Bos indicus isolate QUIL7308 breed Nelore chromosome 23, Bos_indicus_1.0, whole genome shotgun sequence.
type: Entry
definition: Bos indicus isolate QUIL7308 breed Nelore chromosome 23, Bos_indicus_1.0, whole genome shotgun sequence.
sequence version: NC_032672.1
sequence date: 2017-01-12
sequence: sequence
division: CON
label: NC_032672.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA360096
dblink: SAMN02953802
keyword: WGS
keyword: RefSeq
source: Bos indicus (Bos taurus indicus)
organism: Bos indicus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos.
reference: 1
references: 22315242
reference: 2
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003043.1.\nAssembly name: Bos_indicus_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Genoa Biotecnologia SA on\n2014/11/25. The original whole-genome shotgun project has the\naccession AGFL00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Genoa Biotecnologia SA\nAssembly Method :: BWA v. 0.5.9\nAssembly Name :: Bos_indicus_1.0\nReference-guided Assembly :: GCF_000003205.2; Btau_4.0\nGenome Coverage :: 52x\nSequencing Technology :: SOLiD\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Bos indicus Annotation Release 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 53331160
topology: linear
so has quality: SO_0000987
location: 1..53331160
location: region:1-53331160:1
RO_0002162: 9915

NC_032672
type: RefSeq
SIO_000068: refseq

PRJNA360096
type: BioProject
SIO_000068: bioproject

SAMN02953802
type: BioSample
SIO_000068: biosample

1
title: Genome sequence and assembly of Bos indicus
author: Canavez, F.C.
author: Luche, D.D.
author: Stothard, P.
author: Leite, K.R.
author: Sousa-Canavez, J.M.
author: Plastow, G.
author: Meidanis, J.
author: Souza, M.A.
author: Feijao, P.
author: Moore, S.S.
author: Camara-Lopes, L.H.
journal: J. Hered.
volume: 103
issue: 3
pages: 342-348
year: 2012
pubmed: 22315242

22315242
type: PubMed
SIO_000068: pubmed

2
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53331160:1
position: 53331160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-53331160:1:source
so part of: sequence
organism: Bos indicus
mol type: genomic DNA
isolate: QUIL7308
chromosome: 23
sex: male
tissue type: peripheral blood mononuclear cells
country: Brazil
breed: Nelore
note: animal owned by Agropecuaria Quilombo Inc.

9915
type: Taxonomy
SIO_000068: taxonomy

MLIP
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 60183..345110
location: region:60183-345110:1
so has part: feature:60183-345110:1:exon
subclass of: SO_0000010

109576956
type: Gene
SIO_000068: ncbigene

position:60183:1
position: 60183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345110:1
position: 345110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60183-345110:1:exon

MLIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MLIP
product: muscular LMNA interacting protein, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_019985611.1
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(60183..60262,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333482,343557..345110)
location: region:60183-345110:1
so has part: feature:60183-60262:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333482:1:exon
so has part: feature:343557-345110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60183-60262:1:exon

position:60262:1
position: 60262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

position:200355:1
position: 200355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200747:1
position: 200747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

position:218293:1
position: 218293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219849:1
position: 219849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

position:240114:1
position: 240114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240185:1
position: 240185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

position:250726:1
position: 250726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250791:1
position: 250791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

position:250876:1
position: 250876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250959:1
position: 250959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

position:251080:1
position: 251080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251139:1
position: 251139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

position:260016:1
position: 260016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260060:1
position: 260060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

position:272890:1
position: 272890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272934:1
position: 272934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

position:286216:1
position: 286216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286344:1
position: 286344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:310649-310855:1:exon

position:310649:1
position: 310649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310855:1
position: 310855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:333367-333482:1:exon

position:333367:1
position: 333367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333482:1
position: 333482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:343557-345110:1:exon

position:343557:1
position: 343557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MLIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MLIP
product: muscular LMNA interacting protein, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 161 samples with support for all annotated introns
transcript id: XM_019985612.1
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71508..71709,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,333367..333482,343557..345110)
location: region:71508-345110:1
so has part: feature:71508-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:333367-333482:1:exon
so has part: feature:343557-345110:1:exon

position:71508:1
position: 71508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71508-71709:1:exon

position:71709:1
position: 71709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:333367-333482:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:343557-345110:1:exon

MLIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MLIP
product: muscular LMNA interacting protein, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 189 samples with support for all annotated introns
transcript id: XM_019985608.1
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71508..71709,200355..200747,218293..219849,240114..240185,250726..250791,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333482,343557..345110)
location: region:71508-345110:1
so has part: feature:71508-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333482:1:exon
so has part: feature:343557-345110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71508-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:333367-333482:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:343557-345110:1:exon

MLIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MLIP
product: muscular LMNA interacting protein, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_019985606.1
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71508..71709,200355..200747,218293..219849,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333482,343557..345110)
location: region:71508-345110:1
so has part: feature:71508-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333482:1:exon
so has part: feature:343557-345110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71508-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:333367-333482:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:343557-345110:1:exon

MLIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MLIP
product: muscular LMNA interacting protein, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_019985610.1
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71508..71709,200355..200747,218293..219849,250726..250791,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333482,343557..345110)
location: region:71508-345110:1
so has part: feature:71508-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333482:1:exon
so has part: feature:343557-345110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71508-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333367-333482:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343557-345110:1:exon

MLIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MLIP
product: muscular LMNA interacting protein, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_019985613.1
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71508..71709,200355..200747,218293..219849,250726..250791,260016..260060,272890..272934,286216..286344,310649..310855,333367..333482,343557..345110)
location: region:71508-345110:1
so has part: feature:71508-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333482:1:exon
so has part: feature:343557-345110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71508-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333367-333482:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343557-345110:1:exon

MLIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MLIP
product: muscular LMNA interacting protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 191 samples with support for all annotated introns
transcript id: XM_019985600.1
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71509..71709,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333482,343557..345110)
location: region:71509-345110:1
so has part: feature:71509-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333482:1:exon
so has part: feature:343557-345110:1:exon

position:71509:1
position: 71509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71509-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:333367-333482:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343557-345110:1:exon

MLIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MLIP
product: muscular LMNA interacting protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 196 samples with support for all annotated introns
transcript id: XM_019985601.1
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71509..71709,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333420,343557..345110)
location: region:71509-345110:1
so has part: feature:71509-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333420:1:exon
so has part: feature:343557-345110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71509-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:333367-333420:1:exon

position:333420:1
position: 333420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:343557-345110:1:exon

MLIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MLIP
product: muscular LMNA interacting protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 194 samples with support for all annotated introns
transcript id: XM_019985605.1
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71509..71709,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,343557..345110)
location: region:71509-345110:1
so has part: feature:71509-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:343557-345110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71509-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:343557-345110:1:exon

MLIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MLIP
product: muscular LMNA interacting protein, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 196 samples with support for all annotated introns
transcript id: XM_019985615.1
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71509..71709,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,343557..345110)
location: region:71509-345110:1
so has part: feature:71509-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:343557-345110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71509-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343557-345110:1:exon

MLIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MLIP
product: muscular LMNA interacting protein, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 191 samples with support for all annotated introns
transcript id: XM_019985609.1
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71509..71709,200355..200747,218293..219849,240114..240185,250726..250791,260016..260060,272890..272934,286216..286344,310649..310855,333367..333482,343557..345110)
location: region:71509-345110:1
so has part: feature:71509-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333482:1:exon
so has part: feature:343557-345110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71509-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333367-333482:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343557-345110:1:exon

MLIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MLIP
product: muscular LMNA interacting protein, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 149 samples with support for all annotated introns
transcript id: XM_019985607.1
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71509..71709,200355..200747,218368..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333482,343557..345110)
location: region:71509-345110:1
so has part: feature:71509-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218368-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333482:1:exon
so has part: feature:343557-345110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71509-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218368-219849:1:exon

position:218368:1
position: 218368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:333367-333482:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343557-345110:1:exon

MLIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscular LMNA-interacting protein isoform X2
translation: MDFEKHGKGSLLNENLEEKLTFDSSEYFTLNVGXQQERERGALTCPSEAEDKASQGRESKEKKPQGMQQSDLFKAEYVFIVDSEGEEEVPGRKGDQGPPVGTGPPAARPASLAISSSLASDAVRPKTRGADLQAPSHPERPQAMASQQRHGQLTSPTASEQLARKPPAFSFVSPTNQKTPPAPGDLASASVLEEFHSRRLDARGALVEETTTYFQTSAHSAPFFAPKGTSSTSQVPQPAQLSGSPSSSPSTAQQNPGQTSEVLKKTVTSNVLSPRESPRASSPSPASGASLKSSAASYIPVRIVTHSLSPSPRAFPSPFHGSSSTVCSQASSSGSLSRSGVKPPVPSRLSVLTAILKSSPSHQRPLSPASCPTFSLNSLASSTLTLDQKVKQTPPTPKKSLSSCSLRSGSPEQRENPVSDLSQPSFXXPSPTKAAPPPQASALXPPKQGGSSFASVIVEKMPSPTLKSSPVTSQLQTGTSSSVGLPPVPPSFSPLSSKGRQDADPRGPGKPRDICSHASTSPSSTSSSVSPPTNPRAMLSSPERRYHPSPALSNLINRSKSAQAPVSSQRQTPSTAPPVPVSSSSSASLPCLGSSALPLANPPTKTHQLSTSALHPNLSLPSRLGKSESSISDHRSSVSAPSPPFCLTRTKELSSPCALSMSAGPENKKPKQYKTKSSYKAFAAIPTNTLLLEQKALDEPAKTDSISKDSTLDPPLELCSPAQLRQQTEELCATIDKVLQDSLSMHSSDSPSSSLQTFLGSDTIKMPTTLPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKILLKKEEEVYEPNPFSKYLEDNSDFFSEQDVPAPPKPVSLHPLYQTRLHPPAKSLLRPQTRPHADGLTPGPFSHLSSFSLSDEQENSHTLFSHNAYNKLSHPMMAIPEHETLDSKEQ
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71647..71709,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333420,343557..343562)
location: region:71647-343562:1
so has part: feature:71647-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333420:1:exon
so has part: feature:343557-343562:1:exon

XP_019841160.1
type: Protein
SIO_000068: ncbiprotein

position:71647:1
position: 71647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343562:1
position: 343562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71647-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:333367-333420:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343557-343562:1:exon

MLIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscular LMNA-interacting protein isoform X5
translation: MDFEKHGKGSLLNENLEEKLTFDSSEYFTLNVGXQQERERGALTCPSEAEDKASQGRESKEKKPQGMQQSDLFKAEYVFIVDSEGEEEVPGRKGDQGPPVGTGPPAARPASLAISSSLASDAVRPKTRGADLQAPSHPERPQAMASQQRHGQLTSPTASEQLARKPPAFSFVSPTNQKTPPAPGDLASASVLEEFHSRRLDARGALVEETTTYFQTSAHSAPFFAPKGTSSTSQVPQPAQLSGSPSSSPSTAQQNPGQTSEVLKKTVTSNVLSPRESPRASSPSPASGASLKSSAASYIPVRIVTHSLSPSPRAFPSPFHGSSSTVCSQASSSGSLSRSGVKPPVPSRLSVLTAILKSSPSHQRPLSPASCPTFSLNSLASSTLTLDQKVKQTPPTPKKSLSSCSLRSGSPEQRENPVSDLSQPSFXXPSPTKAAPPPQASALXPPKQGGSSFASVIVEKMPSPTLKSSPVTSQLQTGTSSSVGLPPVPPSFSPLSSKGRQDADPRGPGKPRDICSHASTSPSSTSSSVSPPTNPRAMLSSPERRYHPSPALSNLINRSKSAQAPVSSQRQTPSTAPPVPVSSSSSASLPCLGSSALPLANPPTKTHQLSTSALHPNLSLPSRLGKSESSISDHRSSVSAPSPPFCLTRTKELSSPCALSMSAGPENKKPKQYKTKSSYKAFAAIPTNTLLLEQKALDEPAKTDSISKDSTLDPPLELCSPAQLRQQTEELCATIDKVLQDSLSMHSSDSPSSSLQTFLGSDTIKMPTTLPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKILLKKEEEVYEPNPFSKYLEDNSDFFSEQDVPAPPKPVSLHPLYQTRLHPPAKSLLRPQTRPHADGLTPGPFSHLSSFSLSDEQENSHTLFSHNAYNKQ
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71647..71709,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,343557..343562)
location: region:71647-343562:1
so has part: feature:71647-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:343557-343562:1:exon

XP_019841164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71647-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:343557-343562:1:exon

MLIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscular LMNA-interacting protein isoform X14
translation: MDFEKHGKGSLLNENLEEKLTFDSSEYFTLNVGXQQERERGALTCPSEAEDKASQGRESKEKKPQGMQQSDLFKAEYVFIVDSEGEEEVPGRKGDQGPPVGTGPPAARPASLAISSSLASDAVRPKTRGADLQAPSHPERPQAMASQQRHGQLTSPTASEQLARKPPAFSFVSPTNQKTPPAPGDLASASVLEEFHSRRLDARGALVEETTTYFQTSAHSAPFFAPKGTSSTSQVPQPAQLSGSPSSSPSTAQQNPGQTSEVLKKTVTSNVLSPRESPRASSPSPASGASLKSSAASYIPVRIVTHSLSPSPRAFPSPFHGSSSTVCSQASSSGSLSRSGVKPPVPSRLSVLTAILKSSPSHQRPLSPASCPTFSLNSLASSTLTLDQKVKQTPPTPKKSLSSCSLRSGSPEQRENPVSDLSQPSFXXPSPTKAAPPPQASALXPPKQGGSSFASVIVEKMPSPTLKSSPVTSQLQTGTSSSVGLPPVPPSFSPLSSKGRQDADPRGPGKPRDICSHASTSPSSTSSSVSPPTNPRAMLSSPERRYHPSPALSNLINRSKSAQAPVSSQRQTPSTAPPVPVSSSSSASLPCLGSSALPLANPPTKTHQLSTSALHPNLSLPSRLGKSESSISDHRSSVSAPSPPFCLTRTKELSSPCALSMSAGPENKKPKQYKTKSSYKAFAAIPTNTLLLEQKALDEPAKTDSISKDSTLDPPLELCSPAQLRQQTEELCATIDKVLQDSLSMHSSDSPSSSLQTFLGSDTIKMPTTLPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKILLKKEEEVYEPNPFSKYLEDNSDFFSEQQ
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71647..71709,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,343557..343562)
location: region:71647-343562:1
so has part: feature:71647-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:343557-343562:1:exon

XP_019841174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71647-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343557-343562:1:exon

MLIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscular LMNA-interacting protein isoform X1
translation: MDFEKHGKGSLLNENLEEKLTFDSSEYFTLNVGXQQERERGALTCPSEAEDKASQGRESKEKKPQGMQQSDLFKAEYVFIVDSEGEEEVPGRKGDQGPPVGTGPPAARPASLAISSSLASDAVRPKTRGADLQAPSHPERPQAMASQQRHGQLTSPTASEQLARKPPAFSFVSPTNQKTPPAPGDLASASVLEEFHSRRLDARGALVEETTTYFQTSAHSAPFFAPKGTSSTSQVPQPAQLSGSPSSSPSTAQQNPGQTSEVLKKTVTSNVLSPRESPRASSPSPASGASLKSSAASYIPVRIVTHSLSPSPRAFPSPFHGSSSTVCSQASSSGSLSRSGVKPPVPSRLSVLTAILKSSPSHQRPLSPASCPTFSLNSLASSTLTLDQKVKQTPPTPKKSLSSCSLRSGSPEQRENPVSDLSQPSFXXPSPTKAAPPPQASALXPPKQGGSSFASVIVEKMPSPTLKSSPVTSQLQTGTSSSVGLPPVPPSFSPLSSKGRQDADPRGPGKPRDICSHASTSPSSTSSSVSPPTNPRAMLSSPERRYHPSPALSNLINRSKSAQAPVSSQRQTPSTAPPVPVSSSSSASLPCLGSSALPLANPPTKTHQLSTSALHPNLSLPSRLGKSESSISDHRSSVSAPSPPFCLTRTKELSSPCALSMSAGPENKKPKQYKTKSSYKAFAAIPTNTLLLEQKALDEPAKTDSISKDSTLDPPLELCSPAQLRQQTEELCATIDKVLQDSLSMHSSDSPSSSLQTFLGSDTIKMPTTLPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKILLKKEEEVYEPNPFSKYLEDNSDFFSEQDVPAPPKPVSLHPLYQTRLHPPAKSLLRPQTRPHADGLTPGPFSHLSSFSLSDEQENSHTLFSHNAYNKLSHPMMAIPEHETLDSKEVNVEYN
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71647..71709,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333441)
location: region:71647-333441:1
so has part: feature:71647-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333441:1:exon

XP_019841159.1
type: Protein
SIO_000068: ncbiprotein

position:333441:1
position: 333441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71647-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:333367-333441:1:exon

MLIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscular LMNA-interacting protein isoform X12
translation: MDFEKHGKGSLLNENLEEKLTFDSSEYFTLNVGXQQERERGALTCPSEAEDKASQGRESKEKKPQGMQQSDLFKAEYVFIVDSEGEEEVPGRKGDQGPPVGTGPPAARPASLAISSSLASDAVRPKTRGADLQAPSHPERPQAMASQQRHGQLTSPTASEQLARKPPAFSFVSPTNQKTPPAPGDLASASVLEEFHSRRLDARGALVEETTTYFQTSAHSAPFFAPKGTSSTSQVPQPAQLSGSPSSSPSTAQQNPGQTSEVLKKTVTSNVLSPRESPRASSPSPASGASLKSSAASYIPVRIVTHSLSPSPRAFPSPFHGSSSTVCSQASSSGSLSRSGVKPPVPSRLSVLTAILKSSPSHQRPLSPASCPTFSLNSLASSTLTLDQKVKQTPPTPKKSLSSCSLRSGSPEQRENPVSDLSQPSFXXPSPTKAAPPPQASALXPPKQGGSSFASVIVEKMPSPTLKSSPVTSQLQTGTSSSVGLPPVPPSFSPLSSKGRQDADPRGPGKPRDICSHASTSPSSTSSSVSPPTNPRAMLSSPERRYHPSPALSNLINRSKSAQAPVSSQRQTPSTAPPVPVSSSSSASLPCLGSSALPLANPPTKTHQLSTSALHPNLSLPSRLGKSESSISDHRSSVSAPSPPFCLTRTKELSSPCALSMSAGPENKKPKQYKTKSSYKAFAAIPTNTLLLEQKALDEPAKTDSISKDSTLDPPLELCSPAQLRQQTEELCATIDKVLQDSLSMHSSDSPSSSLQTFLGSDTIKMPTTLPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKILLKKEEEVYEPNPFSKYLEDNSDFFSEQLSHPMMAIPEHETLDSKEVNVEYN
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71647..71709,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,333367..333441)
location: region:71647-333441:1
so has part: feature:71647-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:333367-333441:1:exon

XP_019841171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71647-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:333367-333441:1:exon

MLIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscular LMNA-interacting protein isoform X8
translation: MDFEKHGKGSLLNENLEEKLTFDSSEYFTLNVGXQQERERGALTCPSEAEDKASQGRESKEKKPQGMQQSDLFKAEYVFIVDSEGEEEVPGRKGDQGPPVGTGPPAARPASLAISSSLASDAVRPKTRGADLQAPSHPERPQAMASQQRHGQLTSPTASEQLARKPPAFSFVSPTNQKTPPAPGDLASASVLEEFHSRRLDARGALVEETTTYFQTSAHSAPFFAPKGTSSTSQVPQPAQLSGSPSSSPSTAQQNPGQTSEVLKKTVTSNVLSPRESPRASSPSPASGASLKSSAASYIPVRIVTHSLSPSPRAFPSPFHGSSSTVCSQASSSGSLSRSGVKPPVPSRLSVLTAILKSSPSHQRPLSPASCPTFSLNSLASSTLTLDQKVKQTPPTPKKSLSSCSLRSGSPEQRENPVSDLSQPSFXXPSPTKAAPPPQASALXPPKQGGSSFASVIVEKMPSPTLKSSPVTSQLQTGTSSSVGLPPVPPSFSPLSSKGRQDADPRGPGKPRDICSHASTSPSSTSSSVSPPTNPRAMLSSPERRYHPSPALSNLINRSKSAQAPVSSQRQTPSTAPPVPVSSSSSASLPCLGSSALPLANPPTKTHQLSTSALHPNLSLPSRLGKSESSISDHRSSVSAPSPPFCLTRTKELSSPCALSMSAGPENKKPKQYKTKSSYKAFAAIPTNTLLLEQKALDEPAKTDSISKDSTLDPPLEHSSDSPSSSLQTFLGSDTIKMPTTLPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKILLKKEEEVYEPNPFSKYLEDNSDFFSEQDVPAPPKPVSLHPLYQTRLHPPAKSLLRPQTRPHADGLTPGPFSHLSSFSLSDEQENSHTLFSHNAYNKLSHPMMAIPEHETLDSKEVNVEYN
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71647..71709,200355..200747,218293..219849,240114..240185,250726..250791,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333441)
location: region:71647-333441:1
so has part: feature:71647-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333441:1:exon

XP_019841167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71647-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:333367-333441:1:exon

MLIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscular LMNA-interacting protein isoform X9
translation: MDFEKHGKGSLLNENLEEKLTFDSSEYFTLNVGXQQERERGALTCPSEAEDKASQGRESKEKKPQGMQQSDLFKAEYVFIVDSEGEEEVPGRKGDQGPPVGTGPPAARPASLAISSSLASDAVRPKTRGADLQAPSHPERPQAMASQQRHGQLTSPTASEQLARKPPAFSFVSPTNQKTPPAPGDLASASVLEEFHSRRLDARGALVEETTTYFQTSAHSAPFFAPKGTSSTSQVPQPAQLSGSPSSSPSTAQQNPGQTSEVLKKTVTSNVLSPRESPRASSPSPASGASLKSSAASYIPVRIVTHSLSPSPRAFPSPFHGSSSTVCSQASSSGSLSRSGVKPPVPSRLSVLTAILKSSPSHQRPLSPASCPTFSLNSLASSTLTLDQKVKQTPPTPKKSLSSCSLRSGSPEQRENPVSDLSQPSFXXPSPTKAAPPPQASALXPPKQGGSSFASVIVEKMPSPTLKSSPVTSQLQTGTSSSVGLPPVPPSFSPLSSKGRQDADPRGPGKPRDICSHASTSPSSTSSSVSPPTNPRAMLSSPERRYHPSPALSNLINRSKSAQAPVSSQRQTPSTAPPVPVSSSSSASLPCLGSSALPLANPPTKTHQLSTSALHPNLSLPSRLGKSESSISDHRSSVSAPSPPFCLTRTKELSSPCALSMSAGPENKKPKQYKTKSSYKAFAAIPTNTLLLEQKALDEPAKTDSISKDSTLDPPLEMPTTLPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKILLKKEEEVYEPNPFSKYLEDNSDFFSEQDVPAPPKPVSLHPLYQTRLHPPAKSLLRPQTRPHADGLTPGPFSHLSSFSLSDEQENSHTLFSHNAYNKLSHPMMAIPEHETLDSKEVNVEYN
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71647..71709,200355..200747,218293..219849,240114..240185,250726..250791,260016..260060,272890..272934,286216..286344,310649..310855,333367..333441)
location: region:71647-333441:1
so has part: feature:71647-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333441:1:exon

XP_019841168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71647-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333367-333441:1:exon

MLIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscular LMNA-interacting protein isoform X6
translation: MDFEKHGKGSLLNENLEEKLTFDSSEYFTLNVGXQQERERGALTCPSEAEDKASQGRESKEKKPQGMQQSDLFKAEYVFIVDSEGEEEVPGRKGDQGPPVGTGPPAARPASLAISSSLASDAVRPKTRGADLQAPSHPERPQAMASQQRHGQLTSPTASEQLARKPPAFSFVSPTNQKTPPAPGDLASASVLEEFHSRRLDARGALVEETTTYFQTSAHSAPFFAPKGTSSTSQVPQPAQLSGSPSSSPSTAQQNPGQTSEVLKKTVTSNVLSPRESPRASSPSPASGASLKSSAASYIPVRIVTHSLSPSPRAFPSPFHGSSSTVCSQASSSGSLSRSGVKPPVPSRLSVLTAILKSSPSHQRPLSPASCPTFSLNSLASSTLTLDQKVKQTPPTPKKSLSSCSLRSGSPEQRENPVSDLSQPSFXXPSPTKAAPPPQASALXPPKQGGSSFASVIVEKMPSPTLKSSPVTSQLQTGTSSSVGLPPVPPSFSPLSSKGRQDADPRGPGKPRDICSHASTSPSSTSSSVSPPTNPRAMLSSPERRYHPSPALSNLINRSKSAQAPVSSQRQTPSTAPPVPVSSSSSASLPCLGSSALPLANPPTKTHQLSTSALHPNLSLPSRLGKSESSISDHRSSVSAPSPPFCLTRTKELSSPCALSMSAGPENKKPKALDEPAKTDSISKDSTLDPPLELCSPAQLRQQTEELCATIDKVLQDSLSMHSSDSPSSSLQTFLGSDTIKMPTTLPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKILLKKEEEVYEPNPFSKYLEDNSDFFSEQDVPAPPKPVSLHPLYQTRLHPPAKSLLRPQTRPHADGLTPGPFSHLSSFSLSDEQENSHTLFSHNAYNKLSHPMMAIPEHETLDSKEVNVEYN
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71647..71709,200355..200747,218293..219849,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333441)
location: region:71647-333441:1
so has part: feature:71647-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333441:1:exon

XP_019841165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71647-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:333367-333441:1:exon

MLIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscular LMNA-interacting protein isoform X10
translation: MDFEKHGKGSLLNENLEEKLTFDSSEYFTLNVGXQQERERGALTCPSEAEDKASQGRESKEKKPQGMQQSDLFKAEYVFIVDSEGEEEVPGRKGDQGPPVGTGPPAARPASLAISSSLASDAVRPKTRGADLQAPSHPERPQAMASQQRHGQLTSPTASEQLARKPPAFSFVSPTNQKTPPAPGDLASASVLEEFHSRRLDARGALVEETTTYFQTSAHSAPFFAPKGTSSTSQVPQPAQLSGSPSSSPSTAQQNPGQTSEVLKKTVTSNVLSPRESPRASSPSPASGASLKSSAASYIPVRIVTHSLSPSPRAFPSPFHGSSSTVCSQASSSGSLSRSGVKPPVPSRLSVLTAILKSSPSHQRPLSPASCPTFSLNSLASSTLTLDQKVKQTPPTPKKSLSSCSLRSGSPEQRENPVSDLSQPSFXXPSPTKAAPPPQASALXPPKQGGSSFASVIVEKMPSPTLKSSPVTSQLQTGTSSSVGLPPVPPSFSPLSSKGRQDADPRGPGKPRDICSHASTSPSSTSSSVSPPTNPRAMLSSPERRYHPSPALSNLINRSKSAQAPVSSQRQTPSTAPPVPVSSSSSASLPCLGSSALPLANPPTKTHQLSTSALHPNLSLPSRLGKSESSISDHRSSVSAPSPPFCLTRTKELSSPCALSMSAGPENKKPKALDEPAKTDSISKDSTLDPPLEHSSDSPSSSLQTFLGSDTIKMPTTLPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKILLKKEEEVYEPNPFSKYLEDNSDFFSEQDVPAPPKPVSLHPLYQTRLHPPAKSLLRPQTRPHADGLTPGPFSHLSSFSLSDEQENSHTLFSHNAYNKLSHPMMAIPEHETLDSKEVNVEYN
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71647..71709,200355..200747,218293..219849,250726..250791,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333441)
location: region:71647-333441:1
so has part: feature:71647-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333441:1:exon

XP_019841169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71647-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333367-333441:1:exon

MLIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscular LMNA-interacting protein isoform X13
translation: MDFEKHGKGSLLNENLEEKLTFDSSEYFTLNVGXQQERERGALTCPSEAEDKASQGRESKEKKPQGMQQSDLFKAEYVFIVDSEGEEEVPGRKGDQGPPVGTGPPAARPASLAISSSLASDAVRPKTRGADLQAPSHPERPQAMASQQRHGQLTSPTASEQLARKPPAFSFVSPTNQKTPPAPGDLASASVLEEFHSRRLDARGALVEETTTYFQTSAHSAPFFAPKGTSSTSQVPQPAQLSGSPSSSPSTAQQNPGQTSEVLKKTVTSNVLSPRESPRASSPSPASGASLKSSAASYIPVRIVTHSLSPSPRAFPSPFHGSSSTVCSQASSSGSLSRSGVKPPVPSRLSVLTAILKSSPSHQRPLSPASCPTFSLNSLASSTLTLDQKVKQTPPTPKKSLSSCSLRSGSPEQRENPVSDLSQPSFXXPSPTKAAPPPQASALXPPKQGGSSFASVIVEKMPSPTLKSSPVTSQLQTGTSSSVGLPPVPPSFSPLSSKGRQDADPRGPGKPRDICSHASTSPSSTSSSVSPPTNPRAMLSSPERRYHPSPALSNLINRSKSAQAPVSSQRQTPSTAPPVPVSSSSSASLPCLGSSALPLANPPTKTHQLSTSALHPNLSLPSRLGKSESSISDHRSSVSAPSPPFCLTRTKELSSPCALSMSAGPENKKPKALDEPAKTDSISKDSTLDPPLEMPTTLPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKILLKKEEEVYEPNPFSKYLEDNSDFFSEQDVPAPPKPVSLHPLYQTRLHPPAKSLLRPQTRPHADGLTPGPFSHLSSFSLSDEQENSHTLFSHNAYNKLSHPMMAIPEHETLDSKEVNVEYN
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71647..71709,200355..200747,218293..219849,250726..250791,260016..260060,272890..272934,286216..286344,310649..310855,333367..333441)
location: region:71647-333441:1
so has part: feature:71647-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333441:1:exon

XP_019841172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71647-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333367-333441:1:exon

MLIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscular LMNA-interacting protein isoform X7
translation: MDFEKHGKGSLLNENLEEKLTFDSSEYFTLNVGXQQERERGALTCPSEAEDKASQGRESKEKKPQGMQQSDLFKAEYVFIVDSEGEEEVPGRKGDQGPPVGTGPPAARPASLAISSSLASDAVRPKTRGADLQAPSHPERPQAMASQQRHGQKTPPAPGDLASASVLEEFHSRRLDARGALVEETTTYFQTSAHSAPFFAPKGTSSTSQVPQPAQLSGSPSSSPSTAQQNPGQTSEVLKKTVTSNVLSPRESPRASSPSPASGASLKSSAASYIPVRIVTHSLSPSPRAFPSPFHGSSSTVCSQASSSGSLSRSGVKPPVPSRLSVLTAILKSSPSHQRPLSPASCPTFSLNSLASSTLTLDQKVKQTPPTPKKSLSSCSLRSGSPEQRENPVSDLSQPSFXXPSPTKAAPPPQASALXPPKQGGSSFASVIVEKMPSPTLKSSPVTSQLQTGTSSSVGLPPVPPSFSPLSSKGRQDADPRGPGKPRDICSHASTSPSSTSSSVSPPTNPRAMLSSPERRYHPSPALSNLINRSKSAQAPVSSQRQTPSTAPPVPVSSSSSASLPCLGSSALPLANPPTKTHQLSTSALHPNLSLPSRLGKSESSISDHRSSVSAPSPPFCLTRTKELSSPCALSMSAGPENKKPKQYKTKSSYKAFAAIPTNTLLLEQKALDEPAKTDSISKDSTLDPPLELCSPAQLRQQTEELCATIDKVLQDSLSMHSSDSPSSSLQTFLGSDTIKMPTTLPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKILLKKEEEVYEPNPFSKYLEDNSDFFSEQDVPAPPKPVSLHPLYQTRLHPPAKSLLRPQTRPHADGLTPGPFSHLSSFSLSDEQENSHTLFSHNAYNKLSHPMMAIPEHETLDSKEVNVEYN
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(71647..71709,200355..200747,218368..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333441)
location: region:71647-333441:1
so has part: feature:71647-71709:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218368-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333441:1:exon

XP_019841166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71647-71709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218368-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:333367-333441:1:exon

MLIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MLIP
product: muscular LMNA interacting protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_019985604.1
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(108814..108838,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333482,343557..345110)
location: region:108814-345110:1
so has part: feature:108814-108838:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333482:1:exon
so has part: feature:343557-345110:1:exon

position:108814:1
position: 108814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108814-108838:1:exon

position:108838:1
position: 108838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:333367-333482:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343557-345110:1:exon

MLIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscular LMNA-interacting protein isoform X4
translation: MFDSSEYFTLNVGXQQERERGALTCPSEAEDKASQGRESKEKKPQGMQQSDLFKAEYVFIVDSEGEEEVPGRKGDQGPPVGTGPPAARPASLAISSSLASDAVRPKTRGADLQAPSHPERPQAMASQQRHGQLTSPTASEQLARKPPAFSFVSPTNQKTPPAPGDLASASVLEEFHSRRLDARGALVEETTTYFQTSAHSAPFFAPKGTSSTSQVPQPAQLSGSPSSSPSTAQQNPGQTSEVLKKTVTSNVLSPRESPRASSPSPASGASLKSSAASYIPVRIVTHSLSPSPRAFPSPFHGSSSTVCSQASSSGSLSRSGVKPPVPSRLSVLTAILKSSPSHQRPLSPASCPTFSLNSLASSTLTLDQKVKQTPPTPKKSLSSCSLRSGSPEQRENPVSDLSQPSFXXPSPTKAAPPPQASALXPPKQGGSSFASVIVEKMPSPTLKSSPVTSQLQTGTSSSVGLPPVPPSFSPLSSKGRQDADPRGPGKPRDICSHASTSPSSTSSSVSPPTNPRAMLSSPERRYHPSPALSNLINRSKSAQAPVSSQRQTPSTAPPVPVSSSSSASLPCLGSSALPLANPPTKTHQLSTSALHPNLSLPSRLGKSESSISDHRSSVSAPSPPFCLTRTKELSSPCALSMSAGPENKKPKQYKTKSSYKAFAAIPTNTLLLEQKALDEPAKTDSISKDSTLDPPLELCSPAQLRQQTEELCATIDKVLQDSLSMHSSDSPSSSLQTFLGSDTIKMPTTLPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKILLKKEEEVYEPNPFSKYLEDNSDFFSEQDVPAPPKPVSLHPLYQTRLHPPAKSLLRPQTRPHADGLTPGPFSHLSSFSLSDEQENSHTLFSHNAYNKLSHPMMAIPEHETLDSKEVNVEYN
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(108836..108838,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333441)
location: region:108836-333441:1
so has part: feature:108836-108838:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333441:1:exon

XP_019841163.1
type: Protein
SIO_000068: ncbiprotein

position:108836:1
position: 108836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108836-108838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:333367-333441:1:exon

MLIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MLIP
product: muscular LMNA interacting protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_019985602.1
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(156525..156670,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333482,343557..345110)
location: region:156525-345110:1
so has part: feature:156525-156670:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333482:1:exon
so has part: feature:343557-345110:1:exon

position:156525:1
position: 156525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156525-156670:1:exon

position:156670:1
position: 156670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:333367-333482:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343557-345110:1:exon

MLIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscular LMNA-interacting protein isoform X3
translation: MAPGSVGSWYFGLECSFDSSEYFTLNVGXQQERERGALTCPSEAEDKASQGRESKEKKPQGMQQSDLFKAEYVFIVDSEGEEEVPGRKGDQGPPVGTGPPAARPASLAISSSLASDAVRPKTRGADLQAPSHPERPQAMASQQRHGQLTSPTASEQLARKPPAFSFVSPTNQKTPPAPGDLASASVLEEFHSRRLDARGALVEETTTYFQTSAHSAPFFAPKGTSSTSQVPQPAQLSGSPSSSPSTAQQNPGQTSEVLKKTVTSNVLSPRESPRASSPSPASGASLKSSAASYIPVRIVTHSLSPSPRAFPSPFHGSSSTVCSQASSSGSLSRSGVKPPVPSRLSVLTAILKSSPSHQRPLSPASCPTFSLNSLASSTLTLDQKVKQTPPTPKKSLSSCSLRSGSPEQRENPVSDLSQPSFXXPSPTKAAPPPQASALXPPKQGGSSFASVIVEKMPSPTLKSSPVTSQLQTGTSSSVGLPPVPPSFSPLSSKGRQDADPRGPGKPRDICSHASTSPSSTSSSVSPPTNPRAMLSSPERRYHPSPALSNLINRSKSAQAPVSSQRQTPSTAPPVPVSSSSSASLPCLGSSALPLANPPTKTHQLSTSALHPNLSLPSRLGKSESSISDHRSSVSAPSPPFCLTRTKELSSPCALSMSAGPENKKPKQYKTKSSYKAFAAIPTNTLLLEQKALDEPAKTDSISKDSTLDPPLELCSPAQLRQQTEELCATIDKVLQDSLSMHSSDSPSSSLQTFLGSDTIKMPTTLPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKILLKKEEEVYEPNPFSKYLEDNSDFFSEQDVPAPPKPVSLHPLYQTRLHPPAKSLLRPQTRPHADGLTPGPFSHLSSFSLSDEQENSHTLFSHNAYNKLSHPMMAIPEHETLDSKEVNVEYN
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(156623..156670,200355..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333441)
location: region:156623-333441:1
so has part: feature:156623-156670:1:exon
so has part: feature:200355-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333441:1:exon

XP_019841161.1
type: Protein
SIO_000068: ncbiprotein

position:156623:1
position: 156623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156623-156670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200355-200747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:333367-333441:1:exon

MLIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MLIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscular LMNA-interacting protein isoform X11
translation: MQQSDLFKAEYVFIVDSEGEEEVPGRKGDQGPPVGTGPPAARPASLAISSSLASDAVRPKTRGADLQAPSHPERPQAMASQQRHGQLTSPTASEQLARKPPAFSFVSPTNQKTPPAPGDLASASVLEEFHSRRLDARGALVEETTTYFQTSAHSAPFFAPKGTSSTSQVPQPAQLSGSPSSSPSTAQQNPGQTSEVLKKTVTSNVLSPRESPRASSPSPASGASLKSSAASYIPVRIVTHSLSPSPRAFPSPFHGSSSTVCSQASSSGSLSRSGVKPPVPSRLSVLTAILKSSPSHQRPLSPASCPTFSLNSLASSTLTLDQKVKQTPPTPKKSLSSCSLRSGSPEQRENPVSDLSQPSFXXPSPTKAAPPPQASALXPPKQGGSSFASVIVEKMPSPTLKSSPVTSQLQTGTSSSVGLPPVPPSFSPLSSKGRQDADPRGPGKPRDICSHASTSPSSTSSSVSPPTNPRAMLSSPERRYHPSPALSNLINRSKSAQAPVSSQRQTPSTAPPVPVSSSSSASLPCLGSSALPLANPPTKTHQLSTSALHPNLSLPSRLGKSESSISDHRSSVSAPSPPFCLTRTKELSSPCALSMSAGPENKKPKQYKTKSSYKAFAAIPTNTLLLEQKALDEPAKTDSISKDSTLDPPLELCSPAQLRQQTEELCATIDKVLQDSLSMHSSDSPSSSLQTFLGSDTIKMPTTLPRAAGRETKYANLSSPSSTVPESQLTKPGVIRPAPVKSKILLKKEEEVYEPNPFSKYLEDNSDFFSEQDVPAPPKPVSLHPLYQTRLHPPAKSLLRPQTRPHADGLTPGPFSHLSSFSLSDEQENSHTLFSHNAYNKLSHPMMAIPEHETLDSKEVNVEYN
SIO_010081: MLIP
subclass of: SO_0000673
so part of: MLIP
location: join(200490..200747,218293..219849,240114..240185,250726..250791,250876..250959,251080..251139,260016..260060,272890..272934,286216..286344,310649..310855,333367..333441)
location: region:200490-333441:1
so has part: feature:200490-200747:1:exon
so has part: feature:218293-219849:1:exon
so has part: feature:240114-240185:1:exon
so has part: feature:250726-250791:1:exon
so has part: feature:250876-250959:1:exon
so has part: feature:251080-251139:1:exon
so has part: feature:260016-260060:1:exon
so has part: feature:272890-272934:1:exon
so has part: feature:286216-286344:1:exon
so has part: feature:310649-310855:1:exon
so has part: feature:333367-333441:1:exon

