965.1
type: Protein
SIO_000068: ncbiprotein

position:5450233:1
position: 5450233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5445883-5445983:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5446132-5446299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5446351-5446621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5449681-5449800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5450036-5450233:1:exon

LOC109577701
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <5570300..5571501
location: region:5570300-5571501:1
so has part: feature:5570300-5571501:1:exon
subclass of: SO_0000010

109577701
type: Gene
SIO_000068: ncbigene

position:5570300:1
position: 5570300
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:5571501:1
position: 5571501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5570300-5571501:1:exon

LOC109577701
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577701
product: cerebellin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_019986457.1
SIO_010081: LOC109577701
subclass of: SO_0000673
so part of: LOC109577701
location: join(<5570300..5570464,5570700..5571501)
location: region:5570300-5571501:1
so has part: feature:5570300-5570464:1:exon
so has part: feature:5570700-5571501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5570300-5570464:1:exon

position:5570464:1
position: 5570464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5570700-5571501:1:exon

position:5570700:1
position: 5570700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109577701
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-2-like
translation: GGACYVSALFPLLFQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: LOC109577701
subclass of: SO_0000673
so part of: LOC109577701
location: join(<5570300..5570464,5570700..5570897)
location: region:5570300-5570897:1
so has part: feature:5570300-5570464:1:exon
so has part: feature:5570700-5570897:1:exon

XP_019842016.1
type: Protein
SIO_000068: ncbiprotein

position:5570897:1
position: 5570897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5570300-5570464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5570700-5570897:1:exon

LOC109577622
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577622
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7035813..7041794)
location: region:7035813-7041794:-1
so has part: feature:7035813-7041794:-1:exon
subclass of: SO_0000011

109577622
type: Gene
SIO_000068: ncbigene

position:7035813:-1
position: 7035813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7041794:-1
position: 7041794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7035813-7041794:-1:exon

LOC109577622
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109577622
product: uncharacterized LOC109577622
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_002183556.1
SIO_010081: LOC109577622
subclass of: SO_0000673
so part of: LOC109577622
location: complement(join(7035813..7037323,7041280..7041378,7041616..7041794))
location: region:7035813-7041794:-1
so has part: feature:7041616-7041794:-1:exon
so has part: feature:7041280-7041378:-1:exon
so has part: feature:7035813-7037323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7041616-7041794:-1:exon

position:7041616:-1
position: 7041616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7041280-7041378:-1:exon

position:7041280:-1
position: 7041280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7041378:-1
position: 7041378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7035813-7037323:-1:exon

position:7037323:-1
position: 7037323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SOCS6
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: SOCS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7122902..7155635)
location: region:7122902-7155635:-1
so has part: feature:7122902-7155635:-1:exon
subclass of: SO_0000010

109577635
type: Gene
SIO_000068: ncbigene

position:7122902:-1
position: 7122902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7155635:-1
position: 7155635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7122902-7155635:-1:exon

SOCS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SOCS6
product: suppressor of cytokine signaling 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986407.1
SIO_010081: SOCS6
subclass of: SO_0000673
so part of: SOCS6
location: complement(join(7122902..7127520,7127713..7128590,7152503..7152693,7153920..7155635))
location: region:7122902-7155635:-1
so has part: feature:7153920-7155635:-1:exon
so has part: feature:7152503-7152693:-1:exon
so has part: feature:7127713-7128590:-1:exon
so has part: feature:7122902-7127520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7153920-7155635:-1:exon

position:7153920:-1
position: 7153920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7152503-7152693:-1:exon

position:7152503:-1
position: 7152503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7152693:-1
position: 7152693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7127713-7128590:-1:exon

position:7127713:-1
position: 7127713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7128590:-1
position: 7128590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7122902-7127520:-1:exon

position:7127520:-1
position: 7127520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SOCS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SOCS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of cytokine signaling 6
translation: MKKISLKTFRKSFNLSKSKEDAEFMVVQQPALAGDFGKEESLFGSCYGKEMAGCELHGEDEKGGGGKNRAKSESLMGTLKRRLSAKQKAKGKGGAAAGGAADEDTFSSSSAPLVFKDARAPRPMRSTSLRSHHYSPTPWPLRPTASEETCIRMEVRVKALVHSPGTGPALNGVRKDFGELRPAAEPACPCPEPPAAPGSPAPVAGDLRLRLGEHVPVVLGLLPQDYLPYTVPLDGSSPMGGLGRPAAPGPDGPPLSPLLPPLQTDPSQRTFTGLAGPDAHAADSVRCHLNFDPTSAPGVARVYDSVQSSGPLAVTSLTEELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIRDSENGAFCYSRSRLPGSATYPVRLTNPVSRFMQVRSLQYLCRFVIRQYTRIDLIQKLPLPNKMKDYLQEKHY
SIO_010081: SOCS6
subclass of: SO_0000673
so part of: SOCS6
location: complement(join(7126827..7127520,7127713..7128461))
location: region:7126827-7128461:-1
so has part: feature:7127713-7128461:-1:exon
so has part: feature:7126827-7127520:-1:exon

XP_019841966.1
type: Protein
SIO_000068: ncbiprotein

position:7126827:-1
position: 7126827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7128461:-1
position: 7128461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7127713-7128461:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7126827-7127520:-1:exon

RTTN
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: RTTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7225249..7343728
location: region:7225249-7343728:1
so has part: feature:7225249-7343728:1:exon
subclass of: SO_0000010

109577902
type: Gene
SIO_000068: ncbigene

position:7225249:1
position: 7225249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7343728:1
position: 7343728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7225249-7343728:1:exon

RTTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RTTN
product: rotatin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019986866.1
SIO_010081: RTTN
subclass of: SO_0000673
so part of: RTTN
location: join(7225249..7225579,7225905..7226092,7226937..7227114,7229122..7229211,7231220..7231310,7232660..7232774,7233719..7233869,7237927..7238092,7240199..7240377,7242795..7242910,7246136..7246306,7251848..7252060,7253572..7253684,7255474..7255600,7257375..7257500,7258005..7258121,7258951..7259090,7262847..7263018,7264612..7264711,7266668..7266756,7267338..7267455,7269042..7269138,7269768..7269836,7271947..7272135,7272719..7272958,7275205..7275349,7282002..7282156,7283518..7283737,7292670..7292798,7293265..7293375,7295277..7295435,7296595..7296666,7304433..7304622,7306071..7306162,7312135..7312228,7314565..7314757,7316299..7316389,7319534..7319687,7321841..7321978,7322290..7322507,7323112..7323217,7324178..7324275,7325971..7326048,7329366..7329492,7330545..7330747,7334849..7335116,7341090..7341193,7342227..7342296,7343416..7343728)
location: region:7225249-7343728:1
so has part: feature:7225249-7225579:1:exon
so has part: feature:7225905-7226092:1:exon
so has part: feature:7226937-7227114:1:exon
so has part: feature:7229122-7229211:1:exon
so has part: feature:7231220-7231310:1:exon
so has part: feature:7232660-7232774:1:exon
so has part: feature:7233719-7233869:1:exon
so has part: feature:7237927-7238092:1:exon
so has part: feature:7240199-7240377:1:exon
so has part: feature:7242795-7242910:1:exon
so has part: feature:7246136-7246306:1:exon
so has part: feature:7251848-7252060:1:exon
so has part: feature:7253572-7253684:1:exon
so has part: feature:7255474-7255600:1:exon
so has part: feature:7257375-7257500:1:exon
so has part: feature:7258005-7258121:1:exon
so has part: feature:7258951-7259090:1:exon
so has part: feature:7262847-7263018:1:exon
so has part: feature:7264612-7264711:1:exon
so has part: feature:7266668-7266756:1:exon
so has part: feature:7267338-7267455:1:exon
so has part: feature:7269042-7269138:1:exon
so has part: feature:7269768-7269836:1:exon
so has part: feature:7271947-7272135:1:exon
so has part: feature:7272719-7272958:1:exon
so has part: feature:7275205-7275349:1:exon
so has part: feature:7282002-7282156:1:exon
so has part: feature:7283518-7283737:1:exon
so has part: feature:7292670-7292798:1:exon
so has part: feature:7293265-7293375:1:exon
so has part: feature:7295277-7295435:1:exon
so has part: feature:7296595-7296666:1:exon
so has part: feature:7304433-7304622:1:exon
so has part: feature:7306071-7306162:1:exon
so has part: feature:7312135-7312228:1:exon
so has part: feature:7314565-7314757:1:exon
so has part: feature:7316299-7316389:1:exon
so has part: feature:7319534-7319687:1:exon
so has part: feature:7321841-7321978:1:exon
so has part: feature:7322290-7322507:1:exon
so has part: feature:7323112-7323217:1:exon
so has part: feature:7324178-7324275:1:exon
so has part: feature:7325971-7326048:1:exon
so has part: feature:7329366-7329492:1:exon
so has part: feature:7330545-7330747:1:exon
so has part: feature:7334849-7335116:1:exon
so has part: feature:7341090-7341193:1:exon
so has part: feature:7342227-7342296:1:exon
so has part: feature:7343416-7343728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7225249-7225579:1:exon

position:7225579:1
position: 7225579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7225905-7226092:1:exon

position:7225905:1
position: 7225905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7226092:1
position: 7226092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7226937-7227114:1:exon

position:7226937:1
position: 7226937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7227114:1
position: 7227114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7229122-7229211:1:exon

position:7229122:1
position: 7229122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7229211:1
position: 7229211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7231220-7231310:1:exon

position:7231220:1
position: 7231220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7231310:1
position: 7231310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7232660-7232774:1:exon

position:7232660:1
position: 7232660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7232774:1
position: 7232774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7233719-7233869:1:exon

position:7233719:1
position: 7233719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7233869:1
position: 7233869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7237927-7238092:1:exon

position:7237927:1
position: 7237927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7238092:1
position: 7238092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7240199-7240377:1:exon

position:7240199:1
position: 7240199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7240377:1
position: 7240377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7242795-7242910:1:exon

position:7242795:1
position: 7242795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7242910:1
position: 7242910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7246136-7246306:1:exon

position:7246136:1
position: 7246136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7246306:1
position: 7246306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7251848-7252060:1:exon

position:7251848:1
position: 7251848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7252060:1
position: 7252060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7253572-7253684:1:exon

position:7253572:1
position: 7253572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7253684:1
position: 7253684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7255474-7255600:1:exon

position:7255474:1
position: 7255474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7255600:1
position: 7255600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7257375-7257500:1:exon

position:7257375:1
position: 7257375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7257500:1
position: 7257500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7258005-7258121:1:exon

position:7258005:1
position: 7258005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7258121:1
position: 7258121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7258951-7259090:1:exon

position:7258951:1
position: 7258951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7259090:1
position: 7259090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7262847-7263018:1:exon

position:7262847:1
position: 7262847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7263018:1
position: 7263018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7264612-7264711:1:exon

position:7264612:1
position: 7264612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7264711:1
position: 7264711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7266668-7266756:1:exon

position:7266668:1
position: 7266668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7266756:1
position: 7266756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7267338-7267455:1:exon

position:7267338:1
position: 7267338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7267455:1
position: 7267455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7269042-7269138:1:exon

position:7269042:1
position: 7269042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7269138:1
position: 7269138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7269768-7269836:1:exon

position:7269768:1
position: 7269768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7269836:1
position: 7269836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7271947-7272135:1:exon

position:7271947:1
position: 7271947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7272135:1
position: 7272135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7272719-7272958:1:exon

position:7272719:1
position: 7272719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7272958:1
position: 7272958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7275205-7275349:1:exon

position:7275205:1
position: 7275205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7275349:1
position: 7275349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7282002-7282156:1:exon

position:7282002:1
position: 7282002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7282156:1
position: 7282156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7283518-7283737:1:exon

position:7283518:1
position: 7283518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7283737:1
position: 7283737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:7292670-7292798:1:exon

position:7292670:1
position: 7292670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7292798:1
position: 7292798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:7293265-7293375:1:exon

position:7293265:1
position: 7293265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7293375:1
position: 7293375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:7295277-7295435:1:exon

position:7295277:1
position: 7295277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7295435:1
position: 7295435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:7296595-7296666:1:exon

position:7296595:1
position: 7296595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7296666:1
position: 7296666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:7304433-7304622:1:exon

position:7304433:1
position: 7304433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7304622:1
position: 7304622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:7306071-7306162:1:exon

position:7306071:1
position: 7306071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7306162:1
position: 7306162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:7312135-7312228:1:exon

position:7312135:1
position: 7312135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7312228:1
position: 7312228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:7314565-7314757:1:exon

position:7314565:1
position: 7314565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7314757:1
position: 7314757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:7316299-7316389:1:exon

position:7316299:1
position: 7316299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7316389:1
position: 7316389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:7319534-7319687:1:exon

position:7319534:1
position: 7319534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7319687:1
position: 7319687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:7321841-7321978:1:exon

position:7321841:1
position: 7321841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7321978:1
position: 7321978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:7322290-7322507:1:exon

position:7322290:1
position: 7322290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7322507:1
position: 7322507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:7323112-7323217:1:exon

position:7323112:1
position: 7323112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7323217:1
position: 7323217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:7324178-7324275:1:exon

position:7324178:1
position: 7324178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7324275:1
position: 7324275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:7325971-7326048:1:exon

position:7325971:1
position: 7325971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7326048:1
position: 7326048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:7329366-7329492:1:exon

position:7329366:1
position: 7329366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7329492:1
position: 7329492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:7330545-7330747:1:exon

position:7330545:1
position: 7330545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7330747:1
position: 7330747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:7334849-7335116:1:exon

position:7334849:1
position: 7334849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7335116:1
position: 7335116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:7341090-7341193:1:exon

position:7341090:1
position: 7341090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7341193:1
position: 7341193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:7342227-7342296:1:exon

position:7342227:1
position: 7342227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7342296:1
position: 7342296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:7343416-7343728:1:exon