XP_019841170.1
type: Protein
SIO_000068: ncbiprotein

position:200490:1
position: 200490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200490-200747:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218293-219849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240114-240185:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250726-250791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250876-250959:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251080-251139:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260016-260060:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:272890-272934:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:286216-286344:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310649-310855:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:333367-333441:1:exon

TINAG
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TINAG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 406473..511855
location: region:406473-511855:1
so has part: feature:406473-511855:1:exon
subclass of: SO_0000010

109576534
type: Gene
SIO_000068: ncbigene

position:406473:1
position: 406473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511855:1
position: 511855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406473-511855:1:exon

TINAG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TINAG
product: tubulointerstitial nephritis antigen
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019985171.1
SIO_010081: TINAG
subclass of: SO_0000673
so part of: TINAG
location: join(406473..406827,420106..420169,420807..420896,430180..430271,431424..431500,445343..445466,449457..449607,452483..452663,454711..454756,458125..458248,494420..494465,511565..511855)
location: region:406473-511855:1
so has part: feature:406473-406827:1:exon
so has part: feature:420106-420169:1:exon
so has part: feature:420807-420896:1:exon
so has part: feature:430180-430271:1:exon
so has part: feature:431424-431500:1:exon
so has part: feature:445343-445466:1:exon
so has part: feature:449457-449607:1:exon
so has part: feature:452483-452663:1:exon
so has part: feature:454711-454756:1:exon
so has part: feature:458125-458248:1:exon
so has part: feature:494420-494465:1:exon
so has part: feature:511565-511855:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:406473-406827:1:exon

position:406827:1
position: 406827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:420106-420169:1:exon

position:420106:1
position: 420106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420169:1
position: 420169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:420807-420896:1:exon

position:420807:1
position: 420807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420896:1
position: 420896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:430180-430271:1:exon

position:430180:1
position: 430180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430271:1
position: 430271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:431424-431500:1:exon

position:431424:1
position: 431424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431500:1
position: 431500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:445343-445466:1:exon

position:445343:1
position: 445343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445466:1
position: 445466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:449457-449607:1:exon

position:449457:1
position: 449457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449607:1
position: 449607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:452483-452663:1:exon

position:452483:1
position: 452483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452663:1
position: 452663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:454711-454756:1:exon

position:454711:1
position: 454711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454756:1
position: 454756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:458125-458248:1:exon

position:458125:1
position: 458125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458248:1
position: 458248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:494420-494465:1:exon

position:494420:1
position: 494420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494465:1
position: 494465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:511565-511855:1:exon

position:511565:1
position: 511565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TINAG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TINAG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulointerstitial nephritis antigen
translation: MCAGYKILILAYLTTEIWMERQYLSQREVDPGAEFTRNHTISEGTRFKRAVFEGQYCRRFGCCADRDDGCVTQFYEADALCYCDKFCERENSDCCPDYKSFCREEKGWPPRTKPWSPEGCHRDGQHYEEGSVIKENCNSCTCSGQQWKCSQHVCLVQPGLIEHVNKGDYGWTAQNYSQFWGMTLEEGFKYRLGTLPPSPPKHLQTLPDKLANSFMKLPRFLTPSCSASLTKTTDLPEFFIASYKWPGWTHGPLDQKNCAASWAFSTASVAADRIAIQSQGRYTANLSPQNLISCCAKKRHGCNSGSVDRAWWYLRKRGLVSHACYPLFKDQNATNNGCAMASRSDGRGKRHATTPCPNSIEKSNRIYQCSPPYRVSSNETEIMREIMQNGPVQAIMQVHEDFFNYKTGIYRHITSTNEDSEKYRKFRTHAVKLTGWGTLRGAQGQKEKFWIAANSWGKSWGENGYFRILRGVNESDIEKLIIAAWGQLTSADEP
SIO_010081: TINAG
subclass of: SO_0000673
so part of: TINAG
location: join(406473..406827,420106..420169,420807..420896,430180..430271,431424..431500,445343..445466,449457..449607,452483..452663,454711..454756,458125..458248,494420..494465,511565..511699)
location: region:406473-511699:1
so has part: feature:406473-406827:1:exon
so has part: feature:420106-420169:1:exon
so has part: feature:420807-420896:1:exon
so has part: feature:430180-430271:1:exon
so has part: feature:431424-431500:1:exon
so has part: feature:445343-445466:1:exon
so has part: feature:449457-449607:1:exon
so has part: feature:452483-452663:1:exon
so has part: feature:454711-454756:1:exon
so has part: feature:458125-458248:1:exon
so has part: feature:494420-494465:1:exon
so has part: feature:511565-511699:1:exon

XP_019840730.1
type: Protein
SIO_000068: ncbiprotein

position:511699:1
position: 511699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406473-406827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420106-420169:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420807-420896:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430180-430271:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431424-431500:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445343-445466:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449457-449607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452483-452663:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:454711-454756:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:458125-458248:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:494420-494465:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:511565-511699:1:exon

FAM83B
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: FAM83B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1015231..1088761
location: region:1015231-1088761:1
so has part: feature:1015231-1088761:1:exon
subclass of: SO_0000010

109577444
type: Gene
SIO_000068: ncbigene

position:1015231:1
position: 1015231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088761:1
position: 1088761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1015231-1088761:1:exon

FAM83B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FAM83B
product: family with sequence similarity 83 member B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_019986372.1
SIO_010081: FAM83B
subclass of: SO_0000673
so part of: FAM83B
location: join(1015231..1015737,1080853..1081017,1081684..1081808,1086051..1088761)
location: region:1015231-1088761:1
so has part: feature:1015231-1015737:1:exon
so has part: feature:1080853-1081017:1:exon
so has part: feature:1081684-1081808:1:exon
so has part: feature:1086051-1088761:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1015231-1015737:1:exon

position:1015737:1
position: 1015737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1080853-1081017:1:exon

position:1080853:1
position: 1080853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081017:1
position: 1081017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1081684-1081808:1:exon

position:1081684:1
position: 1081684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081808:1
position: 1081808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1086051-1088761:1:exon

position:1086051:1
position: 1086051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM83B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FAM83B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM83B
translation: MESSSMLSSLNDECKSDNYIEPHYKEWYRVAVDTLIEHGLDAYKEFLAKERVSDFLAEEEINYILNNVQKVAQSTSHGPDNSCDDASSSGTYWPVESDVEAPNLDLGWPYVMPGLLGGTHIELLFHPPRAQLLTIKETVRKMIKEARKVIALAMDIFTDVDIFKEIVEASTRGISVYILLDESKFSHFLSMTEKQGCQVQRLRNIRVRTVKGQDYLSKTGAKFHGKMEQKFLLVDCQKVMFGSYSYMWSFEKAHLSMVQVITGQLVESFDEEFRTLYARSCVPSSFAPEESVRVNRGKALWENGTYQRSVSSLASVSSQRNLFGRQDSIHKLDSSYFKNRGIYTRNEHDKYNIRNHTYKPHFVPNFNGPIRQHQHSQLNENWKRHSYAGEQPETTPYLLLNRALNRNVNAPGNWKKPSDSLSVTSSSRGGYGGRQHTPAQSFADRLAQRKTTNLPERNSNVRRSFNGTDNHIRFLQQRMPTLEHTTKSFLRNWRIESYLNDHSEAAPDSNGSAPADRFEGYEGHENLKASALYTHSRLRSSLVFKPTLPEQQEANSCTTDSSNSTVVGSQGSDTPKKIPDTPTGAQLMTDKPPEEATPKSSLHPEAPKMHTLQVPESHPPALNPTTNGPTESNNYLYTTLCANKQTENPKNQQNENLLKRRSFPFFDHSKANMDHGNSKHYVYSTLTRNPVRQPEKLKEDLLKSSKSMHSMTHGVEEEEEGEEEVPKGDPPSGTGNKSISMAALLDVNKEEPNKEVTSKKEVKGSPSFLKKGSQKLRSLLSLAPEKKDNLSKNKAPAFYRMCSSSDTLISEAEENQKQKKSEPKNDSSPRRKHSSSSNSPGSIHKSKEDVAVHSPKRIHSPSDESNKTIASSGPAESKFSERAGDASAPRFNTEQIQYRDSKEIKAVVAPERKPTSSPRAKPNDELLRTHSIERRVYSRFEPFCKIESSIQPTSNMPNSSTHRPEVKSSTMGNSYGRSSPMLNYNTGVYHSFQPNENKFRGFMQKFGNFIHKNK
SIO_010081: FAM83B
subclass of: SO_0000673
so part of: FAM83B
location: join(1015294..1015737,1080853..1081017,1081684..1081808,1086051..1088361)
location: region:1015294-1088361:1
so has part: feature:1015294-1015737:1:exon
so has part: feature:1080853-1081017:1:exon
so has part: feature:1081684-1081808:1:exon
so has part: feature:1086051-1088361:1:exon

XP_019841931.1
type: Protein
SIO_000068: ncbiprotein

position:1015294:1
position: 1015294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088361:1
position: 1088361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1015294-1015737:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080853-1081017:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1081684-1081808:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086051-1088361:1:exon

HCRTR2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: HCRTR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1302941..1436020
location: region:1302941-1436020:1
so has part: feature:1302941-1436020:1:exon
subclass of: SO_0000010

109576846
type: Gene
SIO_000068: ncbigene

position:1302941:1
position: 1302941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436020:1
position: 1436020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1302941-1436020:1:exon

HCRTR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: HCRTR2
product: hypocretin receptor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 11 Proteins
transcript id: XM_019985477.1
SIO_010081: HCRTR2
subclass of: SO_0000673
so part of: HCRTR2
location: join(1302941..1303422,1397291..1397469,1404863..1405106,1418677..1418792,1428428..1428648,1431326..1431447,1434819..1436020)
location: region:1302941-1436020:1
so has part: feature:1302941-1303422:1:exon
so has part: feature:1397291-1397469:1:exon
so has part: feature:1404863-1405106:1:exon
so has part: feature:1418677-1418792:1:exon
so has part: feature:1428428-1428648:1:exon
so has part: feature:1431326-1431447:1:exon
so has part: feature:1434819-1436020:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1302941-1303422:1:exon

position:1303422:1
position: 1303422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1397291-1397469:1:exon

position:1397291:1
position: 1397291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1397469:1
position: 1397469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1404863-1405106:1:exon

position:1404863:1
position: 1404863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405106:1
position: 1405106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1418677-1418792:1:exon

position:1418677:1
position: 1418677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1418792:1
position: 1418792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1428428-1428648:1:exon

position:1428428:1
position: 1428428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428648:1
position: 1428648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1431326-1431447:1:exon

position:1431326:1
position: 1431326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431447:1
position: 1431447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1434819-1436020:1:exon

position:1434819:1
position: 1434819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HCRTR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: HCRTR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: orexin receptor type 2
translation: MSGTKLEDSPPCRNWSSAPELNETQEPFLNPTDYDDEEFLRYLWREYLHPKEYEWVLIAGYIIVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATLVVDITETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVIIWIVSCVIMIPQAIVMECSTMLPGLANKTALFTVCDERWGGEIYPKMYHICFFLVTYMAPLCLMVLAYLQIFRKLWCRQIPGTSSVVQRKWKALQPLSQPRGPGQQTKSRISAXAAEIKQIRARRKTARMLMVVLLVFAICYLPISILNVLKRVFGMFTHTEDRETVYAWFTFAHWLVYANSAANPIIYNFLSGKFREEFKAAFSCCCLGVHHRQEDRLARGRTSTESRKSLTTQISNFDNVSKLSEQVVLTSISTLPAANGAGPLQNW
SIO_010081: HCRTR2
subclass of: SO_0000673
so part of: HCRTR2
location: join(1303200..1303422,1397291..1397469,1404863..1405106,1418677..1418792,1428428..1428648,1431326..1431447,1434819..1435048)
location: region:1303200-1435048:1
so has part: feature:1303200-1303422:1:exon
so has part: feature:1397291-1397469:1:exon
so has part: feature:1404863-1405106:1:exon
so has part: feature:1418677-1418792:1:exon
so has part: feature:1428428-1428648:1:exon
so has part: feature:1431326-1431447:1:exon
so has part: feature:1434819-1435048:1:exon

XP_019841036.1
type: Protein
SIO_000068: ncbiprotein

position:1303200:1
position: 1303200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1435048:1
position: 1435048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1303200-1303422:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397291-1397469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1404863-1405106:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1418677-1418792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1428428-1428648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1431326-1431447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1434819-1435048:1:exon

GFRAL
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: GFRAL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1465656..1539803
location: region:1465656-1539803:1
so has part: feature:1465656-1539803:1:exon
subclass of: SO_0000010

109577447
type: Gene
SIO_000068: ncbigene

position:1465656:1
position: 1465656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1539803:1
position: 1539803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1465656-1539803:1:exon

GFRAL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: GFRAL
product: GDNF family receptor alpha like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986376.1
SIO_010081: GFRAL
subclass of: SO_0000673
so part of: GFRAL
location: join(1465656..1465677,1470115..1470246,1476924..1477082,1489172..1489228,1489957..1490287,1496213..1496463,1539452..1539547,1539676..1539803)
location: region:1465656-1539803:1
so has part: feature:1465656-1465677:1:exon
so has part: feature:1470115-1470246:1:exon
so has part: feature:1476924-1477082:1:exon
so has part: feature:1489172-1489228:1:exon
so has part: feature:1489957-1490287:1:exon
so has part: feature:1496213-1496463:1:exon
so has part: feature:1539452-1539547:1:exon
so has part: feature:1539676-1539803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1465656-1465677:1:exon

position:1465677:1
position: 1465677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1470115-1470246:1:exon

position:1470115:1
position: 1470115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470246:1
position: 1470246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1476924-1477082:1:exon

position:1476924:1
position: 1476924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1477082:1
position: 1477082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1489172-1489228:1:exon

position:1489172:1
position: 1489172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1489228:1
position: 1489228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1489957-1490287:1:exon

position:1489957:1
position: 1489957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1490287:1
position: 1490287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1496213-1496463:1:exon

position:1496213:1
position: 1496213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1496463:1
position: 1496463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1539452-1539547:1:exon

position:1539452:1
position: 1539452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1539547:1
position: 1539547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1539676-1539803:1:exon

position:1539676:1
position: 1539676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GFRAL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: GFRAL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GDNF family receptor alpha-like
translation: MIVFVFFAVGLCLNKSASQTTDCTYLRELCLSDADGCKHAWRIMEDACNVSDPGNTCQMKNSSSCDLSIQSLVESNLQFKDCLCSDDLYCTFNKLLGKKCINESDNIKEDNKYKWNLTTLSYHGGRGVQSCLEVAEVCIGDALCNAQLALYLKACSADGKLCDVKHCQAAIRFFYQNMPFNIAQMLAFCDCAPADEPCQQSREALHSRPCAVNRXPTPTCLDVIHSCQDDELCRRRYRIFQAKCWQHVMRKCHEDETCIGTLSKQDLACSGSDDCKAAYIGTLGTVLQGQCTCRTITQSEESLCKTFQHMLHRKSCFNYPTLSKVKGIALQKGKHAKEITLSGFHPSFNGEVIYGVVCVTATCGILLLLMVKLR
SIO_010081: GFRAL
subclass of: SO_0000673
so part of: GFRAL
location: join(1465656..1465677,1470115..1470246,1476924..1477082,1489172..1489228,1489957..1490287,1496213..1496463,1539452..1539547,1539676..1539752)
location: region:1465656-1539752:1
so has part: feature:1465656-1465677:1:exon
so has part: feature:1470115-1470246:1:exon
so has part: feature:1476924-1477082:1:exon
so has part: feature:1489172-1489228:1:exon
so has part: feature:1489957-1490287:1:exon
so has part: feature:1496213-1496463:1:exon
so has part: feature:1539452-1539547:1:exon
so has part: feature:1539676-1539752:1:exon

XP_019841935.1
type: Protein
SIO_000068: ncbiprotein

position:1539752:1
position: 1539752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1465656-1465677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1470115-1470246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1476924-1477082:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1489172-1489228:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1489957-1490287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1496213-1496463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1539452-1539547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1539676-1539752:1:exon

LOC109577353
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1567865..1575206)
location: region:1567865-1575206:-1
so has part: feature:1567865-1575206:-1:exon
subclass of: SO_0000011

109577353
type: Gene
SIO_000068: ncbigene

position:1567865:-1
position: 1567865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575206:-1
position: 1575206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567865-1575206:-1:exon

LOC109577353
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109577353
product: uncharacterized LOC109577353
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 178 samples with support for all annotated introns
transcript id: XR_002183533.1
SIO_010081: LOC109577353
subclass of: SO_0000673
so part of: LOC109577353
location: complement(join(1567865..1570368,1574752..1575206))
location: region:1567865-1575206:-1
so has part: feature:1574752-1575206:-1:exon
so has part: feature:1567865-1570368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1574752-1575206:-1:exon

position:1574752:-1
position: 1574752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1567865-1570368:-1:exon

position:1570368:-1
position: 1570368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HMGCLL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: HMGCLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1629850..1767357)
location: region:1629850-1767357:-1
so has part: feature:1629850-1767357:-1:exon
subclass of: SO_0000010

109576535
type: Gene
SIO_000068: ncbigene

position:1629850:-1
position: 1629850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1767357:-1
position: 1767357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1629850-1767357:-1:exon

HMGCLL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: HMGCLL1
product: 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019985172.1
SIO_010081: HMGCLL1
subclass of: SO_0000673
so part of: HMGCLL1
location: complement(join(1629850..1629981,1633933..1634057,1636367..1636526,1640516..1640579,1662300..1662448,1665085..1665180,1695846..1695953,1696181..1696260,1767147..1767357))
location: region:1629850-1767357:-1
so has part: feature:1767147-1767357:-1:exon
so has part: feature:1696181-1696260:-1:exon
so has part: feature:1695846-1695953:-1:exon
so has part: feature:1665085-1665180:-1:exon
so has part: feature:1662300-1662448:-1:exon
so has part: feature:1640516-1640579:-1:exon
so has part: feature:1636367-1636526:-1:exon
so has part: feature:1633933-1634057:-1:exon
so has part: feature:1629850-1629981:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1767147-1767357:-1:exon

position:1767147:-1
position: 1767147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1696181-1696260:-1:exon

position:1696181:-1
position: 1696181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696260:-1
position: 1696260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1695846-1695953:-1:exon

position:1695846:-1
position: 1695846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1695953:-1
position: 1695953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1665085-1665180:-1:exon

position:1665085:-1
position: 1665085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1665180:-1
position: 1665180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1662300-1662448:-1:exon

position:1662300:-1
position: 1662300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1662448:-1
position: 1662448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1640516-1640579:-1:exon

position:1640516:-1
position: 1640516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1640579:-1
position: 1640579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1636367-1636526:-1:exon

position:1636367:-1
position: 1636367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1636526:-1
position: 1636526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1633933-1634057:-1:exon

position:1633933:-1
position: 1633933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1634057:-1
position: 1634057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1629850-1629981:-1:exon

position:1629981:-1
position: 1629981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HMGCLL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: HMGCLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic
translation: MGNVPCAVKHCLSYQQLLREHLWIGDSVAGALEPAQESAQVSGFPEYVKIVEVGPRDGLQNEKVIVPTDIKIEFINQLSQTGLSVIEVTSFVSSRWIPQMADHTEVMKGIHQYPGIRYPVLTPNLQGFHRAVAAGATEVSVFGAASESFSKKNINCSIEESMKKFEEVVKSARHMNIPARGYVSCALGCPYEGNITLQKVTEVSKRLYGMGCYEISLGDTIGVGTPGSMKKMLESVMKEIPPRALAVHCHDTTDNTPSICGRRGARKVRLEPGGGLSPELDVESVCKQTEERVRAASNAYLTKNILTAVNKSRLLIMLINHVILFVTPVVSLYLTVHTVR
SIO_010081: HMGCLL1
subclass of: SO_0000673
so part of: HMGCLL1
location: complement(join(1629850..1629981,1633933..1634057,1636367..1636526,1640516..1640579,1662300..1662448,1665085..1665180,1695846..1695953,1696181..1696260,1767147..1767255))
location: region:1629850-1767255:-1
so has part: feature:1767147-1767255:-1:exon
so has part: feature:1696181-1696260:-1:exon
so has part: feature:1695846-1695953:-1:exon
so has part: feature:1665085-1665180:-1:exon
so has part: feature:1662300-1662448:-1:exon
so has part: feature:1640516-1640579:-1:exon
so has part: feature:1636367-1636526:-1:exon
so has part: feature:1633933-1634057:-1:exon
so has part: feature:1629850-1629981:-1:exon

XP_019840731.1
type: Protein
SIO_000068: ncbiprotein

position:1767255:-1
position: 1767255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1767147-1767255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1696181-1696260:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695846-1695953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1665085-1665180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1662300-1662448:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1640516-1640579:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1636367-1636526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1633933-1634057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1629850-1629981:-1:exon

BMP5
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: BMP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1940823..>1988972)
location: region:1940823-1988972:-1
so has part: feature:1940823-1988972:-1:exon
subclass of: SO_0000010

109576536
type: Gene
SIO_000068: ncbigene

position:1940823:-1
position: 1940823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1988972:-1
position: 1988972
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1940823-1988972:-1:exon

BMP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BMP5
product: bone morphogenetic protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 206 samples with support for all annotated introns
transcript id: XM_019985173.1
SIO_010081: BMP5
subclass of: SO_0000673
so part of: BMP5
location: complement(join(1940823..1942657,1946712..1946822,1948693..1948769,1965112..1965306,1988774..>1988972))
location: region:1940823-1988972:-1
so has part: feature:1988774-1988972:-1:exon
so has part: feature:1965112-1965306:-1:exon
so has part: feature:1948693-1948769:-1:exon
so has part: feature:1946712-1946822:-1:exon
so has part: feature:1940823-1942657:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1988774-1988972:-1:exon

position:1988774:-1
position: 1988774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1965112-1965306:-1:exon

position:1965112:-1
position: 1965112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1965306:-1
position: 1965306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1948693-1948769:-1:exon

position:1948693:-1
position: 1948693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1948769:-1
position: 1948769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1946712-1946822:-1:exon

position:1946712:-1
position: 1946712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946822:-1
position: 1946822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1940823-1942657:-1:exon

position:1942657:-1
position: 1942657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BMP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: BMP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bone morphogenetic protein 5
translation: FSLKPVTVFVVVFFLLRDADLFLLDTRKTQALDVGWLVFDITVTSNHWVINPQNNLGLQLCAETGDGHSINVKSAGLVGRHGPQSKQPFMVAFFKASEVLLRSVRAANKRKNQNRNKSGSHQDSSRMSSVGDYNTSEQKQACKKHELYVSFRDLGWQDWIIAPEGYAAFYCDGECSFPLNAHMNATNHAIVQTLVHLMFPDHVPKPCCAPTKLNAISVLYFDDSSNVILKKYRNMVVRSCGCH
SIO_010081: BMP5
subclass of: SO_0000673
so part of: BMP5
location: complement(join(1942508..1942657,1946712..1946822,1948693..1948769,1965112..1965306,1988774..>1988972))
location: region:1942508-1988972:-1
so has part: feature:1988774-1988972:-1:exon
so has part: feature:1965112-1965306:-1:exon
so has part: feature:1948693-1948769:-1:exon
so has part: feature:1946712-1946822:-1:exon
so has part: feature:1942508-1942657:-1:exon

XP_019840732.1
type: Protein
SIO_000068: ncbiprotein

position:1942508:-1
position: 1942508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1988774-1988972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1965112-1965306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1948693-1948769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1946712-1946822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1942508-1942657:-1:exon

LOC109577332
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2299515..2422718)
location: region:2299515-2422718:-1
so has part: feature:2299515-2422718:-1:exon
subclass of: SO_0000010

109577332
type: Gene
SIO_000068: ncbigene

position:2299515:-1
position: 2299515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2422718:-1
position: 2422718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2299515-2422718:-1:exon

LOC109577332
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577332
product: collagen alpha-1(XXI) chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_019986242.1
SIO_010081: LOC109577332
subclass of: SO_0000673
so part of: LOC109577332
location: complement(join(2299515..2300796,2302669..2302746,2304546..2304746,2305254..2305308,2305397..2305543,2306168..2306200,2311494..2311538,2313390..2313425,2315805..2315876,2317453..2317506,2320947..2321000,2322603..2322656,2324830..2324874,2348710..2348763,2372420..2372473,2372597..2372650,2373221..2373274,2373755..2373808,2393280..2393333,2393425..2393478,2413199..2413253,2422356..2422718))
location: region:2299515-2422718:-1
so has part: feature:2422356-2422718:-1:exon
so has part: feature:2413199-2413253:-1:exon
so has part: feature:2393425-2393478:-1:exon
so has part: feature:2393280-2393333:-1:exon
so has part: feature:2373755-2373808:-1:exon
so has part: feature:2373221-2373274:-1:exon
so has part: feature:2372597-2372650:-1:exon
so has part: feature:2372420-2372473:-1:exon
so has part: feature:2348710-2348763:-1:exon
so has part: feature:2324830-2324874:-1:exon
so has part: feature:2322603-2322656:-1:exon
so has part: feature:2320947-2321000:-1:exon
so has part: feature:2317453-2317506:-1:exon
so has part: feature:2315805-2315876:-1:exon
so has part: feature:2313390-2313425:-1:exon
so has part: feature:2311494-2311538:-1:exon
so has part: feature:2306168-2306200:-1:exon
so has part: feature:2305397-2305543:-1:exon
so has part: feature:2305254-2305308:-1:exon
so has part: feature:2304546-2304746:-1:exon
so has part: feature:2302669-2302746:-1:exon
so has part: feature:2299515-2300796:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2422356-2422718:-1:exon

position:2422356:-1
position: 2422356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2413199-2413253:-1:exon

position:2413199:-1
position: 2413199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2413253:-1
position: 2413253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2393425-2393478:-1:exon

position:2393425:-1
position: 2393425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393478:-1
position: 2393478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2393280-2393333:-1:exon

position:2393280:-1
position: 2393280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393333:-1
position: 2393333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2373755-2373808:-1:exon

position:2373755:-1
position: 2373755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2373808:-1
position: 2373808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2373221-2373274:-1:exon

position:2373221:-1
position: 2373221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2373274:-1
position: 2373274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2372597-2372650:-1:exon

position:2372597:-1
position: 2372597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2372650:-1
position: 2372650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2372420-2372473:-1:exon

position:2372420:-1
position: 2372420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2372473:-1
position: 2372473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2348710-2348763:-1:exon

position:2348710:-1
position: 2348710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2348763:-1
position: 2348763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2324830-2324874:-1:exon

position:2324830:-1
position: 2324830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2324874:-1
position: 2324874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2322603-2322656:-1:exon

position:2322603:-1
position: 2322603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2322656:-1
position: 2322656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2320947-2321000:-1:exon

position:2320947:-1
position: 2320947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2321000:-1
position: 2321000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2317453-2317506:-1:exon

position:2317453:-1
position: 2317453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2317506:-1
position: 2317506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2315805-2315876:-1:exon

position:2315805:-1
position: 2315805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2315876:-1
position: 2315876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2313390-2313425:-1:exon

position:2313390:-1
position: 2313390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2313425:-1
position: 2313425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2311494-2311538:-1:exon

position:2311494:-1
position: 2311494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2311538:-1
position: 2311538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2306168-2306200:-1:exon

position:2306168:-1
position: 2306168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2306200:-1
position: 2306200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2305397-2305543:-1:exon

position:2305397:-1
position: 2305397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2305543:-1
position: 2305543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2305254-2305308:-1:exon

position:2305254:-1
position: 2305254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2305308:-1
position: 2305308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2304546-2304746:-1:exon

position:2304546:-1
position: 2304546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2304746:-1
position: 2304746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2302669-2302746:-1:exon

position:2302669:-1
position: 2302669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2302746:-1
position: 2302746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2299515-2300796:-1:exon

position:2300796:-1
position: 2300796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109577332
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXI) chain
translation: MGYQGIAGSPGVPGSPGIQGAQGLPGYKGEPGRDGEKGDRGLPGFPGLHGIPGSKGEMGPKGDKGAPGFYGKKGAKGEQGNXGFPGLPGRAGEPGRHGKDGLMGSPGFKGEAGPPGAPGQDGSRGEPGIPGFPGNQGLMGQKGDTGPPGPLGKKGAPGIPGLMGSDGSPGQPGAPGSKGTKGEPGLQGLPGASGLKGEPGAVGPPGEPGYLGLPGIQGKKGDKGNQGERGIQGQKGENGRPGIPGFQGIQGHHGAKGEMGEKGEPGARGATGAKGESGVDGQMGPPGPQGPPGQPGDPGPPGMDGKPGREFSEQFIRQVCTDVLRAQLPVLLQSGRIQSCDHCQPQHGSPGIPGPPGPMGPEGPRGFPGLPGRDGVPGLMGAPGRPGXKGLKGLPGRNGAKGSQGLGYPGAQGPPGPPGPEGPPGISKEGPPGDPGLPGKDGDHGKPGIQGQPGAPGICDPSLCFSVIVGRDPFRKGPNY
SIO_010081: LOC109577332
subclass of: SO_0000673
so part of: LOC109577332
location: complement(join(2300609..2300796,2302669..2302746,2304546..2304746,2305254..2305308,2305397..2305543,2306168..2306200,2311494..2311538,2313390..2313425,2315805..2315876,2317453..2317506,2320947..2321000,2322603..2322656,2324830..2324874,2348710..2348763,2372420..2372473,2372597..2372650,2373221..2373274,2373755..2373808,2393280..2393333,2393425..2393478,2413199..2413201))
location: region:2300609-2413201:-1
so has part: feature:2413199-2413201:-1:exon
so has part: feature:2393425-2393478:-1:exon
so has part: feature:2393280-2393333:-1:exon
so has part: feature:2373755-2373808:-1:exon
so has part: feature:2373221-2373274:-1:exon
so has part: feature:2372597-2372650:-1:exon
so has part: feature:2372420-2372473:-1:exon
so has part: feature:2348710-2348763:-1:exon
so has part: feature:2324830-2324874:-1:exon
so has part: feature:2322603-2322656:-1:exon
so has part: feature:2320947-2321000:-1:exon
so has part: feature:2317453-2317506:-1:exon
so has part: feature:2315805-2315876:-1:exon
so has part: feature:2313390-2313425:-1:exon
so has part: feature:2311494-2311538:-1:exon
so has part: feature:2306168-2306200:-1:exon
so has part: feature:2305397-2305543:-1:exon
so has part: feature:2305254-2305308:-1:exon
so has part: feature:2304546-2304746:-1:exon
so has part: feature:2302669-2302746:-1:exon
so has part: feature:2300609-2300796:-1:exon

XP_019841801.1
type: Protein
SIO_000068: ncbiprotein

position:2300609:-1
position: 2300609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2413201:-1
position: 2413201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2413199-2413201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2393425-2393478:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2393280-2393333:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2373755-2373808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2373221-2373274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2372597-2372650:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372420-2372473:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2348710-2348763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2324830-2324874:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2322603-2322656:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2320947-2321000:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2317453-2317506:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2315805-2315876:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2313390-2313425:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2311494-2311538:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2306168-2306200:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2305397-2305543:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2305254-2305308:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2304546-2304746:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2302669-2302746:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2300609-2300796:-1:exon

LOC109576537
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2427222..2540398)
location: region:2427222-2540398:-1
so has part: feature:2427222-2540398:-1:exon
subclass of: SO_0000010

109576537
type: Gene
SIO_000068: ncbigene

position:2427222:-1
position: 2427222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2540398:-1
position: 2540398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2427222-2540398:-1:exon

LOC109576537
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109576537
product: collagen alpha-1(XXI) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_019985174.1
SIO_010081: LOC109576537
subclass of: SO_0000673
so part of: LOC109576537
location: complement(join(2427222..2427528,2427968..2428136,2456340..2456891,2464535..2464646,2540327..2540398))
location: region:2427222-2540398:-1
so has part: feature:2540327-2540398:-1:exon
so has part: feature:2464535-2464646:-1:exon
so has part: feature:2456340-2456891:-1:exon
so has part: feature:2427968-2428136:-1:exon
so has part: feature:2427222-2427528:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2540327-2540398:-1:exon

position:2540327:-1
position: 2540327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2464535-2464646:-1:exon

position:2464535:-1
position: 2464535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2464646:-1
position: 2464646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2456340-2456891:-1:exon

position:2456340:-1
position: 2456340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2456891:-1
position: 2456891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2427968-2428136:-1:exon

position:2427968:-1
position: 2427968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2428136:-1
position: 2428136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2427222-2427528:-1:exon

position:2427528:-1
position: 2427528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109576537
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109576537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXI) chain-like
translation: MAHHITFLWIISILLLQNSVLAEDGEIRSSCRTAPTDLVFILDGSYSVGPENFEIVKKWLVNITKNFDIGPKFIQVGVVQYSDYPVLEIPLGSHESGENLMAAMESIHYLGGNTRTGKAIQFALDYLFAKSARFLTKIAVVLTDGKSQDEVKDAAEAARDSRITLFAIGVGSETEEAELRAIANKPSSTYVFYVEDYIAISKIREVMKQKLCEESVCPTRIPVAARDEKGFDILLGLGIKKKAKKRIQLLPTKIKGYEITSKVDLSEFTSNVFPEGLPPSYVFVSTQRFKVKKMWDLWRILTIDGRPQIAVTLNGVDKTLLFTTTSIINGSQVVTFADPRVKVKMPGYDCGIHGELASSWRVLGEESXNLT
SIO_010081: LOC109576537
subclass of: SO_0000673
so part of: LOC109576537
location: complement(join(2427222..2427528,2427968..2428136,2456340..2456891,2464535..2464622))
location: region:2427222-2464622:-1
so has part: feature:2464535-2464622:-1:exon
so has part: feature:2456340-2456891:-1:exon
so has part: feature:2427968-2428136:-1:exon
so has part: feature:2427222-2427528:-1:exon

XP_019840733.1
type: Protein
SIO_000068: ncbiprotein

position:2464622:-1
position: 2464622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2464535-2464622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2456340-2456891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2427968-2428136:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2427222-2427528:-1:exon

LOC109576538
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2797220..3311948)
location: region:2797220-3311948:-1
so has part: feature:2797220-3311948:-1:exon
subclass of: SO_0000010

109576538
type: Gene
SIO_000068: ncbigene

position:2797220:-1
position: 2797220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3311948:-1
position: 3311948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2797220-3311948:-1:exon

LOC109576538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109576538
product: dystonin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 117 ESTs, 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019985175.1
SIO_010081: LOC109576538
subclass of: SO_0000673
so part of: LOC109576538
location: complement(join(2797220..2798478,2799692..2799815,2803031..2803141,2803692..2803891,2806053..2806170,2809043..2809060,2810037..2810111,2810283..2810437,2812011..2812173,2813249..2813412,2815337..2815466,2816781..2816969,2817649..2817792,2822759..2822887,2823334..2823528,2825958..2826117,2827559..2827728,2829815..2829934,2832827..2833033,2833220..2833375,2834200..2834370,2837020..2837148,2837479..2837676,2840233..2840388,2840699..2840872,2843497..2843598,2845590..2845691,2845815..2845937,2847416..2847642,2848488..2848719,2849907..2850110,2855133..2855351,2857203..2857310,2857481..2857600,2869290..2869496,2870600..2870841,2872406..2872490,2873153..2873479,2873679..2873838,2877098..2877264,2879862..2880111,2881261..2881325,2881498..2881626,2900357..2901828,2903865..2904360,2905764..2905963,2908915..2909044,2909888..2910129,2910794..2910856,2913499..2913625,2914933..2915089,2917549..2917715,2920744..2921061,2922465..2922673,2928935..2929058,2934041..2934217,2938660..2939193,2940772..2940944,2942362..2942734,2943507..2943740,2945848..2946000,2955265..2955400,2958223..2958311,2960530..2960658,2970437..2970535,2971002..2971109,2971929..2972012,2972826..2972988,2974058..2974251,2975732..2975870,2977566..2977744,2978609..2978766,2979662..2979845,2980315..2980441,2980764..2980918,2981108..2981260,2981837..2981962,2983136..2983231,2985812..2985916,2985995..2986156,2986230..2986307,2986464..2986592,2986680..2987142,2988159..2988313,2988772..2988865,2991808..2991935,2992377..2992472,2994998..2995117,2998556..2998662,2998758..2998870,3025523..3025689,3048738..3048830,3051062..3051139,3053361..3053450,3091973..3092034,3208015..3208222,3208382..3208599,3255282..3255399,3255571..3255682,3255818..3255932,3267429..3267508,3270106..3270295,3272524..3272659,3310639..3310749,3310821..3310916,3311176..3311210,3311753..3311948))
location: region:2797220-3311948:-1
so has part: feature:3311753-3311948:-1:exon
so has part: feature:3311176-3311210:-1:exon
so has part: feature:3310821-3310916:-1:exon
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SIO_000300: 66
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urn:…
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LOC109576538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109576538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystonin-like
translation: MIAAAFLVLLRPYSIQCALFLLLLLLGTIATIIFFCCWHRRLQKARHPMKSVFSGRSRSRDAVLRSHHFRSEERSLAVAVSFLDHLEVAGSFQGAVRHPLLFTWTCKFVFLFTQKALHVLLGTSDDFCKVMMIVIRLYPQKVSFPAEAEKLLEGSYVPGELTGGGGPGEECLEGREKQDLAGEKLQPWRERRAPPGLQGGRCLVPRVSVWSRAALPLLAVCDGALSGAEATVFQDEIVVQAYRCTRMLQCPTMVDVFSVLGSLGRRIRDLLYLRVCLRRRRLRRGVRVPPEFYQSVQSAAARRPVSGGGRAGSVRKSWSLAGGETENGNPDPECGVHRPDGATXFPRRGLAVGVPXVSVSQTGQLAGKSPGQLAGKSXGQLPGKCGAHLEAAAARNGKSRSRPGGGARYYRFVTGRLWILASLLGQSSVSWWPDHRPHTWVPIFLEPELPRPCGWAWSRGPEKMSSGNASYRCSMSSSADFSDEDDFSQKSGSASPAPGDTLPWNLPKHERSKRKIHGGSVLDPAERAVLRIADERDKVQKKTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPREKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIHVTGESEDMSAKERLLLWTQQATEGYAGIRCENFTTCWRDGKLFNAIIHKYRPDLIDMNTVAVQSNLANLEHAFYVAEKIGVIRLLDPEDVDVSSPDEKSVITYVSSLYDAFPKVPEGGEGIGANDVEVKWIEYQNMVNYLVQWIRHHVATMSERTFPNNPVELKALYNQYLQFKETEIPPKETEKSKIKRLYKLLEIWIEFGRIKLLQGYHPNDIEKEWGKLIIAMLEREKALRPEVERLEMLQQIANRVQRGSVICEDKLLLARNALQSDSKRLESGLQFQNEAEIAGYILECENLLRQHVIDVQILIDGKYYQADQLVQRVAKLRDDIMALRNECSSVYSKGRVLTTEQTKLMISGISQSLNAGFAQTLNPSMNSGLTQGLTPSLTPSSVTSGLSSGLTSRLTPSVTPAYTPGFPSGLVPSFGSGGETSSLQTLKLMQIRKPLLKSSLLDQNLTEEEINMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLTYAEKLHRLENQYAKLLNTSRNQERHLDTLHNFVTRATNELIWLNEKEEEEVAYDWSERNTNIARKRDYHAELMRELDQKEETIKSVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHVKENSAYFEFFNDAKEATDYLRNLKDAIQRKYSCDRSSSIHKLEDLVQESMEEKEELLQYKSTVASLMGRAKTIVQLKPRNADCPLKTSLPIKAICDYRQIEITIFKDDECVLANNSHRAKWKVISPTGNEAMVPSVCFTVPPPNKEAVDLANRIEQQYQNVLTLWHESHINMKSVVSWHHLINEIDRIRASNVASIKTMLPGEHQQVLSNLQSRFEDFLEDSQESQIFSGSDITQLEKEVNVCKQYYQELLKSAEREEQEESAYNLYISEVRNLRLRLESCEDRLIRQIRTPLERDDLHESVFRISEQEKLKKELERLKDDLATITSKCEDFFSQAPASASTPALRSELSVVVQSMNHVYSMSSTYIEKLKTVNLVLKNTQAAEALVKLYETKLCEEEAVIADKNNIENLISTLKQWRSEVDEKREVFHELEDELQRAKTISDEMFKTYKERDLDFDWHKEKADQLVERWQNVHVQIDNRLRDLEGIGKSLKYYRDTYHLLDDWIQQVETTQKKIQENQPENSKALATQLNQQKMLVSEIEMKQSKMDECQKYAEQYSTAVKDYELQTMTYRAMVDSQQKSPVKRRRMQSSADLVIQEFMDLRTRYTALVTLMTQYIKFAGDSLKRLEEEEKSLEEEKKEHVEKVKELQKWVSNISKTLRDGEKAGKSSFSKQKISSEEISIKKEQLSEXLQGMQL…
SIO_010081: LOC109576538
subclass of: SO_0000673
so part of: LOC109576538
location: complement(join(2798216..2798478,2799692..2799815,2803031..2803141,2803692..2803891,2806053..2806170,2809043..2809060,2810037..2810111,2810283..2810437,2812011..2812173,2813249..2813412,2815337..2815466,2816781..2816969,2817649..2817792,2822759..2822887,2823334..2823528,2825958..2826117,2827559..2827728,2829815..2829934,2832827..2833033,2833220..2833375,2834200..2834370,2837020..2837148,2837479..2837676,2840233..2840388,2840699..2840872,2843497..2843598,2845590..2845691,2845815..2845937,2847416..2847642,2848488..2848719,2849907..2850110,2855133..2855351,2857203..2857310,2857481..2857600,2869290..2869496,2870600..2870841,2872406..2872490,2873153..2873479,2873679..2873838,2877098..2877264,2879862..2880111,2881261..2881325,2881498..2881626,2900357..2901828,2903865..2904360,2905764..2905963,2908915..2909044,2909888..2910129,2910794..2910856,2913499..2913625,2914933..2915089,2917549..2917715,2920744..2921061,2922465..2922673,2928935..2929058,2934041..2934217,2938660..2939193,2940772..2940944,2942362..2942734,2943507..2943740,2945848..2946000,2955265..2955400,2958223..2958311,2960530..2960658,2970437..2970535,2971002..2971109,2971929..2972012,2972826..2972988,2974058..2974251,2975732..2975870,2977566..2977744,2978609..2978766,2979662..2979845,2980315..2980441,2980764..2980918,2981108..2981260,2981837..2981962,2983136..2983231,2985812..2985916,2985995..2986156,2986230..2986307,2986464..2986592,2986680..2987142,2988159..2988313,2988772..2988865,2991808..2991935,2992377..2992472,2994998..2995117,2998556..2998662,2998758..2998870,3025523..3025689,3048738..3048830,3051062..3051139,3053361..3053450,3091973..3092034,3208015..3208222,3208382..3208599,3255282..3255399,3255571..3255682,3255818..3255932,3267429..3267508,3270106..3270295,3272524..3272659,3310639..3310749,3310821..3310916,3311176..3311210,3311753..3311933))
location: region:2798216-3311933:-1
so has part: feature:3311753-3311933:-1:exon
so has part: feature:3311176-3311210:-1:exon
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so has part: feature:2881498-2881626:-1:exon
so has part: feature:2881261-2881325:-1:exon

XP_019840734.1
type: Protein
SIO_000068: ncbiprotein

position:2798216:-1
position: 2798216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3311933:-1
position: 3311933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3311753-3311933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3311176-3311210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3310821-3310916:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3310639-3310749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3272524-3272659:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3270106-3270295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3267429-3267508:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3255818-3255932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3255571-3255682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3255282-3255399:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3208382-3208599:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3208015-3208222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3091973-3092034:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3053361-3053450:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3051062-3051139:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3048738-3048830:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3025523-3025689:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2998758-2998870:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2998556-2998662:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2994998-2995117:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2992377-2992472:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2991808-2991935:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2988772-2988865:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2988159-2988313:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2986680-2987142:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2986464-2986592:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2986230-2986307:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2985995-2986156:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2985812-2985916:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2983136-2983231:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2981837-2981962:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2981108-2981260:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2980764-2980918:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2980315-2980441:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2979662-2979845:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2978609-2978766:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2977566-2977744:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2975732-2975870:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2974058-2974251:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2972826-2972988:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2971929-2972012:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2971002-2971109:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2970437-2970535:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2960530-2960658:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2958223-2958311:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2955265-2955400:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2945848-2946000:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2943507-2943740:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2942362-2942734:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2940772-2940944:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2938660-2939193:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2934041-2934217:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2928935-2929058:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:2922465-2922673:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:2920744-2921061:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:2917549-2917715:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:2914933-2915089:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:2913499-2913625:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:2910794-2910856:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:2909888-2910129:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2908915-2909044:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:2905764-2905963:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:2903865-2904360:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:2900357-2901828:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:2881498-2881626:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:2881261-2881325:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:2879862-2880111:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:2877098-2877264:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:2873679-2873838:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:2873153-2873479:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:2872406-2872490:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:2870600-2870841:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:2869290-2869496:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:2857481-2857600:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:2857203-2857310:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:2855133-2855351:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:2849907-2850110:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:2848488-2848719:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:2847416-2847642:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:2845815-2845937:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:2845590-2845691:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:2843497-2843598:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:2840699-2840872:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:2840233-2840388:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:2837479-2837676:-1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:2837020-2837148:-1:exon

urn:…
SIO_000300: 87
SIO_000628: feature:2834200-2834370:-1:exon

urn:…
SIO_000300: 88
SIO_000628: feature:2833220-2833375:-1:exon

urn:…
SIO_000300: 89
SIO_000628: feature:2832827-2833033:-1:exon

urn:…
SIO_000300: 90
SIO_000628: feature:2829815-2829934:-1:exon

urn:…
SIO_000300: 91
SIO_000628: feature:2827559-2827728:-1:exon

urn:…
SIO_000300: 92
SIO_000628: feature:2825958-2826117:-1:exon

urn:…
SIO_000300: 93
SIO_000628: feature:2823334-2823528:-1:exon

urn:…
SIO_000300: 94
SIO_000628: feature:2822759-2822887:-1:exon

urn:…
SIO_000300: 95
SIO_000628: feature:2817649-2817792:-1:exon

urn:…
SIO_000300: 96
SIO_000628: feature:2816781-2816969:-1:exon

urn:…
SIO_000300: 97
SIO_000628: feature:2815337-2815466:-1:exon

urn:…
SIO_000300: 98
SIO_000628: feature:2813249-2813412:-1:exon

urn:…
SIO_000300: 99
SIO_000628: feature:2812011-2812173:-1:exon

urn:…
SIO_000300: 100
SIO_000628: feature:2810283-2810437:-1:exon

urn:…
SIO_000300: 101
SIO_000628: feature:2810037-2810111:-1:exon

urn:…
SIO_000300: 102
SIO_000628: feature:2809043-2809060:-1:exon

urn:…
SIO_000300: 103
SIO_000628: feature:2806053-2806170:-1:exon

urn:…
SIO_000300: 104
SIO_000628: feature:2803692-2803891:-1:exon

urn:…
SIO_000300: 105
SIO_000628: feature:2803031-2803141:-1:exon

urn:…
SIO_000300: 106
SIO_000628: feature:2799692-2799815:-1:exon

urn:…
SIO_000300: 107
SIO_000628: feature:2798216-2798478:-1:exon

LOC109576655
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2960754..2970430)
location: region:2960754-2970430:-1
so has part: feature:2960754-2970430:-1:exon
subclass of: SO_0000010

109576655
type: Gene
SIO_000068: ncbigene

position:2960754:-1
position: 2960754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2970430:-1
position: 2970430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2960754-2970430:-1:exon

LOC109576655
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109576655
product: plectin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_019985311.1
SIO_010081: LOC109576655
subclass of: SO_0000673
so part of: LOC109576655
location: complement(join(2960754..2963876,2964440..2970430))
location: region:2960754-2970430:-1
so has part: feature:2964440-2970430:-1:exon
so has part: feature:2960754-2963876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2964440-2970430:-1:exon

position:2964440:-1
position: 2964440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2960754-2963876:-1:exon

position:2963876:-1
position: 2963876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109576655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109576655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plectin-like
translation: MQRRQEASEQGVYSDLLQRQEATVRENRQLAGKITELEKVLAELERQKSRAEQELPRVREEAEDALRRQRRDAADIALQKVRAESEAQRYRRELQAVERDLRGFREQLAEHSAAQRALEERLTRKDCSLQELERQRGELMAELRRKKAHEAELLELMERMEKDLTFRKQAAEKQLEGKQKIDSEARRTVTEMQHPCRESAHPACPNAEAKDLKEQVDELMAANRRAEQDVXKLKCELGALQLEKTSSEEKARLLKEKLDETNKSLRCLKLELERKDQAEEGYSRQLQELGRQLSQTTGRAAEVRQEAADLTRMKHSYELELESLQQERGKLQREGDRISRTQAAAERSMQHLNSQVTSPQDSKVSSRERAWSCQRTSDNLKEQFEKSHAQLLQNIQAEKENNXKIQKLKEELERSNERADKLRHKVEELTRQNNQTKLTMQRIQAESADVVLEKQAIQQRCETLKLQADGFKDQLRTTTEHLHKQTKTEQDFQRRIKCLEEDLAQSQHLVSEFKQKCDQQDRIIQNTEKEVRSLSAELSASKEEKRLGEQTVQRQRAQVQDLNNRLKKVQDELHLKTLEEQVTHRKMVLFQEESEKFKRSAEEFRKKMEKLMDSKDITERDISGIQLDFVSLQRENSRAQENARLCETNIQELEKQLQQYRQQMHQGQDGQAHHYQKCRKLEEELVAQKREVENLKQKMDQQIKEHEHQLVVLQGEIQKKNTAIKPDPEMAGKEGPGPRDLPSTXPXSGVPLQRWTQEPQPSEERWQRWGAENVQKEVQGRPSGAPVEKEKIQQCYSEYFSQTSTELQITFDETNPIARLSEIEKLRDQALCNSRPAIRCQDDKYEIDLVTLLAPFEIAKSKQCAMRAEVTALKQEKNPAPGSDEWMLEGCRAAGGLKRDFLNKNSEPETFQNFDGDHACSVRDDEFHFQGLRHTVTARQLVEAKLLDMKTVEQLRLGLKTIEEVQKTLSKFLTKATSIAGLYLESTKEKISFSSAAKKIIIDKMMALAFLEAQAATGFIIDPVSGQTYSVEDAVLKGVVDPEFKIRLLEAEKAALGYPCSSKVLSVFQAMENRMVDRQRGKHILEVQIASGGVIDPTRGIRVPPEVALQQGLLNNAILQFLHEPSSNSRVFPNPNNKQALYYSELLRMCVFDVDSQCFLFPFGEKNISNLNVAKTHRIAVVDTRTGAELTAYEAFQRTLIEKSTYLELSGQQYQWKEATFYESYGQPCHMLTDAKTGLQFSISEAVEQGTIDKAAIKKYQEGLLTLTELADSLLSQLVPKKDVHSPIAGYWLTSSGERISVLKASRRNLIDRITALRCLEAQVSTGGIIDPLTGKRYRVAEALHRGLVDEGFAQQLRQCELVXTGVSHPVTNKVMSVVETVGANIISKDMGIRCLEFQYLTGGLMEPQAQSRLSIEEALQVGIIDVFIATKLKDQKSYVRNILCPQTKRKLTYKEALEKADFDFHTGLKLLEVSEPLMTGISSLYYSS
SIO_010081: LOC109576655
subclass of: SO_0000673
so part of: LOC109576655
location: complement(join(2961978..2963876,2964440..2967010))
location: region:2961978-2967010:-1
so has part: feature:2964440-2967010:-1:exon
so has part: feature:2961978-2963876:-1:exon

XP_019840870.1
type: Protein
SIO_000068: ncbiprotein

position:2961978:-1
position: 2961978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2967010:-1
position: 2967010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2964440-2967010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2961978-2963876:-1:exon

TRNAG-CCC
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TRNAG-CCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3130947..3131019
location: region:3130947-3131019:1
so has part: feature:3130947-3131019:1:exon
subclass of: SO_0000663

109577462
type: Gene
SIO_000068: ncbigene

position:3130947:1
position: 3130947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3131019:1
position: 3131019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3130947-3131019:1:exon

TRNAG-CCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9915
gene: TRNAG-CCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3130980..3130982,aa:Gly,seq:ccc)
SIO_010081: TRNAG-CCC
subclass of: SO_0000673
so part of: TRNAG-CCC
location: 3130947..3131019
location: region:3130947-3131019:1
so has part: feature:3130947-3131019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3130947-3131019:1:exon

BEND6
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: BEND6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3312814..3376643
location: region:3312814-3376643:1
so has part: feature:3312814-3376643:1:exon
subclass of: SO_0000010

109577418
type: Gene
SIO_000068: ncbigene

position:3312814:1
position: 3312814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3376643:1
position: 3376643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3312814-3376643:1:exon

BEND6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BEND6
product: BEN domain containing 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019986339.1
SIO_010081: BEND6
subclass of: SO_0000673
so part of: BEND6
location: join(3312814..3312860,3333403..3333607,3339031..3339208,3353040..3353260,3354754..3354946,3356819..3356955,3375402..3376643)
location: region:3312814-3376643:1
so has part: feature:3312814-3312860:1:exon
so has part: feature:3333403-3333607:1:exon
so has part: feature:3339031-3339208:1:exon
so has part: feature:3353040-3353260:1:exon
so has part: feature:3354754-3354946:1:exon
so has part: feature:3356819-3356955:1:exon
so has part: feature:3375402-3376643:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3312814-3312860:1:exon

position:3312860:1
position: 3312860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3333403-3333607:1:exon

position:3333403:1
position: 3333403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3333607:1
position: 3333607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3339031-3339208:1:exon

position:3339031:1
position: 3339031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3339208:1
position: 3339208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3353040-3353260:1:exon

position:3353040:1
position: 3353040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3353260:1
position: 3353260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3354754-3354946:1:exon

position:3354754:1
position: 3354754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3354946:1
position: 3354946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3356819-3356955:1:exon

position:3356819:1
position: 3356819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3356955:1
position: 3356955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3375402-3376643:1:exon

position:3375402:1
position: 3375402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BEND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: BEND6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 6
translation: MQKIFQTEETTDSQALRKGKRKRTEPMDSENVNSDPDKAQRDPYSGNAFLPGESSSEDEEPLAELSKEELCTKIKSLKQKLTNIRKENSRLRQSLVMLQVLPQAVTQFEELVGMAEALLKGGGTLSTSASTLWRAANNSSPDSFASTCSNSNSASSSPISLKAEEDHQTDEKQFKIEKWQIAXCNKSKPQKFINDLMQVLYTNEYMATHSLTGAKSSTSRDKAVKPAMNQNEVQEIIGITKQLFPSTDDVSIRRMIGQKLNNCTKKPNLSKTLSSQDIK
SIO_010081: BEND6
subclass of: SO_0000673
so part of: BEND6
location: join(3333488..3333607,3339031..3339208,3353040..3353260,3354754..3354946,3356819..3356946)
location: region:3333488-3356946:1
so has part: feature:3333488-3333607:1:exon
so has part: feature:3339031-3339208:1:exon
so has part: feature:3353040-3353260:1:exon
so has part: feature:3354754-3354946:1:exon
so has part: feature:3356819-3356946:1:exon

XP_019841898.1
type: Protein
SIO_000068: ncbiprotein

position:3333488:1
position: 3333488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3356946:1
position: 3356946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3333488-3333607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3339031-3339208:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3353040-3353260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3354754-3354946:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3356819-3356946:1:exon

LOC109576526
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576526
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3334197..3335190
location: region:3334197-3335190:1
so has part: feature:3334197-3335190:1:exon

109576526
type: Gene
SIO_000068: ncbigene

position:3334197:1
position: 3334197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3335190:1
position: 3335190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3334197-3335190:1:exon

LOC109576526
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576526
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109576526
subclass of: SO_0000673
so part of: LOC109576526
location: 3334197..3334574
location: region:3334197-3334574:1
so has part: feature:3334197-3334574:1:exon

position:3334574:1
position: 3334574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3334197-3334574:1:exon

LOC109576526
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576526
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109576526
subclass of: SO_0000673
so part of: LOC109576526
location: 3335095..3335190
location: region:3335095-3335190:1
so has part: feature:3335095-3335190:1:exon

position:3335095:1
position: 3335095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3335095-3335190:1:exon

LOC109576539
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3375243..3392671
location: region:3375243-3392671:1
so has part: feature:3375243-3392671:1:exon
subclass of: SO_0000010

109576539
type: Gene
SIO_000068: ncbigene

position:3375243:1
position: 3375243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3392671:1
position: 3392671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3375243-3392671:1:exon

LOC109576539
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109576539
product: uncharacterized LOC109576539
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019985176.1
SIO_010081: LOC109576539
subclass of: SO_0000673
so part of: LOC109576539
location: join(3375243..3375260,3375402..3375578,3391278..3391506,3391840..3392671)
location: region:3375243-3392671:1
so has part: feature:3375243-3375260:1:exon
so has part: feature:3375402-3375578:1:exon
so has part: feature:3391278-3391506:1:exon
so has part: feature:3391840-3392671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3375243-3375260:1:exon

position:3375260:1
position: 3375260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3375402-3375578:1:exon

position:3375578:1
position: 3375578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3391278-3391506:1:exon

position:3391278:1
position: 3391278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3391506:1
position: 3391506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3391840-3392671:1:exon

position:3391840:1
position: 3391840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109576539
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109576539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109576539
translation: MPELFRVSSVPETRAPSXVSLIPALAGDSAASLAVSTGTGAGTGREALGTPLAVLLEHKLTKKLHLLRRGWPSGLQFPEALKAGEEAGAVQGRLGAGTLAGXLCRARLAVFSAVVAATTAGDGRRRVGNAWWAGSGLEPESAGPEASESAVEENEDDIQFVSVSSSGVWVFPSQRLCGTSHDVISPRLFTHRPANVWTSHTDWTLWSRAQEWISDWTPWSRTQERVSEWTPWSRTQERVPVDTVEQDTGAGISGHRGAGHRSGYQSGHXGAGHRSGYQTGHRGAGHRSGYQTGQRGAGHRSGYQSGHRGAGHRSERLFLNHAETLGFLAPGGEEFNPGPETRLDCSELLCNSFIKX
SIO_010081: LOC109576539
subclass of: SO_0000673
so part of: LOC109576539
location: join(3375243..3375260,3375402..3375578,3391278..3391506,3391840..3392486)
location: region:3375243-3392486:1
so has part: feature:3375243-3375260:1:exon
so has part: feature:3375402-3375578:1:exon
so has part: feature:3391278-3391506:1:exon
so has part: feature:3391840-3392486:1:exon

XP_019840735.1
type: Protein
SIO_000068: ncbiprotein

position:3392486:1
position: 3392486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3375243-3375260:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3375402-3375578:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3391278-3391506:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3391840-3392486:1:exon

KIAA1586
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: KIAA1586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3395978..3400814
location: region:3395978-3400814:1
so has part: feature:3395978-3400814:1:exon
subclass of: SO_0000010

109577014
type: Gene
SIO_000068: ncbigene

position:3395978:1
position: 3395978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3400814:1
position: 3400814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3395978-3400814:1:exon

KIAA1586
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: KIAA1586
product: KIAA1586 ortholog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 7 bases in 6 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019985723.1
SIO_010081: KIAA1586
subclass of: SO_0000673
so part of: KIAA1586
location: 3395978..3400814
location: region:3395978-3400814:1
so has part: feature:3395978-3400814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3395978-3400814:1:exon

KIAA1586
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: KIAA1586
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 7 bases in 6 codons; deleted 1 base in 1 codon; substituted 6 bases at 6 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:3398751..3398753,aa:OTHER)
transl except: (pos:3398826..3398828,aa:OTHER)
transl except: (pos:3398978..3398980,aa:OTHER)
transl except: (pos:3399020..3399022,aa:OTHER)
transl except: (pos:3399611..3399613,aa:OTHER)
transl except: (pos:3400340..3400342,aa:OTHER)
product: LOW QUALITY PROTEIN: E3 SUMO-protein ligase KIAA1586 homolog
translation: MTGLFLHFLNAKKVKTDTESSDSNKNYCGLSKSKELDFKYAEQPIIEEKPSSSSKEKXDNLVLPDCWNEKQVVMFTEQYKWLEIKEGKLGCKDYSTVQHLGLKAEDHVHMSKEWIAYLVXPNGNYKTIRQASLRKKIKEHDVSKAHGKIQDXLKESINDSVSNLVHKXCNKNVDATVKVFKTVYSLVKHNRPXSDIAEAIELQEEMGXRIAVHAAKEMKMTIFKDIIEEXAKICLIVDEASXVXKKRTLVIYVQYTVXSAPAPVMLFVTLKELVSATVECIFSTLSSTLNDCGFTNEYLKANLIAFYPDGANTMLGRKSGVATKSLENXPEIIIWNCLNHRLHLSLEDSISEIKQVNHLKIFLDKSCXNYHPPNKNQNKLLGNVPKDLEVELVKIGQVKGPKQAFCSLQPATAVWNAYPVXYLHFSHSHSGLAKRLPNIQYLVKPLMIDILEEFXXLSTALQSSSTNIQKAQKLXKCTIKTLEILKIGTGKHESQIEGLIKSDKFKDIPFNRNNKLNALPRNXLLENIIQHMNLCLLSNRKYDESIFNYFDLPEPSTWPYEEITSPWITGEKKLFXCEILKFEIDLNDFGEFVNNXIKXNVSVPKTIQKANSTIVVSSEVVQKLKGFNLMNIICTRVRNSLTIDHISDLMTINLLEKELAGRDATAFVKSWSNCNHRLAIDTGVQQKSTRAYENQLALXNLKCIVLEFPCGPVVRTRCFHCCGLGSVPGRETKILQAGQK
SIO_010081: KIAA1586
subclass of: SO_0000673
so part of: KIAA1586
location: 3398252..3400468
location: region:3398252-3400468:1
so has part: feature:3398252-3400468:1:exon

XP_019841282.1
type: Protein
SIO_000068: ncbiprotein

position:3398252:1
position: 3398252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3400468:1
position: 3400468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3398252-3400468:1:exon

ZNF451
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ZNF451
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3423461..3511243
location: region:3423461-3511243:1
so has part: feature:3423461-3511243:1:exon
subclass of: SO_0000010

109577015
type: Gene
SIO_000068: ncbigene

position:3423461:1
position: 3423461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3511243:1
position: 3511243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3423461-3511243:1:exon

ZNF451
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF451
product: zinc finger protein 451, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_019985728.1
SIO_010081: ZNF451
subclass of: SO_0000673
so part of: ZNF451
location: join(3423461..3423710,3424073..3424156,3431972..3432052,3433475..3443698)
location: region:3423461-3443698:1
so has part: feature:3423461-3423710:1:exon
so has part: feature:3424073-3424156:1:exon
so has part: feature:3431972-3432052:1:exon
so has part: feature:3433475-3443698:1:exon

position:3443698:1
position: 3443698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3423461-3423710:1:exon

position:3423710:1
position: 3423710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3424073-3424156:1:exon

position:3424073:1
position: 3424073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3424156:1
position: 3424156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3431972-3432052:1:exon

position:3431972:1
position: 3431972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3432052:1
position: 3432052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3433475-3443698:1:exon

position:3433475:1
position: 3433475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF451
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF451
product: zinc finger protein 451, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_019985725.1
SIO_010081: ZNF451
subclass of: SO_0000673
so part of: ZNF451
location: join(3423601..3423710,3424073..3424156,3431972..3432052,3452962..3453081,3457413..3457524,3461673..3461823,3462947..3463073,3475316..3475469,3475954..3476101,3478483..3480065,3482166..3482309,3489149..3489279,3490136..3490322,3497122..3497190,3510421..3511243)
location: region:3423601-3511243:1
so has part: feature:3423601-3423710:1:exon
so has part: feature:3424073-3424156:1:exon
so has part: feature:3431972-3432052:1:exon
so has part: feature:3452962-3453081:1:exon
so has part: feature:3457413-3457524:1:exon
so has part: feature:3461673-3461823:1:exon
so has part: feature:3462947-3463073:1:exon
so has part: feature:3475316-3475469:1:exon
so has part: feature:3475954-3476101:1:exon
so has part: feature:3478483-3480065:1:exon
so has part: feature:3482166-3482309:1:exon
so has part: feature:3489149-3489279:1:exon
so has part: feature:3490136-3490322:1:exon
so has part: feature:3497122-3497190:1:exon
so has part: feature:3510421-3511243:1:exon

position:3423601:1
position: 3423601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3423601-3423710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3424073-3424156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3431972-3432052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3452962-3453081:1:exon

position:3452962:1
position: 3452962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3453081:1
position: 3453081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3457413-3457524:1:exon

position:3457413:1
position: 3457413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3457524:1
position: 3457524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3461673-3461823:1:exon

position:3461673:1
position: 3461673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3461823:1
position: 3461823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3462947-3463073:1:exon

position:3462947:1
position: 3462947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3463073:1
position: 3463073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3475316-3475469:1:exon

position:3475316:1
position: 3475316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3475469:1
position: 3475469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3475954-3476101:1:exon

position:3475954:1
position: 3475954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3476101:1
position: 3476101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3478483-3480065:1:exon

position:3478483:1
position: 3478483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3480065:1
position: 3480065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3482166-3482309:1:exon

position:3482166:1
position: 3482166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3482309:1
position: 3482309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3489149-3489279:1:exon

position:3489149:1
position: 3489149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3489279:1
position: 3489279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3490136-3490322:1:exon

position:3490136:1
position: 3490136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3490322:1
position: 3490322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3497122-3497190:1:exon

position:3497122:1
position: 3497122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3497190:1
position: 3497190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3510421-3511243:1:exon

position:3510421:1
position: 3510421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF451
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF451
product: zinc finger protein 451, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_019985727.1
SIO_010081: ZNF451
subclass of: SO_0000673
so part of: ZNF451
location: join(3423601..3423710,3424073..3424156,3431972..3432052,3452962..3453081,3457413..3457524,3461673..3461823,3462947..3463073,3475316..3475469,3475954..3476101,3478483..3480065,3482166..3482309,3489149..3489279,3490136..3490322,3510421..3511243)
location: region:3423601-3511243:1
so has part: feature:3423601-3423710:1:exon
so has part: feature:3424073-3424156:1:exon
so has part: feature:3431972-3432052:1:exon
so has part: feature:3452962-3453081:1:exon
so has part: feature:3457413-3457524:1:exon
so has part: feature:3461673-3461823:1:exon
so has part: feature:3462947-3463073:1:exon
so has part: feature:3475316-3475469:1:exon
so has part: feature:3475954-3476101:1:exon
so has part: feature:3478483-3480065:1:exon
so has part: feature:3482166-3482309:1:exon
so has part: feature:3489149-3489279:1:exon
so has part: feature:3490136-3490322:1:exon
so has part: feature:3510421-3511243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3423601-3423710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3424073-3424156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3431972-3432052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3452962-3453081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3457413-3457524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3461673-3461823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3462947-3463073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3475316-3475469:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3475954-3476101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3478483-3480065:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3482166-3482309:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3489149-3489279:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490136-3490322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3510421-3511243:1:exon

ZNF451
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF451
product: zinc finger protein 451, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_019985726.1
SIO_010081: ZNF451
subclass of: SO_0000673
so part of: ZNF451
location: join(3423601..3423710,3424073..3424156,3431972..3432052,3452962..3453081,3457413..3457524,3461673..3461823,3462947..3463073,3475316..3475469,3475954..3476101,3478483..3480065,3482166..3482309,3489149..3489279,3490136..3490322,3497122..3497190,3506164..3506659)
location: region:3423601-3506659:1
so has part: feature:3423601-3423710:1:exon
so has part: feature:3424073-3424156:1:exon
so has part: feature:3431972-3432052:1:exon
so has part: feature:3452962-3453081:1:exon
so has part: feature:3457413-3457524:1:exon
so has part: feature:3461673-3461823:1:exon
so has part: feature:3462947-3463073:1:exon
so has part: feature:3475316-3475469:1:exon
so has part: feature:3475954-3476101:1:exon
so has part: feature:3478483-3480065:1:exon
so has part: feature:3482166-3482309:1:exon
so has part: feature:3489149-3489279:1:exon
so has part: feature:3490136-3490322:1:exon
so has part: feature:3497122-3497190:1:exon
so has part: feature:3506164-3506659:1:exon

position:3506659:1
position: 3506659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3423601-3423710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3424073-3424156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3431972-3432052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3452962-3453081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3457413-3457524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3461673-3461823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3462947-3463073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3475316-3475469:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3475954-3476101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3478483-3480065:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3482166-3482309:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3489149-3489279:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490136-3490322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3497122-3497190:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3506164-3506659:1:exon

position:3506164:1
position: 3506164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF451
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF451
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 SUMO-protein ligase ZNF451 isoform X1
translation: MGDPGSEIIECIPPAGPEASESTVEENEDDIQFVSEGPLRPVLEYIDLVSSDDDEPSTSQREDKHKDHIDHQKDKVALTLARLARHVEVEKQQKEEKNRAFREKIDFQHAHGLQELEFIRGHSDTEAARLCVDQWLKMPGLKTGTINSGTKGSFRRGSQIRASGKPISCPIMHCNKEFDNGHLLLGHLKRFDHSPCDPTITLHGPFISSFACVVCYKNFVTQQQYRDHLFAKEAADDGHKNNLLPQIIQCFACPNCFLLFSSKDECLKHMSGKNHFHQSFKLGDDKAVAQPISFPSFAKKLLISLCKDVPFQVKCVACHQTLRSHMELTAHFRVRCRNAGPVALAEKSIAQVAEKFLLRGYCPHCNHVFVDETSTWNHKQNLGHKVRVINSMEESILLYCHSNEGNKPLSDLHLLQDGSKFSSLKRNMSSQESSSQDCSTVPKKKMNLGVKSLGGVVCFQKERSLVKTWFCECHQRFPSEDAVEKHVFSANTMCYKCVVCGKVCEDLGVIRLHMSRIHGGAHLNNFLFWCRTCKKELRRKEAIMAHVTEFHSGHRYFYETDEVAGDTSPSSSTVLVSDLTAENPSSALTIVDHSPANRPPRGKWQCRICEDMFDSQECVKQHCMSLTSHQFHRYSCTHCKKTFHKMETLQRHCQDEHNSEVKMKYFCGLCDLSFNVEDAFLTHYKEHHSTDYVFVSEKTEPSIKTESDFPVIETGNLLTCGCRESYLCKVNRREDHGRCLQTLLGQGRLWFRCGVCSATTQSLGDLHTHVRQAHADLETPPXXXIKCGTCTKAFQDPESAQQHFHTKHCSLRGPVGARLSAEPKSPPPARAERKPRQTADGLQTAEPDRAAEXELSGQSADEEVVELPDLDYLRTMTHIVFVDFDNWSNFFGHLPGHLNQGTFIWGFQGGNTNWKPPAHCKVYNYLNRIGCFFLHPRCSKRKDAADFAICMHAGRLDEQLPKQIPFTILSGDQGFLELENQFKKTQRPAHILNPHHLEGDMMCALLNSISDTTKECDSDDNLGIKSASVGEEFRSAEDVELEEAIRRSLEEM
SIO_010081: ZNF451
subclass of: SO_0000673
so part of: ZNF451
location: join(3423690..3423710,3424073..3424156,3431972..3432052,3452962..3453081,3457413..3457524,3461673..3461823,3462947..3463073,3475316..3475469,3475954..3476101,3478483..3480065,3482166..3482309,3489149..3489279,3490136..3490322,3497122..3497190,3510421..3510467)
location: region:3423690-3510467:1
so has part: feature:3423690-3423710:1:exon
so has part: feature:3424073-3424156:1:exon
so has part: feature:3431972-3432052:1:exon
so has part: feature:3452962-3453081:1:exon
so has part: feature:3457413-3457524:1:exon
so has part: feature:3461673-3461823:1:exon
so has part: feature:3462947-3463073:1:exon
so has part: feature:3475316-3475469:1:exon
so has part: feature:3475954-3476101:1:exon
so has part: feature:3478483-3480065:1:exon
so has part: feature:3482166-3482309:1:exon
so has part: feature:3489149-3489279:1:exon
so has part: feature:3490136-3490322:1:exon
so has part: feature:3497122-3497190:1:exon
so has part: feature:3510421-3510467:1:exon

XP_019841284.1
type: Protein
SIO_000068: ncbiprotein

position:3423690:1
position: 3423690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3510467:1
position: 3510467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3423690-3423710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3424073-3424156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3431972-3432052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3452962-3453081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3457413-3457524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3461673-3461823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3462947-3463073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3475316-3475469:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3475954-3476101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3478483-3480065:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3482166-3482309:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3489149-3489279:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490136-3490322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3497122-3497190:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3510421-3510467:1:exon

ZNF451
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF451
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 SUMO-protein ligase ZNF451 isoform X3
translation: MGDPGSEIIECIPPAGPEASESTVEENEDDIQFVSEGPLRPVLEYIDLVSSDDDEPSTSQREDKHKDHIDHQKDKVALTLARLARHVEVEKQQKEEKNRAFREKIDFQHAHGLQELEFIRGHSDTEAARLCVDQWLKMPGLKTGTINSGTKGSFRRGSQIRASGKPISCPIMHCNKEFDNGHLLLGHLKRFDHSPCDPTITLHGPFISSFACVVCYKNFVTQQQYRDHLFAKEAADDGHKNNLLPQIIQCFACPNCFLLFSSKDECLKHMSGKNHFHQSFKLGDDKAVAQPISFPSFAKKLLISLCKDVPFQVKCVACHQTLRSHMELTAHFRVRCRNAGPVALAEKSIAQVAEKFLLRGYCPHCNHVFVDETSTWNHKQNLGHKVRVINSMEESILLYCHSNEGNKPLSDLHLLQDGSKFSSLKRNMSSQESSSQDCSTVPKKKMNLGVKSLGGVVCFQKERSLVKTWFCECHQRFPSEDAVEKHVFSANTMCYKCVVCGKVCEDLGVIRLHMSRIHGGAHLNNFLFWCRTCKKELRRKEAIMAHVTEFHSGHRYFYETDEVAGDTSPSSSTVLVSDLTAENPSSALTIVDHSPANRPPRGKWQCRICEDMFDSQECVKQHCMSLTSHQFHRYSCTHCKKTFHKMETLQRHCQDEHNSEVKMKYFCGLCDLSFNVEDAFLTHYKEHHSTDYVFVSEKTEPSIKTESDFPVIETGNLLTCGCRESYLCKVNRREDHGRCLQTLLGQGRLWFRCGVCSATTQSLGDLHTHVRQAHADLETPPXXXIKCGTCTKAFQDPESAQQHFHTKHCSLRGPVGARLSAEPKSPPPARAERKPRQTADGLQTAEPDRAAEXELSGQSADEEVVELPDLDYLRTMTHIVFVDFDNWSNFFGHLPGHLNQGTFIWGFQGGNTNWKPPAHCKVYNYLNRIGCFFLHPRCSKRKDAADFAICMHAGRLDEQLPKQIPFTILSGDQGFLELENQFKKTQRPAHILNPHHLEGDMMCALLNSISDTTKDVELEEAIRRSLEEM
SIO_010081: ZNF451
subclass of: SO_0000673
so part of: ZNF451
location: join(3423690..3423710,3424073..3424156,3431972..3432052,3452962..3453081,3457413..3457524,3461673..3461823,3462947..3463073,3475316..3475469,3475954..3476101,3478483..3480065,3482166..3482309,3489149..3489279,3490136..3490322,3510421..3510467)
location: region:3423690-3510467:1
so has part: feature:3423690-3423710:1:exon
so has part: feature:3424073-3424156:1:exon
so has part: feature:3431972-3432052:1:exon
so has part: feature:3452962-3453081:1:exon
so has part: feature:3457413-3457524:1:exon
so has part: feature:3461673-3461823:1:exon
so has part: feature:3462947-3463073:1:exon
so has part: feature:3475316-3475469:1:exon
so has part: feature:3475954-3476101:1:exon
so has part: feature:3478483-3480065:1:exon
so has part: feature:3482166-3482309:1:exon
so has part: feature:3489149-3489279:1:exon
so has part: feature:3490136-3490322:1:exon
so has part: feature:3510421-3510467:1:exon

XP_019841286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3423690-3423710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3424073-3424156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3431972-3432052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3452962-3453081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3457413-3457524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3461673-3461823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3462947-3463073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3475316-3475469:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3475954-3476101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3478483-3480065:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3482166-3482309:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3489149-3489279:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490136-3490322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3510421-3510467:1:exon