position:7343416:1
position: 7343416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RTTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RTTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rotatin
translation: MVLTGLIRKLGHPLAEIRERALRSILCKLEHSLVCGADLASHRLLFLHLLEWFNFPSVPVKDEVLXLLSRLVKYPLAVQHLVDLGAVEFLSKLRPNVEPNLQAEIDGILDGLFSLPSEVPEMYSSSYQTSQTDLLQQPEILTGYFPQDKSTLQQTEIPSRPVANPTAKCLKFSTFPWLPLTAADRHVLSSNESSLRSSNHTVIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKLAFGGDGKHRLALQSVSCLQQLCTCLRNRLNFHRDPSFFSNKQDAVSQNSSLSYCPDARAAPHSQNPSPGSSXXXXXXVGRTGQRPRGDGQDWDAXSSSGSSSHAHVSSRVSAPSPLDLAPVDLPELAEDALELQLQQLSLPQLCVSLLEAAAPLLRTGSRQMIIRVLELLXEVVVLIGEAISAHLWDDSSLFAIDMKEKLLVVLASLGDTVCYHKSSVSLEQPEALVVHHRMAFVSISLFAVRLLQTLLPVEKASRFLPEPMSAALFFISLDMPVSLEYPNIHEAVVAYLEQLNSENYSIYKRTAEAAYSIECTCNFLSDVGKEGEKNLSELVELADQALRSFSYHQHFPLIKEIISICSKIWKSVQASPLLQGESQKVFLRMLSHPLLQVKVETYHCCLEIVKECLGIHNISKPVSSLCNGIHFLLHPKVLYEISAFGIQDPKNEVSAAAKAILVHLLQGRLRVSAPTWNKFIESLCPVIPVLQGYADTENPLGNCILHLSRESPETDEGVLPSATRLKSMLRLLLVKKPSVRVLALKLLASHLTREEGSDTKRPSIDARVLSRVTNLFIVKKPIELKLDDRRELMIKLETVEKVYGIFVSDDIDLVLRKSAAEQLVVIMQDIKMHAVVKKVXLVDKIIEYLSECVGQDGEVVECLVQPSLMLLRKVLCADPVLRESLSQKTSVLTLLFRVSLIFHEDCTIVTEVGALFCLLLFDEVSRMDMWSDSPSCTPSSPSVFSLPVSVSRRYHLPVHVVGHHAVSPYSMVLPLSADSLALKPVSDMLRMAWNLSWYHGSDNVLKQVNSEAEIQEFLDTLKLSTEDTLTLKMTHTPSGLKDCLCSIVQAAGHREVRAALTRMSFYLLNDRLSFKGGTGPCGVTLKSLSWHTTLNRFLQVLPACTEDEKLLIDIIHFLSKLLKEQRKNVPVELLNWLLEVLLRQSPNPLLDLLVLTESQTREETDDVRTAVRQQLQKELIALFSTLLLSFEAVTDRKCLELFYVFQTQLALKLLQCLRVTDAPHFYGLPSLERTLRGMAHLTACPGWSAHSPLTKPLDICGKYLSGLLEVITSFYVERGGNAMSFMGKGVTKSTVLCLLHLSHEMMAQAQSSGWMSLWFLPLGSQSEDHAPTQQGLAWLIPLWVDRDPEVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFIFQNLLVIPMPSVIIKDYTWQGPCVHDEDSGLSLIGKPALQALLYHCHFYEHLNQMVKHCYLGRYAFDFSFSALNGAPEGNDLNGLDDSFKFWRAPSRMSSQDRDPSSLSTSETMVAASSGSAEFQSLVLSMVPHPEVTHDQLVAQGQREAASPRLPPDSPLSAPLPRQCVFVTPPLLSAMCSLLDSLLVATPGDTAGAFRRTRLIELLCSIAVATLLETSVQELQASLPTSLPAEHTQAQVSFLLEYLSSLSRLLQSCLLVDPDLVIQDELLKPLIPNIIQVLTLCTKDILDVELRSAFYQTWTHLFNLLAALLRRAGPASFPYVTLGLARSWAAVIDTFCRCARLSTTSPALYTASLQFLSVLLTEEAKRRLQDEEKTSLCHSPTVASLLDKTQESQNSLERLTEVILQCYEGKTSKDVLKRVAANALMSLLAVSRRAQRHALKAHLVDSCVEQMKHIHAQLNLGSLKPGRAALRKKEDGFIKELSIAMQLLRNCLYQNEECKGAALDAHLAPVLHALWPWLLMDDSLMQVALQLLCVYTANFPNGCSSLCWSSYGQHPV…
SIO_010081: RTTN
subclass of: SO_0000673
so part of: RTTN
location: join(7225549..7225579,7225905..7226092,7226937..7227114,7229122..7229211,7231220..7231310,7232660..7232774,7233719..7233869,7237927..7238092,7240199..7240377,7242795..7242910,7246136..7246306,7251848..7252060,7253572..7253684,7255474..7255600,7257375..7257500,7258005..7258121,7258951..7259090,7262847..7263018,7264612..7264711,7266668..7266756,7267338..7267455,7269042..7269138,7269768..7269836,7271947..7272135,7272719..7272958,7275205..7275349,7282002..7282156,7283518..7283737,7292670..7292798,7293265..7293375,7295277..7295435,7296595..7296666,7304433..7304622,7306071..7306162,7312135..7312228,7314565..7314757,7316299..7316389,7319534..7319687,7321841..7321978,7322290..7322507,7323112..7323217,7324178..7324275,7325971..7326048,7329366..7329492,7330545..7330747,7334849..7335116,7341090..7341193,7342227..7342296,7343416..7343501)
location: region:7225549-7343501:1
so has part: feature:7225549-7225579:1:exon
so has part: feature:7225905-7226092:1:exon
so has part: feature:7226937-7227114:1:exon
so has part: feature:7229122-7229211:1:exon
so has part: feature:7231220-7231310:1:exon
so has part: feature:7232660-7232774:1:exon
so has part: feature:7233719-7233869:1:exon
so has part: feature:7237927-7238092:1:exon
so has part: feature:7240199-7240377:1:exon
so has part: feature:7242795-7242910:1:exon
so has part: feature:7246136-7246306:1:exon
so has part: feature:7251848-7252060:1:exon
so has part: feature:7253572-7253684:1:exon
so has part: feature:7255474-7255600:1:exon
so has part: feature:7257375-7257500:1:exon
so has part: feature:7258005-7258121:1:exon
so has part: feature:7258951-7259090:1:exon
so has part: feature:7262847-7263018:1:exon
so has part: feature:7264612-7264711:1:exon
so has part: feature:7266668-7266756:1:exon
so has part: feature:7267338-7267455:1:exon
so has part: feature:7269042-7269138:1:exon
so has part: feature:7269768-7269836:1:exon
so has part: feature:7271947-7272135:1:exon
so has part: feature:7272719-7272958:1:exon
so has part: feature:7275205-7275349:1:exon
so has part: feature:7282002-7282156:1:exon
so has part: feature:7283518-7283737:1:exon
so has part: feature:7292670-7292798:1:exon
so has part: feature:7293265-7293375:1:exon
so has part: feature:7295277-7295435:1:exon
so has part: feature:7296595-7296666:1:exon
so has part: feature:7304433-7304622:1:exon
so has part: feature:7306071-7306162:1:exon
so has part: feature:7312135-7312228:1:exon
so has part: feature:7314565-7314757:1:exon
so has part: feature:7316299-7316389:1:exon
so has part: feature:7319534-7319687:1:exon
so has part: feature:7321841-7321978:1:exon
so has part: feature:7322290-7322507:1:exon
so has part: feature:7323112-7323217:1:exon
so has part: feature:7324178-7324275:1:exon
so has part: feature:7325971-7326048:1:exon
so has part: feature:7329366-7329492:1:exon
so has part: feature:7330545-7330747:1:exon
so has part: feature:7334849-7335116:1:exon
so has part: feature:7341090-7341193:1:exon
so has part: feature:7342227-7342296:1:exon
so has part: feature:7343416-7343501:1:exon

XP_019842425.1
type: Protein
SIO_000068: ncbiprotein

position:7225549:1
position: 7225549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7343501:1
position: 7343501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7225549-7225579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7225905-7226092:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7226937-7227114:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7229122-7229211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7231220-7231310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7232660-7232774:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7233719-7233869:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7237927-7238092:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7240199-7240377:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7242795-7242910:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7246136-7246306:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7251848-7252060:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7253572-7253684:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7255474-7255600:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7257375-7257500:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7258005-7258121:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7258951-7259090:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7262847-7263018:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7264612-7264711:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7266668-7266756:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7267338-7267455:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7269042-7269138:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7269768-7269836:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7271947-7272135:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7272719-7272958:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7275205-7275349:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7282002-7282156:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7283518-7283737:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7292670-7292798:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7293265-7293375:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7295277-7295435:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7296595-7296666:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7304433-7304622:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7306071-7306162:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7312135-7312228:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7314565-7314757:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7316299-7316389:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7319534-7319687:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7321841-7321978:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:7322290-7322507:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:7323112-7323217:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:7324178-7324275:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:7325971-7326048:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:7329366-7329492:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:7330545-7330747:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:7334849-7335116:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:7341090-7341193:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:7342227-7342296:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:7343416-7343501:1:exon

CD226
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CD226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7377790..7488509
location: region:7377790-7488509:1
so has part: feature:7377790-7488509:1:exon
subclass of: SO_0000010

109577994
type: Gene
SIO_000068: ncbigene

position:7377790:1
position: 7377790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7488509:1
position: 7488509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7377790-7488509:1:exon

CD226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CD226
product: CD226 molecule, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019986993.1
SIO_010081: CD226
subclass of: SO_0000673
so part of: CD226
location: join(7377790..7378443,7405644..7405807,7406116..7406451,7460112..7460459,7479906..7480008,7485280..7485337,7487667..7488509)
location: region:7377790-7488509:1
so has part: feature:7377790-7378443:1:exon
so has part: feature:7405644-7405807:1:exon
so has part: feature:7406116-7406451:1:exon
so has part: feature:7460112-7460459:1:exon
so has part: feature:7479906-7480008:1:exon
so has part: feature:7485280-7485337:1:exon
so has part: feature:7487667-7488509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7377790-7378443:1:exon

position:7378443:1
position: 7378443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7405644-7405807:1:exon

position:7405644:1
position: 7405644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7405807:1
position: 7405807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7406116-7406451:1:exon

position:7406116:1
position: 7406116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7406451:1
position: 7406451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7460112-7460459:1:exon

position:7460112:1
position: 7460112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7460459:1
position: 7460459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7479906-7480008:1:exon

position:7479906:1
position: 7479906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7480008:1
position: 7480008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7485280-7485337:1:exon

position:7485280:1
position: 7485280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7485337:1
position: 7485337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7487667-7488509:1:exon

position:7487667:1
position: 7487667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CD226
product: CD226 molecule, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_019986992.1
SIO_010081: CD226
subclass of: SO_0000673
so part of: CD226
location: join(7400288..7400933,7405644..7405807,7406116..7406451,7460112..7460459,7479906..7480008,7485280..7485337,7487667..7488509)
location: region:7400288-7488509:1
so has part: feature:7400288-7400933:1:exon
so has part: feature:7405644-7405807:1:exon
so has part: feature:7406116-7406451:1:exon
so has part: feature:7460112-7460459:1:exon
so has part: feature:7479906-7480008:1:exon
so has part: feature:7485280-7485337:1:exon
so has part: feature:7487667-7488509:1:exon

position:7400288:1
position: 7400288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7400288-7400933:1:exon

position:7400933:1
position: 7400933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7405644-7405807:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7406116-7406451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7460112-7460459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7479906-7480008:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7485280-7485337:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7487667-7488509:1:exon

CD226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CD226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD226 antigen
translation: MDHXTLLLAILYVYTAPCEEIFWDTTVKLAKNMTLECVYPLADTVTQMEWFKIKMERESMAIFNPAFHGIIREAYTDRVYFSNHTMASNDMTLSFHNASEADXGFYSCLLHTFPHGTWEKVIQVVPPDNFEDAGPPNSQMVSEPGKNITLTCEPRENHLLEEVSWEKIQPQQIDLLISCNLSQGRNYTSKYPRQILSNCNKGMKKAFVTMPNVIGSDSGLYRCGFKASTGEKETFVMRLTVTNGETKNSYIPFVAGGAVLLFLLVILITTITVITYKRKKRQQKRGLFKDVWITQNRATNNYRNPFPPNPPAGGAGEDIYVNHPVFCLGXRARV
SIO_010081: CD226
subclass of: SO_0000673
so part of: CD226
location: join(7405762..7405807,7406116..7406451,7460112..7460459,7479906..7480008,7485280..7485337,7487667..7487780)
location: region:7405762-7487780:1
so has part: feature:7405762-7405807:1:exon
so has part: feature:7406116-7406451:1:exon
so has part: feature:7460112-7460459:1:exon
so has part: feature:7479906-7480008:1:exon
so has part: feature:7485280-7485337:1:exon
so has part: feature:7487667-7487780:1:exon

XP_019842551.1
type: Protein
SIO_000068: ncbiprotein

position:7405762:1
position: 7405762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7487780:1
position: 7487780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7405762-7405807:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7406116-7406451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7460112-7460459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7479906-7480008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7485280-7485337:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7487667-7487780:1:exon

CD226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CD226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD226 antigen
translation: MDHXTLLLAILYVYTAPCEEIFWDTTVKLAKNMTLECVYPLADTVTQMEWFKIKMERESMAIFNPAFHGIIREAYTDRVYFSNHTMASNDMTLSFHNASEADXGFYSCLLHTFPHGTWEKVIQVVPPDNFEDAGPPNSQMVSEPGKNITLTCEPRENHLLEEVSWEKIQPQQIDLLISCNLSQGRNYTSKYPRQILSNCNKGMKKAFVTMPNVIGSDSGLYRCGFKASTGEKETFVMRLTVTNGETKNSYIPFVAGGAVLLFLLVILITTITVITYKRKKRQQKRGLFKDVWITQNRATNNYRNPFPPNPPAGGAGEDIYVNHPVFCLGXRARV
SIO_010081: CD226
subclass of: SO_0000673
so part of: CD226
location: join(7405762..7405807,7406116..7406451,7460112..7460459,7479906..7480008,7485280..7485337,7487667..7487780)
location: region:7405762-7487780:1
so has part: feature:7405762-7405807:1:exon
so has part: feature:7406116-7406451:1:exon
so has part: feature:7460112-7460459:1:exon
so has part: feature:7479906-7480008:1:exon
so has part: feature:7485280-7485337:1:exon
so has part: feature:7487667-7487780:1:exon

XP_019842552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7405762-7405807:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7406116-7406451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7460112-7460459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7479906-7480008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7485280-7485337:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7487667-7487780:1:exon

DOK6
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: DOK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7502744..8047585)
location: region:7502744-8047585:-1
so has part: feature:7502744-8047585:-1:exon
subclass of: SO_0000010

109577982
type: Gene
SIO_000068: ncbigene

position:7502744:-1
position: 7502744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8047585:-1
position: 8047585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7502744-8047585:-1:exon