ZNF451
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF451
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 SUMO-protein ligase ZNF451 isoform X2
translation: MGDPGSEIIECIPPAGPEASESTVEENEDDIQFVSEGPLRPVLEYIDLVSSDDDEPSTSQREDKHKDHIDHQKDKVALTLARLARHVEVEKQQKEEKNRAFREKIDFQHAHGLQELEFIRGHSDTEAARLCVDQWLKMPGLKTGTINSGTKGSFRRGSQIRASGKPISCPIMHCNKEFDNGHLLLGHLKRFDHSPCDPTITLHGPFISSFACVVCYKNFVTQQQYRDHLFAKEAADDGHKNNLLPQIIQCFACPNCFLLFSSKDECLKHMSGKNHFHQSFKLGDDKAVAQPISFPSFAKKLLISLCKDVPFQVKCVACHQTLRSHMELTAHFRVRCRNAGPVALAEKSIAQVAEKFLLRGYCPHCNHVFVDETSTWNHKQNLGHKVRVINSMEESILLYCHSNEGNKPLSDLHLLQDGSKFSSLKRNMSSQESSSQDCSTVPKKKMNLGVKSLGGVVCFQKERSLVKTWFCECHQRFPSEDAVEKHVFSANTMCYKCVVCGKVCEDLGVIRLHMSRIHGGAHLNNFLFWCRTCKKELRRKEAIMAHVTEFHSGHRYFYETDEVAGDTSPSSSTVLVSDLTAENPSSALTIVDHSPANRPPRGKWQCRICEDMFDSQECVKQHCMSLTSHQFHRYSCTHCKKTFHKMETLQRHCQDEHNSEVKMKYFCGLCDLSFNVEDAFLTHYKEHHSTDYVFVSEKTEPSIKTESDFPVIETGNLLTCGCRESYLCKVNRREDHGRCLQTLLGQGRLWFRCGVCSATTQSLGDLHTHVRQAHADLETPPXXXIKCGTCTKAFQDPESAQQHFHTKHCSLRGPVGARLSAEPKSPPPARAERKPRQTADGLQTAEPDRAAEXELSGQSADEEVVELPDLDYLRTMTHIVFVDFDNWSNFFGHLPGHLNQGTFIWGFQGGNTNWKPPAHCKVYNYLNRIGCFFLHPRCSKRKDAADFAICMHAGRLDEQLPKQIPFTILSGDQGFLELENQFKKTQRPAHILNPHHLEGDMMCALLNSISDTTKECDSDDNLGIKSASVGEEFRSAEGS
SIO_010081: ZNF451
subclass of: SO_0000673
so part of: ZNF451
location: join(3423690..3423710,3424073..3424156,3431972..3432052,3452962..3453081,3457413..3457524,3461673..3461823,3462947..3463073,3475316..3475469,3475954..3476101,3478483..3480065,3482166..3482309,3489149..3489279,3490136..3490322,3497122..3497190,3506164..3506171)
location: region:3423690-3506171:1
so has part: feature:3423690-3423710:1:exon
so has part: feature:3424073-3424156:1:exon
so has part: feature:3431972-3432052:1:exon
so has part: feature:3452962-3453081:1:exon
so has part: feature:3457413-3457524:1:exon
so has part: feature:3461673-3461823:1:exon
so has part: feature:3462947-3463073:1:exon
so has part: feature:3475316-3475469:1:exon
so has part: feature:3475954-3476101:1:exon
so has part: feature:3478483-3480065:1:exon
so has part: feature:3482166-3482309:1:exon
so has part: feature:3489149-3489279:1:exon
so has part: feature:3490136-3490322:1:exon
so has part: feature:3497122-3497190:1:exon
so has part: feature:3506164-3506171:1:exon

XP_019841285.1
type: Protein
SIO_000068: ncbiprotein

position:3506171:1
position: 3506171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3423690-3423710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3424073-3424156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3431972-3432052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3452962-3453081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3457413-3457524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3461673-3461823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3462947-3463073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3475316-3475469:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3475954-3476101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3478483-3480065:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3482166-3482309:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3489149-3489279:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490136-3490322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3497122-3497190:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3506164-3506171:1:exon

ZNF451
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF451
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 SUMO-protein ligase ZNF451 isoform X4
translation: MGDPGSEIIECIPPAGPEASESTVEENEDDIQFVSEGPLRPVLEYIDLVSSDDDEPSTSQRERMPESKAPSSESRRPEMCSGCRAPPPSGDSSSSSGRCASSPQRMVSHPSSVENPLETQRNDHSNSDIKISETETLEPSQNYQSLPPSPLLVPQESMASSEVEEGLPVESPASQHGRDALLYLQTQVAEMSRVIRDLQSRSCFRFHHSRTGEASSVPWDISTSREEQISAVEEEAECKSPSADDKGQPADPSQSSFTGLLKRMEQRGVIKRVTLQSEAEPCEGKPDCVTSKKRLVPPLHPLLKIATAEVFKDPADCHPSSFMGHRVYPVAKDTSPFQPNPPAGGPIVEALEHSRRGGTTSPLDSTSKEMEVMGCRFYHAASIAARAASYMAYMTQYQRKLWEDMEDLVHDPEFDRGKARCIISDGMDAGLWQLCTTRDIMDSVVRVMAMAIDYRRQAWLRLTSLTKKTQEKISHLPFDGTCLFGQDVNAVVAEENSVKENDYKDHSKYYNQHRCXYSHDQKAHYHSRGYSRGDWYRPRNHPYRHRKRADSPERHGYKN
SIO_010081: ZNF451
subclass of: SO_0000673
so part of: ZNF451
location: join(3423690..3423710,3424073..3424156,3431972..3432052,3433475..3434968)
location: region:3423690-3434968:1
so has part: feature:3423690-3423710:1:exon
so has part: feature:3424073-3424156:1:exon
so has part: feature:3431972-3432052:1:exon
so has part: feature:3433475-3434968:1:exon

XP_019841287.1
type: Protein
SIO_000068: ncbiprotein

position:3434968:1
position: 3434968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3423690-3423710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3424073-3424156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3431972-3432052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3433475-3434968:1:exon

BAG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: BAG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3515244..3525321
location: region:3515244-3525321:1
so has part: feature:3515244-3525321:1:exon
subclass of: SO_0000010

109577032
type: Gene
SIO_000068: ncbigene

position:3515244:1
position: 3515244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3525321:1
position: 3525321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3515244-3525321:1:exon

BAG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BAG2
product: BCL2 associated athanogene 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 59 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 264 samples with support for all annotated introns
transcript id: XM_019985760.1
SIO_010081: BAG2
subclass of: SO_0000673
so part of: BAG2
location: join(3515244..3515555,3522462..3522571,3523887..3525321)
location: region:3515244-3525321:1
so has part: feature:3515244-3515555:1:exon
so has part: feature:3522462-3522571:1:exon
so has part: feature:3523887-3525321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3515244-3515555:1:exon

position:3515555:1
position: 3515555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3522462-3522571:1:exon

position:3522462:1
position: 3522462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3522571:1
position: 3522571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3523887-3525321:1:exon

position:3523887:1
position: 3523887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BAG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: BAG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BAG family molecular chaperone regulator 2 isoform X2
translation: MAQARISAKANEGRFCRSSSMADRSSRLLESLDQLELRVEALREAATAVEQEKEVLLEMIHSIQNSQDMRQISDGEREELNLTANRLMGRTLTVEVSVETIRSPQQQESLKHATRIIDEVVSKFLDDLGNARSHLMSXYSACSSEVPAGPVDQKFQSIVIGCALEDQKKIKRRLETLLRNIENADKAIKLLEHSKGAASKTLQQNAEARFN
SIO_010081: BAG2
subclass of: SO_0000673
so part of: BAG2
location: join(3515443..3515555,3522462..3522571,3523887..3524299)
location: region:3515443-3524299:1
so has part: feature:3515443-3515555:1:exon
so has part: feature:3522462-3522571:1:exon
so has part: feature:3523887-3524299:1:exon

XP_019841319.1
type: Protein
SIO_000068: ncbiprotein

position:3515443:1
position: 3515443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3524299:1
position: 3524299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3515443-3515555:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3522462-3522571:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3523887-3524299:1:exon

BAG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BAG2
product: BCL2 associated athanogene 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_019985759.1
SIO_010081: BAG2
subclass of: SO_0000673
so part of: BAG2
location: join(3520787..3521403,3522462..3522571,3523887..3525321)
location: region:3520787-3525321:1
so has part: feature:3520787-3521403:1:exon
so has part: feature:3522462-3522571:1:exon
so has part: feature:3523887-3525321:1:exon

position:3520787:1
position: 3520787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3520787-3521403:1:exon

position:3521403:1
position: 3521403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3522462-3522571:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3523887-3525321:1:exon

BAG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: BAG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BAG family molecular chaperone regulator 2 isoform X1
translation: MAGTCARGLELGLIFILHKLVTYLLVALQTHRVLFSDDFTASFFSHCCVSVQVEALREAATAVEQEKEVLLEMIHSIQNSQDMRQISDGEREELNLTANRLMGRTLTVEVSVETIRSPQQQESLKHATRIIDEVVSKFLDDLGNARSHLMSXYSACSSEVPAGPVDQKFQSIVIGCALEDQKKIKRRLETLLRNIENADKAIKLLEHSKGAASKTLQQNAEARFN
SIO_010081: BAG2
subclass of: SO_0000673
so part of: BAG2
location: join(3521249..3521403,3522462..3522571,3523887..3524299)
location: region:3521249-3524299:1
so has part: feature:3521249-3521403:1:exon
so has part: feature:3522462-3522571:1:exon
so has part: feature:3523887-3524299:1:exon

XP_019841318.1
type: Protein
SIO_000068: ncbiprotein

position:3521249:1
position: 3521249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3521249-3521403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3522462-3522571:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3523887-3524299:1:exon

RAB23
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: RAB23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3525569..3545908)
location: region:3525569-3545908:-1
so has part: feature:3525569-3545908:-1:exon
subclass of: SO_0000010

109576541
type: Gene
SIO_000068: ncbigene

position:3525569:-1
position: 3525569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3545908:-1
position: 3545908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3525569-3545908:-1:exon

RAB23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RAB23
product: RAB23, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 13 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019985177.1
SIO_010081: RAB23
subclass of: SO_0000673
so part of: RAB23
location: complement(join(3525569..3528791,3530572..3530664,3532171..3532253,3534202..3534375,3536229..3536310,3537600..3537717,3540696..3540810,3545564..3545908))
location: region:3525569-3545908:-1
so has part: feature:3545564-3545908:-1:exon
so has part: feature:3540696-3540810:-1:exon
so has part: feature:3537600-3537717:-1:exon
so has part: feature:3536229-3536310:-1:exon
so has part: feature:3534202-3534375:-1:exon
so has part: feature:3532171-3532253:-1:exon
so has part: feature:3530572-3530664:-1:exon
so has part: feature:3525569-3528791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3545564-3545908:-1:exon

position:3545564:-1
position: 3545564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3540696-3540810:-1:exon

position:3540696:-1
position: 3540696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3540810:-1
position: 3540810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3537600-3537717:-1:exon

position:3537600:-1
position: 3537600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3537717:-1
position: 3537717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3536229-3536310:-1:exon

position:3536229:-1
position: 3536229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3536310:-1
position: 3536310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3534202-3534375:-1:exon

position:3534202:-1
position: 3534202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3534375:-1
position: 3534375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3532171-3532253:-1:exon

position:3532171:-1
position: 3532171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3532253:-1
position: 3532253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3530572-3530664:-1:exon

position:3530572:-1
position: 3530572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3530664:-1
position: 3530664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3525569-3528791:-1:exon

position:3528791:-1
position: 3528791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RAB23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-23
translation: MLEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQYVLGHFXLWVLVCEQCPMTVSEXRLQGYSALFTSLGTQGYFPQLCIKSPELLSDQTTFDQITRCTAISPGASSQCPEVALLDMVXSDPARASVRXVAHRCPCVKASLGALKQGSSEAWADEHPCSQCWRFCDLTGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTALVQNKIDLLDDSCIKNEEAEALAKKLKLRFYRTSVKEDLNVSEVFKYLAEKYLQKLKQQIAENPESMHSSSNKIGVFSTSAGSHLGQNSSTLNGGDVINLRPNRQRTKKNRNPFSSCSIP
SIO_010081: RAB23
subclass of: SO_0000673
so part of: RAB23
location: complement(join(3528652..3528791,3530572..3530664,3532171..3532253,3534202..3534375,3536229..3536310,3537600..3537717,3540696..3540810,3545564..3545790))
location: region:3528652-3545790:-1
so has part: feature:3545564-3545790:-1:exon
so has part: feature:3540696-3540810:-1:exon
so has part: feature:3537600-3537717:-1:exon
so has part: feature:3536229-3536310:-1:exon
so has part: feature:3534202-3534375:-1:exon
so has part: feature:3532171-3532253:-1:exon
so has part: feature:3530572-3530664:-1:exon
so has part: feature:3528652-3528791:-1:exon

XP_019840736.1
type: Protein
SIO_000068: ncbiprotein

position:3528652:-1
position: 3528652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3545790:-1
position: 3545790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3545564-3545790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3540696-3540810:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3537600-3537717:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3536229-3536310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3534202-3534375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3532171-3532253:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3530572-3530664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3528652-3528791:-1:exon

LOC109576527
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576527
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4000448..4006666
location: region:4000448-4006666:1
so has part: feature:4000448-4006666:1:exon

109576527
type: Gene
SIO_000068: ncbigene

position:4000448:1
position: 4000448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4006666:1
position: 4006666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4000448-4006666:1:exon

LOC109576527
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576527
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109576527
subclass of: SO_0000673
so part of: LOC109576527
location: 4000448..4000698
location: region:4000448-4000698:1
so has part: feature:4000448-4000698:1:exon

position:4000698:1
position: 4000698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4000448-4000698:1:exon

LOC109576527
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576527
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109576527
subclass of: SO_0000673
so part of: LOC109576527
location: 4006037..4006666
location: region:4006037-4006666:1
so has part: feature:4006037-4006666:1:exon

position:4006037:1
position: 4006037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4006037-4006666:1:exon

TRNAC-ACA
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TRNAC-ACA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(4044261..4044332)
location: region:4044261-4044332:-1
so has part: feature:4044261-4044332:-1:exon
subclass of: SO_0000663

109577506
type: Gene
SIO_000068: ncbigene

position:4044261:-1
position: 4044261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4044332:-1
position: 4044332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4044261-4044332:-1:exon

TRNAC-ACA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9915
gene: TRNAC-ACA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA cysteine (anticodon ACA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(4044297..4044299),aa:Cys, seq:aca)
SIO_010081: TRNAC-ACA
subclass of: SO_0000673
so part of: TRNAC-ACA
location: complement(4044261..4044332)
location: region:4044261-4044332:-1
so has part: feature:4044261-4044332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4044261-4044332:-1:exon

LOC109576528
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4093382..4096424
location: region:4093382-4096424:1
so has part: feature:4093382-4096424:1:exon

109576528
type: Gene
SIO_000068: ncbigene

position:4093382:1
position: 4093382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4096424:1
position: 4096424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4093382-4096424:1:exon

LOC109576528
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576528
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC109576528
subclass of: SO_0000673
so part of: LOC109576528
location: 4093382..4093809
location: region:4093382-4093809:1
so has part: feature:4093382-4093809:1:exon

position:4093809:1
position: 4093809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4093382-4093809:1:exon

LOC109576528
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576528
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC109576528
subclass of: SO_0000673
so part of: LOC109576528
location: 4094608..4094803
location: region:4094608-4094803:1
so has part: feature:4094608-4094803:1:exon

position:4094608:1
position: 4094608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4094803:1
position: 4094803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4094608-4094803:1:exon

LOC109576528
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576528
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC109576528
subclass of: SO_0000673
so part of: LOC109576528
location: 4095969..4096424
location: region:4095969-4096424:1
so has part: feature:4095969-4096424:1:exon

position:4095969:1
position: 4095969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4095969-4096424:1:exon

LOC109576542
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4249768..4252810
location: region:4249768-4252810:1
so has part: feature:4249768-4252810:1:exon

109576542
type: Gene
SIO_000068: ncbigene

position:4249768:1
position: 4249768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4252810:1
position: 4252810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4249768-4252810:1:exon

LOC109576542
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576542
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC109576542
subclass of: SO_0000673
so part of: LOC109576542
location: 4249768..4250195
location: region:4249768-4250195:1
so has part: feature:4249768-4250195:1:exon

position:4250195:1
position: 4250195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4249768-4250195:1:exon

LOC109576542
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576542
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC109576542
subclass of: SO_0000673
so part of: LOC109576542
location: 4250994..4251189
location: region:4250994-4251189:1
so has part: feature:4250994-4251189:1:exon

position:4250994:1
position: 4250994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4251189:1
position: 4251189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4250994-4251189:1:exon

LOC109576542
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576542
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC109576542
subclass of: SO_0000673
so part of: LOC109576542
location: 4252355..4252810
location: region:4252355-4252810:1
so has part: feature:4252355-4252810:1:exon

position:4252355:1
position: 4252355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4252355-4252810:1:exon

LOC109577460
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577460
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5312490..5312753
location: region:5312490-5312753:1
so has part: feature:5312490-5312753:1:exon

109577460
type: Gene
SIO_000068: ncbigene

position:5312490:1
position: 5312490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5312753:1
position: 5312753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5312490-5312753:1:exon

LOC109577460
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: LOC109577460
product: 40S ribosomal protein S8 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_002183553.1
SIO_010081: LOC109577460
so part of: LOC109577460
location: 5312490..5312753
location: region:5312490-5312753:1
so has part: feature:5312490-5312753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5312490-5312753:1:exon

LOC109576543
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6227931..6235525)
location: region:6227931-6235525:-1
so has part: feature:6227931-6235525:-1:exon

109576543
type: Gene
SIO_000068: ncbigene

position:6227931:-1
position: 6227931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6235525:-1
position: 6235525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6227931-6235525:-1:exon

LOC109576543
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109576543
subclass of: SO_0000673
so part of: LOC109576543
location: complement(6227931..6228322)
location: region:6227931-6228322:-1
so has part: feature:6227931-6228322:-1:exon

position:6228322:-1
position: 6228322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6227931-6228322:-1:exon

LOC109576543
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109576543
subclass of: SO_0000673
so part of: LOC109576543
location: complement(6228488..6229237)
location: region:6228488-6229237:-1
so has part: feature:6228488-6229237:-1:exon

position:6228488:-1
position: 6228488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6229237:-1
position: 6229237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6228488-6229237:-1:exon

LOC109576543
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109576543
subclass of: SO_0000673
so part of: LOC109576543
location: complement(6229303..6229328)
location: region:6229303-6229328:-1
so has part: feature:6229303-6229328:-1:exon

position:6229303:-1
position: 6229303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6229328:-1
position: 6229328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6229303-6229328:-1:exon

LOC109576543
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109576543
subclass of: SO_0000673
so part of: LOC109576543
location: complement(6230432..6230691)
location: region:6230432-6230691:-1
so has part: feature:6230432-6230691:-1:exon

position:6230432:-1
position: 6230432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6230691:-1
position: 6230691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6230432-6230691:-1:exon

LOC109576543
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109576543
subclass of: SO_0000673
so part of: LOC109576543
location: complement(6235469..6235525)
location: region:6235469-6235525:-1
so has part: feature:6235469-6235525:-1:exon

position:6235469:-1
position: 6235469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6235469-6235525:-1:exon

LOC109576544
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6518761..6520155)
location: region:6518761-6520155:-1
so has part: feature:6518761-6520155:-1:exon

109576544
type: Gene
SIO_000068: ncbigene

position:6518761:-1
position: 6518761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6520155:-1
position: 6520155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6518761-6520155:-1:exon

LOC109576544
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576544
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109576544
subclass of: SO_0000673
so part of: LOC109576544
location: complement(6518761..6520155)
location: region:6518761-6520155:-1
so has part: feature:6518761-6520155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6518761-6520155:-1:exon

LOC109576520
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6790941..6796141)
location: region:6790941-6796141:-1
so has part: feature:6790941-6796141:-1:exon
subclass of: SO_0000011

109576520
type: Gene
SIO_000068: ncbigene

position:6790941:-1
position: 6790941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6796141:-1
position: 6796141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6790941-6796141:-1:exon

LOC109576520
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109576520
product: uncharacterized LOC109576520
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_002183400.1
SIO_010081: LOC109576520
subclass of: SO_0000673
so part of: LOC109576520
location: complement(join(6790941..6791075,6794250..6794340,6795318..6796141))
location: region:6790941-6796141:-1
so has part: feature:6795318-6796141:-1:exon
so has part: feature:6794250-6794340:-1:exon
so has part: feature:6790941-6791075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6795318-6796141:-1:exon

position:6795318:-1
position: 6795318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6794250-6794340:-1:exon

position:6794250:-1
position: 6794250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6794340:-1
position: 6794340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6790941-6791075:-1:exon

position:6791075:-1
position: 6791075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LRRC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6803054..6946182)
location: region:6803054-6946182:-1
so has part: feature:6803054-6946182:-1:exon
subclass of: SO_0000010

109577312
type: Gene
SIO_000068: ncbigene

position:6803054:-1
position: 6803054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6946182:-1
position: 6946182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6803054-6946182:-1:exon

LRRC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LRRC1
product: leucine rich repeat containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 46 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_019986203.1
SIO_010081: LRRC1
subclass of: SO_0000673
so part of: LRRC1
location: complement(join(6803054..6804512,6806097..6806233,6807307..6807479,6815122..6815237,6825440..6825523,6827008..6827126,6829416..6829560,6841225..6841299,6841678..6841741,6842041..6842097,6855719..6855808,6859807..6859885,6895890..6896007,6945837..6946182))
location: region:6803054-6946182:-1
so has part: feature:6945837-6946182:-1:exon
so has part: feature:6895890-6896007:-1:exon
so has part: feature:6859807-6859885:-1:exon
so has part: feature:6855719-6855808:-1:exon
so has part: feature:6842041-6842097:-1:exon
so has part: feature:6841678-6841741:-1:exon
so has part: feature:6841225-6841299:-1:exon
so has part: feature:6829416-6829560:-1:exon
so has part: feature:6827008-6827126:-1:exon
so has part: feature:6825440-6825523:-1:exon
so has part: feature:6815122-6815237:-1:exon
so has part: feature:6807307-6807479:-1:exon
so has part: feature:6806097-6806233:-1:exon
so has part: feature:6803054-6804512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6945837-6946182:-1:exon

position:6945837:-1
position: 6945837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6895890-6896007:-1:exon

position:6895890:-1
position: 6895890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6896007:-1
position: 6896007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6859807-6859885:-1:exon

position:6859807:-1
position: 6859807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6859885:-1
position: 6859885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6855719-6855808:-1:exon

position:6855719:-1
position: 6855719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6855808:-1
position: 6855808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6842041-6842097:-1:exon

position:6842041:-1
position: 6842041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6842097:-1
position: 6842097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6841678-6841741:-1:exon

position:6841678:-1
position: 6841678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6841741:-1
position: 6841741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6841225-6841299:-1:exon

position:6841225:-1
position: 6841225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6841299:-1
position: 6841299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6829416-6829560:-1:exon

position:6829416:-1
position: 6829416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6829560:-1
position: 6829560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6827008-6827126:-1:exon

position:6827008:-1
position: 6827008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6827126:-1
position: 6827126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6825440-6825523:-1:exon

position:6825440:-1
position: 6825440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6825523:-1
position: 6825523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6815122-6815237:-1:exon

position:6815122:-1
position: 6815122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6815237:-1
position: 6815237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6807307-6807479:-1:exon

position:6807307:-1
position: 6807307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6807479:-1
position: 6807479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6806097-6806233:-1:exon

position:6806097:-1
position: 6806097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6806233:-1
position: 6806233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6803054-6804512:-1:exon

position:6804512:-1
position: 6804512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LRRC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 1
translation: MFHCIPLWRCNRHVETIDRRHCSLLYVPDEVYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCEXLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSRAAELHVLDVAGNRLSHLPLSLTALNLKALWLSDNQAQPLLTFQTDTDHTTGEKILTCVLLPQLPSEPACQENLPRCGALESLVHDVSEEAWNERAVNRVSAIRFLDDEKDDDDNETRTLLRRATPHPGELKSMKKTVENLRNDRNAAKGLDSNKNEVNHAVDRVTTSV
SIO_010081: LRRC1
subclass of: SO_0000673
so part of: LRRC1
location: complement(join(6804354..6804512,6806097..6806233,6807307..6807479,6815122..6815237,6825440..6825523,6827008..6827126,6829416..6829560,6841225..6841299,6841678..6841741,6842041..6842097,6855719..6855808,6859807..6859885,6895890..6896007,6945837..6945995))
location: region:6804354-6945995:-1
so has part: feature:6945837-6945995:-1:exon
so has part: feature:6895890-6896007:-1:exon
so has part: feature:6859807-6859885:-1:exon
so has part: feature:6855719-6855808:-1:exon
so has part: feature:6842041-6842097:-1:exon
so has part: feature:6841678-6841741:-1:exon
so has part: feature:6841225-6841299:-1:exon
so has part: feature:6829416-6829560:-1:exon
so has part: feature:6827008-6827126:-1:exon
so has part: feature:6825440-6825523:-1:exon
so has part: feature:6815122-6815237:-1:exon
so has part: feature:6807307-6807479:-1:exon
so has part: feature:6806097-6806233:-1:exon
so has part: feature:6804354-6804512:-1:exon

XP_019841762.1
type: Protein
SIO_000068: ncbiprotein

position:6804354:-1
position: 6804354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6945995:-1
position: 6945995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6945837-6945995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6895890-6896007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6859807-6859885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6855719-6855808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6842041-6842097:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6841678-6841741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6841225-6841299:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6829416-6829560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6827008-6827126:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6825440-6825523:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6815122-6815237:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6807307-6807479:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6806097-6806233:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6804354-6804512:-1:exon

KLHL31
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: KLHL31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7050225..7069972
location: region:7050225-7069972:1
so has part: feature:7050225-7069972:1:exon
subclass of: SO_0000010

109577037
type: Gene
SIO_000068: ncbigene

position:7050225:1
position: 7050225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7069972:1
position: 7069972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7050225-7069972:1:exon

KLHL31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: KLHL31
product: kelch like family member 31, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 204 samples with support for all annotated introns
transcript id: XM_019985766.1
SIO_010081: KLHL31
subclass of: SO_0000673
so part of: KLHL31
location: join(7050225..7050428,7062498..7063702,7065415..7069972)
location: region:7050225-7069972:1
so has part: feature:7050225-7050428:1:exon
so has part: feature:7062498-7063702:1:exon
so has part: feature:7065415-7069972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7050225-7050428:1:exon

position:7050428:1
position: 7050428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7062498-7063702:1:exon

position:7062498:1
position: 7062498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7063702:1
position: 7063702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7065415-7069972:1:exon

position:7065415:1
position: 7065415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLHL31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: KLHL31
product: kelch like family member 31, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 204 samples with support for all annotated introns
transcript id: XM_019985767.1
SIO_010081: KLHL31
subclass of: SO_0000673
so part of: KLHL31
location: join(7050225..7050428,7062502..7063702,7065415..7069972)
location: region:7050225-7069972:1
so has part: feature:7050225-7050428:1:exon
so has part: feature:7062502-7063702:1:exon
so has part: feature:7065415-7069972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7050225-7050428:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7062502-7063702:1:exon

position:7062502:1
position: 7062502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7065415-7069972:1:exon

KLHL31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: KLHL31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 31
translation: MAPKKKTVRKNKADVNEMTIIVEDSPLNKLNALNGLLEGGNGLSCISSELTDASYGPNLLEGLSKMRQEGFLCDLVISTKTKSFDVHKSVMASCSEYFYNILKKDPSTQRVDLNDIAPLGLATVIAYAYTGKLTLSLYTIGSIISAAVYLQIHTLVKMCSDFLIQEMSVENCMYIANIAETYSLRNAKAAAQKFIRDNFLEFAETDHFMKLTFEQINELLIDDDLQLPSEIVAFQIAMKWLEFDQKRVKYAADLLSNIRFGTISAQDLVNYVQSVPRMMQDADCHKLLVDAMNYHLLPYHQNTLQSRRTRIRGGCRVLVTVGGRPGLTEKSLSRDVLYRDPEIGWSKLTEMPAKSFNQCVAVMDGFLYVAGGEDQNDARNQAKHAVSNFCRYDPRFNTWIHLANMTQRRTHFSLSVFNGLLYAVGGRNAEGSLASLECYVPSANQWLPKAPLEVARCCHASAVAEGRVLVTGGYIGGAYSRSVCAYDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGVSTAGASVLHGRAYLLGGWNEGERKYKKCIQCFNPELNEWTEDDELPEATVGVSCCALAMPNPVTRESRASSVSSVPVSI
SIO_010081: KLHL31
subclass of: SO_0000673
so part of: KLHL31
location: join(7062531..7063702,7065415..7066147)
location: region:7062531-7066147:1
so has part: feature:7062531-7063702:1:exon
so has part: feature:7065415-7066147:1:exon

XP_019841325.1
type: Protein
SIO_000068: ncbiprotein

position:7062531:1
position: 7062531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7066147:1
position: 7066147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7062531-7063702:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7065415-7066147:1:exon

KLHL31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: KLHL31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 31
translation: MAPKKKTVRKNKADVNEMTIIVEDSPLNKLNALNGLLEGGNGLSCISSELTDASYGPNLLEGLSKMRQEGFLCDLVISTKTKSFDVHKSVMASCSEYFYNILKKDPSTQRVDLNDIAPLGLATVIAYAYTGKLTLSLYTIGSIISAAVYLQIHTLVKMCSDFLIQEMSVENCMYIANIAETYSLRNAKAAAQKFIRDNFLEFAETDHFMKLTFEQINELLIDDDLQLPSEIVAFQIAMKWLEFDQKRVKYAADLLSNIRFGTISAQDLVNYVQSVPRMMQDADCHKLLVDAMNYHLLPYHQNTLQSRRTRIRGGCRVLVTVGGRPGLTEKSLSRDVLYRDPEIGWSKLTEMPAKSFNQCVAVMDGFLYVAGGEDQNDARNQAKHAVSNFCRYDPRFNTWIHLANMTQRRTHFSLSVFNGLLYAVGGRNAEGSLASLECYVPSANQWLPKAPLEVARCCHASAVAEGRVLVTGGYIGGAYSRSVCAYDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGVSTAGASVLHGRAYLLGGWNEGERKYKKCIQCFNPELNEWTEDDELPEATVGVSCCALAMPNPVTRESRASSVSSVPVSI
SIO_010081: KLHL31
subclass of: SO_0000673
so part of: KLHL31
location: join(7062531..7063702,7065415..7066147)
location: region:7062531-7066147:1
so has part: feature:7062531-7063702:1:exon
so has part: feature:7065415-7066147:1:exon

XP_019841326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7062531-7063702:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7065415-7066147:1:exon

GCLC
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: GCLC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7202826..7246972
location: region:7202826-7246972:1
so has part: feature:7202826-7246972:1:exon
subclass of: SO_0000010

109577226
type: Gene
SIO_000068: ncbigene

position:7202826:1
position: 7202826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7246972:1
position: 7246972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7202826-7246972:1:exon

GCLC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: GCLC
product: glutamate-cysteine ligase catalytic subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_019986064.1
SIO_010081: GCLC
subclass of: SO_0000673
so part of: GCLC
location: join(7202826..7202990,7226888..7227000,7227840..7228022,7230298..7230411,7232089..7232147,7232249..7232382,7236029..7236103,7236576..7236692,7237934..7238072,7238494..7238606,7238845..7238937,7239251..7239355,7243833..7243914,7243988..7244094,7244181..7244301,7245354..7246972)
location: region:7202826-7246972:1
so has part: feature:7202826-7202990:1:exon
so has part: feature:7226888-7227000:1:exon
so has part: feature:7227840-7228022:1:exon
so has part: feature:7230298-7230411:1:exon
so has part: feature:7232089-7232147:1:exon
so has part: feature:7232249-7232382:1:exon
so has part: feature:7236029-7236103:1:exon
so has part: feature:7236576-7236692:1:exon
so has part: feature:7237934-7238072:1:exon
so has part: feature:7238494-7238606:1:exon
so has part: feature:7238845-7238937:1:exon
so has part: feature:7239251-7239355:1:exon
so has part: feature:7243833-7243914:1:exon
so has part: feature:7243988-7244094:1:exon
so has part: feature:7244181-7244301:1:exon
so has part: feature:7245354-7246972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7202826-7202990:1:exon

position:7202990:1
position: 7202990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7226888-7227000:1:exon

position:7226888:1
position: 7226888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7227000:1
position: 7227000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7227840-7228022:1:exon

position:7227840:1
position: 7227840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7228022:1
position: 7228022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7230298-7230411:1:exon

position:7230298:1
position: 7230298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7230411:1
position: 7230411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7232089-7232147:1:exon

position:7232089:1
position: 7232089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7232147:1
position: 7232147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7232249-7232382:1:exon

position:7232249:1
position: 7232249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7232382:1
position: 7232382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7236029-7236103:1:exon

position:7236029:1
position: 7236029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7236103:1
position: 7236103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7236576-7236692:1:exon

position:7236576:1
position: 7236576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7236692:1
position: 7236692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7237934-7238072:1:exon

position:7237934:1
position: 7237934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7238072:1
position: 7238072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7238494-7238606:1:exon

position:7238494:1
position: 7238494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7238606:1
position: 7238606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7238845-7238937:1:exon

position:7238845:1
position: 7238845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7238937:1
position: 7238937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7239251-7239355:1:exon

position:7239251:1
position: 7239251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7239355:1
position: 7239355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7243833-7243914:1:exon

position:7243833:1
position: 7243833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7243914:1
position: 7243914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7243988-7244094:1:exon

position:7243988:1
position: 7243988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7244094:1
position: 7244094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7244181-7244301:1:exon

position:7244181:1
position: 7244181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7244301:1
position: 7244301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7245354-7246972:1:exon

position:7245354:1
position: 7245354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GCLC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: GCLC
product: glutamate-cysteine ligase catalytic subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 128 samples with support for all annotated introns
transcript id: XM_019986065.1
SIO_010081: GCLC
subclass of: SO_0000673
so part of: GCLC
location: join(7202826..7202990,7226888..7227000,7227840..7228022,7230298..7230411,7232089..7232147,7232249..7232382,7236029..7236103,7236576..7236692,7237934..7238072,7238494..7238606,7238845..7238937,7239251..7239355,7243833..7243914,7243991..7244094,7244181..7244301,7245354..7246972)
location: region:7202826-7246972:1
so has part: feature:7202826-7202990:1:exon
so has part: feature:7226888-7227000:1:exon
so has part: feature:7227840-7228022:1:exon
so has part: feature:7230298-7230411:1:exon
so has part: feature:7232089-7232147:1:exon
so has part: feature:7232249-7232382:1:exon
so has part: feature:7236029-7236103:1:exon
so has part: feature:7236576-7236692:1:exon
so has part: feature:7237934-7238072:1:exon
so has part: feature:7238494-7238606:1:exon
so has part: feature:7238845-7238937:1:exon
so has part: feature:7239251-7239355:1:exon
so has part: feature:7243833-7243914:1:exon
so has part: feature:7243991-7244094:1:exon
so has part: feature:7244181-7244301:1:exon
so has part: feature:7245354-7246972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7202826-7202990:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7226888-7227000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7227840-7228022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7230298-7230411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7232089-7232147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7232249-7232382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7236029-7236103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7236576-7236692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7237934-7238072:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7238494-7238606:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7238845-7238937:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7239251-7239355:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7243833-7243914:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7243991-7244094:1:exon

position:7243991:1
position: 7243991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7244181-7244301:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7245354-7246972:1:exon

GCLC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: GCLC
product: glutamate-cysteine ligase catalytic subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_019986066.1
SIO_010081: GCLC
subclass of: SO_0000673
so part of: GCLC
location: join(7202826..7202990,7226888..7227000,7227840..7228022,7230298..7230411,7232089..7232147,7232249..7232382,7236029..7236103,7237934..7238072,7238494..7238606,7238845..7238937,7239251..7239355,7243833..7243914,7243988..7244094,7244181..7244301,7245354..7246972)
location: region:7202826-7246972:1
so has part: feature:7202826-7202990:1:exon
so has part: feature:7226888-7227000:1:exon
so has part: feature:7227840-7228022:1:exon
so has part: feature:7230298-7230411:1:exon
so has part: feature:7232089-7232147:1:exon
so has part: feature:7232249-7232382:1:exon
so has part: feature:7236029-7236103:1:exon
so has part: feature:7237934-7238072:1:exon
so has part: feature:7238494-7238606:1:exon
so has part: feature:7238845-7238937:1:exon
so has part: feature:7239251-7239355:1:exon
so has part: feature:7243833-7243914:1:exon
so has part: feature:7243988-7244094:1:exon
so has part: feature:7244181-7244301:1:exon
so has part: feature:7245354-7246972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7202826-7202990:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7226888-7227000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7227840-7228022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7230298-7230411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7232089-7232147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7232249-7232382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7236029-7236103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7237934-7238072:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7238494-7238606:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7238845-7238937:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7239251-7239355:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7243833-7243914:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7243988-7244094:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7244181-7244301:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7245354-7246972:1:exon

GCLC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: GCLC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate--cysteine ligase catalytic subunit isoform X1
translation: MGLLSQGSPLSWEETQRHADHVRRHGILQFLHIYHAVKDRHKDVLKWGDEVEYMLVSFDHEKKKAQLVLSGEELLETLQEKGERTNPNHPTLWRPEYGSYMIEGTPGQPYGGTMSEFNTVEDNMRKRRKEATSLLGENQALCTITSFPRLGCPGFTLPEFKPNPVEGGASKSLFFPDEAINKHPRFSTLTRNIRHRRGEKVVINVPIFKDKNTPAPFIETFPEDEEATKASKPDHIYMDAMGFGMGNCCLQVTFQACSISEARYLYDQLATICPIVMALSAASPFYRGYVSDIDCRWGVISASVDDRTREERGLEPLKNNHYRISKSRYDSIDSYLSECGEKYNDIDLTKDKEIYEQLLQEGLDHLLAQHVAHLFIRDPLTLFEEKIHLDDANESDHFENIQSTNWQTMRFKPPPPNSDIGWRVEFRPMEVQLTDFENSAYVVFVVLLTRVILSYKLDFLIPLSKVDENMKVAQKRDAVLQELFYFRKDICKAGGNAVVDGCGKAAGRAEPAAEEYALMTIDTIINGKEGVFPGLIPVLNSYLESMEVDVDTRCSILNYLKLIKKRASGELMTVAKWMREFIAKHPDYKQDSVITDQMNYSLLLKCNQIANESCECPELLGPAFRKVRYSGSKTDSST
SIO_010081: GCLC
subclass of: SO_0000673
so part of: GCLC
location: join(7202841..7202990,7226888..7227000,7227840..7228022,7230298..7230411,7232089..7232147,7232249..7232382,7236029..7236103,7236576..7236692,7237934..7238072,7238494..7238606,7238845..7238937,7239251..7239355,7243833..7243914,7243988..7244094,7244181..7244301,7245354..7245565)
location: region:7202841-7245565:1
so has part: feature:7202841-7202990:1:exon
so has part: feature:7226888-7227000:1:exon
so has part: feature:7227840-7228022:1:exon
so has part: feature:7230298-7230411:1:exon
so has part: feature:7232089-7232147:1:exon
so has part: feature:7232249-7232382:1:exon
so has part: feature:7236029-7236103:1:exon
so has part: feature:7236576-7236692:1:exon
so has part: feature:7237934-7238072:1:exon
so has part: feature:7238494-7238606:1:exon
so has part: feature:7238845-7238937:1:exon
so has part: feature:7239251-7239355:1:exon
so has part: feature:7243833-7243914:1:exon
so has part: feature:7243988-7244094:1:exon
so has part: feature:7244181-7244301:1:exon
so has part: feature:7245354-7245565:1:exon

XP_019841623.1
type: Protein
SIO_000068: ncbiprotein

position:7202841:1
position: 7202841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7245565:1
position: 7245565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7202841-7202990:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7226888-7227000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7227840-7228022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7230298-7230411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7232089-7232147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7232249-7232382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7236029-7236103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7236576-7236692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7237934-7238072:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7238494-7238606:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7238845-7238937:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7239251-7239355:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7243833-7243914:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7243988-7244094:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7244181-7244301:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7245354-7245565:1:exon

GCLC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: GCLC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate--cysteine ligase catalytic subunit isoform X2
translation: MGLLSQGSPLSWEETQRHADHVRRHGILQFLHIYHAVKDRHKDVLKWGDEVEYMLVSFDHEKKKAQLVLSGEELLETLQEKGERTNPNHPTLWRPEYGSYMIEGTPGQPYGGTMSEFNTVEDNMRKRRKEATSLLGENQALCTITSFPRLGCPGFTLPEFKPNPVEGGASKSLFFPDEAINKHPRFSTLTRNIRHRRGEKVVINVPIFKDKNTPAPFIETFPEDEEATKASKPDHIYMDAMGFGMGNCCLQVTFQACSISEARYLYDQLATICPIVMALSAASPFYRGYVSDIDCRWGVISASVDDRTREERGLEPLKNNHYRISKSRYDSIDSYLSECGEKYNDIDLTKDKEIYEQLLQEGLDHLLAQHVAHLFIRDPLTLFEEKIHLDDANESDHFENIQSTNWQTMRFKPPPPNSDIGWRVEFRPMEVQLTDFENSAYVVFVVLLTRVILSYKLDFLIPLSKVDENMKVAQKRDAVLQELFYFRKDICKGGNAVVDGCGKAAGRAEPAAEEYALMTIDTIINGKEGVFPGLIPVLNSYLESMEVDVDTRCSILNYLKLIKKRASGELMTVAKWMREFIAKHPDYKQDSVITDQMNYSLLLKCNQIANESCECPELLGPAFRKVRYSGSKTDSST
SIO_010081: GCLC
subclass of: SO_0000673
so part of: GCLC
location: join(7202841..7202990,7226888..7227000,7227840..7228022,7230298..7230411,7232089..7232147,7232249..7232382,7236029..7236103,7236576..7236692,7237934..7238072,7238494..7238606,7238845..7238937,7239251..7239355,7243833..7243914,7243991..7244094,7244181..7244301,7245354..7245565)
location: region:7202841-7245565:1
so has part: feature:7202841-7202990:1:exon
so has part: feature:7226888-7227000:1:exon
so has part: feature:7227840-7228022:1:exon
so has part: feature:7230298-7230411:1:exon
so has part: feature:7232089-7232147:1:exon
so has part: feature:7232249-7232382:1:exon
so has part: feature:7236029-7236103:1:exon
so has part: feature:7236576-7236692:1:exon
so has part: feature:7237934-7238072:1:exon
so has part: feature:7238494-7238606:1:exon
so has part: feature:7238845-7238937:1:exon
so has part: feature:7239251-7239355:1:exon
so has part: feature:7243833-7243914:1:exon
so has part: feature:7243991-7244094:1:exon
so has part: feature:7244181-7244301:1:exon
so has part: feature:7245354-7245565:1:exon

XP_019841624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7202841-7202990:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7226888-7227000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7227840-7228022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7230298-7230411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7232089-7232147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7232249-7232382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7236029-7236103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7236576-7236692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7237934-7238072:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7238494-7238606:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7238845-7238937:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7239251-7239355:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7243833-7243914:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7243991-7244094:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7244181-7244301:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7245354-7245565:1:exon

GCLC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: GCLC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate--cysteine ligase catalytic subunit isoform X3
translation: MGLLSQGSPLSWEETQRHADHVRRHGILQFLHIYHAVKDRHKDVLKWGDEVEYMLVSFDHEKKKAQLVLSGEELLETLQEKGERTNPNHPTLWRPEYGSYMIEGTPGQPYGGTMSEFNTVEDNMRKRRKEATSLLGENQALCTITSFPRLGCPGFTLPEFKPNPVEGGASKSLFFPDEAINKHPRFSTLTRNIRHRRGEKVVINVPIFKDKNTPAPFIETFPEDEEATKASKPDHIYMDAMGFGMGNCCLQVTFQACSISEARYLYDQLATICPIVPLKNNHYRISKSRYDSIDSYLSECGEKYNDIDLTKDKEIYEQLLQEGLDHLLAQHVAHLFIRDPLTLFEEKIHLDDANESDHFENIQSTNWQTMRFKPPPPNSDIGWRVEFRPMEVQLTDFENSAYVVFVVLLTRVILSYKLDFLIPLSKVDENMKVAQKRDAVLQELFYFRKDICKAGGNAVVDGCGKAAGRAEPAAEEYALMTIDTIINGKEGVFPGLIPVLNSYLESMEVDVDTRCSILNYLKLIKKRASGELMTVAKWMREFIAKHPDYKQDSVITDQMNYSLLLKCNQIANESCECPELLGPAFRKVRYSGSKTDSST
SIO_010081: GCLC
subclass of: SO_0000673
so part of: GCLC
location: join(7202841..7202990,7226888..7227000,7227840..7228022,7230298..7230411,7232089..7232147,7232249..7232382,7236029..7236103,7237934..7238072,7238494..7238606,7238845..7238937,7239251..7239355,7243833..7243914,7243988..7244094,7244181..7244301,7245354..7245565)
location: region:7202841-7245565:1
so has part: feature:7202841-7202990:1:exon
so has part: feature:7226888-7227000:1:exon
so has part: feature:7227840-7228022:1:exon
so has part: feature:7230298-7230411:1:exon
so has part: feature:7232089-7232147:1:exon
so has part: feature:7232249-7232382:1:exon
so has part: feature:7236029-7236103:1:exon
so has part: feature:7237934-7238072:1:exon
so has part: feature:7238494-7238606:1:exon
so has part: feature:7238845-7238937:1:exon
so has part: feature:7239251-7239355:1:exon
so has part: feature:7243833-7243914:1:exon
so has part: feature:7243988-7244094:1:exon
so has part: feature:7244181-7244301:1:exon
so has part: feature:7245354-7245565:1:exon

XP_019841625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7202841-7202990:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7226888-7227000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7227840-7228022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7230298-7230411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7232089-7232147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7232249-7232382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7236029-7236103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7237934-7238072:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7238494-7238606:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7238845-7238937:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7239251-7239355:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7243833-7243914:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7243988-7244094:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7244181-7244301:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7245354-7245565:1:exon

LOC109576545
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7255665..7272754
location: region:7255665-7272754:1
so has part: feature:7255665-7272754:1:exon
subclass of: SO_0000010

109576545
type: Gene
SIO_000068: ncbigene

position:7255665:1
position: 7255665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7272754:1
position: 7272754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7255665-7272754:1:exon

LOC109576545
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109576545
product: DLA class II histocompatibility antigen, DR-1 beta chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 114 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019985179.1
SIO_010081: LOC109576545
subclass of: SO_0000673
so part of: LOC109576545
location: join(7255665..7255821,7261351..7261620,7271108..7271389,7272115..7272217,7272676..7272754)
location: region:7255665-7272754:1
so has part: feature:7255665-7255821:1:exon
so has part: feature:7261351-7261620:1:exon
so has part: feature:7271108-7271389:1:exon
so has part: feature:7272115-7272217:1:exon
so has part: feature:7272676-7272754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7255665-7255821:1:exon

position:7255821:1
position: 7255821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7261351-7261620:1:exon

position:7261351:1
position: 7261351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7261620:1
position: 7261620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7271108-7271389:1:exon

position:7271108:1
position: 7271108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7271389:1
position: 7271389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7272115-7272217:1:exon

position:7272115:1
position: 7272115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7272217:1
position: 7272217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7272676-7272754:1:exon

position:7272676:1
position: 7272676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109576545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109576545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DLA class II histocompatibility antigen, DR-1 beta chain-like
translation: MVCLWFPPGSWTVILPVILMVLSPLLAWAGNTRTXFMVQGKSECHFSNGTQQVRFLDRYIYNREEQVQFDSLVGEYRARTEMXXXXXERWNRWPQALQRARAAVHAFCASNYEFFASRTVQRRVQPTVTVYPVKSRPLWHHNLLVCSVNGFYPGHIEVRWFRNGQEXEAGVVSTGLIPNGDWTFQIMVMLEIVPQGGEVYACHVEHPSRMSPVTVEWRAQDKSSQEKXLSGIGACVLGLLFLGMGLLFYIRRERFDLPGTVVVMTSEATDKMRKTEI
SIO_010081: LOC109576545
subclass of: SO_0000673
so part of: LOC109576545
location: join(7255722..7255821,7261351..7261620,7271108..7271389,7272115..7272217,7272676..7272754)
location: region:7255722-7272754:1
so has part: feature:7255722-7255821:1:exon
so has part: feature:7261351-7261620:1:exon
so has part: feature:7271108-7271389:1:exon
so has part: feature:7272115-7272217:1:exon
so has part: feature:7272676-7272754:1:exon

XP_019840738.1
type: Protein
SIO_000068: ncbiprotein

position:7255722:1
position: 7255722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7255722-7255821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7261351-7261620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7271108-7271389:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7272115-7272217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7272676-7272754:1:exon

LOC109576780
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576780
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7293039..7297895
location: region:7293039-7297895:1
so has part: feature:7293039-7297895:1:exon
subclass of: SO_0000010

109576780
type: Gene
SIO_000068: ncbigene

position:7293039:1
position: 7293039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7297895:1
position: 7297895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7293039-7297895:1:exon

LOC109576780
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109576780
product: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 62 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019985406.1
SIO_010081: LOC109576780
subclass of: SO_0000673
so part of: LOC109576780
location: join(7293039..7293222,7295080..7295328,7296798..7297079,7297727..7297895)
location: region:7293039-7297895:1
so has part: feature:7293039-7293222:1:exon
so has part: feature:7295080-7295328:1:exon
so has part: feature:7296798-7297079:1:exon
so has part: feature:7297727-7297895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7293039-7293222:1:exon

position:7293222:1
position: 7293222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7295080-7295328:1:exon

position:7295080:1
position: 7295080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7295328:1
position: 7295328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7296798-7297079:1:exon

position:7296798:1
position: 7296798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7297079:1
position: 7297079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7297727-7297895:1:exon

position:7297727:1
position: 7297727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109576780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109576780
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like
translation: MKKALILRALTLATMMSPYGGEDIVADHVGTYGTNVYQTYGASGQFTFEFDGDELFYVDLGKKETVWRLPEFSNITKFEVQSALRNIVMSKRNLDILIKNSSFTPATSEIPEVAVFPKSSVVLGIPNTLICQVDNIFPPVINITWFYNGHFVAEGIAETTFYPXSDHSFLKFSYLTFLPSSEDFYDCRVEHWGLEEPLVKHWEPEIPTPTSELTETVVCALGLAMGLMGIVVGTVLILRVRCLGAASRRRRAM
SIO_010081: LOC109576780
subclass of: SO_0000673
so part of: LOC109576780
location: join(7293147..7293222,7295080..7295328,7296798..7297079,7297727..7297881)
location: region:7293147-7297881:1
so has part: feature:7293147-7293222:1:exon
so has part: feature:7295080-7295328:1:exon
so has part: feature:7296798-7297079:1:exon
so has part: feature:7297727-7297881:1:exon

XP_019840965.1
type: Protein
SIO_000068: ncbiprotein

position:7293147:1
position: 7293147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7297881:1
position: 7297881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7293147-7293222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7295080-7295328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7296798-7297079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7297727-7297881:1:exon

LOC109576546
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7333066..7335993
location: region:7333066-7335993:1
so has part: feature:7333066-7335993:1:exon

109576546
type: Gene
SIO_000068: ncbigene

position:7333066:1
position: 7333066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7335993:1
position: 7335993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7333066-7335993:1:exon

LOC109576546
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576546
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109576546
subclass of: SO_0000673
so part of: LOC109576546
location: 7333066..7333217
location: region:7333066-7333217:1
so has part: feature:7333066-7333217:1:exon

position:7333217:1
position: 7333217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7333066-7333217:1:exon

LOC109576546
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576546
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109576546
subclass of: SO_0000673
so part of: LOC109576546
location: 7333569..7333638
location: region:7333569-7333638:1
so has part: feature:7333569-7333638:1:exon

position:7333569:1
position: 7333569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7333638:1
position: 7333638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7333569-7333638:1:exon

LOC109576546
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576546
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109576546
subclass of: SO_0000673
so part of: LOC109576546
location: 7333736..7334180
location: region:7333736-7334180:1
so has part: feature:7333736-7334180:1:exon

position:7333736:1
position: 7333736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7334180:1
position: 7334180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7333736-7334180:1:exon

LOC109576546
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576546
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109576546
subclass of: SO_0000673
so part of: LOC109576546
location: 7334638..7334645
location: region:7334638-7334645:1
so has part: feature:7334638-7334645:1:exon

position:7334638:1
position: 7334638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7334645:1
position: 7334645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7334638-7334645:1:exon

LOC109576546
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576546
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109576546
subclass of: SO_0000673
so part of: LOC109576546
location: 7334956..7335032
location: region:7334956-7335032:1
so has part: feature:7334956-7335032:1:exon

position:7334956:1
position: 7334956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7335032:1
position: 7335032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7334956-7335032:1:exon

LOC109576546
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109576546
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC109576546
subclass of: SO_0000673
so part of: LOC109576546
location: 7335888..7335993
location: region:7335888-7335993:1
so has part: feature:7335888-7335993:1:exon

position:7335888:1
position: 7335888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7335888-7335993:1:exon

LOC109577300
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577300
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7345181..7352811)
location: region:7345181-7352811:-1
so has part: feature:7345181-7352811:-1:exon
subclass of: SO_0000010

109577300
type: Gene
SIO_000068: ncbigene

position:7345181:-1
position: 7345181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7352811:-1
position: 7352811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7345181-7352811:-1:exon

LOC109577300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577300
product: antigen peptide transporter 2-like
inference: similar to RNA sequence, mRNA (same species):INSD:JT906023.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 19 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019986189.1
SIO_010081: LOC109577300
subclass of: SO_0000673
so part of: LOC109577300
location: complement(join(7345181..7345947,7346173..7346309,7346546..7346705,7346859..7347032,7347145..7347333,<7349408..7349517,7349963..7350160,7350611..7350816,7351063..7351193,7351953..7352067,7352156..7352653,7352794..7352811))
location: region:7345181-7352811:-1
so has part: feature:7352794-7352811:-1:exon
so has part: feature:7352156-7352653:-1:exon
so has part: feature:7351953-7352067:-1:exon
so has part: feature:7351063-7351193:-1:exon
so has part: feature:7350611-7350816:-1:exon
so has part: feature:7349963-7350160:-1:exon
so has part: feature:7349408-7349517:-1:exon
so has part: feature:7347145-7347333:-1:exon
so has part: feature:7346859-7347032:-1:exon
so has part: feature:7346546-7346705:-1:exon
so has part: feature:7346173-7346309:-1:exon
so has part: feature:7345181-7345947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7352794-7352811:-1:exon

position:7352794:-1
position: 7352794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7352156-7352653:-1:exon

position:7352156:-1
position: 7352156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7352653:-1
position: 7352653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7351953-7352067:-1:exon

position:7351953:-1
position: 7351953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7352067:-1
position: 7352067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7351063-7351193:-1:exon

position:7351063:-1
position: 7351063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7351193:-1
position: 7351193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7350611-7350816:-1:exon

position:7350611:-1
position: 7350611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7350816:-1
position: 7350816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7349963-7350160:-1:exon

position:7349963:-1
position: 7349963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7350160:-1
position: 7350160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7349408-7349517:-1:exon

position:7349408:-1
position: 7349408
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:7349517:-1
position: 7349517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7347145-7347333:-1:exon

position:7347145:-1
position: 7347145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7347333:-1
position: 7347333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7346859-7347032:-1:exon

position:7346859:-1
position: 7346859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7347032:-1
position: 7347032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7346546-7346705:-1:exon

position:7346546:-1
position: 7346546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7346705:-1
position: 7346705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7346173-7346309:-1:exon

position:7346173:-1
position: 7346173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7346309:-1
position: 7346309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7345181-7345947:-1:exon

position:7345947:-1
position: 7345947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109577300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577300
inference: similar to RNA sequence, mRNA (same species):INSD:JT906023.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 19 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen peptide transporter 2-like
translation: MRRPDLRPWASLLLADLALLWLLQGPLGALLPLGFLGLWLEGALRLGGLWGLLRLGGLLEGVGALLPILCLVNPLFLSLRALVLGALSAPLVRVAAATWAWLLLGYGAVGLSRALWAVLSPPGAKAEGQGQENRVLMWRLLKLSWPDLPFLVAAFSFLSLAVLGETVIPYYFGRVIDILGGDFDPDAFASAIFFVCLFSVGSSLCAGCRGSIFIFTMSRINLRIREMLFSSLLRQDLPFFQETKTGELNSRLSSDTKLMSNWLPYNTNVLSRSLVKVLGLYGFMLNLSPRLTFLSLFEVPLMIAAEKVYNARXQAVLWEIQDAAXKAGQVVRESVGGLQTVRSFGAEEQEVCRYKEALERCRRLWWRRDLERALYLLLRRMLHLAMKVLLLNCALQQILAGDLTRGGLLSFLLYQEDVGDYMQTLVYMFGDMLSNVGAAEKVFRYLDRKPDLPPPGTLAPPTLQGRVNFQNVSFAYPSRPDQPALQGLTFTLSPGQMTALVGPNGSGKSTVAALLQNLYQPTEGQVLLDGKPVSEYEHHYLHRQVVLVGQEPVLFSGSVRDNIAYGLKGCSDEKVLAAARAARAEEFIRELELGLDTEVGEKGSQLAVGQKQRLAIARALVRDPRVLILDEATSALDVECEQALQDWRAQGTRTVLVIAHRLQTVQSADQVLVLRQGRLQGPEQLMDGQDLYSWLVQQNRSVETPDTAGPAQGHLSDPE
SIO_010081: LOC109577300
subclass of: SO_0000673
so part of: LOC109577300
location: complement(join(7345717..7345947,7346173..7346309,7346546..7346705,7346859..7347032,7347145..7347333,<7349408..7349517,7349963..7350160,7350611..7350816,7351063..7351193,7351953..7352067,7352156..7352645))
location: region:7345717-7352645:-1
so has part: feature:7352156-7352645:-1:exon
so has part: feature:7351953-7352067:-1:exon
so has part: feature:7351063-7351193:-1:exon
so has part: feature:7350611-7350816:-1:exon
so has part: feature:7349963-7350160:-1:exon
so has part: feature:7349408-7349517:-1:exon
so has part: feature:7347145-7347333:-1:exon
so has part: feature:7346859-7347032:-1:exon
so has part: feature:7346546-7346705:-1:exon
so has part: feature:7346173-7346309:-1:exon
so has part: feature:7345717-7345947:-1:exon

XP_019841748.1
type: Protein
SIO_000068: ncbiprotein

position:7345717:-1
position: 7345717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7352645:-1
position: 7352645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7352156-7352645:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7351953-7352067:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7351063-7351193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7350611-7350816:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7349963-7350160:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7349408-7349517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7347145-7347333:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7346859-7347032:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7346546-7346705:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7346173-7346309:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7345717-7345947:-1:exon

LOC109577140
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7368245..7375938)
location: region:7368245-7375938:-1
so has part: feature:7368245-7375938:-1:exon
subclass of: SO_0000010

109577140
type: Gene
SIO_000068: ncbigene

position:7368245:-1
position: 7368245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7375938:-1
position: 7375938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7368245-7375938:-1:exon

LOC109577140
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577140
product: antigen peptide transporter 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_019985915.1
SIO_010081: LOC109577140
subclass of: SO_0000673
so part of: LOC109577140
location: complement(join(7368245..7368749,7368975..7369111,7369348..7369507,7369662..7369835,7369949..7370137,7372090..7372218,7372665..7372862,7373311..7373516,7373764..7373894,7374652..7374766,7374855..7375352,7375761..7375938))
location: region:7368245-7375938:-1
so has part: feature:7375761-7375938:-1:exon
so has part: feature:7374855-7375352:-1:exon
so has part: feature:7374652-7374766:-1:exon
so has part: feature:7373764-7373894:-1:exon
so has part: feature:7373311-7373516:-1:exon
so has part: feature:7372665-7372862:-1:exon
so has part: feature:7372090-7372218:-1:exon
so has part: feature:7369949-7370137:-1:exon
so has part: feature:7369662-7369835:-1:exon
so has part: feature:7369348-7369507:-1:exon
so has part: feature:7368975-7369111:-1:exon
so has part: feature:7368245-7368749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7375761-7375938:-1:exon

position:7375761:-1
position: 7375761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7374855-7375352:-1:exon

position:7374855:-1
position: 7374855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7375352:-1
position: 7375352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7374652-7374766:-1:exon

position:7374652:-1
position: 7374652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7374766:-1
position: 7374766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7373764-7373894:-1:exon

position:7373764:-1
position: 7373764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7373894:-1
position: 7373894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7373311-7373516:-1:exon

position:7373311:-1
position: 7373311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7373516:-1
position: 7373516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7372665-7372862:-1:exon

position:7372665:-1
position: 7372665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7372862:-1
position: 7372862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7372090-7372218:-1:exon

position:7372090:-1
position: 7372090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7372218:-1
position: 7372218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7369949-7370137:-1:exon

position:7369949:-1
position: 7369949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7370137:-1
position: 7370137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7369662-7369835:-1:exon

position:7369662:-1
position: 7369662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7369835:-1
position: 7369835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7369348-7369507:-1:exon

position:7369348:-1
position: 7369348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7369507:-1
position: 7369507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7368975-7369111:-1:exon

position:7368975:-1
position: 7368975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7369111:-1
position: 7369111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7368245-7368749:-1:exon

position:7368749:-1
position: 7368749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109577140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577140
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(7372818..7372820),aa:OTHER)
product: LOW QUALITY PROTEIN: antigen peptide transporter 2-like
translation: MRRPDLRPWASLLLADLALLWLLQEPLGALLPLGLPGLWLEGALRLGGLWGLLRLGGLLGGVEALXPILCLVNPLFLSLRALVLGTLSAPLVRVAAATWAWLLLGYGAVGLSRALWVLLSPPGAKAEGQGQENRVLMWRLLKLSWPDLPFLVAAFSFLSLAVLGETVIPYYFGRVIDILGGDFDPDAFASAIFFVCLFSVGSSLCAGCRGSIFTFTMSRINLRIREMLFSSLLRQDLPFFQETKTGELNSRLSSDTKLMSNWLPYNTNVLSRSLVKVLGLYGFMLNLSPRLTFLSLFEVPLMIAAEKVYSARXQAVLWEIQVXXXXAGXLVRESVGGLQTVRSFGAEEQEVCRYKEALERCRRLWWQRDLEQALYLLLXRMLHLAMKVLLLNCALQQILAGDLTRGGLLSFLLYQEDVGDYMQTLVYMFGDMLSNVGAAEKVFRYLDRKPDLPPPGTLAPPTLQGRVNFQNVSFAYPSRPDQPALQGLTFTLSPGQMTALVGPNGSGKSTVAALLQNLYQPTEGQVLLDGKPVSEYEHHYLHRQVVLVGQEPVLFSGSVRDNITYGLKGCSDEKVLAPARAARAEEFIRELELGLDTEVGEKGSQLAVGQKQRLAIARALVRDPRVLILDEATSALDVECEQALQDWRAQGTRTVLVIAHRLQTVQSADQVLVLRQGRLQGPEQLMDGQDLYSWLVQQNRNVETPDTAVXXQGHLSDPE
SIO_010081: LOC109577140
subclass of: SO_0000673
so part of: LOC109577140
location: complement(join(7368519..7368749,7368975..7369111,7369348..7369507,7369662..7369835,7369949..7370137,7372090..7372218,7372665..7372862,7373311..7373516,7373764..7373894,7374652..7374766,7374855..7375344))
location: region:7368519-7375344:-1
so has part: feature:7374855-7375344:-1:exon
so has part: feature:7374652-7374766:-1:exon
so has part: feature:7373764-7373894:-1:exon
so has part: feature:7373311-7373516:-1:exon
so has part: feature:7372665-7372862:-1:exon
so has part: feature:7372090-7372218:-1:exon
so has part: feature:7369949-7370137:-1:exon
so has part: feature:7369662-7369835:-1:exon
so has part: feature:7369348-7369507:-1:exon
so has part: feature:7368975-7369111:-1:exon
so has part: feature:7368519-7368749:-1:exon

XP_019841474.1
type: Protein
SIO_000068: ncbiprotein

position:7368519:-1
position: 7368519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7375344:-1
position: 7375344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7374855-7375344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7374652-7374766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7373764-7373894:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7373311-7373516:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7372665-7372862:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7372090-7372218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7369949-7370137:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7369662-7369835:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7369348-7369507:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7368975-7369111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7368519-7368749:-1:exon

PSMB8
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PSMB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7379657..7383686)
location: region:7379657-7383686:-1
so has part: feature:7379657-7383686:-1:exon
subclass of: SO_0000010

109577141
type: Gene
SIO_000068: ncbigene

position:7379657:-1
position: 7379657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7383686:-1
position: 7383686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7379657-7383686:-1:exon

PSMB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PSMB8
product: proteasome subunit beta 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 108 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_019985917.1
SIO_010081: PSMB8
subclass of: SO_0000673
so part of: PSMB8
location: complement(join(7379657..7379978,7380217..7380421,7380775..7380904,7381689..7381800,7381960..7382107,7382866..7383076,7383547..7383686))
location: region:7379657-7383686:-1
so has part: feature:7383547-7383686:-1:exon
so has part: feature:7382866-7383076:-1:exon
so has part: feature:7381960-7382107:-1:exon
so has part: feature:7381689-7381800:-1:exon
so has part: feature:7380775-7380904:-1:exon
so has part: feature:7380217-7380421:-1:exon
so has part: feature:7379657-7379978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7383547-7383686:-1:exon

position:7383547:-1
position: 7383547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7382866-7383076:-1:exon

position:7382866:-1
position: 7382866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7383076:-1
position: 7383076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7381960-7382107:-1:exon

position:7381960:-1
position: 7381960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7382107:-1
position: 7382107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7381689-7381800:-1:exon

position:7381689:-1
position: 7381689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7381800:-1
position: 7381800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7380775-7380904:-1:exon

position:7380775:-1
position: 7380775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7380904:-1
position: 7380904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7380217-7380421:-1:exon

position:7380217:-1
position: 7380217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7380421:-1
position: 7380421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7379657-7379978:-1:exon

position:7379978:-1
position: 7379978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PSMB8
product: proteasome subunit beta 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 147 samples with support for all annotated introns
transcript id: XM_019985918.1
SIO_010081: PSMB8
subclass of: SO_0000673
so part of: PSMB8
location: complement(join(7379657..7379978,7380217..7380421,7380775..7380904,7381689..7381800,7382866..7383485))
location: region:7379657-7383485:-1
so has part: feature:7382866-7383485:-1:exon
so has part: feature:7381689-7381800:-1:exon
so has part: feature:7380775-7380904:-1:exon
so has part: feature:7380217-7380421:-1:exon
so has part: feature:7379657-7379978:-1:exon

position:7383485:-1
position: 7383485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7382866-7383485:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7381689-7381800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7380775-7380904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7380217-7380421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7379657-7379978:-1:exon

PSMB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PSMB8
product: proteasome subunit beta 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 120 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 261 samples with support for all annotated introns
transcript id: XM_019985916.1
SIO_010081: PSMB8
subclass of: SO_0000673
so part of: PSMB8
location: complement(join(7379657..7379978,7380217..7380421,7380775..7380904,7381689..7381800,7381960..7382107,7382866..7383468))
location: region:7379657-7383468:-1
so has part: feature:7382866-7383468:-1:exon
so has part: feature:7381960-7382107:-1:exon
so has part: feature:7381689-7381800:-1:exon
so has part: feature:7380775-7380904:-1:exon
so has part: feature:7380217-7380421:-1:exon
so has part: feature:7379657-7379978:-1:exon

position:7383468:-1
position: 7383468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7382866-7383468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7381960-7382107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7381689-7381800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7380775-7380904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7380217-7380421:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7379657-7379978:-1:exon

PSMB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PSMB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-8 isoform X2
translation: MWKTFWFPPLKASGFRFHFLLREPPDLWVLGGHGAARRVRSPRRAAGGLGCAPRGKPAALGPRPLRLLPAISGARPPPGHAXTLKVNKVIEINPYLLGTMSGCAADCLYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVBEXGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQYREASQ
SIO_010081: PSMB8
subclass of: SO_0000673
so part of: PSMB8
location: complement(join(7379890..7379978,7380217..7380421,7380775..7380904,7381689..7381800,7382866..7383109))
location: region:7379890-7383109:-1
so has part: feature:7382866-7383109:-1:exon
so has part: feature:7381689-7381800:-1:exon
so has part: feature:7380775-7380904:-1:exon
so has part: feature:7380217-7380421:-1:exon
so has part: feature:7379890-7379978:-1:exon

XP_019841477.1
type: Protein
SIO_000068: ncbiprotein

position:7379890:-1
position: 7379890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7383109:-1
position: 7383109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7382866-7383109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7381689-7381800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7380775-7380904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7380217-7380421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7379890-7379978:-1:exon

PSMB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PSMB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-8 isoform X1
translation: MALLDVCGAPGGQRGDWAVPLAGSRQRSDXGHYGFSLRSPELALPRGMQPTEFFRSLGGNGESKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGNYIXTLKVNKVIEINPYLLGTMSGCAADCLYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVBEXGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQYREASQ
SIO_010081: PSMB8
subclass of: SO_0000673
so part of: PSMB8
location: complement(join(7379890..7379978,7380217..7380421,7380775..7380904,7381689..7381800,7381960..7382107,7382866..7383012))
location: region:7379890-7383012:-1
so has part: feature:7382866-7383012:-1:exon
so has part: feature:7381960-7382107:-1:exon
so has part: feature:7381689-7381800:-1:exon
so has part: feature:7380775-7380904:-1:exon
so has part: feature:7380217-7380421:-1:exon
so has part: feature:7379890-7379978:-1:exon

XP_019841475.1
type: Protein
SIO_000068: ncbiprotein

position:7383012:-1
position: 7383012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7382866-7383012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7381960-7382107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7381689-7381800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7380775-7380904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7380217-7380421:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7379890-7379978:-1:exon

PSMB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PSMB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-8 isoform X1
translation: MALLDVCGAPGGQRGDWAVPLAGSRQRSDXGHYGFSLRSPELALPRGMQPTEFFRSLGGNGESKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGNYIXTLKVNKVIEINPYLLGTMSGCAADCLYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVBEXGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDGWVKVESTDVSDLMHQYREASQ
SIO_010081: PSMB8
subclass of: SO_0000673
so part of: PSMB8
location: complement(join(7379890..7379978,7380217..7380421,7380775..7380904,7381689..7381800,7381960..7382107,7382866..7383012))
location: region:7379890-7383012:-1
so has part: feature:7382866-7383012:-1:exon
so has part: feature:7381960-7382107:-1:exon
so has part: feature:7381689-7381800:-1:exon
so has part: feature:7380775-7380904:-1:exon
so has part: feature:7380217-7380421:-1:exon
so has part: feature:7379890-7379978:-1:exon

XP_019841476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7382866-7383012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7381960-7382107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7381689-7381800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7380775-7380904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7380217-7380421:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7379890-7379978:-1:exon

TAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7384217..7393181)
location: region:7384217-7393181:-1
so has part: feature:7384217-7393181:-1:exon
subclass of: SO_0000010

109577139
type: Gene
SIO_000068: ncbigene

position:7384217:-1
position: 7384217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7393181:-1
position: 7393181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7384217-7393181:-1:exon

TAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TAP1
product: transporter 1, ATP binding cassette subfamily B member
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 69 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 255 samples with support for all annotated introns
transcript id: XM_019985914.1
SIO_010081: TAP1
subclass of: SO_0000673
so part of: TAP1
location: complement(join(7384217..7384852,7385843..7385979,7386244..7386406,7386640..7386813,7387661..7387849,7388012..7388140,7388972..7389169,7390312..7390517,7391471..7391601,7391739..7391853,7392283..7393181))
location: region:7384217-7393181:-1
so has part: feature:7392283-7393181:-1:exon
so has part: feature:7391739-7391853:-1:exon
so has part: feature:7391471-7391601:-1:exon
so has part: feature:7390312-7390517:-1:exon
so has part: feature:7388972-7389169:-1:exon
so has part: feature:7388012-7388140:-1:exon
so has part: feature:7387661-7387849:-1:exon
so has part: feature:7386640-7386813:-1:exon
so has part: feature:7386244-7386406:-1:exon
so has part: feature:7385843-7385979:-1:exon
so has part: feature:7384217-7384852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7392283-7393181:-1:exon

position:7392283:-1
position: 7392283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7391739-7391853:-1:exon

position:7391739:-1
position: 7391739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7391853:-1
position: 7391853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7391471-7391601:-1:exon

position:7391471:-1
position: 7391471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7391601:-1
position: 7391601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7390312-7390517:-1:exon

position:7390312:-1
position: 7390312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7390517:-1
position: 7390517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7388972-7389169:-1:exon

position:7388972:-1
position: 7388972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7389169:-1
position: 7389169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7388012-7388140:-1:exon

position:7388012:-1
position: 7388012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7388140:-1
position: 7388140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7387661-7387849:-1:exon

position:7387661:-1
position: 7387661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7387849:-1
position: 7387849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7386640-7386813:-1:exon

position:7386640:-1
position: 7386640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7386813:-1
position: 7386813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7386244-7386406:-1:exon

position:7386244:-1
position: 7386244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7386406:-1
position: 7386406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7385843-7385979:-1:exon

position:7385843:-1
position: 7385843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7385979:-1
position: 7385979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7384217-7384852:-1:exon

position:7384852:-1
position: 7384852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen peptide transporter 1
translation: MACSGSPVPRGRPRLPRAAVGWLGTALLLLADWMLLRPALPRVASRLVPPELPLLRVWVAGLSRCALLWLGARGVVGAALGFRRESTRVLGWLAVLEPLAAALGLALPGLALFRELVSWRAPEDADSAGHLHWEGRLDAFAFSYWAALPAATLWYKIRSLWVQGARGAFGLAMSRLLVFLGPEKSHVQFILALVFLSCFGEMAIPFFTGRLTDWIVQDETAAAFTQNVTLMSVLTIASAVLEFAADGIYNSTMGRVHSHLQGEVFQAVLRQETEFFQKNQTGEITSRVTDDTSTMSESLSSDLSLLLWYLIRGLCLLGLMLWASPSLTMITLVALPLLFLLPEKMGKWYKVLAEQVQESLAKSSQVAIEVLSAMPTVRSFANEEGEAQKFRQKLHEMMVLNXKEALAYAVNXWTSSLSGMLLKVGILYFGGQLVTSGSVSSGRLVTFILYQIQFTIAVEVLLSXYPRVQKAVGFSEKIFEYLDRVPNCPKSGSLASLTLRGXVQFQDVSFAYPNRPDVPVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTEGQVLLDGEPLPKYEHRYLHRQVAAVGQEPLLFGRSFKENIAYGLVQEPTMEEITAAAVESGAHGFISELXEGYDTEVGEAGSQLSGGQRQAVALARALIRKPRVLILDDATSALDANSQSLVERLLYESPERGSRSVLFITQRLSSVEQADHILFLEGGTIIEAGXHQQLMTNEGRYWAMVQAPGGPGAPE
SIO_010081: TAP1
subclass of: SO_0000673
so part of: TAP1
location: complement(join(7384640..7384852,7385843..7385979,7386244..7386406,7386640..7386813,7387661..7387849,7388012..7388140,7388972..7389169,7390312..7390517,7391471..7391601,7391739..7391853,7392283..7392880))
location: region:7384640-7392880:-1
so has part: feature:7392283-7392880:-1:exon
so has part: feature:7391739-7391853:-1:exon
so has part: feature:7391471-7391601:-1:exon
so has part: feature:7390312-7390517:-1:exon
so has part: feature:7388972-7389169:-1:exon
so has part: feature:7388012-7388140:-1:exon
so has part: feature:7387661-7387849:-1:exon
so has part: feature:7386640-7386813:-1:exon
so has part: feature:7386244-7386406:-1:exon
so has part: feature:7385843-7385979:-1:exon
so has part: feature:7384640-7384852:-1:exon

XP_019841473.1
type: Protein
SIO_000068: ncbiprotein

position:7384640:-1
position: 7384640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7392880:-1
position: 7392880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7392283-7392880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7391739-7391853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7391471-7391601:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7390312-7390517:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7388972-7389169:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7388012-7388140:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7387661-7387849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7386640-7386813:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7386244-7386406:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7385843-7385979:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7384640-7384852:-1:exon

PSMB9
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PSMB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7393119..7399971
location: region:7393119-7399971:1
so has part: feature:7393119-7399971:1:exon
subclass of: SO_0000010

109577143
type: Gene
SIO_000068: ncbigene

position:7393119:1
position: 7393119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7399971:1
position: 7399971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7393119-7399971:1:exon

PSMB9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PSMB9
product: proteasome subunit beta 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_019985920.1
SIO_010081: PSMB9
subclass of: SO_0000673
so part of: PSMB9
location: join(7393119..7393320,7395401..7395468,7397607..7397738,7398404..7398533,7398778..7398919,7399788..7399971)
location: region:7393119-7399971:1
so has part: feature:7393119-7393320:1:exon
so has part: feature:7395401-7395468:1:exon
so has part: feature:7397607-7397738:1:exon
so has part: feature:7398404-7398533:1:exon
so has part: feature:7398778-7398919:1:exon
so has part: feature:7399788-7399971:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7393119-7393320:1:exon

position:7393320:1
position: 7393320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7395401-7395468:1:exon

position:7395401:1
position: 7395401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7395468:1
position: 7395468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7397607-7397738:1:exon

position:7397607:1
position: 7397607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7397738:1
position: 7397738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7398404-7398533:1:exon

position:7398404:1
position: 7398404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7398533:1
position: 7398533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7398778-7398919:1:exon

position:7398778:1
position: 7398778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7398919:1
position: 7398919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7399788-7399971:1:exon

position:7399788:1
position: 7399788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMB9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PSMB9
product: proteasome subunit beta 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 91 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 243 samples with support for all annotated introns
transcript id: XM_019985919.1
SIO_010081: PSMB9
subclass of: SO_0000673
so part of: PSMB9
location: join(7393417..7393530,7395401..7395468,7397607..7397738,7398404..7398533,7398778..7398919,7399788..7399971)
location: region:7393417-7399971:1
so has part: feature:7393417-7393530:1:exon
so has part: feature:7395401-7395468:1:exon
so has part: feature:7397607-7397738:1:exon
so has part: feature:7398404-7398533:1:exon
so has part: feature:7398778-7398919:1:exon
so has part: feature:7399788-7399971:1:exon

position:7393417:1
position: 7393417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7393417-7393530:1:exon

position:7393530:1
position: 7393530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7395401-7395468:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7397607-7397738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7398404-7398533:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7398778-7398919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7399788-7399971:1:exon

PSMB9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PSMB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-9 isoform X1
translation: MLRTGAPNGDLPRAGEVHTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCALSGSAADAQAIADMAAYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQREGGQVYGTMSGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMKRDGSSGGVIYLATITGAGVDHRVILGDELPRFYDE
SIO_010081: PSMB9
subclass of: SO_0000673
so part of: PSMB9
location: join(7393471..7393530,7395401..7395468,7397607..7397738,7398404..7398533,7398778..7398919,7399788..7399915)
location: region:7393471-7399915:1
so has part: feature:7393471-7393530:1:exon
so has part: feature:7395401-7395468:1:exon
so has part: feature:7397607-7397738:1:exon
so has part: feature:7398404-7398533:1:exon
so has part: feature:7398778-7398919:1:exon
so has part: feature:7399788-7399915:1:exon

XP_019841478.1
type: Protein
SIO_000068: ncbiprotein

position:7393471:1
position: 7393471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7399915:1
position: 7399915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7393471-7393530:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7395401-7395468:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7397607-7397738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7398404-7398533:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7398778-7398919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7399788-7399915:1:exon

PSMB9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PSMB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-9 isoform X2
translation: MAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCALSGSAADAQAIADMAAYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQREGGQVYGTMSGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMKRDGSSGGVIYLATITGAGVDHRVILGDELPRFYDE
SIO_010081: PSMB9
subclass of: SO_0000673
so part of: PSMB9
location: join(7395410..7395468,7397607..7397738,7398404..7398533,7398778..7398919,7399788..7399915)
location: region:7395410-7399915:1
so has part: feature:7395410-7395468:1:exon
so has part: feature:7397607-7397738:1:exon
so has part: feature:7398404-7398533:1:exon
so has part: feature:7398778-7398919:1:exon
so has part: feature:7399788-7399915:1:exon

XP_019841479.1
type: Protein
SIO_000068: ncbiprotein

position:7395410:1
position: 7395410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7395410-7395468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7397607-7397738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7398404-7398533:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7398778-7398919:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7399788-7399915:1:exon