DOK6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: DOK6
product: docking protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986984.1
SIO_010081: DOK6
subclass of: SO_0000673
so part of: DOK6
location: complement(join(7502744..7510429,7586604..7586721,7601618..7601756,7657673..7657862,7673877..7673996,7748915..7749029,7945478..7945585,8047484..8047585))
location: region:7502744-8047585:-1
so has part: feature:8047484-8047585:-1:exon
so has part: feature:7945478-7945585:-1:exon
so has part: feature:7748915-7749029:-1:exon
so has part: feature:7673877-7673996:-1:exon
so has part: feature:7657673-7657862:-1:exon
so has part: feature:7601618-7601756:-1:exon
so has part: feature:7586604-7586721:-1:exon
so has part: feature:7502744-7510429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8047484-8047585:-1:exon

position:8047484:-1
position: 8047484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7945478-7945585:-1:exon

position:7945478:-1
position: 7945478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7945585:-1
position: 7945585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7748915-7749029:-1:exon

position:7748915:-1
position: 7748915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7749029:-1
position: 7749029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7673877-7673996:-1:exon

position:7673877:-1
position: 7673877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7673996:-1
position: 7673996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7657673-7657862:-1:exon

position:7657673:-1
position: 7657673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7657862:-1
position: 7657862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7601618-7601756:-1:exon

position:7601618:-1
position: 7601618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7601756:-1
position: 7601756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7586604-7586721:-1:exon

position:7586604:-1
position: 7586604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7586721:-1
position: 7586721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7502744-7510429:-1:exon

position:7510429:-1
position: 7510429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DOK6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: DOK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: docking protein 6
translation: MASNFNDIVKQGYVKIRSRKLGIFRRXWLVFKKASSKGPRRLEKFPDEKAAYFRNFHKVTELHNIKNITRLPRETKKHAVAIIFHDETSKTFACESELEAEEWCKHLCMECLGTRLNDISLGEPDLLAAGVQREQNERFNVYLMPTPNLDIYGECTMQITHENIYLWDIHNAKVKLVMWPLSSLRRYGRDSTWFTFESGRMCDTGEGLFTFQTREGEMIYQKVHSATLAIAEQHERLMLEMEQKARLQTSLTEPMTLSKSISLPRSAYWHHITRQSSVGEIYSLQGHGFGPSKMSRAQTFPSYASEQSEETQPALSRSSSYGFSYSSSLIQ
SIO_010081: DOK6
subclass of: SO_0000673
so part of: DOK6
location: complement(join(7510290..7510429,7586604..7586721,7601618..7601756,7657673..7657862,7673877..7673996,7748915..7749029,7945478..7945585,8047484..8047549))
location: region:7510290-8047549:-1
so has part: feature:8047484-8047549:-1:exon
so has part: feature:7945478-7945585:-1:exon
so has part: feature:7748915-7749029:-1:exon
so has part: feature:7673877-7673996:-1:exon
so has part: feature:7657673-7657862:-1:exon
so has part: feature:7601618-7601756:-1:exon
so has part: feature:7586604-7586721:-1:exon
so has part: feature:7510290-7510429:-1:exon

XP_019842543.1
type: Protein
SIO_000068: ncbiprotein

position:7510290:-1
position: 7510290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8047549:-1
position: 8047549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8047484-8047549:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7945478-7945585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7748915-7749029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7673877-7673996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7657673-7657862:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7601618-7601756:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7586604-7586721:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7510290-7510429:-1:exon

CCDC102B
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CCDC102B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8408789..8696010)
location: region:8408789-8696010:-1
so has part: feature:8408789-8696010:-1:exon
subclass of: SO_0000010

109578018
type: Gene
SIO_000068: ncbigene

position:8408789:-1
position: 8408789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8696010:-1
position: 8696010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8408789-8696010:-1:exon

CCDC102B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CCDC102B
product: coiled-coil domain containing 102B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019987018.1
SIO_010081: CCDC102B
subclass of: SO_0000673
so part of: CCDC102B
location: complement(join(8408789..8409314,8443002..8443172,8544935..8545144,8567676..8567792,8589474..8589582,8599797..8600017,8601375..8601981,8695823..8696010))
location: region:8408789-8696010:-1
so has part: feature:8695823-8696010:-1:exon
so has part: feature:8601375-8601981:-1:exon
so has part: feature:8599797-8600017:-1:exon
so has part: feature:8589474-8589582:-1:exon
so has part: feature:8567676-8567792:-1:exon
so has part: feature:8544935-8545144:-1:exon
so has part: feature:8443002-8443172:-1:exon
so has part: feature:8408789-8409314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8695823-8696010:-1:exon

position:8695823:-1
position: 8695823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8601375-8601981:-1:exon

position:8601375:-1
position: 8601375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8601981:-1
position: 8601981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8599797-8600017:-1:exon

position:8599797:-1
position: 8599797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8600017:-1
position: 8600017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8589474-8589582:-1:exon

position:8589474:-1
position: 8589474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8589582:-1
position: 8589582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8567676-8567792:-1:exon

position:8567676:-1
position: 8567676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8567792:-1
position: 8567792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8544935-8545144:-1:exon

position:8544935:-1
position: 8544935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8545144:-1
position: 8545144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8443002-8443172:-1:exon

position:8443002:-1
position: 8443002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8443172:-1
position: 8443172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8408789-8409314:-1:exon

position:8409314:-1
position: 8409314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC102B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CCDC102B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 102B
translation: MNLDSIHRLIEETXIFGMQQSCVRSPCDLAAPAPARGDPGSSCPSPLGPQSPAARSGRAPSWSTSEWDIRAELRLRELEEVKARAAQMEKTMRWWSDCTANWREKWSKVRAERNSAREEGRQLRIKLDMAVKELSALKKKQPLPHPAEATQDRKLPGFPEVARAQRDPLQXGSKTCESIRECLGKREFPTKENANSKEASLIIDPLKLSEEMKLSLDCPDLFKNGXSENCTVRPGLRLQAINLPLENEMPEISALQGHLDDFQKVLWKEREMRLSLEKEIERLESALSVWKWKYEELKESKAKSLKQFDILHGQHKNEXEEVSGLIREESKSQNSNDRVVYELRAELERLQAENTSEWDKRELLEKEKQGLERENRRLKVQVKEMEELLHRRNRLSENXEGPDFKTSGVELQEKNKELVDLQHAYCKLSRQYQAKTAELTHANNLVDQNEAEVKKLRLRVEELKWGLNQKEDKLDDFLNQIHKLQRSLNEQKETNENLEIKLRHLQNR
SIO_010081: CCDC102B
subclass of: SO_0000673
so part of: CCDC102B
location: complement(join(8409207..8409314,8443002..8443172,8544935..8545144,8567676..8567792,8589474..8589582,8599797..8600017,8601375..8601965))
location: region:8409207-8601965:-1
so has part: feature:8601375-8601965:-1:exon
so has part: feature:8599797-8600017:-1:exon
so has part: feature:8589474-8589582:-1:exon
so has part: feature:8567676-8567792:-1:exon
so has part: feature:8544935-8545144:-1:exon
so has part: feature:8443002-8443172:-1:exon
so has part: feature:8409207-8409314:-1:exon

XP_019842577.1
type: Protein
SIO_000068: ncbiprotein

position:8409207:-1
position: 8409207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8601965:-1
position: 8601965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8601375-8601965:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8599797-8600017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8589474-8589582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8567676-8567792:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8544935-8545144:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8443002-8443172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8409207-8409314:-1:exon

TMX3
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TMX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8748643..8786980
location: region:8748643-8786980:1
so has part: feature:8748643-8786980:1:exon
subclass of: SO_0000010

109577636
type: Gene
SIO_000068: ncbigene

position:8748643:1
position: 8748643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8786980:1
position: 8786980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8748643-8786980:1:exon

TMX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TMX3
product: thioredoxin related transmembrane protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 62 ESTs, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986408.1
SIO_010081: TMX3
subclass of: SO_0000673
so part of: TMX3
location: join(8748643..8748724,8748881..8749067,8749584..8749759,8750200..8750254,8753538..8753577,8754802..8754925,8761137..8761182,8762468..8762548,8764586..8764685,8765358..8765435,8768042..8768108,8769530..8769628,8772003..8772060,8772259..8772312,8775658..8775714,8780712..8780841,8782026..8782094,8783580..8786980)
location: region:8748643-8786980:1
so has part: feature:8748643-8748724:1:exon
so has part: feature:8748881-8749067:1:exon
so has part: feature:8749584-8749759:1:exon
so has part: feature:8750200-8750254:1:exon
so has part: feature:8753538-8753577:1:exon
so has part: feature:8754802-8754925:1:exon
so has part: feature:8761137-8761182:1:exon
so has part: feature:8762468-8762548:1:exon
so has part: feature:8764586-8764685:1:exon
so has part: feature:8765358-8765435:1:exon
so has part: feature:8768042-8768108:1:exon
so has part: feature:8769530-8769628:1:exon
so has part: feature:8772003-8772060:1:exon
so has part: feature:8772259-8772312:1:exon
so has part: feature:8775658-8775714:1:exon
so has part: feature:8780712-8780841:1:exon
so has part: feature:8782026-8782094:1:exon
so has part: feature:8783580-8786980:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8748643-8748724:1:exon

position:8748724:1
position: 8748724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8748881-8749067:1:exon

position:8748881:1
position: 8748881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8749067:1
position: 8749067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8749584-8749759:1:exon

position:8749584:1
position: 8749584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8749759:1
position: 8749759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8750200-8750254:1:exon

position:8750200:1
position: 8750200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8750254:1
position: 8750254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8753538-8753577:1:exon

position:8753538:1
position: 8753538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8753577:1
position: 8753577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8754802-8754925:1:exon

position:8754802:1
position: 8754802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8754925:1
position: 8754925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8761137-8761182:1:exon

position:8761137:1
position: 8761137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8761182:1
position: 8761182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8762468-8762548:1:exon

position:8762468:1
position: 8762468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8762548:1
position: 8762548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8764586-8764685:1:exon

position:8764586:1
position: 8764586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8764685:1
position: 8764685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8765358-8765435:1:exon

position:8765358:1
position: 8765358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8765435:1
position: 8765435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8768042-8768108:1:exon

position:8768042:1
position: 8768042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8768108:1
position: 8768108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8769530-8769628:1:exon

position:8769530:1
position: 8769530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8769628:1
position: 8769628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8772003-8772060:1:exon

position:8772003:1
position: 8772003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8772060:1
position: 8772060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8772259-8772312:1:exon

position:8772259:1
position: 8772259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8772312:1
position: 8772312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8775658-8775714:1:exon

position:8775658:1
position: 8775658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8775714:1
position: 8775714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8780712-8780841:1:exon

position:8780712:1
position: 8780712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8780841:1
position: 8780841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8782026-8782094:1:exon

position:8782026:1
position: 8782026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8782094:1
position: 8782094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8783580-8786980:1:exon

position:8783580:1
position: 8783580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TMX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein disulfide-isomerase TMX3
translation: MEFTPVKQISQVANGGQRKFQIHSANTFWRAFNFRERRPGAHARTLGSHAPRGGSGRRGFGAAIGHACQFRACVPAPRRHCDSAHAQRGSSEASSPARARPGRAPGLCGVAWGPAGPAQSRXRLAVLPTMGXLAPFSSHACPALLRDQFFLLDLAXCKGHVEDLDDSFKENRKDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSLGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKGDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFEHMQKRHRVFFVYIGGESPLKEKYIDAASELIVYTYFFSASEEVVPAYVTLKEMPAVLVFKDETYFVYDEYEDGDLSSWINXERFQNYLTMDGFLLYELGDTGKLVAIAVIDEKNTSVEHTRLKSIIQEVARDYRDQFHRDFQFGHMDGNDYINTLLMDELKVPTVVVLNTSNQQYFLLDRQIKNAEDMVQFINNILDGTVDAQGGDSILQRLKRIVFDAKSTVVSIFRSSPLMGCFLFGLPLGVISIMCYGICTADADGXYIEERYEVSKNEPDDSPEPAERPEPPQPRGAXXPLPXPQEPKDVLEKKKD
SIO_010081: TMX3
subclass of: SO_0000673
so part of: TMX3
location: join(8748643..8748724,8748881..8749067,8749584..8749759,8750200..8750254,8753538..8753577,8754802..8754925,8761137..8761182,8762468..8762548,8764586..8764685,8765358..8765435,8768042..8768108,8769530..8769628,8772003..8772060,8772259..8772312,8775658..8775714,8780712..8780841,8782026..8782094,8783580..8783840)
location: region:8748643-8783840:1
so has part: feature:8748643-8748724:1:exon
so has part: feature:8748881-8749067:1:exon
so has part: feature:8749584-8749759:1:exon
so has part: feature:8750200-8750254:1:exon
so has part: feature:8753538-8753577:1:exon
so has part: feature:8754802-8754925:1:exon
so has part: feature:8761137-8761182:1:exon
so has part: feature:8762468-8762548:1:exon
so has part: feature:8764586-8764685:1:exon
so has part: feature:8765358-8765435:1:exon
so has part: feature:8768042-8768108:1:exon
so has part: feature:8769530-8769628:1:exon
so has part: feature:8772003-8772060:1:exon
so has part: feature:8772259-8772312:1:exon
so has part: feature:8775658-8775714:1:exon
so has part: feature:8780712-8780841:1:exon
so has part: feature:8782026-8782094:1:exon
so has part: feature:8783580-8783840:1:exon

XP_019841967.1
type: Protein
SIO_000068: ncbiprotein

position:8783840:1
position: 8783840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8748643-8748724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8748881-8749067:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8749584-8749759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8750200-8750254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8753538-8753577:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8754802-8754925:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8761137-8761182:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8762468-8762548:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8764586-8764685:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8765358-8765435:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8768042-8768108:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8769530-8769628:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8772003-8772060:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8772259-8772312:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8775658-8775714:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8780712-8780841:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8782026-8782094:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8783580-8783840:1:exon

LOC109577966
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8845694..8846976)
location: region:8845694-8846976:-1
so has part: feature:8845694-8846976:-1:exon
subclass of: SO_0000010

109577966
type: Gene
SIO_000068: ncbigene

position:8845694:-1
position: 8845694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8846976:-1
position: 8846976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8845694-8846976:-1:exon

LOC109577966
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577966
product: HIG1 domain family member 1A, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 60 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986964.1
SIO_010081: LOC109577966
subclass of: SO_0000673
so part of: LOC109577966
location: complement(8845694..8846976)
location: region:8845694-8846976:-1
so has part: feature:8845694-8846976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8845694-8846976:-1:exon

LOC109577966
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HIG1 domain family member 1A, mitochondrial
translation: MSSDTDISLSSYDEDQGSKLIRKAREAPFVPIGMAGFAAIVAYGLYRLKSRGHTKMSVHLIHMRVAAQGFVVGAMTLGMGYSLYQEFWGKPKP
SIO_010081: LOC109577966
subclass of: SO_0000673
so part of: LOC109577966
location: complement(8846645..8846926)
location: region:8846645-8846926:-1
so has part: feature:8846645-8846926:-1:exon

XP_019842523.1
type: Protein
SIO_000068: ncbiprotein

position:8846645:-1
position: 8846645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8846926:-1
position: 8846926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8846645-8846926:-1:exon

DSEL
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: DSEL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9830260..9849258
location: region:9830260-9849258:1
so has part: feature:9830260-9849258:1:exon
subclass of: SO_0000010

109577913
type: Gene
SIO_000068: ncbigene

position:9830260:1
position: 9830260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9849258:1
position: 9849258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9830260-9849258:1:exon