LOC109576805
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7417169..7417558
location: region:7417169-7417558:1
so has part: feature:7417169-7417558:1:exon
subclass of: SO_0000010

109576805
type: Gene
SIO_000068: ncbigene

position:7417169:1
position: 7417169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7417558:1
position: 7417558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7417169-7417558:1:exon

LOC109576805
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109576805
product: histone H2B type 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 65 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019985427.1
SIO_010081: LOC109576805
subclass of: SO_0000673
so part of: LOC109576805
location: 7417169..7417558
location: region:7417169-7417558:1
so has part: feature:7417169-7417558:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7417169-7417558:1:exon

LOC109576805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109576805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2B type 1-like
translation: MPEPAKKXPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVSDIFERIAGEASCLAHYNKPSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
SIO_010081: LOC109576805
subclass of: SO_0000673
so part of: LOC109576805
location: 7417178..7417558
location: region:7417178-7417558:1
so has part: feature:7417178-7417558:1:exon

XP_019840986.1
type: Protein
SIO_000068: ncbiprotein

position:7417178:1
position: 7417178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7417178-7417558:1:exon

LOC109577316
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577316
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7453547..7460406)
location: region:7453547-7460406:-1
so has part: feature:7453547-7460406:-1:exon
subclass of: SO_0000010

109577316
type: Gene
SIO_000068: ncbigene

position:7453547:-1
position: 7453547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7460406:-1
position: 7460406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7453547-7460406:-1:exon

LOC109577316
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577316
product: HLA class II histocompatibility antigen, DM beta chain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 102 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_019986209.1
SIO_010081: LOC109577316
subclass of: SO_0000673
so part of: LOC109577316
location: complement(join(7453547..7454145,7454494..7454529,7454928..7455044,7456132..7456222,7456321..7456605,7458434..7458715,7460124..7460406))
location: region:7453547-7460406:-1
so has part: feature:7460124-7460406:-1:exon
so has part: feature:7458434-7458715:-1:exon
so has part: feature:7456321-7456605:-1:exon
so has part: feature:7456132-7456222:-1:exon
so has part: feature:7454928-7455044:-1:exon
so has part: feature:7454494-7454529:-1:exon
so has part: feature:7453547-7454145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7460124-7460406:-1:exon

position:7460124:-1
position: 7460124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7458434-7458715:-1:exon

position:7458434:-1
position: 7458434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7458715:-1
position: 7458715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7456321-7456605:-1:exon

position:7456321:-1
position: 7456321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7456605:-1
position: 7456605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7456132-7456222:-1:exon

position:7456132:-1
position: 7456132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7456222:-1
position: 7456222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7454928-7455044:-1:exon

position:7454928:-1
position: 7454928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7455044:-1
position: 7455044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7454494-7454529:-1:exon

position:7454494:-1
position: 7454494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7454529:-1
position: 7454529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7453547-7454145:-1:exon

position:7454145:-1
position: 7454145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109577316
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577316
product: HLA class II histocompatibility antigen, DM beta chain, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_019986211.1
SIO_010081: LOC109577316
subclass of: SO_0000673
so part of: LOC109577316
location: complement(join(7453547..7454145,7454494..7454529,7454928..7455044,7456132..7456222,7456321..7456605,7458434..7458715,7458827..7459013,7460124..7460406))
location: region:7453547-7460406:-1
so has part: feature:7460124-7460406:-1:exon
so has part: feature:7458827-7459013:-1:exon
so has part: feature:7458434-7458715:-1:exon
so has part: feature:7456321-7456605:-1:exon
so has part: feature:7456132-7456222:-1:exon
so has part: feature:7454928-7455044:-1:exon
so has part: feature:7454494-7454529:-1:exon
so has part: feature:7453547-7454145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7460124-7460406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7458827-7459013:-1:exon

position:7458827:-1
position: 7458827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7459013:-1
position: 7459013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7458434-7458715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7456321-7456605:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7456132-7456222:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7454928-7455044:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7454494-7454529:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7453547-7454145:-1:exon

LOC109577316
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577316
product: HLA class II histocompatibility antigen, DM beta chain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 110 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 259 samples with support for all annotated introns
transcript id: XM_019986210.1
SIO_010081: LOC109577316
subclass of: SO_0000673
so part of: LOC109577316
location: complement(join(7453547..7454145,7454494..7454529,7454928..7455044,7456321..7456605,7458434..7458715,7460124..7460404))
location: region:7453547-7460404:-1
so has part: feature:7460124-7460404:-1:exon
so has part: feature:7458434-7458715:-1:exon
so has part: feature:7456321-7456605:-1:exon
so has part: feature:7454928-7455044:-1:exon
so has part: feature:7454494-7454529:-1:exon
so has part: feature:7453547-7454145:-1:exon

position:7460404:-1
position: 7460404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7460124-7460404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7458434-7458715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7456321-7456605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7454928-7455044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7454494-7454529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7453547-7454145:-1:exon

LOC109577316
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577316
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DM beta chain isoform X1
translation: MTVLLSLLLGFSLGCTAAGGFVAHVESTCVLDDDGDPKDFSYCISFNKDLLTCWDPLQASMIPREFGVLNGLARYLSQFLNNNSYLIQRLSNGLQNCAAHTQPFWSSLTHRTRPPTVQVAKTTPFNTRESVMLACYVWGFYPADVAITWRRNGQEVLPHGRAWRIIQPNGDWTYQTVSHLATTPSFGDTYTCVVEHIGAPELILQDWSLIPGRGIETPTCCSSVADSNNNNKAESYCNSWAVACADGEGFCGSGNAGPGSHHLRFRSAQLAESHLLRLHFPPGVHLSRRSAQLIEAEPYSFPST
SIO_010081: LOC109577316
subclass of: SO_0000673
so part of: LOC109577316
location: complement(join(7454097..7454145,7454494..7454529,7454928..7455044,7456132..7456222,7456321..7456605,7458434..7458715,7460124..7460178))
location: region:7454097-7460178:-1
so has part: feature:7460124-7460178:-1:exon
so has part: feature:7458434-7458715:-1:exon
so has part: feature:7456321-7456605:-1:exon
so has part: feature:7456132-7456222:-1:exon
so has part: feature:7454928-7455044:-1:exon
so has part: feature:7454494-7454529:-1:exon
so has part: feature:7454097-7454145:-1:exon

XP_019841768.1
type: Protein
SIO_000068: ncbiprotein

position:7454097:-1
position: 7454097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7460178:-1
position: 7460178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7460124-7460178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7458434-7458715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7456321-7456605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7456132-7456222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7454928-7455044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7454494-7454529:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7454097-7454145:-1:exon

LOC109577316
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577316
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DM beta chain isoform X3
translation: MIPREFGVLNGLARYLSQFLNNNSYLIQRLSNGLQNCAAHTQPFWSSLTHRTRPPTVQVAKTTPFNTRESVMLACYVWGFYPADVAITWRRNGQEVLPHGRAWRIIQPNGDWTYQTVSHLATTPSFGDTYTCVVEHIGAPELILQDWSLIPGRGIETPTCCSSVADSNNNNKAESYCNSWAVACADGEGFCGSGNAGPGSHHLRFRSAQLAESHLLRLHFPPGVHLSRRSAQLIEAEPYSFPST
SIO_010081: LOC109577316
subclass of: SO_0000673
so part of: LOC109577316
location: complement(join(7454097..7454145,7454494..7454529,7454928..7455044,7456132..7456222,7456321..7456605,7458434..7458590))
location: region:7454097-7458590:-1
so has part: feature:7458434-7458590:-1:exon
so has part: feature:7456321-7456605:-1:exon
so has part: feature:7456132-7456222:-1:exon
so has part: feature:7454928-7455044:-1:exon
so has part: feature:7454494-7454529:-1:exon
so has part: feature:7454097-7454145:-1:exon

XP_019841770.1
type: Protein
SIO_000068: ncbiprotein

position:7458590:-1
position: 7458590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7458434-7458590:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7456321-7456605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7456132-7456222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7454928-7455044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7454494-7454529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7454097-7454145:-1:exon

LOC109577316
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577316
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DM beta chain isoform X2
translation: MTVLLSLLLGFSLGCTAAGGFVAHVESTCVLDDDGDPKDFSYCISFNKDLLTCWDPLQASMIPREFGVLNGLARYLSQFLNNNSYLIQRLSNGLQNCAAHTQPFWSSLTHRTRPPTVQVAKTTPFNTRESVMLACYVWGFYPADVAITWRRNGQEVLPHGRAWRIIQPNGDWTYQTVSHLATTPSFGDTYTCVVEHIGAPELILQDWTPGLLPAQTVKVSVALVTLVLGLIIFVFGLHSWRRATSSGYIFLPGSTYPEGQHN
SIO_010081: LOC109577316
subclass of: SO_0000673
so part of: LOC109577316
location: complement(join(7454132..7454145,7454494..7454529,7454928..7455044,7456321..7456605,7458434..7458715,7460124..7460178))
location: region:7454132-7460178:-1
so has part: feature:7460124-7460178:-1:exon
so has part: feature:7458434-7458715:-1:exon
so has part: feature:7456321-7456605:-1:exon
so has part: feature:7454928-7455044:-1:exon
so has part: feature:7454494-7454529:-1:exon
so has part: feature:7454132-7454145:-1:exon

XP_019841769.1
type: Protein
SIO_000068: ncbiprotein

position:7454132:-1
position: 7454132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7460124-7460178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7458434-7458715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7456321-7456605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7454928-7455044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7454494-7454529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7454132-7454145:-1:exon

LOC109577307
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109577307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7471078..7477464)
location: region:7471078-7477464:-1
so has part: feature:7471078-7477464:-1:exon
subclass of: SO_0000010

109577307
type: Gene
SIO_000068: ncbigene

position:7471078:-1
position: 7471078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7477464:-1
position: 7477464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7471078-7477464:-1:exon

LOC109577307
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109577307
product: HLA class II histocompatibility antigen, DM alpha chain
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_019986197.1
SIO_010081: LOC109577307
subclass of: SO_0000673
so part of: LOC109577307
location: complement(join(7471078..7471277,7471629..7471754,7471965..7472242,7473663..7473947,7476176..7477464))
location: region:7471078-7477464:-1
so has part: feature:7476176-7477464:-1:exon
so has part: feature:7473663-7473947:-1:exon
so has part: feature:7471965-7472242:-1:exon
so has part: feature:7471629-7471754:-1:exon
so has part: feature:7471078-7471277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7476176-7477464:-1:exon

position:7476176:-1
position: 7476176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7473663-7473947:-1:exon

position:7473663:-1
position: 7473663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7473947:-1
position: 7473947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7471965-7472242:-1:exon

position:7471965:-1
position: 7471965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7472242:-1
position: 7472242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7471629-7471754:-1:exon

position:7471629:-1
position: 7471629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7471754:-1
position: 7471754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7471078-7471277:-1:exon

position:7471277:-1
position: 7471277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109577307
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109577307
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DM alpha chain
translation: MPRAVEGSELEKHDLGRNLGTWVSWLVVPSPPGRCEDMDHELSQEDALLRLLSFLWLLPLSWTAPEAPAPGWRDELQNHTFLHTMYCQDWSPNVALSESYDEDQLFSFDFSQSIRVPRLPEFADWAHQHGDTSDIMFDKGFCRAMIEEIGXELEGQIPVSRGFPIVQVFTLKPLEFGKPNTLVCFISNLFPPTLTVNWQHQSAPVEGAGPTFVSAVDGLTFQAFSYLNVTPAPSDXFSCIVTHEIDGYTAIAFWVPQNALPSDLLENVLCGVAFGLGVLGIIVGLVLFYCRKPCLGG
SIO_010081: LOC109577307
subclass of: SO_0000673
so part of: LOC109577307
location: complement(join(7471273..7471277,7471629..7471754,7471965..7472242,7473663..7473947,7476176..7476374))
location: region:7471273-7476374:-1
so has part: feature:7476176-7476374:-1:exon
so has part: feature:7473663-7473947:-1:exon
so has part: feature:7471965-7472242:-1:exon
so has part: feature:7471629-7471754:-1:exon
so has part: feature:7471273-7471277:-1:exon

XP_019841756.1
type: Protein
SIO_000068: ncbiprotein

position:7471273:-1
position: 7471273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7476374:-1
position: 7476374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7476176-7476374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7473663-7473947:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7471965-7472242:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7471629-7471754:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7471273-7471277:-1:exon

BRD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7557941..7570008
location: region:7557941-7570008:1
so has part: feature:7557941-7570008:1:exon
subclass of: SO_0000010

109576582
type: Gene
SIO_000068: ncbigene

position:7557941:1
position: 7557941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7570008:1
position: 7570008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7557941-7570008:1:exon

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BRD2
product: bromodomain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 180 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 242 samples with support for all annotated introns
transcript id: XM_019985212.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(7557941..7558332,7560923..7562245,7563809..7564112,7564722..7564859,7565621..7565759,7565840..7566054,7566148..7566522,7567044..7567172,7567357..7567608,7567728..7567993,7568471..7568775,7569010..7569132,7569246..7570008)
location: region:7557941-7570008:1
so has part: feature:7557941-7558332:1:exon
so has part: feature:7560923-7562245:1:exon
so has part: feature:7563809-7564112:1:exon
so has part: feature:7564722-7564859:1:exon
so has part: feature:7565621-7565759:1:exon
so has part: feature:7565840-7566054:1:exon
so has part: feature:7566148-7566522:1:exon
so has part: feature:7567044-7567172:1:exon
so has part: feature:7567357-7567608:1:exon
so has part: feature:7567728-7567993:1:exon
so has part: feature:7568471-7568775:1:exon
so has part: feature:7569010-7569132:1:exon
so has part: feature:7569246-7570008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7557941-7558332:1:exon

position:7558332:1
position: 7558332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7560923-7562245:1:exon

position:7560923:1
position: 7560923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7562245:1
position: 7562245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7563809-7564112:1:exon

position:7563809:1
position: 7563809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7564112:1
position: 7564112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7564722-7564859:1:exon

position:7564722:1
position: 7564722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7564859:1
position: 7564859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7565621-7565759:1:exon

position:7565621:1
position: 7565621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7565759:1
position: 7565759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7565840-7566054:1:exon

position:7565840:1
position: 7565840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7566054:1
position: 7566054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7566148-7566522:1:exon

position:7566148:1
position: 7566148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7566522:1
position: 7566522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7567044-7567172:1:exon

position:7567044:1
position: 7567044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7567172:1
position: 7567172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7567357-7567608:1:exon

position:7567357:1
position: 7567357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7567608:1
position: 7567608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7567728-7567993:1:exon

position:7567728:1
position: 7567728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7567993:1
position: 7567993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7568471-7568775:1:exon

position:7568471:1
position: 7568471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7568775:1
position: 7568775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7569010-7569132:1:exon

position:7569010:1
position: 7569010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7569132:1
position: 7569132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7569246-7570008:1:exon

position:7569246:1
position: 7569246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BRD2
product: bromodomain containing 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 172 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 184 samples with support for all annotated introns
transcript id: XM_019985215.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(7560198..7560513,7560923..7562245,7563809..7564112,7564364..7564455,7564722..7564859,7565621..7565759,7565840..7566054,7566148..7566522,7567044..7567172,7567357..7567608,7567728..7567993,7568471..7568775,7569010..7569132,7569246..7570008)
location: region:7560198-7570008:1
so has part: feature:7560198-7560513:1:exon
so has part: feature:7560923-7562245:1:exon
so has part: feature:7563809-7564112:1:exon
so has part: feature:7564364-7564455:1:exon
so has part: feature:7564722-7564859:1:exon
so has part: feature:7565621-7565759:1:exon
so has part: feature:7565840-7566054:1:exon
so has part: feature:7566148-7566522:1:exon
so has part: feature:7567044-7567172:1:exon
so has part: feature:7567357-7567608:1:exon
so has part: feature:7567728-7567993:1:exon
so has part: feature:7568471-7568775:1:exon
so has part: feature:7569010-7569132:1:exon
so has part: feature:7569246-7570008:1:exon

position:7560198:1
position: 7560198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7560198-7560513:1:exon

position:7560513:1
position: 7560513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7560923-7562245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7563809-7564112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7564364-7564455:1:exon

position:7564364:1
position: 7564364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7564455:1
position: 7564455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7564722-7564859:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7565621-7565759:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7565840-7566054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7566148-7566522:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7567044-7567172:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7567357-7567608:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7567728-7567993:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7568471-7568775:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7569010-7569132:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7569246-7570008:1:exon

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BRD2
product: bromodomain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 180 ESTs, 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 185 samples with support for all annotated introns
transcript id: XM_019985213.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(7560198..7560513,7560923..7562245,7563809..7564112,7564722..7564859,7565621..7565759,7565840..7566054,7566148..7566522,7567044..7567172,7567357..7567608,7567728..7567993,7568471..7568775,7569010..7569132,7569246..7570008)
location: region:7560198-7570008:1
so has part: feature:7560198-7560513:1:exon
so has part: feature:7560923-7562245:1:exon
so has part: feature:7563809-7564112:1:exon
so has part: feature:7564722-7564859:1:exon
so has part: feature:7565621-7565759:1:exon
so has part: feature:7565840-7566054:1:exon
so has part: feature:7566148-7566522:1:exon
so has part: feature:7567044-7567172:1:exon
so has part: feature:7567357-7567608:1:exon
so has part: feature:7567728-7567993:1:exon
so has part: feature:7568471-7568775:1:exon
so has part: feature:7569010-7569132:1:exon
so has part: feature:7569246-7570008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7560198-7560513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7560923-7562245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7563809-7564112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7564722-7564859:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7565621-7565759:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7565840-7566054:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7566148-7566522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7567044-7567172:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7567357-7567608:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7567728-7567993:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7568471-7568775:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7569010-7569132:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7569246-7570008:1:exon

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BRD2
product: bromodomain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 181 ESTs, 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 252 samples with support for all annotated introns
transcript id: XM_019985211.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(7560254..7560359,7560923..7562245,7563809..7564112,7564722..7564859,7565621..7565759,7565840..7566054,7566148..7566522,7567044..7567172,7567357..7567608,7567728..7567993,7568471..7568775,7569010..7569132,7569246..7570008)
location: region:7560254-7570008:1
so has part: feature:7560254-7560359:1:exon
so has part: feature:7560923-7562245:1:exon
so has part: feature:7563809-7564112:1:exon
so has part: feature:7564722-7564859:1:exon
so has part: feature:7565621-7565759:1:exon
so has part: feature:7565840-7566054:1:exon
so has part: feature:7566148-7566522:1:exon
so has part: feature:7567044-7567172:1:exon
so has part: feature:7567357-7567608:1:exon
so has part: feature:7567728-7567993:1:exon
so has part: feature:7568471-7568775:1:exon
so has part: feature:7569010-7569132:1:exon
so has part: feature:7569246-7570008:1:exon

position:7560254:1
position: 7560254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7560254-7560359:1:exon

position:7560359:1
position: 7560359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7560923-7562245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7563809-7564112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7564722-7564859:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7565621-7565759:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7565840-7566054:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7566148-7566522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7567044-7567172:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7567357-7567608:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7567728-7567993:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7568471-7568775:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7569010-7569132:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7569246-7570008:1:exon

BRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: BRD2
product: bromodomain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 148 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 251 samples with support for all annotated introns
transcript id: XM_019985214.1
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(7560255..7560359,7560923..7562245,7563809..7564112,7564364..7564455,7564722..7564859,7565621..7565759,7565840..7566054,7566148..7566522,7567044..7567172,7567357..7567608,7567728..7567993,7568471..7568775,7569010..7569132,7569246..7569985)
location: region:7560255-7569985:1
so has part: feature:7560255-7560359:1:exon
so has part: feature:7560923-7562245:1:exon
so has part: feature:7563809-7564112:1:exon
so has part: feature:7564364-7564455:1:exon
so has part: feature:7564722-7564859:1:exon
so has part: feature:7565621-7565759:1:exon
so has part: feature:7565840-7566054:1:exon
so has part: feature:7566148-7566522:1:exon
so has part: feature:7567044-7567172:1:exon
so has part: feature:7567357-7567608:1:exon
so has part: feature:7567728-7567993:1:exon
so has part: feature:7568471-7568775:1:exon
so has part: feature:7569010-7569132:1:exon
so has part: feature:7569246-7569985:1:exon

position:7560255:1
position: 7560255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7569985:1
position: 7569985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7560255-7560359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7560923-7562245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7563809-7564112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7564364-7564455:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7564722-7564859:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7565621-7565759:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7565840-7566054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7566148-7566522:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7567044-7567172:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7567357-7567608:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7567728-7567993:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7568471-7568775:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7569010-7569132:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7569246-7569985:1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X1
translation: MLQNVTPHNKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLYEGFESPTMASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSSVSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVKRKADTTTPTPTAILAPGSPASPPGGLEPKAARLPPVRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVSTALPPGLAKSSSESSSEESSSESSSEEEEEEDEDEEEEEEESESSDSEEERAHRLAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGADEDDKGPRAPRPSQPKKSKKAGGGGSSGAATLGPPGFGPSGGGATKLPKKATKTAPPALPAGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKTETSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(7562217..7562245,7563809..7564112,7564722..7564859,7565621..7565759,7565840..7566054,7566148..7566522,7567044..7567172,7567357..7567608,7567728..7567993,7568471..7568775,7569010..7569132,7569246..7569382)
location: region:7562217-7569382:1
so has part: feature:7562217-7562245:1:exon
so has part: feature:7563809-7564112:1:exon
so has part: feature:7564722-7564859:1:exon
so has part: feature:7565621-7565759:1:exon
so has part: feature:7565840-7566054:1:exon
so has part: feature:7566148-7566522:1:exon
so has part: feature:7567044-7567172:1:exon
so has part: feature:7567357-7567608:1:exon
so has part: feature:7567728-7567993:1:exon
so has part: feature:7568471-7568775:1:exon
so has part: feature:7569010-7569132:1:exon
so has part: feature:7569246-7569382:1:exon

XP_019840770.1
type: Protein
SIO_000068: ncbiprotein

position:7562217:1
position: 7562217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7569382:1
position: 7569382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7562217-7562245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7563809-7564112:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7564722-7564859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7565621-7565759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7565840-7566054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7566148-7566522:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7567044-7567172:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7567357-7567608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7567728-7567993:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7568471-7568775:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7569010-7569132:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7569246-7569382:1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X1
translation: MLQNVTPHNKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLYEGFESPTMASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSSVSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVKRKADTTTPTPTAILAPGSPASPPGGLEPKAARLPPVRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVSTALPPGLAKSSSESSSEESSSESSSEEEEEEDEDEEEEEEESESSDSEEERAHRLAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGADEDDKGPRAPRPSQPKKSKKAGGGGSSGAATLGPPGFGPSGGGATKLPKKATKTAPPALPAGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKTETSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(7562217..7562245,7563809..7564112,7564722..7564859,7565621..7565759,7565840..7566054,7566148..7566522,7567044..7567172,7567357..7567608,7567728..7567993,7568471..7568775,7569010..7569132,7569246..7569382)
location: region:7562217-7569382:1
so has part: feature:7562217-7562245:1:exon
so has part: feature:7563809-7564112:1:exon
so has part: feature:7564722-7564859:1:exon
so has part: feature:7565621-7565759:1:exon
so has part: feature:7565840-7566054:1:exon
so has part: feature:7566148-7566522:1:exon
so has part: feature:7567044-7567172:1:exon
so has part: feature:7567357-7567608:1:exon
so has part: feature:7567728-7567993:1:exon
so has part: feature:7568471-7568775:1:exon
so has part: feature:7569010-7569132:1:exon
so has part: feature:7569246-7569382:1:exon

XP_019840771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7562217-7562245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7563809-7564112:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7564722-7564859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7565621-7565759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7565840-7566054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7566148-7566522:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7567044-7567172:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7567357-7567608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7567728-7567993:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7568471-7568775:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7569010-7569132:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7569246-7569382:1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X1
translation: MLQNVTPHNKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLYEGFESPTMASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSSVSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVKRKADTTTPTPTAILAPGSPASPPGGLEPKAARLPPVRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVSTALPPGLAKSSSESSSEESSSESSSEEEEEEDEDEEEEEEESESSDSEEERAHRLAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGADEDDKGPRAPRPSQPKKSKKAGGGGSSGAATLGPPGFGPSGGGATKLPKKATKTAPPALPAGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKTETSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(7562217..7562245,7563809..7564112,7564722..7564859,7565621..7565759,7565840..7566054,7566148..7566522,7567044..7567172,7567357..7567608,7567728..7567993,7568471..7568775,7569010..7569132,7569246..7569382)
location: region:7562217-7569382:1
so has part: feature:7562217-7562245:1:exon
so has part: feature:7563809-7564112:1:exon
so has part: feature:7564722-7564859:1:exon
so has part: feature:7565621-7565759:1:exon
so has part: feature:7565840-7566054:1:exon
so has part: feature:7566148-7566522:1:exon
so has part: feature:7567044-7567172:1:exon
so has part: feature:7567357-7567608:1:exon
so has part: feature:7567728-7567993:1:exon
so has part: feature:7568471-7568775:1:exon
so has part: feature:7569010-7569132:1:exon
so has part: feature:7569246-7569382:1:exon

XP_019840772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7562217-7562245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7563809-7564112:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7564722-7564859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7565621-7565759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7565840-7566054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7566148-7566522:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7567044-7567172:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7567357-7567608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7567728-7567993:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7568471-7568775:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7569010-7569132:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7569246-7569382:1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X2
translation: MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSSVSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVKRKADTTTPTPTAILAPGSPASPPGGLEPKAARLPPVRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVSTALPPGLAKSSSESSSEESSSESSSEEEEEEDEDEEEEEEESESSDSEEERAHRLAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGADEDDKGPRAPRPSQPKKSKKAGGGGSSGAATLGPPGFGPSGGGATKLPKKATKTAPPALPAGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKTETSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(7564749..7564859,7565621..7565759,7565840..7566054,7566148..7566522,7567044..7567172,7567357..7567608,7567728..7567993,7568471..7568775,7569010..7569132,7569246..7569382)
location: region:7564749-7569382:1
so has part: feature:7564749-7564859:1:exon
so has part: feature:7565621-7565759:1:exon
so has part: feature:7565840-7566054:1:exon
so has part: feature:7566148-7566522:1:exon
so has part: feature:7567044-7567172:1:exon
so has part: feature:7567357-7567608:1:exon
so has part: feature:7567728-7567993:1:exon
so has part: feature:7568471-7568775:1:exon
so has part: feature:7569010-7569132:1:exon
so has part: feature:7569246-7569382:1:exon

XP_019840773.1
type: Protein
SIO_000068: ncbiprotein

position:7564749:1
position: 7564749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7564749-7564859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7565621-7565759:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7565840-7566054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7566148-7566522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7567044-7567172:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7567357-7567608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7567728-7567993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7568471-7568775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7569010-7569132:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7569246-7569382:1:exon

BRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: BRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 2 isoform X2
translation: MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSSVSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVKRKADTTTPTPTAILAPGSPASPPGGLEPKAARLPPVRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVSTALPPGLAKSSSESSSEESSSESSSEEEEEEDEDEEEEEEESESSDSEEERAHRLAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGADEDDKGPRAPRPSQPKKSKKAGGGGSSGAATLGPPGFGPSGGGATKLPKKATKTAPPALPAGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKTETSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG
SIO_010081: BRD2
subclass of: SO_0000673
so part of: BRD2
location: join(7564749..7564859,7565621..7565759,7565840..7566054,7566148..7566522,7567044..7567172,7567357..7567608,7567728..7567993,7568471..7568775,7569010..7569132,7569246..7569382)
location: region:7564749-7569382:1
so has part: feature:7564749-7564859:1:exon
so has part: feature:7565621-7565759:1:exon
so has part: feature:7565840-7566054:1:exon
so has part: feature:7566148-7566522:1:exon
so has part: feature:7567044-7567172:1:exon
so has part: feature:7567357-7567608:1:exon
so has part: feature:7567728-7567993:1:exon
so has part: feature:7568471-7568775:1:exon
so has part: feature:7569010-7569132:1:exon
so has part: feature:7569246-7569382:1:exon

XP_019840774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7564749-7564859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7565621-7565759:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7565840-7566054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7566148-7566522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7567044-7567172:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7567357-7567608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7567728-7567993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7568471-7568775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7569010-7569132:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7569246-7569382:1:exon

LOC109576596
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109576596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7592581..7598765)
location: region:7592581-7598765:-1
so has part: feature:7592581-7598765:-1:exon
subclass of: SO_0000010

109576596
type: Gene
SIO_000068: ncbigene

position:7592581:-1
position: 7592581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7598765:-1
position: 7598765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7592581-7598765:-1:exon

LOC109576596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109576596
product: HLA class II histocompatibility antigen, DO alpha chain-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019985241.1
SIO_010081: LOC109576596
subclass of: SO_0000673
so part of: LOC109576596
location: complement(join(7592581..7592886,7593048..7593209,7593305..7593586,7594191..7594244,7598632..7598765))
location: region:7592581-7598765:-1
so has part: feature:7598632-7598765:-1:exon
so has part: feature:7594191-7594244:-1:exon
so has part: feature:7593305-7593586:-1:exon
so has part: feature:7593048-7593209:-1:exon
so has part: feature:7592581-7592886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7598632-7598765:-1:exon

position:7598632:-1
position: 7598632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7594191-7594244:-1:exon

position:7594191:-1
position: 7594191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7594244:-1
position: 7594244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7593305-7593586:-1:exon

position:7593305:-1
position: 7593305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7593586:-1
position: 7593586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7593048-7593209:-1:exon

position:7593048:-1
position: 7593048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7593209:-1
position: 7593209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7592581-7592886:-1:exon

position:7592886:-1
position: 7592886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109576596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109576596
product: HLA class II histocompatibility antigen, DO alpha chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_019985240.1
SIO_010081: LOC109576596
subclass of: SO_0000673
so part of: LOC109576596
location: complement(join(7592581..7592886,7593305..7593586,7593996..7594244,7598632..7598765))
location: region:7592581-7598765:-1
so has part: feature:7598632-7598765:-1:exon
so has part: feature:7593996-7594244:-1:exon
so has part: feature:7593305-7593586:-1:exon
so has part: feature:7592581-7592886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7598632-7598765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7593996-7594244:-1:exon

position:7593996:-1
position: 7593996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7593305-7593586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7592581-7592886:-1:exon

LOC109576596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109576596
product: HLA class II histocompatibility antigen, DO alpha chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_019985239.1
SIO_010081: LOC109576596
subclass of: SO_0000673
so part of: LOC109576596
location: complement(join(7592581..7592886,7593074..7593209,7593305..7593586,7593996..7594244,7598632..7598765))
location: region:7592581-7598765:-1
so has part: feature:7598632-7598765:-1:exon
so has part: feature:7593996-7594244:-1:exon
so has part: feature:7593305-7593586:-1:exon
so has part: feature:7593074-7593209:-1:exon
so has part: feature:7592581-7592886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7598632-7598765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7593996-7594244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7593305-7593586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7593074-7593209:-1:exon

position:7593074:-1
position: 7593074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7592581-7592886:-1:exon

LOC109576596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109576596
product: HLA class II histocompatibility antigen, DO alpha chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_019985238.1
SIO_010081: LOC109576596
subclass of: SO_0000673
so part of: LOC109576596
location: complement(join(7592581..7592886,7593048..7593209,7593305..7593586,7593996..7594244,7598632..7598765))
location: region:7592581-7598765:-1
so has part: feature:7598632-7598765:-1:exon
so has part: feature:7593996-7594244:-1:exon
so has part: feature:7593305-7593586:-1:exon
so has part: feature:7593048-7593209:-1:exon
so has part: feature:7592581-7592886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7598632-7598765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7593996-7594244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7593305-7593586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7593048-7593209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7592581-7592886:-1:exon

LOC109576596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109576596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DO alpha chain-like isoform X4
translation: MVLRGRLVLGLHTLMTLLSLQEVGAIKADHMGSYGPAFYQSYDGAVSPRVAVLPKSRVQLGEPNVLICIVDKIFPPVINITWLRNGHPVTQGVTQSSFYAQPDHLFRKFHYLTFVPLADDFYDCKVEHWGLDQPLFQHWEPQVPTALPDTTGTLVCALGLVLGLGGFLGGITLIITGTCLSSTPRCSGGLGEEGDGPSERSKCETPFSFLASF
SIO_010081: LOC109576596
subclass of: SO_0000673
so part of: LOC109576596
location: complement(join(7592825..7592886,7593048..7593209,7593305..7593586,7594191..7594244,7598632..7598713))
location: region:7592825-7598713:-1
so has part: feature:7598632-7598713:-1:exon
so has part: feature:7594191-7594244:-1:exon
so has part: feature:7593305-7593586:-1:exon
so has part: feature:7593048-7593209:-1:exon
so has part: feature:7592825-7592886:-1:exon

XP_019840800.1
type: Protein
SIO_000068: ncbiprotein

position:7592825:-1
position: 7592825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7598713:-1
position: 7598713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7598632-7598713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7594191-7594244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7593305-7593586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7593048-7593209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7592825-7592886:-1:exon

LOC109576596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109576596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DO alpha chain-like isoform X3
translation: MVLRGRLVLGLHTLMTLLSLQEVGAIKADHMGSYGPAFYQSYDGAGQFTYDFDGEQLFSVDLKKREAVWRLPEFGNFAYFDPQSGLVSIAMIKAHLEDLVKRSNGTRAPNVSPRVAVLPKSRVQLGEPNVLICIVDKIFPPVINITWLRNGHPVTQGVTQSSFYAQPDHLFRKFHYLTFVPLADDFYDCKVEHWGLDQPLFQHWGDGPSERSKCETPFSFLASF
SIO_010081: LOC109576596
subclass of: SO_0000673
so part of: LOC109576596
location: complement(join(7592825..7592886,7593305..7593586,7593996..7594244,7598632..7598713))
location: region:7592825-7598713:-1
so has part: feature:7598632-7598713:-1:exon
so has part: feature:7593996-7594244:-1:exon
so has part: feature:7593305-7593586:-1:exon
so has part: feature:7592825-7592886:-1:exon

XP_019840799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7598632-7598713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7593996-7594244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7593305-7593586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7592825-7592886:-1:exon

LOC109576596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109576596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DO alpha chain-like isoform X1
translation: MVLRGRLVLGLHTLMTLLSLQEVGAIKADHMGSYGPAFYQSYDGAGQFTYDFDGEQLFSVDLKKREAVWRLPEFGNFAYFDPQSGLVSIAMIKAHLEDLVKRSNGTRAPNVSPRVAVLPKSRVQLGEPNVLICIVDKIFPPVINITWLRNGHPVTQGVTQSSFYAQPDHLFRKFHYLTFVPLADDFYDCKVEHWGLDQPLFQHWEPQVPTALPDTTGTLVCALGLVLGLGGFLGGITLIITGTCLSSTPRCSGGLGEEGDGPSERSKCETPFSFLASF
SIO_010081: LOC109576596
subclass of: SO_0000673
so part of: LOC109576596
location: complement(join(7592825..7592886,7593048..7593209,7593305..7593586,7593996..7594244,7598632..7598713))
location: region:7592825-7598713:-1
so has part: feature:7598632-7598713:-1:exon
so has part: feature:7593996-7594244:-1:exon
so has part: feature:7593305-7593586:-1:exon
so has part: feature:7593048-7593209:-1:exon
so has part: feature:7592825-7592886:-1:exon

XP_019840797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7598632-7598713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7593996-7594244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7593305-7593586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7593048-7593209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7592825-7592886:-1:exon

LOC109576596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109576596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DO alpha chain-like isoform X2
translation: MVLRGRLVLGLHTLMTLLSLQEVGAIKADHMGSYGPAFYQSYDGAGQFTYDFDGEQLFSVDLKKREAVWRLPEFGNFAYFDPQSGLVSIAMIKAHLEDLVKRSNGTRAPNVSPRVAVLPKSRVQLGEPNVLICIVDKIFPPVINITWLRNGHPVTQGVTQSSFYAQPDHLFRKFHYLTFVPLADDFYDCKVEHWGLDQPLFQHWEPQVPTALPDTTGTLVCALGLVLGLGGFLGGITLIITGTCLSSTPR
SIO_010081: LOC109576596
subclass of: SO_0000673
so part of: LOC109576596
location: complement(join(7592883..7592886,7593074..7593209,7593305..7593586,7593996..7594244,7598632..7598713))
location: region:7592883-7598713:-1
so has part: feature:7598632-7598713:-1:exon
so has part: feature:7593996-7594244:-1:exon
so has part: feature:7593305-7593586:-1:exon
so has part: feature:7593074-7593209:-1:exon
so has part: feature:7592883-7592886:-1:exon

XP_019840798.1
type: Protein
SIO_000068: ncbiprotein

position:7592883:-1
position: 7592883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7598632-7598713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7593996-7594244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7593305-7593586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7593074-7593209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7592883-7592886:-1:exon

COL11A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: COL11A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7624706..7653690)
location: region:7624706-7653690:-1
so has part: feature:7624706-7653690:-1:exon
subclass of: SO_0000010

109576547
type: Gene
SIO_000068: ncbigene

position:7624706:-1
position: 7624706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7653690:-1
position: 7653690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7624706-7653690:-1:exon

COL11A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: COL11A2
product: collagen type XI alpha 2 chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019985180.1
SIO_010081: COL11A2
subclass of: SO_0000673
so part of: COL11A2
location: complement(join(7624706..7625384,7626077..7626283,7626577..7626689,7627817..7628084,7628179..7628232,7628412..7628447,7628748..7628801,7628935..7629042,7629265..7629318,7629437..7629490,7629582..7629689,7629932..7629985,7630669..7630722,7630817..7630870,7631048..7631101,7631461..7631568,7631882..7631935,7632244..7632297,7632482..7632535,7632734..7632787,7632988..7633095,7633242..7633295,7633398..7633451,7633582..7633689,7633804..7633911,7634120..7634173,7634350..7634439,7634584..7634691,7635098..7635151,7635362..7635415,7635510..7635563,7635693..7635737,7635859..7635912,7636000..7636044,7636132..7636185,7636481..7636534,7637500..7637607,7637953..7638006,7638271..7638315,7638439..7638492,7638711..7638755,7638994..7639047,7639149..7639193,7639389..7639442,7639639..7639683,7640019..7640072,7640186..7640230,7640355..7640408,7640611..7640664,7640794..7640847,7640937..7640990,7641083..7641136,7641299..7641355,7641619..7641738,7644792..7645100,7645761..7645823,7646472..7646549,7647609..7647800,7649236..7649398,7650180..7650390,7650508..7650657,7653393..7653690))
location: region:7624706-7653690:-1
so has part: feature:7653393-7653690:-1:exon
so has part: feature:7650508-7650657:-1:exon
so has part: feature:7650180-7650390:-1:exon
so has part: feature:7649236-7649398:-1:exon
so has part: feature:7647609-7647800:-1:exon
so has part: feature:7646472-7646549:-1:exon
so has part: feature:7645761-7645823:-1:exon
so has part: feature:7644792-7645100:-1:exon
so has part: feature:7641619-7641738:-1:exon
so has part: feature:7641299-7641355:-1:exon
so has part: feature:7641083-7641136:-1:exon
so has part: feature:7640937-7640990:-1:exon
so has part: feature:7640794-7640847:-1:exon
so has part: feature:7640611-7640664:-1:exon
so has part: feature:7640355-7640408:-1:exon
so has part: feature:7640186-7640230:-1:exon
so has part: feature:7640019-7640072:-1:exon
so has part: feature:7639639-7639683:-1:exon
so has part: feature:7639389-7639442:-1:exon
so has part: feature:7639149-7639193:-1:exon
so has part: feature:7638994-7639047:-1:exon
so has part: feature:7638711-7638755:-1:exon
so has part: feature:7638439-7638492:-1:exon
so has part: feature:7638271-7638315:-1:exon
so has part: feature:7637953-7638006:-1:exon
so has part: feature:7637500-7637607:-1:exon
so has part: feature:7636481-7636534:-1:exon
so has part: feature:7636132-7636185:-1:exon
so has part: feature:7636000-7636044:-1:exon
so has part: feature:7635859-7635912:-1:exon
so has part: feature:7635693-7635737:-1:exon
so has part: feature:7635510-7635563:-1:exon
so has part: feature:7635362-7635415:-1:exon
so has part: feature:7635098-7635151:-1:exon
so has part: feature:7634584-7634691:-1:exon
so has part: feature:7634350-7634439:-1:exon
so has part: feature:7634120-7634173:-1:exon
so has part: feature:7633804-7633911:-1:exon
so has part: feature:7633582-7633689:-1:exon
so has part: feature:7633398-7633451:-1:exon
so has part: feature:7633242-7633295:-1:exon
so has part: feature:7632988-7633095:-1:exon
so has part: feature:7632734-7632787:-1:exon
so has part: feature:7632482-7632535:-1:exon
so has part: feature:7632244-7632297:-1:exon
so has part: feature:7631882-7631935:-1:exon
so has part: feature:7631461-7631568:-1:exon
so has part: feature:7631048-7631101:-1:exon
so has part: feature:7630817-7630870:-1:exon
so has part: feature:7630669-7630722:-1:exon
so has part: feature:7629932-7629985:-1:exon
so has part: feature:7629582-7629689:-1:exon
so has part: feature:7629437-7629490:-1:exon
so has part: feature:7629265-7629318:-1:exon
so has part: feature:7628935-7629042:-1:exon
so has part: feature:7628748-7628801:-1:exon
so has part: feature:7628412-7628447:-1:exon
so has part: feature:7628179-7628232:-1:exon
so has part: feature:7627817-7628084:-1:exon
so has part: feature:7626577-7626689:-1:exon
so has part: feature:7626077-7626283:-1:exon
so has part: feature:7624706-7625384:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7653393-7653690:-1:exon

position:7653393:-1
position: 7653393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7650508-7650657:-1:exon

position:7650508:-1
position: 7650508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7650657:-1
position: 7650657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7650180-7650390:-1:exon

position:7650180:-1
position: 7650180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7650390:-1
position: 7650390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7649236-7649398:-1:exon

position:7649236:-1
position: 7649236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7649398:-1
position: 7649398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7647609-7647800:-1:exon

position:7647609:-1
position: 7647609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7647800:-1
position: 7647800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7646472-7646549:-1:exon

position:7646472:-1
position: 7646472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7646549:-1
position: 7646549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7645761-7645823:-1:exon

position:7645761:-1
position: 7645761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7645823:-1
position: 7645823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7644792-7645100:-1:exon

position:7644792:-1
position: 7644792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7645100:-1
position: 7645100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7641619-7641738:-1:exon

position:7641619:-1
position: 7641619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7641738:-1
position: 7641738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7641299-7641355:-1:exon

position:7641299:-1
position: 7641299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7641355:-1
position: 7641355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7641083-7641136:-1:exon

position:7641083:-1
position: 7641083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7641136:-1
position: 7641136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7640937-7640990:-1:exon

position:7640937:-1
position: 7640937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7640990:-1
position: 7640990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7640794-7640847:-1:exon

position:7640794:-1
position: 7640794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7640847:-1
position: 7640847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7640611-7640664:-1:exon

position:7640611:-1
position: 7640611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7640664:-1
position: 7640664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7640355-7640408:-1:exon

position:7640355:-1
position: 7640355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7640408:-1
position: 7640408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7640186-7640230:-1:exon

position:7640186:-1
position: 7640186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7640230:-1
position: 7640230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7640019-7640072:-1:exon

position:7640019:-1
position: 7640019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7640072:-1
position: 7640072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7639639-7639683:-1:exon

position:7639639:-1
position: 7639639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7639683:-1
position: 7639683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7639389-7639442:-1:exon

position:7639389:-1
position: 7639389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7639442:-1
position: 7639442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7639149-7639193:-1:exon

position:7639149:-1
position: 7639149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7639193:-1
position: 7639193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7638994-7639047:-1:exon

position:7638994:-1
position: 7638994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7639047:-1
position: 7639047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7638711-7638755:-1:exon

position:7638711:-1
position: 7638711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7638755:-1
position: 7638755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7638439-7638492:-1:exon

position:7638439:-1
position: 7638439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7638492:-1
position: 7638492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7638271-7638315:-1:exon

position:7638271:-1
position: 7638271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7638315:-1
position: 7638315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7637953-7638006:-1:exon

position:7637953:-1
position: 7637953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7638006:-1
position: 7638006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7637500-7637607:-1:exon

position:7637500:-1
position: 7637500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7637607:-1
position: 7637607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7636481-7636534:-1:exon

position:7636481:-1
position: 7636481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7636534:-1
position: 7636534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7636132-7636185:-1:exon

position:7636132:-1
position: 7636132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7636185:-1
position: 7636185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:7636000-7636044:-1:exon

position:7636000:-1
position: 7636000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7636044:-1
position: 7636044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:7635859-7635912:-1:exon

position:7635859:-1
position: 7635859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7635912:-1
position: 7635912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:7635693-7635737:-1:exon

position:7635693:-1
position: 7635693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7635737:-1
position: 7635737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:7635510-7635563:-1:exon

position:7635510:-1
position: 7635510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7635563:-1
position: 7635563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:7635362-7635415:-1:exon

position:7635362:-1
position: 7635362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7635415:-1
position: 7635415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:7635098-7635151:-1:exon

position:7635098:-1
position: 7635098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7635151:-1
position: 7635151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:7634584-7634691:-1:exon

position:7634584:-1
position: 7634584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7634691:-1
position: 7634691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:7634350-7634439:-1:exon

position:7634350:-1
position: 7634350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7634439:-1
position: 7634439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:7634120-7634173:-1:exon

position:7634120:-1
position: 7634120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7634173:-1
position: 7634173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:7633804-7633911:-1:exon

position:7633804:-1
position: 7633804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7633911:-1
position: 7633911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:7633582-7633689:-1:exon

position:7633582:-1
position: 7633582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7633689:-1
position: 7633689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:7633398-7633451:-1:exon

position:7633398:-1
position: 7633398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7633451:-1
position: 7633451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:7633242-7633295:-1:exon

position:7633242:-1
position: 7633242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7633295:-1
position: 7633295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:7632988-7633095:-1:exon

position:7632988:-1
position: 7632988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7633095:-1
position: 7633095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:7632734-7632787:-1:exon

position:7632734:-1
position: 7632734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7632787:-1
position: 7632787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:7632482-7632535:-1:exon

position:7632482:-1
position: 7632482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7632535:-1
position: 7632535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:7632244-7632297:-1:exon

position:7632244:-1
position: 7632244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7632297:-1
position: 7632297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:7631882-7631935:-1:exon

position:7631882:-1
position: 7631882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7631935:-1
position: 7631935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:7631461-7631568:-1:exon

position:7631461:-1
position: 7631461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7631568:-1
position: 7631568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:7631048-7631101:-1:exon

position:7631048:-1
position: 7631048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7631101:-1
position: 7631101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:7630817-7630870:-1:exon

position:7630817:-1
position: 7630817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7630870:-1
position: 7630870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:7630669-7630722:-1:exon

position:7630669:-1
position: 7630669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7630722:-1
position: 7630722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:7629932-7629985:-1:exon

position:7629932:-1
position: 7629932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7629985:-1
position: 7629985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:7629582-7629689:-1:exon

position:7629582:-1
position: 7629582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7629689:-1
position: 7629689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:7629437-7629490:-1:exon

position:7629437:-1
position: 7629437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7629490:-1
position: 7629490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:7629265-7629318:-1:exon

position:7629265:-1
position: 7629265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7629318:-1
position: 7629318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:7628935-7629042:-1:exon

position:7628935:-1
position: 7628935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7629042:-1
position: 7629042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:7628748-7628801:-1:exon

position:7628748:-1
position: 7628748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7628801:-1
position: 7628801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:7628412-7628447:-1:exon

position:7628412:-1
position: 7628412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7628447:-1
position: 7628447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:7628179-7628232:-1:exon

position:7628179:-1
position: 7628179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7628232:-1
position: 7628232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:7627817-7628084:-1:exon

position:7627817:-1
position: 7627817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7628084:-1
position: 7628084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:7626577-7626689:-1:exon

position:7626577:-1
position: 7626577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7626689:-1
position: 7626689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 61
SIO_000628: feature:7626077-7626283:-1:exon

position:7626077:-1
position: 7626077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7626283:-1
position: 7626283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 62
SIO_000628: feature:7624706-7625384:-1:exon

position:7625384:-1
position: 7625384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COL11A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: COL11A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-2(XI) chain
translation: MERCSRCHHLLLLVLLLLWLSAAPAWAGTAPVDVLRALRFPALPDGVRRARGICPADVAYRVSRPAQLSAPTRQLFPGGFPKDFSLLTAVRARPGLQAPLLTLYSAQGVRQLGLELGRPVRFLYEDQTGRPQPPAQPVFRGLSLADGKWHXVAVAVKGQSVTLIIDCKKRVTRPLPRSARPVLDTRGVIIFGARILDEEVFEGDIQELSIIPGVQAAYESCDQKELECEGGWRERPQRQPSHRTQRSPKQQPPRLHRPQNQEPQAQSTESLYYDYEPPYYDVMTTGTTPDYQDPTPGEEEGILESSPLPPPEEEQTDLQVPPTADRFLTEEYGEGGTEPPAGPYDYTYAYGDDYHEETELGPALSAETARSEAVSPRSSSFTLDLQRESLPVFFGCCLSSESYFPPVIYHFLFTWINLDFLLLLAPQFRFGSGGGDKGPVVAAQEAQAQAILQQARMALRGPPGPMGYTGRPGPLGQPGSPGMKGESGDLGPQGPRGPQGLMGPPGKAGRRGRAGADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGIKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLTGTAGKEGTKGDPGPPXXPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPAGPPGPAGSPGERGSAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGAKGSKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGETGQAGEAGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEVGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDTGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSTGQKGETGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPAGPKGEKGVQGPPGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLMQEDEAVPTGGAPGSPGGLEEIFGSLDSLREEIEQMRRPMGTQDSPARTCQDLKLCHPELPDGEYWVDPNQGCXRDAFRVFCNFTAGGETCVTPRDDVTQFSYVDSEGAPVGVVQLTFLRLLSVSARQNISYPCSGEAQDSPLKLRGANEDELSPETSPYIKEIRDGCQTQQGRTVLEVRTPVLEQLPVLDASFSELGAPPRRGGVLLGPVCFMG
SIO_010081: COL11A2
subclass of: SO_0000673
so part of: COL11A2
location: complement(join(7625244..7625384,7626077..7626283,7626577..7626689,7627817..7628084,7628179..7628232,7628412..7628447,7628748..7628801,7628935..7629042,7629265..7629318,7629437..7629490,7629582..7629689,7629932..7629985,7630669..7630722,7630817..7630870,7631048..7631101,7631461..7631568,7631882..7631935,7632244..7632297,7632482..7632535,7632734..7632787,7632988..7633095,7633242..7633295,7633398..7633451,7633582..7633689,7633804..7633911,7634120..7634173,7634350..7634439,7634584..7634691,7635098..7635151,7635362..7635415,7635510..7635563,7635693..7635737,7635859..7635912,7636000..7636044,7636132..7636185,7636481..7636534,7637500..7637607,7637953..7638006,7638271..7638315,7638439..7638492,7638711..7638755,7638994..7639047,7639149..7639193,7639389..7639442,7639639..7639683,7640019..7640072,7640186..7640230,7640355..7640408,7640611..7640664,7640794..7640847,7640937..7640990,7641083..7641136,7641299..7641355,7641619..7641738,7644792..7645100,7645761..7645823,7646472..7646549,7647609..7647800,7649236..7649398,7650180..7650390,7650508..7650657,7653393..7653474))
location: region:7625244-7653474:-1
so has part: feature:7653393-7653474:-1:exon
so has part: feature:7650508-7650657:-1:exon
so has part: feature:7650180-7650390:-1:exon
so has part: feature:7649236-7649398:-1:exon
so has part: feature:7647609-7647800:-1:exon
so has part: feature:7646472-7646549:-1:exon
so has part: feature:7645761-7645823:-1:exon
so has part: feature:7644792-7645100:-1:exon
so has part: feature:7641619-7641738:-1:exon
so has part: feature:7641299-7641355:-1:exon
so has part: feature:7641083-7641136:-1:exon
so has part: feature:7640937-7640990:-1:exon
so has part: feature:7640794-7640847:-1:exon
so has part: feature:7640611-7640664:-1:exon
so has part: feature:7640355-7640408:-1:exon
so has part: feature:7640186-7640230:-1:exon
so has part: feature:7640019-7640072:-1:exon
so has part: feature:7639639-7639683:-1:exon
so has part: feature:7639389-7639442:-1:exon
so has part: feature:7639149-7639193:-1:exon
so has part: feature:7638994-7639047:-1:exon
so has part: feature:7638711-7638755:-1:exon
so has part: feature:7638439-7638492:-1:exon
so has part: feature:7638271-7638315:-1:exon
so has part: feature:7637953-7638006:-1:exon
so has part: feature:7637500-7637607:-1:exon
so has part: feature:7636481-7636534:-1:exon
so has part: feature:7636132-7636185:-1:exon
so has part: feature:7636000-7636044:-1:exon
so has part: feature:7635859-7635912:-1:exon
so has part: feature:7635693-7635737:-1:exon
so has part: feature:7635510-7635563:-1:exon
so has part: feature:7635362-7635415:-1:exon
so has part: feature:7635098-7635151:-1:exon
so has part: feature:7634584-7634691:-1:exon
so has part: feature:7634350-7634439:-1:exon
so has part: feature:7634120-7634173:-1:exon
so has part: feature:7633804-7633911:-1:exon
so has part: feature:7633582-7633689:-1:exon
so has part: feature:7633398-7633451:-1:exon
so has part: feature:7633242-7633295:-1:exon
so has part: feature:7632988-7633095:-1:exon
so has part: feature:7632734-7632787:-1:exon
so has part: feature:7632482-7632535:-1:exon
so has part: feature:7632244-7632297:-1:exon
so has part: feature:7631882-7631935:-1:exon
so has part: feature:7631461-7631568:-1:exon
so has part: feature:7631048-7631101:-1:exon
so has part: feature:7630817-7630870:-1:exon
so has part: feature:7630669-7630722:-1:exon
so has part: feature:7629932-7629985:-1:exon
so has part: feature:7629582-7629689:-1:exon
so has part: feature:7629437-7629490:-1:exon
so has part: feature:7629265-7629318:-1:exon
so has part: feature:7628935-7629042:-1:exon
so has part: feature:7628748-7628801:-1:exon
so has part: feature:7628412-7628447:-1:exon
so has part: feature:7628179-7628232:-1:exon
so has part: feature:7627817-7628084:-1:exon
so has part: feature:7626577-7626689:-1:exon
so has part: feature:7626077-7626283:-1:exon
so has part: feature:7625244-7625384:-1:exon

XP_019840739.1
type: Protein
SIO_000068: ncbiprotein

position:7625244:-1
position: 7625244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7653474:-1
position: 7653474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7653393-7653474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7650508-7650657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7650180-7650390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7649236-7649398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7647609-7647800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7646472-7646549:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7645761-7645823:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7644792-7645100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7641619-7641738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7641299-7641355:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7641083-7641136:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7640937-7640990:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7640794-7640847:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7640611-7640664:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7640355-7640408:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7640186-7640230:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7640019-7640072:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7639639-7639683:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7639389-7639442:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7639149-7639193:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7638994-7639047:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7638711-7638755:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7638439-7638492:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7638271-7638315:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7637953-7638006:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7637500-7637607:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7636481-7636534:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7636132-7636185:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7636000-7636044:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7635859-7635912:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7635693-7635737:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7635510-7635563:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7635362-7635415:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7635098-7635151:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7634584-7634691:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7634350-7634439:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7634120-7634173:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7633804-7633911:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7633582-7633689:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:7633398-7633451:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:7633242-7633295:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:7632988-7633095:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:7632734-7632787:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:7632482-7632535:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:7632244-7632297:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:7631882-7631935:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:7631461-7631568:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:7631048-7631101:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:7630817-7630870:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:7630669-7630722:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:7629932-7629985:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:7629582-7629689:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:7629437-7629490:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:7629265-7629318:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:7628935-7629042:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:7628748-7628801:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:7628412-7628447:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:7628179-7628232:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:7627817-7628084:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:7626577-7626689:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:7626077-7626283:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:7625244-7625384:-1:exon

RXRB
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: RXRB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7654849..7661574)
location: region:7654849-7661574:-1
so has part: feature:7654849-7661574:-1:exon
subclass of: SO_0000010

109576548
type: Gene
SIO_000068: ncbigene

position:7654849:-1
position: 7654849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7661574:-1
position: 7661574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7654849-7661574:-1:exon

RXRB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RXRB
product: retinoid X receptor beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74 ESTs, 17 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019985181.1
SIO_010081: RXRB
subclass of: SO_0000673
so part of: RXRB
location: complement(join(7654849..7656036,7656147..7656252,7656571..7656662,7656778..7656910,7657123..7657252,7657798..7657970,7659092..7659271,7659615..7659771,7660271..7660610,7660903..7661035,7661265..7661574))
location: region:7654849-7661574:-1
so has part: feature:7661265-7661574:-1:exon
so has part: feature:7660903-7661035:-1:exon
so has part: feature:7660271-7660610:-1:exon
so has part: feature:7659615-7659771:-1:exon
so has part: feature:7659092-7659271:-1:exon
so has part: feature:7657798-7657970:-1:exon
so has part: feature:7657123-7657252:-1:exon
so has part: feature:7656778-7656910:-1:exon
so has part: feature:7656571-7656662:-1:exon
so has part: feature:7656147-7656252:-1:exon
so has part: feature:7654849-7656036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7661265-7661574:-1:exon

position:7661265:-1
position: 7661265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7660903-7661035:-1:exon

position:7660903:-1
position: 7660903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7661035:-1
position: 7661035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7660271-7660610:-1:exon

position:7660271:-1
position: 7660271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7660610:-1
position: 7660610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7659615-7659771:-1:exon

position:7659615:-1
position: 7659615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7659771:-1
position: 7659771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7659092-7659271:-1:exon

position:7659092:-1
position: 7659092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7659271:-1
position: 7659271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7657798-7657970:-1:exon

position:7657798:-1
position: 7657798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7657970:-1
position: 7657970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7657123-7657252:-1:exon

position:7657123:-1
position: 7657123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7657252:-1
position: 7657252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7656778-7656910:-1:exon

position:7656778:-1
position: 7656778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7656910:-1
position: 7656910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7656571-7656662:-1:exon

position:7656571:-1
position: 7656571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7656662:-1
position: 7656662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7656147-7656252:-1:exon

position:7656147:-1
position: 7656147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7656252:-1
position: 7656252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7654849-7656036:-1:exon

position:7656036:-1
position: 7656036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RXRB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RXRB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoic acid receptor RXR-beta
translation: MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPVPCPRGGAARGRFRSPSGGRRRLGSPAVPGAGPQSSSLRTLDVGSLPLGDPRLIFSFCLSCLCVSVPVCTLPRPPDSRSPDSSSPNPLPQGAAPPSPPGPPLPPSAAASLGGSGAPPPPSMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDRILEAEXAVEQKSDQGVEGPGGXGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
SIO_010081: RXRB
subclass of: SO_0000673
so part of: RXRB
location: complement(join(7655889..7656036,7656147..7656252,7656571..7656662,7656778..7656910,7657123..7657252,7657798..7657970,7659092..7659271,7659615..7659771,7660271..7660610,7660903..7661035,7661265..7661400))
location: region:7655889-7661400:-1
so has part: feature:7661265-7661400:-1:exon
so has part: feature:7660903-7661035:-1:exon
so has part: feature:7660271-7660610:-1:exon
so has part: feature:7659615-7659771:-1:exon
so has part: feature:7659092-7659271:-1:exon
so has part: feature:7657798-7657970:-1:exon
so has part: feature:7657123-7657252:-1:exon
so has part: feature:7656778-7656910:-1:exon
so has part: feature:7656571-7656662:-1:exon
so has part: feature:7656147-7656252:-1:exon
so has part: feature:7655889-7656036:-1:exon

XP_019840740.1
type: Protein
SIO_000068: ncbiprotein

position:7655889:-1
position: 7655889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7661400:-1
position: 7661400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7661265-7661400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7660903-7661035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7660271-7660610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7659615-7659771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7659092-7659271:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7657798-7657970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7657123-7657252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7656778-7656910:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7656571-7656662:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7656147-7656252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7655889-7656036:-1:exon

SLC39A7
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: SLC39A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7661638..7666038
location: region:7661638-7666038:1
so has part: feature:7661638-7666038:1:exon
subclass of: SO_0000010

109576592
type: Gene
SIO_000068: ncbigene

position:7661638:1
position: 7661638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7666038:1
position: 7666038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7661638-7666038:1:exon

SLC39A7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SLC39A7
product: solute carrier family 39 member 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 98 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 255 samples with support for all annotated introns
transcript id: XM_019985234.1
SIO_010081: SLC39A7
subclass of: SO_0000673
so part of: SLC39A7
location: join(7661638..7661863,7662172..7662586,7662676..7662844,7663002..7663055,7663189..7663353,7663502..7663642,7663849..7664045,7665173..7666038)
location: region:7661638-7666038:1
so has part: feature:7661638-7661863:1:exon
so has part: feature:7662172-7662586:1:exon
so has part: feature:7662676-7662844:1:exon
so has part: feature:7663002-7663055:1:exon
so has part: feature:7663189-7663353:1:exon
so has part: feature:7663502-7663642:1:exon
so has part: feature:7663849-7664045:1:exon
so has part: feature:7665173-7666038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7661638-7661863:1:exon

position:7661863:1
position: 7661863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7662172-7662586:1:exon

position:7662172:1
position: 7662172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7662586:1
position: 7662586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7662676-7662844:1:exon

position:7662676:1
position: 7662676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7662844:1
position: 7662844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7663002-7663055:1:exon

position:7663002:1
position: 7663002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7663055:1
position: 7663055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7663189-7663353:1:exon

position:7663189:1
position: 7663189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7663353:1
position: 7663353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7663502-7663642:1:exon

position:7663502:1
position: 7663502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7663642:1
position: 7663642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7663849-7664045:1:exon

position:7663849:1
position: 7663849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7664045:1
position: 7664045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7665173-7666038:1:exon

position:7665173:1
position: 7665173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC39A7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SLC39A7
product: solute carrier family 39 member 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 83 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 264 samples with support for all annotated introns
transcript id: XM_019985235.1
SIO_010081: SLC39A7
subclass of: SO_0000673
so part of: SLC39A7
location: join(7661755..7662586,7662676..7662844,7663002..7663055,7663189..7663353,7663502..7663642,7663849..7664045,7665173..7666038)
location: region:7661755-7666038:1
so has part: feature:7661755-7662586:1:exon
so has part: feature:7662676-7662844:1:exon
so has part: feature:7663002-7663055:1:exon
so has part: feature:7663189-7663353:1:exon
so has part: feature:7663502-7663642:1:exon
so has part: feature:7663849-7664045:1:exon
so has part: feature:7665173-7666038:1:exon

position:7661755:1
position: 7661755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7661755-7662586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7662676-7662844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7663002-7663055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7663189-7663353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7663502-7663642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7663849-7664045:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7665173-7666038:1:exon

SLC39A7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SLC39A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc transporter SLC39A7
translation: MARGLGAPRWVAVGLLTWAALGLLVAGHGGHGDLYEDLHEDFHGHSHRHSHEDFHHGHSHAHGHGHTHESIWHGHTHGHDHGHLHEDLHHGHSHGHSHESLHHRGHGHDHEHSHGGSGESGAPGVKQDLDTVTLWAYALGATVLISAAPFFVLFLIPVESNSPRHRSLLQILLSFASGGLLGDAFLHLIPHALEPHSHHPPEQPGHGHSHSGQGPILSVGLWVLSGIVAFLVVEKFVRHVKGGHGHSHGHGHAHGHTHGSHEHGRQERSSKEKQSSEEEEKEAGALRKRRGGSTRPKDGPVRPQNAEEEKAGSDLRVSGYLNLAADLAHNFTDGLAIGASFRGGRGLGILTTMTVLLHEVPHEVGDFAILVQSGCSKKQAMRLQLLTAVGALAGTACALLTEGGAVGSEVAGGAGPGWILPFTAGGFIYVATVSVLPELLREASPLQSLLEVLGLLGGVVMMVLIAHLE
SIO_010081: SLC39A7
subclass of: SO_0000673
so part of: SLC39A7
location: join(7662176..7662586,7662676..7662844,7663002..7663055,7663189..7663353,7663502..7663642,7663849..7664045,7665173..7665445)
location: region:7662176-7665445:1
so has part: feature:7662176-7662586:1:exon
so has part: feature:7662676-7662844:1:exon
so has part: feature:7663002-7663055:1:exon
so has part: feature:7663189-7663353:1:exon
so has part: feature:7663502-7663642:1:exon
so has part: feature:7663849-7664045:1:exon
so has part: feature:7665173-7665445:1:exon

XP_019840793.1
type: Protein
SIO_000068: ncbiprotein

position:7662176:1
position: 7662176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7665445:1
position: 7665445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7662176-7662586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7662676-7662844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7663002-7663055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7663189-7663353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7663502-7663642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7663849-7664045:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7665173-7665445:1:exon

SLC39A7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SLC39A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc transporter SLC39A7
translation: MARGLGAPRWVAVGLLTWAALGLLVAGHGGHGDLYEDLHEDFHGHSHRHSHEDFHHGHSHAHGHGHTHESIWHGHTHGHDHGHLHEDLHHGHSHGHSHESLHHRGHGHDHEHSHGGSGESGAPGVKQDLDTVTLWAYALGATVLISAAPFFVLFLIPVESNSPRHRSLLQILLSFASGGLLGDAFLHLIPHALEPHSHHPPEQPGHGHSHSGQGPILSVGLWVLSGIVAFLVVEKFVRHVKGGHGHSHGHGHAHGHTHGSHEHGRQERSSKEKQSSEEEEKEAGALRKRRGGSTRPKDGPVRPQNAEEEKAGSDLRVSGYLNLAADLAHNFTDGLAIGASFRGGRGLGILTTMTVLLHEVPHEVGDFAILVQSGCSKKQAMRLQLLTAVGALAGTACALLTEGGAVGSEVAGGAGPGWILPFTAGGFIYVATVSVLPELLREASPLQSLLEVLGLLGGVVMMVLIAHLE
SIO_010081: SLC39A7
subclass of: SO_0000673
so part of: SLC39A7
location: join(7662176..7662586,7662676..7662844,7663002..7663055,7663189..7663353,7663502..7663642,7663849..7664045,7665173..7665445)
location: region:7662176-7665445:1
so has part: feature:7662176-7662586:1:exon
so has part: feature:7662676-7662844:1:exon
so has part: feature:7663002-7663055:1:exon
so has part: feature:7663189-7663353:1:exon
so has part: feature:7663502-7663642:1:exon
so has part: feature:7663849-7664045:1:exon
so has part: feature:7665173-7665445:1:exon

XP_019840794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7662176-7662586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7662676-7662844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7663002-7663055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7663189-7663353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7663502-7663642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7663849-7664045:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7665173-7665445:1:exon

HSD17B8
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: HSD17B8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7665933..7689278
location: region:7665933-7689278:1
so has part: feature:7665933-7689278:1:exon
subclass of: SO_0000010

109576549
type: Gene
SIO_000068: ncbigene

position:7665933:1
position: 7665933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7689278:1
position: 7689278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7665933-7689278:1:exon

HSD17B8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: HSD17B8
product: hydroxysteroid 17-beta dehydrogenase 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019985182.1
SIO_010081: HSD17B8
subclass of: SO_0000673
so part of: HSD17B8
location: join(7665933..7666297,7666454..7666671,7666779..7666895,7667011..7667124,7667206..7667291,7667384..7667407,7689197..7689278)
location: region:7665933-7689278:1
so has part: feature:7665933-7666297:1:exon
so has part: feature:7666454-7666671:1:exon
so has part: feature:7666779-7666895:1:exon
so has part: feature:7667011-7667124:1:exon
so has part: feature:7667206-7667291:1:exon
so has part: feature:7667384-7667407:1:exon
so has part: feature:7689197-7689278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7665933-7666297:1:exon

position:7666297:1
position: 7666297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7666454-7666671:1:exon

position:7666454:1
position: 7666454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7666671:1
position: 7666671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7666779-7666895:1:exon

position:7666779:1
position: 7666779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7666895:1
position: 7666895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7667011-7667124:1:exon

position:7667011:1
position: 7667011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7667124:1
position: 7667124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7667206-7667291:1:exon

position:7667206:1
position: 7667206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7667291:1
position: 7667291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7667384-7667407:1:exon

position:7667384:1
position: 7667384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7667407:1
position: 7667407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7689197-7689278:1:exon

position:7689197:1
position: 7689197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HSD17B8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: HSD17B8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: estradiol 17-beta-dehydrogenase 8
translation: MASPLRLRSALALVTGAGGGIGRAISVRLAAEGAAVAACDLDGAAARETVQLLGGPGTEEGAPRGAHAAFQADVSEAGAARRLLEQVQACFSRPPSVVVSCAGITRDEFLLHMSEDNWDKVIAVNLKGIFLVTQAAAQALVSSGCPGSIINISSIIGKVRLSWEEVGNMGQTNYAASKAGVIGLTQSAARELGRHGIRRRRSFSLPALLWNHFSHLARLILKTDVPER
SIO_010081: HSD17B8
subclass of: SO_0000673
so part of: HSD17B8
location: join(7666252..7666297,7666454..7666671,7666779..7666895,7667011..7667124,7667206..7667291,7667384..7667407,7689197..7689278)
location: region:7666252-7689278:1
so has part: feature:7666252-7666297:1:exon
so has part: feature:7666454-7666671:1:exon
so has part: feature:7666779-7666895:1:exon
so has part: feature:7667011-7667124:1:exon
so has part: feature:7667206-7667291:1:exon
so has part: feature:7667384-7667407:1:exon
so has part: feature:7689197-7689278:1:exon

XP_019840741.1
type: Protein
SIO_000068: ncbiprotein

position:7666252:1
position: 7666252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7666252-7666297:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7666454-7666671:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7666779-7666895:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7667011-7667124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7667206-7667291:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7667384-7667407:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7689197-7689278:1:exon

RING1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: RING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7689762..7692780
location: region:7689762-7692780:1
so has part: feature:7689762-7692780:1:exon
subclass of: SO_0000010

109576601
type: Gene
SIO_000068: ncbigene

position:7689762:1
position: 7689762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7692780:1
position: 7692780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7689762-7692780:1:exon

RING1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RING1
product: ring finger protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019985249.1
SIO_010081: RING1
subclass of: SO_0000673
so part of: RING1
location: join(7689762..7689955,7690055..7690270,7691120..7691509,7691686..7691966,7692367..7692780)
location: region:7689762-7692780:1
so has part: feature:7689762-7689955:1:exon
so has part: feature:7690055-7690270:1:exon
so has part: feature:7691120-7691509:1:exon
so has part: feature:7691686-7691966:1:exon
so has part: feature:7692367-7692780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7689762-7689955:1:exon

position:7689955:1
position: 7689955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7690055-7690270:1:exon

position:7690055:1
position: 7690055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7690270:1
position: 7690270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7691120-7691509:1:exon

position:7691120:1
position: 7691120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7691509:1
position: 7691509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7691686-7691966:1:exon

position:7691686:1
position: 7691686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7691966:1
position: 7691966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7692367-7692780:1:exon

position:7692367:1
position: 7692367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RING1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING1
translation: MDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTTTMSGGEGEPGEGEGDGEDVSSDSAPDSAPGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSEDSGDRGGTLGGGTLGPPSPPGAPSPPEPGGEIELVFRPHPLLVEKGEYCQTRYVKTTGNATVDHLSKYLALRIALERRQQQEAGEPGGPGGGTSDPTAGPDGGGGEGGGAGGADGPEEPALPSLEGVSEKQYTIYIAPGGGAFTVMRGSLTLELVNEKFWKVSRPLELCYAPTKDPK
SIO_010081: RING1
subclass of: SO_0000673
so part of: RING1
location: join(7689804..7689955,7690055..7690270,7691120..7691509,7691686..7691966,7692367..7692464)
location: region:7689804-7692464:1
so has part: feature:7689804-7689955:1:exon
so has part: feature:7690055-7690270:1:exon
so has part: feature:7691120-7691509:1:exon
so has part: feature:7691686-7691966:1:exon
so has part: feature:7692367-7692464:1:exon

XP_019840808.1
type: Protein
SIO_000068: ncbiprotein

position:7689804:1
position: 7689804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7692464:1
position: 7692464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7689804-7689955:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7690055-7690270:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7691120-7691509:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7691686-7691966:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7692367-7692464:1:exon

VPS52
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: VPS52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7721929..7739970)
location: region:7721929-7739970:-1
so has part: feature:7721929-7739970:-1:exon
subclass of: SO_0000010

109576587
type: Gene
SIO_000068: ncbigene

position:7721929:-1
position: 7721929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7739970:-1
position: 7739970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7721929-7739970:-1:exon

VPS52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: VPS52
product: VPS52, GARP complex subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 60 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 240 samples with support for all annotated introns
transcript id: XM_019985223.1
SIO_010081: VPS52
subclass of: SO_0000673
so part of: VPS52
location: complement(join(7721929..7722643,7722884..7723002,7723244..7723355,7731495..7731560,7733448..7733555,7733651..7733746,7734021..7734144,7734311..7734429,7734906..7735061,7735325..7735458,7735819..7735876,7736001..7736133,7736207..7736307,7736595..7736745,7737348..7737523,7737803..7737870,7738064..7738139,7738316..7738368,7738521..7738605,7739630..7739970))
location: region:7721929-7739970:-1
so has part: feature:7739630-7739970:-1:exon
so has part: feature:7738521-7738605:-1:exon
so has part: feature:7738316-7738368:-1:exon
so has part: feature:7738064-7738139:-1:exon
so has part: feature:7737803-7737870:-1:exon
so has part: feature:7737348-7737523:-1:exon
so has part: feature:7736595-7736745:-1:exon
so has part: feature:7736207-7736307:-1:exon
so has part: feature:7736001-7736133:-1:exon
so has part: feature:7735819-7735876:-1:exon
so has part: feature:7735325-7735458:-1:exon
so has part: feature:7734906-7735061:-1:exon
so has part: feature:7734311-7734429:-1:exon
so has part: feature:7734021-7734144:-1:exon
so has part: feature:7733651-7733746:-1:exon
so has part: feature:7733448-7733555:-1:exon
so has part: feature:7731495-7731560:-1:exon
so has part: feature:7723244-7723355:-1:exon
so has part: feature:7722884-7723002:-1:exon
so has part: feature:7721929-7722643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7739630-7739970:-1:exon

position:7739630:-1
position: 7739630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7738521-7738605:-1:exon

position:7738521:-1
position: 7738521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7738605:-1
position: 7738605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7738316-7738368:-1:exon

position:7738316:-1
position: 7738316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7738368:-1
position: 7738368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7738064-7738139:-1:exon

position:7738064:-1
position: 7738064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7738139:-1
position: 7738139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7737803-7737870:-1:exon

position:7737803:-1
position: 7737803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7737870:-1
position: 7737870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7737348-7737523:-1:exon

position:7737348:-1
position: 7737348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7737523:-1
position: 7737523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7736595-7736745:-1:exon

position:7736595:-1
position: 7736595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7736745:-1
position: 7736745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7736207-7736307:-1:exon

position:7736207:-1
position: 7736207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7736307:-1
position: 7736307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7736001-7736133:-1:exon

position:7736001:-1
position: 7736001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7736133:-1
position: 7736133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7735819-7735876:-1:exon

position:7735819:-1
position: 7735819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7735876:-1
position: 7735876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7735325-7735458:-1:exon

position:7735325:-1
position: 7735325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7735458:-1
position: 7735458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7734906-7735061:-1:exon

position:7734906:-1
position: 7734906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7735061:-1
position: 7735061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7734311-7734429:-1:exon

position:7734311:-1
position: 7734311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7734429:-1
position: 7734429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7734021-7734144:-1:exon

position:7734021:-1
position: 7734021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7734144:-1
position: 7734144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7733651-7733746:-1:exon

position:7733651:-1
position: 7733651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7733746:-1
position: 7733746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7733448-7733555:-1:exon

position:7733448:-1
position: 7733448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7733555:-1
position: 7733555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7731495-7731560:-1:exon

position:7731495:-1
position: 7731495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7731560:-1
position: 7731560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7723244-7723355:-1:exon

position:7723244:-1
position: 7723244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7723355:-1
position: 7723355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7722884-7723002:-1:exon

position:7722884:-1
position: 7722884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7723002:-1
position: 7723002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7721929-7722643:-1:exon

position:7722643:-1
position: 7722643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: VPS52
product: VPS52, GARP complex subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 240 samples with support for all annotated introns
transcript id: XM_019985225.1
SIO_010081: VPS52
subclass of: SO_0000673
so part of: VPS52
location: complement(join(7721933..7722643,7722884..7723002,7723244..7723355,7731495..7731560,7733448..7733555,7733651..7733746,7734021..7734144,7734311..7734429,7734906..7735061,7735325..7735458,7735819..7735876,7736001..7736133,7736207..7736307,7736595..7736745,7737348..7737523,7737803..7737874,7738064..7738139,7738316..7738368,7738521..7738605,7739630..7739732))
location: region:7721933-7739732:-1
so has part: feature:7739630-7739732:-1:exon
so has part: feature:7738521-7738605:-1:exon
so has part: feature:7738316-7738368:-1:exon
so has part: feature:7738064-7738139:-1:exon
so has part: feature:7737803-7737874:-1:exon
so has part: feature:7737348-7737523:-1:exon
so has part: feature:7736595-7736745:-1:exon
so has part: feature:7736207-7736307:-1:exon
so has part: feature:7736001-7736133:-1:exon
so has part: feature:7735819-7735876:-1:exon
so has part: feature:7735325-7735458:-1:exon
so has part: feature:7734906-7735061:-1:exon
so has part: feature:7734311-7734429:-1:exon
so has part: feature:7734021-7734144:-1:exon
so has part: feature:7733651-7733746:-1:exon
so has part: feature:7733448-7733555:-1:exon
so has part: feature:7731495-7731560:-1:exon
so has part: feature:7723244-7723355:-1:exon
so has part: feature:7722884-7723002:-1:exon
so has part: feature:7721933-7722643:-1:exon

position:7721933:-1
position: 7721933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7739732:-1
position: 7739732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7739630-7739732:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7738521-7738605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7738316-7738368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7738064-7738139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7737803-7737874:-1:exon

position:7737874:-1
position: 7737874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7737348-7737523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7736595-7736745:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7736207-7736307:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7736001-7736133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7735819-7735876:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7735325-7735458:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7734906-7735061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7734311-7734429:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7734021-7734144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7733651-7733746:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7733448-7733555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7731495-7731560:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7723244-7723355:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7722884-7723002:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7721933-7722643:-1:exon