DSEL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: DSEL
product: dermatan sulfate epimerase-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019986885.1
SIO_010081: DSEL
subclass of: SO_0000673
so part of: DSEL
location: join(9830260..9830425,9831281..9835829,9846130..9849258)
location: region:9830260-9849258:1
so has part: feature:9830260-9830425:1:exon
so has part: feature:9831281-9835829:1:exon
so has part: feature:9846130-9849258:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9830260-9830425:1:exon

position:9830425:1
position: 9830425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9831281-9835829:1:exon

position:9831281:1
position: 9831281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9835829:1
position: 9835829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9846130-9849258:1:exon

position:9846130:1
position: 9846130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DSEL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: DSEL
product: dermatan sulfate epimerase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 17 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 140 samples with support for all annotated introns
transcript id: XM_019986882.1
SIO_010081: DSEL
subclass of: SO_0000673
so part of: DSEL
location: join(9830260..9830425,9831281..9837638)
location: region:9830260-9837638:1
so has part: feature:9830260-9830425:1:exon
so has part: feature:9831281-9837638:1:exon

position:9837638:1
position: 9837638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9830260-9830425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9831281-9837638:1:exon

DSEL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: DSEL
product: dermatan sulfate epimerase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_019986883.1
SIO_010081: DSEL
subclass of: SO_0000673
so part of: DSEL
location: join(9830260..9830425,9831281..9835829,9836441..9837638)
location: region:9830260-9837638:1
so has part: feature:9830260-9830425:1:exon
so has part: feature:9831281-9835829:1:exon
so has part: feature:9836441-9837638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9830260-9830425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9831281-9835829:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9836441-9837638:1:exon

position:9836441:1
position: 9836441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DSEL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: DSEL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dermatan-sulfate epimerase-like protein
translation: MALMFTGHCLFLVLVMFAFSTLEESVSNYSDWAVFPDDIDPFKTQRVQDVRPNQKPKKSMLHPXLYFDAGEIQAMRQKSRTTHLHLFRAIRSAVTAMLSNPTYYLPPPKHADFAAKWNEIYGNNLPPLALYCLLCPEDKVAFEFALEYMDRMVGYKDWLVENAPGDEVPVGHSLTGFATAFDFLYNLLDGRRRQKYLEKIWVITEEMYEYSKVRSWGKQLLHNHQATNMIALLTGALVTGVDKGXKVNLWKQVVVDVMEKTMFLLNHIVDGSLDEGVAYGSYTAKSVTQYVFLAQRHFNINNLDNNWLKMHFWFYYATLLPGFQRTVGIADSNYNWFYGPESQLVFLDKFVLKNGAGNWLAQQIRRHRPKDGPMVPSTAQRWSTLHTEYIWYDPQLTPQPPAEYGTAKMHMFPNWGVVTYGAGLPNTQTNTFVSFKSGKLGGRAVYDIVHFQPYSWIDGWRSFNPGHEHPDQNSFTFAPNGQVFVSEALYGPKLSHLNNVLVFAPSPTSQCNKPWEGQLGECAQWLKWTGEEVGDAAGEIITASQHGDMIFVSGEAVSAYSSAMKLKSVYRALLLLNSQTLLVVDHVEKQEDSPIKSVSAFFHNLDIDFKYIPYRFMNRYNGALMDVWDAHYKMFWFDHRGSSPLASIQEAEQAAEFKKRWTQFVNVTFQMESAITRIAYVFYGPYVNVSSCRFIDNSNSGLQLSLNVNNTDHVVSIVTDYQNLKTRFDYLGFGGFATVADQAQVTRFGLGTEAXVKPIRRDRVIFPFGFKFNVAVGLILCIGLVILTFQWRFYLSFRKLMRWILILVIALWSVELLDVWSACTQPICAKWARPETEASGQALAPGGQRTDPPDVVITSLPGSGAEILKQLFFNSSDFLYIRVPTAYIDIPETELEIDSFVDACEWTASEVHGVRFRLLRGWLQSLVRDTKLHLQNIHLHEPSRGKLAQYFSMNKDKKRKLKRRESLAEQRSRMKGAFDRDAEYVRALRRHLVHYPSARPVLSLGSGSWTLKLHFFXEVLGASMRALYVVRDPRAWVYSMLYSSKPSLYSLKNVQEHLAKLFKTEGSAGRCTLNSGYAVEYELLRKELLASRPHPVSLLAHAWLANTAAALRLNADLLPTSYQLIKFEDLVHFPQNTTERIFAFLGIPLSPATLNQILFATSTNLFYLPYEGEISPANTNVWKRNLPKDEIKLIENICWTLMDRLGYPKFMD
SIO_010081: DSEL
subclass of: SO_0000673
so part of: DSEL
location: 9832182..9835820
location: region:9832182-9835820:1
so has part: feature:9832182-9835820:1:exon

XP_019842441.1
type: Protein
SIO_000068: ncbiprotein

position:9832182:1
position: 9832182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9835820:1
position: 9835820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9832182-9835820:1:exon

DSEL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: DSEL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dermatan-sulfate epimerase-like protein
translation: MALMFTGHCLFLVLVMFAFSTLEESVSNYSDWAVFPDDIDPFKTQRVQDVRPNQKPKKSMLHPXLYFDAGEIQAMRQKSRTTHLHLFRAIRSAVTAMLSNPTYYLPPPKHADFAAKWNEIYGNNLPPLALYCLLCPEDKVAFEFALEYMDRMVGYKDWLVENAPGDEVPVGHSLTGFATAFDFLYNLLDGRRRQKYLEKIWVITEEMYEYSKVRSWGKQLLHNHQATNMIALLTGALVTGVDKGXKVNLWKQVVVDVMEKTMFLLNHIVDGSLDEGVAYGSYTAKSVTQYVFLAQRHFNINNLDNNWLKMHFWFYYATLLPGFQRTVGIADSNYNWFYGPESQLVFLDKFVLKNGAGNWLAQQIRRHRPKDGPMVPSTAQRWSTLHTEYIWYDPQLTPQPPAEYGTAKMHMFPNWGVVTYGAGLPNTQTNTFVSFKSGKLGGRAVYDIVHFQPYSWIDGWRSFNPGHEHPDQNSFTFAPNGQVFVSEALYGPKLSHLNNVLVFAPSPTSQCNKPWEGQLGECAQWLKWTGEEVGDAAGEIITASQHGDMIFVSGEAVSAYSSAMKLKSVYRALLLLNSQTLLVVDHVEKQEDSPIKSVSAFFHNLDIDFKYIPYRFMNRYNGALMDVWDAHYKMFWFDHRGSSPLASIQEAEQAAEFKKRWTQFVNVTFQMESAITRIAYVFYGPYVNVSSCRFIDNSNSGLQLSLNVNNTDHVVSIVTDYQNLKTRFDYLGFGGFATVADQAQVTRFGLGTEAXVKPIRRDRVIFPFGFKFNVAVGLILCIGLVILTFQWRFYLSFRKLMRWILILVIALWSVELLDVWSACTQPICAKWARPETEASGQALAPGGQRTDPPDVVITSLPGSGAEILKQLFFNSSDFLYIRVPTAYIDIPETELEIDSFVDACEWTASEVHGVRFRLLRGWLQSLVRDTKLHLQNIHLHEPSRGKLAQYFSMNKDKKRKLKRRESLAEQRSRMKGAFDRDAEYVRALRRHLVHYPSARPVLSLGSGSWTLKLHFFXEVLGASMRALYVVRDPRAWVYSMLYSSKPSLYSLKNVQEHLAKLFKTEGSAGRCTLNSGYAVEYELLRKELLASRPHPVSLLAHAWLANTAAALRLNADLLPTSYQLIKFEDLVHFPQNTTERIFAFLGIPLSPATLNQILFATSTNLFYLPYEGEISPANTNVWKRNLPKDEIKLIENICWTLMDRLGYPKFMD
SIO_010081: DSEL
subclass of: SO_0000673
so part of: DSEL
location: 9832182..9835820
location: region:9832182-9835820:1
so has part: feature:9832182-9835820:1:exon

XP_019842442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9832182-9835820:1:exon

DSEL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: DSEL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dermatan-sulfate epimerase-like protein
translation: MALMFTGHCLFLVLVMFAFSTLEESVSNYSDWAVFPDDIDPFKTQRVQDVRPNQKPKKSMLHPXLYFDAGEIQAMRQKSRTTHLHLFRAIRSAVTAMLSNPTYYLPPPKHADFAAKWNEIYGNNLPPLALYCLLCPEDKVAFEFALEYMDRMVGYKDWLVENAPGDEVPVGHSLTGFATAFDFLYNLLDGRRRQKYLEKIWVITEEMYEYSKVRSWGKQLLHNHQATNMIALLTGALVTGVDKGXKVNLWKQVVVDVMEKTMFLLNHIVDGSLDEGVAYGSYTAKSVTQYVFLAQRHFNINNLDNNWLKMHFWFYYATLLPGFQRTVGIADSNYNWFYGPESQLVFLDKFVLKNGAGNWLAQQIRRHRPKDGPMVPSTAQRWSTLHTEYIWYDPQLTPQPPAEYGTAKMHMFPNWGVVTYGAGLPNTQTNTFVSFKSGKLGGRAVYDIVHFQPYSWIDGWRSFNPGHEHPDQNSFTFAPNGQVFVSEALYGPKLSHLNNVLVFAPSPTSQCNKPWEGQLGECAQWLKWTGEEVGDAAGEIITASQHGDMIFVSGEAVSAYSSAMKLKSVYRALLLLNSQTLLVVDHVEKQEDSPIKSVSAFFHNLDIDFKYIPYRFMNRYNGALMDVWDAHYKMFWFDHRGSSPLASIQEAEQAAEFKKRWTQFVNVTFQMESAITRIAYVFYGPYVNVSSCRFIDNSNSGLQLSLNVNNTDHVVSIVTDYQNLKTRFDYLGFGGFATVADQAQVTRFGLGTEAXVKPIRRDRVIFPFGFKFNVAVGLILCIGLVILTFQWRFYLSFRKLMRWILILVIALWSVELLDVWSACTQPICAKWARPETEASGQALAPGGQRTDPPDVVITSLPGSGAEILKQLFFNSSDFLYIRVPTAYIDIPETELEIDSFVDACEWTASEVHGVRFRLLRGWLQSLVRDTKLHLQNIHLHEPSRGKLAQYFSMNKDKKRKLKRRESLAEQRSRMKGAFDRDAEYVRALRRHLVHYPSARPVLSLGSGSWTLKLHFFXEVLGASMRALYVVRDPRAWVYSMLYSSKPSLYSLKNVQEHLAKLFKTEGSAGRCTLNSGYAVEYELLRKELLASRPHPVSLLAHAWLANTAAALRLNADLLPTSYQLIKFEDLVHFPQNTTERIFAFLGIPLSPATLNQILFATSTNLFYLPYEGEISPANTNVWKRNLPKDEIKLIENICWTLMDRLGYPKFMD
SIO_010081: DSEL
subclass of: SO_0000673
so part of: DSEL
location: 9832182..9835820
location: region:9832182-9835820:1
so has part: feature:9832182-9835820:1:exon

XP_019842444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9832182-9835820:1:exon

LOC109577638
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10593588..10651940
location: region:10593588-10651940:1
so has part: feature:10593588-10651940:1:exon
subclass of: SO_0000010

109577638
type: Gene
SIO_000068: ncbigene

position:10593588:1
position: 10593588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10651940:1
position: 10651940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10593588-10651940:1:exon

LOC109577638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577638
product: cadherin-19-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019986409.1
SIO_010081: LOC109577638
subclass of: SO_0000673
so part of: LOC109577638
location: join(10593588..10593822,10633654..10633954,10636679..10636973,10645366..10645485,10648357..10648521,10650623..10650804,10651545..10651940)
location: region:10593588-10651940:1
so has part: feature:10593588-10593822:1:exon
so has part: feature:10633654-10633954:1:exon
so has part: feature:10636679-10636973:1:exon
so has part: feature:10645366-10645485:1:exon
so has part: feature:10648357-10648521:1:exon
so has part: feature:10650623-10650804:1:exon
so has part: feature:10651545-10651940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10593588-10593822:1:exon

position:10593822:1
position: 10593822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10633654-10633954:1:exon

position:10633654:1
position: 10633654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10633954:1
position: 10633954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10636679-10636973:1:exon

position:10636679:1
position: 10636679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10636973:1
position: 10636973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10645366-10645485:1:exon

position:10645366:1
position: 10645366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10645485:1
position: 10645485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10648357-10648521:1:exon

position:10648357:1
position: 10648357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10648521:1
position: 10648521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10650623-10650804:1:exon

position:10650623:1
position: 10650623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10650804:1
position: 10650804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10651545-10651940:1:exon

position:10651545:1
position: 10651545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109577638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-19-like
translation: MNCWLLLPFMLGIPLLWPCIIAAENSKTEEVRHPAGSHLRIRRGWMWNQFFVPEEMNKTRHHIGQLRSDLDNGNNSFQYKLLGVGAESLFVIDERTGDIYAVQKLDREERSLYTLRAQVIDTTTGRAVEPESEFVIRVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTASDADDPSSGNNARLVYSLLQGQPYFSIEPTTGKIRISSKMDRELQDEYWVIIQAKDMIGLPGALSGTTSVLIKLSDVNDNKPIFKDSLYRLTVSESAPVGTSIGKIMAYDRDIGENAEMDYSIEDBSRTFDVITNNETQEGIIILKKKVNFEDQNHYRIXAKVKNPQVDAHLREYHTEASTTVIKIQVEDVDEPPVFLLPYYIFEIFEECPHGSSVGTVSATDPDQRKSPIGYVWKPSFALINEGTQISLKIKFFKSGTKIYPDLYFSLWSLIKFAKV
SIO_010081: LOC109577638
subclass of: SO_0000673
so part of: LOC109577638
location: join(10633760..10633954,10636679..10636973,10645366..10645485,10648357..10648521,10650623..10650804,10651545..10651940)
location: region:10633760-10651940:1
so has part: feature:10633760-10633954:1:exon
so has part: feature:10636679-10636973:1:exon
so has part: feature:10645366-10645485:1:exon
so has part: feature:10648357-10648521:1:exon
so has part: feature:10650623-10650804:1:exon
so has part: feature:10651545-10651940:1:exon

XP_019841968.1
type: Protein
SIO_000068: ncbiprotein

position:10633760:1
position: 10633760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10633760-10633954:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10636679-10636973:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10645366-10645485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10648357-10648521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10650623-10650804:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10651545-10651940:1:exon

LOC109577639
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577639
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10782699..10796356
location: region:10782699-10796356:1
so has part: feature:10782699-10796356:1:exon
subclass of: SO_0000010

109577639
type: Gene
SIO_000068: ncbigene

position:10782699:1
position: 10782699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10796356:1
position: 10796356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10782699-10796356:1:exon

LOC109577639
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577639
product: cadherin-19-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019986410.1
SIO_010081: LOC109577639
subclass of: SO_0000673
so part of: LOC109577639
location: join(10782699..10782878,10788939..10789053,10791495..10791746,10794806..10796356)
location: region:10782699-10796356:1
so has part: feature:10782699-10782878:1:exon
so has part: feature:10788939-10789053:1:exon
so has part: feature:10791495-10791746:1:exon
so has part: feature:10794806-10796356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10782699-10782878:1:exon

position:10782878:1
position: 10782878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10788939-10789053:1:exon

position:10788939:1
position: 10788939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10789053:1
position: 10789053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10791495-10791746:1:exon

position:10791495:1
position: 10791495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10791746:1
position: 10791746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10794806-10796356:1:exon

position:10794806:1
position: 10794806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109577639
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577639
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-19-like
translation: MLPLTXALFFIFILFTQFADNIAQISSVPVYVQVLNINDHAPEFSEYYETYVCENAVSGQVIQTISAVDRDESIEHHHFYFNLSMEENNSSFAIIDNQDNTAVILTNRTGFSLQEEPVFYIAILIADNGIPSLTSTNTLTVHVCDCGDADSTQTCSHKDFMLSMGFKAEVITAILICIMIIFGFIFLNLGLKQRRKQTLFPEKSEEFRENIFRYDDEGGGEADTEAFDIAQLRGSAVMRGRKPRRPARAEMRSLYRQSLQVGPDSAVFRKFILEKLEEADTDPCAPPFDSLQTYAFEGTGSSAGSLSSLDSAVSDHDENYDYLNELGPRFKRLAYMFGSXMQSKN
SIO_010081: LOC109577639
subclass of: SO_0000673
so part of: LOC109577639
location: join(10782699..10782878,10788939..10789053,10791495..10791746,10794806..10795296)
location: region:10782699-10795296:1
so has part: feature:10782699-10782878:1:exon
so has part: feature:10788939-10789053:1:exon
so has part: feature:10791495-10791746:1:exon
so has part: feature:10794806-10795296:1:exon

XP_019841969.1
type: Protein
SIO_000068: ncbiprotein

position:10795296:1
position: 10795296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10782699-10782878:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10788939-10789053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10791495-10791746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10794806-10795296:1:exon

CDH7
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CDH7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11362255..11510211)
location: region:11362255-11510211:-1
so has part: feature:11362255-11510211:-1:exon
subclass of: SO_0000010

109578013
type: Gene
SIO_000068: ncbigene

position:11362255:-1
position: 11362255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11510211:-1
position: 11510211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11362255-11510211:-1:exon

CDH7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CDH7
product: cadherin 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 37 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019987011.1
SIO_010081: CDH7
subclass of: SO_0000673
so part of: CDH7
location: complement(join(11362255..11364956,11378518..11378769,11381803..11381920,11382857..11382978,11385441..11385577,11401390..11401643,11426086..11426273,11428622..11428789,11436493..11436612,11441020..11441314,11495992..11496398,11510131..11510211))
location: region:11362255-11510211:-1
so has part: feature:11510131-11510211:-1:exon
so has part: feature:11495992-11496398:-1:exon
so has part: feature:11441020-11441314:-1:exon
so has part: feature:11436493-11436612:-1:exon
so has part: feature:11428622-11428789:-1:exon
so has part: feature:11426086-11426273:-1:exon
so has part: feature:11401390-11401643:-1:exon
so has part: feature:11385441-11385577:-1:exon
so has part: feature:11382857-11382978:-1:exon
so has part: feature:11381803-11381920:-1:exon
so has part: feature:11378518-11378769:-1:exon
so has part: feature:11362255-11364956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11510131-11510211:-1:exon

position:11510131:-1
position: 11510131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11495992-11496398:-1:exon

position:11495992:-1
position: 11495992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11496398:-1
position: 11496398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11441020-11441314:-1:exon

position:11441020:-1
position: 11441020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11441314:-1
position: 11441314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11436493-11436612:-1:exon

position:11436493:-1
position: 11436493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11436612:-1
position: 11436612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11428622-11428789:-1:exon

position:11428622:-1
position: 11428622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11428789:-1
position: 11428789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11426086-11426273:-1:exon

position:11426086:-1
position: 11426086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11426273:-1
position: 11426273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11401390-11401643:-1:exon

position:11401390:-1
position: 11401390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11401643:-1
position: 11401643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11385441-11385577:-1:exon

position:11385441:-1
position: 11385441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11385577:-1
position: 11385577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11382857-11382978:-1:exon

position:11382857:-1
position: 11382857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11382978:-1
position: 11382978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11381803-11381920:-1:exon

position:11381803:-1
position: 11381803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11381920:-1
position: 11381920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11378518-11378769:-1:exon

position:11378518:-1
position: 11378518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11378769:-1
position: 11378769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11362255-11364956:-1:exon

position:11364956:-1
position: 11364956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CDH7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-7
translation: MKLGKVEFCHFLQLISLFLCFSGMSQAELSRSGSKPYFQSGRSRTKRSWVWNQFFVLEEYMGSDPLYVGKLHSDVDKGDGSIKYILSGEGASSIFIIDENTGDIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFSVEPKTGVIKTALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQYNVPESLPVASVVARIKAADADIGANAEMDYKIVDGDGLGIFKIAVDKDTQEGIITIQKDLDFEAKTSYTLRIEAANXDADPRFLSLGPFSDTTTVKIIVEDVDEPPVFSAXLYPMEVSEATQVGNIIGTVAAHDPDSSNSPVRYSIDRNTDLERYFNIDANSGVITTAKSLDRETNAVHNITVLAMESQNPSQVGRGYVAITILDINDNAPEFAMDYETTVCENAQPGQVIQKVSAVDKDEPANGHQFYFSLTTDATNNHNFSLKDNKDNTASILTRRNGFRRQEQSVYYLPIFIVDSGSPSLSSTNTLTIRVCDCDADGVAQTCNAEAYVLPAGLSTGALIAILACVLTLLVLILLIVTMRRRKKEPLIFDEERDIRENIVRYDDEGGGEEDTEAFDMAALRNLNVMRDTKTRRDVTPEIQFLSRPTFKSIPDNVIFREFIWERLKEADVDPCAPPYDSLQTYAFEGNGSVAESLSSLDSISSNSDQNYDYLSDWGPRFKRLADMYGNGQESLYS
SIO_010081: CDH7
subclass of: SO_0000673
so part of: CDH7
location: complement(join(11364463..11364956,11378518..11378769,11381803..11381920,11382857..11382978,11385441..11385577,11401390..11401643,11426086..11426273,11428622..11428789,11436493..11436612,11441020..11441314,11495992..11496201))
location: region:11364463-11496201:-1
so has part: feature:11495992-11496201:-1:exon
so has part: feature:11441020-11441314:-1:exon
so has part: feature:11436493-11436612:-1:exon
so has part: feature:11428622-11428789:-1:exon
so has part: feature:11426086-11426273:-1:exon
so has part: feature:11401390-11401643:-1:exon
so has part: feature:11385441-11385577:-1:exon
so has part: feature:11382857-11382978:-1:exon
so has part: feature:11381803-11381920:-1:exon
so has part: feature:11378518-11378769:-1:exon
so has part: feature:11364463-11364956:-1:exon

XP_019842570.1
type: Protein
SIO_000068: ncbiprotein

position:11364463:-1
position: 11364463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11496201:-1
position: 11496201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11495992-11496201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11441020-11441314:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11436493-11436612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11428622-11428789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11426086-11426273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11401390-11401643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11385441-11385577:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11382857-11382978:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11381803-11381920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11378518-11378769:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11364463-11364956:-1:exon

LOC109577978
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12998662..13020801)
location: region:12998662-13020801:-1
so has part: feature:12998662-13020801:-1:exon
subclass of: SO_0000010

109577978
type: Gene
SIO_000068: ncbigene

position:12998662:-1
position: 12998662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13020801:-1
position: 13020801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12998662-13020801:-1:exon

LOC109577978
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577978
product: serpin B8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_019986980.1
SIO_010081: LOC109577978
subclass of: SO_0000673
so part of: LOC109577978
location: complement(join(12998662..12999188,13002445..13002597,13004175..13004317,13004909..13005026,13005689..13005774,13007349..13007486,13011495..13011672,13020526..13020801))
location: region:12998662-13020801:-1
so has part: feature:13020526-13020801:-1:exon
so has part: feature:13011495-13011672:-1:exon
so has part: feature:13007349-13007486:-1:exon
so has part: feature:13005689-13005774:-1:exon
so has part: feature:13004909-13005026:-1:exon
so has part: feature:13004175-13004317:-1:exon
so has part: feature:13002445-13002597:-1:exon
so has part: feature:12998662-12999188:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13020526-13020801:-1:exon

position:13020526:-1
position: 13020526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13011495-13011672:-1:exon

position:13011495:-1
position: 13011495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13011672:-1
position: 13011672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13007349-13007486:-1:exon

position:13007349:-1
position: 13007349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13007486:-1
position: 13007486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13005689-13005774:-1:exon

position:13005689:-1
position: 13005689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13005774:-1
position: 13005774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13004909-13005026:-1:exon

position:13004909:-1
position: 13004909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13005026:-1
position: 13005026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13004175-13004317:-1:exon

position:13004175:-1
position: 13004175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13004317:-1
position: 13004317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13002445-13002597:-1:exon

position:13002445:-1
position: 13002445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13002597:-1
position: 13002597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12998662-12999188:-1:exon

position:12999188:-1
position: 12999188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109577978
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577978
product: serpin B8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_019986979.1
SIO_010081: LOC109577978
subclass of: SO_0000673
so part of: LOC109577978
location: complement(join(12998662..12999188,13002445..13002597,13004175..13004317,13004909..13005026,13007349..13007486,13011495..13011672,13020526..13020800))
location: region:12998662-13020800:-1
so has part: feature:13020526-13020800:-1:exon
so has part: feature:13011495-13011672:-1:exon
so has part: feature:13007349-13007486:-1:exon
so has part: feature:13004909-13005026:-1:exon
so has part: feature:13004175-13004317:-1:exon
so has part: feature:13002445-13002597:-1:exon
so has part: feature:12998662-12999188:-1:exon

position:13020800:-1
position: 13020800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13020526-13020800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13011495-13011672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13007349-13007486:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13004909-13005026:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13004175-13004317:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13002445-13002597:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12998662-12999188:-1:exon

LOC109577978
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serpin B8 isoform X1
translation: MDALCEANGTFAINLLKMLGEEDHLXNVFFSPLSLSSVLTMVLMGAKGNTAAQMSQALCLNESGDVHRGFQSLLREVSTSGPKCLLRTANRLFGEKTCDFLPAFKESCQKFYQADLEELSFAEDTEECRKHINDWVMEKTDGKISEILGAGTVSPLTKLVLVNAIYFKGKWNEQFDRKHTRGMPFKTNQEKKTVQMMFKQAKFKMGHVEEVPAQVLELPYVGAELSMLILLPDENTDLAVVEKALTYEKFRTWTSPEKLTEEKVQVFLPRLKLEASYDLEAFLRSLGMTDAFEEAKADFSGMSAKKNVPMSKVAHKCFVEVNEEGTEAAGATAVVRNSRCCRMEPKFCADHPFLFFIRHRETNSILFCGRFSSP
SIO_010081: LOC109577978
subclass of: SO_0000673
so part of: LOC109577978
location: complement(join(12998784..12999188,13002445..13002597,13004175..13004317,13004909..13005026,13007349..13007486,13011495..13011662))
location: region:12998784-13011662:-1
so has part: feature:13011495-13011662:-1:exon
so has part: feature:13007349-13007486:-1:exon
so has part: feature:13004909-13005026:-1:exon
so has part: feature:13004175-13004317:-1:exon
so has part: feature:13002445-13002597:-1:exon
so has part: feature:12998784-12999188:-1:exon

XP_019842538.1
type: Protein
SIO_000068: ncbiprotein

position:12998784:-1
position: 12998784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13011662:-1
position: 13011662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13011495-13011662:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13007349-13007486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13004909-13005026:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13004175-13004317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13002445-13002597:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12998784-12999188:-1:exon

LOC109577978
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serpin B8 isoform X2
translation: MFEDRRWAEDGSQLPGTLYQKTSFCEAFKESCQKFYQADLEELSFAEDTEECRKHINDWVMEKTDGKISEILGAGTVSPLTKLVLVNAIYFKGKWNEQFDRKHTRGMPFKTNQEKKTVQMMFKQAKFKMGHVEEVPAQVLELPYVGAELSMLILLPDENTDLAVVEKALTYEKFRTWTSPEKLTEEKVQVFLPRLKLEASYDLEAFLRSLGMTDAFEEAKADFSGMSAKKNVPMSKVAHKCFVEVNEEGTEAAGATAVVRNSRCCRMEPKFCADHPFLFFIRHRETNSILFCGRFSSP
SIO_010081: LOC109577978
subclass of: SO_0000673
so part of: LOC109577978
location: complement(join(12998784..12999188,13002445..13002597,13004175..13004317,13004909..13005026,13005689..13005766))
location: region:12998784-13005766:-1
so has part: feature:13005689-13005766:-1:exon
so has part: feature:13004909-13005026:-1:exon
so has part: feature:13004175-13004317:-1:exon
so has part: feature:13002445-13002597:-1:exon
so has part: feature:12998784-12999188:-1:exon

XP_019842539.1
type: Protein
SIO_000068: ncbiprotein

position:13005766:-1
position: 13005766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13005689-13005766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13004909-13005026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13004175-13004317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13002445-13002597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12998784-12999188:-1:exon

TRNAK-UUU
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TRNAK-UUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(13017271..13017343)
location: region:13017271-13017343:-1
so has part: feature:13017271-13017343:-1:exon
subclass of: SO_0000663

109578030
type: Gene
SIO_000068: ncbigene

position:13017271:-1
position: 13017271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13017343:-1
position: 13017343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13017271-13017343:-1:exon

TRNAK-UUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9915
gene: TRNAK-UUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon UUU); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(13017308..13017310),aa:Lys, seq:ttt)
SIO_010081: TRNAK-UUU
subclass of: SO_0000673
so part of: TRNAK-UUU
location: complement(13017271..13017343)
location: region:13017271-13017343:-1
so has part: feature:13017271-13017343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13017271-13017343:-1:exon

LOC109577640
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(13023229..13037569)
location: region:13023229-13037569:-1
so has part: feature:13023229-13037569:-1:exon

109577640
type: Gene
SIO_000068: ncbigene

position:13023229:-1
position: 13023229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13037569:-1
position: 13037569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13023229-13037569:-1:exon

LOC109577640
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109577640
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC109577640
subclass of: SO_0000673
so part of: LOC109577640
location: complement(13023229..13023632)
location: region:13023229-13023632:-1
so has part: feature:13023229-13023632:-1:exon

position:13023632:-1
position: 13023632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13023229-13023632:-1:exon

LOC109577640
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109577640
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC109577640
subclass of: SO_0000673
so part of: LOC109577640
location: complement(13025576..13025731)
location: region:13025576-13025731:-1
so has part: feature:13025576-13025731:-1:exon

position:13025576:-1
position: 13025576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13025731:-1
position: 13025731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13025576-13025731:-1:exon

LOC109577640
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109577640
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC109577640
subclass of: SO_0000673
so part of: LOC109577640
location: complement(13029447..13029589)
location: region:13029447-13029589:-1
so has part: feature:13029447-13029589:-1:exon

position:13029447:-1
position: 13029447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13029589:-1
position: 13029589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13029447-13029589:-1:exon

LOC109577640
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109577640
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC109577640
subclass of: SO_0000673
so part of: LOC109577640
location: complement(13037518..13037569)
location: region:13037518-13037569:-1
so has part: feature:13037518-13037569:-1:exon

position:13037518:-1
position: 13037518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13037518-13037569:-1:exon

LOC109577977
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13052518..13069877)
location: region:13052518-13069877:-1
so has part: feature:13052518-13069877:-1:exon
subclass of: SO_0000010

109577977
type: Gene
SIO_000068: ncbigene

position:13052518:-1
position: 13052518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13069877:-1
position: 13069877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13052518-13069877:-1:exon

LOC109577977
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577977
product: plasminogen activator inhibitor 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 5 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019986978.1
SIO_010081: LOC109577977
subclass of: SO_0000673
so part of: LOC109577977
location: complement(join(13052518..13053719,13054259..13054423,13055110..13055252,13058262..13058379,13059020..13059148,13060794..13060913,13065177..13065356,13069825..13069877))
location: region:13052518-13069877:-1
so has part: feature:13069825-13069877:-1:exon
so has part: feature:13065177-13065356:-1:exon
so has part: feature:13060794-13060913:-1:exon
so has part: feature:13059020-13059148:-1:exon
so has part: feature:13058262-13058379:-1:exon
so has part: feature:13055110-13055252:-1:exon
so has part: feature:13054259-13054423:-1:exon
so has part: feature:13052518-13053719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13069825-13069877:-1:exon

position:13069825:-1
position: 13069825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13065177-13065356:-1:exon

position:13065177:-1
position: 13065177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13065356:-1
position: 13065356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13060794-13060913:-1:exon

position:13060794:-1
position: 13060794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13060913:-1
position: 13060913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13059020-13059148:-1:exon

position:13059020:-1
position: 13059020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13059148:-1
position: 13059148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13058262-13058379:-1:exon

position:13058262:-1
position: 13058262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13058379:-1
position: 13058379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13055110-13055252:-1:exon

position:13055110:-1
position: 13055110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13055252:-1
position: 13055252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13054259-13054423:-1:exon

position:13054259:-1
position: 13054259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13054423:-1
position: 13054423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13052518-13053719:-1:exon

position:13053719:-1
position: 13053719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109577977
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasminogen activator inhibitor 2-like
translation: MEELNVANTIFALNFFKHLANTSANTQNIFFCPWSISSTVAMVYLGARGNTADQIAQVLQFNQVGVHKGTPVTPQSLTSCDFTQQIQRDTXPDAILQAQAAGKIHSSFHSLSNAINASTGEYLLESANMLFGEKSARFKEEYMQLSKKYYSTEPQAVDFLERAEDTRKKINSWVKTQTKGKIPNLLPEGSVDVDTKMVLVNAVYFKGRWKTPFQKKLKGLYPFRVNSTQRKSVEMMFLNEKLNIGYIADLKVQILELPYAGBVSMFLLLPDGIAESSTGLEMLESEITYDKLNKWLSKDTMAEDDVVVYIPEFKLEEXYELKTILTSMGMGDAFSQGRANFSGMSGKNDLFLSEVFHQASVEVNEEGTEAAAGTGAIMTGRTGHGGPQFVADHPFLFFIMHKITKSILFWGRFASP
SIO_010081: LOC109577977
subclass of: SO_0000673
so part of: LOC109577977
location: complement(join(13053315..13053719,13054259..13054423,13055110..13055252,13058262..13058379,13059020..13059148,13060794..13060913,13065177..13065347))
location: region:13053315-13065347:-1
so has part: feature:13065177-13065347:-1:exon
so has part: feature:13060794-13060913:-1:exon
so has part: feature:13059020-13059148:-1:exon
so has part: feature:13058262-13058379:-1:exon
so has part: feature:13055110-13055252:-1:exon
so has part: feature:13054259-13054423:-1:exon
so has part: feature:13053315-13053719:-1:exon

XP_019842537.1
type: Protein
SIO_000068: ncbiprotein

position:13053315:-1
position: 13053315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13065347:-1
position: 13065347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13065177-13065347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13060794-13060913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13059020-13059148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13058262-13058379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13055110-13055252:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13054259-13054423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13053315-13053719:-1:exon

LOC109577650
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(13102970..13103389)
location: region:13102970-13103389:-1
so has part: feature:13102970-13103389:-1:exon

109577650
type: Gene
SIO_000068: ncbigene

position:13102970:-1
position: 13102970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13103389:-1
position: 13103389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13102970-13103389:-1:exon

LOC109577650
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109577650
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109577650
subclass of: SO_0000673
so part of: LOC109577650
location: complement(13102970..13103389)
location: region:13102970-13103389:-1
so has part: feature:13102970-13103389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13102970-13103389:-1:exon

LOC109578007
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109578007
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13117279..13125392
location: region:13117279-13125392:1
so has part: feature:13117279-13125392:1:exon
subclass of: SO_0000010

109578007
type: Gene
SIO_000068: ncbigene

position:13117279:1
position: 13117279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13125392:1
position: 13125392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13117279-13125392:1:exon

LOC109578007
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109578007
product: uncharacterized LOC109578007
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019987004.1
SIO_010081: LOC109578007
subclass of: SO_0000673
so part of: LOC109578007
location: join(13117279..13117368,13123189..13125392)
location: region:13117279-13125392:1
so has part: feature:13117279-13117368:1:exon
so has part: feature:13123189-13125392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13117279-13117368:1:exon

position:13117368:1
position: 13117368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13123189-13125392:1:exon

position:13123189:1
position: 13123189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109578007
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109578007
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109578007
translation: MSQPLGYRVPRPPRPRKRKGPPLPSLPPPARETPLTSEQLTSGIPDEQGTDPPTKQMSQLHIQDIAPPDPLPHKRRSGRLTQATRNASIPTWGQIKTLCHQARGITSLQGSPTSPEKMFIAMLALLSCQVSASSPTPEKYWAYFPDPPTFQVVTWNSDPLRVHTNQPQLLGGSYTSYTTDEYPINFNFTFRGLADDLPVCFNFPSDIESFIIPPKEGCVGASKKAVLTHSPASGIEHRGRLALWILQARMPGALDPHELIIHRPAPGYPSCYNTEPSDAIWNTIDDRTGYPIWKSCTYRLRADYRIPGGGNYMIQDWSNSDLDRSPLPLDDFPSRFYNWKKDLVSWPLSITRWHNNRFVSPILSYTTKNRTSWQPEIWRALAATAPISLFRPNSNSTYSVLACVPSPYVFLFTNDSKRLNVHMNYSGGPNIVTCEQCMLPSCLTPQYNVCSFVVLKRPPYLMIPVSVHSYWYDNYGLAVLQQLQDLMRTRRFVGLLILGIAALISAITSVTVAAISLTQQVHTAQYVDSMSKNVSLALATQEAIDRKLEMRVDALEEAVIHIGTELQALKVKMALSCHADYRWICVTPLKVNETDFEWEKIKNHISGIWNSSDISLDLGKLHNQIATLEHSRLDFTAAGTANDFFHTFSNYISGKNILSTFLGYATLAVLILFLIIILPCIVRILRQSIQRLATELHLAVLRNKKGGDAGSR
SIO_010081: LOC109578007
subclass of: SO_0000673
so part of: LOC109578007
location: 13123232..13125370
location: region:13123232-13125370:1
so has part: feature:13123232-13125370:1:exon

XP_019842563.1
type: Protein
SIO_000068: ncbiprotein

position:13123232:1
position: 13123232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13125370:1
position: 13125370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13123232-13125370:1:exon

SYT4
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: SYT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13255742..13265587
location: region:13255742-13265587:1
so has part: feature:13255742-13265587:1:exon
subclass of: SO_0000010

109577969
type: Gene
SIO_000068: ncbigene

position:13255742:1
position: 13255742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13265587:1
position: 13265587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13255742-13265587:1:exon

SYT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SYT4
product: synaptotagmin 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 95 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_019986966.1
SIO_010081: SYT4
subclass of: SO_0000673
so part of: SYT4
location: join(13255742..13256042,13258817..13259631,13261265..13261385,13262898..13265587)
location: region:13255742-13265587:1
so has part: feature:13255742-13256042:1:exon
so has part: feature:13258817-13259631:1:exon
so has part: feature:13261265-13261385:1:exon
so has part: feature:13262898-13265587:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13255742-13256042:1:exon

position:13256042:1
position: 13256042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13258817-13259631:1:exon

position:13258817:1
position: 13258817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13259631:1
position: 13259631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13261265-13261385:1:exon

position:13261265:1
position: 13261265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13261385:1
position: 13261385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13262898-13265587:1:exon

position:13262898:1
position: 13262898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SYT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-4
translation: MAPISTSREEFDEIPTVVGIFSAFGLVFTVSLFAWICCQRKSSKPSKTPPYKFVHVLKGVDIYPESLDSKKKFGADEKNEVKNKSAVPKNSLHLDLEKRDLNGNFPKTNFKAGSSSDLESVTPKLSSEGGKEAVSPDSLKSSTSLTSDEKQEKLGTLFFSLEYNFEKKAFVVNIKEARGLPAMDDQSMTSDPYIKMMILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTVLSFDRFSRDDVIGEVLIPLAGIELTNGEMLMNREITKRNVRKSSGRGELLISLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCEGLEEISVEFLVLDSERGSRNEVIGRLVLGAAAEGAGGEHWKEICDYPRRQIAKWHALCDG
SIO_010081: SYT4
subclass of: SO_0000673
so part of: SYT4
location: join(13256009..13256042,13258817..13259631,13261265..13261385,13262898..13263205)
location: region:13256009-13263205:1
so has part: feature:13256009-13256042:1:exon
so has part: feature:13258817-13259631:1:exon
so has part: feature:13261265-13261385:1:exon
so has part: feature:13262898-13263205:1:exon

XP_019842525.1
type: Protein
SIO_000068: ncbiprotein

position:13256009:1
position: 13256009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13263205:1
position: 13263205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13256009-13256042:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13258817-13259631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13261265-13261385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13262898-13263205:1:exon

LOC109577641
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(13408494..13442056)
location: region:13408494-13442056:-1
so has part: feature:13408494-13442056:-1:exon

109577641
type: Gene
SIO_000068: ncbigene

position:13408494:-1
position: 13408494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13442056:-1
position: 13442056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13408494-13442056:-1:exon

LOC109577641
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: LOC109577641
product: 60S ribosomal protein L6 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 609 ESTs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_002183559.1
SIO_010081: LOC109577641
so part of: LOC109577641
location: complement(join(13408494..13408513,13441238..13442056))
location: region:13408494-13442056:-1
so has part: feature:13441238-13442056:-1:exon
so has part: feature:13408494-13408513:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13441238-13442056:-1:exon

position:13441238:-1
position: 13441238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13408494-13408513:-1:exon

position:13408513:-1
position: 13408513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109577649
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577649
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(14003795..14004769)
location: region:14003795-14004769:-1
so has part: feature:14003795-14004769:-1:exon

109577649
type: Gene
SIO_000068: ncbigene

position:14003795:-1
position: 14003795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14004769:-1
position: 14004769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14003795-14004769:-1:exon

LOC109577649
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: LOC109577649
product: RWD domain-containing protein 1 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_002183560.1
SIO_010081: LOC109577649
so part of: LOC109577649
location: complement(14003795..14004769)
location: region:14003795-14004769:-1
so has part: feature:14003795-14004769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14003795-14004769:-1:exon

PIK3C3
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PIK3C3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(14594964..14765135)
location: region:14594964-14765135:-1
so has part: feature:14594964-14765135:-1:exon
subclass of: SO_0000010

109577642
type: Gene
SIO_000068: ncbigene

position:14594964:-1
position: 14594964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14765135:-1
position: 14765135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14594964-14765135:-1:exon

PIK3C3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PIK3C3
product: phosphatidylinositol 3-kinase catalytic subunit type 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986412.1
SIO_010081: PIK3C3
subclass of: SO_0000673
so part of: PIK3C3
location: complement(join(14594964..14596610,14602244..14602369,14606678..14606768,14612988..14613156,14633764..14633838,14646881..14646965,14649719..14649783,14655478..14655547,14656099..14656227,14658640..14658771,14663395..14663511,14665001..14665106,14698054..14698149,14700854..14700984,14702114..14702218,14705480..14705551,14708163..14708258,14710359..14710445,14742941..14743070,14756440..14756583,14761890..14762078,14764967..14765135))
location: region:14594964-14765135:-1
so has part: feature:14764967-14765135:-1:exon
so has part: feature:14761890-14762078:-1:exon
so has part: feature:14756440-14756583:-1:exon
so has part: feature:14742941-14743070:-1:exon
so has part: feature:14710359-14710445:-1:exon
so has part: feature:14708163-14708258:-1:exon
so has part: feature:14705480-14705551:-1:exon
so has part: feature:14702114-14702218:-1:exon
so has part: feature:14700854-14700984:-1:exon
so has part: feature:14698054-14698149:-1:exon
so has part: feature:14665001-14665106:-1:exon
so has part: feature:14663395-14663511:-1:exon
so has part: feature:14658640-14658771:-1:exon
so has part: feature:14656099-14656227:-1:exon
so has part: feature:14655478-14655547:-1:exon
so has part: feature:14649719-14649783:-1:exon
so has part: feature:14646881-14646965:-1:exon
so has part: feature:14633764-14633838:-1:exon
so has part: feature:14612988-14613156:-1:exon
so has part: feature:14606678-14606768:-1:exon
so has part: feature:14602244-14602369:-1:exon
so has part: feature:14594964-14596610:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14764967-14765135:-1:exon

position:14764967:-1
position: 14764967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14761890-14762078:-1:exon

position:14761890:-1
position: 14761890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14762078:-1
position: 14762078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14756440-14756583:-1:exon

position:14756440:-1
position: 14756440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14756583:-1
position: 14756583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14742941-14743070:-1:exon

position:14742941:-1
position: 14742941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14743070:-1
position: 14743070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14710359-14710445:-1:exon

position:14710359:-1
position: 14710359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14710445:-1
position: 14710445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14708163-14708258:-1:exon

position:14708163:-1
position: 14708163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14708258:-1
position: 14708258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14705480-14705551:-1:exon

position:14705480:-1
position: 14705480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14705551:-1
position: 14705551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14702114-14702218:-1:exon

position:14702114:-1
position: 14702114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14702218:-1
position: 14702218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14700854-14700984:-1:exon

position:14700854:-1
position: 14700854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14700984:-1
position: 14700984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:14698054-14698149:-1:exon

position:14698054:-1
position: 14698054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14698149:-1
position: 14698149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:14665001-14665106:-1:exon

position:14665001:-1
position: 14665001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14665106:-1
position: 14665106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:14663395-14663511:-1:exon

position:14663395:-1
position: 14663395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14663511:-1
position: 14663511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:14658640-14658771:-1:exon

position:14658640:-1
position: 14658640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14658771:-1
position: 14658771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:14656099-14656227:-1:exon

position:14656099:-1
position: 14656099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14656227:-1
position: 14656227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:14655478-14655547:-1:exon

position:14655478:-1
position: 14655478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14655547:-1
position: 14655547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:14649719-14649783:-1:exon

position:14649719:-1
position: 14649719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14649783:-1
position: 14649783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:14646881-14646965:-1:exon

position:14646881:-1
position: 14646881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14646965:-1
position: 14646965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:14633764-14633838:-1:exon

position:14633764:-1
position: 14633764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14633838:-1
position: 14633838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:14612988-14613156:-1:exon

position:14612988:-1
position: 14612988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14613156:-1
position: 14613156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:14606678-14606768:-1:exon

position:14606678:-1
position: 14606678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14606768:-1
position: 14606768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:14602244-14602369:-1:exon

position:14602244:-1
position: 14602244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14602369:-1
position: 14602369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:14594964-14596610:-1:exon

position:14596610:-1
position: 14596610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIK3C3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PIK3C3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3-kinase catalytic subunit type 3
translation: MGEAEKFHYVYSCDLDINVQLKIGSLEGKREQKSYKAVLEDPMLKFSGLYQETCSDLYVTCQVFAEGKPLALPVRTSYKAFSTRWNWNEWLKLPVKYPDLPRNAQVALTIWDVYGPGKAVPVGGTTVSLFGKYGMFRQGMHDLKVWPNVEADGSEPTKTPGRTSSTLSEDQMSRLAKLTKAHRQGHMVKVDWLDRLTFREIEMINESEKRSSNFMYLMVEFRCVKCDDKEYGIVYYEKDGDESSPILTSFEIVKVPDPQMSMENLVESKHHKLARSLRSGPSDHDLKPNAATRDQLNIIVSYPPTKQLTYEEQDLVWKFRYYLTNQEKVSFSNIFTYQIYLEQNSRNSHMVKVMVMHTDRTDEAASETVTSGRYVIVECEDQDTQQRDPKTHEMYLNVMRRFSQALLKGDKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLTKTGKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALFAAVVEQIHKFAQYWRK
SIO_010081: PIK3C3
subclass of: SO_0000673
so part of: PIK3C3
location: complement(join(14596596..14596610,14602244..14602369,14606678..14606768,14612988..14613156,14633764..14633838,14646881..14646965,14649719..14649783,14655478..14655547,14656099..14656227,14658640..14658771,14663395..14663511,14665001..14665106,14698054..14698149,14700854..14700984,14702114..14702218,14705480..14705551,14708163..14708258,14710359..14710445,14742941..14743070,14756440..14756583,14761890..14762078,14764967..14765034))
location: region:14596596-14765034:-1
so has part: feature:14764967-14765034:-1:exon
so has part: feature:14761890-14762078:-1:exon
so has part: feature:14756440-14756583:-1:exon
so has part: feature:14742941-14743070:-1:exon
so has part: feature:14710359-14710445:-1:exon
so has part: feature:14708163-14708258:-1:exon
so has part: feature:14705480-14705551:-1:exon
so has part: feature:14702114-14702218:-1:exon
so has part: feature:14700854-14700984:-1:exon
so has part: feature:14698054-14698149:-1:exon
so has part: feature:14665001-14665106:-1:exon
so has part: feature:14663395-14663511:-1:exon
so has part: feature:14658640-14658771:-1:exon
so has part: feature:14656099-14656227:-1:exon
so has part: feature:14655478-14655547:-1:exon
so has part: feature:14649719-14649783:-1:exon
so has part: feature:14646881-14646965:-1:exon
so has part: feature:14633764-14633838:-1:exon
so has part: feature:14612988-14613156:-1:exon
so has part: feature:14606678-14606768:-1:exon
so has part: feature:14602244-14602369:-1:exon
so has part: feature:14596596-14596610:-1:exon

XP_019841971.1
type: Protein
SIO_000068: ncbiprotein

position:14596596:-1
position: 14596596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14765034:-1
position: 14765034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14764967-14765034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14761890-14762078:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14756440-14756583:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14742941-14743070:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14710359-14710445:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14708163-14708258:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14705480-14705551:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14702114-14702218:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14700854-14700984:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14698054-14698149:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14665001-14665106:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14663395-14663511:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14658640-14658771:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14656099-14656227:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14655478-14655547:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14649719-14649783:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:14646881-14646965:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14633764-14633838:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:14612988-14613156:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:14606678-14606768:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14602244-14602369:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14596596-14596610:-1:exon

LOC109577643
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(15763636..15764664)
location: region:15763636-15764664:-1
so has part: feature:15763636-15764664:-1:exon

109577643
type: Gene
SIO_000068: ncbigene

position:15763636:-1
position: 15763636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15764664:-1
position: 15764664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15763636-15764664:-1:exon

LOC109577643
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109577643
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC109577643
subclass of: SO_0000673
so part of: LOC109577643
location: complement(15763636..15764664)
location: region:15763636-15764664:-1
so has part: feature:15763636-15764664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15763636-15764664:-1:exon

LOC109577644
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 15897053..15898509
location: region:15897053-15898509:1
so has part: feature:15897053-15898509:1:exon

109577644
type: Gene
SIO_000068: ncbigene

position:15897053:1
position: 15897053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15898509:1
position: 15898509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15897053-15898509:1:exon

LOC109577644
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109577644
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109577644
subclass of: SO_0000673
so part of: LOC109577644
location: 15897053..15897098
location: region:15897053-15897098:1
so has part: feature:15897053-15897098:1:exon

position:15897098:1
position: 15897098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15897053-15897098:1:exon

LOC109577644
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109577644
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109577644
subclass of: SO_0000673
so part of: LOC109577644
location: 15897785..15898509
location: region:15897785-15898509:1
so has part: feature:15897785-15898509:1:exon

position:15897785:1
position: 15897785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15897785-15898509:1:exon

LOC109577976
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(18652432..18653694)
location: region:18652432-18653694:-1
so has part: feature:18652432-18653694:-1:exon

109577976
type: Gene
SIO_000068: ncbigene

position:18652432:-1
position: 18652432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18653694:-1
position: 18653694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18652432-18653694:-1:exon

LOC109577976
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: LOC109577976
product: splicing factor 45 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 7 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_002183633.1
SIO_010081: LOC109577976
so part of: LOC109577976
location: complement(18652432..18653694)
location: region:18652432-18653694:-1
so has part: feature:18652432-18653694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18652432-18653694:-1:exon

LOC109577645
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577645
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 18688702..18689005
location: region:18688702-18689005:1
so has part: feature:18688702-18689005:1:exon

109577645
type: Gene
SIO_000068: ncbigene

position:18688702:1
position: 18688702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18689005:1
position: 18689005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18688702-18689005:1:exon

LOC109577645
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109577645
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109577645
subclass of: SO_0000673
so part of: LOC109577645
location: 18688702..18689005
location: region:18688702-18689005:1
so has part: feature:18688702-18689005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18688702-18689005:1:exon

LOC109577783
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 18754954..18766698
location: region:18754954-18766698:1
so has part: feature:18754954-18766698:1:exon
subclass of: SO_0000011

109577783
type: Gene
SIO_000068: ncbigene

position:18754954:1
position: 18754954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18766698:1
position: 18766698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18754954-18766698:1:exon

LOC109577783
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109577783
product: uncharacterized LOC109577783
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs
transcript id: XR_002183588.1
SIO_010081: LOC109577783
subclass of: SO_0000673
so part of: LOC109577783
location: join(18754954..18755147,18755710..18755828,18766481..18766698)
location: region:18754954-18766698:1
so has part: feature:18754954-18755147:1:exon
so has part: feature:18755710-18755828:1:exon
so has part: feature:18766481-18766698:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18754954-18755147:1:exon

position:18755147:1
position: 18755147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18755710-18755828:1:exon

position:18755710:1
position: 18755710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18755828:1
position: 18755828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18766481-18766698:1:exon

position:18766481:1
position: 18766481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CELF4
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 20555916..20923829
location: region:20555916-20923829:1
so has part: feature:20555916-20923829:1:exon
subclass of: SO_0000010

109578001
type: Gene
SIO_000068: ncbigene

position:20555916:1
position: 20555916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20923829:1
position: 20923829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20555916-20923829:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CELF4
product: CUGBP, Elav-like family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 26 ESTs, 3 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019987001.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(20555916..20556201,20717085..20717098,20719788..20719815,20724020..20724043,20732564..20732583,20848743..20848821,20893569..20893697,20894409..20894488,20894919..20895062,20895924..20896071,20897857..20898006,20902016..20902081,20903585..20903668,20908467..20908550,20913835..20914006,20922799..20923829)
location: region:20555916-20923829:1
so has part: feature:20555916-20556201:1:exon
so has part: feature:20717085-20717098:1:exon
so has part: feature:20719788-20719815:1:exon
so has part: feature:20724020-20724043:1:exon
so has part: feature:20732564-20732583:1:exon
so has part: feature:20848743-20848821:1:exon
so has part: feature:20893569-20893697:1:exon
so has part: feature:20894409-20894488:1:exon
so has part: feature:20894919-20895062:1:exon
so has part: feature:20895924-20896071:1:exon
so has part: feature:20897857-20898006:1:exon
so has part: feature:20902016-20902081:1:exon
so has part: feature:20903585-20903668:1:exon
so has part: feature:20908467-20908550:1:exon
so has part: feature:20913835-20914006:1:exon
so has part: feature:20922799-20923829:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20555916-20556201:1:exon

position:20556201:1
position: 20556201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:20717085-20717098:1:exon

position:20717085:1
position: 20717085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20717098:1
position: 20717098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:20719788-20719815:1:exon

position:20719788:1
position: 20719788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20719815:1
position: 20719815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:20724020-20724043:1:exon

position:20724020:1
position: 20724020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20724043:1
position: 20724043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:20732564-20732583:1:exon

position:20732564:1
position: 20732564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20732583:1
position: 20732583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:20848743-20848821:1:exon

position:20848743:1
position: 20848743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20848821:1
position: 20848821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:20893569-20893697:1:exon

position:20893569:1
position: 20893569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20893697:1
position: 20893697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:20894409-20894488:1:exon

position:20894409:1
position: 20894409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20894488:1
position: 20894488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:20894919-20895062:1:exon

position:20894919:1
position: 20894919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20895062:1
position: 20895062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:20895924-20896071:1:exon

position:20895924:1
position: 20895924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20896071:1
position: 20896071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:20897857-20898006:1:exon

position:20897857:1
position: 20897857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20898006:1
position: 20898006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:20902016-20902081:1:exon

position:20902016:1
position: 20902016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20902081:1
position: 20902081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:20903585-20903668:1:exon

position:20903585:1
position: 20903585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20903668:1
position: 20903668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:20908467-20908550:1:exon

position:20908467:1
position: 20908467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20908550:1
position: 20908550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:20913835-20914006:1:exon

position:20913835:1
position: 20913835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20914006:1
position: 20914006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:20922799-20923829:1:exon

position:20922799:1
position: 20922799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4
translation: MYIKMATLANGQADNASLSTSGLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTPCSKESRVKAWSAAVHERPTAPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(20555916..20556201,20717085..20717098,20719788..20719815,20724020..20724043,20732564..20732583,20848743..20848821,20893569..20893697,20894409..20894488,20894919..20895062,20895924..20896071,20897857..20898006,20902016..20902081,20903585..20903668,20908467..20908550,20913835..20913962)
location: region:20555916-20913962:1
so has part: feature:20555916-20556201:1:exon
so has part: feature:20717085-20717098:1:exon
so has part: feature:20719788-20719815:1:exon
so has part: feature:20724020-20724043:1:exon
so has part: feature:20732564-20732583:1:exon
so has part: feature:20848743-20848821:1:exon
so has part: feature:20893569-20893697:1:exon
so has part: feature:20894409-20894488:1:exon
so has part: feature:20894919-20895062:1:exon
so has part: feature:20895924-20896071:1:exon
so has part: feature:20897857-20898006:1:exon
so has part: feature:20902016-20902081:1:exon
so has part: feature:20903585-20903668:1:exon
so has part: feature:20908467-20908550:1:exon
so has part: feature:20913835-20913962:1:exon

XP_019842560.1
type: Protein
SIO_000068: ncbiprotein

position:20913962:1
position: 20913962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20555916-20556201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:20717085-20717098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20719788-20719815:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20724020-20724043:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20732564-20732583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20848743-20848821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20893569-20893697:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:20894409-20894488:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:20894919-20895062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:20895924-20896071:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:20897857-20898006:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:20902016-20902081:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:20903585-20903668:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:20908467-20908550:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:20913835-20913962:1:exon

KIAA1328
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: KIAA1328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(20948173..21367582)
location: region:20948173-21367582:-1
so has part: feature:20948173-21367582:-1:exon
subclass of: SO_0000010

109577922
type: Gene
SIO_000068: ncbigene

position:20948173:-1
position: 20948173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21367582:-1
position: 21367582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20948173-21367582:-1:exon

KIAA1328
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: KIAA1328
product: KIAA1328 ortholog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019986903.1
SIO_010081: KIAA1328
subclass of: SO_0000673
so part of: KIAA1328
location: complement(join(20948173..20951393,21012146..21012254,21039477..21039658,21101622..21101729,21107162..21107835,21209559..21209686,21305644..21305759,21350648..21350742,21359815..21359957,21360679..21360714,21367253..21367582))
location: region:20948173-21367582:-1
so has part: feature:21367253-21367582:-1:exon
so has part: feature:21360679-21360714:-1:exon
so has part: feature:21359815-21359957:-1:exon
so has part: feature:21350648-21350742:-1:exon
so has part: feature:21305644-21305759:-1:exon
so has part: feature:21209559-21209686:-1:exon
so has part: feature:21107162-21107835:-1:exon
so has part: feature:21101622-21101729:-1:exon
so has part: feature:21039477-21039658:-1:exon
so has part: feature:21012146-21012254:-1:exon
so has part: feature:20948173-20951393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21367253-21367582:-1:exon

position:21367253:-1
position: 21367253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21360679-21360714:-1:exon

position:21360679:-1
position: 21360679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21360714:-1
position: 21360714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:21359815-21359957:-1:exon

position:21359815:-1
position: 21359815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21359957:-1
position: 21359957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:21350648-21350742:-1:exon

position:21350648:-1
position: 21350648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21350742:-1
position: 21350742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:21305644-21305759:-1:exon

position:21305644:-1
position: 21305644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21305759:-1
position: 21305759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:21209559-21209686:-1:exon

position:21209559:-1
position: 21209559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21209686:-1
position: 21209686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:21107162-21107835:-1:exon

position:21107162:-1
position: 21107162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21107835:-1
position: 21107835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:21101622-21101729:-1:exon

position:21101622:-1
position: 21101622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21101729:-1
position: 21101729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:21039477-21039658:-1:exon

position:21039477:-1
position: 21039477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21039658:-1
position: 21039658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:21012146-21012254:-1:exon

position:21012146:-1
position: 21012146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21012254:-1
position: 21012254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:20948173-20951393:-1:exon

position:20951393:-1
position: 20951393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIAA1328
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: KIAA1328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein hinderin
translation: MVNPKADVKLKTSRVTTTPVSMEYLKGAGDSVDEQSFCRGEIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTEERLKAEQESFEKKIRQLEEQNELIIKEREALQLQYKECQELLSLYQKYLSEQQEKLTMSVSELGAAKMQEQQVSNRKSTLPSASLELDGSYLSXPKPQINTQTKQRPKSANQDSALESLVEFRNNSLKPATLHYSKEBMGKVPSETRTFNYRSPGKKLVDAVPTEKAPPKELKMKECQHLQAPPSGQCCGHGLSENADHVYESHPTNMGPQHSKTHLDSCRYCGLSWASLMHGHGALPPNENDIRKQLSEDRRQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNWLRTQAVFKSRELVANKEITKPXELSLDVNGSGSGPSLLKSECDDWTLGTSPSSKKCQDSTNSGASRRDKKTVGFQSQMEDDALWTSQKKDACRSQRGTVAEVRKDASTSPMTTGSQKELVTPATSSSQQDGSRYETSLLDLVQSLSPKTASKPRPHRSREGGSWNHRTCRLSPLKSTWNKTRAGSTPEDLEENQILEDIFFI
SIO_010081: KIAA1328
subclass of: SO_0000673
so part of: KIAA1328
location: complement(join(20951183..20951393,21012146..21012254,21039477..21039658,21101622..21101729,21107162..21107835,21209559..21209686,21305644..21305759,21350648..21350742,21359815..21359919))
location: region:20951183-21359919:-1
so has part: feature:21359815-21359919:-1:exon
so has part: feature:21350648-21350742:-1:exon
so has part: feature:21305644-21305759:-1:exon
so has part: feature:21209559-21209686:-1:exon
so has part: feature:21107162-21107835:-1:exon
so has part: feature:21101622-21101729:-1:exon
so has part: feature:21039477-21039658:-1:exon
so has part: feature:21012146-21012254:-1:exon
so has part: feature:20951183-20951393:-1:exon

XP_019842462.1
type: Protein
SIO_000068: ncbiprotein

position:20951183:-1
position: 20951183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21359919:-1
position: 21359919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21359815-21359919:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21350648-21350742:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:21305644-21305759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21209559-21209686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21107162-21107835:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21101622-21101729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21039477-21039658:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21012146-21012254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:20951183-20951393:-1:exon

TPGS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TPGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 21368076..21432414
location: region:21368076-21432414:1
so has part: feature:21368076-21432414:1:exon
subclass of: SO_0000010

109577920
type: Gene
SIO_000068: ncbigene

position:21368076:1
position: 21368076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21432414:1
position: 21432414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21368076-21432414:1:exon

TPGS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TPGS2
product: tubulin polyglutamylase complex subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 29 ESTs, 12 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 226 samples with support for all annotated introns
transcript id: XM_019986898.1
SIO_010081: TPGS2
subclass of: SO_0000673
so part of: TPGS2
location: join(21368076..21368182,21386989..21387068,21414206..21414293,21416256..21416384,21427295..21427408,21428907..21429067,21430389..21432414)
location: region:21368076-21432414:1
so has part: feature:21368076-21368182:1:exon
so has part: feature:21386989-21387068:1:exon
so has part: feature:21414206-21414293:1:exon
so has part: feature:21416256-21416384:1:exon
so has part: feature:21427295-21427408:1:exon
so has part: feature:21428907-21429067:1:exon
so has part: feature:21430389-21432414:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21368076-21368182:1:exon

position:21368182:1
position: 21368182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21386989-21387068:1:exon

position:21386989:1
position: 21386989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21387068:1
position: 21387068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:21414206-21414293:1:exon

position:21414206:1
position: 21414206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21414293:1
position: 21414293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:21416256-21416384:1:exon

position:21416256:1
position: 21416256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21416384:1
position: 21416384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:21427295-21427408:1:exon

position:21427295:1
position: 21427295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21427408:1
position: 21427408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:21428907-21429067:1:exon

position:21428907:1
position: 21428907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21429067:1
position: 21429067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:21430389-21432414:1:exon

position:21430389:1
position: 21430389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPGS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TPGS2
product: tubulin polyglutamylase complex subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 28 ESTs, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_019986899.1
SIO_010081: TPGS2
subclass of: SO_0000673
so part of: TPGS2
location: join(21368076..21368182,21386989..21387068,21414206..21414293,21427295..21427408,21428907..21429067,21430389..21432410)
location: region:21368076-21432410:1
so has part: feature:21368076-21368182:1:exon
so has part: feature:21386989-21387068:1:exon
so has part: feature:21414206-21414293:1:exon
so has part: feature:21427295-21427408:1:exon
so has part: feature:21428907-21429067:1:exon
so has part: feature:21430389-21432410:1:exon

position:21432410:1
position: 21432410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21368076-21368182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21386989-21387068:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:21414206-21414293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21427295-21427408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21428907-21429067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21430389-21432410:1:exon

TPGS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TPGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polyglutamylase complex subunit 2 isoform X1
translation: MEETSPPLLGSSKPHLEKLTLGVTRILESSPGVTEVTIIEKPPAERHMISSWEQKNNCVLPEDLKNFYLMTNGFHMTWNVKLDEHTIPLGSMAINSISKLTQLNQSSMYSLPNAPTLADLEDDIQEASENHPEKPHFDSRSVIFELDPCNGNGKVCLVYKRGKPGLAQDTEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTSYGISPQAKQWFNMYKPITYNTNLLTEETDSFVNKLDPSKVFKSKNKTIIPKKKGPVQPAGGQKGPSGSASTSKSSSGSGNPVRK
SIO_010081: TPGS2
subclass of: SO_0000673
so part of: TPGS2
location: join(21368101..21368182,21386989..21387068,21414206..21414293,21416256..21416384,21427295..21427408,21428907..21429067,21430389..21430619)
location: region:21368101-21430619:1
so has part: feature:21368101-21368182:1:exon
so has part: feature:21386989-21387068:1:exon
so has part: feature:21414206-21414293:1:exon
so has part: feature:21416256-21416384:1:exon
so has part: feature:21427295-21427408:1:exon
so has part: feature:21428907-21429067:1:exon
so has part: feature:21430389-21430619:1:exon

XP_019842457.1
type: Protein
SIO_000068: ncbiprotein

position:21368101:1
position: 21368101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21430619:1
position: 21430619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21368101-21368182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21386989-21387068:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:21414206-21414293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21416256-21416384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21427295-21427408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21428907-21429067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21430389-21430619:1:exon

TPGS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TPGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polyglutamylase complex subunit 2 isoform X2
translation: MEETSPPLLGSSKPHLEKLTLGVTRILESSPGVTEVTIIEKPPAERHMISSWEQKNNCVLPEDLKNFYLMTNGFHMTWNVKLDASENHPEKPHFDSRSVIFELDPCNGNGKVCLVYKRGKPGLAQDTEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTSYGISPQAKQWFNMYKPITYNTNLLTEETDSFVNKLDPSKVFKSKNKTIIPKKKGPVQPAGGQKGPSGSASTSKSSSGSGNPVRK
SIO_010081: TPGS2
subclass of: SO_0000673
so part of: TPGS2
location: join(21368101..21368182,21386989..21387068,21414206..21414293,21427295..21427408,21428907..21429067,21430389..21430619)
location: region:21368101-21430619:1
so has part: feature:21368101-21368182:1:exon
so has part: feature:21386989-21387068:1:exon
so has part: feature:21414206-21414293:1:exon
so has part: feature:21427295-21427408:1:exon
so has part: feature:21428907-21429067:1:exon
so has part: feature:21430389-21430619:1:exon

XP_019842458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21368101-21368182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21386989-21387068:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:21414206-21414293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21427295-21427408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21428907-21429067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21430389-21430619:1:exon

FHOD3
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: FHOD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(21440452..21964531)
location: region:21440452-21964531:-1
so has part: feature:21440452-21964531:-1:exon
subclass of: SO_0000010

109577827
type: Gene
SIO_000068: ncbigene

position:21440452:-1
position: 21440452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21964531:-1
position: 21964531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21440452-21964531:-1:exon

FHOD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FHOD3
product: formin homology 2 domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019986695.1
SIO_010081: FHOD3
subclass of: SO_0000673
so part of: FHOD3
location: complement(join(21440452..21442857,21455715..21455876,21464354..21464528,21465851..21465874,21469672..21469864,21475888..21476078,21482101..21482262,21483295..21483414,21485231..21485413,21498402..21498560,21512525..21513405,21522328..21522618,21538558..21538772,21545531..21545581,21550625..21550759,21578434..21578547,21583331..21583405,21584030..21584359,21587339..21587434,21606080..21606321,21619897..21620040,21627429..21627523,21635991..21636102,21655021..21655115,21726315..21726420,21733531..21733598,21888166..21888230,21902526..21902632,21964230..21964511))
location: region:21440452-21964511:-1
so has part: feature:21964230-21964511:-1:exon
so has part: feature:21902526-21902632:-1:exon
so has part: feature:21888166-21888230:-1:exon
so has part: feature:21733531-21733598:-1:exon
so has part: feature:21726315-21726420:-1:exon
so has part: feature:21655021-21655115:-1:exon
so has part: feature:21635991-21636102:-1:exon
so has part: feature:21627429-21627523:-1:exon
so has part: feature:21619897-21620040:-1:exon
so has part: feature:21606080-21606321:-1:exon
so has part: feature:21587339-21587434:-1:exon
so has part: feature:21584030-21584359:-1:exon
so has part: feature:21583331-21583405:-1:exon
so has part: feature:21578434-21578547:-1:exon
so has part: feature:21550625-21550759:-1:exon
so has part: feature:21545531-21545581:-1:exon
so has part: feature:21538558-21538772:-1:exon
so has part: feature:21522328-21522618:-1:exon
so has part: feature:21512525-21513405:-1:exon
so has part: feature:21498402-21498560:-1:exon
so has part: feature:21485231-21485413:-1:exon
so has part: feature:21483295-21483414:-1:exon
so has part: feature:21482101-21482262:-1:exon
so has part: feature:21475888-21476078:-1:exon
so has part: feature:21469672-21469864:-1:exon
so has part: feature:21465851-21465874:-1:exon
so has part: feature:21464354-21464528:-1:exon
so has part: feature:21455715-21455876:-1:exon
so has part: feature:21440452-21442857:-1:exon

position:21964511:-1
position: 21964511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21964230-21964511:-1:exon

position:21964230:-1
position: 21964230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21902526-21902632:-1:exon

position:21902526:-1
position: 21902526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21902632:-1
position: 21902632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:21888166-21888230:-1:exon

position:21888166:-1
position: 21888166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21888230:-1
position: 21888230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:21733531-21733598:-1:exon

position:21733531:-1
position: 21733531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21733598:-1
position: 21733598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:21726315-21726420:-1:exon

position:21726315:-1
position: 21726315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21726420:-1
position: 21726420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:21655021-21655115:-1:exon

position:21655021:-1
position: 21655021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21655115:-1
position: 21655115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:21635991-21636102:-1:exon

position:21635991:-1
position: 21635991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21636102:-1
position: 21636102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:21627429-21627523:-1:exon

position:21627429:-1
position: 21627429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21627523:-1
position: 21627523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:21619897-21620040:-1:exon

position:21619897:-1
position: 21619897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21620040:-1
position: 21620040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:21606080-21606321:-1:exon

position:21606080:-1
position: 21606080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21606321:-1
position: 21606321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:21587339-21587434:-1:exon

position:21587339:-1
position: 21587339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21587434:-1
position: 21587434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:21584030-21584359:-1:exon

position:21584030:-1
position: 21584030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21584359:-1
position: 21584359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:21583331-21583405:-1:exon

position:21583331:-1
position: 21583331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21583405:-1
position: 21583405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:21578434-21578547:-1:exon

position:21578434:-1
position: 21578434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21578547:-1
position: 21578547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:21550625-21550759:-1:exon

position:21550625:-1
position: 21550625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21550759:-1
position: 21550759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:21545531-21545581:-1:exon

position:21545531:-1
position: 21545531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21545581:-1
position: 21545581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:21538558-21538772:-1:exon

position:21538558:-1
position: 21538558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21538772:-1
position: 21538772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:21522328-21522618:-1:exon

position:21522328:-1
position: 21522328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21522618:-1
position: 21522618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:21512525-21513405:-1:exon

position:21512525:-1
position: 21512525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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SIO_000300: 20
SIO_000628: feature:21498402-21498560:-1:exon

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SIO_000300: 21
SIO_000628: feature:21485231-21485413:-1:exon

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SIO_000300: 22
SIO_000628: feature:21483295-21483414:-1:exon

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SIO_000300: 23
SIO_000628: feature:21482101-21482262:-1:exon

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SIO_000300: 24
SIO_000628: feature:21475888-21476078:-1:exon

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SIO_000300: 25
SIO_000628: feature:21469672-21469864:-1:exon

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SIO_000300: 26
SIO_000628: feature:21465851-21465874:-1:exon

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SIO_000300: 27
SIO_000628: feature:21464354-21464528:-1:exon

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SIO_000300: 28
SIO_000628: feature:21455715-21455876:-1:exon

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SIO_000300: 29
SIO_000628: feature:21440452-21442857:-1:exon

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FHOD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FHOD3
product: formin homology 2 domain containing 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 18 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_019986701.1
SIO_010081: FHOD3
subclass of: SO_0000673
so part of: FHOD3
location: complement(join(21442333..21442857,21455715..21455876,21464354..21464528,21469672..21469864,21475888..21476078,21482101..21482262,21483295..21483414,21485231..21485413,21498402..21498560,21512525..21513405,21522328..21522618,21538558..21538772,21545531..21545581,21550625..21550759,21578434..21578547,21606080..21606321,21619897..21620040,21627429..21627523,21635991..21636102,21655021..21655115,21726315..21726420,21733531..21733598,21888166..21888230,21902526..21902632,21964230..21964531))
location: region:21442333-21964531:-1
so has part: feature:21964230-21964531:-1:exon
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reference: sequence
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SIO_000628: feature:21578434-21578547:-1:exon

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SIO_000300: 12
SIO_000628: feature:21550625-21550759:-1:exon

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SIO_000300: 13
SIO_000628: feature:21545531-21545581:-1:exon

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SIO_000300: 14
SIO_000628: feature:21538558-21538772:-1:exon