VPS52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: VPS52
product: VPS52, GARP complex subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 43 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_019985224.1
SIO_010081: VPS52
subclass of: SO_0000673
so part of: VPS52
location: complement(join(7721933..7722643,7722884..7723002,7723244..7723355,7731495..7731560,7733448..7733555,7733651..7733746,7734021..7734144,7734311..7734429,7734906..7735061,7735325..7735458,7735819..7735876,7736001..7736133,7736207..7736307,7736595..7736745,7737348..7737523,7737803..7737870,7738064..7738139,7738316..7738368,7738521..7738605,7739465..7739589))
location: region:7721933-7739589:-1
so has part: feature:7739465-7739589:-1:exon
so has part: feature:7738521-7738605:-1:exon
so has part: feature:7738316-7738368:-1:exon
so has part: feature:7738064-7738139:-1:exon
so has part: feature:7737803-7737870:-1:exon
so has part: feature:7737348-7737523:-1:exon
so has part: feature:7736595-7736745:-1:exon
so has part: feature:7736207-7736307:-1:exon
so has part: feature:7736001-7736133:-1:exon
so has part: feature:7735819-7735876:-1:exon
so has part: feature:7735325-7735458:-1:exon
so has part: feature:7734906-7735061:-1:exon
so has part: feature:7734311-7734429:-1:exon
so has part: feature:7734021-7734144:-1:exon
so has part: feature:7733651-7733746:-1:exon
so has part: feature:7733448-7733555:-1:exon
so has part: feature:7731495-7731560:-1:exon
so has part: feature:7723244-7723355:-1:exon
so has part: feature:7722884-7723002:-1:exon
so has part: feature:7721933-7722643:-1:exon

position:7739589:-1
position: 7739589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7739465-7739589:-1:exon

position:7739465:-1
position: 7739465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7738521-7738605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7738316-7738368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7738064-7738139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7737803-7737870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7737348-7737523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7736595-7736745:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7736207-7736307:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7736001-7736133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7735819-7735876:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7735325-7735458:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7734906-7735061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7734311-7734429:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7734021-7734144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7733651-7733746:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7733448-7733555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7731495-7731560:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7723244-7723355:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7722884-7723002:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7721933-7722643:-1:exon

VPS52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: VPS52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 52 homolog isoform X1
translation: MAAAATMXXAARELVLRAGASDMEEEEGPLGSGPGLREPLQIGELDITSDEFILDEVDVHIQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACDAVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSALVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYYRSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPAELEAPILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFMVSGPAAHDLFHAVMGRTLSMTQKHLESYLVDCYDAIAVFLCIHIVLRFRNITAKRDVPALDRYWEQVLALLWPRFELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTMQLLGQLQVEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEFIEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDVMRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHKPNF
SIO_010081: VPS52
subclass of: SO_0000673
so part of: VPS52
location: complement(join(7722497..7722643,7722884..7723002,7723244..7723355,7731495..7731560,7733448..7733555,7733651..7733746,7734021..7734144,7734311..7734429,7734906..7735061,7735325..7735458,7735819..7735876,7736001..7736133,7736207..7736307,7736595..7736745,7737348..7737523,7737803..7737870,7738064..7738139,7738316..7738368,7738521..7738605,7739630..7739719))
location: region:7722497-7739719:-1
so has part: feature:7739630-7739719:-1:exon
so has part: feature:7738521-7738605:-1:exon
so has part: feature:7738316-7738368:-1:exon
so has part: feature:7738064-7738139:-1:exon
so has part: feature:7737803-7737870:-1:exon
so has part: feature:7737348-7737523:-1:exon
so has part: feature:7736595-7736745:-1:exon
so has part: feature:7736207-7736307:-1:exon
so has part: feature:7736001-7736133:-1:exon
so has part: feature:7735819-7735876:-1:exon
so has part: feature:7735325-7735458:-1:exon
so has part: feature:7734906-7735061:-1:exon
so has part: feature:7734311-7734429:-1:exon
so has part: feature:7734021-7734144:-1:exon
so has part: feature:7733651-7733746:-1:exon
so has part: feature:7733448-7733555:-1:exon
so has part: feature:7731495-7731560:-1:exon
so has part: feature:7723244-7723355:-1:exon
so has part: feature:7722884-7723002:-1:exon
so has part: feature:7722497-7722643:-1:exon

XP_019840782.1
type: Protein
SIO_000068: ncbiprotein

position:7722497:-1
position: 7722497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7739719:-1
position: 7739719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7739630-7739719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7738521-7738605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7738316-7738368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7738064-7738139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7737803-7737870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7737348-7737523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7736595-7736745:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7736207-7736307:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7736001-7736133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7735819-7735876:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7735325-7735458:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7734906-7735061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7734311-7734429:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7734021-7734144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7733651-7733746:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7733448-7733555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7731495-7731560:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7723244-7723355:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7722884-7723002:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7722497-7722643:-1:exon

VPS52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: VPS52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 52 homolog isoform X2
translation: MEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSALVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYYRSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPAELEAPILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFMVSGPAAHDLFHAVMGRTLSMTQKHLESYLVDCYDAIAVFLCIHIVLRFRNITAKRDVPALDRYWEQVLALLWPRFELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTMQLLGQLQVEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEFIEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDVMRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHKPNF
SIO_010081: VPS52
subclass of: SO_0000673
so part of: VPS52
location: complement(join(7722497..7722643,7722884..7723002,7723244..7723355,7731495..7731560,7733448..7733555,7733651..7733746,7734021..7734144,7734311..7734429,7734906..7735061,7735325..7735458,7735819..7735876,7736001..7736133,7736207..7736307,7736595..7736745,7737348..7737520))
location: region:7722497-7737520:-1
so has part: feature:7737348-7737520:-1:exon
so has part: feature:7736595-7736745:-1:exon
so has part: feature:7736207-7736307:-1:exon
so has part: feature:7736001-7736133:-1:exon
so has part: feature:7735819-7735876:-1:exon
so has part: feature:7735325-7735458:-1:exon
so has part: feature:7734906-7735061:-1:exon
so has part: feature:7734311-7734429:-1:exon
so has part: feature:7734021-7734144:-1:exon
so has part: feature:7733651-7733746:-1:exon
so has part: feature:7733448-7733555:-1:exon
so has part: feature:7731495-7731560:-1:exon
so has part: feature:7723244-7723355:-1:exon
so has part: feature:7722884-7723002:-1:exon
so has part: feature:7722497-7722643:-1:exon

XP_019840783.1
type: Protein
SIO_000068: ncbiprotein

position:7737520:-1
position: 7737520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7737348-7737520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7736595-7736745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7736207-7736307:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7736001-7736133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7735819-7735876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7735325-7735458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7734906-7735061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7734311-7734429:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7734021-7734144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7733651-7733746:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7733448-7733555:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7731495-7731560:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7723244-7723355:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7722884-7723002:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7722497-7722643:-1:exon

VPS52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: VPS52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 52 homolog isoform X2
translation: MEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSALVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYYRSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPAELEAPILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFMVSGPAAHDLFHAVMGRTLSMTQKHLESYLVDCYDAIAVFLCIHIVLRFRNITAKRDVPALDRYWEQVLALLWPRFELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTMQLLGQLQVEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEFIEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDVMRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHKPNF
SIO_010081: VPS52
subclass of: SO_0000673
so part of: VPS52
location: complement(join(7722497..7722643,7722884..7723002,7723244..7723355,7731495..7731560,7733448..7733555,7733651..7733746,7734021..7734144,7734311..7734429,7734906..7735061,7735325..7735458,7735819..7735876,7736001..7736133,7736207..7736307,7736595..7736745,7737348..7737520))
location: region:7722497-7737520:-1
so has part: feature:7737348-7737520:-1:exon
so has part: feature:7736595-7736745:-1:exon
so has part: feature:7736207-7736307:-1:exon
so has part: feature:7736001-7736133:-1:exon
so has part: feature:7735819-7735876:-1:exon
so has part: feature:7735325-7735458:-1:exon
so has part: feature:7734906-7735061:-1:exon
so has part: feature:7734311-7734429:-1:exon
so has part: feature:7734021-7734144:-1:exon
so has part: feature:7733651-7733746:-1:exon
so has part: feature:7733448-7733555:-1:exon
so has part: feature:7731495-7731560:-1:exon
so has part: feature:7723244-7723355:-1:exon
so has part: feature:7722884-7723002:-1:exon
so has part: feature:7722497-7722643:-1:exon

XP_019840784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7737348-7737520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7736595-7736745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7736207-7736307:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7736001-7736133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7735819-7735876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7735325-7735458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7734906-7735061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7734311-7734429:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7734021-7734144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7733651-7733746:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7733448-7733555:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7731495-7731560:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7723244-7723355:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7722884-7723002:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7722497-7722643:-1:exon

RPS18
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: RPS18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7740041..7744744
location: region:7740041-7744744:1
so has part: feature:7740041-7744744:1:exon
subclass of: SO_0000010

109576598
type: Gene
SIO_000068: ncbigene

position:7740041:1
position: 7740041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7744744:1
position: 7744744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7740041-7744744:1:exon

RPS18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RPS18
product: ribosomal protein S18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 264 samples with support for all annotated introns
transcript id: XM_019985245.1
SIO_010081: RPS18
subclass of: SO_0000673
so part of: RPS18
location: join(7740041..7740129,7740594..7740692,7744042..7744317,7744428..7744519,7744630..7744744)
location: region:7740041-7744744:1
so has part: feature:7740041-7740129:1:exon
so has part: feature:7740594-7740692:1:exon
so has part: feature:7744042-7744317:1:exon
so has part: feature:7744428-7744519:1:exon
so has part: feature:7744630-7744744:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7740041-7740129:1:exon

position:7740129:1
position: 7740129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7740594-7740692:1:exon

position:7740594:1
position: 7740594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7740692:1
position: 7740692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7744042-7744317:1:exon

position:7744042:1
position: 7744042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7744317:1
position: 7744317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7744428-7744519:1:exon

position:7744428:1
position: 7744428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7744519:1
position: 7744519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7744630-7744744:1:exon

position:7744630:1
position: 7744630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPS18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RPS18
product: ribosomal protein S18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 63 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 101 samples with support for all annotated introns
transcript id: XM_019985246.1
SIO_010081: RPS18
subclass of: SO_0000673
so part of: RPS18
location: join(7740041..7740129,7740594..7740692,7744042..7744128,7744216..7744317,7744428..7744519,7744630..7744744)
location: region:7740041-7744744:1
so has part: feature:7740041-7740129:1:exon
so has part: feature:7740594-7740692:1:exon
so has part: feature:7744042-7744128:1:exon
so has part: feature:7744216-7744317:1:exon
so has part: feature:7744428-7744519:1:exon
so has part: feature:7744630-7744744:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7740041-7740129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7740594-7740692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7744042-7744128:1:exon

position:7744128:1
position: 7744128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7744216-7744317:1:exon

position:7744216:1
position: 7744216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7744428-7744519:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7744630-7744744:1:exon

RPS18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RPS18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S18 isoform X1
translation: MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVRTGIGAGAGPGPAWRWGLSGPDPCPACQVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK
SIO_010081: RPS18
subclass of: SO_0000673
so part of: RPS18
location: join(7740127..7740129,7740594..7740692,7744042..7744317,7744428..7744519,7744630..7744705)
location: region:7740127-7744705:1
so has part: feature:7740127-7740129:1:exon
so has part: feature:7740594-7740692:1:exon
so has part: feature:7744042-7744317:1:exon
so has part: feature:7744428-7744519:1:exon
so has part: feature:7744630-7744705:1:exon

XP_019840804.1
type: Protein
SIO_000068: ncbiprotein

position:7740127:1
position: 7740127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7744705:1
position: 7744705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7740127-7740129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7740594-7740692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7744042-7744317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7744428-7744519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7744630-7744705:1:exon

RPS18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RPS18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S18 isoform X2
translation: MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK
SIO_010081: RPS18
subclass of: SO_0000673
so part of: RPS18
location: join(7740127..7740129,7740594..7740692,7744042..7744128,7744216..7744317,7744428..7744519,7744630..7744705)
location: region:7740127-7744705:1
so has part: feature:7740127-7740129:1:exon
so has part: feature:7740594-7740692:1:exon
so has part: feature:7744042-7744128:1:exon
so has part: feature:7744216-7744317:1:exon
so has part: feature:7744428-7744519:1:exon
so has part: feature:7744630-7744705:1:exon

XP_019840805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7740127-7740129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7740594-7740692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7744042-7744128:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7744216-7744317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7744428-7744519:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7744630-7744705:1:exon

B3GALT4
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: B3GALT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7745652..7747112
location: region:7745652-7747112:1
so has part: feature:7745652-7747112:1:exon
subclass of: SO_0000010

109576550
type: Gene
SIO_000068: ncbigene

position:7745652:1
position: 7745652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7747112:1
position: 7747112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7745652-7747112:1:exon

B3GALT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: B3GALT4
product: beta-1,3-galactosyltransferase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019985183.1
SIO_010081: B3GALT4
subclass of: SO_0000673
so part of: B3GALT4
location: join(7745652..7746318,7746600..7747112)
location: region:7745652-7747112:1
so has part: feature:7745652-7746318:1:exon
so has part: feature:7746600-7747112:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7745652-7746318:1:exon

position:7746318:1
position: 7746318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7746600-7747112:1:exon

position:7746600:1
position: 7746600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B3GALT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: B3GALT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,3-galactosyltransferase 4
translation: MRPGLSRRLLLAALLLLLVWTLFGPSGLGEELLSLSLASLLPGPASPGPPLALPRLLIPNEAACGAPGPPPFLLILVCTAPDNLNQRNAIRASWGRLREVRGLRVQTVFLLGEPGWGSRGSDLVWESAAHGDIMQAAFQDSYRNLTLKTLSGLSWADRHCPTARYILKTDDDLAGATHYPLDRCCYGKFLLTSHKLDPWEMQEAWKLVGGSDAERTVPFCSWLQGLLGILRCRLIAWLHS
SIO_010081: B3GALT4
subclass of: SO_0000673
so part of: B3GALT4
location: join(7745803..7746318,7746600..7746806)
location: region:7745803-7746806:1
so has part: feature:7745803-7746318:1:exon
so has part: feature:7746600-7746806:1:exon

XP_019840742.1
type: Protein
SIO_000068: ncbiprotein

position:7745803:1
position: 7745803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7746806:1
position: 7746806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7745803-7746318:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7746600-7746806:1:exon

WDR46
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: WDR46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7747365..7756739)
location: region:7747365-7756739:-1
so has part: feature:7747365-7756739:-1:exon
subclass of: SO_0000010

109576590
type: Gene
SIO_000068: ncbigene

position:7747365:-1
position: 7747365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7756739:-1
position: 7756739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7747365-7756739:-1:exon

WDR46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: WDR46
product: WD repeat domain 46
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 21 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 247 samples with support for all annotated introns
transcript id: XM_019985230.1
SIO_010081: WDR46
subclass of: SO_0000673
so part of: WDR46
location: complement(join(7747365..7747630,7747737..7747850,7747977..7748072,7748216..7748310,7748449..7748762,7754200..7754299,7754612..7754747,7754867..7755017,7755124..7755228,7755466..7755527,7755657..7755744,7755869..7755981,7756116..7756196,7756306..7756500,7756600..7756739))
location: region:7747365-7756739:-1
so has part: feature:7756600-7756739:-1:exon
so has part: feature:7756306-7756500:-1:exon
so has part: feature:7756116-7756196:-1:exon
so has part: feature:7755869-7755981:-1:exon
so has part: feature:7755657-7755744:-1:exon
so has part: feature:7755466-7755527:-1:exon
so has part: feature:7755124-7755228:-1:exon
so has part: feature:7754867-7755017:-1:exon
so has part: feature:7754612-7754747:-1:exon
so has part: feature:7754200-7754299:-1:exon
so has part: feature:7748449-7748762:-1:exon
so has part: feature:7748216-7748310:-1:exon
so has part: feature:7747977-7748072:-1:exon
so has part: feature:7747737-7747850:-1:exon
so has part: feature:7747365-7747630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7756600-7756739:-1:exon

position:7756600:-1
position: 7756600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7756306-7756500:-1:exon

position:7756306:-1
position: 7756306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7756500:-1
position: 7756500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7756116-7756196:-1:exon

position:7756116:-1
position: 7756116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7756196:-1
position: 7756196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7755869-7755981:-1:exon

position:7755869:-1
position: 7755869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7755981:-1
position: 7755981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7755657-7755744:-1:exon

position:7755657:-1
position: 7755657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7755744:-1
position: 7755744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7755466-7755527:-1:exon

position:7755466:-1
position: 7755466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7755527:-1
position: 7755527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7755124-7755228:-1:exon

position:7755124:-1
position: 7755124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7755228:-1
position: 7755228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7754867-7755017:-1:exon

position:7754867:-1
position: 7754867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7755017:-1
position: 7755017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7754612-7754747:-1:exon

position:7754612:-1
position: 7754612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7754747:-1
position: 7754747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7754200-7754299:-1:exon

position:7754200:-1
position: 7754200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7754299:-1
position: 7754299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7748449-7748762:-1:exon

position:7748449:-1
position: 7748449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7748762:-1
position: 7748762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7748216-7748310:-1:exon

position:7748216:-1
position: 7748216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7748310:-1
position: 7748310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7747977-7748072:-1:exon

position:7747977:-1
position: 7747977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7748072:-1
position: 7748072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7747737-7747850:-1:exon

position:7747737:-1
position: 7747737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7747850:-1
position: 7747850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7747365-7747630:-1:exon

position:7747630:-1
position: 7747630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WDR46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: WDR46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 46
translation: METVPEPGSNVPPKKDRLQTKKKKLRRYWEQETTGTAAGASPGPPRKRKRNRELRPQKPKKNDTSKKFRISKKPRELKSPRPQRSLSGAQDPFAGPAPVSVEVVQKYCRIDKSKELPHPKTKTRSRLVVAEAQEEETSVRAARSELLLTEEPGFLEGEDGEDTAKIRQADIVEAVDIASAAKHFDLNLRQFGPYRLNYSRTGRHLAFGGRRGHVAALDWVTKKLMCEINVMEAVRDIRFLHSEALLAVAQNRWLHIYDNQGIELHCVRRCDRVTRLEFLPFHFLLATASETGFLTYLDVSVGKIVAALNARAGRLSVMTQNPYNAVIHLGHSNGTVSLWSPAMKEPLVKILCHRGGVRAVAVDSTGMHMATSGLDHQLKVFDLRGTFQPLSARTLPQGAGHLAFSQRGLLAAGMGDVVNIWAGQGKASPPSLEQXYLTHRLSGHVHGLQFCPYEDVLGVGHSGGITSMLVPGAAEPNFDGLESNPYRSRKQRQEWEVKALLEKVPAELICLDPRALAEVDVISLEQAKKERAERLGYDPDARAPFQPKPKQKGRSSTASLVKRKRKVMDQEHRDKIRQSLEQQLQKQEKAKPTGARPSALDRFXR
SIO_010081: WDR46
subclass of: SO_0000673
so part of: WDR46
location: complement(join(7747532..7747630,7747737..7747850,7747977..7748072,7748216..7748310,7748449..7748762,7754200..7754299,7754612..7754747,7754867..7755017,7755124..7755228,7755466..7755527,7755657..7755744,7755869..7755981,7756116..7756196,7756306..7756500,7756600..7756668))
location: region:7747532-7756668:-1
so has part: feature:7756600-7756668:-1:exon
so has part: feature:7756306-7756500:-1:exon
so has part: feature:7756116-7756196:-1:exon
so has part: feature:7755869-7755981:-1:exon
so has part: feature:7755657-7755744:-1:exon
so has part: feature:7755466-7755527:-1:exon
so has part: feature:7755124-7755228:-1:exon
so has part: feature:7754867-7755017:-1:exon
so has part: feature:7754612-7754747:-1:exon
so has part: feature:7754200-7754299:-1:exon
so has part: feature:7748449-7748762:-1:exon
so has part: feature:7748216-7748310:-1:exon
so has part: feature:7747977-7748072:-1:exon
so has part: feature:7747737-7747850:-1:exon
so has part: feature:7747532-7747630:-1:exon

XP_019840789.1
type: Protein
SIO_000068: ncbiprotein

position:7747532:-1
position: 7747532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7756668:-1
position: 7756668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7756600-7756668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7756306-7756500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7756116-7756196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7755869-7755981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7755657-7755744:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7755466-7755527:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7755124-7755228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7754867-7755017:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7754612-7754747:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7754200-7754299:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7748449-7748762:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7748216-7748310:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7747977-7748072:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7747737-7747850:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7747532-7747630:-1:exon

PFDN6
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PFDN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7757053..7758372
location: region:7757053-7758372:1
so has part: feature:7757053-7758372:1:exon
subclass of: SO_0000010

109576600
type: Gene
SIO_000068: ncbigene

position:7757053:1
position: 7757053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7758372:1
position: 7758372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7757053-7758372:1:exon

PFDN6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PFDN6
product: prefoldin subunit 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 263 samples with support for all annotated introns
transcript id: XM_019985247.1
SIO_010081: PFDN6
subclass of: SO_0000673
so part of: PFDN6
location: join(7757053..7757163,7757310..7757388,7757631..7757701,7757783..7757907,7758143..7758372)
location: region:7757053-7758372:1
so has part: feature:7757053-7757163:1:exon
so has part: feature:7757310-7757388:1:exon
so has part: feature:7757631-7757701:1:exon
so has part: feature:7757783-7757907:1:exon
so has part: feature:7758143-7758372:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7757053-7757163:1:exon

position:7757163:1
position: 7757163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7757310-7757388:1:exon

position:7757310:1
position: 7757310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7757388:1
position: 7757388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7757631-7757701:1:exon

position:7757631:1
position: 7757631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7757701:1
position: 7757701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7757783-7757907:1:exon

position:7757783:1
position: 7757783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7757907:1
position: 7757907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7758143-7758372:1:exon

position:7758143:1
position: 7758143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PFDN6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PFDN6
product: prefoldin subunit 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 256 samples with support for all annotated introns
transcript id: XM_019985248.1
SIO_010081: PFDN6
subclass of: SO_0000673
so part of: PFDN6
location: join(7757056..7757163,7757245..7757388,7757631..7757701,7757783..7757907,7758143..7758372)
location: region:7757056-7758372:1
so has part: feature:7757056-7757163:1:exon
so has part: feature:7757245-7757388:1:exon
so has part: feature:7757631-7757701:1:exon
so has part: feature:7757783-7757907:1:exon
so has part: feature:7758143-7758372:1:exon

position:7757056:1
position: 7757056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7757056-7757163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7757245-7757388:1:exon

position:7757245:1
position: 7757245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7757631-7757701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7757783-7757907:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7758143-7758372:1:exon

PFDN6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PFDN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prefoldin subunit 6
translation: MAELIQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLEQQSEQQRETLAQLQQEFQRAQAAKAGAPGKA
SIO_010081: PFDN6
subclass of: SO_0000673
so part of: PFDN6
location: join(7757325..7757388,7757631..7757701,7757783..7757907,7758143..7758272)
location: region:7757325-7758272:1
so has part: feature:7757325-7757388:1:exon
so has part: feature:7757631-7757701:1:exon
so has part: feature:7757783-7757907:1:exon
so has part: feature:7758143-7758272:1:exon

XP_019840806.1
type: Protein
SIO_000068: ncbiprotein

position:7757325:1
position: 7757325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7758272:1
position: 7758272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7757325-7757388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7757631-7757701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7757783-7757907:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7758143-7758272:1:exon

PFDN6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PFDN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prefoldin subunit 6
translation: MAELIQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLEQQSEQQRETLAQLQQEFQRAQAAKAGAPGKA
SIO_010081: PFDN6
subclass of: SO_0000673
so part of: PFDN6
location: join(7757325..7757388,7757631..7757701,7757783..7757907,7758143..7758272)
location: region:7757325-7758272:1
so has part: feature:7757325-7757388:1:exon
so has part: feature:7757631-7757701:1:exon
so has part: feature:7757783-7757907:1:exon
so has part: feature:7758143-7758272:1:exon

XP_019840807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7757325-7757388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7757631-7757701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7757783-7757907:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7758143-7758272:1:exon

RGL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: RGL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7759145..7766764)
location: region:7759145-7766764:-1
so has part: feature:7759145-7766764:-1:exon
subclass of: SO_0000010

109576584
type: Gene
SIO_000068: ncbigene

position:7759145:-1
position: 7759145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7766764:-1
position: 7766764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7759145-7766764:-1:exon

RGL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RGL2
product: ral guanine nucleotide dissociation stimulator like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 78 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_019985218.1
SIO_010081: RGL2
subclass of: SO_0000673
so part of: RGL2
location: complement(join(7759145..7759819,7759940..7760054,7760582..7760872,7760980..7761091,7761174..7761269,7761365..7761486,7761606..7761638,7762164..7762238,7762401..7762469,7762548..7762632,7762725..7762828,7762915..7763166,7763437..7763734,7763823..7763873,7764439..7764522,7765781..7765980,7766181..7766764))
location: region:7759145-7766764:-1
so has part: feature:7766181-7766764:-1:exon
so has part: feature:7765781-7765980:-1:exon
so has part: feature:7764439-7764522:-1:exon
so has part: feature:7763823-7763873:-1:exon
so has part: feature:7763437-7763734:-1:exon
so has part: feature:7762915-7763166:-1:exon
so has part: feature:7762725-7762828:-1:exon
so has part: feature:7762548-7762632:-1:exon
so has part: feature:7762401-7762469:-1:exon
so has part: feature:7762164-7762238:-1:exon
so has part: feature:7761606-7761638:-1:exon
so has part: feature:7761365-7761486:-1:exon
so has part: feature:7761174-7761269:-1:exon
so has part: feature:7760980-7761091:-1:exon
so has part: feature:7760582-7760872:-1:exon
so has part: feature:7759940-7760054:-1:exon
so has part: feature:7759145-7759819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7766181-7766764:-1:exon

position:7766181:-1
position: 7766181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7765781-7765980:-1:exon

position:7765781:-1
position: 7765781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7765980:-1
position: 7765980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7764439-7764522:-1:exon

position:7764439:-1
position: 7764439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7764522:-1
position: 7764522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7763823-7763873:-1:exon

position:7763823:-1
position: 7763823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7763873:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:7763437-7763734:-1:exon

position:7763437:-1
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reference: sequence
type: ReverseStrandPosition
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position:7763734:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:7762915-7763166:-1:exon

position:7762915:-1
position: 7762915
reference: sequence
type: ReverseStrandPosition
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position:7763166:-1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:7762725-7762828:-1:exon

position:7762725:-1
position: 7762725
reference: sequence
type: ReverseStrandPosition
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position:7762828:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:7762548-7762632:-1:exon

position:7762548:-1
position: 7762548
reference: sequence
type: ReverseStrandPosition
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position:7762632:-1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:7762401-7762469:-1:exon

position:7762401:-1
position: 7762401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7762469:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:7762164-7762238:-1:exon

position:7762164:-1
position: 7762164
reference: sequence
type: ReverseStrandPosition
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position:7762238:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:7761606-7761638:-1:exon

position:7761606:-1
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reference: sequence
type: ReverseStrandPosition
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position:7761638:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:7761365-7761486:-1:exon

position:7761365:-1
position: 7761365
reference: sequence
type: ReverseStrandPosition
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position:7761486:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:7761174-7761269:-1:exon

position:7761174:-1
position: 7761174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7761269:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:7760980-7761091:-1:exon

position:7760980:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7761091:-1
position: 7761091
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:7760582-7760872:-1:exon

position:7760582:-1
position: 7760582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7760872:-1
position: 7760872
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:7759940-7760054:-1:exon

position:7759940:-1
position: 7759940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7760054:-1
position: 7760054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7759145-7759819:-1:exon

position:7759819:-1
position: 7759819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RGL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RGL2
product: ral guanine nucleotide dissociation stimulator like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 89 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_019985216.1
SIO_010081: RGL2
subclass of: SO_0000673
so part of: RGL2
location: complement(join(7759145..7759819,7759940..7760054,7760582..7760872,7760980..7761091,7761174..7761269,7761365..7761486,7761606..7761638,7762164..7762238,7762401..7762469,7762548..7762632,7762725..7762828,7762915..7763166,7763437..7763734,7763823..7763873,7764003..7764181,7764439..7764522,7765781..7765980,7766181..7766764))
location: region:7759145-7766764:-1
so has part: feature:7766181-7766764:-1:exon
so has part: feature:7765781-7765980:-1:exon
so has part: feature:7764439-7764522:-1:exon
so has part: feature:7764003-7764181:-1:exon
so has part: feature:7763823-7763873:-1:exon
so has part: feature:7763437-7763734:-1:exon
so has part: feature:7762915-7763166:-1:exon
so has part: feature:7762725-7762828:-1:exon
so has part: feature:7762548-7762632:-1:exon
so has part: feature:7762401-7762469:-1:exon
so has part: feature:7762164-7762238:-1:exon
so has part: feature:7761606-7761638:-1:exon
so has part: feature:7761365-7761486:-1:exon
so has part: feature:7761174-7761269:-1:exon
so has part: feature:7760980-7761091:-1:exon
so has part: feature:7760582-7760872:-1:exon
so has part: feature:7759940-7760054:-1:exon
so has part: feature:7759145-7759819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7766181-7766764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7765781-7765980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7764439-7764522:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7764003-7764181:-1:exon

position:7764003:-1
position: 7764003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7764181:-1
position: 7764181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7763823-7763873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7763437-7763734:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7762915-7763166:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7762725-7762828:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7762548-7762632:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7762401-7762469:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7762164-7762238:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7761606-7761638:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7761365-7761486:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7761174-7761269:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7760980-7761091:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7760582-7760872:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7759940-7760054:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7759145-7759819:-1:exon

RGL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RGL2
product: ral guanine nucleotide dissociation stimulator like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 81 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_019985217.1
SIO_010081: RGL2
subclass of: SO_0000673
so part of: RGL2
location: complement(join(7759145..7759819,7759940..7760054,7760582..7760872,7760980..7761091,7761174..7761269,7761365..7761486,7761606..7761638,7762164..7762238,7762401..7762469,7762548..7762632,7762725..7762828,7762915..7763166,7763437..7763734,7763823..7763873,7764003..7764181,7764439..7764522,7766181..7766291))
location: region:7759145-7766291:-1
so has part: feature:7766181-7766291:-1:exon
so has part: feature:7764439-7764522:-1:exon
so has part: feature:7764003-7764181:-1:exon
so has part: feature:7763823-7763873:-1:exon
so has part: feature:7763437-7763734:-1:exon
so has part: feature:7762915-7763166:-1:exon
so has part: feature:7762725-7762828:-1:exon
so has part: feature:7762548-7762632:-1:exon
so has part: feature:7762401-7762469:-1:exon
so has part: feature:7762164-7762238:-1:exon
so has part: feature:7761606-7761638:-1:exon
so has part: feature:7761365-7761486:-1:exon
so has part: feature:7761174-7761269:-1:exon
so has part: feature:7760980-7761091:-1:exon
so has part: feature:7760582-7760872:-1:exon
so has part: feature:7759940-7760054:-1:exon
so has part: feature:7759145-7759819:-1:exon

position:7766291:-1
position: 7766291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7766181-7766291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7764439-7764522:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7764003-7764181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7763823-7763873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7763437-7763734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7762915-7763166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7762725-7762828:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7762548-7762632:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7762401-7762469:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7762164-7762238:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7761606-7761638:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7761365-7761486:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7761174-7761269:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7760980-7761091:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7760582-7760872:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7759940-7760054:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7759145-7759819:-1:exon

RGL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RGL2
product: ral guanine nucleotide dissociation stimulator like 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 75 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_019985219.1
SIO_010081: RGL2
subclass of: SO_0000673
so part of: RGL2
location: complement(join(7759145..7759819,7759940..7760054,7760582..7760872,7760980..7761091,7761174..7761269,7761365..7761486,7761606..7761638,7762164..7762238,7762401..7762469,7762548..7762632,7762725..7762828,7762915..7763166,7763437..7763734,7763823..7763873,7764439..7764522,7765208..7765772))
location: region:7759145-7765772:-1
so has part: feature:7765208-7765772:-1:exon
so has part: feature:7764439-7764522:-1:exon
so has part: feature:7763823-7763873:-1:exon
so has part: feature:7763437-7763734:-1:exon
so has part: feature:7762915-7763166:-1:exon
so has part: feature:7762725-7762828:-1:exon
so has part: feature:7762548-7762632:-1:exon
so has part: feature:7762401-7762469:-1:exon
so has part: feature:7762164-7762238:-1:exon
so has part: feature:7761606-7761638:-1:exon
so has part: feature:7761365-7761486:-1:exon
so has part: feature:7761174-7761269:-1:exon
so has part: feature:7760980-7761091:-1:exon
so has part: feature:7760582-7760872:-1:exon
so has part: feature:7759940-7760054:-1:exon
so has part: feature:7759145-7759819:-1:exon

position:7765772:-1
position: 7765772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7765208-7765772:-1:exon

position:7765208:-1
position: 7765208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7764439-7764522:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7763823-7763873:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7763437-7763734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7762915-7763166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7762725-7762828:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7762548-7762632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7762401-7762469:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7762164-7762238:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7761606-7761638:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7761365-7761486:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7761174-7761269:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7760980-7761091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7760582-7760872:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7759940-7760054:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7759145-7759819:-1:exon

RGL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RGL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ral guanine nucleotide dissociation stimulator-like 2 isoform X1
translation: MLPRPLRLLWDTSPPGGVVLSSFRSRDPEEGGGPSGRGGGGGQEEEDDDDDDEAPVSVWEEEEDGATFTVTSRQYQPLDSLAPRPPLRSSRKLRAGTLEALVRHLLDARTSGADMTFTAAFLATHRAFTSTPALLGLMVDRLEALESHPADELERTKXVAISVLSTWLASHPEDFGSEVKGQLDRLESFFLRTGYAAGEGIVGGGADLIRNLRSRVDPQTPELPKPLALPGDPPADPTDVLVYLADHLAEQLTLLDAELFLNLVPSQCLGGLWGHRDRPGHSHLCPSVRATVTQFNKVAGAVVSSVLGATSTGEGLGDVTVRPLRPPQRARLLEKWIRVAEECRLLRNFSSVYAVVSALQSSPIHRLRAAWGEATRDSLRVFSSLCQIFSEEDNYSQSRELLLQEVKLQPSLEPNSKKSPRSASRGGGVVPYLGTFLKDLVMLDAASKDELENGYINFDKRRKEFAVLSELRRLQNECRGYDLRPDPDIQRWLQGLRPLTEAQSHRVSCEVETPGSGDPPAPRVLRPTLVISQWTEVLGSVGGPTPLVSWDRPSVGAEEVPGTPAPLLTRLAQHMKWPSVSSLDSALESTPALQSPADPSHLSPPASSPRPSRGHRRSASCGSPLSGGAEGASKGPGCGGGAPGPGTSDCRIIRVQMELGEDGSVYKSILVTSQDKAPSVISRVLKKNNRDSAVASEYELVQLLPGERELTIPASANVFYAMDGASHDFLLRQRRRRPSSATVGLTSGPSASGTPPSEGGGGSFPRIKATGRKIARALF
SIO_010081: RGL2
subclass of: SO_0000673
so part of: RGL2
location: complement(join(7759605..7759819,7759940..7760054,7760582..7760872,7760980..7761091,7761174..7761269,7761365..7761486,7761606..7761638,7762164..7762238,7762401..7762469,7762548..7762632,7762725..7762828,7762915..7763166,7763437..7763734,7763823..7763873,7764003..7764181,7764439..7764522,7765781..7765939))
location: region:7759605-7765939:-1
so has part: feature:7765781-7765939:-1:exon
so has part: feature:7764439-7764522:-1:exon
so has part: feature:7764003-7764181:-1:exon
so has part: feature:7763823-7763873:-1:exon
so has part: feature:7763437-7763734:-1:exon
so has part: feature:7762915-7763166:-1:exon
so has part: feature:7762725-7762828:-1:exon
so has part: feature:7762548-7762632:-1:exon
so has part: feature:7762401-7762469:-1:exon
so has part: feature:7762164-7762238:-1:exon
so has part: feature:7761606-7761638:-1:exon
so has part: feature:7761365-7761486:-1:exon
so has part: feature:7761174-7761269:-1:exon
so has part: feature:7760980-7761091:-1:exon
so has part: feature:7760582-7760872:-1:exon
so has part: feature:7759940-7760054:-1:exon
so has part: feature:7759605-7759819:-1:exon

XP_019840775.1
type: Protein
SIO_000068: ncbiprotein

position:7759605:-1
position: 7759605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7765939:-1
position: 7765939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7765781-7765939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7764439-7764522:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7764003-7764181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7763823-7763873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7763437-7763734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7762915-7763166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7762725-7762828:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7762548-7762632:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7762401-7762469:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7762164-7762238:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7761606-7761638:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7761365-7761486:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7761174-7761269:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7760980-7761091:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7760582-7760872:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7759940-7760054:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7759605-7759819:-1:exon

RGL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RGL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ral guanine nucleotide dissociation stimulator-like 2 isoform X3
translation: MVLPLQSQVASISLLIPWLEALESHPADELERTKXVAISVLSTWLASHPEDFGSEVKGQLDRLESFFLRTGYAAGEGIVGGGADLIRNLRSRVDPQTPELPKPLALPGDPPADPTDVLVYLADHLAEQLTLLDAELFLNLVPSQCLGGLWGHRDRPGHSHLCPSVRATVTQFNKVAGAVVSSVLGATSTGEGLGDVTVRPLRPPQRARLLEKWIRVAEECRLLRNFSSVYAVVSALQSSPIHRLRAAWGEATRDSLRVFSSLCQIFSEEDNYSQSRELLLQEVKLQPSLEPNSKKSPRSASRGGGVVPYLGTFLKDLVMLDAASKDELENGYINFDKRRKEFAVLSELRRLQNECRGYDLRPDPDIQRWLQGLRPLTEAQSHRVSCEVETPGSGDPPAPRVLRPTLVISQWTEVLGSVGGPTPLVSWDRPSVGAEEVPGTPAPLLTRLAQHMKWPSVSSLDSALESTPALQSPADPSHLSPPASSPRPSRGHRRSASCGSPLSGGAEGASKGPGCGGGAPGPGTSDCRIIRVQMELGEDGSVYKSILVTSQDKAPSVISRVLKKNNRDSAVASEYELVQLLPGERELTIPASANVFYAMDGASHDFLLRQRRRRPSSATVGLTSGPSASGTPPSEGGGGSFPRIKATGRKIARALF
SIO_010081: RGL2
subclass of: SO_0000673
so part of: RGL2
location: complement(join(7759605..7759819,7759940..7760054,7760582..7760872,7760980..7761091,7761174..7761269,7761365..7761486,7761606..7761638,7762164..7762238,7762401..7762469,7762548..7762632,7762725..7762828,7762915..7763166,7763437..7763734,7763823..7763873,7764439..7764491))
location: region:7759605-7764491:-1
so has part: feature:7764439-7764491:-1:exon
so has part: feature:7763823-7763873:-1:exon
so has part: feature:7763437-7763734:-1:exon
so has part: feature:7762915-7763166:-1:exon
so has part: feature:7762725-7762828:-1:exon
so has part: feature:7762548-7762632:-1:exon
so has part: feature:7762401-7762469:-1:exon
so has part: feature:7762164-7762238:-1:exon
so has part: feature:7761606-7761638:-1:exon
so has part: feature:7761365-7761486:-1:exon
so has part: feature:7761174-7761269:-1:exon
so has part: feature:7760980-7761091:-1:exon
so has part: feature:7760582-7760872:-1:exon
so has part: feature:7759940-7760054:-1:exon
so has part: feature:7759605-7759819:-1:exon

XP_019840777.1
type: Protein
SIO_000068: ncbiprotein

position:7764491:-1
position: 7764491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition