Bos indicus isolate QUIL7308 breed Nelore chromosome 17, Bos_indicus_1.0, whole genome shotgun sequence.
type: Entry
definition: Bos indicus isolate QUIL7308 breed Nelore chromosome 17, Bos_indicus_1.0, whole genome shotgun sequence.
sequence version: NC_032666.1
sequence date: 2017-01-12
sequence: sequence
division: CON
label: NC_032666.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA360096
dblink: SAMN02953802
keyword: WGS
keyword: RefSeq
source: Bos indicus (Bos taurus indicus)
organism: Bos indicus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos.
reference: 1
references: 22315242
reference: 2
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003037.1.\nAssembly name: Bos_indicus_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Genoa Biotecnologia SA on\n2014/11/25. The original whole-genome shotgun project has the\naccession AGFL00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Genoa Biotecnologia SA\nAssembly Method :: BWA v. 0.5.9\nAssembly Name :: Bos_indicus_1.0\nReference-guided Assembly :: GCF_000003205.2; Btau_4.0\nGenome Coverage :: 52x\nSequencing Technology :: SOLiD\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Bos indicus Annotation Release 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 76519027
topology: linear
so has quality: SO_0000987
location: 1..76519027
location: region:1-76519027:1
RO_0002162: 9915

NC_032666
type: RefSeq
SIO_000068: refseq

PRJNA360096
type: BioProject
SIO_000068: bioproject

SAMN02953802
type: BioSample
SIO_000068: biosample

1
title: Genome sequence and assembly of Bos indicus
author: Canavez, F.C.
author: Luche, D.D.
author: Stothard, P.
author: Leite, K.R.
author: Sousa-Canavez, J.M.
author: Plastow, G.
author: Meidanis, J.
author: Souza, M.A.
author: Feijao, P.
author: Moore, S.S.
author: Camara-Lopes, L.H.
journal: J. Hered.
volume: 103
issue: 3
pages: 342-348
year: 2012
pubmed: 22315242

22315242
type: PubMed
SIO_000068: pubmed

2
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76519027:1
position: 76519027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-76519027:1:source
so part of: sequence
organism: Bos indicus
mol type: genomic DNA
isolate: QUIL7308
chromosome: 17
sex: male
tissue type: peripheral blood mononuclear cells
country: Brazil
breed: Nelore
note: animal owned by Agropecuaria Quilombo Inc.

9915
type: Taxonomy
SIO_000068: taxonomy

LOC109570848
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109570848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(50142..51085)
location: region:50142-51085:-1
so has part: feature:50142-51085:-1:exon

109570848
type: Gene
SIO_000068: ncbigene

position:50142:-1
position: 50142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51085:-1
position: 51085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50142-51085:-1:exon

LOC109570848
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109570848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC109570848
subclass of: SO_0000673
so part of: LOC109570848
location: complement(50142..51085)
location: region:50142-51085:-1
so has part: feature:50142-51085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50142-51085:-1:exon

LOC109570849
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109570849
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(69620..70595)
location: region:69620-70595:-1
so has part: feature:69620-70595:-1:exon

109570849
type: Gene
SIO_000068: ncbigene

position:69620:-1
position: 69620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70595:-1
position: 70595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69620-70595:-1:exon

LOC109570849
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109570849
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC109570849
subclass of: SO_0000673
so part of: LOC109570849
location: complement(69620..70595)
location: region:69620-70595:-1
so has part: feature:69620-70595:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69620-70595:-1:exon

LOC109571109
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(73662..77508)
location: region:73662-77508:-1
so has part: feature:73662-77508:-1:exon

109571109
type: Gene
SIO_000068: ncbigene

position:73662:-1
position: 73662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77508:-1
position: 77508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73662-77508:-1:exon

LOC109571109
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109571109
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC109571109
subclass of: SO_0000673
so part of: LOC109571109
location: complement(73662..74482)
location: region:73662-74482:-1
so has part: feature:73662-74482:-1:exon

position:74482:-1
position: 74482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73662-74482:-1:exon

LOC109571109
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109571109
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC109571109
subclass of: SO_0000673
so part of: LOC109571109
location: complement(77400..77508)
location: region:77400-77508:-1
so has part: feature:77400-77508:-1:exon

position:77400:-1
position: 77400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77400-77508:-1:exon

LOC109570850
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109570850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(80560..83480)
location: region:80560-83480:-1
so has part: feature:80560-83480:-1:exon

109570850
type: Gene
SIO_000068: ncbigene

position:80560:-1
position: 80560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83480:-1
position: 83480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80560-83480:-1:exon

LOC109570850
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109570850
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109570850
subclass of: SO_0000673
so part of: LOC109570850
location: complement(80560..80884)
location: region:80560-80884:-1
so has part: feature:80560-80884:-1:exon

position:80884:-1
position: 80884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80560-80884:-1:exon

LOC109570850
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109570850
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109570850
subclass of: SO_0000673
so part of: LOC109570850
location: complement(82169..83480)
location: region:82169-83480:-1
so has part: feature:82169-83480:-1:exon

position:82169:-1
position: 82169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82169-83480:-1:exon

LOC109570851
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109570851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(101804..105611)
location: region:101804-105611:-1
so has part: feature:101804-105611:-1:exon

109570851
type: Gene
SIO_000068: ncbigene

position:101804:-1
position: 101804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105611:-1
position: 105611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101804-105611:-1:exon

LOC109570851
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109570851
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC109570851
subclass of: SO_0000673
so part of: LOC109570851
location: complement(101804..102796)
location: region:101804-102796:-1
so has part: feature:101804-102796:-1:exon

position:102796:-1
position: 102796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101804-102796:-1:exon

LOC109570851
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109570851
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC109570851
subclass of: SO_0000673
so part of: LOC109570851
location: complement(105507..105611)
location: region:105507-105611:-1
so has part: feature:105507-105611:-1:exon

position:105507:-1
position: 105507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105507-105611:-1:exon

TMEM192
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TMEM192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(148551..179146)
location: region:148551-179146:-1
so has part: feature:148551-179146:-1:exon
subclass of: SO_0000010

109571429
type: Gene
SIO_000068: ncbigene

position:148551:-1
position: 148551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179146:-1
position: 179146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148551-179146:-1:exon

TMEM192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TMEM192
product: transmembrane protein 192, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 120 samples with support for all annotated introns
transcript id: XM_019977901.1
SIO_010081: TMEM192
subclass of: SO_0000673
so part of: TMEM192
location: complement(join(148551..151032,151349..151451,165337..165601,170187..170333,179040..179146))
location: region:148551-179146:-1
so has part: feature:179040-179146:-1:exon
so has part: feature:170187-170333:-1:exon
so has part: feature:165337-165601:-1:exon
so has part: feature:151349-151451:-1:exon
so has part: feature:148551-151032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179040-179146:-1:exon

position:179040:-1
position: 179040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170187-170333:-1:exon

position:170187:-1
position: 170187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170333:-1
position: 170333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:165337-165601:-1:exon

position:165337:-1
position: 165337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165601:-1
position: 165601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:151349-151451:-1:exon

position:151349:-1
position: 151349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151451:-1
position: 151451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:148551-151032:-1:exon

position:151032:-1
position: 151032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TMEM192
product: transmembrane protein 192, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 227 samples with support for all annotated introns
transcript id: XM_019977900.1
SIO_010081: TMEM192
subclass of: SO_0000673
so part of: TMEM192
location: complement(join(148551..151032,151349..151451,158757..158891,165337..165601,170187..170333,179040..179146))
location: region:148551-179146:-1
so has part: feature:179040-179146:-1:exon
so has part: feature:170187-170333:-1:exon
so has part: feature:165337-165601:-1:exon
so has part: feature:158757-158891:-1:exon
so has part: feature:151349-151451:-1:exon
so has part: feature:148551-151032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179040-179146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170187-170333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:165337-165601:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158757-158891:-1:exon

position:158757:-1
position: 158757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158891:-1
position: 158891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:151349-151451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148551-151032:-1:exon

TMEM192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TMEM192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 192 isoform X2
translation: MEDGSLDLIQSIEDDPLLDTQHLPHHSLHAHFRPRFHPLPTVIIANLLLLIHLVFVILAFLTGVLCSYPNPMEDKCPGNYTNPLKVQTVIILGKVILWILYFLLERYIQYHHCKVRNRGYNKIYRSTRHLKRLPLMIHSTVKIQKFNKAKPQPDVLEEEKIYAYSNNITSETGFRPLSSLEELVEKQGDIIVYLKRHNALLSQRLLAFSSSDLGSQPSGI
SIO_010081: TMEM192
subclass of: SO_0000673
so part of: TMEM192
location: complement(join(150894..151032,151349..151451,165337..165601,170187..170333,179040..179048))
location: region:150894-179048:-1
so has part: feature:179040-179048:-1:exon
so has part: feature:170187-170333:-1:exon
so has part: feature:165337-165601:-1:exon
so has part: feature:151349-151451:-1:exon
so has part: feature:150894-151032:-1:exon

XP_019833460.1
type: Protein
SIO_000068: ncbiprotein

position:150894:-1
position: 150894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179048:-1
position: 179048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179040-179048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170187-170333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:165337-165601:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151349-151451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150894-151032:-1:exon

TMEM192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TMEM192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 192 isoform X1
translation: MEDGSLDLIQSIEDDPLLDTQHLPHHSLHAHFRPRFHPLPTVIIANLLLLIHLVFVILAFLTGVLCSYPNPMEDKCPGNYTNPLKVQTVIILGKVILWILYFLLERYIQYHHCKVRNRGYNKIYRSTRHLKRLPLMIHSTGSTALLLLLCLQHSFPEPSTWYLDLILATLALELICSLTCLLVYTVKIQKFNKAKPQPDVLEEEKIYAYSNNITSETGFRPLSSLEELVEKQGDIIVYLKRHNALLSQRLLAFSSSDLGSQPSGI
SIO_010081: TMEM192
subclass of: SO_0000673
so part of: TMEM192
location: complement(join(150894..151032,151349..151451,158757..158891,165337..165601,170187..170333,179040..179048))
location: region:150894-179048:-1
so has part: feature:179040-179048:-1:exon
so has part: feature:170187-170333:-1:exon
so has part: feature:165337-165601:-1:exon
so has part: feature:158757-158891:-1:exon
so has part: feature:151349-151451:-1:exon
so has part: feature:150894-151032:-1:exon

XP_019833459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179040-179048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170187-170333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:165337-165601:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158757-158891:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151349-151451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150894-151032:-1:exon

LOC109571042
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571042
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(285125..285456)
location: region:285125-285456:-1
so has part: feature:285125-285456:-1:exon

109571042
type: Gene
SIO_000068: ncbigene

position:285125:-1
position: 285125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285456:-1
position: 285456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285125-285456:-1:exon

LOC109571042
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109571042
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109571042
subclass of: SO_0000673
so part of: LOC109571042
location: complement(285125..285456)
location: region:285125-285456:-1
so has part: feature:285125-285456:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285125-285456:-1:exon

KLHL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: KLHL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 309523..481037
location: region:309523-481037:1
so has part: feature:309523-481037:1:exon
subclass of: SO_0000010

109571210
type: Gene
SIO_000068: ncbigene

position:309523:1
position: 309523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481037:1
position: 481037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309523-481037:1:exon

KLHL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: KLHL2
product: kelch like family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 57 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 195 samples with support for all annotated introns
transcript id: XM_019977499.1
SIO_010081: KLHL2
subclass of: SO_0000673
so part of: KLHL2
location: join(309523..309649,322869..322994,352418..352524,373224..373345,400649..400811,448079..448188,456183..456299,457502..457651,463631..463748,473171..473368,473757..473858,475133..475261,475898..476038,478153..478296,479916..481037)
location: region:309523-481037:1
so has part: feature:309523-309649:1:exon
so has part: feature:322869-322994:1:exon
so has part: feature:352418-352524:1:exon
so has part: feature:373224-373345:1:exon
so has part: feature:400649-400811:1:exon
so has part: feature:448079-448188:1:exon
so has part: feature:456183-456299:1:exon
so has part: feature:457502-457651:1:exon
so has part: feature:463631-463748:1:exon
so has part: feature:473171-473368:1:exon
so has part: feature:473757-473858:1:exon
so has part: feature:475133-475261:1:exon
so has part: feature:475898-476038:1:exon
so has part: feature:478153-478296:1:exon
so has part: feature:479916-481037:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309523-309649:1:exon

position:309649:1
position: 309649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322869-322994:1:exon

position:322869:1
position: 322869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322994:1
position: 322994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:352418-352524:1:exon

position:352418:1
position: 352418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352524:1
position: 352524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:373224-373345:1:exon

position:373224:1
position: 373224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373345:1
position: 373345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:400649-400811:1:exon

position:400649:1
position: 400649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400811:1
position: 400811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:448079-448188:1:exon

position:448079:1
position: 448079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448188:1
position: 448188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:456183-456299:1:exon

position:456183:1
position: 456183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456299:1
position: 456299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:457502-457651:1:exon

position:457502:1
position: 457502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457651:1
position: 457651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:463631-463748:1:exon

position:463631:1
position: 463631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463748:1
position: 463748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:473171-473368:1:exon

position:473171:1
position: 473171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473368:1
position: 473368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:473757-473858:1:exon

position:473757:1
position: 473757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473858:1
position: 473858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:475133-475261:1:exon

position:475133:1
position: 475133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475261:1
position: 475261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:475898-476038:1:exon

position:475898:1
position: 475898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476038:1
position: 476038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:478153-478296:1:exon

position:478153:1
position: 478153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478296:1
position: 478296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:479916-481037:1:exon

position:479916:1
position: 479916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLHL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: KLHL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 2 isoform X1
translation: METPPRPPACTNQGHQKSLDSKDDNTEKHCPVTVNPWHMKKAFKVMNELRSQNLLCDVTIVAEDMEISAHRVVLAACSPYFHAMFTGEMSESRAKRVRIKEVDGWTLRMLIDYVYTAEIQVTEENVQVLLPAAGLLQLQDVKKTCCEFLESQLHPVNCLGIRAFADMHACTDLLNKANTYAEQHFADVVLSEEFLNLGIEQVCSLISSDKLTISSEEKVFEAVIAWVNHDKDVRQEFMARLMEHVRLPLLPREYLVQRVEEEALVKNSSACKDYLIEAMKYHLLPTEQRILMKSIRTRLRTPMNLPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDGASRQCLSTVECYSATANEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPATNTWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDKPL
SIO_010081: KLHL2
subclass of: SO_0000673
so part of: KLHL2
location: join(309624..309649,322869..322994,352418..352524,373224..373345,400649..400811,448079..448188,456183..456299,457502..457651,463631..463748,473171..473368,473757..473858,475133..475261,475898..476038,478153..478296,479916..479944)
location: region:309624-479944:1
so has part: feature:309624-309649:1:exon
so has part: feature:322869-322994:1:exon
so has part: feature:352418-352524:1:exon
so has part: feature:373224-373345:1:exon
so has part: feature:400649-400811:1:exon
so has part: feature:448079-448188:1:exon
so has part: feature:456183-456299:1:exon
so has part: feature:457502-457651:1:exon
so has part: feature:463631-463748:1:exon
so has part: feature:473171-473368:1:exon
so has part: feature:473757-473858:1:exon
so has part: feature:475133-475261:1:exon
so has part: feature:475898-476038:1:exon
so has part: feature:478153-478296:1:exon
so has part: feature:479916-479944:1:exon

XP_019833058.1
type: Protein
SIO_000068: ncbiprotein

position:309624:1
position: 309624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479944:1
position: 479944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309624-309649:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322869-322994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:352418-352524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:373224-373345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:400649-400811:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:448079-448188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:456183-456299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457502-457651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:463631-463748:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:473171-473368:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:473757-473858:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:475133-475261:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:475898-476038:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:478153-478296:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:479916-479944:1:exon

KLHL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: KLHL2
product: kelch like family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 57 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019977500.1
SIO_010081: KLHL2
subclass of: SO_0000673
so part of: KLHL2
location: join(352435..352524,400649..400811,448079..448188,456183..456299,457502..457651,463631..463748,473171..473368,473757..473858,475133..475261,475898..476038,478153..478296,479916..481031)
location: region:352435-481031:1
so has part: feature:352435-352524:1:exon
so has part: feature:400649-400811:1:exon
so has part: feature:448079-448188:1:exon
so has part: feature:456183-456299:1:exon
so has part: feature:457502-457651:1:exon
so has part: feature:463631-463748:1:exon
so has part: feature:473171-473368:1:exon
so has part: feature:473757-473858:1:exon
so has part: feature:475133-475261:1:exon
so has part: feature:475898-476038:1:exon
so has part: feature:478153-478296:1:exon
so has part: feature:479916-481031:1:exon

position:352435:1
position: 352435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481031:1
position: 481031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352435-352524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:400649-400811:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448079-448188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456183-456299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:457502-457651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463631-463748:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473171-473368:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:473757-473858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:475133-475261:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:475898-476038:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:478153-478296:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479916-481031:1:exon

KLHL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: KLHL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 2 isoform X2
translation: MSRLWPKTWKFLLIEWCWLPVVLTFTPCLQVLLPAAGLLQLQDVKKTCCEFLESQLHPVNCLGIRAFADMHACTDLLNKANTYAEQHFADVVLSEEFLNLGIEQVCSLISSDKLTISSEEKVFEAVIAWVNHDKDVRQEFMARLMEHVRLPLLPREYLVQRVEEEALVKNSSACKDYLIEAMKYHLLPTEQRILMKSIRTRLRTPMNLPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDGASRQCLSTVECYSATANEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPATNTWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDKPL
SIO_010081: KLHL2
subclass of: SO_0000673
so part of: KLHL2
location: join(352435..352524,400649..400811,448079..448188,456183..456299,457502..457651,463631..463748,473171..473368,473757..473858,475133..475261,475898..476038,478153..478296,479916..479944)
location: region:352435-479944:1
so has part: feature:352435-352524:1:exon
so has part: feature:400649-400811:1:exon
so has part: feature:448079-448188:1:exon
so has part: feature:456183-456299:1:exon
so has part: feature:457502-457651:1:exon
so has part: feature:463631-463748:1:exon
so has part: feature:473171-473368:1:exon
so has part: feature:473757-473858:1:exon
so has part: feature:475133-475261:1:exon
so has part: feature:475898-476038:1:exon
so has part: feature:478153-478296:1:exon
so has part: feature:479916-479944:1:exon

XP_019833059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352435-352524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:400649-400811:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448079-448188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456183-456299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:457502-457651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463631-463748:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473171-473368:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:473757-473858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:475133-475261:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:475898-476038:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:478153-478296:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479916-479944:1:exon

MSMO1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: MSMO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(493449..510454)
location: region:493449-510454:-1
so has part: feature:493449-510454:-1:exon
subclass of: SO_0000010

109571212
type: Gene
SIO_000068: ncbigene

position:493449:-1
position: 493449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510454:-1
position: 510454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493449-510454:-1:exon

MSMO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MSMO1
product: methylsterol monooxygenase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 158 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 213 samples with support for all annotated introns
transcript id: XM_019977502.1
SIO_010081: MSMO1
subclass of: SO_0000673
so part of: MSMO1
location: complement(join(493449..494420,497135..497289,498916..499042,499967..500115,505539..505824,510354..510454))
location: region:493449-510454:-1
so has part: feature:510354-510454:-1:exon
so has part: feature:505539-505824:-1:exon
so has part: feature:499967-500115:-1:exon
so has part: feature:498916-499042:-1:exon
so has part: feature:497135-497289:-1:exon
so has part: feature:493449-494420:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510354-510454:-1:exon

position:510354:-1
position: 510354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:505539-505824:-1:exon

position:505539:-1
position: 505539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505824:-1
position: 505824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:499967-500115:-1:exon

position:499967:-1
position: 499967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500115:-1
position: 500115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:498916-499042:-1:exon

position:498916:-1
position: 498916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499042:-1
position: 499042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:497135-497289:-1:exon

position:497135:-1
position: 497135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497289:-1
position: 497289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:493449-494420:-1:exon

position:494420:-1
position: 494420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MSMO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MSMO1
product: methylsterol monooxygenase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 195 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 245 samples with support for all annotated introns
transcript id: XM_019977501.1
SIO_010081: MSMO1
subclass of: SO_0000673
so part of: MSMO1
location: complement(join(493449..494420,497135..497289,498916..499042,499967..500115,505539..505824,510282..510403))
location: region:493449-510403:-1
so has part: feature:510282-510403:-1:exon
so has part: feature:505539-505824:-1:exon
so has part: feature:499967-500115:-1:exon
so has part: feature:498916-499042:-1:exon
so has part: feature:497135-497289:-1:exon
so has part: feature:493449-494420:-1:exon

position:510403:-1
position: 510403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510282-510403:-1:exon

position:510282:-1
position: 510282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:505539-505824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:499967-500115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498916-499042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497135-497289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:493449-494420:-1:exon

MSMO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MSMO1
product: methylsterol monooxygenase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 147 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_019977503.1
SIO_010081: MSMO1
subclass of: SO_0000673
so part of: MSMO1
location: complement(join(493449..494420,497135..497289,498916..499042,499967..500115,505539..505824,510181..510243))
location: region:493449-510243:-1
so has part: feature:510181-510243:-1:exon
so has part: feature:505539-505824:-1:exon
so has part: feature:499967-500115:-1:exon
so has part: feature:498916-499042:-1:exon
so has part: feature:497135-497289:-1:exon
so has part: feature:493449-494420:-1:exon

position:510243:-1
position: 510243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510181-510243:-1:exon

position:510181:-1
position: 510181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:505539-505824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:499967-500115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498916-499042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497135-497289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:493449-494420:-1:exon

MSMO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MSMO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylsterol monooxygenase 1
translation: MATNESISVFSSASLAVEYVDSLLPDNPLQEPFKNAWNYMLNNYTKFQIATWGSLIVHEVLYFLFCLPGFLFQFIPYMKKYKIQKDKPETWENQWKCFKVLLFNHFCIQLPLICGTYYFTEYFSIPYDWETMPRWYMLLARCFGCAVIEDTWHYFLHRLLHHKRIYKYIHKVHHEFQAPFGMEAEYAHPLETIILGTGFFIGIMLLCDHVILLWAWVTVRLIETIDVHSGYDIPLNPLNLIPFYAGSRHHDFHHMNFIGNYASTFTWWDRIFGTDSQFNAYNEKMKKVEKKTE
SIO_010081: MSMO1
subclass of: SO_0000673
so part of: MSMO1
location: complement(join(494225..494420,497135..497289,498916..499042,499967..500115,505539..505793))
location: region:494225-505793:-1
so has part: feature:505539-505793:-1:exon
so has part: feature:499967-500115:-1:exon
so has part: feature:498916-499042:-1:exon
so has part: feature:497135-497289:-1:exon
so has part: feature:494225-494420:-1:exon

XP_019833060.1
type: Protein
SIO_000068: ncbiprotein

position:494225:-1
position: 494225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505793:-1
position: 505793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505539-505793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499967-500115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:498916-499042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:497135-497289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494225-494420:-1:exon

MSMO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MSMO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylsterol monooxygenase 1
translation: MATNESISVFSSASLAVEYVDSLLPDNPLQEPFKNAWNYMLNNYTKFQIATWGSLIVHEVLYFLFCLPGFLFQFIPYMKKYKIQKDKPETWENQWKCFKVLLFNHFCIQLPLICGTYYFTEYFSIPYDWETMPRWYMLLARCFGCAVIEDTWHYFLHRLLHHKRIYKYIHKVHHEFQAPFGMEAEYAHPLETIILGTGFFIGIMLLCDHVILLWAWVTVRLIETIDVHSGYDIPLNPLNLIPFYAGSRHHDFHHMNFIGNYASTFTWWDRIFGTDSQFNAYNEKMKKVEKKTE
SIO_010081: MSMO1
subclass of: SO_0000673
so part of: MSMO1
location: complement(join(494225..494420,497135..497289,498916..499042,499967..500115,505539..505793))
location: region:494225-505793:-1
so has part: feature:505539-505793:-1:exon
so has part: feature:499967-500115:-1:exon
so has part: feature:498916-499042:-1:exon
so has part: feature:497135-497289:-1:exon
so has part: feature:494225-494420:-1:exon

XP_019833061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505539-505793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499967-500115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:498916-499042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:497135-497289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494225-494420:-1:exon

MSMO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MSMO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylsterol monooxygenase 1
translation: MATNESISVFSSASLAVEYVDSLLPDNPLQEPFKNAWNYMLNNYTKFQIATWGSLIVHEVLYFLFCLPGFLFQFIPYMKKYKIQKDKPETWENQWKCFKVLLFNHFCIQLPLICGTYYFTEYFSIPYDWETMPRWYMLLARCFGCAVIEDTWHYFLHRLLHHKRIYKYIHKVHHEFQAPFGMEAEYAHPLETIILGTGFFIGIMLLCDHVILLWAWVTVRLIETIDVHSGYDIPLNPLNLIPFYAGSRHHDFHHMNFIGNYASTFTWWDRIFGTDSQFNAYNEKMKKVEKKTE
SIO_010081: MSMO1
subclass of: SO_0000673
so part of: MSMO1
location: complement(join(494225..494420,497135..497289,498916..499042,499967..500115,505539..505793))
location: region:494225-505793:-1
so has part: feature:505539-505793:-1:exon
so has part: feature:499967-500115:-1:exon
so has part: feature:498916-499042:-1:exon
so has part: feature:497135-497289:-1:exon
so has part: feature:494225-494420:-1:exon

XP_019833062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505539-505793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499967-500115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:498916-499042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:497135-497289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494225-494420:-1:exon

CPE
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: CPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 557408..706638
location: region:557408-706638:1
so has part: feature:557408-706638:1:exon
subclass of: SO_0000010

109571486
type: Gene
SIO_000068: ncbigene

position:557408:1
position: 557408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706638:1
position: 706638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557408-706638:1:exon

CPE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CPE
product: carboxypeptidase E, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 66 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 152 samples with support for all annotated introns
transcript id: XM_019978001.1
SIO_010081: CPE
subclass of: SO_0000673
so part of: CPE
location: join(557408..557899,654774..654970,656629..656796,667549..667666,669212..669394,679900..680039,688817..688916,701059..701177,705234..706638)
location: region:557408-706638:1
so has part: feature:557408-557899:1:exon
so has part: feature:654774-654970:1:exon
so has part: feature:656629-656796:1:exon
so has part: feature:667549-667666:1:exon
so has part: feature:669212-669394:1:exon
so has part: feature:679900-680039:1:exon
so has part: feature:688817-688916:1:exon
so has part: feature:701059-701177:1:exon
so has part: feature:705234-706638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:557408-557899:1:exon

position:557899:1
position: 557899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:654774-654970:1:exon

position:654774:1
position: 654774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654970:1
position: 654970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:656629-656796:1:exon

position:656629:1
position: 656629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656796:1
position: 656796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:667549-667666:1:exon

position:667549:1
position: 667549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667666:1
position: 667666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:669212-669394:1:exon

position:669212:1
position: 669212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669394:1
position: 669394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:679900-680039:1:exon

position:679900:1
position: 679900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680039:1
position: 680039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:688817-688916:1:exon

position:688817:1
position: 688817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688916:1
position: 688916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:701059-701177:1:exon

position:701059:1
position: 701059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701177:1
position: 701177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:705234-706638:1:exon

position:705234:1
position: 705234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: CPE
product: carboxypeptidase E, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_019978002.1
SIO_010081: CPE
subclass of: SO_0000673
so part of: CPE
location: join(557408..557899,654774..654970,656629..656796,667549..667666,669212..669394,679900..680039,701059..701177,705234..706638)
location: region:557408-706638:1
so has part: feature:557408-557899:1:exon
so has part: feature:654774-654970:1:exon
so has part: feature:656629-656796:1:exon
so has part: feature:667549-667666:1:exon
so has part: feature:669212-669394:1:exon
so has part: feature:679900-680039:1:exon
so has part: feature:701059-701177:1:exon
so has part: feature:705234-706638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:557408-557899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654774-654970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656629-656796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667549-667666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669212-669394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:679900-680039:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:701059-701177:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:705234-706638:1:exon

CPE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase E isoform X1
translation: MARRGGCALLVLCGSLAACAWLLGAEARGPGGPVAGARRRXRPQEDGISFEYHRYPELREALVSVWLQCAAVSRIYTVGRSFEGRELLVLELSDNPGVHEPGEPEFKYIGNMHGNEAVGRELLIFLAQYLCNEYQKGNETIVQLIHNTRIHIMPSLNPDGFEKAASQLGELKDWFVGRSNAQGIDLNRNFPDLDRIVYINEKEGGPNNHLLKNLKKIVDQNTKLAPETKAVIHWIMDIPFVLSANLHGGDLVANYPYDETRSGSAHEYSSCPDDDIFQSLARAYSSFNPPMSDPDRPPCRKNDDDSSFVEGTTNGAAWYSVPGGMQDFNYLSSNCFEITVELSCEKFPPEETLKNYWEDNKNSLISYIQQIHRGVKGFVRDLQGNPIANATLSVEGIDHDVTSAKDGDYWRLLVPGNYKLTASAPGYLAIAKKVAVPYSPAVRVDFELESFSERKEEEKEELMEWWKMMSETLNF
SIO_010081: CPE
subclass of: SO_0000673
so part of: CPE
location: join(557596..557899,654774..654970,656629..656796,667549..667666,669212..669394,679900..680039,688817..688916,701059..701177,705234..705332)
location: region:557596-705332:1
so has part: feature:557596-557899:1:exon
so has part: feature:654774-654970:1:exon
so has part: feature:656629-656796:1:exon
so has part: feature:667549-667666:1:exon
so has part: feature:669212-669394:1:exon
so has part: feature:679900-680039:1:exon
so has part: feature:688817-688916:1:exon
so has part: feature:701059-701177:1:exon
so has part: feature:705234-705332:1:exon

XP_019833560.1
type: Protein
SIO_000068: ncbiprotein

position:557596:1
position: 557596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705332:1
position: 705332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557596-557899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654774-654970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656629-656796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667549-667666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669212-669394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:679900-680039:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:688817-688916:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:701059-701177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:705234-705332:1:exon

CPE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: CPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase E isoform X2
translation: MARRGGCALLVLCGSLAACAWLLGAEARGPGGPVAGARRRXRPQEDGISFEYHRYPELREALVSVWLQCAAVSRIYTVGRSFEGRELLVLELSDNPGVHEPGEPEFKYIGNMHGNEAVGRELLIFLAQYLCNEYQKGNETIVQLIHNTRIHIMPSLNPDGFEKAASQLGELKDWFVGRSNAQGIDLNRNFPDLDRIVYINEKEGGPNNHLLKNLKKIVDQNTKLAPETKAVIHWIMDIPFVLSANLHGGDLVANYPYDETRSGSAHEYSSCPDDDIFQSLARAYSSFNPPMSDPDRPPCRKNDDDSSFVEGTTNGAAWYSVPGGMQDFNYLSSNCFEITVELSCEKFPPEETLKNYWEDNKNSLISYIQQQRMVITGDCSSLETINLQPQHRAIWQ
SIO_010081: CPE
subclass of: SO_0000673
so part of: CPE
location: join(557596..557899,654774..654970,656629..656796,667549..667666,669212..669394,679900..680039,701059..701139)
location: region:557596-701139:1
so has part: feature:557596-557899:1:exon
so has part: feature:654774-654970:1:exon
so has part: feature:656629-656796:1:exon
so has part: feature:667549-667666:1:exon
so has part: feature:669212-669394:1:exon
so has part: feature:679900-680039:1:exon
so has part: feature:701059-701139:1:exon

XP_019833561.1
type: Protein
SIO_000068: ncbiprotein

position:701139:1
position: 701139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557596-557899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654774-654970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656629-656796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667549-667666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669212-669394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:679900-680039:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:701059-701139:1:exon

LOC109570998
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109570998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 758882..761219
location: region:758882-761219:1
so has part: feature:758882-761219:1:exon

109570998
type: Gene
SIO_000068: ncbigene

position:758882:1
position: 758882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761219:1
position: 761219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758882-761219:1:exon

LOC109570998
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109570998
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109570998
subclass of: SO_0000673
so part of: LOC109570998
location: 758882..760403
location: region:758882-760403:1
so has part: feature:758882-760403:1:exon

position:760403:1
position: 760403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758882-760403:1:exon

LOC109570998
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109570998
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109570998
subclass of: SO_0000673
so part of: LOC109570998
location: 760446..761219
location: region:760446-761219:1
so has part: feature:760446-761219:1:exon

position:760446:1
position: 760446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760446-761219:1:exon

LOC109571030
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1243833..1261685
location: region:1243833-1261685:1
so has part: feature:1243833-1261685:1:exon
subclass of: SO_0000011

109571030
type: Gene
SIO_000068: ncbigene

position:1243833:1
position: 1243833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261685:1
position: 1261685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1243833-1261685:1:exon

LOC109571030
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109571030
product: uncharacterized LOC109571030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XR_002182586.1
SIO_010081: LOC109571030
subclass of: SO_0000673
so part of: LOC109571030
location: join(1243833..1243893,1261632..1261685)
location: region:1243833-1261685:1
so has part: feature:1243833-1243893:1:exon
so has part: feature:1261632-1261685:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1243833-1243893:1:exon

position:1243893:1
position: 1243893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1261632-1261685:1:exon

position:1261632:1
position: 1261632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1751537..1925226
location: region:1751537-1925226:1
so has part: feature:1751537-1925226:1:exon
subclass of: SO_0000010

109571525
type: Gene
SIO_000068: ncbigene

position:1751537:1
position: 1751537
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1925226:1
position: 1925226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1751537-1925226:1:exon

TLL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TLL1
product: tolloid like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019978057.1
SIO_010081: TLL1
subclass of: SO_0000673
so part of: TLL1
location: join(<1751537..1751642,1756073..1756153,1757657..1757809,1758326..1758443,1771922..1772100,1779055..1779160,1784206..1784330,1795996..1796111,1840999..1841101,1844847..1844963,1846157..1846302,1857570..1857765,1859639..1859764,1861726..1861886,1864948..1865128,1872818..1872943,1875760..1875887,1907467..1907680,1921879..1922129,1923286..1925226)
location: region:1751537-1925226:1
so has part: feature:1751537-1751642:1:exon
so has part: feature:1756073-1756153:1:exon
so has part: feature:1757657-1757809:1:exon
so has part: feature:1758326-1758443:1:exon
so has part: feature:1771922-1772100:1:exon
so has part: feature:1779055-1779160:1:exon
so has part: feature:1784206-1784330:1:exon
so has part: feature:1795996-1796111:1:exon
so has part: feature:1840999-1841101:1:exon
so has part: feature:1844847-1844963:1:exon
so has part: feature:1846157-1846302:1:exon
so has part: feature:1857570-1857765:1:exon
so has part: feature:1859639-1859764:1:exon
so has part: feature:1861726-1861886:1:exon
so has part: feature:1864948-1865128:1:exon
so has part: feature:1872818-1872943:1:exon
so has part: feature:1875760-1875887:1:exon
so has part: feature:1907467-1907680:1:exon
so has part: feature:1921879-1922129:1:exon
so has part: feature:1923286-1925226:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1751537-1751642:1:exon

position:1751642:1
position: 1751642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1756073-1756153:1:exon

position:1756073:1
position: 1756073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1756153:1
position: 1756153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1757657-1757809:1:exon

position:1757657:1
position: 1757657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1757809:1
position: 1757809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1758326-1758443:1:exon

position:1758326:1
position: 1758326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1758443:1
position: 1758443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1771922-1772100:1:exon

position:1771922:1
position: 1771922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1772100:1
position: 1772100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1779055-1779160:1:exon

position:1779055:1
position: 1779055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1779160:1
position: 1779160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1784206-1784330:1:exon

position:1784206:1
position: 1784206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1784330:1
position: 1784330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1795996-1796111:1:exon

position:1795996:1
position: 1795996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1796111:1
position: 1796111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1840999-1841101:1:exon

position:1840999:1
position: 1840999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1841101:1
position: 1841101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1844847-1844963:1:exon

position:1844847:1
position: 1844847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1844963:1
position: 1844963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1846157-1846302:1:exon

position:1846157:1
position: 1846157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1846302:1
position: 1846302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1857570-1857765:1:exon

position:1857570:1
position: 1857570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1857765:1
position: 1857765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1859639-1859764:1:exon

position:1859639:1
position: 1859639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1859764:1
position: 1859764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1861726-1861886:1:exon

position:1861726:1
position: 1861726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1861886:1
position: 1861886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1864948-1865128:1:exon

position:1864948:1
position: 1864948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1865128:1
position: 1865128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1872818-1872943:1:exon

position:1872818:1
position: 1872818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1872943:1
position: 1872943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1875760-1875887:1:exon

position:1875760:1
position: 1875760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1875887:1
position: 1875887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1907467-1907680:1:exon

position:1907467:1
position: 1907467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1907680:1
position: 1907680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1921879-1922129:1:exon

position:1921879:1
position: 1921879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1922129:1
position: 1922129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1923286-1925226:1:exon

position:1923286:1
position: 1923286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tolloid-like protein 1
translation: FWGDIALDDEDLNIFQIDRTIDLTQNPFGKFGHITGGFGDHGMSKKRGALYQLIDRIRRIGSGLEQNNTVKEKLPLKFSGQSEKNRVPRAATSRTERVWPGGVIPYVIGGNFTGSQRAMFKQAMRHWEKHTCVTFIERGDEESYIVFTYRPCGCCSYVGRRGNGPQAISIGKNCDKFGIVVHELGHVIGFWHEHTRPDRDNHVTIIRENIQPGQEYNFLKMEPAEVNSLGESYDFDSIMHYARNTFSRGMFLDTILPSRDDNGIRPAIGQRTRLSKGDIAQARKLYRCPACGETLQESNGNLSSPGFPNGYPSYTHCIWRVSVTPGEKIVLNFTTMDLYKSSLCWYDYIEVRDGYWRKSPLLGRFCGDKLPEVLTSTESRMWIEFRSSSNWVGKGFAAXYEAICGGEIHKNEGQIQSPNYPDDYRPMKECVWKIAVSEDCYVGLIFQAFEIERHDNCAYDYLEVRDGTNESSPLIGRFCGYDKPEDIRSTSNTLWMKFVSDGTVNKAGFAANFFKEEDECAKPDRGGCEQHCLNTLGSYQCACEPGYELGPDRRTCEAACGGLLTKLNGTITTPGWPKEYPPNKHCIWQVVAPTQYRISVKFEFFELEGNEVCKYDYVEIWSGLSSESKLHGKYCGAEVPEVITSHFNNMRIEFKSDNTVSKKGFKAHFFSDKDECSKDNGGCQHECVNTMGSYLCQCRNGFVLHENKHDCKEAECEQKIHSPSGFITSPNWPDKYPSRKECTWEISATPGHRVKLAFTEFEIEQHQECAYDHLEVFDGETEKSPVLGRLCGNKIPEPLVATGNNMFVRFVSDASVQRKGFQAAHSTECGGRLKVESKPRDLYSHAQFGDNNYPGQVDCEWLLVSERGSRLELSFQIFEVEEEADCGYDYVELFDGLDSTAVGLGRFCGSGPPEEIYSIGDTVLIHFHTDDTISKKGFHIRYKSIRYPDSTHTKK
SIO_010081: TLL1
subclass of: SO_0000673
so part of: TLL1
location: join(<1751537..1751642,1756073..1756153,1757657..1757809,1758326..1758443,1771922..1772100,1779055..1779160,1784206..1784330,1795996..1796111,1840999..1841101,1844847..1844963,1846157..1846302,1857570..1857765,1859639..1859764,1861726..1861886,1864948..1865128,1872818..1872943,1875760..1875887,1907467..1907680,1921879..1922129,1923286..1923420)
location: region:1751537-1923420:1
so has part: feature:1751537-1751642:1:exon
so has part: feature:1756073-1756153:1:exon
so has part: feature:1757657-1757809:1:exon
so has part: feature:1758326-1758443:1:exon
so has part: feature:1771922-1772100:1:exon
so has part: feature:1779055-1779160:1:exon
so has part: feature:1784206-1784330:1:exon
so has part: feature:1795996-1796111:1:exon
so has part: feature:1840999-1841101:1:exon
so has part: feature:1844847-1844963:1:exon
so has part: feature:1846157-1846302:1:exon
so has part: feature:1857570-1857765:1:exon
so has part: feature:1859639-1859764:1:exon
so has part: feature:1861726-1861886:1:exon
so has part: feature:1864948-1865128:1:exon
so has part: feature:1872818-1872943:1:exon
so has part: feature:1875760-1875887:1:exon
so has part: feature:1907467-1907680:1:exon
so has part: feature:1921879-1922129:1:exon
so has part: feature:1923286-1923420:1:exon

XP_019833616.1
type: Protein
SIO_000068: ncbiprotein

position:1923420:1
position: 1923420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1751537-1751642:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1756073-1756153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1757657-1757809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1758326-1758443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1771922-1772100:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1779055-1779160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1784206-1784330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1795996-1796111:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1840999-1841101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1844847-1844963:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1846157-1846302:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1857570-1857765:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1859639-1859764:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1861726-1861886:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1864948-1865128:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1872818-1872943:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1875760-1875887:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1907467-1907680:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1921879-1922129:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1923286-1923420:1:exon

MAP9
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: MAP9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2009277..2055299
location: region:2009277-2055299:1
so has part: feature:2009277-2055299:1:exon
subclass of: SO_0000010

109571542
type: Gene
SIO_000068: ncbigene

position:2009277:1
position: 2009277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2055299:1
position: 2055299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2009277-2055299:1:exon

MAP9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MAP9
product: microtubule associated protein 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019978080.1
SIO_010081: MAP9
subclass of: SO_0000673
so part of: MAP9
location: join(2009277..2009498,2010602..2010747,2011470..2011554,2012651..2012959,2020370..2020599,2026867..2026960,2028635..2028873,2030636..2030706,2032173..2032341,2033330..2033419,2036860..2037021,2037141..2037286,2037463..2037595,2055100..2055299)
location: region:2009277-2055299:1
so has part: feature:2009277-2009498:1:exon
so has part: feature:2010602-2010747:1:exon
so has part: feature:2011470-2011554:1:exon
so has part: feature:2012651-2012959:1:exon
so has part: feature:2020370-2020599:1:exon
so has part: feature:2026867-2026960:1:exon
so has part: feature:2028635-2028873:1:exon
so has part: feature:2030636-2030706:1:exon
so has part: feature:2032173-2032341:1:exon
so has part: feature:2033330-2033419:1:exon
so has part: feature:2036860-2037021:1:exon
so has part: feature:2037141-2037286:1:exon
so has part: feature:2037463-2037595:1:exon
so has part: feature:2055100-2055299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2009277-2009498:1:exon

position:2009498:1
position: 2009498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2010602-2010747:1:exon

position:2010602:1
position: 2010602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2010747:1
position: 2010747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2011470-2011554:1:exon

position:2011470:1
position: 2011470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2011554:1
position: 2011554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2012651-2012959:1:exon

position:2012651:1
position: 2012651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2012959:1
position: 2012959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2020370-2020599:1:exon

position:2020370:1
position: 2020370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2020599:1
position: 2020599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2026867-2026960:1:exon

position:2026867:1
position: 2026867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2026960:1
position: 2026960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2028635-2028873:1:exon

position:2028635:1
position: 2028635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2028873:1
position: 2028873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2030636-2030706:1:exon

position:2030636:1
position: 2030636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2030706:1
position: 2030706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2032173-2032341:1:exon

position:2032173:1
position: 2032173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2032341:1
position: 2032341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2033330-2033419:1:exon

position:2033330:1
position: 2033330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2033419:1
position: 2033419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2036860-2037021:1:exon

position:2036860:1
position: 2036860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2037021:1
position: 2037021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2037141-2037286:1:exon

position:2037141:1
position: 2037141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2037286:1
position: 2037286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2037463-2037595:1:exon

position:2037463:1
position: 2037463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2037595:1
position: 2037595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2055100-2055299:1:exon

position:2055100:1
position: 2055100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAP9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MAP9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein 9
translation: MSDEVFSTTLAYTKSPKVTKRTTFQDELIKAITARSARQRSSEYSDDFDSDEIGDFSDTSVDENSVNKKMNNFHISDDEENNSPKLSFLKTKKSSNDVRKHEPVVSIKNDDIAFDNGEGMVVNPLPESQNKQQEVEKEKIKMETKPRILPIKSTSSENNSSLEADSQFKPSPRPRSMLKKHSHGEKKDSLGNNKETVPHEDLEGHSTPSFLPRPNDRQPEAERNAFSENLDPEDPWLTSIPSSSVKENLKDSFSLGSEEKASITDQSEECTESHNSLKSTENEKNSFLIDFVTTALEKPQESQVTVGDVEEEKEKAHLIMKDDLTAEDTPLLQLQSILCTESSKKAIQDRNMKNKKSTTNRASSASGRLMTSEFLKKPSSLRRIPSTASASHYLGTLRVLDQKPSQKQNTEPDRADNLRATVYQEWLEKKNIYLHEMHRIKRIESENLRIQNEQKRAAKREEALASFEAWKAMKEKEAKKIAAKKRLEEKNKKKTEEENAMRKGEALQAFEKWKAKKMEYLKEKNKKEKEYERAKKQKEEETVAEKRKDNLTAVEKWNEKKEVFFKEKEKVKIHEKRKEEQKRAEKKEKDKQALEEYEKWLEKKERKERIERKQKKHHPFLENETLPPWSPPSRTVFSKVF
SIO_010081: MAP9
subclass of: SO_0000673
so part of: MAP9
location: join(2010673..2010747,2011470..2011554,2012651..2012959,2020370..2020599,2026867..2026960,2028635..2028873,2030636..2030706,2032173..2032341,2033330..2033419,2036860..2037021,2037141..2037286,2037463..2037595,2055100..2055222)
location: region:2010673-2055222:1
so has part: feature:2010673-2010747:1:exon
so has part: feature:2011470-2011554:1:exon
so has part: feature:2012651-2012959:1:exon
so has part: feature:2020370-2020599:1:exon
so has part: feature:2026867-2026960:1:exon
so has part: feature:2028635-2028873:1:exon
so has part: feature:2030636-2030706:1:exon
so has part: feature:2032173-2032341:1:exon
so has part: feature:2033330-2033419:1:exon
so has part: feature:2036860-2037021:1:exon
so has part: feature:2037141-2037286:1:exon
so has part: feature:2037463-2037595:1:exon
so has part: feature:2055100-2055222:1:exon

XP_019833639.1
type: Protein
SIO_000068: ncbiprotein

position:2010673:1
position: 2010673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2055222:1
position: 2055222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2010673-2010747:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2011470-2011554:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2012651-2012959:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2020370-2020599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2026867-2026960:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2028635-2028873:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2030636-2030706:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2032173-2032341:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2033330-2033419:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2036860-2037021:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2037141-2037286:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2037463-2037595:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2055100-2055222:1:exon

NPY2R
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: NPY2R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2164770..2169220)
location: region:2164770-2169220:-1
so has part: feature:2164770-2169220:-1:exon
subclass of: SO_0000010

109571036
type: Gene
SIO_000068: ncbigene

position:2164770:-1
position: 2164770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2169220:-1
position: 2169220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2164770-2169220:-1:exon

NPY2R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: NPY2R
product: neuropeptide Y receptor Y2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 7 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019977156.1
SIO_010081: NPY2R
subclass of: SO_0000673
so part of: NPY2R
location: complement(join(2164770..2166361,2169095..2169220))
location: region:2164770-2169220:-1
so has part: feature:2169095-2169220:-1:exon
so has part: feature:2164770-2166361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2169095-2169220:-1:exon

position:2169095:-1
position: 2169095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2164770-2166361:-1:exon

position:2166361:-1
position: 2166361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NPY2R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: NPY2R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropeptide Y receptor type 2
translation: MKMGPLGAEADENQTVEEMKVDQFGPGHTTLPGELAPDSEPELIDSTKLIEVQVVLILAYCSIILLGVIGNSLVIHVVIKFKSMRTVTNFFIANLAVADLLVNTLCLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLESKISKQISFLIIGLAWGVSALLASPLAIFREYSLIEIIPDFEIVACTEKWPGEEKGIYGTVYSLSSLLILYVLPLGIISFSYTRIWSKLKNHVSPGAAHDHYHQRRQKTTKMLVCVVVVFAVSWLPLHAFQLAVDIDSHVLDLKEYKLIFTVFHIIAMCSTFANPLLYGWMNSNYRKAFLSAFRCEQRLDAIHSEVSVTFKAKKHLQVTKNNGPNDSFTETTNV
SIO_010081: NPY2R
subclass of: SO_0000673
so part of: NPY2R
location: complement(2165191..2166345)
location: region:2165191-2166345:-1
so has part: feature:2165191-2166345:-1:exon

XP_019832715.1
type: Protein
SIO_000068: ncbiprotein

position:2165191:-1
position: 2165191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2166345:-1
position: 2166345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2165191-2166345:-1:exon

RBM46
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: RBM46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2766653..2824461)
location: region:2766653-2824461:-1
so has part: feature:2766653-2824461:-1:exon
subclass of: SO_0000010

109570835
type: Gene
SIO_000068: ncbigene

position:2766653:-1
position: 2766653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2824461:-1
position: 2824461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2766653-2824461:-1:exon

RBM46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RBM46
product: RNA binding motif protein 46
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 11 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019976991.1
SIO_010081: RBM46
subclass of: SO_0000673
so part of: RBM46
location: complement(join(2766653..2767589,2780193..2780252,2808560..2809342,2809829..2810296,2811185..2811346,2824341..2824461))
location: region:2766653-2824461:-1
so has part: feature:2824341-2824461:-1:exon
so has part: feature:2811185-2811346:-1:exon
so has part: feature:2809829-2810296:-1:exon
so has part: feature:2808560-2809342:-1:exon
so has part: feature:2780193-2780252:-1:exon
so has part: feature:2766653-2767589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2824341-2824461:-1:exon

position:2824341:-1
position: 2824341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2811185-2811346:-1:exon

position:2811185:-1
position: 2811185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2811346:-1
position: 2811346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2809829-2810296:-1:exon

position:2809829:-1
position: 2809829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2810296:-1
position: 2810296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2808560-2809342:-1:exon

position:2808560:-1
position: 2808560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2809342:-1
position: 2809342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2780193-2780252:-1:exon

position:2780193:-1
position: 2780193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2780252:-1
position: 2780252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2766653-2767589:-1:exon

position:2767589:-1
position: 2767589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBM46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RBM46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable RNA-binding protein 46
translation: MSEETIDGTNGCSKVRTGTQNEAALLALMEKTGYNMVQENGQRKFGGPPPGWEGPPPPRGCEVFVGKIPRDMYEDELVPVFERAGKIYEFRLMMEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIGAIPKEKKKEEILDEMKKVTEGVVDVIVYPSATDKTKNRGFAFVEYESHRAAAMARRKLIPGTFQLWGHTIQVDWADPEKEVDEETMQRVKVLYVRNLMISTTEETIKAEFNKFKPGSVERVKKLRDYAFVHFFNREDAVAAMSVMNGKCIDGASIEVTLAKPVNKENTWRQHLNGQISPNSENLIVFANKEESHPKILGKPPALPARLNGQHSPSPPEIERCTYPFFPGTKLTPISMYSLKSNHFNSAVMHLDYYCNKNNWAPPEYYLYSTTSQDGKVLLVYKIIIPAIANGSQSYFMPDKLCTTLEDAKELAAQFTLLHLDREHSLFSLDLCRRIWRK
SIO_010081: RBM46
subclass of: SO_0000673
so part of: RBM46
location: complement(join(2780197..2780252,2808560..2809342,2809829..2810296,2811185..2811335))
location: region:2780197-2811335:-1
so has part: feature:2811185-2811335:-1:exon
so has part: feature:2809829-2810296:-1:exon
so has part: feature:2808560-2809342:-1:exon
so has part: feature:2780197-2780252:-1:exon

XP_019832550.1
type: Protein
SIO_000068: ncbiprotein

position:2780197:-1
position: 2780197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2811335:-1
position: 2811335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2811185-2811335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2809829-2810296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2808560-2809342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2780197-2780252:-1:exon

LRAT
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LRAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2892197..2901083)
location: region:2892197-2901083:-1
so has part: feature:2892197-2901083:-1:exon
subclass of: SO_0000010

109571479
type: Gene
SIO_000068: ncbigene

position:2892197:-1
position: 2892197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2901083:-1
position: 2901083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2892197-2901083:-1:exon

LRAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LRAT
product: lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 27 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_019977982.1
SIO_010081: LRAT
subclass of: SO_0000673
so part of: LRAT
location: complement(join(2892197..2895962,2900197..2901073))
location: region:2892197-2901073:-1
so has part: feature:2900197-2901073:-1:exon
so has part: feature:2892197-2895962:-1:exon

position:2901073:-1
position: 2901073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2900197-2901073:-1:exon

position:2900197:-1
position: 2900197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2892197-2895962:-1:exon

position:2895962:-1
position: 2895962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LRAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lecithin retinol acyltransferase isoform X1
translation: MKNPMLEAVSLVLEKLLFISYFKFFSSGAPGEDKAGNTLYEISSFLRGDVLEVPRTHLTHYGIYLGDNRVAHMMPDILLALTDDKGLTQKVVSNKRLILGVIGRVASIRVDTVEDFAYGAEILVNHLDRSLKKKALLNEEVAQRAEKLLGITPYSLLWNNCEHFVTYCRFGTAISPQADKFCENVKIIIRDQRSVLASAVLGLASIFCLGLTSYTTLPAIFIPFFLWMAG
SIO_010081: LRAT
subclass of: SO_0000673
so part of: LRAT
location: complement(join(2895810..2895962,2900197..2900736))
location: region:2895810-2900736:-1
so has part: feature:2900197-2900736:-1:exon
so has part: feature:2895810-2895962:-1:exon

XP_019833541.1
type: Protein
SIO_000068: ncbiprotein

position:2895810:-1
position: 2895810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2900736:-1
position: 2900736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2900197-2900736:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2895810-2895962:-1:exon

LRAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LRAT
product: lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019977984.1
SIO_010081: LRAT
subclass of: SO_0000673
so part of: LRAT
location: complement(join(2899829..2900029,2900197..2901083))
location: region:2899829-2901083:-1
so has part: feature:2900197-2901083:-1:exon
so has part: feature:2899829-2900029:-1:exon

position:2899829:-1
position: 2899829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2900197-2901083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2899829-2900029:-1:exon

position:2900029:-1
position: 2900029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LRAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lecithin retinol acyltransferase isoform X2
translation: MKNPMLEAVSLVLEKLLFISYFKFFSSGAPGEDKAGNTLYEISSFLRGDVLEVPRTHLTHYGIYLGDNRVAHMMPDILLALTDDKGLTQKVVSNKRLILGVIGRVASIRVDTVEDFAYGAEILVNHLDRSLKKKALLNEEVAQRAEKLLGITPYSLLWNNCEHFVTYCRFGTAISPQADKDISKCTAQECGNAVPLPATPESCPVIAAEVIRVSTQRS
SIO_010081: LRAT
subclass of: SO_0000673
so part of: LRAT
location: complement(join(2899913..2900029,2900197..2900736))
location: region:2899913-2900736:-1
so has part: feature:2900197-2900736:-1:exon
so has part: feature:2899913-2900029:-1:exon

XP_019833543.1
type: Protein
SIO_000068: ncbiprotein

position:2899913:-1
position: 2899913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2900197-2900736:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2899913-2900029:-1:exon

LOC109571495
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571495
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2911730..3050509)
location: region:2911730-3050509:-1
so has part: feature:2911730-3050509:-1:exon
subclass of: SO_0000011

109571495
type: Gene
SIO_000068: ncbigene

position:2911730:-1
position: 2911730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3050509:-1
position: 3050509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2911730-3050509:-1:exon

LOC109571495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109571495
product: uncharacterized LOC109571495, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_002182674.1
SIO_010081: LOC109571495
subclass of: SO_0000673
so part of: LOC109571495
location: complement(join(2911730..2912157,2914256..2914345,3037619..3037687,3046182..3046232,3050389..3050509))
location: region:2911730-3050509:-1
so has part: feature:3050389-3050509:-1:exon
so has part: feature:3046182-3046232:-1:exon
so has part: feature:3037619-3037687:-1:exon
so has part: feature:2914256-2914345:-1:exon
so has part: feature:2911730-2912157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3050389-3050509:-1:exon

position:3050389:-1
position: 3050389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3046182-3046232:-1:exon

position:3046182:-1
position: 3046182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3046232:-1
position: 3046232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3037619-3037687:-1:exon

position:3037619:-1
position: 3037619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3037687:-1
position: 3037687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2914256-2914345:-1:exon

position:2914256:-1
position: 2914256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2914345:-1
position: 2914345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2911730-2912157:-1:exon

position:2912157:-1
position: 2912157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109571495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109571495
product: uncharacterized LOC109571495, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002182675.1
SIO_010081: LOC109571495
subclass of: SO_0000673
so part of: LOC109571495
location: complement(join(2911730..2912157,2914256..2914345,3023235..3023295,3037619..3037687,3046182..3046232,3050389..3050509))
location: region:2911730-3050509:-1
so has part: feature:3050389-3050509:-1:exon
so has part: feature:3046182-3046232:-1:exon
so has part: feature:3037619-3037687:-1:exon
so has part: feature:3023235-3023295:-1:exon
so has part: feature:2914256-2914345:-1:exon
so has part: feature:2911730-2912157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3050389-3050509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3046182-3046232:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3037619-3037687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3023235-3023295:-1:exon

position:3023235:-1
position: 3023235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3023295:-1
position: 3023295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2914256-2914345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2911730-2912157:-1:exon

FGG
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: FGG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3066880..3074956
location: region:3066880-3074956:1
so has part: feature:3066880-3074956:1:exon
subclass of: SO_0000010

109571094
type: Gene
SIO_000068: ncbigene

position:3066880:1
position: 3066880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3074956:1
position: 3074956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3066880-3074956:1:exon

FGG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FGG
product: fibrinogen gamma chain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1238 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_019977300.1
SIO_010081: FGG
subclass of: SO_0000673
so part of: FGG
location: join(3066880..3067130,3067232..3067276,3067458..3067641,3067753..3067846,3069332..3069462,3069759..3069892,3070809..3070993,3072441..3072718,3074043..3074956)
location: region:3066880-3074956:1
so has part: feature:3066880-3067130:1:exon
so has part: feature:3067232-3067276:1:exon
so has part: feature:3067458-3067641:1:exon
so has part: feature:3067753-3067846:1:exon
so has part: feature:3069332-3069462:1:exon
so has part: feature:3069759-3069892:1:exon
so has part: feature:3070809-3070993:1:exon
so has part: feature:3072441-3072718:1:exon
so has part: feature:3074043-3074956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3066880-3067130:1:exon

position:3067130:1
position: 3067130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3067232-3067276:1:exon

position:3067232:1
position: 3067232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3067276:1
position: 3067276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3067458-3067641:1:exon

position:3067458:1
position: 3067458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3067641:1
position: 3067641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3067753-3067846:1:exon

position:3067753:1
position: 3067753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3067846:1
position: 3067846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3069332-3069462:1:exon

position:3069332:1
position: 3069332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3069462:1
position: 3069462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3069759-3069892:1:exon

position:3069759:1
position: 3069759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3069892:1
position: 3069892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3070809-3070993:1:exon

position:3070809:1
position: 3070809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3070993:1
position: 3070993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3072441-3072718:1:exon

position:3072441:1
position: 3072441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3072718:1
position: 3072718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3074043-3074956:1:exon

position:3074043:1
position: 3074043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FGG
product: fibrinogen gamma chain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 1367 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_019977301.1
SIO_010081: FGG
subclass of: SO_0000673
so part of: FGG
location: join(3066881..3067130,3067232..3067276,3067458..3067641,3067753..3067846,3069332..3069462,3069759..3069892,3070809..3070993,3072441..3072718,3074043..3074212,3074735..3074956)
location: region:3066881-3074956:1
so has part: feature:3066881-3067130:1:exon
so has part: feature:3067232-3067276:1:exon
so has part: feature:3067458-3067641:1:exon
so has part: feature:3067753-3067846:1:exon
so has part: feature:3069332-3069462:1:exon
so has part: feature:3069759-3069892:1:exon
so has part: feature:3070809-3070993:1:exon
so has part: feature:3072441-3072718:1:exon
so has part: feature:3074043-3074212:1:exon
so has part: feature:3074735-3074956:1:exon

position:3066881:1
position: 3066881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3066881-3067130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3067232-3067276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3067458-3067641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3067753-3067846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3069332-3069462:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3069759-3069892:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3070809-3070993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3072441-3072718:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3074043-3074212:1:exon

position:3074212:1
position: 3074212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3074735-3074956:1:exon

position:3074735:1
position: 3074735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FGG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrinogen gamma chain isoform X2
translation: MSWSSHPPSVIFYILSLLSSACLAYVATRDNCCILDERFGSYCPTTCGIADFLNNYQTSVDKDLRTLEGILYQVENKTSEARELVKAIQISYNPDQPSKPNNIESATKNSKSMMEEIMKYETLISTHESTIRFLQEIYNSNSQKIVNLRDKVVQLEANCQEPCQDTVKIHDVTGRDCQDVANKGAKESGLYFIKPLKAKQQFLVYCEIDGSGNGWTVFQKRLDGSLDFKKNWIQYKEGFGHLSPTGNTEFWLGNEKIHLISTQSTIPYVLRIQLEDWNGRTSTADYASFKVTGENDKYRLTYAYFIGGDAGDAFDGYDFGDDSSDKFFTSHNGMQFSTWDSDNDKYDGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKTSTPNGYDNGIIWATWKSRWYSMKKTTMKIIPLNRLAIGEGQQHQLGGAKQAGDV
SIO_010081: FGG
subclass of: SO_0000673
so part of: FGG
location: join(3067059..3067130,3067232..3067276,3067458..3067641,3067753..3067846,3069332..3069462,3069759..3069892,3070809..3070993,3072441..3072718,3074043..3074212,3074735..3074749)
location: region:3067059-3074749:1
so has part: feature:3067059-3067130:1:exon
so has part: feature:3067232-3067276:1:exon
so has part: feature:3067458-3067641:1:exon
so has part: feature:3067753-3067846:1:exon
so has part: feature:3069332-3069462:1:exon
so has part: feature:3069759-3069892:1:exon
so has part: feature:3070809-3070993:1:exon
so has part: feature:3072441-3072718:1:exon
so has part: feature:3074043-3074212:1:exon
so has part: feature:3074735-3074749:1:exon

XP_019832860.1
type: Protein
SIO_000068: ncbiprotein

position:3067059:1
position: 3067059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3074749:1
position: 3074749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3067059-3067130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3067232-3067276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3067458-3067641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3067753-3067846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3069332-3069462:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3069759-3069892:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3070809-3070993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3072441-3072718:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3074043-3074212:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3074735-3074749:1:exon

FGG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FGG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrinogen gamma chain isoform X1
translation: MSWSSHPPSVIFYILSLLSSACLAYVATRDNCCILDERFGSYCPTTCGIADFLNNYQTSVDKDLRTLEGILYQVENKTSEARELVKAIQISYNPDQPSKPNNIESATKNSKSMMEEIMKYETLISTHESTIRFLQEIYNSNSQKIVNLRDKVVQLEANCQEPCQDTVKIHDVTGRDCQDVANKGAKESGLYFIKPLKAKQQFLVYCEIDGSGNGWTVFQKRLDGSLDFKKNWIQYKEGFGHLSPTGNTEFWLGNEKIHLISTQSTIPYVLRIQLEDWNGRTSTADYASFKVTGENDKYRLTYAYFIGGDAGDAFDGYDFGDDSSDKFFTSHNGMQFSTWDSDNDKYDGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKTSTPNGYDNGIIWATWKSRWYSMKKTTMKIIPLNRLAIGEGQQHQLGGAKQVGVEHHVEIEYD
SIO_010081: FGG
subclass of: SO_0000673
so part of: FGG
location: join(3067059..3067130,3067232..3067276,3067458..3067641,3067753..3067846,3069332..3069462,3069759..3069892,3070809..3070993,3072441..3072718,3074043..3074251)
location: region:3067059-3074251:1
so has part: feature:3067059-3067130:1:exon
so has part: feature:3067232-3067276:1:exon
so has part: feature:3067458-3067641:1:exon
so has part: feature:3067753-3067846:1:exon
so has part: feature:3069332-3069462:1:exon
so has part: feature:3069759-3069892:1:exon
so has part: feature:3070809-3070993:1:exon
so has part: feature:3072441-3072718:1:exon
so has part: feature:3074043-3074251:1:exon

XP_019832859.1
type: Protein
SIO_000068: ncbiprotein

position:3074251:1
position: 3074251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3067059-3067130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3067232-3067276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3067458-3067641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3067753-3067846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3069332-3069462:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3069759-3069892:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3070809-3070993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3072441-3072718:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3074043-3074251:1:exon

FGA
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: FGA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3086899..3095040
location: region:3086899-3095040:1
so has part: feature:3086899-3095040:1:exon
subclass of: SO_0000010

109571095
type: Gene
SIO_000068: ncbigene

position:3086899:1
position: 3086899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3095040:1
position: 3095040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3086899-3095040:1:exon

FGA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FGA
product: fibrinogen alpha chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 407 ESTs, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019977302.1
SIO_010081: FGA
subclass of: SO_0000673
so part of: FGA
location: join(3086899..3087045,3089233..3089367,3090174..3090357,3091393..3091538,3092115..3093401,3094142..3095040)
location: region:3086899-3095040:1
so has part: feature:3086899-3087045:1:exon
so has part: feature:3089233-3089367:1:exon
so has part: feature:3090174-3090357:1:exon
so has part: feature:3091393-3091538:1:exon
so has part: feature:3092115-3093401:1:exon
so has part: feature:3094142-3095040:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3086899-3087045:1:exon

position:3087045:1
position: 3087045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3089233-3089367:1:exon

position:3089233:1
position: 3089233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3089367:1
position: 3089367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3090174-3090357:1:exon

position:3090174:1
position: 3090174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3090357:1
position: 3090357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3091393-3091538:1:exon

position:3091393:1
position: 3091393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3091538:1
position: 3091538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3092115-3093401:1:exon

position:3092115:1
position: 3092115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3093401:1
position: 3093401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3094142-3095040:1:exon

position:3094142:1
position: 3094142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FGA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrinogen alpha chain
translation: MRTGRGGSLPFFQLGAPLESALSTAEMFSVRDLCLVLSLVGAIKTEDGSDPPSGDFLTEGGGVRGPRLVERQQSACKETGWPFCSDEDWNTKCPSGCRMKGLIDEVDQDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQISEDLRSRIEILRRKVIEQVQRINVLQKNVRDQLVDMKRLEVDIDIKIRSCKGSCSRALEHKVDLEDYKNQQKQLEQVIAINLLPSRDIQYLPLIKMSTITGPVPREFKSQLQEAPLEWKALLEMQQTKMVLETFGGDGHARGDSVSQGTGLAPGSPRKPGTSSIGNVNPGSYGPGSSGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNTGSSGSSSFRPDSSGHGNIRPSSPDWGTFREEGSVSSGTKQEFHTGKLVTTKGDKELLIDNEKVTSGHTTTTRRSCSKVITKTVTNADGRTETTKEVVKSEDGSDCGDADFDWHHTFPSRGNLDDFFHRDKDDFFTRSSHEFDGRTGLAPEFAALGESGSSSSKTSTHSKQFVSSSTTVNRGGSAIESKHFKMEDEAESLEDLGFKGAHGTQKGHTKARPARXCYDVLQTRPSGAQSGIFSIKLPASSKIFSVYCDQETGLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDKGEGEFWLGNEYLHLLTLRGSILRVELEDWAGKGAYAEYHLRVGSEAEDYALEVSSYKGTAGDALIEGSVEEGTEYTSHTGMRFSTFDRDADKWEDNCAEVYGGGWWYNNCQAANLNGIYYPGGSYDPRDNSPYEIENGVVWVPFRGADYSLRAVRMKIRPLVTQ
SIO_010081: FGA
subclass of: SO_0000673
so part of: FGA
location: join(3086914..3087045,3089233..3089367,3090174..3090357,3091393..3091538,3092115..3093401,3094142..3094849)
location: region:3086914-3094849:1
so has part: feature:3086914-3087045:1:exon
so has part: feature:3089233-3089367:1:exon
so has part: feature:3090174-3090357:1:exon
so has part: feature:3091393-3091538:1:exon
so has part: feature:3092115-3093401:1:exon
so has part: feature:3094142-3094849:1:exon

XP_019832861.1
type: Protein
SIO_000068: ncbiprotein

position:3086914:1
position: 3086914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3094849:1
position: 3094849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3086914-3087045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3089233-3089367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3090174-3090357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3091393-3091538:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3092115-3093401:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3094142-3094849:1:exon

FGB
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: FGB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3120691..3128545)
location: region:3120691-3128545:-1
so has part: feature:3120691-3128545:-1:exon
subclass of: SO_0000010

109571096
type: Gene
SIO_000068: ncbigene

position:3120691:-1
position: 3120691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3128545:-1
position: 3128545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3120691-3128545:-1:exon

FGB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FGB
product: fibrinogen beta chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1505 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_019977303.1
SIO_010081: FGB
subclass of: SO_0000673
so part of: FGB
location: complement(join(3120691..3121333,3121931..3122216,3122427..3122552,3122911..3123024,3123532..3123759,3124729..3124912,3125363..3125554,3128092..3128112,3128337..3128545))
location: region:3120691-3128545:-1
so has part: feature:3128337-3128545:-1:exon
so has part: feature:3128092-3128112:-1:exon
so has part: feature:3125363-3125554:-1:exon
so has part: feature:3124729-3124912:-1:exon
so has part: feature:3123532-3123759:-1:exon
so has part: feature:3122911-3123024:-1:exon
so has part: feature:3122427-3122552:-1:exon
so has part: feature:3121931-3122216:-1:exon
so has part: feature:3120691-3121333:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3128337-3128545:-1:exon

position:3128337:-1
position: 3128337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3128092-3128112:-1:exon

position:3128092:-1
position: 3128092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3128112:-1
position: 3128112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3125363-3125554:-1:exon

position:3125363:-1
position: 3125363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3125554:-1
position: 3125554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3124729-3124912:-1:exon

position:3124729:-1
position: 3124729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3124912:-1
position: 3124912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3123532-3123759:-1:exon

position:3123532:-1
position: 3123532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3123759:-1
position: 3123759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3122911-3123024:-1:exon

position:3122911:-1
position: 3122911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3123024:-1
position: 3123024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3122427-3122552:-1:exon

position:3122427:-1
position: 3122427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3122552:-1
position: 3122552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3121931-3122216:-1:exon

position:3121931:-1
position: 3121931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3122216:-1
position: 3122216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3120691-3121333:-1:exon

position:3121333:-1
position: 3121333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FGB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FGB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrinogen beta chain
translation: MISCNFEKFKTMKHLLLLLFCAFIVQAQFPTDYDEGQDDRPKVGLGARGHRPYDKKKEEAPSLRPVPPPISGGGYRARPATATVGQKKVERKPPDADGCLHADPDLGVLCPTGCKLQDTLVRQERPIRKSVEDLRNTVDSVSRTSSSTFQYITLLKSMWKGRQNQVQDNENVVNEYSSHLEKHQLYIDETVKNNIPTKLRVLRSILENLRSKIQKLESDVSTQMEYCRTPCTVTCNIPVVSGKECEEIIRNGGETSEMYLIQPEDSSKPYRVYCDMKTEKGGWTVIQNRQDGSVDFGRKWDPYKQGFGNIATNAEGKKYCGVPGEYWLGNDRISQLTNMGPTKLLIEMEDWKGDKVTALYEGFTVQNEANKYQLSVSKYKGTAGNALIEGASQLVGENRTMTIHNSMFFSTYDRDNDGWKTTDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGAYTWDMAKHGTDDGVVWMNWQGSWYSMKKMSMKIRPYFPEQ
SIO_010081: FGB
subclass of: SO_0000673
so part of: FGB
location: complement(join(3121102..3121333,3121931..3122216,3122427..3122552,3122911..3123024,3123532..3123759,3124729..3124912,3125363..3125554,3128092..3128112,3128337..3128441))
location: region:3121102-3128441:-1
so has part: feature:3128337-3128441:-1:exon
so has part: feature:3128092-3128112:-1:exon
so has part: feature:3125363-3125554:-1:exon
so has part: feature:3124729-3124912:-1:exon
so has part: feature:3123532-3123759:-1:exon
so has part: feature:3122911-3123024:-1:exon
so has part: feature:3122427-3122552:-1:exon
so has part: feature:3121931-3122216:-1:exon
so has part: feature:3121102-3121333:-1:exon

XP_019832862.1
type: Protein
SIO_000068: ncbiprotein

position:3121102:-1
position: 3121102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3128441:-1
position: 3128441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3128337-3128441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3128092-3128112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3125363-3125554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3124729-3124912:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3123532-3123759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3122911-3123024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3122427-3122552:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3121931-3122216:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3121102-3121333:-1:exon

PLRG1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PLRG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3138731..3157792
location: region:3138731-3157792:1
so has part: feature:3138731-3157792:1:exon
subclass of: SO_0000010

109571375
type: Gene
SIO_000068: ncbigene

position:3138731:1
position: 3138731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3157792:1
position: 3157792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3138731-3157792:1:exon

PLRG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PLRG1
product: pleiotropic regulator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 187 samples with support for all annotated introns
transcript id: XM_019977800.1
SIO_010081: PLRG1
subclass of: SO_0000673
so part of: PLRG1
location: join(3138731..3138854,3140894..3141000,3142028..3142170,3144201..3144254,3145405..3145498,3145720..3145801,3147336..3147437,3148381..3148473,3152220..3152369,3152460..3152561,3152895..3152997,3153677..3153785,3154748..3154887,3155341..3155430,3156151..3157792)
location: region:3138731-3157792:1
so has part: feature:3138731-3138854:1:exon
so has part: feature:3140894-3141000:1:exon
so has part: feature:3142028-3142170:1:exon
so has part: feature:3144201-3144254:1:exon
so has part: feature:3145405-3145498:1:exon
so has part: feature:3145720-3145801:1:exon
so has part: feature:3147336-3147437:1:exon
so has part: feature:3148381-3148473:1:exon
so has part: feature:3152220-3152369:1:exon
so has part: feature:3152460-3152561:1:exon
so has part: feature:3152895-3152997:1:exon
so has part: feature:3153677-3153785:1:exon
so has part: feature:3154748-3154887:1:exon
so has part: feature:3155341-3155430:1:exon
so has part: feature:3156151-3157792:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3138731-3138854:1:exon

position:3138854:1
position: 3138854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3140894-3141000:1:exon

position:3140894:1
position: 3140894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141000:1
position: 3141000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3142028-3142170:1:exon

position:3142028:1
position: 3142028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3142170:1
position: 3142170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3144201-3144254:1:exon

position:3144201:1
position: 3144201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3144254:1
position: 3144254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3145405-3145498:1:exon

position:3145405:1
position: 3145405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3145498:1
position: 3145498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3145720-3145801:1:exon

position:3145720:1
position: 3145720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3145801:1
position: 3145801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3147336-3147437:1:exon

position:3147336:1
position: 3147336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3147437:1
position: 3147437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3148381-3148473:1:exon

position:3148381:1
position: 3148381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3148473:1
position: 3148473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3152220-3152369:1:exon

position:3152220:1
position: 3152220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152369:1
position: 3152369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3152460-3152561:1:exon

position:3152460:1
position: 3152460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152561:1
position: 3152561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3152895-3152997:1:exon

position:3152895:1
position: 3152895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152997:1
position: 3152997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3153677-3153785:1:exon

position:3153677:1
position: 3153677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3153785:1
position: 3153785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3154748-3154887:1:exon

position:3154748:1
position: 3154748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3154887:1
position: 3154887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3155341-3155430:1:exon

position:3155341:1
position: 3155341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3155430:1
position: 3155430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3156151-3157792:1:exon

position:3156151:1
position: 3156151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLRG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PLRG1
product: pleiotropic regulator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 67 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 262 samples with support for all annotated introns
transcript id: XM_019977799.1
SIO_010081: PLRG1
subclass of: SO_0000673
so part of: PLRG1
location: join(3138733..3138854,3140894..3141000,3142028..3142170,3144201..3144254,3145405..3145498,3145720..3145801,3147336..3147437,3148381..3148473,3152220..3152369,3152460..3152561,3152895..3152997,3153677..3153785,3154748..3154887,3155341..3155534,3156151..3157792)
location: region:3138733-3157792:1
so has part: feature:3138733-3138854:1:exon
so has part: feature:3140894-3141000:1:exon
so has part: feature:3142028-3142170:1:exon
so has part: feature:3144201-3144254:1:exon
so has part: feature:3145405-3145498:1:exon
so has part: feature:3145720-3145801:1:exon
so has part: feature:3147336-3147437:1:exon
so has part: feature:3148381-3148473:1:exon
so has part: feature:3152220-3152369:1:exon
so has part: feature:3152460-3152561:1:exon
so has part: feature:3152895-3152997:1:exon
so has part: feature:3153677-3153785:1:exon
so has part: feature:3154748-3154887:1:exon
so has part: feature:3155341-3155534:1:exon
so has part: feature:3156151-3157792:1:exon

position:3138733:1
position: 3138733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3138733-3138854:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3140894-3141000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3142028-3142170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3144201-3144254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3145405-3145498:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3145720-3145801:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3147336-3147437:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3148381-3148473:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3152220-3152369:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3152460-3152561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3152895-3152997:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3153677-3153785:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3154748-3154887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3155341-3155534:1:exon

position:3155534:1
position: 3155534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3156151-3157792:1:exon

PLRG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PLRG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleiotropic regulator 1 isoform X2
translation: MVEEVQKHSVHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIKLRNEYGPVLHMPTSKENLKEKVPQNASDSYGHKQYPANQGQEVEYLVTGTHPYPPGPGVALTADTKIQRMPSESAAQSLAVALPASQARADANRPVPAGGEYRHPGAPDRAQPAGAVVMEGSNAKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDNRRNSSSQLEARNYQEKEILMCSLWLQFLFFCFFLAWP
SIO_010081: PLRG1
subclass of: SO_0000673
so part of: PLRG1
location: join(3138846..3138854,3140894..3141000,3142028..3142170,3144201..3144254,3145405..3145498,3145720..3145801,3147336..3147437,3148381..3148473,3152220..3152369,3152460..3152561,3152895..3152997,3153677..3153785,3154748..3154887,3155341..3155430,3156151..3156266)
location: region:3138846-3156266:1
so has part: feature:3138846-3138854:1:exon
so has part: feature:3140894-3141000:1:exon
so has part: feature:3142028-3142170:1:exon
so has part: feature:3144201-3144254:1:exon
so has part: feature:3145405-3145498:1:exon
so has part: feature:3145720-3145801:1:exon
so has part: feature:3147336-3147437:1:exon
so has part: feature:3148381-3148473:1:exon
so has part: feature:3152220-3152369:1:exon
so has part: feature:3152460-3152561:1:exon
so has part: feature:3152895-3152997:1:exon
so has part: feature:3153677-3153785:1:exon
so has part: feature:3154748-3154887:1:exon
so has part: feature:3155341-3155430:1:exon
so has part: feature:3156151-3156266:1:exon

XP_019833359.1
type: Protein
SIO_000068: ncbiprotein

position:3138846:1
position: 3138846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3156266:1
position: 3156266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3138846-3138854:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3140894-3141000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3142028-3142170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3144201-3144254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3145405-3145498:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3145720-3145801:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3147336-3147437:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3148381-3148473:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3152220-3152369:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3152460-3152561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3152895-3152997:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3153677-3153785:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3154748-3154887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3155341-3155430:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3156151-3156266:1:exon

PLRG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PLRG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleiotropic regulator 1 isoform X1
translation: MVEEVQKHSVHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIKLRNEYGPVLHMPTSKENLKEKVPQNASDSYGHKQYPANQGQEVEYLVTGTHPYPPGPGVALTADTKIQRMPSESAAQSLAVALPASQARADANRPVPAGGEYRHPGAPDRAQPAGAVVMEGSNAKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVYKEDDTATEETHPVSWKPEIIKRKRF
SIO_010081: PLRG1
subclass of: SO_0000673
so part of: PLRG1
location: join(3138846..3138854,3140894..3141000,3142028..3142170,3144201..3144254,3145405..3145498,3145720..3145801,3147336..3147437,3148381..3148473,3152220..3152369,3152460..3152561,3152895..3152997,3153677..3153785,3154748..3154887,3155341..3155534,3156151..3156210)
location: region:3138846-3156210:1
so has part: feature:3138846-3138854:1:exon
so has part: feature:3140894-3141000:1:exon
so has part: feature:3142028-3142170:1:exon
so has part: feature:3144201-3144254:1:exon
so has part: feature:3145405-3145498:1:exon
so has part: feature:3145720-3145801:1:exon
so has part: feature:3147336-3147437:1:exon
so has part: feature:3148381-3148473:1:exon
so has part: feature:3152220-3152369:1:exon
so has part: feature:3152460-3152561:1:exon
so has part: feature:3152895-3152997:1:exon
so has part: feature:3153677-3153785:1:exon
so has part: feature:3154748-3154887:1:exon
so has part: feature:3155341-3155534:1:exon
so has part: feature:3156151-3156210:1:exon

XP_019833358.1
type: Protein
SIO_000068: ncbiprotein

position:3156210:1
position: 3156210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3138846-3138854:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3140894-3141000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3142028-3142170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3144201-3144254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3145405-3145498:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3145720-3145801:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3147336-3147437:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3148381-3148473:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3152220-3152369:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3152460-3152561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3152895-3152997:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3153677-3153785:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3154748-3154887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3155341-3155534:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3156151-3156210:1:exon

LOC109571013
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3937021..3966670)
location: region:3937021-3966670:-1
so has part: feature:3937021-3966670:-1:exon
subclass of: SO_0000011

109571013
type: Gene
SIO_000068: ncbigene

position:3937021:-1
position: 3937021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3966670:-1
position: 3966670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3937021-3966670:-1:exon

LOC109571013
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109571013
product: uncharacterized LOC109571013
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_002182572.1
SIO_010081: LOC109571013
subclass of: SO_0000673
so part of: LOC109571013
location: complement(join(3937021..3937160,3966116..3966212,3966473..3966670))
location: region:3937021-3966670:-1
so has part: feature:3966473-3966670:-1:exon
so has part: feature:3966116-3966212:-1:exon
so has part: feature:3937021-3937160:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3966473-3966670:-1:exon

position:3966473:-1
position: 3966473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3966116-3966212:-1:exon

position:3966116:-1
position: 3966116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3966212:-1
position: 3966212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3937021-3937160:-1:exon

position:3937160:-1
position: 3937160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SFRP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: SFRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4155911..4164522
location: region:4155911-4164522:1
so has part: feature:4155911-4164522:1:exon
subclass of: SO_0000010

109571482
type: Gene
SIO_000068: ncbigene

position:4155911:1
position: 4155911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4164522:1
position: 4164522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4155911-4164522:1:exon

SFRP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SFRP2
product: secreted frizzled related protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 152 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 197 samples with support for all annotated introns
transcript id: XM_019977992.1
SIO_010081: SFRP2
subclass of: SO_0000673
so part of: SFRP2
location: join(4155911..4156683,4159062..4159142,4163340..4164522)
location: region:4155911-4164522:1
so has part: feature:4155911-4156683:1:exon
so has part: feature:4159062-4159142:1:exon
so has part: feature:4163340-4164522:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4155911-4156683:1:exon

position:4156683:1
position: 4156683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4159062-4159142:1:exon

position:4159062:1
position: 4159062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4159142:1
position: 4159142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4163340-4164522:1:exon

position:4163340:1
position: 4163340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SFRP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SFRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secreted frizzled-related protein 2
translation: MLXXXGSLLLIVLASHCCLGSARGLFFGQSDFPYKRSNCKPIPANLQLCHGIEYQNMRLPNLLGHETMKEVLEQAGAWIPLVMKQCHPDTKKFLCSLFAPVCLDDLDETIQPCHSLCVQVKDRCAPVMSAFGFPWPDMLDCDRFPQDNDLCIPLASSDHLLPATEEAPKVCEACKTKNEDDNDIMETLCKNDFALKIKVKEITYINRDTKIILETKSKTIYKLNGVSEKDLKKSVLWLKDSLQCTCEEMNDINAPYLVMGQKLGGELVITSVKRWQKGQREFKRISRSFRKLQC
SIO_010081: SFRP2
subclass of: SO_0000673
so part of: SFRP2
location: join(4156185..4156683,4159062..4159142,4163340..4163644)
location: region:4156185-4163644:1
so has part: feature:4156185-4156683:1:exon
so has part: feature:4159062-4159142:1:exon
so has part: feature:4163340-4163644:1:exon

XP_019833551.1
type: Protein
SIO_000068: ncbiprotein

position:4156185:1
position: 4156185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4163644:1
position: 4163644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4156185-4156683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4159062-4159142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4163340-4163644:1:exon

RNF175
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: RNF175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4206731..4278355
location: region:4206731-4278355:1
so has part: feature:4206731-4278355:1:exon
subclass of: SO_0000010

109570852
type: Gene
SIO_000068: ncbigene

position:4206731:1
position: 4206731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4278355:1
position: 4278355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4206731-4278355:1:exon

RNF175
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RNF175
product: ring finger protein 175
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019976995.1
SIO_010081: RNF175
subclass of: SO_0000673
so part of: RNF175
location: join(4206731..4206781,4222049..4222086,4225327..4225468,4250656..4250810,4263948..4264055,4267262..4267382,4271923..4272056,4275539..4275640,4277837..4278355)
location: region:4206731-4278355:1
so has part: feature:4206731-4206781:1:exon
so has part: feature:4222049-4222086:1:exon
so has part: feature:4225327-4225468:1:exon
so has part: feature:4250656-4250810:1:exon
so has part: feature:4263948-4264055:1:exon
so has part: feature:4267262-4267382:1:exon
so has part: feature:4271923-4272056:1:exon
so has part: feature:4275539-4275640:1:exon
so has part: feature:4277837-4278355:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4206731-4206781:1:exon

position:4206781:1
position: 4206781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4222049-4222086:1:exon

position:4222049:1
position: 4222049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4222086:1
position: 4222086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4225327-4225468:1:exon

position:4225327:1
position: 4225327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4225468:1
position: 4225468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4250656-4250810:1:exon

position:4250656:1
position: 4250656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4250810:1
position: 4250810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4263948-4264055:1:exon

position:4263948:1
position: 4263948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4264055:1
position: 4264055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4267262-4267382:1:exon

position:4267262:1
position: 4267262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4267382:1
position: 4267382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4271923-4272056:1:exon

position:4271923:1
position: 4271923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4272056:1
position: 4272056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4275539-4275640:1:exon

position:4275539:1
position: 4275539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4275640:1
position: 4275640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4277837-4278355:1:exon

position:4277837:1
position: 4277837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RNF175
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:4277955..4277957,aa:OTHER)
product: LOW QUALITY PROTEIN: RING finger protein 175
translation: MAARAAPGLEGAPQHEQISHTKLSADDEWNLQQERMYKMHRGHESMHVEMVLIFLCALVVAQIVLVQWRQRHGRSYNLVTLLQMWVVPLYFTIKLYWWRFLSMWGMFSVITSYILFRATRKPLSGRTPRLVYKWFLLIYKLSYAFGVVGYLAIIFTMCGFHLFFRIKARDSMDFGIVSLFYGLYYGVMGRDFAEICSDYMASTLGFYSGSGMPTRSLSDDICAVCGQKIIVELDEEGLIENTYQLSCKHVFHEFCIRGWCIVGKKQTCPYCKEKVDLKRMINNPWERTHFLYGQILDWLRYLVAWQPVVIGIVQGINYSLGLEXHXTLTPEAMYCMXKYFLTLF
SIO_010081: RNF175
subclass of: SO_0000673
so part of: RNF175
location: join(4206731..4206781,4222049..4222086,4225327..4225468,4250656..4250810,4263948..4264055,4267262..4267382,4271923..4272056,4275539..4275640,4277837..4278020)
location: region:4206731-4278020:1
so has part: feature:4206731-4206781:1:exon
so has part: feature:4222049-4222086:1:exon
so has part: feature:4225327-4225468:1:exon
so has part: feature:4250656-4250810:1:exon
so has part: feature:4263948-4264055:1:exon
so has part: feature:4267262-4267382:1:exon
so has part: feature:4271923-4272056:1:exon
so has part: feature:4275539-4275640:1:exon
so has part: feature:4277837-4278020:1:exon

XP_019832554.1
type: Protein
SIO_000068: ncbiprotein

position:4278020:1
position: 4278020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4206731-4206781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4222049-4222086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4225327-4225468:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4250656-4250810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4263948-4264055:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4267262-4267382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4271923-4272056:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4275539-4275640:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4277837-4278020:1:exon

TLR2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TLR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4281309..4294742)
location: region:4281309-4294742:-1
so has part: feature:4281309-4294742:-1:exon
subclass of: SO_0000010

109571498
type: Gene
SIO_000068: ncbigene

position:4281309:-1
position: 4281309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4294742:-1
position: 4294742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4281309-4294742:-1:exon

TLR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TLR2
product: toll like receptor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 13 ESTs, 45 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019978020.1
SIO_010081: TLR2
subclass of: SO_0000673
so part of: TLR2
location: complement(join(4281309..4284854,4294568..4294742))
location: region:4281309-4294742:-1
so has part: feature:4294568-4294742:-1:exon
so has part: feature:4281309-4284854:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4294568-4294742:-1:exon

position:4294568:-1
position: 4294568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4281309-4284854:-1:exon

position:4284854:-1
position: 4284854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TLR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TLR2
product: toll like receptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 13 ESTs, 45 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_019978019.1
SIO_010081: TLR2
subclass of: SO_0000673
so part of: TLR2
location: complement(join(4281309..4284854,4294085..4294305))
location: region:4281309-4294305:-1
so has part: feature:4294085-4294305:-1:exon
so has part: feature:4281309-4284854:-1:exon

position:4294305:-1
position: 4294305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4294085-4294305:-1:exon

position:4294085:-1
position: 4294085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4281309-4284854:-1:exon

TLR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TLR2
product: toll like receptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 13 ESTs, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_019978018.1
SIO_010081: TLR2
subclass of: SO_0000673
so part of: TLR2
location: complement(join(4281309..4284854,4293563..4293760))
location: region:4281309-4293760:-1
so has part: feature:4293563-4293760:-1:exon
so has part: feature:4281309-4284854:-1:exon

position:4293760:-1
position: 4293760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4293563-4293760:-1:exon

position:4293563:-1
position: 4293563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4281309-4284854:-1:exon

TLR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TLR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll-like receptor 2
translation: MPRALWTAWVWAVIILSTEGASDQASSLSCDPTGVCDGHSRSLNSIPSGLTAGVKSLDLSNNEITYVXNRDLQRCVNLKTLRLGANEIHTVEEDSFFHLRNLEYLDLSYNRLSNLSSSXFRSLYVLKFLNLLGNLYKTLGETSLFSHLPNLRTLKVGNSNSFTEIHEKDFTGLTFLEELEISAQNLQIYVPKSLKSIQNISHLILHLKQPVLLVDILVDIVSSLDCLELRDTNLHTFHFSEASISEMSTSVKKLIFRNVQFTDESFVEVVKLFNYVSGILEVEFDDCTHDGIGDFRALSLDRIRHLGNVETLTIRKLHIPQFFLFQDLSSIYPLTGKVKRVTIENSKVFLVPCLLSQHLKSLEYLDLSENLMSEETLKNSACKDAWPFLQTLVLRQNRLKSLEKTGELLLTLENLNSLDISKNNFLSMPETCQWPGKMKQLNLSSTRIHSLTQCLPQTLEILDVSNNNLDSFSLILPQLKELYISRNKLKTLPDASFLPVLXVMRISRNIINTFSKEQLDSFQQLKTLEAGGNNFICSCDFLSFTQGQQALGRVLVDWPDDYHCDSPSHVRGQRVQDARLSLSECHRAAVVSAACCALFLLLLLXGVLCHRFHGLWYMKMMWAWLQAKRKPRKAPRRDICYDAFVSYSERDSYWVENLMVQELEQFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYELDFSHFRLFDENNDAAILILLEPIDKKAIPQRFCKLRKIMNTKTYLEWPVDETQQEGFWLNLRAAIRS
SIO_010081: TLR2
subclass of: SO_0000673
so part of: TLR2
location: complement(4282484..4284838)
location: region:4282484-4284838:-1
so has part: feature:4282484-4284838:-1:exon

XP_019833577.1
type: Protein
SIO_000068: ncbiprotein

position:4282484:-1
position: 4282484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4284838:-1
position: 4284838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4282484-4284838:-1:exon

TLR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TLR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll-like receptor 2
translation: MPRALWTAWVWAVIILSTEGASDQASSLSCDPTGVCDGHSRSLNSIPSGLTAGVKSLDLSNNEITYVXNRDLQRCVNLKTLRLGANEIHTVEEDSFFHLRNLEYLDLSYNRLSNLSSSXFRSLYVLKFLNLLGNLYKTLGETSLFSHLPNLRTLKVGNSNSFTEIHEKDFTGLTFLEELEISAQNLQIYVPKSLKSIQNISHLILHLKQPVLLVDILVDIVSSLDCLELRDTNLHTFHFSEASISEMSTSVKKLIFRNVQFTDESFVEVVKLFNYVSGILEVEFDDCTHDGIGDFRALSLDRIRHLGNVETLTIRKLHIPQFFLFQDLSSIYPLTGKVKRVTIENSKVFLVPCLLSQHLKSLEYLDLSENLMSEETLKNSACKDAWPFLQTLVLRQNRLKSLEKTGELLLTLENLNSLDISKNNFLSMPETCQWPGKMKQLNLSSTRIHSLTQCLPQTLEILDVSNNNLDSFSLILPQLKELYISRNKLKTLPDASFLPVLXVMRISRNIINTFSKEQLDSFQQLKTLEAGGNNFICSCDFLSFTQGQQALGRVLVDWPDDYHCDSPSHVRGQRVQDARLSLSECHRAAVVSAACCALFLLLLLXGVLCHRFHGLWYMKMMWAWLQAKRKPRKAPRRDICYDAFVSYSERDSYWVENLMVQELEQFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYELDFSHFRLFDENNDAAILILLEPIDKKAIPQRFCKLRKIMNTKTYLEWPVDETQQEGFWLNLRAAIRS
SIO_010081: TLR2
subclass of: SO_0000673
so part of: TLR2
location: complement(4282484..4284838)
location: region:4282484-4284838:-1
so has part: feature:4282484-4284838:-1:exon

XP_019833578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4282484-4284838:-1:exon

TLR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TLR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll-like receptor 2
translation: MPRALWTAWVWAVIILSTEGASDQASSLSCDPTGVCDGHSRSLNSIPSGLTAGVKSLDLSNNEITYVXNRDLQRCVNLKTLRLGANEIHTVEEDSFFHLRNLEYLDLSYNRLSNLSSSXFRSLYVLKFLNLLGNLYKTLGETSLFSHLPNLRTLKVGNSNSFTEIHEKDFTGLTFLEELEISAQNLQIYVPKSLKSIQNISHLILHLKQPVLLVDILVDIVSSLDCLELRDTNLHTFHFSEASISEMSTSVKKLIFRNVQFTDESFVEVVKLFNYVSGILEVEFDDCTHDGIGDFRALSLDRIRHLGNVETLTIRKLHIPQFFLFQDLSSIYPLTGKVKRVTIENSKVFLVPCLLSQHLKSLEYLDLSENLMSEETLKNSACKDAWPFLQTLVLRQNRLKSLEKTGELLLTLENLNSLDISKNNFLSMPETCQWPGKMKQLNLSSTRIHSLTQCLPQTLEILDVSNNNLDSFSLILPQLKELYISRNKLKTLPDASFLPVLXVMRISRNIINTFSKEQLDSFQQLKTLEAGGNNFICSCDFLSFTQGQQALGRVLVDWPDDYHCDSPSHVRGQRVQDARLSLSECHRAAVVSAACCALFLLLLLXGVLCHRFHGLWYMKMMWAWLQAKRKPRKAPRRDICYDAFVSYSERDSYWVENLMVQELEQFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYELDFSHFRLFDENNDAAILILLEPIDKKAIPQRFCKLRKIMNTKTYLEWPVDETQQEGFWLNLRAAIRS
SIO_010081: TLR2
subclass of: SO_0000673
so part of: TLR2
location: complement(4282484..4284838)
location: region:4282484-4284838:-1
so has part: feature:4282484-4284838:-1:exon

XP_019833579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4282484-4284838:-1:exon

KIAA0922
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: KIAA0922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4323411..4493447)
location: region:4323411-4493447:-1
so has part: feature:4323411-4493447:-1:exon
subclass of: SO_0000010

109570853
type: Gene
SIO_000068: ncbigene

position:4323411:-1
position: 4323411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4493447:-1
position: 4493447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4323411-4493447:-1:exon

KIAA0922
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: KIAA0922
product: KIAA0922 ortholog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019976997.1
SIO_010081: KIAA0922
subclass of: SO_0000673
so part of: KIAA0922
location: complement(join(4323411..4323817,4324443..4324582,4325885..4326120,4327784..4327860,4328034..4328107,4333058..4333137,4334026..4334104,4336491..4336676,4337771..4337937,4340756..4340880,4349254..4349402,4356113..4356711,4357037..4357186,4357813..4357998,4358198..4358384,4360393..4360535,4363142..4363269,4366065..4366137,4367111..4367220,4368374..4368515,4370291..4370408,4371454..4371523,4372823..4372993,4373552..4373705,4374237..4374327,4376520..4376628,4376952..4377010,4378257..4378410,4378607..4378684,4401385..4401495,4402343..4402459,4403460..4403583,4408396..4408464,4480374..4480417,4493340..4493447))
location: region:4323411-4493447:-1
so has part: feature:4493340-4493447:-1:exon
so has part: feature:4480374-4480417:-1:exon
so has part: feature:4408396-4408464:-1:exon
so has part: feature:4403460-4403583:-1:exon
so has part: feature:4402343-4402459:-1:exon
so has part: feature:4401385-4401495:-1:exon
so has part: feature:4378607-4378684:-1:exon
so has part: feature:4378257-4378410:-1:exon
so has part: feature:4376952-4377010:-1:exon
so has part: feature:4376520-4376628:-1:exon
so has part: feature:4374237-4374327:-1:exon
so has part: feature:4373552-4373705:-1:exon
so has part: feature:4372823-4372993:-1:exon
so has part: feature:4371454-4371523:-1:exon
so has part: feature:4370291-4370408:-1:exon
so has part: feature:4368374-4368515:-1:exon
so has part: feature:4367111-4367220:-1:exon
so has part: feature:4366065-4366137:-1:exon
so has part: feature:4363142-4363269:-1:exon
so has part: feature:4360393-4360535:-1:exon
so has part: feature:4358198-4358384:-1:exon
so has part: feature:4357813-4357998:-1:exon
so has part: feature:4357037-4357186:-1:exon
so has part: feature:4356113-4356711:-1:exon
so has part: feature:4349254-4349402:-1:exon
so has part: feature:4340756-4340880:-1:exon
so has part: feature:4337771-4337937:-1:exon
so has part: feature:4336491-4336676:-1:exon
so has part: feature:4334026-4334104:-1:exon
so has part: feature:4333058-4333137:-1:exon
so has part: feature:4328034-4328107:-1:exon
so has part: feature:4327784-4327860:-1:exon
so has part: feature:4325885-4326120:-1:exon
so has part: feature:4324443-4324582:-1:exon
so has part: feature:4323411-4323817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4493340-4493447:-1:exon

position:4493340:-1
position: 4493340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4480374-4480417:-1:exon

position:4480374:-1
position: 4480374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4480417:-1
position: 4480417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4408396-4408464:-1:exon

position:4408396:-1
position: 4408396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4408464:-1
position: 4408464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4403460-4403583:-1:exon

position:4403460:-1
position: 4403460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4403583:-1
position: 4403583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4402343-4402459:-1:exon

position:4402343:-1
position: 4402343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4402459:-1
position: 4402459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4401385-4401495:-1:exon

position:4401385:-1
position: 4401385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4401495:-1
position: 4401495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4378607-4378684:-1:exon

position:4378607:-1
position: 4378607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4378684:-1
position: 4378684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4378257-4378410:-1:exon

position:4378257:-1
position: 4378257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4378410:-1
position: 4378410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4376952-4377010:-1:exon

position:4376952:-1
position: 4376952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4377010:-1
position: 4377010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4376520-4376628:-1:exon

position:4376520:-1
position: 4376520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4376628:-1
position: 4376628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4374237-4374327:-1:exon

position:4374237:-1
position: 4374237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4374327:-1
position: 4374327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4373552-4373705:-1:exon

position:4373552:-1
position: 4373552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4373705:-1
position: 4373705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4372823-4372993:-1:exon

position:4372823:-1
position: 4372823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4372993:-1
position: 4372993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4371454-4371523:-1:exon

position:4371454:-1
position: 4371454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4371523:-1
position: 4371523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4370291-4370408:-1:exon

position:4370291:-1
position: 4370291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4370408:-1
position: 4370408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4368374-4368515:-1:exon

position:4368374:-1
position: 4368374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4368515:-1
position: 4368515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4367111-4367220:-1:exon

position:4367111:-1
position: 4367111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4367220:-1
position: 4367220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4366065-4366137:-1:exon

position:4366065:-1
position: 4366065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4366137:-1
position: 4366137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4363142-4363269:-1:exon

position:4363142:-1
position: 4363142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4363269:-1
position: 4363269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4360393-4360535:-1:exon

position:4360393:-1
position: 4360393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4360535:-1
position: 4360535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4358198-4358384:-1:exon

position:4358198:-1
position: 4358198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4358384:-1
position: 4358384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4357813-4357998:-1:exon

position:4357813:-1
position: 4357813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4357998:-1
position: 4357998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4357037-4357186:-1:exon

position:4357037:-1
position: 4357037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4357186:-1
position: 4357186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4356113-4356711:-1:exon

position:4356113:-1
position: 4356113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4356711:-1
position: 4356711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4349254-4349402:-1:exon

position:4349254:-1
position: 4349254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4349402:-1
position: 4349402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4340756-4340880:-1:exon

position:4340756:-1
position: 4340756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4340880:-1
position: 4340880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4337771-4337937:-1:exon

position:4337771:-1
position: 4337771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4337937:-1
position: 4337937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4336491-4336676:-1:exon

position:4336491:-1
position: 4336491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4336676:-1
position: 4336676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4334026-4334104:-1:exon

position:4334026:-1
position: 4334026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4334104:-1
position: 4334104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4333058-4333137:-1:exon

position:4333058:-1
position: 4333058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4333137:-1
position: 4333137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:4328034-4328107:-1:exon

position:4328034:-1
position: 4328034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4328107:-1
position: 4328107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:4327784-4327860:-1:exon

position:4327784:-1
position: 4327784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4327860:-1
position: 4327860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:4325885-4326120:-1:exon

position:4325885:-1
position: 4325885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4326120:-1
position: 4326120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:4324443-4324582:-1:exon

position:4324443:-1
position: 4324443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4324582:-1
position: 4324582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:4323411-4323817:-1:exon

position:4323817:-1
position: 4323817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIAA0922
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: KIAA0922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 131-like
translation: MFFGVGAAIEPMPNVVELWQAEEGELLLPTQGDSEDDTEEQSQEQSFSDKLFSGKGLHFQPSVLDFGVQFLGQPAAKILYAYNPSRESEVVVNSVFTAARHFHVPPVHCRVIPAMGKTSFRIIFLPTEEGSIESSLFINTSSHGVLSYHVSGFGTRVMSAKGSAEQLPNAYFLLPQVQTVQLSQTQAETTNSSLLQVQLECSLHNKVCQRLKSCYVESDDVLRLQMSIIVTMENTSKEFEENTQDLLDHLSIIYVATDKSESSDDSAVNMYILHSGNSLIWIQDVRHFSQRDVLSLQFEPVLLPTSTTNFTKIASFTCKAPSCESGAREDGKKKDTPTLKACLSSPVVQGYFRMDPSATQFHIENHENTSGLWSLWYLNHFDHGVVLNDVFVSKETKHVLKILNFTGPLFLPPGCWKIFSLKLAVKDIAINVFTHVFLTTNIGAVFAIPLQIYSAPTKEGSLGFEVIAHCGMHYFMGKSKAENPDWEGSLSLDPSTWDVDSELANTLYERWKKLKHGDVCKRTVLGVTRFAHSKKSKESEPFAVFLPRLVPEPGLVLNFSATALRNSMVKYFVVKNPSSWPVSLQLLPVSLYPKPEAAARLLHKWFGTDMQMINLTTSEFQLTKACPYLGVQSEGSRFGILHLHLQPLERKRVGVVFTPADYGKVSSLILIRNNLTVIDMIGVEGFGARELLKVGGRLPGTGGSLRFKVPESTLMDCRRQLKDSKQILSITKNFKVENIGPLPITVTSLKINGYNCQGYGFEVLDCHQFSLGPNTSRDISIVFTPDFTSSWVIRELTLVTAADLEFRFTLNVTLPHHLLPLCADVVPGPSWEESFWRLTVFFVSLSLLGVILIAFQQAQYILMEFMKTRQRQNASSSSQQSTXPVDVISXHXHKSNCKNFLDAYAPSDKGRGKSCLPVSSPQSRTQNATKRSPATCGHSQKKHKCSVYYGRHRGXAVASSAGAPSEDRPAPAKAGGCPAGASEAWVGLRCAGGLSANLQKSLALPRSFLGKDENTLKSAVAASSPSSECHVKEGAQTCVFPKETDFQVSESVAELKEREVCPMKTPKKLPENHLPRSSPQCQSDLPDISRKNNGNNQQVPVKNEVDNCESLKKVDTKSSSEKKIHKAAKEDGCSEKQDIPSIEQEDPYRKKALQEKKEGNVQNLNWNKNRMCRKNKKRGAAQVLRPSDQSELKLVCSEFERSELSSDINVRNWRIQENPGEACKAGASSGSSLPATQGEAEGYFQKPGKKGAEKSCSDSGSDCGSSSGSVRASRGSWGSWSSASSSDGDRKPAVGPPRCLLPGDSVSQNDFSSEAPISLNLSRNICNPTDVSGLPAPADAPCPSLPAGPAAAEEQGLCAPGDLWPAQPVCVTGGFGCALEVRAPAAWGPRVRGWEPVLTAAWVPSSCDDKVLLLFSQTEELAVMRMLDSKILFLFLSLVCRHPVSETRPLVFXSSFIDWNATCEGQFPSVYCPLELNDYNAFPEEGMNYPSGFPCPAEVQTDFIDHSSPSAWGSPPSVPTAWGHASLISSPPYLTSTRSLSPMSGLFGSIWAPQSDVYENCCAINPTTEHSAHMENQAVMCKEYYPGFNPFRAYMDLDIWTSTANRNANFPLSRDSSYCGNV
SIO_010081: KIAA0922
subclass of: SO_0000673
so part of: KIAA0922
location: complement(join(4323542..4323817,4324443..4324582,4325885..4326120,4327784..4327860,4328034..4328107,4333058..4333137,4334026..4334104,4336491..4336676,4337771..4337937,4340756..4340880,4349254..4349402,4356113..4356711,4357037..4357186,4357813..4357998,4358198..4358384,4360393..4360535,4363142..4363269,4366065..4366137,4367111..4367220,4368374..4368515,4370291..4370408,4371454..4371523,4372823..4372993,4373552..4373705,4374237..4374327,4376520..4376628,4376952..4377010,4378257..4378410,4378607..4378684,4401385..4401495,4402343..4402459,4403460..4403583,4408396..4408464,4480374..4480417,4493340..4493432))
location: region:4323542-4493432:-1
so has part: feature:4493340-4493432:-1:exon
so has part: feature:4480374-4480417:-1:exon
so has part: feature:4408396-4408464:-1:exon
so has part: feature:4403460-4403583:-1:exon
so has part: feature:4402343-4402459:-1:exon
so has part: feature:4401385-4401495:-1:exon
so has part: feature:4378607-4378684:-1:exon
so has part: feature:4378257-4378410:-1:exon
so has part: feature:4376952-4377010:-1:exon
so has part: feature:4376520-4376628:-1:exon
so has part: feature:4374237-4374327:-1:exon
so has part: feature:4373552-4373705:-1:exon
so has part: feature:4372823-4372993:-1:exon
so has part: feature:4371454-4371523:-1:exon
so has part: feature:4370291-4370408:-1:exon
so has part: feature:4368374-4368515:-1:exon
so has part: feature:4367111-4367220:-1:exon
so has part: feature:4366065-4366137:-1:exon
so has part: feature:4363142-4363269:-1:exon
so has part: feature:4360393-4360535:-1:exon
so has part: feature:4358198-4358384:-1:exon
so has part: feature:4357813-4357998:-1:exon
so has part: feature:4357037-4357186:-1:exon
so has part: feature:4356113-4356711:-1:exon
so has part: feature:4349254-4349402:-1:exon
so has part: feature:4340756-4340880:-1:exon
so has part: feature:4337771-4337937:-1:exon
so has part: feature:4336491-4336676:-1:exon
so has part: feature:4334026-4334104:-1:exon
so has part: feature:4333058-4333137:-1:exon
so has part: feature:4328034-4328107:-1:exon
so has part: feature:4327784-4327860:-1:exon
so has part: feature:4325885-4326120:-1:exon
so has part: feature:4324443-4324582:-1:exon
so has part: feature:4323542-4323817:-1:exon

XP_019832556.1
type: Protein
SIO_000068: ncbiprotein

position:4323542:-1
position: 4323542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4493432:-1
position: 4493432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4493340-4493432:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4480374-4480417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4408396-4408464:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4403460-4403583:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4402343-4402459:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4401385-4401495:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4378607-4378684:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4378257-4378410:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4376952-4377010:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4376520-4376628:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4374237-4374327:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4373552-4373705:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4372823-4372993:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4371454-4371523:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4370291-4370408:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4368374-4368515:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4367111-4367220:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4366065-4366137:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4363142-4363269:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4360393-4360535:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4358198-4358384:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4357813-4357998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4357037-4357186:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4356113-4356711:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4349254-4349402:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4340756-4340880:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4337771-4337937:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4336491-4336676:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4334026-4334104:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4333058-4333137:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4328034-4328107:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4327784-4327860:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4325885-4326120:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4324443-4324582:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4323542-4323817:-1:exon

MND1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: MND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4540547..4635645)
location: region:4540547-4635645:-1
so has part: feature:4540547-4635645:-1:exon
subclass of: SO_0000010

109570997
type: Gene
SIO_000068: ncbigene

position:4540547:-1
position: 4540547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4635645:-1
position: 4635645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4540547-4635645:-1:exon

MND1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MND1
product: meiotic nuclear divisions 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_019977124.1
SIO_010081: MND1
subclass of: SO_0000673
so part of: MND1
location: complement(join(4540547..4540805,4546656..4546700,4561619..4561733,4564674..4564748,4618254..4618402,4621792..4621849,4629741..4629806,4634899..4635645))
location: region:4540547-4635645:-1
so has part: feature:4634899-4635645:-1:exon
so has part: feature:4629741-4629806:-1:exon
so has part: feature:4621792-4621849:-1:exon
so has part: feature:4618254-4618402:-1:exon
so has part: feature:4564674-4564748:-1:exon
so has part: feature:4561619-4561733:-1:exon
so has part: feature:4546656-4546700:-1:exon
so has part: feature:4540547-4540805:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4634899-4635645:-1:exon

position:4634899:-1
position: 4634899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4629741-4629806:-1:exon

position:4629741:-1
position: 4629741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4629806:-1
position: 4629806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4621792-4621849:-1:exon

position:4621792:-1
position: 4621792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4621849:-1
position: 4621849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4618254-4618402:-1:exon

position:4618254:-1
position: 4618254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4618402:-1
position: 4618402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4564674-4564748:-1:exon

position:4564674:-1
position: 4564674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4564748:-1
position: 4564748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4561619-4561733:-1:exon

position:4561619:-1
position: 4561619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4561733:-1
position: 4561733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4546656-4546700:-1:exon

position:4546656:-1
position: 4546656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4546700:-1
position: 4546700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4540547-4540805:-1:exon

position:4540805:-1
position: 4540805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiotic nuclear division protein 1 homolog
translation: MSKKKGLSAEEKRTRMMEIFYETKDVFQLKDMEKIAPKEKGITAMSVKEVLQSLVDDGMVDCERIGTSNYYWAFPSKALHARKXKLEVLDSQLSEGNQKYANLQKSIEKAKVGRHETEERTMLAKELSSLRDQREQLKAEVEKYRECDPQVVEEIRQANQVAKEAANRWTDNIFAIKSWAKRKFGFEENKIDKNFGIPEDFDYID
SIO_010081: MND1
subclass of: SO_0000673
so part of: MND1
location: complement(join(4540699..4540805,4546656..4546700,4561619..4561733,4564674..4564748,4618254..4618402,4621792..4621849,4629741..4629806,4634899..4634901))
location: region:4540699-4634901:-1
so has part: feature:4634899-4634901:-1:exon
so has part: feature:4629741-4629806:-1:exon
so has part: feature:4621792-4621849:-1:exon
so has part: feature:4618254-4618402:-1:exon
so has part: feature:4564674-4564748:-1:exon
so has part: feature:4561619-4561733:-1:exon
so has part: feature:4546656-4546700:-1:exon
so has part: feature:4540699-4540805:-1:exon

XP_019832683.1
type: Protein
SIO_000068: ncbiprotein

position:4540699:-1
position: 4540699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4634901:-1
position: 4634901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4634899-4634901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4629741-4629806:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4621792-4621849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4618254-4618402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4564674-4564748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4561619-4561733:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4546656-4546700:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4540699-4540805:-1:exon

TRIM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TRIM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4646314..4774216)
location: region:4646314-4774216:-1
so has part: feature:4646314-4774216:-1:exon
subclass of: SO_0000010

109571173
type: Gene
SIO_000068: ncbigene

position:4646314:-1
position: 4646314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4774216:-1
position: 4774216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4646314-4774216:-1:exon

TRIM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TRIM2
product: tripartite motif containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 71 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_019977429.1
SIO_010081: TRIM2
subclass of: SO_0000673
so part of: TRIM2
location: complement(join(4646314..4650490,4651490..4651630,4656124..4656194,4657252..4657420,4669740..4669907,4670411..4670514,4683361..4684084,4685163..4685343,4686511..4686662,4699728..4699965,4704905..4705086,4774085..4774216))
location: region:4646314-4774216:-1
so has part: feature:4774085-4774216:-1:exon
so has part: feature:4704905-4705086:-1:exon
so has part: feature:4699728-4699965:-1:exon
so has part: feature:4686511-4686662:-1:exon
so has part: feature:4685163-4685343:-1:exon
so has part: feature:4683361-4684084:-1:exon
so has part: feature:4670411-4670514:-1:exon
so has part: feature:4669740-4669907:-1:exon
so has part: feature:4657252-4657420:-1:exon
so has part: feature:4656124-4656194:-1:exon
so has part: feature:4651490-4651630:-1:exon
so has part: feature:4646314-4650490:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4774085-4774216:-1:exon

position:4774085:-1
position: 4774085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4704905-4705086:-1:exon

position:4704905:-1
position: 4704905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4705086:-1
position: 4705086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4699728-4699965:-1:exon

position:4699728:-1
position: 4699728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4699965:-1
position: 4699965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4686511-4686662:-1:exon

position:4686511:-1
position: 4686511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4686662:-1
position: 4686662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4685163-4685343:-1:exon

position:4685163:-1
position: 4685163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4685343:-1
position: 4685343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4683361-4684084:-1:exon

position:4683361:-1
position: 4683361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4684084:-1
position: 4684084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4670411-4670514:-1:exon

position:4670411:-1
position: 4670411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4670514:-1
position: 4670514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4669740-4669907:-1:exon

position:4669740:-1
position: 4669740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4669907:-1
position: 4669907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4657252-4657420:-1:exon

position:4657252:-1
position: 4657252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4657420:-1
position: 4657420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4656124-4656194:-1:exon

position:4656124:-1
position: 4656124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4656194:-1
position: 4656194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4651490-4651630:-1:exon

position:4651490:-1
position: 4651490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4651630:-1
position: 4651630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4646314-4650490:-1:exon

position:4650490:-1
position: 4650490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TRIM2
product: tripartite motif containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 71 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_019977428.1
SIO_010081: TRIM2
subclass of: SO_0000673
so part of: TRIM2
location: complement(join(4646314..4650490,4651490..4651630,4656124..4656194,4657252..4657420,4669740..4669907,4670411..4670514,4683361..4684084,4685163..4685343,4686511..4686662,4699728..4699965,4704905..4705089,4774085..4774216))
location: region:4646314-4774216:-1
so has part: feature:4774085-4774216:-1:exon
so has part: feature:4704905-4705089:-1:exon
so has part: feature:4699728-4699965:-1:exon
so has part: feature:4686511-4686662:-1:exon
so has part: feature:4685163-4685343:-1:exon
so has part: feature:4683361-4684084:-1:exon
so has part: feature:4670411-4670514:-1:exon
so has part: feature:4669740-4669907:-1:exon
so has part: feature:4657252-4657420:-1:exon
so has part: feature:4656124-4656194:-1:exon
so has part: feature:4651490-4651630:-1:exon
so has part: feature:4646314-4650490:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4774085-4774216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4704905-4705089:-1:exon

position:4705089:-1
position: 4705089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4699728-4699965:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4686511-4686662:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4685163-4685343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4683361-4684084:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4670411-4670514:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4669740-4669907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4657252-4657420:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4656124-4656194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4651490-4651630:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4646314-4650490:-1:exon

TRIM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TRIM2
product: tripartite motif containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 70 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_019977431.1
SIO_010081: TRIM2
subclass of: SO_0000673
so part of: TRIM2
location: complement(join(4646314..4650490,4651490..4651630,4656124..4656194,4657252..4657420,4669740..4669907,4670411..4670514,4683361..4684084,4685163..4685343,4686511..4686662,4699728..4699965,4774085..4774199))
location: region:4646314-4774199:-1
so has part: feature:4774085-4774199:-1:exon
so has part: feature:4699728-4699965:-1:exon
so has part: feature:4686511-4686662:-1:exon
so has part: feature:4685163-4685343:-1:exon
so has part: feature:4683361-4684084:-1:exon
so has part: feature:4670411-4670514:-1:exon
so has part: feature:4669740-4669907:-1:exon
so has part: feature:4657252-4657420:-1:exon
so has part: feature:4656124-4656194:-1:exon
so has part: feature:4651490-4651630:-1:exon
so has part: feature:4646314-4650490:-1:exon

position:4774199:-1
position: 4774199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4774085-4774199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4699728-4699965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4686511-4686662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4685163-4685343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4683361-4684084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4670411-4670514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4669740-4669907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4657252-4657420:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4656124-4656194:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4651490-4651630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4646314-4650490:-1:exon

TRIM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TRIM2
product: tripartite motif containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 71 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_019977430.1
SIO_010081: TRIM2
subclass of: SO_0000673
so part of: TRIM2
location: complement(join(4646314..4650490,4651490..4651630,4656124..4656194,4657252..4657420,4669740..4669907,4670411..4670514,4683361..4684084,4685163..4685343,4686511..4686662,4699728..4699965,4704905..4705089,4712022..4712178))
location: region:4646314-4712178:-1
so has part: feature:4712022-4712178:-1:exon
so has part: feature:4704905-4705089:-1:exon
so has part: feature:4699728-4699965:-1:exon
so has part: feature:4686511-4686662:-1:exon
so has part: feature:4685163-4685343:-1:exon
so has part: feature:4683361-4684084:-1:exon
so has part: feature:4670411-4670514:-1:exon
so has part: feature:4669740-4669907:-1:exon
so has part: feature:4657252-4657420:-1:exon
so has part: feature:4656124-4656194:-1:exon
so has part: feature:4651490-4651630:-1:exon
so has part: feature:4646314-4650490:-1:exon

position:4712178:-1
position: 4712178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4712022-4712178:-1:exon

position:4712022:-1
position: 4712022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4704905-4705089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4699728-4699965:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4686511-4686662:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4685163-4685343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4683361-4684084:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4670411-4670514:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4669740-4669907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4657252-4657420:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4656124-4656194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4651490-4651630:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4646314-4650490:-1:exon

TRIM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TRIM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 2 isoform X2
translation: MHRRGGYGIPQRAGSKTAGPPCQWSRMASEATNIPSPVVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNFFITNLMDVLQRSPGSSAEESSILETVTAVAAGKPLSCPNHDGNVMDFYCQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLDAANRRLPEIDSALQFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQSQLDTLLEGQESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNELADQDFPLHPRENDQLDFIVETEGLKKSIHNLGTILTTNAVASETVATGEGLRQTIIGQPMSVTITTKDKDGELCKTGNAYLTAELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADVSPTTEGVKRRVKSPGSGHVKQKAVKRPASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ
SIO_010081: TRIM2
subclass of: SO_0000673
so part of: TRIM2
location: complement(join(4650338..4650490,4651490..4651630,4656124..4656194,4657252..4657420,4669740..4669907,4670411..4670514,4683361..4684084,4685163..4685343,4686511..4686662,4699728..4699965,4704905..4705086,4774085..4774114))
location: region:4650338-4774114:-1
so has part: feature:4774085-4774114:-1:exon
so has part: feature:4704905-4705086:-1:exon
so has part: feature:4699728-4699965:-1:exon
so has part: feature:4686511-4686662:-1:exon
so has part: feature:4685163-4685343:-1:exon
so has part: feature:4683361-4684084:-1:exon
so has part: feature:4670411-4670514:-1:exon
so has part: feature:4669740-4669907:-1:exon
so has part: feature:4657252-4657420:-1:exon
so has part: feature:4656124-4656194:-1:exon
so has part: feature:4651490-4651630:-1:exon
so has part: feature:4650338-4650490:-1:exon

XP_019832988.1
type: Protein
SIO_000068: ncbiprotein

position:4650338:-1
position: 4650338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4774114:-1
position: 4774114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4774085-4774114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4704905-4705086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4699728-4699965:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4686511-4686662:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4685163-4685343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4683361-4684084:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4670411-4670514:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4669740-4669907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4657252-4657420:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4656124-4656194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4651490-4651630:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4650338-4650490:-1:exon

TRIM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TRIM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 2 isoform X1
translation: MHRRGGYGIPQQRAGSKTAGPPCQWSRMASEATNIPSPVVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNFFITNLMDVLQRSPGSSAEESSILETVTAVAAGKPLSCPNHDGNVMDFYCQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLDAANRRLPEIDSALQFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQSQLDTLLEGQESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNELADQDFPLHPRENDQLDFIVETEGLKKSIHNLGTILTTNAVASETVATGEGLRQTIIGQPMSVTITTKDKDGELCKTGNAYLTAELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADVSPTTEGVKRRVKSPGSGHVKQKAVKRPASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ
SIO_010081: TRIM2
subclass of: SO_0000673
so part of: TRIM2
location: complement(join(4650338..4650490,4651490..4651630,4656124..4656194,4657252..4657420,4669740..4669907,4670411..4670514,4683361..4684084,4685163..4685343,4686511..4686662,4699728..4699965,4704905..4705089,4774085..4774114))
location: region:4650338-4774114:-1
so has part: feature:4774085-4774114:-1:exon
so has part: feature:4704905-4705089:-1:exon
so has part: feature:4699728-4699965:-1:exon
so has part: feature:4686511-4686662:-1:exon
so has part: feature:4685163-4685343:-1:exon
so has part: feature:4683361-4684084:-1:exon
so has part: feature:4670411-4670514:-1:exon
so has part: feature:4669740-4669907:-1:exon
so has part: feature:4657252-4657420:-1:exon
so has part: feature:4656124-4656194:-1:exon
so has part: feature:4651490-4651630:-1:exon
so has part: feature:4650338-4650490:-1:exon

XP_019832987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4774085-4774114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4704905-4705089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4699728-4699965:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4686511-4686662:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4685163-4685343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4683361-4684084:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4670411-4670514:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4669740-4669907:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4657252-4657420:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4656124-4656194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4651490-4651630:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4650338-4650490:-1:exon

TRIM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TRIM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 2 isoform X4
translation: MEYRCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNFFITNLMDVLQRSPGSSAEESSILETVTAVAAGKPLSCPNHDGNVMDFYCQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLDAANRRLPEIDSALQFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQSQLDTLLEGQESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNELADQDFPLHPRENDQLDFIVETEGLKKSIHNLGTILTTNAVASETVATGEGLRQTIIGQPMSVTITTKDKDGELCKTGNAYLTAELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADVSPTTEGVKRRVKSPGSGHVKQKAVKRPASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ
SIO_010081: TRIM2
subclass of: SO_0000673
so part of: TRIM2
location: complement(join(4650338..4650490,4651490..4651630,4656124..4656194,4657252..4657420,4669740..4669907,4670411..4670514,4683361..4684084,4685163..4685343,4686511..4686662,4699728..4699965,4774085..4774095))
location: region:4650338-4774095:-1
so has part: feature:4774085-4774095:-1:exon
so has part: feature:4699728-4699965:-1:exon
so has part: feature:4686511-4686662:-1:exon
so has part: feature:4685163-4685343:-1:exon
so has part: feature:4683361-4684084:-1:exon
so has part: feature:4670411-4670514:-1:exon
so has part: feature:4669740-4669907:-1:exon
so has part: feature:4657252-4657420:-1:exon
so has part: feature:4656124-4656194:-1:exon
so has part: feature:4651490-4651630:-1:exon
so has part: feature:4650338-4650490:-1:exon

XP_019832990.1
type: Protein
SIO_000068: ncbiprotein

position:4774095:-1
position: 4774095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4774085-4774095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4699728-4699965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4686511-4686662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4685163-4685343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4683361-4684084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4670411-4670514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4669740-4669907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4657252-4657420:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4656124-4656194:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4651490-4651630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4650338-4650490:-1:exon

TRIM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TRIM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 2 isoform X3
translation: MASEATNIPSPVVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNFFITNLMDVLQRSPGSSAEESSILETVTAVAAGKPLSCPNHDGNVMDFYCQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLDAANRRLPEIDSALQFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQSQLDTLLEGQESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNELADQDFPLHPRENDQLDFIVETEGLKKSIHNLGTILTTNAVASETVATGEGLRQTIIGQPMSVTITTKDKDGELCKTGNAYLTAELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADVSPTTEGVKRRVKSPGSGHVKQKAVKRPASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ
SIO_010081: TRIM2
subclass of: SO_0000673
so part of: TRIM2
location: complement(join(4650338..4650490,4651490..4651630,4656124..4656194,4657252..4657420,4669740..4669907,4670411..4670514,4683361..4684084,4685163..4685343,4686511..4686662,4699728..4699965,4704905..4705038))
location: region:4650338-4705038:-1
so has part: feature:4704905-4705038:-1:exon
so has part: feature:4699728-4699965:-1:exon
so has part: feature:4686511-4686662:-1:exon
so has part: feature:4685163-4685343:-1:exon
so has part: feature:4683361-4684084:-1:exon
so has part: feature:4670411-4670514:-1:exon
so has part: feature:4669740-4669907:-1:exon
so has part: feature:4657252-4657420:-1:exon
so has part: feature:4656124-4656194:-1:exon
so has part: feature:4651490-4651630:-1:exon
so has part: feature:4650338-4650490:-1:exon

XP_019832989.1
type: Protein
SIO_000068: ncbiprotein

position:4705038:-1
position: 4705038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4704905-4705038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4699728-4699965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4686511-4686662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4685163-4685343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4683361-4684084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4670411-4670514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4669740-4669907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4657252-4657420:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4656124-4656194:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4651490-4651630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4650338-4650490:-1:exon

LOC109571174
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4683547..4701508
location: region:4683547-4701508:1
so has part: feature:4683547-4701508:1:exon
subclass of: SO_0000011

109571174
type: Gene
SIO_000068: ncbigene

position:4683547:1
position: 4683547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4701508:1
position: 4701508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4683547-4701508:1:exon

LOC109571174
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109571174
product: uncharacterized LOC109571174
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XR_002182616.1
SIO_010081: LOC109571174
subclass of: SO_0000673
so part of: LOC109571174
location: join(4683547..4683697,4697451..4697656,4699631..4699844,4701366..4701508)
location: region:4683547-4701508:1
so has part: feature:4683547-4683697:1:exon
so has part: feature:4697451-4697656:1:exon
so has part: feature:4699631-4699844:1:exon
so has part: feature:4701366-4701508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4683547-4683697:1:exon

position:4683697:1
position: 4683697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4697451-4697656:1:exon

position:4697451:1
position: 4697451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4697656:1
position: 4697656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4699631-4699844:1:exon

position:4699631:1
position: 4699631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4699844:1
position: 4699844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4701366-4701508:1:exon

position:4701366:1
position: 4701366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109571274
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5017436..5019693)
location: region:5017436-5019693:-1
so has part: feature:5017436-5019693:-1:exon
subclass of: SO_0000011

109571274
type: Gene
SIO_000068: ncbigene

position:5017436:-1
position: 5017436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5019693:-1
position: 5019693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5017436-5019693:-1:exon

LOC109571274
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109571274
product: uncharacterized LOC109571274
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_002182633.1
SIO_010081: LOC109571274
subclass of: SO_0000673
so part of: LOC109571274
location: complement(join(5017436..5019506,5019605..5019693))
location: region:5017436-5019693:-1
so has part: feature:5019605-5019693:-1:exon
so has part: feature:5017436-5019506:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5019605-5019693:-1:exon

position:5019605:-1
position: 5019605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5017436-5019506:-1:exon

position:5019506:-1
position: 5019506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FHDC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: FHDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<5019738..5055371)
location: region:5019738-5055371:-1
so has part: feature:5019738-5055371:-1:exon
subclass of: SO_0000010

109570854
type: Gene
SIO_000068: ncbigene

position:5019738:-1
position: 5019738
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:5055371:-1
position: 5055371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5019738-5055371:-1:exon

FHDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FHDC1
product: FH2 domain containing 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019976998.1
SIO_010081: FHDC1
subclass of: SO_0000673
so part of: FHDC1
location: complement(join(<5019738..5020181,5021296..5022030,5024360..5024524,5027984..5028101,5030167..5030237,5031978..5032085,5032191..5032261,5035111..5035211,5035298..5035383,5040575..5040673,5041326..5041387,5051466..5051780,5051860..5052024,5055162..5055371))
location: region:5019738-5055371:-1
so has part: feature:5055162-5055371:-1:exon
so has part: feature:5051860-5052024:-1:exon
so has part: feature:5051466-5051780:-1:exon
so has part: feature:5041326-5041387:-1:exon
so has part: feature:5040575-5040673:-1:exon
so has part: feature:5035298-5035383:-1:exon
so has part: feature:5035111-5035211:-1:exon
so has part: feature:5032191-5032261:-1:exon
so has part: feature:5031978-5032085:-1:exon
so has part: feature:5030167-5030237:-1:exon
so has part: feature:5027984-5028101:-1:exon
so has part: feature:5024360-5024524:-1:exon
so has part: feature:5021296-5022030:-1:exon
so has part: feature:5019738-5020181:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5055162-5055371:-1:exon

position:5055162:-1
position: 5055162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5051860-5052024:-1:exon

position:5051860:-1
position: 5051860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5052024:-1
position: 5052024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5051466-5051780:-1:exon

position:5051466:-1
position: 5051466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5051780:-1
position: 5051780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5041326-5041387:-1:exon

position:5041326:-1
position: 5041326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5041387:-1
position: 5041387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5040575-5040673:-1:exon

position:5040575:-1
position: 5040575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5040673:-1
position: 5040673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5035298-5035383:-1:exon

position:5035298:-1
position: 5035298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5035383:-1
position: 5035383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5035111-5035211:-1:exon

position:5035111:-1
position: 5035111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5035211:-1
position: 5035211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5032191-5032261:-1:exon

position:5032191:-1
position: 5032191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5032261:-1
position: 5032261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5031978-5032085:-1:exon

position:5031978:-1
position: 5031978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5032085:-1
position: 5032085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5030167-5030237:-1:exon

position:5030167:-1
position: 5030167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5030237:-1
position: 5030237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5027984-5028101:-1:exon

position:5027984:-1
position: 5027984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5028101:-1
position: 5028101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5024360-5024524:-1:exon

position:5024360:-1
position: 5024360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5024524:-1
position: 5024524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5021296-5022030:-1:exon

position:5021296:-1
position: 5021296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5022030:-1
position: 5022030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5019738-5020181:-1:exon

position:5020181:-1
position: 5020181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FHDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FHDC1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(5040596..5040598),aa:OTHER)
product: LOW QUALITY PROTEIN: FH2 domain-containing protein 1
translation: MLNTSLSLFALGEIDETLDIFQIEPKAHSIVRKAAAHCVKQSASGLLRHLCSRRLGEYTFASSLRTSLNLVWXEDTPPRCLFSGGXLADGKAWHKFDGCVCFPKGQEIASLEGNGAMHVMNCVSLPPPPLPGGPPVPPPPPGLPPNSHLNGYSQLGKKKRMRSFYWKTIPEEQVRGKTNIWTLAASQQHHYQIDTKTVEELFGQQEDATMAPPSRRGGSLHSSSREAREEITLLDAKRSMNIGIFLKQFKKSPPSIVEDIHHGKSEHYGSETXRDFXALPESEEIKKLKTFSGDVAKLSLADSFLHCLIQVPNYSLRIEAMVLKKEFLPSCSSLYTDMTILRKATKELMSCEELHSILHLVLQAGNIMNAGGYAGNAVGFKLSSLLKLADTKANKPGMNLLHFVAQEAQKKDAVLLSFSEKLLHVQEAARLSLDNTEXELHSLFVRTKSLKENIZRDRELCQQMEDFLQFALEKLAELEQWKRELQDEAHTLIDFFCEDKDTVKLDECLQIFRDFCIRFNKAVKDNHDRQVQELRQRQRLKELEQKRRSWTAGEFGFGRSSSENDVELLTKRGAEDLPPFLCCRPASPSYRPPTTRRSRLSLDTMADRELLSFLERSTDGPEELKPSNSSQGCLWKVPPDGACREPGEPRGQDSSLAHRPRALEGQEEAPHSTTAWANWLPAAHPDDPACALRRPRRSGVSTLRKRNSAPVGLDPVRSSPPLSPLALGIREHELVTGLAQFDLQAPKGXEEPPQLTGNDCSPMELVSVGPPPLARRSSMRGTADASPARPTTAPAARPGREPPSPLRSSFRKPSAKPVRNVPRPKPEEDKACRSGAQGPDGPGEPPRAALAASVPRGPASVPSFARNTVASSSRSQRLDSPAPARAPGLTRTMSQRQLRVKGGPEGAAPKDSGALRR
SIO_010081: FHDC1
subclass of: SO_0000673
so part of: FHDC1
location: complement(join(<5019738..5020181,5021296..5022030,5024360..5024524,5027984..5028101,5030167..5030237,5031978..5032085,5032191..5032261,5035111..5035211,5035298..5035383,5040575..5040673,5041326..5041387,5051466..5051780,5051860..5052024,5055162..5055371))
location: region:5019738-5055371:-1
so has part: feature:5055162-5055371:-1:exon
so has part: feature:5051860-5052024:-1:exon
so has part: feature:5051466-5051780:-1:exon
so has part: feature:5041326-5041387:-1:exon
so has part: feature:5040575-5040673:-1:exon
so has part: feature:5035298-5035383:-1:exon
so has part: feature:5035111-5035211:-1:exon
so has part: feature:5032191-5032261:-1:exon
so has part: feature:5031978-5032085:-1:exon
so has part: feature:5030167-5030237:-1:exon
so has part: feature:5027984-5028101:-1:exon
so has part: feature:5024360-5024524:-1:exon
so has part: feature:5021296-5022030:-1:exon
so has part: feature:5019738-5020181:-1:exon

XP_019832557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5055162-5055371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5051860-5052024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5051466-5051780:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5041326-5041387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5040575-5040673:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5035298-5035383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5035111-5035211:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5032191-5032261:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5031978-5032085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5030167-5030237:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5027984-5028101:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5024360-5024524:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5021296-5022030:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5019738-5020181:-1:exon

ARFIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ARFIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5076572..>5131757)
location: region:5076572-5131757:-1
so has part: feature:5076572-5131757:-1:exon
subclass of: SO_0000010

109570855
type: Gene
SIO_000068: ncbigene

position:5076572:-1
position: 5076572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5131757:-1
position: 5131757
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5076572-5131757:-1:exon

ARFIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ARFIP1
product: ADP ribosylation factor interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 40 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 246 samples with support for all annotated introns
transcript id: XM_019976999.1
SIO_010081: ARFIP1
subclass of: SO_0000673
so part of: ARFIP1
location: complement(join(5076572..5078431,5107052..5107226,5118221..5118378,5124552..5124773,5131575..>5131757))
location: region:5076572-5131757:-1
so has part: feature:5131575-5131757:-1:exon
so has part: feature:5124552-5124773:-1:exon
so has part: feature:5118221-5118378:-1:exon
so has part: feature:5107052-5107226:-1:exon
so has part: feature:5076572-5078431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5131575-5131757:-1:exon

position:5131575:-1
position: 5131575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5124552-5124773:-1:exon

position:5124552:-1
position: 5124552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5124773:-1
position: 5124773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5118221-5118378:-1:exon

position:5118221:-1
position: 5118221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5118378:-1
position: 5118378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5107052-5107226:-1:exon

position:5107052:-1
position: 5107052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5107226:-1
position: 5107226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5076572-5078431:-1:exon

position:5078431:-1
position: 5078431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARFIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ARFIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arfaptin-1
translation: HQCFVFFLLVCVVCIFVFCSDVTGSQRTQTKSGPVILADETKNPAMEKLELVRKWSLNTYKCTRQIISEKLGRGSRTVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVLFHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLEEQ
SIO_010081: ARFIP1
subclass of: SO_0000673
so part of: ARFIP1
location: complement(join(5078276..5078431,5107052..5107226,5118221..5118378,5124552..5124773,5131575..>5131757))
location: region:5078276-5131757:-1
so has part: feature:5131575-5131757:-1:exon
so has part: feature:5124552-5124773:-1:exon
so has part: feature:5118221-5118378:-1:exon
so has part: feature:5107052-5107226:-1:exon
so has part: feature:5078276-5078431:-1:exon

XP_019832558.1
type: Protein
SIO_000068: ncbiprotein

position:5078276:-1
position: 5078276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5131575-5131757:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5124552-5124773:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5118221-5118378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5107052-5107226:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5078276-5078431:-1:exon

TIGD4
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TIGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5246640..5256494
location: region:5246640-5256494:1
so has part: feature:5246640-5256494:1:exon
subclass of: SO_0000010

109571273
type: Gene
SIO_000068: ncbigene

position:5246640:1
position: 5246640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5256494:1
position: 5256494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5246640-5256494:1:exon

TIGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TIGD4
product: tigger transposable element derived 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019977625.1
SIO_010081: TIGD4
subclass of: SO_0000673
so part of: TIGD4
location: join(5246640..5246886,5247188..5247430,5253937..5254156,5254320..5256494)
location: region:5246640-5256494:1
so has part: feature:5246640-5246886:1:exon
so has part: feature:5247188-5247430:1:exon
so has part: feature:5253937-5254156:1:exon
so has part: feature:5254320-5256494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5246640-5246886:1:exon

position:5246886:1
position: 5246886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5247188-5247430:1:exon

position:5247188:1
position: 5247188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5247430:1
position: 5247430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5253937-5254156:1:exon

position:5253937:1
position: 5253937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5254156:1
position: 5254156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5254320-5256494:1:exon

position:5254320:1
position: 5254320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TIGD4
product: tigger transposable element derived 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019977626.1
SIO_010081: TIGD4
subclass of: SO_0000673
so part of: TIGD4
location: join(5246640..5246886,5247188..5247430,5254066..5254156,5254320..5256494)
location: region:5246640-5256494:1
so has part: feature:5246640-5246886:1:exon
so has part: feature:5247188-5247430:1:exon
so has part: feature:5254066-5254156:1:exon
so has part: feature:5254320-5256494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5246640-5246886:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5247188-5247430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5254066-5254156:1:exon

position:5254066:1
position: 5254066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5254320-5256494:1:exon

TIGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TIGD4
product: tigger transposable element derived 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019977628.1
SIO_010081: TIGD4
subclass of: SO_0000673
so part of: TIGD4
location: join(5246640..5246886,5254066..5254156,5254320..5256494)
location: region:5246640-5256494:1
so has part: feature:5246640-5246886:1:exon
so has part: feature:5254066-5254156:1:exon
so has part: feature:5254320-5256494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5246640-5246886:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5254066-5254156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5254320-5256494:1:exon

TIGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TIGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tigger transposable element-derived protein 4
translation: MAEAPVDASTLPVTVKKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRYGLVFRAQPVEATGVSADPSAVWHQNILPYYLNDYHPKNVFNVKETGLLYRMLPTNTFAFKGETCSIGKLCKDRITLVVGTNMDGSEKLPLLLIGKNRNPRCFKGIKSLPVYYEANKMAWMTAEVFEQWMQKLDERFQAQQRRVVIFVESSPAHPEVKNLKSIELAFFPSCLSSKFIAMKQGVIRSLKIKYRHCLIKKFLSSVEGSKEFTFSLLDAVDILHLCWRAVTPETIVKSYEEAGFKSQRGESEEASAETDTGLDLVADAQAAGVEFPEGLSVEEYAALDDDLETCEAAPSGDAVCPKESESDETGFYTSDEEEDGGSLESELPLPSKNEAITALDTLKTFLRSQDINDELHNALADLEIFINSLSSK
SIO_010081: TIGD4
subclass of: SO_0000673
so part of: TIGD4
location: 5254853..5256391
location: region:5254853-5256391:1
so has part: feature:5254853-5256391:1:exon

XP_019833184.1
type: Protein
SIO_000068: ncbiprotein

position:5254853:1
position: 5254853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5256391:1
position: 5256391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5254853-5256391:1:exon

TIGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TIGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tigger transposable element-derived protein 4
translation: MAEAPVDASTLPVTVKKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRYGLVFRAQPVEATGVSADPSAVWHQNILPYYLNDYHPKNVFNVKETGLLYRMLPTNTFAFKGETCSIGKLCKDRITLVVGTNMDGSEKLPLLLIGKNRNPRCFKGIKSLPVYYEANKMAWMTAEVFEQWMQKLDERFQAQQRRVVIFVESSPAHPEVKNLKSIELAFFPSCLSSKFIAMKQGVIRSLKIKYRHCLIKKFLSSVEGSKEFTFSLLDAVDILHLCWRAVTPETIVKSYEEAGFKSQRGESEEASAETDTGLDLVADAQAAGVEFPEGLSVEEYAALDDDLETCEAAPSGDAVCPKESESDETGFYTSDEEEDGGSLESELPLPSKNEAITALDTLKTFLRSQDINDELHNALADLEIFINSLSSK
SIO_010081: TIGD4
subclass of: SO_0000673
so part of: TIGD4
location: 5254853..5256391
location: region:5254853-5256391:1
so has part: feature:5254853-5256391:1:exon

XP_019833185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5254853-5256391:1:exon

TIGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TIGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tigger transposable element-derived protein 4
translation: MAEAPVDASTLPVTVKKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRYGLVFRAQPVEATGVSADPSAVWHQNILPYYLNDYHPKNVFNVKETGLLYRMLPTNTFAFKGETCSIGKLCKDRITLVVGTNMDGSEKLPLLLIGKNRNPRCFKGIKSLPVYYEANKMAWMTAEVFEQWMQKLDERFQAQQRRVVIFVESSPAHPEVKNLKSIELAFFPSCLSSKFIAMKQGVIRSLKIKYRHCLIKKFLSSVEGSKEFTFSLLDAVDILHLCWRAVTPETIVKSYEEAGFKSQRGESEEASAETDTGLDLVADAQAAGVEFPEGLSVEEYAALDDDLETCEAAPSGDAVCPKESESDETGFYTSDEEEDGGSLESELPLPSKNEAITALDTLKTFLRSQDINDELHNALADLEIFINSLSSK
SIO_010081: TIGD4
subclass of: SO_0000673
so part of: TIGD4
location: 5254853..5256391
location: region:5254853-5256391:1
so has part: feature:5254853-5256391:1:exon

XP_019833187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5254853-5256391:1:exon

TMEM154
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TMEM154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5347248..5399436
location: region:5347248-5399436:1
so has part: feature:5347248-5399436:1:exon
subclass of: SO_0000010

109571503
type: Gene
SIO_000068: ncbigene

position:5347248:1
position: 5347248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5399436:1
position: 5399436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5347248-5399436:1:exon

TMEM154
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TMEM154
product: transmembrane protein 154
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_019978027.1
SIO_010081: TMEM154
subclass of: SO_0000673
so part of: TMEM154
location: join(5347248..5347628,5372053..5372310,5372399..5372437,5381082..5381109,5382274..5382359,5384352..5384412,5396877..5399436)
location: region:5347248-5399436:1
so has part: feature:5347248-5347628:1:exon
so has part: feature:5372053-5372310:1:exon
so has part: feature:5372399-5372437:1:exon
so has part: feature:5381082-5381109:1:exon
so has part: feature:5382274-5382359:1:exon
so has part: feature:5384352-5384412:1:exon
so has part: feature:5396877-5399436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5347248-5347628:1:exon

position:5347628:1
position: 5347628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5372053-5372310:1:exon

position:5372053:1
position: 5372053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5372310:1
position: 5372310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5372399-5372437:1:exon

position:5372399:1
position: 5372399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5372437:1
position: 5372437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5381082-5381109:1:exon

position:5381082:1
position: 5381082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5381109:1
position: 5381109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5382274-5382359:1:exon

position:5382274:1
position: 5382274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5382359:1
position: 5382359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5384352-5384412:1:exon

position:5384352:1
position: 5384352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5384412:1
position: 5384412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5396877-5399436:1:exon

position:5396877:1
position: 5396877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM154
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TMEM154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 154
translation: MPGRAPPEAPRAALLLAVVLAALATRPAQGEXDTELSGDALPGTGVLDEESEALSTLASVTTEPYITNINVTLIEEDTEHLEFILMVLIPVLLLSLLLLSAILLVIYHKRKRNKQEPSSQGSQSVLQTHELGSENVKVPIFEEDTPSVMEIEMEELDKWMNSMNRNADYECLPTLEEEKEPNLNNPSDNES
SIO_010081: TMEM154
subclass of: SO_0000673
so part of: TMEM154
location: join(5347541..5347628,5372053..5372310,5372399..5372437,5381082..5381109,5382274..5382359,5384352..5384412,5396877..5396892)
location: region:5347541-5396892:1
so has part: feature:5347541-5347628:1:exon
so has part: feature:5372053-5372310:1:exon
so has part: feature:5372399-5372437:1:exon
so has part: feature:5381082-5381109:1:exon
so has part: feature:5382274-5382359:1:exon
so has part: feature:5384352-5384412:1:exon
so has part: feature:5396877-5396892:1:exon

XP_019833586.1
type: Protein
SIO_000068: ncbiprotein

position:5347541:1
position: 5347541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5396892:1
position: 5396892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5347541-5347628:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5372053-5372310:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5372399-5372437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5381082-5381109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5382274-5382359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5384352-5384412:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5396877-5396892:1:exon

LOC109571232
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5424924..5428654)
location: region:5424924-5428654:-1
so has part: feature:5424924-5428654:-1:exon
subclass of: SO_0000010

109571232
type: Gene
SIO_000068: ncbigene

position:5424924:-1
position: 5424924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5428654:-1
position: 5428654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5424924-5428654:-1:exon

LOC109571232
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109571232
product: uncharacterized LOC109571232
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019977542.1
SIO_010081: LOC109571232
subclass of: SO_0000673
so part of: LOC109571232
location: complement(5424924..5428654)
location: region:5424924-5428654:-1
so has part: feature:5424924-5428654:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5424924-5428654:-1:exon

LOC109571232
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109571232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109571232
translation: MTLQGKRKSGSASGWVRLGPRTRCRCRRLYGRVRTEERKGRSRVEPKLPPELTPDPRAVERACSVAVSFRAGGDCSLGSKEEAQAARPCSGAHHPKVRHLAPNGPSESPAAREVILQLDLPHLLEGASAPPFPWCGATPAPDDAWSGRANV
SIO_010081: LOC109571232
subclass of: SO_0000673
so part of: LOC109571232
location: complement(5427835..5428290)
location: region:5427835-5428290:-1
so has part: feature:5427835-5428290:-1:exon

XP_019833101.1
type: Protein
SIO_000068: ncbiprotein

position:5427835:-1
position: 5427835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5428290:-1
position: 5428290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5427835-5428290:-1:exon

FBXW7
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: FBXW7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5429092..5813185
location: region:5429092-5813185:1
so has part: feature:5429092-5813185:1:exon
subclass of: SO_0000010

109571233
type: Gene
SIO_000068: ncbigene

position:5429092:1
position: 5429092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5813185:1
position: 5813185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5429092-5813185:1:exon

FBXW7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FBXW7
product: F-box and WD repeat domain containing 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 60 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_019977543.1
SIO_010081: FBXW7
subclass of: SO_0000673
so part of: FBXW7
location: join(5429092..5429558,5707918..5707967,5708607..5709173,5781127..5781209,5784196..5784337,5796239..5796373,5801388..5801511,5803334..5803470,5804441..5804554,5805858..5806039,5808028..5808253,5810030..5810240,5811283..5813185)
location: region:5429092-5813185:1
so has part: feature:5429092-5429558:1:exon
so has part: feature:5707918-5707967:1:exon
so has part: feature:5708607-5709173:1:exon
so has part: feature:5781127-5781209:1:exon
so has part: feature:5784196-5784337:1:exon
so has part: feature:5796239-5796373:1:exon
so has part: feature:5801388-5801511:1:exon
so has part: feature:5803334-5803470:1:exon
so has part: feature:5804441-5804554:1:exon
so has part: feature:5805858-5806039:1:exon
so has part: feature:5808028-5808253:1:exon
so has part: feature:5810030-5810240:1:exon
so has part: feature:5811283-5813185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5429092-5429558:1:exon

position:5429558:1
position: 5429558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5707918-5707967:1:exon

position:5707918:1
position: 5707918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5707967:1
position: 5707967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5708607-5709173:1:exon

position:5708607:1
position: 5708607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5709173:1
position: 5709173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5781127-5781209:1:exon

position:5781127:1
position: 5781127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5781209:1
position: 5781209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5784196-5784337:1:exon

position:5784196:1
position: 5784196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5784337:1
position: 5784337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5796239-5796373:1:exon

position:5796239:1
position: 5796239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5796373:1
position: 5796373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5801388-5801511:1:exon

position:5801388:1
position: 5801388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5801511:1
position: 5801511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5803334-5803470:1:exon

position:5803334:1
position: 5803334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5803470:1
position: 5803470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5804441-5804554:1:exon

position:5804441:1
position: 5804441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5804554:1
position: 5804554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5805858-5806039:1:exon

position:5805858:1
position: 5805858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5806039:1
position: 5806039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5808028-5808253:1:exon

position:5808028:1
position: 5808028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5808253:1
position: 5808253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5810030-5810240:1:exon

position:5810030:1
position: 5810030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5810240:1
position: 5810240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5811283-5813185:1:exon

position:5811283:1
position: 5811283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAY-GUA
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TRNAY-GUA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5514886..5514957
location: region:5514886-5514957:1
so has part: feature:5514886-5514957:1:exon
subclass of: SO_0000663

109571568
type: Gene
SIO_000068: ncbigene

position:5514886:1
position: 5514886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5514957:1
position: 5514957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5514886-5514957:1:exon

TRNAY-GUA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9915
gene: TRNAY-GUA
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5514919..5514921,aa:Tyr,seq:gta)
SIO_010081: TRNAY-GUA
subclass of: SO_0000673
so part of: TRNAY-GUA
location: 5514886..5514957
location: region:5514886-5514957:1
so has part: feature:5514886-5514957:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5514886-5514957:1:exon

FBXW7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FBXW7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 7 isoform X1
translation: MNQXLLSVGSKRRRTGGSLRGNPSSSQADEEQMNRVLEEEQQQPRHQEEEHAARNGEVVGAEPRPGDQNDPQQGQLEENNNRFISVDEDSSGNQEEQEEDEEHAGEQDEEDEEEEEMDQESDDFDQSDDSSREDEHTHRNSVTNSNSIVDLPIHQRSSPFYTKTTKMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSXTPTTFGDLRAANGQGQQRRRITSVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK
SIO_010081: FBXW7
subclass of: SO_0000673
so part of: FBXW7
location: join(5708676..5709173,5781127..5781209,5784196..5784337,5796239..5796373,5801388..5801511,5803334..5803470,5804441..5804554,5805858..5806039,5808028..5808253,5810030..5810240,5811283..5811551)
location: region:5708676-5811551:1
so has part: feature:5708676-5709173:1:exon
so has part: feature:5781127-5781209:1:exon
so has part: feature:5784196-5784337:1:exon
so has part: feature:5796239-5796373:1:exon
so has part: feature:5801388-5801511:1:exon
so has part: feature:5803334-5803470:1:exon
so has part: feature:5804441-5804554:1:exon
so has part: feature:5805858-5806039:1:exon
so has part: feature:5808028-5808253:1:exon
so has part: feature:5810030-5810240:1:exon
so has part: feature:5811283-5811551:1:exon

XP_019833102.1
type: Protein
SIO_000068: ncbiprotein

position:5708676:1
position: 5708676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5811551:1
position: 5811551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5708676-5709173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5781127-5781209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5784196-5784337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5796239-5796373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5801388-5801511:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5803334-5803470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5804441-5804554:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5805858-5806039:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5808028-5808253:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5810030-5810240:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5811283-5811551:1:exon

FBXW7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: FBXW7
product: F-box and WD repeat domain containing 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 68 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_019977544.1
SIO_010081: FBXW7
subclass of: SO_0000673
so part of: FBXW7
location: join(5778179..5778736,5781127..5781209,5784196..5784337,5796239..5796373,5801388..5801511,5803334..5803470,5804441..5804554,5805858..5806039,5808028..5808253,5810030..5810240,5811283..5813185)
location: region:5778179-5813185:1
so has part: feature:5778179-5778736:1:exon
so has part: feature:5781127-5781209:1:exon
so has part: feature:5784196-5784337:1:exon
so has part: feature:5796239-5796373:1:exon
so has part: feature:5801388-5801511:1:exon
so has part: feature:5803334-5803470:1:exon
so has part: feature:5804441-5804554:1:exon
so has part: feature:5805858-5806039:1:exon
so has part: feature:5808028-5808253:1:exon
so has part: feature:5810030-5810240:1:exon
so has part: feature:5811283-5813185:1:exon

position:5778179:1
position: 5778179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5778179-5778736:1:exon

position:5778736:1
position: 5778736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5781127-5781209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5784196-5784337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5796239-5796373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5801388-5801511:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5803334-5803470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5804441-5804554:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5805858-5806039:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5808028-5808253:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5810030-5810240:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5811283-5813185:1:exon

FBXW7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: FBXW7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 7 isoform X2
translation: MCVPRSGLILSCICLYCGVLLPVLLPNLPFLTCLSMSTLESVTYLPEKGLYCQRLPSSRTHGGTESLKGKNPENMGFYGTLKMIFYKMKRKLDHGSEVRSFSLGKKPCKVSEYTSTTGLVPCSXTPTTFGDLRAANGQGQQRRRITSVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK
SIO_010081: FBXW7
subclass of: SO_0000673
so part of: FBXW7
location: join(5778476..5778736,5781127..5781209,5784196..5784337,5796239..5796373,5801388..5801511,5803334..5803470,5804441..5804554,5805858..5806039,5808028..5808253,5810030..5810240,5811283..5811551)
location: region:5778476-5811551:1
so has part: feature:5778476-5778736:1:exon
so has part: feature:5781127-5781209:1:exon
so has part: feature:5784196-5784337:1:exon
so has part: feature:5796239-5796373:1:exon
so has part: feature:5801388-5801511:1:exon
so has part: feature:5803334-5803470:1:exon
so has part: feature:5804441-5804554:1:exon
so has part: feature:5805858-5806039:1:exon
so has part: feature:5808028-5808253:1:exon
so has part: feature:5810030-5810240:1:exon
so has part: feature:5811283-5811551:1:exon

XP_019833103.1
type: Protein
SIO_000068: ncbiprotein

position:5778476:1
position: 5778476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5778476-5778736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5781127-5781209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5784196-5784337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5796239-5796373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5801388-5801511:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5803334-5803470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5804441-5804554:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5805858-5806039:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5808028-5808253:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5810030-5810240:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5811283-5811551:1:exon

LOC109570856
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109570856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6432915..6433712)
location: region:6432915-6433712:-1
so has part: feature:6432915-6433712:-1:exon

109570856
type: Gene
SIO_000068: ncbigene

position:6432915:-1
position: 6432915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6433712:-1
position: 6433712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6432915-6433712:-1:exon

LOC109570856
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109570856
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109570856
subclass of: SO_0000673
so part of: LOC109570856
location: complement(6432915..6433712)
location: region:6432915-6433712:-1
so has part: feature:6432915-6433712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6432915-6433712:-1:exon

GATB
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: GATB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6495081..6597589
location: region:6495081-6597589:1
so has part: feature:6495081-6597589:1:exon
subclass of: SO_0000010

109571100
type: Gene
SIO_000068: ncbigene

position:6495081:1
position: 6495081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6597589:1
position: 6597589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6495081-6597589:1:exon

GATB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: GATB
product: glutamyl-tRNA amidotransferase subunit B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 252 samples with support for all annotated introns
transcript id: XM_019977308.1
SIO_010081: GATB
subclass of: SO_0000673
so part of: GATB
location: join(6495081..6495294,6497610..6497760,6539787..6539900,6542205..6542403,6543024..6543146,6556210..6556323,6559858..6559942,6560932..6560976,6563215..6563404,6577502..6577635,6583639..6583717,6593965..6594099,6595361..6597589)
location: region:6495081-6597589:1
so has part: feature:6495081-6495294:1:exon
so has part: feature:6497610-6497760:1:exon
so has part: feature:6539787-6539900:1:exon
so has part: feature:6542205-6542403:1:exon
so has part: feature:6543024-6543146:1:exon
so has part: feature:6556210-6556323:1:exon
so has part: feature:6559858-6559942:1:exon
so has part: feature:6560932-6560976:1:exon
so has part: feature:6563215-6563404:1:exon
so has part: feature:6577502-6577635:1:exon
so has part: feature:6583639-6583717:1:exon
so has part: feature:6593965-6594099:1:exon
so has part: feature:6595361-6597589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6495081-6495294:1:exon

position:6495294:1
position: 6495294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6497610-6497760:1:exon

position:6497610:1
position: 6497610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6497760:1
position: 6497760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6539787-6539900:1:exon

position:6539787:1
position: 6539787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6539900:1
position: 6539900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6542205-6542403:1:exon

position:6542205:1
position: 6542205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6542403:1
position: 6542403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6543024-6543146:1:exon

position:6543024:1
position: 6543024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6543146:1
position: 6543146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6556210-6556323:1:exon

position:6556210:1
position: 6556210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6556323:1
position: 6556323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6559858-6559942:1:exon

position:6559858:1
position: 6559858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6559942:1
position: 6559942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6560932-6560976:1:exon

position:6560932:1
position: 6560932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6560976:1
position: 6560976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6563215-6563404:1:exon

position:6563215:1
position: 6563215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6563404:1
position: 6563404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6577502-6577635:1:exon

position:6577502:1
position: 6577502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6577635:1
position: 6577635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6583639-6583717:1:exon

position:6583639:1
position: 6583639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6583717:1
position: 6583717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6593965-6594099:1:exon

position:6593965:1
position: 6593965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6594099:1
position: 6594099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6595361-6597589:1:exon

position:6595361:1
position: 6595361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GATB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: GATB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial
translation: MAAPMLRWCCXGRRFAFARVGCGSCHRRGPPTGSTSNGKRGQSSVAQQPHITAQKPRKGEPEWAAVVGLEIHAQIASNSKLFSGSQVCFAAPPNSLVSFFDASLPGTLPVLNRRCVEAAVMTGLALDCHINRKSLFDRKHYFYADLPAGYQITQQRLPIAVNGSLAYSVYVGRKPSQMVTRTVRVKQIQLEQDSGKSLHDDLRSQTLIDLNRAGIGLLELVLEPDMSCGEEAATAVRELQLILQALGTSQANMAEGQLRVDANISVHRPGEPLGIRTEVKNLNSARFLAKAIDYEIQRQINELENGGEILNETRSFDFKLGCTVPMRDKEGKQDYRFMPEPNLPPLLLYDSGSLPSGADPQQVINIDQLRERLPELPRVTRQRLVQQYGMLPEHSCVLLNEVGLLEFFQNVIKETRAEPKKVTSWVLNTFLGFLKQQNLAVSESPVTPSALAELLDLLDRKAISAPAAKQVFEELWRNEGKTPAQIVAEKKLELLQDPEALEQLCRSTLEAHPDVVMDLKRGNPRAINKLIGLVRKATLGRADPTAIKEVLERQLSS
SIO_010081: GATB
subclass of: SO_0000673
so part of: GATB
location: join(6495119..6495294,6497610..6497760,6539787..6539900,6542205..6542403,6543024..6543146,6556210..6556323,6559858..6559942,6560932..6560976,6563215..6563404,6577502..6577635,6583639..6583717,6593965..6594099,6595361..6595489)
location: region:6495119-6595489:1
so has part: feature:6495119-6495294:1:exon
so has part: feature:6497610-6497760:1:exon
so has part: feature:6539787-6539900:1:exon
so has part: feature:6542205-6542403:1:exon
so has part: feature:6543024-6543146:1:exon
so has part: feature:6556210-6556323:1:exon
so has part: feature:6559858-6559942:1:exon
so has part: feature:6560932-6560976:1:exon
so has part: feature:6563215-6563404:1:exon
so has part: feature:6577502-6577635:1:exon
so has part: feature:6583639-6583717:1:exon
so has part: feature:6593965-6594099:1:exon
so has part: feature:6595361-6595489:1:exon

XP_019832867.1
type: Protein
SIO_000068: ncbiprotein

position:6495119:1
position: 6495119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6595489:1
position: 6595489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6495119-6495294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6497610-6497760:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6539787-6539900:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6542205-6542403:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6543024-6543146:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6556210-6556323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6559858-6559942:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6560932-6560976:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6563215-6563404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6577502-6577635:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6583639-6583717:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6593965-6594099:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6595361-6595489:1:exon

LOC109571101
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6602684..6642523)
location: region:6602684-6642523:-1
so has part: feature:6602684-6642523:-1:exon
subclass of: SO_0000010

109571101
type: Gene
SIO_000068: ncbigene

position:6602684:-1
position: 6602684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6642523:-1
position: 6642523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6602684-6642523:-1:exon

LOC109571101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109571101
product: protein FAM160A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 239 samples with support for all annotated introns
transcript id: XM_019977309.1
SIO_010081: LOC109571101
subclass of: SO_0000673
so part of: LOC109571101
location: complement(join(6602684..6603887,6609111..6609249,6609686..6609864,6619516..6620649,6622341..6622531,6635957..6636036,6642390..6642523))
location: region:6602684-6642523:-1
so has part: feature:6642390-6642523:-1:exon
so has part: feature:6635957-6636036:-1:exon
so has part: feature:6622341-6622531:-1:exon
so has part: feature:6619516-6620649:-1:exon
so has part: feature:6609686-6609864:-1:exon
so has part: feature:6609111-6609249:-1:exon
so has part: feature:6602684-6603887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6642390-6642523:-1:exon

position:6642390:-1
position: 6642390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6635957-6636036:-1:exon

position:6635957:-1
position: 6635957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6636036:-1
position: 6636036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6622341-6622531:-1:exon

position:6622341:-1
position: 6622341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6622531:-1
position: 6622531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6619516-6620649:-1:exon

position:6619516:-1
position: 6619516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6620649:-1
position: 6620649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6609686-6609864:-1:exon

position:6609686:-1
position: 6609686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6609864:-1
position: 6609864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6609111-6609249:-1:exon

position:6609111:-1
position: 6609111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6609249:-1
position: 6609249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6602684-6603887:-1:exon

position:6603887:-1
position: 6603887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109571101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109571101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM160A1-like
translation: MLQLILRYLIPCNHMMLSQRWAVKERDCYSVSAAKLLALTPVCCSSGITLTLGNQERDYILWSQCRRDSPGPAEQLLPEASPPSACIVEYGKALDISYLQYLWEAHSNILRCMRDCRVWSALYDGDSPNPEACCLGPPEERAPGATSPVLRLPQQVPGTPXPPLAPGKEKSHTELEWDDSYDTGISSGTGGCSPXXYEDAENASPPVPVDPPKHIQEMKKNAILLFKGAYIEESDFQDDVMVYRLCAEKDAEDVHGSQEHSXRPPAQTQVQGAPLNNGPLPGPEPETESEEENGRDDSAXLHGVSRDPARANEPEVTPEAXPESAAPSPKAEPSAQPTXXVPEGEDFMAQYDQIIKELGSSTEGLMEQDLSLPDALLVTKEPEGEKXESQGGEEEEGKKDPEEEDDDDFDSFIAEAPPAETPPSPFGARDDXAFASHRPARTQSTPFTGPFISVVLSKLENMLENSLHVNLLLIGIITQLASYPQPLLRSFLLNTNMVFQPSVRSLYQVLASVKNKIEQFASVERDFPGLLIQAQQYLLFRVDLSDPSPETPTKDPVQDTSRTGSGKNFLDGPPKVLQPFLTNRAKVVGAPPSLPPPVXXTMLAAALFPEFLKELAALAQEHSILCCRILGDPDDACW
SIO_010081: LOC109571101
subclass of: SO_0000673
so part of: LOC109571101
location: complement(join(6603634..6603887,6609111..6609249,6609686..6609864,6619516..6620649,6622341..6622531,6635957..6635976))
location: region:6603634-6635976:-1
so has part: feature:6635957-6635976:-1:exon
so has part: feature:6622341-6622531:-1:exon
so has part: feature:6619516-6620649:-1:exon
so has part: feature:6609686-6609864:-1:exon
so has part: feature:6609111-6609249:-1:exon
so has part: feature:6603634-6603887:-1:exon

XP_019832868.1
type: Protein
SIO_000068: ncbiprotein

position:6603634:-1
position: 6603634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6635976:-1
position: 6635976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6635957-6635976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6622341-6622531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6619516-6620649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6609686-6609864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6609111-6609249:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6603634-6603887:-1:exon

LOC109571102
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6684004..6912481)
location: region:6684004-6912481:-1
so has part: feature:6684004-6912481:-1:exon
subclass of: SO_0000010

109571102
type: Gene
SIO_000068: ncbigene

position:6684004:-1
position: 6684004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6912481:-1
position: 6912481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6684004-6912481:-1:exon

LOC109571102
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109571102
product: protein FAM160A1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_019977313.1
SIO_010081: LOC109571102
subclass of: SO_0000673
so part of: LOC109571102
location: complement(join(6684004..6684153,6686286..6686444,6702507..6703133,6723872..6724104,6912133..6912481))
location: region:6684004-6912481:-1
so has part: feature:6912133-6912481:-1:exon
so has part: feature:6723872-6724104:-1:exon
so has part: feature:6702507-6703133:-1:exon
so has part: feature:6686286-6686444:-1:exon
so has part: feature:6684004-6684153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6912133-6912481:-1:exon

position:6912133:-1
position: 6912133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6723872-6724104:-1:exon

position:6723872:-1
position: 6723872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6724104:-1
position: 6724104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6702507-6703133:-1:exon

position:6702507:-1
position: 6702507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6703133:-1
position: 6703133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6686286-6686444:-1:exon

position:6686286:-1
position: 6686286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6686444:-1
position: 6686444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6684004-6684153:-1:exon

position:6684153:-1
position: 6684153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109571102
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109571102
product: protein FAM160A1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_019977312.1
SIO_010081: LOC109571102
subclass of: SO_0000673
so part of: LOC109571102
location: complement(join(6684004..6684153,6686286..6686444,6702507..6703133,6723872..6724104,6829415..6829507,6912133..6912481))
location: region:6684004-6912481:-1
so has part: feature:6912133-6912481:-1:exon
so has part: feature:6829415-6829507:-1:exon
so has part: feature:6723872-6724104:-1:exon
so has part: feature:6702507-6703133:-1:exon
so has part: feature:6686286-6686444:-1:exon
so has part: feature:6684004-6684153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6912133-6912481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6829415-6829507:-1:exon

position:6829415:-1
position: 6829415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6829507:-1
position: 6829507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6723872-6724104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6702507-6703133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6686286-6686444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6684004-6684153:-1:exon

LOC109571102
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109571102
product: protein FAM160A1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 130 samples with support for all annotated introns
transcript id: XM_019977311.1
SIO_010081: LOC109571102
subclass of: SO_0000673
so part of: LOC109571102
location: complement(join(6684004..6684153,6686286..6686444,6702507..6703133,6723872..6724104,6829415..6829510,6912133..6912481))
location: region:6684004-6912481:-1
so has part: feature:6912133-6912481:-1:exon
so has part: feature:6829415-6829510:-1:exon
so has part: feature:6723872-6724104:-1:exon
so has part: feature:6702507-6703133:-1:exon
so has part: feature:6686286-6686444:-1:exon
so has part: feature:6684004-6684153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6912133-6912481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6829415-6829510:-1:exon

position:6829510:-1
position: 6829510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6723872-6724104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6702507-6703133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6686286-6686444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6684004-6684153:-1:exon

LOC109571102
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109571102
product: protein FAM160A1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 144 samples with support for all annotated introns
transcript id: XM_019977310.1
SIO_010081: LOC109571102
subclass of: SO_0000673
so part of: LOC109571102
location: complement(join(6684004..6684153,6686286..6686444,6702507..6703133,6723872..6724104,6829415..6829554,6912133..6912481))
location: region:6684004-6912481:-1
so has part: feature:6912133-6912481:-1:exon
so has part: feature:6829415-6829554:-1:exon
so has part: feature:6723872-6724104:-1:exon
so has part: feature:6702507-6703133:-1:exon
so has part: feature:6686286-6686444:-1:exon
so has part: feature:6684004-6684153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6912133-6912481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6829415-6829554:-1:exon

position:6829554:-1
position: 6829554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6723872-6724104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6702507-6703133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6686286-6686444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6684004-6684153:-1:exon

LOC109571102
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109571102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM160A1-like
translation: MMSSVATESKIQRAVSLQGVDPETCMIVFKNHWAQVVKILEKHDPLKNTQAKYGSIPPDEASAVQNYVEHMLFLLIEEQARDAAMGPILEFVVSENIMEKLFLWSLRREFTDETKMEQLKMYEMLITQSHQPLLHHKPILKPLMMLLSSCSGTTTPTVEGKLVVLLNQLCSILAKDPSILELFFHTSEDQGAANFLIFSLLIPFIHREGTVGQQARDALLFIMSLSAENSVVAHHIVENTYFCPVLATGLSGLYSSLPTKLEEKGEGWHCLLRDDWLLLPPLVQFMNSLEFCNAVIQVAHPLIRNQLVNYIYNGFLVPVLAPALHKVSDWLMSSLVCFLYN
SIO_010081: LOC109571102
subclass of: SO_0000673
so part of: LOC109571102
location: complement(join(6684019..6684153,6686286..6686444,6702507..6703133,6723872..6723976))
location: region:6684019-6723976:-1
so has part: feature:6723872-6723976:-1:exon
so has part: feature:6702507-6703133:-1:exon
so has part: feature:6686286-6686444:-1:exon
so has part: feature:6684019-6684153:-1:exon

XP_019832869.1
type: Protein
SIO_000068: ncbiprotein

position:6684019:-1
position: 6684019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6723976:-1
position: 6723976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6723872-6723976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6702507-6703133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6686286-6686444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6684019-6684153:-1:exon

LOC109571102
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109571102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM160A1-like
translation: MMSSVATESKIQRAVSLQGVDPETCMIVFKNHWAQVVKILEKHDPLKNTQAKYGSIPPDEASAVQNYVEHMLFLLIEEQARDAAMGPILEFVVSENIMEKLFLWSLRREFTDETKMEQLKMYEMLITQSHQPLLHHKPILKPLMMLLSSCSGTTTPTVEGKLVVLLNQLCSILAKDPSILELFFHTSEDQGAANFLIFSLLIPFIHREGTVGQQARDALLFIMSLSAENSVVAHHIVENTYFCPVLATGLSGLYSSLPTKLEEKGEGWHCLLRDDWLLLPPLVQFMNSLEFCNAVIQVAHPLIRNQLVNYIYNGFLVPVLAPALHKVSDWLMSSLVCFLYN
SIO_010081: LOC109571102
subclass of: SO_0000673
so part of: LOC109571102
location: complement(join(6684019..6684153,6686286..6686444,6702507..6703133,6723872..6723976))
location: region:6684019-6723976:-1
so has part: feature:6723872-6723976:-1:exon
so has part: feature:6702507-6703133:-1:exon
so has part: feature:6686286-6686444:-1:exon
so has part: feature:6684019-6684153:-1:exon

XP_019832870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6723872-6723976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6702507-6703133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6686286-6686444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6684019-6684153:-1:exon

LOC109571102
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109571102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM160A1-like
translation: MMSSVATESKIQRAVSLQGVDPETCMIVFKNHWAQVVKILEKHDPLKNTQAKYGSIPPDEASAVQNYVEHMLFLLIEEQARDAAMGPILEFVVSENIMEKLFLWSLRREFTDETKMEQLKMYEMLITQSHQPLLHHKPILKPLMMLLSSCSGTTTPTVEGKLVVLLNQLCSILAKDPSILELFFHTSEDQGAANFLIFSLLIPFIHREGTVGQQARDALLFIMSLSAENSVVAHHIVENTYFCPVLATGLSGLYSSLPTKLEEKGEGWHCLLRDDWLLLPPLVQFMNSLEFCNAVIQVAHPLIRNQLVNYIYNGFLVPVLAPALHKVSDWLMSSLVCFLYN
SIO_010081: LOC109571102
subclass of: SO_0000673
so part of: LOC109571102
location: complement(join(6684019..6684153,6686286..6686444,6702507..6703133,6723872..6723976))
location: region:6684019-6723976:-1
so has part: feature:6723872-6723976:-1:exon
so has part: feature:6702507-6703133:-1:exon
so has part: feature:6686286-6686444:-1:exon
so has part: feature:6684019-6684153:-1:exon

XP_019832871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6723872-6723976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6702507-6703133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6686286-6686444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6684019-6684153:-1:exon

LOC109571102
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109571102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM160A1-like
translation: MMSSVATESKIQRAVSLQGVDPETCMIVFKNHWAQVVKILEKHDPLKNTQAKYGSIPPDEASAVQNYVEHMLFLLIEEQARDAAMGPILEFVVSENIMEKLFLWSLRREFTDETKMEQLKMYEMLITQSHQPLLHHKPILKPLMMLLSSCSGTTTPTVEGKLVVLLNQLCSILAKDPSILELFFHTSEDQGAANFLIFSLLIPFIHREGTVGQQARDALLFIMSLSAENSVVAHHIVENTYFCPVLATGLSGLYSSLPTKLEEKGEGWHCLLRDDWLLLPPLVQFMNSLEFCNAVIQVAHPLIRNQLVNYIYNGFLVPVLAPALHKVSDWLMSSLVCFLYN
SIO_010081: LOC109571102
subclass of: SO_0000673
so part of: LOC109571102
location: complement(join(6684019..6684153,6686286..6686444,6702507..6703133,6723872..6723976))
location: region:6684019-6723976:-1
so has part: feature:6723872-6723976:-1:exon
so has part: feature:6702507-6703133:-1:exon
so has part: feature:6686286-6686444:-1:exon
so has part: feature:6684019-6684153:-1:exon

XP_019832872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6723872-6723976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6702507-6703133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6686286-6686444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6684019-6684153:-1:exon

PRSS48
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PRSS48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7030371..7039046)
location: region:7030371-7039046:-1
so has part: feature:7030371-7039046:-1:exon
subclass of: SO_0000010

109571567
type: Gene
SIO_000068: ncbigene

position:7030371:-1
position: 7030371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7039046:-1
position: 7039046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7030371-7039046:-1:exon

PRSS48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PRSS48
product: protease, serine 48
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019978111.1
SIO_010081: PRSS48
subclass of: SO_0000673
so part of: PRSS48
location: complement(join(7030371..7031343,7033882..7034051,7035260..7035525,7037388..7037550,7037729..7037770,7038706..7039046))
location: region:7030371-7039046:-1
so has part: feature:7038706-7039046:-1:exon
so has part: feature:7037729-7037770:-1:exon
so has part: feature:7037388-7037550:-1:exon
so has part: feature:7035260-7035525:-1:exon
so has part: feature:7033882-7034051:-1:exon
so has part: feature:7030371-7031343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7038706-7039046:-1:exon

position:7038706:-1
position: 7038706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7037729-7037770:-1:exon

position:7037729:-1
position: 7037729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7037770:-1
position: 7037770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7037388-7037550:-1:exon

position:7037388:-1
position: 7037388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7037550:-1
position: 7037550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7035260-7035525:-1:exon

position:7035260:-1
position: 7035260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7035525:-1
position: 7035525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7033882-7034051:-1:exon

position:7033882:-1
position: 7033882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7034051:-1
position: 7034051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7030371-7031343:-1:exon

position:7031343:-1
position: 7031343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRSS48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PRSS48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease 48
translation: MGPGGCAFLLSLLLGSFISSFQKKTLQSVCGRPVYSGRVVGGKDAAATRWPWQVSLQLSNSHVCGGSLLSDRWIVTAAHCLQMTRIPFLYTVQLGSVDRDNLDEGVILRVSRIVIHPTYSNVSGDIALLRLFSRVTYSSSILPICLSNVKKKRLIIPDSCWVTGWGKLKEEDADYPTILQEAEVPIIKHQKCENIYNPLGSFLPQVQPVIMETMICAGDVKKGKDTCQGDSGGPLACHIDGIWILIGLSSWGRGCGISFPGIYTNVTYYQKWIMSVISRAEVLGANNLNLSDFLFSIVPLSLALLGPSCVFGSNILPGE
SIO_010081: PRSS48
subclass of: SO_0000673
so part of: PRSS48
location: complement(join(7031068..7031343,7033882..7034051,7035260..7035525,7037388..7037550,7037729..7037770,7038706..7038748))
location: region:7031068-7038748:-1
so has part: feature:7038706-7038748:-1:exon
so has part: feature:7037729-7037770:-1:exon
so has part: feature:7037388-7037550:-1:exon
so has part: feature:7035260-7035525:-1:exon
so has part: feature:7033882-7034051:-1:exon
so has part: feature:7031068-7031343:-1:exon

XP_019833670.1
type: Protein
SIO_000068: ncbiprotein

position:7031068:-1
position: 7031068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7038748:-1
position: 7038748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7038706-7038748:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7037729-7037770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7037388-7037550:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7035260-7035525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7033882-7034051:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7031068-7031343:-1:exon

SH3D19
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: SH3D19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7094379..7203669
location: region:7094379-7203669:1
so has part: feature:7094379-7203669:1:exon
subclass of: SO_0000010

109571317
type: Gene
SIO_000068: ncbigene

position:7094379:1
position: 7094379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7203669:1
position: 7203669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7094379-7203669:1:exon

SH3D19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SH3D19
product: SH3 domain containing 19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 48 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019977699.1
SIO_010081: SH3D19
subclass of: SO_0000673
so part of: SH3D19
location: join(7094379..7094554,7096314..7096353,7136973..7137013,7148385..7148425,7149790..7149832,7152305..7152443,7152555..7152717,7153788..7154777,7164958..7165065,7171584..7171699,7178402..7178463,7179324..7179588,7183900..7183968,7184138..7184278,7187836..7187908,7188901..7189031,7191196..7191251,7193706..7193908,7194617..7194669,7197699..7197885,7198294..7198391,7201717..7203669)
location: region:7094379-7203669:1
so has part: feature:7094379-7094554:1:exon
so has part: feature:7096314-7096353:1:exon
so has part: feature:7136973-7137013:1:exon
so has part: feature:7148385-7148425:1:exon
so has part: feature:7149790-7149832:1:exon
so has part: feature:7152305-7152443:1:exon
so has part: feature:7152555-7152717:1:exon
so has part: feature:7153788-7154777:1:exon
so has part: feature:7164958-7165065:1:exon
so has part: feature:7171584-7171699:1:exon
so has part: feature:7178402-7178463:1:exon
so has part: feature:7179324-7179588:1:exon
so has part: feature:7183900-7183968:1:exon
so has part: feature:7184138-7184278:1:exon
so has part: feature:7187836-7187908:1:exon
so has part: feature:7188901-7189031:1:exon
so has part: feature:7191196-7191251:1:exon
so has part: feature:7193706-7193908:1:exon
so has part: feature:7194617-7194669:1:exon
so has part: feature:7197699-7197885:1:exon
so has part: feature:7198294-7198391:1:exon
so has part: feature:7201717-7203669:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7094379-7094554:1:exon

position:7094554:1
position: 7094554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7096314-7096353:1:exon

position:7096314:1
position: 7096314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7096353:1
position: 7096353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7136973-7137013:1:exon

position:7136973:1
position: 7136973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7137013:1
position: 7137013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7148385-7148425:1:exon

position:7148385:1
position: 7148385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7148425:1
position: 7148425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7149790-7149832:1:exon

position:7149790:1
position: 7149790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7149832:1
position: 7149832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7152305-7152443:1:exon

position:7152305:1
position: 7152305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7152443:1
position: 7152443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7152555-7152717:1:exon

position:7152555:1
position: 7152555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7152717:1
position: 7152717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7153788-7154777:1:exon

position:7153788:1
position: 7153788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7154777:1
position: 7154777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7164958-7165065:1:exon

position:7164958:1
position: 7164958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7165065:1
position: 7165065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7171584-7171699:1:exon

position:7171584:1
position: 7171584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7171699:1
position: 7171699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7178402-7178463:1:exon

position:7178402:1
position: 7178402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7178463:1
position: 7178463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7179324-7179588:1:exon

position:7179324:1
position: 7179324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7179588:1
position: 7179588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7183900-7183968:1:exon

position:7183900:1
position: 7183900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7183968:1
position: 7183968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7184138-7184278:1:exon

position:7184138:1
position: 7184138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7184278:1
position: 7184278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7187836-7187908:1:exon

position:7187836:1
position: 7187836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7187908:1
position: 7187908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7188901-7189031:1:exon

position:7188901:1
position: 7188901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7189031:1
position: 7189031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7191196-7191251:1:exon

position:7191196:1
position: 7191196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7191251:1
position: 7191251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7193706-7193908:1:exon

position:7193706:1
position: 7193706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7193908:1
position: 7193908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7194617-7194669:1:exon

position:7194617:1
position: 7194617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7194669:1
position: 7194669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7197699-7197885:1:exon

position:7197699:1
position: 7197699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7197885:1
position: 7197885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7198294-7198391:1:exon

position:7198294:1
position: 7198294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7198391:1
position: 7198391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7201717-7203669:1:exon

position:7201717:1
position: 7201717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SH3D19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SH3D19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-containing protein 19
translation: MPRGRASRTSIQSELHRDRRRPEITIVAAEPLRPTSWFPGAHPPGLAFPPASAAGPWRPSELVPAELPPSYEQVIKEINQVQVNTTNNNNAAATPRHTITSATQTDFSEEIDNHLPQSNATLQAPLKPLQPSPAXSARHPPTIEGPLIVFDISEEQNCPQNSSAPRCPVPKPRSKSNLRPVARDSHVKEQNSXSSPVAAQEEAAPSRPXSLWEGASCPEGQAAMNTMSAEQSRSTVISRIKALEGQTSTESSGLPKKPEIVPRTIPPRPAVSSGKPSVAPKPAASRASGEWDSWTASRLRGAPSPHSPXKEARSSPVTKPELPKKPNPGLIRSIXLESLGGGPMAESPNGGKKAPTPAPRPLLPKKSVSSETSPCSVALLKPVTVPPRLSVASQAKAFRSLGEGPPASPPVPAQQSKPPGDIDLISFDDDVLPPPSGNLAEDSVGPDMVLDPFQLPTRTEPAKEQAIQPAPTRKPTVIRIPAKXGKCLHEEDPQSPPPLPTEKPIGNTFSTVSGKLGNADRTRNLESDIAGQSGGSGRGPPRLPPRPVNGKVIPARQPPPKGAPERPPPPKLPATRTSNKKLPFNRSSSDMDLQKKPSNLAPGLSKAKSQVFKNQDPVLPPRPKPGHPLYRKYMLSVPHGIANEDVIPQNPGELSCKRGDVLVILKQAEGNYLECRKGDDAGRVHLSQMKIITPLDEHLSSRPNDPSCPQKPVDSAAPHAIVLHDFPAEQADDLSLTXGEIVYLLEKIDTDWYRGKCRNQTGVFPANYXKVIIDVPGGNGKRESISSHCVKGPRCVARFEYIGDQKDELSFSEGEIIILKEYVNDEWARGELGDRSGIFPLNFVELIEDHPTSGTNVLSTKVPPKTKKEDSGANSQENNLCGEWCEALHSFMAETSEDLSFKRGDRILILERVDSDWYKGRLRDREGIFPAVFVRPCSAEAKGVAALSLKGRKAKALYDFHGENEDELSFKAGDIITELESVDDDWMSGELMGKSGIFPKTYIQFLQVS
SIO_010081: SH3D19
subclass of: SO_0000673
so part of: SH3D19
location: join(7148410..7148425,7149790..7149832,7152305..7152443,7152555..7152717,7153788..7154777,7164958..7165065,7171584..7171699,7178402..7178463,7179324..7179588,7183900..7183968,7184138..7184278,7187836..7187908,7188901..7189031,7191196..7191251,7193706..7193908,7194617..7194669,7197699..7197885,7198294..7198391,7201717..7201833)
location: region:7148410-7201833:1
so has part: feature:7148410-7148425:1:exon
so has part: feature:7149790-7149832:1:exon
so has part: feature:7152305-7152443:1:exon
so has part: feature:7152555-7152717:1:exon
so has part: feature:7153788-7154777:1:exon
so has part: feature:7164958-7165065:1:exon
so has part: feature:7171584-7171699:1:exon
so has part: feature:7178402-7178463:1:exon
so has part: feature:7179324-7179588:1:exon
so has part: feature:7183900-7183968:1:exon
so has part: feature:7184138-7184278:1:exon
so has part: feature:7187836-7187908:1:exon
so has part: feature:7188901-7189031:1:exon
so has part: feature:7191196-7191251:1:exon
so has part: feature:7193706-7193908:1:exon
so has part: feature:7194617-7194669:1:exon
so has part: feature:7197699-7197885:1:exon
so has part: feature:7198294-7198391:1:exon
so has part: feature:7201717-7201833:1:exon

XP_019833258.1
type: Protein
SIO_000068: ncbiprotein

position:7148410:1
position: 7148410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7201833:1
position: 7201833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7148410-7148425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7149790-7149832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7152305-7152443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7152555-7152717:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7153788-7154777:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7164958-7165065:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7171584-7171699:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7178402-7178463:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7179324-7179588:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7183900-7183968:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7184138-7184278:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7187836-7187908:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7188901-7189031:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7191196-7191251:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7193706-7193908:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7194617-7194669:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7197699-7197885:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7198294-7198391:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7201717-7201833:1:exon

RPS3A
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: RPS3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7218876..7225126)
location: region:7218876-7225126:-1
so has part: feature:7218876-7225126:-1:exon
subclass of: SO_0000010

109571391
type: Gene
SIO_000068: ncbigene

position:7218876:-1
position: 7218876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7225126:-1
position: 7225126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7218876-7225126:-1:exon

RPS3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: RPS3A
product: ribosomal protein S3A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 mRNAs, 590 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 262 samples with support for all annotated introns
transcript id: XM_019977835.1
SIO_010081: RPS3A
subclass of: SO_0000673
so part of: RPS3A
location: complement(join(7218876..7220582,7220803..7220912,7221421..7221629,7223661..7223848,7224211..7224314,7225016..7225126))
location: region:7218876-7225126:-1
so has part: feature:7225016-7225126:-1:exon
so has part: feature:7224211-7224314:-1:exon
so has part: feature:7223661-7223848:-1:exon
so has part: feature:7221421-7221629:-1:exon
so has part: feature:7220803-7220912:-1:exon
so has part: feature:7218876-7220582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7225016-7225126:-1:exon

position:7225016:-1
position: 7225016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7224211-7224314:-1:exon

position:7224211:-1
position: 7224211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7224314:-1
position: 7224314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7223661-7223848:-1:exon

position:7223661:-1
position: 7223661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7223848:-1
position: 7223848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7221421-7221629:-1:exon

position:7221421:-1
position: 7221421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7221629:-1
position: 7221629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7220803-7220912:-1:exon

position:7220803:-1
position: 7220803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7220912:-1
position: 7220912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7218876-7220582:-1:exon

position:7220582:-1
position: 7220582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: RPS3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S3a
translation: MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV
SIO_010081: RPS3A
subclass of: SO_0000673
so part of: RPS3A
location: complement(join(7220461..7220582,7220803..7220912,7221421..7221629,7223661..7223848,7224211..7224314,7225016..7225077))
location: region:7220461-7225077:-1
so has part: feature:7225016-7225077:-1:exon
so has part: feature:7224211-7224314:-1:exon
so has part: feature:7223661-7223848:-1:exon
so has part: feature:7221421-7221629:-1:exon
so has part: feature:7220803-7220912:-1:exon
so has part: feature:7220461-7220582:-1:exon

XP_019833394.1
type: Protein
SIO_000068: ncbiprotein

position:7220461:-1
position: 7220461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7225077:-1
position: 7225077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7225016-7225077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7224211-7224314:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7223661-7223848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7221421-7221629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7220803-7220912:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7220461-7220582:-1:exon

LOC109571123
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7351295..7357363)
location: region:7351295-7357363:-1
so has part: feature:7351295-7357363:-1:exon
subclass of: SO_0000011

109571123
type: Gene
SIO_000068: ncbigene

position:7351295:-1
position: 7351295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7357363:-1
position: 7357363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7351295-7357363:-1:exon

LOC109571123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109571123
product: uncharacterized LOC109571123
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_002182605.1
SIO_010081: LOC109571123
subclass of: SO_0000673
so part of: LOC109571123
location: complement(join(7351295..7351580,7357331..7357363))
location: region:7351295-7357363:-1
so has part: feature:7357331-7357363:-1:exon
so has part: feature:7351295-7351580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7357331-7357363:-1:exon

position:7357331:-1
position: 7357331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7351295-7351580:-1:exon

position:7351580:-1
position: 7351580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRBA
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LRBA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7357405..8241077
location: region:7357405-8241077:1
so has part: feature:7357405-8241077:1:exon
subclass of: SO_0000010

109571121
type: Gene
SIO_000068: ncbigene

position:7357405:1
position: 7357405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8241077:1
position: 8241077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7357405-8241077:1:exon

LRBA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LRBA
product: LPS responsive beige-like anchor protein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019977354.1
SIO_010081: LRBA
subclass of: SO_0000673
so part of: LRBA
location: join(7357405..7357486,7357819..7358256,7399671..7399902,7400107..7400207,7408045..7408140,7412625..7412746,7412832..7412958,7413564..7413683,7415692..7415838,7427874..7428071,7428266..7428399,7430114..7430222,7430513..7430665,7435126..7435294,7438771..7438850,7440189..7440251,7444021..7444118,7452648..7452740,7455082..7455190,7455576..7455657,7458757..7458880,7459183..7459375,7485478..7486533,7487491..7487663,7488521..7488675,7489091..7489271,7492246..7492373,7492802..7492909,7497258..7497414,7501250..7501691,7512716..7512846,7526345..7526423,7528427..7528560,7536335..7536396,7576409..7576473,7604537..7604645,7652476..7652642,7813407..7813531,7821429..7821575,7824000..7824136,7912726..7912843,7915028..7915130,7929922..7930037,7932938..7933050,7960529..7960669,7961701..7961820,7978192..7978344,8059909..8060076,8090162..8090251,8095276..8095453,8100713..8100775,8106345..8106500,8112842..8113006,8227675..8227776,8230886..8231082,8235552..8235703,8239938..8241077)
location: region:7357405-8241077:1
so has part: feature:7357405-7357486:1:exon
so has part: feature:7357819-7358256:1:exon
so has part: feature:7399671-7399902:1:exon
so has part: feature:7400107-7400207:1:exon
so has part: feature:7408045-7408140:1:exon
so has part: feature:7412625-7412746:1:exon
so has part: feature:7412832-7412958:1:exon
so has part: feature:7413564-7413683:1:exon
so has part: feature:7415692-7415838:1:exon
so has part: feature:7427874-7428071:1:exon
so has part: feature:7428266-7428399:1:exon
so has part: feature:7430114-7430222:1:exon
so has part: feature:7430513-7430665:1:exon
so has part: feature:7435126-7435294:1:exon
so has part: feature:7438771-7438850:1:exon
so has part: feature:7440189-7440251:1:exon
so has part: feature:7444021-7444118:1:exon
so has part: feature:7452648-7452740:1:exon
so has part: feature:7455082-7455190:1:exon
so has part: feature:7455576-7455657:1:exon
so has part: feature:7458757-7458880:1:exon
so has part: feature:7459183-7459375:1:exon
so has part: feature:7485478-7486533:1:exon
so has part: feature:7487491-7487663:1:exon
so has part: feature:7488521-7488675:1:exon
so has part: feature:7489091-7489271:1:exon
so has part: feature:7492246-7492373:1:exon
so has part: feature:7492802-7492909:1:exon
so has part: feature:7497258-7497414:1:exon
so has part: feature:7501250-7501691:1:exon
so has part: feature:7512716-7512846:1:exon
so has part: feature:7526345-7526423:1:exon
so has part: feature:7528427-7528560:1:exon
so has part: feature:7536335-7536396:1:exon
so has part: feature:7576409-7576473:1:exon
so has part: feature:7604537-7604645:1:exon
so has part: feature:7652476-7652642:1:exon
so has part: feature:7813407-7813531:1:exon
so has part: feature:7821429-7821575:1:exon
so has part: feature:7824000-7824136:1:exon
so has part: feature:7912726-7912843:1:exon
so has part: feature:7915028-7915130:1:exon
so has part: feature:7929922-7930037:1:exon
so has part: feature:7932938-7933050:1:exon
so has part: feature:7960529-7960669:1:exon
so has part: feature:7961701-7961820:1:exon
so has part: feature:7978192-7978344:1:exon
so has part: feature:8059909-8060076:1:exon
so has part: feature:8090162-8090251:1:exon
so has part: feature:8095276-8095453:1:exon
so has part: feature:8100713-8100775:1:exon
so has part: feature:8106345-8106500:1:exon
so has part: feature:8112842-8113006:1:exon
so has part: feature:8227675-8227776:1:exon
so has part: feature:8230886-8231082:1:exon
so has part: feature:8235552-8235703:1:exon
so has part: feature:8239938-8241077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7357405-7357486:1:exon

position:7357486:1
position: 7357486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7357819-7358256:1:exon

position:7357819:1
position: 7357819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7358256:1
position: 7358256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7399671-7399902:1:exon

position:7399671:1
position: 7399671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7399902:1
position: 7399902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7400107-7400207:1:exon

position:7400107:1
position: 7400107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7400207:1
position: 7400207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7408045-7408140:1:exon

position:7408045:1
position: 7408045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7408140:1
position: 7408140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7412625-7412746:1:exon

position:7412625:1
position: 7412625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7412746:1
position: 7412746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7412832-7412958:1:exon

position:7412832:1
position: 7412832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7412958:1
position: 7412958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7413564-7413683:1:exon

position:7413564:1
position: 7413564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7413683:1
position: 7413683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7415692-7415838:1:exon

position:7415692:1
position: 7415692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7415838:1
position: 7415838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7427874-7428071:1:exon

position:7427874:1
position: 7427874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7428071:1
position: 7428071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7428266-7428399:1:exon

position:7428266:1
position: 7428266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7428399:1
position: 7428399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7430114-7430222:1:exon

position:7430114:1
position: 7430114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7430222:1
position: 7430222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7430513-7430665:1:exon

position:7430513:1
position: 7430513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7430665:1
position: 7430665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7435126-7435294:1:exon

position:7435126:1
position: 7435126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7435294:1
position: 7435294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7438771-7438850:1:exon

position:7438771:1
position: 7438771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7438850:1
position: 7438850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7440189-7440251:1:exon

position:7440189:1
position: 7440189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7440251:1
position: 7440251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7444021-7444118:1:exon

position:7444021:1
position: 7444021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7444118:1
position: 7444118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7452648-7452740:1:exon

position:7452648:1
position: 7452648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7452740:1
position: 7452740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7455082-7455190:1:exon

position:7455082:1
position: 7455082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7455190:1
position: 7455190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7455576-7455657:1:exon

position:7455576:1
position: 7455576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7455657:1
position: 7455657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7458757-7458880:1:exon

position:7458757:1
position: 7458757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7458880:1
position: 7458880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7459183-7459375:1:exon

position:7459183:1
position: 7459183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7459375:1
position: 7459375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7485478-7486533:1:exon

position:7485478:1
position: 7485478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7486533:1
position: 7486533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7487491-7487663:1:exon

position:7487491:1
position: 7487491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7487663:1
position: 7487663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7488521-7488675:1:exon

position:7488521:1
position: 7488521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7488675:1
position: 7488675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7489091-7489271:1:exon

position:7489091:1
position: 7489091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7489271:1
position: 7489271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7492246-7492373:1:exon

position:7492246:1
position: 7492246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7492373:1
position: 7492373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7492802-7492909:1:exon

position:7492802:1
position: 7492802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7492909:1
position: 7492909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:7497258-7497414:1:exon

position:7497258:1
position: 7497258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7497414:1
position: 7497414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:7501250-7501691:1:exon

position:7501250:1
position: 7501250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7501691:1
position: 7501691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:7512716-7512846:1:exon

position:7512716:1
position: 7512716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7512846:1
position: 7512846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:7526345-7526423:1:exon

position:7526345:1
position: 7526345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7526423:1
position: 7526423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:7528427-7528560:1:exon

position:7528427:1
position: 7528427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7528560:1
position: 7528560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:7536335-7536396:1:exon

position:7536335:1
position: 7536335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7536396:1
position: 7536396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:7576409-7576473:1:exon

position:7576409:1
position: 7576409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7576473:1
position: 7576473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:7604537-7604645:1:exon

position:7604537:1
position: 7604537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7604645:1
position: 7604645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:7652476-7652642:1:exon

position:7652476:1
position: 7652476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7652642:1
position: 7652642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:7813407-7813531:1:exon

position:7813407:1
position: 7813407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7813531:1
position: 7813531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:7821429-7821575:1:exon

position:7821429:1
position: 7821429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7821575:1
position: 7821575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:7824000-7824136:1:exon

position:7824000:1
position: 7824000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7824136:1
position: 7824136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:7912726-7912843:1:exon

position:7912726:1
position: 7912726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7912843:1
position: 7912843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:7915028-7915130:1:exon

position:7915028:1
position: 7915028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7915130:1
position: 7915130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:7929922-7930037:1:exon

position:7929922:1
position: 7929922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7930037:1
position: 7930037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:7932938-7933050:1:exon

position:7932938:1
position: 7932938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7933050:1
position: 7933050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:7960529-7960669:1:exon

position:7960529:1
position: 7960529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7960669:1
position: 7960669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:7961701-7961820:1:exon

position:7961701:1
position: 7961701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7961820:1
position: 7961820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:7978192-7978344:1:exon

position:7978192:1
position: 7978192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7978344:1
position: 7978344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:8059909-8060076:1:exon

position:8059909:1
position: 8059909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8060076:1
position: 8060076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:8090162-8090251:1:exon

position:8090162:1
position: 8090162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8090251:1
position: 8090251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:8095276-8095453:1:exon

position:8095276:1
position: 8095276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8095453:1
position: 8095453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:8100713-8100775:1:exon

position:8100713:1
position: 8100713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8100775:1
position: 8100775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:8106345-8106500:1:exon

position:8106345:1
position: 8106345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8106500:1
position: 8106500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:8112842-8113006:1:exon

position:8112842:1
position: 8112842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8113006:1
position: 8113006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:8227675-8227776:1:exon

position:8227675:1
position: 8227675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8227776:1
position: 8227776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:8230886-8231082:1:exon

position:8230886:1
position: 8230886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8231082:1
position: 8231082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:8235552-8235703:1:exon

position:8235552:1
position: 8235552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8235703:1
position: 8235703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:8239938-8241077:1:exon

position:8239938:1
position: 8239938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRBA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LRBA
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: lipopolysaccharide-responsive and beige-like anchor protein
translation: MASEDNNVPSPPPTGDDGGGGGKGEEAPAEGGALSLTPGLPIRGIRMKFAVLTGLVEVGEVSNRDIVETIFNLLVGGQFDLEMNFIIQEGESIICMVDLLEKCDVTCQAEVWSMFTAILKKSIRNLQICTEVGLVEKVLGKIEKVDSMIADLLVDMLGVLASYNLTVRELKLFFSKLQGDKGQWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPVAKWPYQNGFTFHTWLRMDPVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKWYMVTVVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQMTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFTYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSVGGVQVLFPLFAQLDYKQYLSDEIDSTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSHVSRAVLELCLVFSKYLSNLPNGMPLLKQLCDHILLNPALWIHTPAKVQLTLYTYLSTEFIGTVNIYNAIRRVGTVLLIMHTLKYYYWAVNPQDRSGITPKGLDGPRPNXKEMFSLRAFLLMFIKQLVMKDNGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRNGLRVIYKLLASTSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLITMTTYNVLFEILIEQICTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSVQCPESMEVRRAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYHAIKYEWGGWRVWVDTLSITHSKVTFEIHKENLASILREHQGKVDEETGHCSSSPVQAVSGISREVNVSVGSQQSDTKDSPVSSDITRNSDEKSSIGQTSSVESASNTELQIPATSBEERTTGPENEELLDEVPLEETLINETVNADNLDGSSDITEAATISSDSFTTGKDTVTVNEVTASISSPSEEDASEVPELLXKSIVEEDDDDYVELKVECSPIEEASLPTEPQDNSLSPGASEASERXDVFSNDHKLIFQEEEAVXKKQTDSETQDPEDSGILPMTAPGTSVTPADVTASXAAVHPDIAHTLEEREKTNSTGETKLNSDSHGNIFESPTTSEHKIAKLDVSSVATDTERLELKANTNMEVSQPPQPALEMSRQQEQPGQGTADTVNGQRRDSRSMFRIPEFRWSQMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLIFSVMDNMVMACGGILPLLSAATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKNMSSGGILRQSLRLVCAVAVRNCLECQQQSQLRSKGEXGKSQKMAHSLIPTGKSAAKSPVDLVTGGXSPVRDFDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERHSQSRETGSECGNLSLPEDSPAASSPLTPASVEESESTSPAPRRNSGTGGETAPGLGSGADVAAPGVPPRVGAGPDAINEALCTLSSEVSKSQETKSDGGNESDSKAAPSVPVSKNVNVKDILRSLVNIPADGVXVDPALLPPACLGALGDLSAEQPVQFRSFDRSVIVATKKSAVLPSTLTGIPTNAVSVVSSVDSAQASDVGGESPGGRSSNAKLPAVPTVGSVPQDQVSNMSITERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAEFESLCAQYSADKREDEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAVSRPREFWRLDYWEDDLRRRRRFVRNPLGS…
SIO_010081: LRBA
subclass of: SO_0000673
so part of: LRBA
location: join(7358038..7358256,7399671..7399902,7400107..7400207,7408045..7408140,7412625..7412746,7412832..7412958,7413564..7413683,7415692..7415838,7427874..7428071,7428266..7428399,7430114..7430222,7430513..7430665,7435126..7435294,7438771..7438850,7440189..7440251,7444021..7444118,7452648..7452740,7455082..7455190,7455576..7455657,7458757..7458880,7459183..7459375,7485478..7486533,7487491..7487663,7488521..7488675,7489091..7489271,7492246..7492373,7492802..7492909,7497258..7497414,7501250..7501691,7512716..7512846,7526345..7526423,7528427..7528560,7536335..7536396,7576409..7576473,7604537..7604645,7652476..7652642,7813407..7813531,7821429..7821575,7824000..7824136,7912726..7912843,7915028..7915130,7929922..7930037,7932938..7933050,7960529..7960669,7961701..7961820,7978192..7978344,8059909..8060076,8090162..8090251,8095276..8095453,8100713..8100775,8106345..8106500,8112842..8113006,8227675..8227776,8230886..8231082,8235552..8235703,8239938..8240028)
location: region:7358038-8240028:1
so has part: feature:7358038-7358256:1:exon
so has part: feature:7399671-7399902:1:exon
so has part: feature:7400107-7400207:1:exon
so has part: feature:7408045-7408140:1:exon
so has part: feature:7412625-7412746:1:exon
so has part: feature:7412832-7412958:1:exon
so has part: feature:7413564-7413683:1:exon
so has part: feature:7415692-7415838:1:exon
so has part: feature:7427874-7428071:1:exon
so has part: feature:7428266-7428399:1:exon
so has part: feature:7430114-7430222:1:exon
so has part: feature:7430513-7430665:1:exon
so has part: feature:7435126-7435294:1:exon
so has part: feature:7438771-7438850:1:exon
so has part: feature:7440189-7440251:1:exon
so has part: feature:7444021-7444118:1:exon
so has part: feature:7452648-7452740:1:exon
so has part: feature:7455082-7455190:1:exon
so has part: feature:7455576-7455657:1:exon
so has part: feature:7458757-7458880:1:exon
so has part: feature:7459183-7459375:1:exon
so has part: feature:7485478-7486533:1:exon
so has part: feature:7487491-7487663:1:exon
so has part: feature:7488521-7488675:1:exon
so has part: feature:7489091-7489271:1:exon
so has part: feature:7492246-7492373:1:exon
so has part: feature:7492802-7492909:1:exon
so has part: feature:7497258-7497414:1:exon
so has part: feature:7501250-7501691:1:exon
so has part: feature:7512716-7512846:1:exon
so has part: feature:7526345-7526423:1:exon
so has part: feature:7528427-7528560:1:exon
so has part: feature:7536335-7536396:1:exon
so has part: feature:7576409-7576473:1:exon
so has part: feature:7604537-7604645:1:exon
so has part: feature:7652476-7652642:1:exon
so has part: feature:7813407-7813531:1:exon
so has part: feature:7821429-7821575:1:exon
so has part: feature:7824000-7824136:1:exon
so has part: feature:7912726-7912843:1:exon
so has part: feature:7915028-7915130:1:exon
so has part: feature:7929922-7930037:1:exon
so has part: feature:7932938-7933050:1:exon
so has part: feature:7960529-7960669:1:exon
so has part: feature:7961701-7961820:1:exon
so has part: feature:7978192-7978344:1:exon
so has part: feature:8059909-8060076:1:exon
so has part: feature:8090162-8090251:1:exon
so has part: feature:8095276-8095453:1:exon
so has part: feature:8100713-8100775:1:exon
so has part: feature:8106345-8106500:1:exon
so has part: feature:8112842-8113006:1:exon
so has part: feature:8227675-8227776:1:exon
so has part: feature:8230886-8231082:1:exon
so has part: feature:8235552-8235703:1:exon
so has part: feature:8239938-8240028:1:exon

XP_019832913.1
type: Protein
SIO_000068: ncbiprotein

position:7358038:1
position: 7358038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8240028:1
position: 8240028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7358038-7358256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7399671-7399902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7400107-7400207:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7408045-7408140:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7412625-7412746:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7412832-7412958:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7413564-7413683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7415692-7415838:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7427874-7428071:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7428266-7428399:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7430114-7430222:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7430513-7430665:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7435126-7435294:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7438771-7438850:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7440189-7440251:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7444021-7444118:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7452648-7452740:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7455082-7455190:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7455576-7455657:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7458757-7458880:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7459183-7459375:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7485478-7486533:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7487491-7487663:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7488521-7488675:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7489091-7489271:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7492246-7492373:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7492802-7492909:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7497258-7497414:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7501250-7501691:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7512716-7512846:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7526345-7526423:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7528427-7528560:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7536335-7536396:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7576409-7576473:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7604537-7604645:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7652476-7652642:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7813407-7813531:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7821429-7821575:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7824000-7824136:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:7912726-7912843:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:7915028-7915130:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:7929922-7930037:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:7932938-7933050:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:7960529-7960669:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:7961701-7961820:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:7978192-7978344:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:8059909-8060076:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:8090162-8090251:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:8095276-8095453:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:8100713-8100775:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:8106345-8106500:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:8112842-8113006:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:8227675-8227776:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:8230886-8231082:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:8235552-8235703:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:8239938-8240028:1:exon

MAB21L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: MAB21L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7827058..7829843)
location: region:7827058-7829843:-1
so has part: feature:7827058-7829843:-1:exon
subclass of: SO_0000010

109571120
type: Gene
SIO_000068: ncbigene

position:7827058:-1
position: 7827058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7829843:-1
position: 7829843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7827058-7829843:-1:exon

MAB21L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MAB21L2
product: mab-21 like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 17 ESTs, 11 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019977353.1
SIO_010081: MAB21L2
subclass of: SO_0000673
so part of: MAB21L2
location: complement(7827058..7829843)
location: region:7827058-7829843:-1
so has part: feature:7827058-7829843:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7827058-7829843:-1:exon

MAB21L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MAB21L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein mab-21-like 2
translation: MIAAQAKLVYQLNKYYTERCQARKAAIAKTIREVCKVVSDVLKEVEVQEPRFISSLSEIDARYEGLEVISPTEFEVVLYLNQMGVFNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKIRSRFQTLVAQAVDKCSYRDVVKMIADTSEVKLRIRERYVVQITPAFKCTGIWPRSAAQWPMPHIPWPGPNRVAEVKAEGFNLLSKECYSLTGKQSSAESDAWVLQFGEAENRLLMGGCRNKCLSVLKTLRDRHLELPGQPLNNYHMKTLLLYECEKHPRETDWDEACLGDRLNGILLQLISCLQCRRCPHYFLPNLDLFQGKPHSALESAAKQTWRLAREILTNPKSLDKL
SIO_010081: MAB21L2
subclass of: SO_0000673
so part of: MAB21L2
location: complement(7827663..7828742)
location: region:7827663-7828742:-1
so has part: feature:7827663-7828742:-1:exon

XP_019832912.1
type: Protein
SIO_000068: ncbiprotein

position:7827663:-1
position: 7827663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7828742:-1
position: 7828742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7827663-7828742:-1:exon

DCLK2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: DCLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8252141..8440684)
location: region:8252141-8440684:-1
so has part: feature:8252141-8440684:-1:exon
subclass of: SO_0000010

109571457
type: Gene
SIO_000068: ncbigene

position:8252141:-1
position: 8252141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8440684:-1
position: 8440684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8252141-8440684:-1:exon

DCLK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: DCLK2
product: doublecortin like kinase 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019977953.1
SIO_010081: DCLK2
subclass of: SO_0000673
so part of: DCLK2
location: complement(join(8252141..8254425,8256938..8257054,8258114..8258194,8258898..8258994,8263958..8264035,8264438..8264571,8272810..8272956,8273537..8273656,8284470..8284527,8286679..8286784,8288131..8288203,8310737..8310831,8315891..8315992,8320116..8320218,8416069..8416400,8440116..8440684))
location: region:8252141-8440684:-1
so has part: feature:8440116-8440684:-1:exon
so has part: feature:8416069-8416400:-1:exon
so has part: feature:8320116-8320218:-1:exon
so has part: feature:8315891-8315992:-1:exon
so has part: feature:8310737-8310831:-1:exon
so has part: feature:8288131-8288203:-1:exon
so has part: feature:8286679-8286784:-1:exon
so has part: feature:8284470-8284527:-1:exon
so has part: feature:8273537-8273656:-1:exon
so has part: feature:8272810-8272956:-1:exon
so has part: feature:8264438-8264571:-1:exon
so has part: feature:8263958-8264035:-1:exon
so has part: feature:8258898-8258994:-1:exon
so has part: feature:8258114-8258194:-1:exon
so has part: feature:8256938-8257054:-1:exon
so has part: feature:8252141-8254425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8440116-8440684:-1:exon

position:8440116:-1
position: 8440116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8416069-8416400:-1:exon

position:8416069:-1
position: 8416069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8416400:-1
position: 8416400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8320116-8320218:-1:exon

position:8320116:-1
position: 8320116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8320218:-1
position: 8320218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8315891-8315992:-1:exon

position:8315891:-1
position: 8315891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8315992:-1
position: 8315992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8310737-8310831:-1:exon

position:8310737:-1
position: 8310737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8310831:-1
position: 8310831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8288131-8288203:-1:exon

position:8288131:-1
position: 8288131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8288203:-1
position: 8288203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8286679-8286784:-1:exon

position:8286679:-1
position: 8286679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8286784:-1
position: 8286784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8284470-8284527:-1:exon

position:8284470:-1
position: 8284470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8284527:-1
position: 8284527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8273537-8273656:-1:exon

position:8273537:-1
position: 8273537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8273656:-1
position: 8273656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8272810-8272956:-1:exon

position:8272810:-1
position: 8272810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8272956:-1
position: 8272956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8264438-8264571:-1:exon

position:8264438:-1
position: 8264438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8264571:-1
position: 8264571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8263958-8264035:-1:exon

position:8263958:-1
position: 8263958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8264035:-1
position: 8264035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8258898-8258994:-1:exon

position:8258898:-1
position: 8258898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8258994:-1
position: 8258994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8258114-8258194:-1:exon

position:8258114:-1
position: 8258114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8258194:-1
position: 8258194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8256938-8257054:-1:exon

position:8256938:-1
position: 8256938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8257054:-1
position: 8257054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8252141-8254425:-1:exon

position:8254425:-1
position: 8254425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCLK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: DCLK2
product: doublecortin like kinase 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_019977952.1
SIO_010081: DCLK2
subclass of: SO_0000673
so part of: DCLK2
location: complement(join(8252141..8257054,8258114..8258194,8258898..8258994,8263958..8264035,8264438..8264571,8272810..8272956,8273537..8273656,8284470..8284527,8286679..8286784,8288131..8288203,8310737..8310831,8315891..8315992,8320116..8320218,8416069..8416400,8440116..8440684))
location: region:8252141-8440684:-1
so has part: feature:8440116-8440684:-1:exon
so has part: feature:8416069-8416400:-1:exon
so has part: feature:8320116-8320218:-1:exon
so has part: feature:8315891-8315992:-1:exon
so has part: feature:8310737-8310831:-1:exon
so has part: feature:8288131-8288203:-1:exon
so has part: feature:8286679-8286784:-1:exon
so has part: feature:8284470-8284527:-1:exon
so has part: feature:8273537-8273656:-1:exon
so has part: feature:8272810-8272956:-1:exon
so has part: feature:8264438-8264571:-1:exon
so has part: feature:8263958-8264035:-1:exon
so has part: feature:8258898-8258994:-1:exon
so has part: feature:8258114-8258194:-1:exon
so has part: feature:8252141-8257054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8440116-8440684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8416069-8416400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8320116-8320218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8315891-8315992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8310737-8310831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8288131-8288203:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8286679-8286784:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8284470-8284527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8273537-8273656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8272810-8272956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8264438-8264571:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8263958-8264035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8258898-8258994:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8258114-8258194:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8252141-8257054:-1:exon

DCLK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: DCLK2
product: doublecortin like kinase 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_019977951.1
SIO_010081: DCLK2
subclass of: SO_0000673
so part of: DCLK2
location: complement(join(8252141..8257054,8258114..8258194,8258898..8258994,8263958..8264035,8264438..8264571,8272810..8272956,8273537..8273656,8284470..8284527,8286679..8286784,8288131..8288206,8310737..8310831,8315891..8315992,8320116..8320218,8416069..8416400,8440116..8440684))
location: region:8252141-8440684:-1
so has part: feature:8440116-8440684:-1:exon
so has part: feature:8416069-8416400:-1:exon
so has part: feature:8320116-8320218:-1:exon
so has part: feature:8315891-8315992:-1:exon
so has part: feature:8310737-8310831:-1:exon
so has part: feature:8288131-8288206:-1:exon
so has part: feature:8286679-8286784:-1:exon
so has part: feature:8284470-8284527:-1:exon
so has part: feature:8273537-8273656:-1:exon
so has part: feature:8272810-8272956:-1:exon
so has part: feature:8264438-8264571:-1:exon
so has part: feature:8263958-8264035:-1:exon
so has part: feature:8258898-8258994:-1:exon
so has part: feature:8258114-8258194:-1:exon
so has part: feature:8252141-8257054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8440116-8440684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8416069-8416400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8320116-8320218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8315891-8315992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8310737-8310831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8288131-8288206:-1:exon

position:8288206:-1
position: 8288206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8286679-8286784:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8284470-8284527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8273537-8273656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8272810-8272956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8264438-8264571:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8263958-8264035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8258898-8258994:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8258114-8258194:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8252141-8257054:-1:exon

DCLK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: DCLK2
product: doublecortin like kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_019977949.1
SIO_010081: DCLK2
subclass of: SO_0000673
so part of: DCLK2
location: complement(join(8252141..8257054,8258114..8258194,8258898..8258994,8263958..8264035,8264438..8264571,8272810..8272956,8273537..8273656,8284470..8284527,8286679..8286784,8288131..8288203,8310737..8310831,8314965..8315015,8315891..8315992,8320116..8320218,8416069..8416400,8440116..8440684))
location: region:8252141-8440684:-1
so has part: feature:8440116-8440684:-1:exon
so has part: feature:8416069-8416400:-1:exon
so has part: feature:8320116-8320218:-1:exon
so has part: feature:8315891-8315992:-1:exon
so has part: feature:8314965-8315015:-1:exon
so has part: feature:8310737-8310831:-1:exon
so has part: feature:8288131-8288203:-1:exon
so has part: feature:8286679-8286784:-1:exon
so has part: feature:8284470-8284527:-1:exon
so has part: feature:8273537-8273656:-1:exon
so has part: feature:8272810-8272956:-1:exon
so has part: feature:8264438-8264571:-1:exon
so has part: feature:8263958-8264035:-1:exon
so has part: feature:8258898-8258994:-1:exon
so has part: feature:8258114-8258194:-1:exon
so has part: feature:8252141-8257054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8440116-8440684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8416069-8416400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8320116-8320218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8315891-8315992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8314965-8315015:-1:exon

position:8314965:-1
position: 8314965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8315015:-1
position: 8315015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8310737-8310831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8288131-8288203:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8286679-8286784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8284470-8284527:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8273537-8273656:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8272810-8272956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8264438-8264571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8263958-8264035:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8258898-8258994:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8258114-8258194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8252141-8257054:-1:exon

DCLK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: DCLK2
product: doublecortin like kinase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_019977950.1
SIO_010081: DCLK2
subclass of: SO_0000673
so part of: DCLK2
location: complement(join(8252141..8254425,8256938..8257054,8258114..8258194,8258898..8258994,8263958..8264035,8264438..8264571,8272810..8272956,8273537..8273656,8284470..8284527,8286679..8286784,8288131..8288206,8310737..8310831,8314965..8315015,8315891..8315992,8320116..8320218,8416069..8416400,8440116..8440684))
location: region:8252141-8440684:-1
so has part: feature:8440116-8440684:-1:exon
so has part: feature:8416069-8416400:-1:exon
so has part: feature:8320116-8320218:-1:exon
so has part: feature:8315891-8315992:-1:exon
so has part: feature:8314965-8315015:-1:exon
so has part: feature:8310737-8310831:-1:exon
so has part: feature:8288131-8288206:-1:exon
so has part: feature:8286679-8286784:-1:exon
so has part: feature:8284470-8284527:-1:exon
so has part: feature:8273537-8273656:-1:exon
so has part: feature:8272810-8272956:-1:exon
so has part: feature:8264438-8264571:-1:exon
so has part: feature:8263958-8264035:-1:exon
so has part: feature:8258898-8258994:-1:exon
so has part: feature:8258114-8258194:-1:exon
so has part: feature:8256938-8257054:-1:exon
so has part: feature:8252141-8254425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8440116-8440684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8416069-8416400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8320116-8320218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8315891-8315992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8314965-8315015:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8310737-8310831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8288131-8288206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8286679-8286784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8284470-8284527:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8273537-8273656:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8272810-8272956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8264438-8264571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8263958-8264035:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8258898-8258994:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8258114-8258194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8256938-8257054:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8252141-8254425:-1:exon

DCLK2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9915
gene: DCLK2
product: doublecortin like kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002182662.1
SIO_010081: DCLK2
so part of: DCLK2
location: complement(join(8252141..8254425,8255601..8257054,8258114..8258194,8258898..8258994,8263958..8264035,8264438..8264571,8272810..8272956,8273537..8273656,8284470..8284527,8286679..8286784,8288131..8288206,8310737..8310831,8314965..8315015,8315891..8315992,8320116..8320218,8416069..8416400,8440116..8440684))
location: region:8252141-8440684:-1
so has part: feature:8440116-8440684:-1:exon
so has part: feature:8416069-8416400:-1:exon
so has part: feature:8320116-8320218:-1:exon
so has part: feature:8315891-8315992:-1:exon
so has part: feature:8314965-8315015:-1:exon
so has part: feature:8310737-8310831:-1:exon
so has part: feature:8288131-8288206:-1:exon
so has part: feature:8286679-8286784:-1:exon
so has part: feature:8284470-8284527:-1:exon
so has part: feature:8273537-8273656:-1:exon
so has part: feature:8272810-8272956:-1:exon
so has part: feature:8264438-8264571:-1:exon
so has part: feature:8263958-8264035:-1:exon
so has part: feature:8258898-8258994:-1:exon
so has part: feature:8258114-8258194:-1:exon
so has part: feature:8255601-8257054:-1:exon
so has part: feature:8252141-8254425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8440116-8440684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8416069-8416400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8320116-8320218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8315891-8315992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8314965-8315015:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8310737-8310831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8288131-8288206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8286679-8286784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8284470-8284527:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8273537-8273656:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8272810-8272956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8264438-8264571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8263958-8264035:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8258898-8258994:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8258114-8258194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8255601-8257054:-1:exon

position:8255601:-1
position: 8255601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8252141-8254425:-1:exon

DCLK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: DCLK2
product: doublecortin like kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_019977948.1
SIO_010081: DCLK2
subclass of: SO_0000673
so part of: DCLK2
location: complement(join(8252141..8257054,8258114..8258194,8258898..8258994,8263958..8264035,8264438..8264571,8272810..8272956,8273537..8273656,8284470..8284527,8286679..8286784,8288131..8288206,8310737..8310831,8314965..8315015,8315891..8315992,8320116..8320218,8416069..8416400,8440116..8440684))
location: region:8252141-8440684:-1
so has part: feature:8440116-8440684:-1:exon
so has part: feature:8416069-8416400:-1:exon
so has part: feature:8320116-8320218:-1:exon
so has part: feature:8315891-8315992:-1:exon
so has part: feature:8314965-8315015:-1:exon
so has part: feature:8310737-8310831:-1:exon
so has part: feature:8288131-8288206:-1:exon
so has part: feature:8286679-8286784:-1:exon
so has part: feature:8284470-8284527:-1:exon
so has part: feature:8273537-8273656:-1:exon
so has part: feature:8272810-8272956:-1:exon
so has part: feature:8264438-8264571:-1:exon
so has part: feature:8263958-8264035:-1:exon
so has part: feature:8258898-8258994:-1:exon
so has part: feature:8258114-8258194:-1:exon
so has part: feature:8252141-8257054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8440116-8440684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8416069-8416400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8320116-8320218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8315891-8315992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8314965-8315015:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8310737-8310831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8288131-8288206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8286679-8286784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8284470-8284527:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8273537-8273656:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8272810-8272956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8264438-8264571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8263958-8264035:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8258898-8258994:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8258114-8258194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8252141-8257054:-1:exon

DCLK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: DCLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase DCLK2 isoform X6
translation: MASTRSIELEHFEERDKRPRPGSRRGAPSSSGGSSSSGPKGNGLIPSPAHSAHCSFYRTRTLQALSSEKKAKKARFYRNGDRYFKGLVFAISSDRFRSFDALLMELTRSLSDNVNLPQGVRTIYTIDGSRKVTSLDELLEGESYVCASNEPFRKVDYTKNVNPNWSVNIKGGATRSAPPSSVKSEVKESKDFIKPKLVTVIRSGVKPRKAVRILLNKKTAHSFEQVLTDITEAIKLDSGVVKRLCTLDGKQVTCLQDFFGDDDVFIACGPEKFRYAQDDFVLDHSECRVLKSSYSRSSAVKYSGSKSPGLSRRSKSPASVNGTPSSQLSTPKSTKSSSSSPTSPGSFRGLKVSAHGRSSSNVNGGPEIDRCMSPEGVDGHRCSESTLLEKYKIGKVIGDGNFAVVKECMDRSTGKEFALKIIDKAKCCGKEHLIENEVSILRRVKHPNIIMLIEEMETATELFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANALRYLHALNIVHRDIKPENLLVCEYPDGTKSLKLGDFGLATVVEGPLYTVCGTPTYVAPEIIAETGYGLKVDVWAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDNITDSAKELISQMLQVNVEARCTAGQILSHPWVSDDASQENNMQAEVTGKLKQHFNNALPKQNSTTTGVSVIMFDLTV
SIO_010081: DCLK2
subclass of: SO_0000673
so part of: DCLK2
location: complement(join(8254408..8254425,8256938..8257054,8258114..8258194,8258898..8258994,8263958..8264035,8264438..8264571,8272810..8272956,8273537..8273656,8284470..8284527,8286679..8286784,8288131..8288203,8310737..8310831,8315891..8315992,8320116..8320218,8416069..8416400,8440116..8440536))
location: region:8254408-8440536:-1
so has part: feature:8440116-8440536:-1:exon
so has part: feature:8416069-8416400:-1:exon
so has part: feature:8320116-8320218:-1:exon
so has part: feature:8315891-8315992:-1:exon
so has part: feature:8310737-8310831:-1:exon
so has part: feature:8288131-8288203:-1:exon
so has part: feature:8286679-8286784:-1:exon
so has part: feature:8284470-8284527:-1:exon
so has part: feature:8273537-8273656:-1:exon
so has part: feature:8272810-8272956:-1:exon
so has part: feature:8264438-8264571:-1:exon
so has part: feature:8263958-8264035:-1:exon
so has part: feature:8258898-8258994:-1:exon
so has part: feature:8258114-8258194:-1:exon
so has part: feature:8256938-8257054:-1:exon
so has part: feature:8254408-8254425:-1:exon

XP_019833512.1
type: Protein
SIO_000068: ncbiprotein

position:8254408:-1
position: 8254408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8440536:-1
position: 8440536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8440116-8440536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8416069-8416400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8320116-8320218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8315891-8315992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8310737-8310831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8288131-8288203:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8286679-8286784:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8284470-8284527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8273537-8273656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8272810-8272956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8264438-8264571:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8263958-8264035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8258898-8258994:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8258114-8258194:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8256938-8257054:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8254408-8254425:-1:exon

DCLK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: DCLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase DCLK2 isoform X3
translation: MASTRSIELEHFEERDKRPRPGSRRGAPSSSGGSSSSGPKGNGLIPSPAHSAHCSFYRTRTLQALSSEKKAKKARFYRNGDRYFKGLVFAISSDRFRSFDALLMELTRSLSDNVNLPQGVRTIYTIDGSRKVTSLDELLEGESYVCASNEPFRKVDYTKNVNPNWSVNIKGGATRSAPPSSVKSEVKESKDFIKPKLVTVIRSGVKPRKAVRILLNKKTAHSFEQVLTDITEAIKLDSGVVKRLCTLDGKQVTCLQDFFGDDDVFIACGPEKFRYAQDDFVLDHSECRVLKSSYSRSSAVKYSGSKSPGLSRRSKSPASVKRGGHYSSAYSTARSPVNGTPSSQLSTPKSTKSSSSSPTSPGSFRGLKQVSAHGRSSSNVNGGPEIDRCMSPEGVDGHRCSESTLLEKYKIGKVIGDGNFAVVKECMDRSTGKEFALKIIDKAKCCGKEHLIENEVSILRRVKHPNIIMLIEEMETATELFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANALRYLHALNIVHRDIKPENLLVCEYPDGTKSLKLGDFGLATVVEGPLYTVCGTPTYVAPEIIAETGYGLKVDVWAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDNITDSAKELISQMLQVNVEARCTAGQILSHPWVSDDASQENNMQAEVTGKLKQHFNNALPKQNSTTTGVSVIMFDLTV
SIO_010081: DCLK2
subclass of: SO_0000673
so part of: DCLK2
location: complement(join(8254408..8254425,8256938..8257054,8258114..8258194,8258898..8258994,8263958..8264035,8264438..8264571,8272810..8272956,8273537..8273656,8284470..8284527,8286679..8286784,8288131..8288206,8310737..8310831,8314965..8315015,8315891..8315992,8320116..8320218,8416069..8416400,8440116..8440536))
location: region:8254408-8440536:-1
so has part: feature:8440116-8440536:-1:exon
so has part: feature:8416069-8416400:-1:exon
so has part: feature:8320116-8320218:-1:exon
so has part: feature:8315891-8315992:-1:exon
so has part: feature:8314965-8315015:-1:exon
so has part: feature:8310737-8310831:-1:exon
so has part: feature:8288131-8288206:-1:exon
so has part: feature:8286679-8286784:-1:exon
so has part: feature:8284470-8284527:-1:exon
so has part: feature:8273537-8273656:-1:exon
so has part: feature:8272810-8272956:-1:exon
so has part: feature:8264438-8264571:-1:exon
so has part: feature:8263958-8264035:-1:exon
so has part: feature:8258898-8258994:-1:exon
so has part: feature:8258114-8258194:-1:exon
so has part: feature:8256938-8257054:-1:exon
so has part: feature:8254408-8254425:-1:exon

XP_019833509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8440116-8440536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8416069-8416400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8320116-8320218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8315891-8315992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8314965-8315015:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8310737-8310831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8288131-8288206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8286679-8286784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8284470-8284527:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8273537-8273656:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8272810-8272956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8264438-8264571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8263958-8264035:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8258898-8258994:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8258114-8258194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8256938-8257054:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8254408-8254425:-1:exon

DCLK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: DCLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase DCLK2 isoform X5
translation: MASTRSIELEHFEERDKRPRPGSRRGAPSSSGGSSSSGPKGNGLIPSPAHSAHCSFYRTRTLQALSSEKKAKKARFYRNGDRYFKGLVFAISSDRFRSFDALLMELTRSLSDNVNLPQGVRTIYTIDGSRKVTSLDELLEGESYVCASNEPFRKVDYTKNVNPNWSVNIKGGATRSAPPSSVKSEVKESKDFIKPKLVTVIRSGVKPRKAVRILLNKKTAHSFEQVLTDITEAIKLDSGVVKRLCTLDGKQVTCLQDFFGDDDVFIACGPEKFRYAQDDFVLDHSECRVLKSSYSRSSAVKYSGSKSPGLSRRSKSPASVNGTPSSQLSTPKSTKSSSSSPTSPGSFRGLKVSAHGRSSSNVNGGPEIDRCMSPEGVDGHRCSESTLLEKYKIGKVIGDGNFAVVKECMDRSTGKEFALKIIDKAKCCGKEHLIENEVSILRRVKHPNIIMLIEEMETATELFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANALRYLHALNIVHRDIKPENLLVCEYPDGTKSLKLGDFGLATVVEGPLYTVCGTPTYVAPEIIAETGYGLKVDVWAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDNITDSAKELISQMLQVNVEARCTAGQILSHPWVSDDASQENNMQAEVTGKLKQHFNNALPKQNSTTTGVSVIMVSRACGRPWAAAGAA
SIO_010081: DCLK2
subclass of: SO_0000673
so part of: DCLK2
location: complement(join(8256890..8257054,8258114..8258194,8258898..8258994,8263958..8264035,8264438..8264571,8272810..8272956,8273537..8273656,8284470..8284527,8286679..8286784,8288131..8288203,8310737..8310831,8315891..8315992,8320116..8320218,8416069..8416400,8440116..8440536))
location: region:8256890-8440536:-1
so has part: feature:8440116-8440536:-1:exon
so has part: feature:8416069-8416400:-1:exon
so has part: feature:8320116-8320218:-1:exon
so has part: feature:8315891-8315992:-1:exon
so has part: feature:8310737-8310831:-1:exon
so has part: feature:8288131-8288203:-1:exon
so has part: feature:8286679-8286784:-1:exon
so has part: feature:8284470-8284527:-1:exon
so has part: feature:8273537-8273656:-1:exon
so has part: feature:8272810-8272956:-1:exon
so has part: feature:8264438-8264571:-1:exon
so has part: feature:8263958-8264035:-1:exon
so has part: feature:8258898-8258994:-1:exon
so has part: feature:8258114-8258194:-1:exon
so has part: feature:8256890-8257054:-1:exon

XP_019833511.1
type: Protein
SIO_000068: ncbiprotein

position:8256890:-1
position: 8256890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8440116-8440536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8416069-8416400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8320116-8320218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8315891-8315992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8310737-8310831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8288131-8288203:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8286679-8286784:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8284470-8284527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8273537-8273656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8272810-8272956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8264438-8264571:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8263958-8264035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8258898-8258994:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8258114-8258194:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8256890-8257054:-1:exon

DCLK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: DCLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase DCLK2 isoform X4
translation: MASTRSIELEHFEERDKRPRPGSRRGAPSSSGGSSSSGPKGNGLIPSPAHSAHCSFYRTRTLQALSSEKKAKKARFYRNGDRYFKGLVFAISSDRFRSFDALLMELTRSLSDNVNLPQGVRTIYTIDGSRKVTSLDELLEGESYVCASNEPFRKVDYTKNVNPNWSVNIKGGATRSAPPSSVKSEVKESKDFIKPKLVTVIRSGVKPRKAVRILLNKKTAHSFEQVLTDITEAIKLDSGVVKRLCTLDGKQVTCLQDFFGDDDVFIACGPEKFRYAQDDFVLDHSECRVLKSSYSRSSAVKYSGSKSPGLSRRSKSPASVNGTPSSQLSTPKSTKSSSSSPTSPGSFRGLKQVSAHGRSSSNVNGGPEIDRCMSPEGVDGHRCSESTLLEKYKIGKVIGDGNFAVVKECMDRSTGKEFALKIIDKAKCCGKEHLIENEVSILRRVKHPNIIMLIEEMETATELFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANALRYLHALNIVHRDIKPENLLVCEYPDGTKSLKLGDFGLATVVEGPLYTVCGTPTYVAPEIIAETGYGLKVDVWAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDNITDSAKELISQMLQVNVEARCTAGQILSHPWVSDDASQENNMQAEVTGKLKQHFNNALPKQNSTTTGVSVIMVSRACGRPWAAAGAA
SIO_010081: DCLK2
subclass of: SO_0000673
so part of: DCLK2
location: complement(join(8256890..8257054,8258114..8258194,8258898..8258994,8263958..8264035,8264438..8264571,8272810..8272956,8273537..8273656,8284470..8284527,8286679..8286784,8288131..8288206,8310737..8310831,8315891..8315992,8320116..8320218,8416069..8416400,8440116..8440536))
location: region:8256890-8440536:-1
so has part: feature:8440116-8440536:-1:exon
so has part: feature:8416069-8416400:-1:exon
so has part: feature:8320116-8320218:-1:exon
so has part: feature:8315891-8315992:-1:exon
so has part: feature:8310737-8310831:-1:exon
so has part: feature:8288131-8288206:-1:exon
so has part: feature:8286679-8286784:-1:exon
so has part: feature:8284470-8284527:-1:exon
so has part: feature:8273537-8273656:-1:exon
so has part: feature:8272810-8272956:-1:exon
so has part: feature:8264438-8264571:-1:exon
so has part: feature:8263958-8264035:-1:exon
so has part: feature:8258898-8258994:-1:exon
so has part: feature:8258114-8258194:-1:exon
so has part: feature:8256890-8257054:-1:exon

XP_019833510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8440116-8440536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8416069-8416400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8320116-8320218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8315891-8315992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8310737-8310831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8288131-8288206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8286679-8286784:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8284470-8284527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8273537-8273656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8272810-8272956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8264438-8264571:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8263958-8264035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8258898-8258994:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8258114-8258194:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8256890-8257054:-1:exon

DCLK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: DCLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase DCLK2 isoform X2
translation: MASTRSIELEHFEERDKRPRPGSRRGAPSSSGGSSSSGPKGNGLIPSPAHSAHCSFYRTRTLQALSSEKKAKKARFYRNGDRYFKGLVFAISSDRFRSFDALLMELTRSLSDNVNLPQGVRTIYTIDGSRKVTSLDELLEGESYVCASNEPFRKVDYTKNVNPNWSVNIKGGATRSAPPSSVKSEVKESKDFIKPKLVTVIRSGVKPRKAVRILLNKKTAHSFEQVLTDITEAIKLDSGVVKRLCTLDGKQVTCLQDFFGDDDVFIACGPEKFRYAQDDFVLDHSECRVLKSSYSRSSAVKYSGSKSPGLSRRSKSPASVKRGGHYSSAYSTARSPVNGTPSSQLSTPKSTKSSSSSPTSPGSFRGLKVSAHGRSSSNVNGGPEIDRCMSPEGVDGHRCSESTLLEKYKIGKVIGDGNFAVVKECMDRSTGKEFALKIIDKAKCCGKEHLIENEVSILRRVKHPNIIMLIEEMETATELFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANALRYLHALNIVHRDIKPENLLVCEYPDGTKSLKLGDFGLATVVEGPLYTVCGTPTYVAPEIIAETGYGLKVDVWAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDNITDSAKELISQMLQVNVEARCTAGQILSHPWVSDDASQENNMQAEVTGKLKQHFNNALPKQNSTTTGVSVIMVSRACGRPWAAAGAA
SIO_010081: DCLK2
subclass of: SO_0000673
so part of: DCLK2
location: complement(join(8256890..8257054,8258114..8258194,8258898..8258994,8263958..8264035,8264438..8264571,8272810..8272956,8273537..8273656,8284470..8284527,8286679..8286784,8288131..8288203,8310737..8310831,8314965..8315015,8315891..8315992,8320116..8320218,8416069..8416400,8440116..8440536))
location: region:8256890-8440536:-1
so has part: feature:8440116-8440536:-1:exon
so has part: feature:8416069-8416400:-1:exon
so has part: feature:8320116-8320218:-1:exon
so has part: feature:8315891-8315992:-1:exon
so has part: feature:8314965-8315015:-1:exon
so has part: feature:8310737-8310831:-1:exon
so has part: feature:8288131-8288203:-1:exon
so has part: feature:8286679-8286784:-1:exon
so has part: feature:8284470-8284527:-1:exon
so has part: feature:8273537-8273656:-1:exon
so has part: feature:8272810-8272956:-1:exon
so has part: feature:8264438-8264571:-1:exon
so has part: feature:8263958-8264035:-1:exon
so has part: feature:8258898-8258994:-1:exon
so has part: feature:8258114-8258194:-1:exon
so has part: feature:8256890-8257054:-1:exon

XP_019833508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8440116-8440536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8416069-8416400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8320116-8320218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8315891-8315992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8314965-8315015:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8310737-8310831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8288131-8288203:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8286679-8286784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8284470-8284527:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8273537-8273656:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8272810-8272956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8264438-8264571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8263958-8264035:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8258898-8258994:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8258114-8258194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8256890-8257054:-1:exon

DCLK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: DCLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase DCLK2 isoform X1
translation: MASTRSIELEHFEERDKRPRPGSRRGAPSSSGGSSSSGPKGNGLIPSPAHSAHCSFYRTRTLQALSSEKKAKKARFYRNGDRYFKGLVFAISSDRFRSFDALLMELTRSLSDNVNLPQGVRTIYTIDGSRKVTSLDELLEGESYVCASNEPFRKVDYTKNVNPNWSVNIKGGATRSAPPSSVKSEVKESKDFIKPKLVTVIRSGVKPRKAVRILLNKKTAHSFEQVLTDITEAIKLDSGVVKRLCTLDGKQVTCLQDFFGDDDVFIACGPEKFRYAQDDFVLDHSECRVLKSSYSRSSAVKYSGSKSPGLSRRSKSPASVKRGGHYSSAYSTARSPVNGTPSSQLSTPKSTKSSSSSPTSPGSFRGLKQVSAHGRSSSNVNGGPEIDRCMSPEGVDGHRCSESTLLEKYKIGKVIGDGNFAVVKECMDRSTGKEFALKIIDKAKCCGKEHLIENEVSILRRVKHPNIIMLIEEMETATELFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANALRYLHALNIVHRDIKPENLLVCEYPDGTKSLKLGDFGLATVVEGPLYTVCGTPTYVAPEIIAETGYGLKVDVWAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDNITDSAKELISQMLQVNVEARCTAGQILSHPWVSDDASQENNMQAEVTGKLKQHFNNALPKQNSTTTGVSVIMVSRACGRPWAAAGAA
SIO_010081: DCLK2
subclass of: SO_0000673
so part of: DCLK2
location: complement(join(8256890..8257054,8258114..8258194,8258898..8258994,8263958..8264035,8264438..8264571,8272810..8272956,8273537..8273656,8284470..8284527,8286679..8286784,8288131..8288206,8310737..8310831,8314965..8315015,8315891..8315992,8320116..8320218,8416069..8416400,8440116..8440536))
location: region:8256890-8440536:-1
so has part: feature:8440116-8440536:-1:exon
so has part: feature:8416069-8416400:-1:exon
so has part: feature:8320116-8320218:-1:exon
so has part: feature:8315891-8315992:-1:exon
so has part: feature:8314965-8315015:-1:exon
so has part: feature:8310737-8310831:-1:exon
so has part: feature:8288131-8288206:-1:exon
so has part: feature:8286679-8286784:-1:exon
so has part: feature:8284470-8284527:-1:exon
so has part: feature:8273537-8273656:-1:exon
so has part: feature:8272810-8272956:-1:exon
so has part: feature:8264438-8264571:-1:exon
so has part: feature:8263958-8264035:-1:exon
so has part: feature:8258898-8258994:-1:exon
so has part: feature:8258114-8258194:-1:exon
so has part: feature:8256890-8257054:-1:exon

XP_019833507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8440116-8440536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8416069-8416400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8320116-8320218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8315891-8315992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8314965-8315015:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8310737-8310831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8288131-8288206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8286679-8286784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8284470-8284527:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8273537-8273656:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8272810-8272956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8264438-8264571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8263958-8264035:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8258898-8258994:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8258114-8258194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8256890-8257054:-1:exon

NR3C2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: NR3C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10402455..10841169
location: region:10402455-10841169:1
so has part: feature:10402455-10841169:1:exon
subclass of: SO_0000010

109571245
type: Gene
SIO_000068: ncbigene

position:10402455:1
position: 10402455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10841169:1
position: 10841169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10402455-10841169:1:exon

NR3C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: NR3C2
product: nuclear receptor subfamily 3 group C member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019977558.1
SIO_010081: NR3C2
subclass of: SO_0000673
so part of: NR3C2
location: join(10402455..10402498,10410492..10412256,10515790..10515834,10619541..10619692,10701956..10702072,10745307..10745651,10747373..10747517,10787484..10787614,10797196..10797353,10838403..10841169)
location: region:10402455-10841169:1
so has part: feature:10402455-10402498:1:exon
so has part: feature:10410492-10412256:1:exon
so has part: feature:10515790-10515834:1:exon
so has part: feature:10619541-10619692:1:exon
so has part: feature:10701956-10702072:1:exon
so has part: feature:10745307-10745651:1:exon
so has part: feature:10747373-10747517:1:exon
so has part: feature:10787484-10787614:1:exon
so has part: feature:10797196-10797353:1:exon
so has part: feature:10838403-10841169:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10402455-10402498:1:exon

position:10402498:1
position: 10402498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10410492-10412256:1:exon

position:10410492:1
position: 10410492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10412256:1
position: 10412256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10515790-10515834:1:exon

position:10515790:1
position: 10515790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10515834:1
position: 10515834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10619541-10619692:1:exon

position:10619541:1
position: 10619541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10619692:1
position: 10619692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10701956-10702072:1:exon

position:10701956:1
position: 10701956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10702072:1
position: 10702072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10745307-10745651:1:exon

position:10745307:1
position: 10745307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10745651:1
position: 10745651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10747373-10747517:1:exon

position:10747373:1
position: 10747373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10747517:1
position: 10747517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10787484-10787614:1:exon

position:10787484:1
position: 10787484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10787614:1
position: 10787614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10797196-10797353:1:exon

position:10797196:1
position: 10797196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10797353:1
position: 10797353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10838403-10841169:1:exon

position:10838403:1
position: 10838403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR3C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: NR3C2
product: nuclear receptor subfamily 3 group C member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_019977557.1
SIO_010081: NR3C2
subclass of: SO_0000673
so part of: NR3C2
location: join(10404608..10404854,10410492..10412256,10515790..10515834,10619541..10619692,10701956..10702072,10745307..10745651,10747373..10747517,10787484..10787614,10797196..10797353,10838403..10841169)
location: region:10404608-10841169:1
so has part: feature:10404608-10404854:1:exon
so has part: feature:10410492-10412256:1:exon
so has part: feature:10515790-10515834:1:exon
so has part: feature:10619541-10619692:1:exon
so has part: feature:10701956-10702072:1:exon
so has part: feature:10745307-10745651:1:exon
so has part: feature:10747373-10747517:1:exon
so has part: feature:10787484-10787614:1:exon
so has part: feature:10797196-10797353:1:exon
so has part: feature:10838403-10841169:1:exon

position:10404608:1
position: 10404608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10404608-10404854:1:exon

position:10404854:1
position: 10404854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10410492-10412256:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10515790-10515834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10619541-10619692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10701956-10702072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10745307-10745651:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10747373-10747517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10787484-10787614:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10797196-10797353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10838403-10841169:1:exon

NR3C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: NR3C2
product: nuclear receptor subfamily 3 group C member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_019977560.1
SIO_010081: NR3C2
subclass of: SO_0000673
so part of: NR3C2
location: join(10404608..10404854,10410492..10412256,10619541..10619692,10701956..10702072,10745307..10745651,10747373..10747517,10787484..10787614,10797196..10797353,10838403..10841169)
location: region:10404608-10841169:1
so has part: feature:10404608-10404854:1:exon
so has part: feature:10410492-10412256:1:exon
so has part: feature:10619541-10619692:1:exon
so has part: feature:10701956-10702072:1:exon
so has part: feature:10745307-10745651:1:exon
so has part: feature:10747373-10747517:1:exon
so has part: feature:10787484-10787614:1:exon
so has part: feature:10797196-10797353:1:exon
so has part: feature:10838403-10841169:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10404608-10404854:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10410492-10412256:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10619541-10619692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10701956-10702072:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10745307-10745651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10747373-10747517:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10787484-10787614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10797196-10797353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10838403-10841169:1:exon

NR3C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: NR3C2
product: nuclear receptor subfamily 3 group C member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_019977559.1
SIO_010081: NR3C2
subclass of: SO_0000673
so part of: NR3C2
location: join(10404609..10404854,10410492..10412256,10515790..10515834,10619541..10619680,10701956..10702072,10745307..10745651,10747373..10747517,10787484..10787614,10797196..10797353,10838403..10841169)
location: region:10404609-10841169:1
so has part: feature:10404609-10404854:1:exon
so has part: feature:10410492-10412256:1:exon
so has part: feature:10515790-10515834:1:exon
so has part: feature:10619541-10619680:1:exon
so has part: feature:10701956-10702072:1:exon
so has part: feature:10745307-10745651:1:exon
so has part: feature:10747373-10747517:1:exon
so has part: feature:10787484-10787614:1:exon
so has part: feature:10797196-10797353:1:exon
so has part: feature:10838403-10841169:1:exon

position:10404609:1
position: 10404609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10404609-10404854:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10410492-10412256:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10515790-10515834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10619541-10619680:1:exon

position:10619680:1
position: 10619680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10701956-10702072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10745307-10745651:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10747373-10747517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10787484-10787614:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10797196-10797353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10838403-10841169:1:exon

NR3C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: NR3C2
product: nuclear receptor subfamily 3 group C member 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 152 samples with support for all annotated introns
transcript id: XM_019977561.1
SIO_010081: NR3C2
subclass of: SO_0000673
so part of: NR3C2
location: join(10404609..10404854,10410492..10412256,10619541..10619680,10701956..10702072,10745307..10745651,10747373..10747517,10787484..10787614,10797196..10797353,10838403..10841169)
location: region:10404609-10841169:1
so has part: feature:10404609-10404854:1:exon
so has part: feature:10410492-10412256:1:exon
so has part: feature:10619541-10619680:1:exon
so has part: feature:10701956-10702072:1:exon
so has part: feature:10745307-10745651:1:exon
so has part: feature:10747373-10747517:1:exon
so has part: feature:10787484-10787614:1:exon
so has part: feature:10797196-10797353:1:exon
so has part: feature:10838403-10841169:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10404609-10404854:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10410492-10412256:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10619541-10619680:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10701956-10702072:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10745307-10745651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10747373-10747517:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10787484-10787614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10797196-10797353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10838403-10841169:1:exon

NR3C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: NR3C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mineralocorticoid receptor isoform X1
translation: METKGYHSLPEGLEMERRWGQLSQPAERPALGPVPTEQXDESNYMEIVDVRCVSGAIPNSSTQGSSKEKHELLPCLQQDNSRSGILPSDIKTELESKELSATVAESMGLYMDSVREADYAYDQQNPQGSGSPAKMYQNVEQLVKFYKENGHRPSTLGGASRPLRSFLPDSGGSVNGGVMRNVVKSPILGHEKGPAVCSPLTLSSSGCSPASISCVSSTSASFGSFPVHSPIAQGTPLPCSPNVETRGSRSHSPAHASNVGSPLSSPLSSMKSPISSPPSHCSVKSPVSSPNNVTLRSCVSSPANINNSRCSVSSPSNTNNRSTLSSPAASTVGSICSPGSTAFSYTASGTPVGSSAARDVVPSPDTQEKGAQEVPFPKTEETENAISHGVAGQLNIVQYIKPEPDGAFSSSCLGGNSKINSDSPFSVPIKQESTKHSCSGTSFKGNPAINPFPFMDGSYFSFMDDKDYYSLSGILGPPVPGFDGNCEGSGFPMGIKQEPDDGSFYPEASIPPSAIVGVNSGGQSFHYRIGAQGTISLSRSARDQSFQHLSSFPPVNTLVESWKSHSDLSSRRSDGYPVLEYIPENVSSYGEDKPENSTPLVRCSTLRSVSTGSSRPSKICLVCGDEASGCHYGVVTCGSCKVFFKRAVEGKCSWQHNYLCAGRNDCIIDKIRRKNCPACRLQKCLQAGMNLGARKSKKLGKLKGLHEEQAQQPPPPPPPPQSPEEGTTYIAPAQEPSVNSALVPQLSTISRALTPSPSMILETIEPEIVYAGYDGSKPDTAENLLSTLNRLAGKQMIQVVKWAKVLPGFKNLPLEDQITLIQYSWMCLSSFALSWRSYKHTNSQYLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQLTFEEYTVMKVLLLLSTIPKDGLKSQAAFEEMRTNYIKELRKMVTKCPSNSGQSWQRFYQLTKLLDSMHDLVSDLLEFCFYTFRESQALKVEFPAMLVEIISDQLPKVESGNAKTLYFHRK
SIO_010081: NR3C2
subclass of: SO_0000673
so part of: NR3C2
location: join(10410494..10412256,10515790..10515834,10619541..10619692,10701956..10702072,10745307..10745651,10747373..10747517,10787484..10787614,10797196..10797353,10838403..10838558)
location: region:10410494-10838558:1
so has part: feature:10410494-10412256:1:exon
so has part: feature:10515790-10515834:1:exon
so has part: feature:10619541-10619692:1:exon
so has part: feature:10701956-10702072:1:exon
so has part: feature:10745307-10745651:1:exon
so has part: feature:10747373-10747517:1:exon
so has part: feature:10787484-10787614:1:exon
so has part: feature:10797196-10797353:1:exon
so has part: feature:10838403-10838558:1:exon

XP_019833116.1
type: Protein
SIO_000068: ncbiprotein

position:10410494:1
position: 10410494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10838558:1
position: 10838558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10410494-10412256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10515790-10515834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10619541-10619692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10701956-10702072:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10745307-10745651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10747373-10747517:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10787484-10787614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10797196-10797353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10838403-10838558:1:exon

NR3C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: NR3C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mineralocorticoid receptor isoform X1
translation: METKGYHSLPEGLEMERRWGQLSQPAERPALGPVPTEQXDESNYMEIVDVRCVSGAIPNSSTQGSSKEKHELLPCLQQDNSRSGILPSDIKTELESKELSATVAESMGLYMDSVREADYAYDQQNPQGSGSPAKMYQNVEQLVKFYKENGHRPSTLGGASRPLRSFLPDSGGSVNGGVMRNVVKSPILGHEKGPAVCSPLTLSSSGCSPASISCVSSTSASFGSFPVHSPIAQGTPLPCSPNVETRGSRSHSPAHASNVGSPLSSPLSSMKSPISSPPSHCSVKSPVSSPNNVTLRSCVSSPANINNSRCSVSSPSNTNNRSTLSSPAASTVGSICSPGSTAFSYTASGTPVGSSAARDVVPSPDTQEKGAQEVPFPKTEETENAISHGVAGQLNIVQYIKPEPDGAFSSSCLGGNSKINSDSPFSVPIKQESTKHSCSGTSFKGNPAINPFPFMDGSYFSFMDDKDYYSLSGILGPPVPGFDGNCEGSGFPMGIKQEPDDGSFYPEASIPPSAIVGVNSGGQSFHYRIGAQGTISLSRSARDQSFQHLSSFPPVNTLVESWKSHSDLSSRRSDGYPVLEYIPENVSSYGEDKPENSTPLVRCSTLRSVSTGSSRPSKICLVCGDEASGCHYGVVTCGSCKVFFKRAVEGKCSWQHNYLCAGRNDCIIDKIRRKNCPACRLQKCLQAGMNLGARKSKKLGKLKGLHEEQAQQPPPPPPPPQSPEEGTTYIAPAQEPSVNSALVPQLSTISRALTPSPSMILETIEPEIVYAGYDGSKPDTAENLLSTLNRLAGKQMIQVVKWAKVLPGFKNLPLEDQITLIQYSWMCLSSFALSWRSYKHTNSQYLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQLTFEEYTVMKVLLLLSTIPKDGLKSQAAFEEMRTNYIKELRKMVTKCPSNSGQSWQRFYQLTKLLDSMHDLVSDLLEFCFYTFRESQALKVEFPAMLVEIISDQLPKVESGNAKTLYFHRK
SIO_010081: NR3C2
subclass of: SO_0000673
so part of: NR3C2
location: join(10410494..10412256,10515790..10515834,10619541..10619692,10701956..10702072,10745307..10745651,10747373..10747517,10787484..10787614,10797196..10797353,10838403..10838558)
location: region:10410494-10838558:1
so has part: feature:10410494-10412256:1:exon
so has part: feature:10515790-10515834:1:exon
so has part: feature:10619541-10619692:1:exon
so has part: feature:10701956-10702072:1:exon
so has part: feature:10745307-10745651:1:exon
so has part: feature:10747373-10747517:1:exon
so has part: feature:10787484-10787614:1:exon
so has part: feature:10797196-10797353:1:exon
so has part: feature:10838403-10838558:1:exon

XP_019833117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10410494-10412256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10515790-10515834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10619541-10619692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10701956-10702072:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10745307-10745651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10747373-10747517:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10787484-10787614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10797196-10797353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10838403-10838558:1:exon

NR3C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: NR3C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mineralocorticoid receptor isoform X2
translation: METKGYHSLPEGLEMERRWGQLSQPAERPALGPVPTEQXDESNYMEIVDVRCVSGAIPNSSTQGSSKEKHELLPCLQQDNSRSGILPSDIKTELESKELSATVAESMGLYMDSVREADYAYDQQNPQGSGSPAKMYQNVEQLVKFYKENGHRPSTLGGASRPLRSFLPDSGGSVNGGVMRNVVKSPILGHEKGPAVCSPLTLSSSGCSPASISCVSSTSASFGSFPVHSPIAQGTPLPCSPNVETRGSRSHSPAHASNVGSPLSSPLSSMKSPISSPPSHCSVKSPVSSPNNVTLRSCVSSPANINNSRCSVSSPSNTNNRSTLSSPAASTVGSICSPGSTAFSYTASGTPVGSSAARDVVPSPDTQEKGAQEVPFPKTEETENAISHGVAGQLNIVQYIKPEPDGAFSSSCLGGNSKINSDSPFSVPIKQESTKHSCSGTSFKGNPAINPFPFMDGSYFSFMDDKDYYSLSGILGPPVPGFDGNCEGSGFPMGIKQEPDDGSFYPEASIPPSAIVGVNSGGQSFHYRIGAQGTISLSRSARDQSFQHLSSFPPVNTLVESWKSHSDLSSRRSDGYPVLEYIPENVSSYGEDKPENSTPLVRCSTLRSVSTGSSRPSKICLVCGDEASGCHYGVVTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRLQKCLQAGMNLGARKSKKLGKLKGLHEEQAQQPPPPPPPPQSPEEGTTYIAPAQEPSVNSALVPQLSTISRALTPSPSMILETIEPEIVYAGYDGSKPDTAENLLSTLNRLAGKQMIQVVKWAKVLPGFKNLPLEDQITLIQYSWMCLSSFALSWRSYKHTNSQYLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQLTFEEYTVMKVLLLLSTIPKDGLKSQAAFEEMRTNYIKELRKMVTKCPSNSGQSWQRFYQLTKLLDSMHDLVSDLLEFCFYTFRESQALKVEFPAMLVEIISDQLPKVESGNAKTLYFHRK
SIO_010081: NR3C2
subclass of: SO_0000673
so part of: NR3C2
location: join(10410494..10412256,10515790..10515834,10619541..10619680,10701956..10702072,10745307..10745651,10747373..10747517,10787484..10787614,10797196..10797353,10838403..10838558)
location: region:10410494-10838558:1
so has part: feature:10410494-10412256:1:exon
so has part: feature:10515790-10515834:1:exon
so has part: feature:10619541-10619680:1:exon
so has part: feature:10701956-10702072:1:exon
so has part: feature:10745307-10745651:1:exon
so has part: feature:10747373-10747517:1:exon
so has part: feature:10787484-10787614:1:exon
so has part: feature:10797196-10797353:1:exon
so has part: feature:10838403-10838558:1:exon

XP_019833118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10410494-10412256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10515790-10515834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10619541-10619680:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10701956-10702072:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10745307-10745651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10747373-10747517:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10787484-10787614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10797196-10797353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10838403-10838558:1:exon

NR3C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: NR3C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mineralocorticoid receptor isoform X3
translation: METKGYHSLPEGLEMERRWGQLSQPAERPALGPVPTEQXDESNYMEIVDVRCVSGAIPNSSTQGSSKEKHELLPCLQQDNSRSGILPSDIKTELESKELSATVAESMGLYMDSVREADYAYDQQNPQGSGSPAKMYQNVEQLVKFYKENGHRPSTLGGASRPLRSFLPDSGGSVNGGVMRNVVKSPILGHEKGPAVCSPLTLSSSGCSPASISCVSSTSASFGSFPVHSPIAQGTPLPCSPNVETRGSRSHSPAHASNVGSPLSSPLSSMKSPISSPPSHCSVKSPVSSPNNVTLRSCVSSPANINNSRCSVSSPSNTNNRSTLSSPAASTVGSICSPGSTAFSYTASGTPVGSSAARDVVPSPDTQEKGAQEVPFPKTEETENAISHGVAGQLNIVQYIKPEPDGAFSSSCLGGNSKINSDSPFSVPIKQESTKHSCSGTSFKGNPAINPFPFMDGSYFSFMDDKDYYSLSGILGPPVPGFDGNCEGSGFPMGIKQEPDDGSFYPEASIPPSAIVGVNSGGQSFHYRIGAQGTISLSRSARDQSFQHLSSFPPVNTLVESWKSHSDLSSRRSDGYPVLEYIPENVSSSTLRSVSTGSSRPSKICLVCGDEASGCHYGVVTCGSCKVFFKRAVEGKCSWQHNYLCAGRNDCIIDKIRRKNCPACRLQKCLQAGMNLGARKSKKLGKLKGLHEEQAQQPPPPPPPPQSPEEGTTYIAPAQEPSVNSALVPQLSTISRALTPSPSMILETIEPEIVYAGYDGSKPDTAENLLSTLNRLAGKQMIQVVKWAKVLPGFKNLPLEDQITLIQYSWMCLSSFALSWRSYKHTNSQYLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQLTFEEYTVMKVLLLLSTIPKDGLKSQAAFEEMRTNYIKELRKMVTKCPSNSGQSWQRFYQLTKLLDSMHDLVSDLLEFCFYTFRESQALKVEFPAMLVEIISDQLPKVESGNAKTLYFHRK
SIO_010081: NR3C2
subclass of: SO_0000673
so part of: NR3C2
location: join(10410494..10412256,10619541..10619692,10701956..10702072,10745307..10745651,10747373..10747517,10787484..10787614,10797196..10797353,10838403..10838558)
location: region:10410494-10838558:1
so has part: feature:10410494-10412256:1:exon
so has part: feature:10619541-10619692:1:exon
so has part: feature:10701956-10702072:1:exon
so has part: feature:10745307-10745651:1:exon
so has part: feature:10747373-10747517:1:exon
so has part: feature:10787484-10787614:1:exon
so has part: feature:10797196-10797353:1:exon
so has part: feature:10838403-10838558:1:exon

XP_019833119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10410494-10412256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10619541-10619692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10701956-10702072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10745307-10745651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10747373-10747517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10787484-10787614:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10797196-10797353:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10838403-10838558:1:exon

NR3C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: NR3C2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mineralocorticoid receptor isoform X4
translation: METKGYHSLPEGLEMERRWGQLSQPAERPALGPVPTEQXDESNYMEIVDVRCVSGAIPNSSTQGSSKEKHELLPCLQQDNSRSGILPSDIKTELESKELSATVAESMGLYMDSVREADYAYDQQNPQGSGSPAKMYQNVEQLVKFYKENGHRPSTLGGASRPLRSFLPDSGGSVNGGVMRNVVKSPILGHEKGPAVCSPLTLSSSGCSPASISCVSSTSASFGSFPVHSPIAQGTPLPCSPNVETRGSRSHSPAHASNVGSPLSSPLSSMKSPISSPPSHCSVKSPVSSPNNVTLRSCVSSPANINNSRCSVSSPSNTNNRSTLSSPAASTVGSICSPGSTAFSYTASGTPVGSSAARDVVPSPDTQEKGAQEVPFPKTEETENAISHGVAGQLNIVQYIKPEPDGAFSSSCLGGNSKINSDSPFSVPIKQESTKHSCSGTSFKGNPAINPFPFMDGSYFSFMDDKDYYSLSGILGPPVPGFDGNCEGSGFPMGIKQEPDDGSFYPEASIPPSAIVGVNSGGQSFHYRIGAQGTISLSRSARDQSFQHLSSFPPVNTLVESWKSHSDLSSRRSDGYPVLEYIPENVSSSTLRSVSTGSSRPSKICLVCGDEASGCHYGVVTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRLQKCLQAGMNLGARKSKKLGKLKGLHEEQAQQPPPPPPPPQSPEEGTTYIAPAQEPSVNSALVPQLSTISRALTPSPSMILETIEPEIVYAGYDGSKPDTAENLLSTLNRLAGKQMIQVVKWAKVLPGFKNLPLEDQITLIQYSWMCLSSFALSWRSYKHTNSQYLYFAPDLVFNEEKMHQSAMYELCQGMHQISLQFVRLQLTFEEYTVMKVLLLLSTIPKDGLKSQAAFEEMRTNYIKELRKMVTKCPSNSGQSWQRFYQLTKLLDSMHDLVSDLLEFCFYTFRESQALKVEFPAMLVEIISDQLPKVESGNAKTLYFHRK
SIO_010081: NR3C2
subclass of: SO_0000673
so part of: NR3C2
location: join(10410494..10412256,10619541..10619680,10701956..10702072,10745307..10745651,10747373..10747517,10787484..10787614,10797196..10797353,10838403..10838558)
location: region:10410494-10838558:1
so has part: feature:10410494-10412256:1:exon
so has part: feature:10619541-10619680:1:exon
so has part: feature:10701956-10702072:1:exon
so has part: feature:10745307-10745651:1:exon
so has part: feature:10747373-10747517:1:exon
so has part: feature:10787484-10787614:1:exon
so has part: feature:10797196-10797353:1:exon
so has part: feature:10838403-10838558:1:exon

XP_019833120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10410494-10412256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10619541-10619680:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10701956-10702072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10745307-10745651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10747373-10747517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10787484-10787614:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10797196-10797353:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10838403-10838558:1:exon

ARHGAP10
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ARHGAP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10862640..11274134)
location: region:10862640-11274134:-1
so has part: feature:10862640-11274134:-1:exon
subclass of: SO_0000010

109570857
type: Gene
SIO_000068: ncbigene

position:10862640:-1
position: 10862640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11274134:-1
position: 11274134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10862640-11274134:-1:exon

ARHGAP10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ARHGAP10
product: Rho GTPase activating protein 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 40 ESTs, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019977001.1
SIO_010081: ARHGAP10
subclass of: SO_0000673
so part of: ARHGAP10
location: complement(join(10862640..10863339,10868542..10868633,10869944..10870096,10893073..10893232,10924459..10924606,10973627..10973786,10975175..10975280,10986858..10986967,11067287..11067374,11069453..11069498,11071431..11071512,11104803..11104897,11107614..11107720,11112907..11113036,11117642..11117746,11120229..11120339,11129126..11129227,11149511..11149582,11177984..11178045,11178119..11178214,11273684..11274134))
location: region:10862640-11274134:-1
so has part: feature:11273684-11274134:-1:exon
so has part: feature:11178119-11178214:-1:exon
so has part: feature:11177984-11178045:-1:exon
so has part: feature:11149511-11149582:-1:exon
so has part: feature:11129126-11129227:-1:exon
so has part: feature:11120229-11120339:-1:exon
so has part: feature:11117642-11117746:-1:exon
so has part: feature:11112907-11113036:-1:exon
so has part: feature:11107614-11107720:-1:exon
so has part: feature:11104803-11104897:-1:exon
so has part: feature:11071431-11071512:-1:exon
so has part: feature:11069453-11069498:-1:exon
so has part: feature:11067287-11067374:-1:exon
so has part: feature:10986858-10986967:-1:exon
so has part: feature:10975175-10975280:-1:exon
so has part: feature:10973627-10973786:-1:exon
so has part: feature:10924459-10924606:-1:exon
so has part: feature:10893073-10893232:-1:exon
so has part: feature:10869944-10870096:-1:exon
so has part: feature:10868542-10868633:-1:exon
so has part: feature:10862640-10863339:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11273684-11274134:-1:exon

position:11273684:-1
position: 11273684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11178119-11178214:-1:exon

position:11178119:-1
position: 11178119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11178214:-1
position: 11178214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11177984-11178045:-1:exon

position:11177984:-1
position: 11177984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11178045:-1
position: 11178045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11149511-11149582:-1:exon

position:11149511:-1
position: 11149511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11149582:-1
position: 11149582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11129126-11129227:-1:exon

position:11129126:-1
position: 11129126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11129227:-1
position: 11129227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11120229-11120339:-1:exon

position:11120229:-1
position: 11120229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11120339:-1
position: 11120339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11117642-11117746:-1:exon

position:11117642:-1
position: 11117642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11117746:-1
position: 11117746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11112907-11113036:-1:exon

position:11112907:-1
position: 11112907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11113036:-1
position: 11113036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11107614-11107720:-1:exon

position:11107614:-1
position: 11107614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11107720:-1
position: 11107720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11104803-11104897:-1:exon

position:11104803:-1
position: 11104803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11104897:-1
position: 11104897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11071431-11071512:-1:exon

position:11071431:-1
position: 11071431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11071512:-1
position: 11071512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11069453-11069498:-1:exon

position:11069453:-1
position: 11069453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11069498:-1
position: 11069498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11067287-11067374:-1:exon

position:11067287:-1
position: 11067287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11067374:-1
position: 11067374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:10986858-10986967:-1:exon

position:10986858:-1
position: 10986858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10986967:-1
position: 10986967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:10975175-10975280:-1:exon

position:10975175:-1
position: 10975175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10975280:-1
position: 10975280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:10973627-10973786:-1:exon

position:10973627:-1
position: 10973627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10973786:-1
position: 10973786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:10924459-10924606:-1:exon

position:10924459:-1
position: 10924459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10924606:-1
position: 10924606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:10893073-10893232:-1:exon

position:10893073:-1
position: 10893073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10893232:-1
position: 10893232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:10869944-10870096:-1:exon

position:10869944:-1
position: 10869944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10870096:-1
position: 10870096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:10868542-10868633:-1:exon

position:10868542:-1
position: 10868542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10868633:-1
position: 10868633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:10862640-10863339:-1:exon

position:10863339:-1
position: 10863339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ARHGAP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 10
translation: MGLQPLEFSDCYLDSPWFRERIRAHEAELERTNKFIKELIKDGKNLIAATKTLSAAQRKFAHSLRDFKFEFIGDAETDDERCIDASLREFSNFLKNLEEQREIMALSVTETLIKPLEKFRKEQLGAVKEEKKKFDKETERNYSLIDKHLNLSAKKKDSHLQEADIQVEQNRQHFYELSLEYVCKLQEIQERKKFEFVEPMLSFFQGMFTFYHQGHELAKDFNHYKMELQINIQNTRNRFEGTRSEVEELMNKIRQNPKDHKRASQFTAEGYLYVQEKRPPPFGSSWVKHYCMYRKAAKKFTMIPFEHRSGGKLGDGEVFFLKECIRRHTDSIDRRFCFDVEAADRPGISLTMQAFSEEERKQWLEVLGGKEALFPSFNRAIIPRPEGSAQLDKMGFTILRKCIRAVETRGNMIESFYAKRVDLFGNSELSFPCRSLPEPLMTYELHGDFIVPAKSGSPESRVNAIHFLVHKLPEKNKEMLDILVKHLTNVSNHSKQNLMTVANLGVVFGPTLMRPQEETVAAIMDLKFQNIVVEILIENHEKIFRTPPDATLPEPGPLSAPPNAPPRQSKRQGQRTKRPVAVYNXCLELEDGDRPXLPKEDTPPSSLDSLSSPSPTTATALGHPGPDRNHLLTDGGSFGDWAPTAPSXARSSAVQWLNPQSPTTPSCSPAVTPPSPKLPPVPLSLPATVXDKPPESIISRKARAVYPCEAEHSSELSFEIGAIFEDVQTSREPGWLEGTLNGKRGLIPQNYVKLL
SIO_010081: ARHGAP10
subclass of: SO_0000673
so part of: ARHGAP10
location: complement(join(10863251..10863339,10868542..10868633,10869944..10870096,10893073..10893232,10924459..10924606,10973627..10973786,10975175..10975280,10986858..10986967,11067287..11067374,11069453..11069498,11071431..11071512,11104803..11104897,11107614..11107720,11112907..11113036,11117642..11117746,11120229..11120339,11129126..11129227,11149511..11149582,11177984..11178045,11178119..11178214,11273684..11273837))
location: region:10863251-11273837:-1
so has part: feature:11273684-11273837:-1:exon
so has part: feature:11178119-11178214:-1:exon
so has part: feature:11177984-11178045:-1:exon
so has part: feature:11149511-11149582:-1:exon
so has part: feature:11129126-11129227:-1:exon
so has part: feature:11120229-11120339:-1:exon
so has part: feature:11117642-11117746:-1:exon
so has part: feature:11112907-11113036:-1:exon
so has part: feature:11107614-11107720:-1:exon
so has part: feature:11104803-11104897:-1:exon
so has part: feature:11071431-11071512:-1:exon
so has part: feature:11069453-11069498:-1:exon
so has part: feature:11067287-11067374:-1:exon
so has part: feature:10986858-10986967:-1:exon
so has part: feature:10975175-10975280:-1:exon
so has part: feature:10973627-10973786:-1:exon
so has part: feature:10924459-10924606:-1:exon
so has part: feature:10893073-10893232:-1:exon
so has part: feature:10869944-10870096:-1:exon
so has part: feature:10868542-10868633:-1:exon
so has part: feature:10863251-10863339:-1:exon

XP_019832560.1
type: Protein
SIO_000068: ncbiprotein

position:10863251:-1
position: 10863251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11273837:-1
position: 11273837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11273684-11273837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11178119-11178214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11177984-11178045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11149511-11149582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11129126-11129227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11120229-11120339:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11117642-11117746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11112907-11113036:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11107614-11107720:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11104803-11104897:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11071431-11071512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11069453-11069498:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11067287-11067374:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10986858-10986967:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10975175-10975280:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10973627-10973786:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10924459-10924606:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10893073-10893232:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10869944-10870096:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10868542-10868633:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10863251-10863339:-1:exon

LOC109571038
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11284507..11289286)
location: region:11284507-11289286:-1
so has part: feature:11284507-11289286:-1:exon
subclass of: SO_0000011

109571038
type: Gene
SIO_000068: ncbigene

position:11284507:-1
position: 11284507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11289286:-1
position: 11289286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11284507-11289286:-1:exon

LOC109571038
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109571038
product: uncharacterized LOC109571038
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_002182589.1
SIO_010081: LOC109571038
subclass of: SO_0000673
so part of: LOC109571038
location: complement(join(11284507..11284837,11286605..11286655,11288842..11289286))
location: region:11284507-11289286:-1
so has part: feature:11288842-11289286:-1:exon
so has part: feature:11286605-11286655:-1:exon
so has part: feature:11284507-11284837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11288842-11289286:-1:exon

position:11288842:-1
position: 11288842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11286605-11286655:-1:exon

position:11286605:-1
position: 11286605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11286655:-1
position: 11286655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11284507-11284837:-1:exon

position:11284837:-1
position: 11284837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109571190
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11314119..11322161)
location: region:11314119-11322161:-1
so has part: feature:11314119-11322161:-1:exon
subclass of: SO_0000011

109571190
type: Gene
SIO_000068: ncbigene

position:11314119:-1
position: 11314119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11322161:-1
position: 11322161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11314119-11322161:-1:exon

LOC109571190
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109571190
product: uncharacterized LOC109571190, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002182620.1
SIO_010081: LOC109571190
subclass of: SO_0000673
so part of: LOC109571190
location: complement(join(11314119..11314321,11319515..11319753,11321614..11322161))
location: region:11314119-11322161:-1
so has part: feature:11321614-11322161:-1:exon
so has part: feature:11319515-11319753:-1:exon
so has part: feature:11314119-11314321:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11321614-11322161:-1:exon

position:11321614:-1
position: 11321614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11319515-11319753:-1:exon

position:11319515:-1
position: 11319515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11319753:-1
position: 11319753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11314119-11314321:-1:exon

position:11314321:-1
position: 11314321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109571190
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109571190
product: uncharacterized LOC109571190, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002182619.1
SIO_010081: LOC109571190
subclass of: SO_0000673
so part of: LOC109571190
location: complement(join(11314119..11314321,11319515..11319668,11321614..11322158))
location: region:11314119-11322158:-1
so has part: feature:11321614-11322158:-1:exon
so has part: feature:11319515-11319668:-1:exon
so has part: feature:11314119-11314321:-1:exon

position:11322158:-1
position: 11322158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11321614-11322158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11319515-11319668:-1:exon

position:11319668:-1
position: 11319668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11314119-11314321:-1:exon

PRMT9
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: PRMT9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11322242..11354877
location: region:11322242-11354877:1
so has part: feature:11322242-11354877:1:exon
subclass of: SO_0000010

109571187
type: Gene
SIO_000068: ncbigene

position:11322242:1
position: 11322242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11354877:1
position: 11354877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11322242-11354877:1:exon

PRMT9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: PRMT9
product: protein arginine methyltransferase 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 32 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 218 samples with support for all annotated introns
transcript id: XM_019977447.1
SIO_010081: PRMT9
subclass of: SO_0000673
so part of: PRMT9
location: join(11322242..11322628,11324100..11324248,11326659..11326895,11327419..11327586,11330587..11330689,11331702..11331808,11336869..11337061,11339463..11339646,11342171..11342888,11348569..11348722,11353348..11353470,11353759..11354877)
location: region:11322242-11354877:1
so has part: feature:11322242-11322628:1:exon
so has part: feature:11324100-11324248:1:exon
so has part: feature:11326659-11326895:1:exon
so has part: feature:11327419-11327586:1:exon
so has part: feature:11330587-11330689:1:exon
so has part: feature:11331702-11331808:1:exon
so has part: feature:11336869-11337061:1:exon
so has part: feature:11339463-11339646:1:exon
so has part: feature:11342171-11342888:1:exon
so has part: feature:11348569-11348722:1:exon
so has part: feature:11353348-11353470:1:exon
so has part: feature:11353759-11354877:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11322242-11322628:1:exon

position:11322628:1
position: 11322628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11324100-11324248:1:exon

position:11324100:1
position: 11324100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11324248:1
position: 11324248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11326659-11326895:1:exon

position:11326659:1
position: 11326659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11326895:1
position: 11326895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11327419-11327586:1:exon

position:11327419:1
position: 11327419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11327586:1
position: 11327586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11330587-11330689:1:exon

position:11330587:1
position: 11330587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11330689:1
position: 11330689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11331702-11331808:1:exon

position:11331702:1
position: 11331702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11331808:1
position: 11331808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11336869-11337061:1:exon

position:11336869:1
position: 11336869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11337061:1
position: 11337061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11339463-11339646:1:exon

position:11339463:1
position: 11339463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11339646:1
position: 11339646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11342171-11342888:1:exon

position:11342171:1
position: 11342171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11342888:1
position: 11342888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11348569-11348722:1:exon

position:11348569:1
position: 11348569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11348722:1
position: 11348722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11353348-11353470:1:exon

position:11353348:1
position: 11353348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11353470:1
position: 11353470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11353759-11354877:1:exon

position:11353759:1
position: 11353759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRMT9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: PRMT9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein arginine N-methyltransferase 9
translation: MPNSRPRPRRGAGSGAGAPGRDELVSRSLQSAEHCLGSQDFGTAYAHYLLVLSLAPELKDDVKETFQYTLFRWAEELDALSRTQDLLGCYEQALELFPDDEVICNSMGEHLFRMGFRDEAAGYFHKAVKLNPDFNDAKENFYRVANWLVERWHFIMLNDTKRNTIYNAAIQKAVCSGSKSVLDIGAGTGILSMFARKAGAHSVYACELSKTMYELACDVVAANEMEEGIKLLHMKSLDIKIPKHIPERVSLVVTETVDAGLFGEGIVESLIHAWEHLLLQPKTKGENGDCEKYGKVIPASAVIFGIAVECAEIRRHHRVGVKDVAGISLPTNVKFQSPAYSSVDGEETIEPYTTEKMSRVPGGYLALTECFEIMTVDFNNLQELKSLATKKPDKIGVPVIKEGVLDAIVVWFVLQLDDEHSLSTSPSEETCWEQAVYPVHDLADYWIKLGDEVIMEVSCQDCYLRIQSISVFHSEHEMEVGKSFTRNKDLLSFGNEAELCSALANLQTSKPDVVEQLCVLESTEIALLNNIPYHEGFKMAMKKVLSSLTPEKLGQAMDTQCQNNEMSYESGPSNSDQSTPEPLYVLDVSEGFSVLPVIAGTLGQVKPYSSVEKDQHRATLDIICEANHFPKDTLEFWLRHVEDESAVLQRPKSDKLWSIIILDVIEPSGLIQQEIMEKAAISRCLLQSGGKIFPQYVLMFGLLVESQTLMEESAVQGAERTLGFNIAPFINQFQVPVRVFLDLASLPCIPLSKPVELLRLDLMTPYLNTSNREVKVRICKSGQVTAIPFWYHMYLDDEIRLDTSSEASHWKQAAVVLDNPIQVEMGDELVLSIQHHKSNVSITIKQ
SIO_010081: PRMT9
subclass of: SO_0000673
so part of: PRMT9
location: join(11322440..11322628,11324100..11324248,11326659..11326895,11327419..11327586,11330587..11330689,11331702..11331808,11336869..11337061,11339463..11339646,11342171..11342888,11348569..11348722,11353348..11353470,11353759..11353974)
location: region:11322440-11353974:1
so has part: feature:11322440-11322628:1:exon
so has part: feature:11324100-11324248:1:exon
so has part: feature:11326659-11326895:1:exon
so has part: feature:11327419-11327586:1:exon
so has part: feature:11330587-11330689:1:exon
so has part: feature:11331702-11331808:1:exon
so has part: feature:11336869-11337061:1:exon
so has part: feature:11339463-11339646:1:exon
so has part: feature:11342171-11342888:1:exon
so has part: feature:11348569-11348722:1:exon
so has part: feature:11353348-11353470:1:exon
so has part: feature:11353759-11353974:1:exon

XP_019833006.1
type: Protein
SIO_000068: ncbiprotein

position:11322440:1
position: 11322440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11353974:1
position: 11353974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11322440-11322628:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11324100-11324248:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11326659-11326895:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11327419-11327586:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11330587-11330689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11331702-11331808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11336869-11337061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11339463-11339646:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11342171-11342888:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11348569-11348722:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11353348-11353470:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11353759-11353974:1:exon

TMEM184C
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TMEM184C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11355468..11396161)
location: region:11355468-11396161:-1
so has part: feature:11355468-11396161:-1:exon
subclass of: SO_0000010

109571188
type: Gene
SIO_000068: ncbigene

position:11355468:-1
position: 11355468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11396161:-1
position: 11396161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11355468-11396161:-1:exon

TMEM184C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TMEM184C
product: transmembrane protein 184C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 89 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 256 samples with support for all annotated introns
transcript id: XM_019977448.1
SIO_010081: TMEM184C
subclass of: SO_0000673
so part of: TMEM184C
location: complement(join(11355468..11356211,11356433..11356604,11357120..11357219,11358438..11358550,11361439..11361532,11362995..11363069,11386869..11387074,11387764..11387800,11387921..11388051,11395460..11396161))
location: region:11355468-11396161:-1
so has part: feature:11395460-11396161:-1:exon
so has part: feature:11387921-11388051:-1:exon
so has part: feature:11387764-11387800:-1:exon
so has part: feature:11386869-11387074:-1:exon
so has part: feature:11362995-11363069:-1:exon
so has part: feature:11361439-11361532:-1:exon
so has part: feature:11358438-11358550:-1:exon
so has part: feature:11357120-11357219:-1:exon
so has part: feature:11356433-11356604:-1:exon
so has part: feature:11355468-11356211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11395460-11396161:-1:exon

position:11395460:-1
position: 11395460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11387921-11388051:-1:exon

position:11387921:-1
position: 11387921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11388051:-1
position: 11388051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11387764-11387800:-1:exon

position:11387764:-1
position: 11387764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11387800:-1
position: 11387800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11386869-11387074:-1:exon

position:11386869:-1
position: 11386869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11387074:-1
position: 11387074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11362995-11363069:-1:exon

position:11362995:-1
position: 11362995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11363069:-1
position: 11363069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11361439-11361532:-1:exon

position:11361439:-1
position: 11361439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11361532:-1
position: 11361532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11358438-11358550:-1:exon

position:11358438:-1
position: 11358438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11358550:-1
position: 11358550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11357120-11357219:-1:exon

position:11357120:-1
position: 11357120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11357219:-1
position: 11357219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11356433-11356604:-1:exon

position:11356433:-1
position: 11356433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11356604:-1
position: 11356604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11355468-11356211:-1:exon

position:11356211:-1
position: 11356211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM184C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TMEM184C
product: transmembrane protein 184C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_019977449.1
SIO_010081: TMEM184C
subclass of: SO_0000673
so part of: TMEM184C
location: complement(join(11355478..11356211,11356433..11356604,11357120..11357219,11358438..11358550,11361439..11361532,11362995..11363069,11386869..11387074,11387764..11387800,11387921..11388051,11395273..11395450))
location: region:11355478-11395450:-1
so has part: feature:11395273-11395450:-1:exon
so has part: feature:11387921-11388051:-1:exon
so has part: feature:11387764-11387800:-1:exon
so has part: feature:11386869-11387074:-1:exon
so has part: feature:11362995-11363069:-1:exon
so has part: feature:11361439-11361532:-1:exon
so has part: feature:11358438-11358550:-1:exon
so has part: feature:11357120-11357219:-1:exon
so has part: feature:11356433-11356604:-1:exon
so has part: feature:11355478-11356211:-1:exon

position:11355478:-1
position: 11355478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11395450:-1
position: 11395450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11395273-11395450:-1:exon

position:11395273:-1
position: 11395273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11387921-11388051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11387764-11387800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11386869-11387074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11362995-11363069:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11361439-11361532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11358438-11358550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11357120-11357219:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11356433-11356604:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11355478-11356211:-1:exon

TMEM184C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TMEM184C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 184C isoform X1
translation: MRDEKTAQEQGSALPSTSSFFSFLLGADLCGNMPCTCTWRNWRQWIRPLAVVLYLLSIVVAVPLCVWELQKLEVGIHTKAWFIAGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKYPSIAIYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLIIEAKDQQKHFPPLCCCPPWTMGEVLLFRCKLGVLQYTVVRPFTTIIALVCELLDIYDEGNFSFSNAWTYLVIINNMSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVVIALLVKVGVISEKHTWEWQTVEAVATGLQDFIICIEMFLAAIAHHYTFSYKPYVQEAEEGSCFDSFLAMWDVSDIRDDISEQVRHVGRTVMGHPRKKFFPEDQDQNEHTSLLSSSSQDALSVASSVPPSPVGHYQGFGHTVTPQTTPTTANASDDTGNDAAGXREEPSEKPVAS
SIO_010081: TMEM184C
subclass of: SO_0000673
so part of: TMEM184C
location: complement(join(11355946..11356211,11356433..11356604,11357120..11357219,11358438..11358550,11361439..11361532,11362995..11363069,11386869..11387074,11387764..11387800,11387921..11388051,11395460..11395678))
location: region:11355946-11395678:-1
so has part: feature:11395460-11395678:-1:exon
so has part: feature:11387921-11388051:-1:exon
so has part: feature:11387764-11387800:-1:exon
so has part: feature:11386869-11387074:-1:exon
so has part: feature:11362995-11363069:-1:exon
so has part: feature:11361439-11361532:-1:exon
so has part: feature:11358438-11358550:-1:exon
so has part: feature:11357120-11357219:-1:exon
so has part: feature:11356433-11356604:-1:exon
so has part: feature:11355946-11356211:-1:exon

XP_019833007.1
type: Protein
SIO_000068: ncbiprotein

position:11355946:-1
position: 11355946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11395678:-1
position: 11395678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11395460-11395678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11387921-11388051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11387764-11387800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11386869-11387074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11362995-11363069:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11361439-11361532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11358438-11358550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11357120-11357219:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11356433-11356604:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11355946-11356211:-1:exon

TMEM184C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TMEM184C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 184C isoform X2
translation: MCGFWLFTVFQSMLLVEVGIHTKAWFIAGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKYPSIAIYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLIIEAKDQQKHFPPLCCCPPWTMGEVLLFRCKLGVLQYTVVRPFTTIIALVCELLDIYDEGNFSFSNAWTYLVIINNMSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVVIALLVKVGVISEKHTWEWQTVEAVATGLQDFIICIEMFLAAIAHHYTFSYKPYVQEAEEGSCFDSFLAMWDVSDIRDDISEQVRHVGRTVMGHPRKKFFPEDQDQNEHTSLLSSSSQDALSVASSVPPSPVGHYQGFGHTVTPQTTPTTANASDDTGNDAAGXREEPSEKPVAS
SIO_010081: TMEM184C
subclass of: SO_0000673
so part of: TMEM184C
location: complement(join(11355946..11356211,11356433..11356604,11357120..11357219,11358438..11358550,11361439..11361532,11362995..11363069,11386869..11387074,11387764..11387800,11387921..11388051,11395273..11395323))
location: region:11355946-11395323:-1
so has part: feature:11395273-11395323:-1:exon
so has part: feature:11387921-11388051:-1:exon
so has part: feature:11387764-11387800:-1:exon
so has part: feature:11386869-11387074:-1:exon
so has part: feature:11362995-11363069:-1:exon
so has part: feature:11361439-11361532:-1:exon
so has part: feature:11358438-11358550:-1:exon
so has part: feature:11357120-11357219:-1:exon
so has part: feature:11356433-11356604:-1:exon
so has part: feature:11355946-11356211:-1:exon

XP_019833008.1
type: Protein
SIO_000068: ncbiprotein

position:11395323:-1
position: 11395323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11395273-11395323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11387921-11388051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11387764-11387800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11386869-11387074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11362995-11363069:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11361439-11361532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11358438-11358550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11357120-11357219:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11356433-11356604:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11355946-11356211:-1:exon

EDNRA
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: EDNRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11474583..11548423)
location: region:11474583-11548423:-1
so has part: feature:11474583-11548423:-1:exon
subclass of: SO_0000010

109571433
type: Gene
SIO_000068: ncbigene

position:11474583:-1
position: 11474583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11548423:-1
position: 11548423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11474583-11548423:-1:exon

EDNRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: EDNRA
product: endothelin receptor type A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 43 ESTs, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019977907.1
SIO_010081: EDNRA
subclass of: SO_0000673
so part of: EDNRA
location: complement(join(11474583..11477107,11480817..11480925,11481331..11481464,11486513..11486665,11493696..11493894,11506858..11506985,11543206..11543700,11548033..11548423))
location: region:11474583-11548423:-1
so has part: feature:11548033-11548423:-1:exon
so has part: feature:11543206-11543700:-1:exon
so has part: feature:11506858-11506985:-1:exon
so has part: feature:11493696-11493894:-1:exon
so has part: feature:11486513-11486665:-1:exon
so has part: feature:11481331-11481464:-1:exon
so has part: feature:11480817-11480925:-1:exon
so has part: feature:11474583-11477107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11548033-11548423:-1:exon

position:11548033:-1
position: 11548033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11543206-11543700:-1:exon

position:11543206:-1
position: 11543206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11543700:-1
position: 11543700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11506858-11506985:-1:exon

position:11506858:-1
position: 11506858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11506985:-1
position: 11506985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11493696-11493894:-1:exon

position:11493696:-1
position: 11493696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11493894:-1
position: 11493894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11486513-11486665:-1:exon

position:11486513:-1
position: 11486513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11486665:-1
position: 11486665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11481331-11481464:-1:exon

position:11481331:-1
position: 11481331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11481464:-1
position: 11481464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11480817-11480925:-1:exon

position:11480817:-1
position: 11480817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11480925:-1
position: 11480925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11474583-11477107:-1:exon

position:11477107:-1
position: 11477107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EDNRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: EDNRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelin-1 receptor
translation: METFWLRLSFWVALVGGVISDNPESYSTNLSIHVDSVATFHGTELSFVVTTHQPTNLALPSNGSMHNYCPQQTKITSAFKYINTVISCTIFIVGMVGNATLLRIIYQNKCMRNGPNALIASLALGDLIYVVIDLPINVFKLLAGRWPFEQNDFGVFLCKLFPFLQKSSVGITVLNLCALSVDRYRAVASWSRVQGIGIPLVTAIEIVSIWILSFILAIPEAIGFVMVPFEYKGAQHRTCMLNATSKFMEFYQDVKDWWLFGFYFCMPLVCTAIFYTLMTCEMLNRRNGSLRIALSEHLKQRREVAKTVFCLVVIFALCWFPLHLSRILKKTVYDEMDTNRCELLSFLLLMDYIGINLATMNSCINPIALYFVSKKFKNCFQSCLCCCCYQSKSLMTSVPMNGTSIQWKNHEQNNHNTERSSHKDSIN
SIO_010081: EDNRA
subclass of: SO_0000673
so part of: EDNRA
location: complement(join(11476967..11477107,11480817..11480925,11481331..11481464,11486513..11486665,11493696..11493894,11506858..11506985,11543206..11543625))
location: region:11476967-11543625:-1
so has part: feature:11543206-11543625:-1:exon
so has part: feature:11506858-11506985:-1:exon
so has part: feature:11493696-11493894:-1:exon
so has part: feature:11486513-11486665:-1:exon
so has part: feature:11481331-11481464:-1:exon
so has part: feature:11480817-11480925:-1:exon
so has part: feature:11476967-11477107:-1:exon

XP_019833466.1
type: Protein
SIO_000068: ncbiprotein

position:11476967:-1
position: 11476967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11543625:-1
position: 11543625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11543206-11543625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11506858-11506985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11493696-11493894:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11486513-11486665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11481331-11481464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11480817-11480925:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11476967-11477107:-1:exon

LOC109571563
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11828440..11879724
location: region:11828440-11879724:1
so has part: feature:11828440-11879724:1:exon
subclass of: SO_0000011

109571563
type: Gene
SIO_000068: ncbigene

position:11828440:1
position: 11828440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11879724:1
position: 11879724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11828440-11879724:1:exon

LOC109571563
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109571563
product: uncharacterized LOC109571563
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_002182686.1
SIO_010081: LOC109571563
subclass of: SO_0000673
so part of: LOC109571563
location: join(11828440..11828725,11859095..11859219,11874876..11874945,11877278..11879724)
location: region:11828440-11879724:1
so has part: feature:11828440-11828725:1:exon
so has part: feature:11859095-11859219:1:exon
so has part: feature:11874876-11874945:1:exon
so has part: feature:11877278-11879724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11828440-11828725:1:exon

position:11828725:1
position: 11828725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11859095-11859219:1:exon

position:11859095:1
position: 11859095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11859219:1
position: 11859219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11874876-11874945:1:exon

position:11874876:1
position: 11874876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11874945:1
position: 11874945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11877278-11879724:1:exon

position:11877278:1
position: 11877278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC29
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: TTC29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12236374..12388202
location: region:12236374-12388202:1
so has part: feature:12236374-12388202:1:exon
subclass of: SO_0000010

109570858
type: Gene
SIO_000068: ncbigene

position:12236374:1
position: 12236374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12388202:1
position: 12388202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12236374-12388202:1:exon

TTC29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: TTC29
product: tetratricopeptide repeat domain 29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_019977002.1
SIO_010081: TTC29
subclass of: SO_0000673
so part of: TTC29
location: join(12236374..12236466,12237263..12237309,12243974..12244071,12245887..12245970,12277373..12277596,12283499..12283684,12317792..12318004,12325422..12325507,12361264..12361355,12388028..12388202)
location: region:12236374-12388202:1
so has part: feature:12236374-12236466:1:exon
so has part: feature:12237263-12237309:1:exon
so has part: feature:12243974-12244071:1:exon
so has part: feature:12245887-12245970:1:exon
so has part: feature:12277373-12277596:1:exon
so has part: feature:12283499-12283684:1:exon
so has part: feature:12317792-12318004:1:exon
so has part: feature:12325422-12325507:1:exon
so has part: feature:12361264-12361355:1:exon
so has part: feature:12388028-12388202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12236374-12236466:1:exon

position:12236466:1
position: 12236466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12237263-12237309:1:exon

position:12237263:1
position: 12237263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12237309:1
position: 12237309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12243974-12244071:1:exon

position:12243974:1
position: 12243974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12244071:1
position: 12244071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12245887-12245970:1:exon

position:12245887:1
position: 12245887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12245970:1
position: 12245970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12277373-12277596:1:exon

position:12277373:1
position: 12277373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12277596:1
position: 12277596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12283499-12283684:1:exon

position:12283499:1
position: 12283499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12283684:1
position: 12283684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12317792-12318004:1:exon

position:12317792:1
position: 12317792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12318004:1
position: 12318004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12325422-12325507:1:exon

position:12325422:1
position: 12325422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12325507:1
position: 12325507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12361264-12361355:1:exon

position:12361264:1
position: 12361264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12361355:1
position: 12361355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12388028-12388202:1:exon

position:12388028:1
position: 12388028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: TTC29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 29
translation: MTTLPPLPMTRPKLTALARQKLPCSPRTKPRSELIKEKDDIDHYLEVNFKGLSKEEVAAYRNSYTKNVCVEMLRDGYHKSFTEFFALTEKWDALREAARVRSLSWAQRPLEEQPDKLDHFYYYLTRAETAERKEYFEEVYNNLYALACYFNNSEDKWVRNHFYERCFKIAQVIKIDGGKKEAEAHGHMGLLFEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRVLNLLACESLLRTYRLLSDKMLENKEYKQAIRILIKACEIAKEGNDKKMEGEASYYLGLAHLAAGEYETALAVLNTYGKISADLDDDLSLGRAYEATAKVLQSQGQMAEAVKYLKKVVKIAKNNFQNLDFVRASTMLGDIYNEKVSILCFLLIREKFAEF
SIO_010081: TTC29
subclass of: SO_0000673
so part of: TTC29
location: join(12243980..12244071,12245887..12245970,12277373..12277596,12283499..12283684,12317792..12318004,12325422..12325507,12361264..12361355,12388028..12388202)
location: region:12243980-12388202:1
so has part: feature:12243980-12244071:1:exon
so has part: feature:12245887-12245970:1:exon
so has part: feature:12277373-12277596:1:exon
so has part: feature:12283499-12283684:1:exon
so has part: feature:12317792-12318004:1:exon
so has part: feature:12325422-12325507:1:exon
so has part: feature:12361264-12361355:1:exon
so has part: feature:12388028-12388202:1:exon

XP_019832561.1
type: Protein
SIO_000068: ncbiprotein

position:12243980:1
position: 12243980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12243980-12244071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12245887-12245970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12277373-12277596:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12283499-12283684:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12317792-12318004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12325422-12325507:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12361264-12361355:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12388028-12388202:1:exon

LOC109571492
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12519093..12520500)
location: region:12519093-12520500:-1
so has part: feature:12519093-12520500:-1:exon
subclass of: SO_0000010

109571492
type: Gene
SIO_000068: ncbigene

position:12519093:-1
position: 12519093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12520500:-1
position: 12520500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12519093-12520500:-1:exon

LOC109571492
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109571492
product: E3 ubiquitin-protein ligase RNF146-A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 15 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019978011.1
SIO_010081: LOC109571492
subclass of: SO_0000673
so part of: LOC109571492
location: complement(12519093..12520500)
location: region:12519093-12520500:-1
so has part: feature:12519093-12520500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12519093-12520500:-1:exon

LOC109571492
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109571492
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(12520465..12520467), aa:OTHER)
product: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF146-A-like
translation: MMAGCXETDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFLFRPTLLSPELKAASRGNGEYAWYYEGRNGWWQYDERTSRELEDAFSKGKKSTEMLIAGFLYVADLENMVQYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNLARESSADGADSVPAQSGASVQSSSVRPLTSVDGQLTSPATPSPDVGTSLEDSFAHLQLGGDSIVERSHRGEGEEEHESPSSGRVPAPDTSIEETESDASSDSEDVSALVAQHSLTQQRLLVPNPSQTVSDRSVAAGGIVSVRSRRPDGQCTVTEV
SIO_010081: LOC109571492
subclass of: SO_0000673
so part of: LOC109571492
location: complement(12519442..12520482)
location: region:12519442-12520482:-1
so has part: feature:12519442-12520482:-1:exon

XP_019833570.1
type: Protein
SIO_000068: ncbiprotein

position:12519442:-1
position: 12519442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12520482:-1
position: 12520482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12519442-12520482:-1:exon

POU4F2
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: POU4F2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12577348..12580977)
location: region:12577348-12580977:-1
so has part: feature:12577348-12580977:-1:exon
subclass of: SO_0000010

109571037
type: Gene
SIO_000068: ncbigene

position:12577348:-1
position: 12577348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12580977:-1
position: 12580977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12577348-12580977:-1:exon

POU4F2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: POU4F2
product: POU class 4 homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 2 ESTs, 11 Proteins
transcript id: XM_019977157.1
SIO_010081: POU4F2
subclass of: SO_0000673
so part of: POU4F2
location: complement(join(12577348..12580000,12580449..12580977))
location: region:12577348-12580977:-1
so has part: feature:12580449-12580977:-1:exon
so has part: feature:12577348-12580000:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12580449-12580977:-1:exon

position:12580449:-1
position: 12580449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12577348-12580000:-1:exon

position:12580000:-1
position: 12580000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POU4F2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: POU4F2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 4, transcription factor 2
translation: MMMMSLNSKQAFSMPHGGSLHVEPKYSALHSASPGSSAPAAPSASSPSSSSNAGGGGGSGGGGGGRSSSSSSSGSSGGSGGGSEAMRRACLPTPPSNIFGGLDESLLARAEALAAVDIVSQSKSHHHHPPHHSPFKPDATYHTMNTIPCTSAASSSSVPISHPSALAGTHHHHHHHHHHHHQPHQALEGELLEHLSPGLALGAMAGPDGAVVSTPAHAPHMATMNPMHQAALSMAHAHGLPSHMGCMSDVDADPRDLEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSGKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAGI
SIO_010081: POU4F2
subclass of: SO_0000673
so part of: POU4F2
location: complement(join(12579059..12580000,12580449..12580733))
location: region:12579059-12580733:-1
so has part: feature:12580449-12580733:-1:exon
so has part: feature:12579059-12580000:-1:exon

XP_019832716.1
type: Protein
SIO_000068: ncbiprotein

position:12579059:-1
position: 12579059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12580733:-1
position: 12580733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12580449-12580733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12579059-12580000:-1:exon

SLC10A7
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: SLC10A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12672205..12939171
location: region:12672205-12939171:1
so has part: feature:12672205-12939171:1:exon
subclass of: SO_0000010

109571412
type: Gene
SIO_000068: ncbigene

position:12672205:1
position: 12672205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12939171:1
position: 12939171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12672205-12939171:1:exon

SLC10A7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SLC10A7
product: solute carrier family 10 member 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019977870.1
SIO_010081: SLC10A7
subclass of: SO_0000673
so part of: SLC10A7
location: join(12672205..12672562,12680085..12680167,12699193..12699268,12820875..12823014)
location: region:12672205-12823014:1
so has part: feature:12672205-12672562:1:exon
so has part: feature:12680085-12680167:1:exon
so has part: feature:12699193-12699268:1:exon
so has part: feature:12820875-12823014:1:exon

position:12823014:1
position: 12823014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12672205-12672562:1:exon

position:12672562:1
position: 12672562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12680085-12680167:1:exon

position:12680085:1
position: 12680085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12680167:1
position: 12680167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12699193-12699268:1:exon

position:12699193:1
position: 12699193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12699268:1
position: 12699268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12820875-12823014:1:exon

position:12820875:1
position: 12820875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC10A7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SLC10A7
product: solute carrier family 10 member 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019977871.1
SIO_010081: SLC10A7
subclass of: SO_0000673
so part of: SLC10A7
location: join(12672216..12672562,12680085..12680167,12690471..12690607,12699193..12699268,12820875..12820913,12838693..12838703,12883953..12884061,12893126..12893291,12894259..12894310,12905147..12905220,12932871..12933016,12936631..12939171)
location: region:12672216-12939171:1
so has part: feature:12672216-12672562:1:exon
so has part: feature:12680085-12680167:1:exon
so has part: feature:12690471-12690607:1:exon
so has part: feature:12699193-12699268:1:exon
so has part: feature:12820875-12820913:1:exon
so has part: feature:12838693-12838703:1:exon
so has part: feature:12883953-12884061:1:exon
so has part: feature:12893126-12893291:1:exon
so has part: feature:12894259-12894310:1:exon
so has part: feature:12905147-12905220:1:exon
so has part: feature:12932871-12933016:1:exon
so has part: feature:12936631-12939171:1:exon

position:12672216:1
position: 12672216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12672216-12672562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12680085-12680167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12690471-12690607:1:exon

position:12690471:1
position: 12690471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12690607:1
position: 12690607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12699193-12699268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12820875-12820913:1:exon

position:12820913:1
position: 12820913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12838693-12838703:1:exon

position:12838693:1
position: 12838693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12838703:1
position: 12838703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12883953-12884061:1:exon

position:12883953:1
position: 12883953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12884061:1
position: 12884061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12893126-12893291:1:exon

position:12893126:1
position: 12893126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12893291:1
position: 12893291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12894259-12894310:1:exon

position:12894259:1
position: 12894259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12894310:1
position: 12894310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12905147-12905220:1:exon

position:12905147:1
position: 12905147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12905220:1
position: 12905220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12932871-12933016:1:exon

position:12932871:1
position: 12932871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12933016:1
position: 12933016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:12936631-12939171:1:exon

position:12936631:1
position: 12936631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC10A7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SLC10A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/bile acid cotransporter 7 isoform X2
translation: MRLLERMRKEWFMIGIVLAIAGAKLEPSIGMNGGPLKPEITVSYIAVATIFFNSGLSLNTEELTSALVHIKLHLFIQIFTLAFFPAAVWLFLQLLSITPINEWLLKGLQTVGCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLNIVISSYILVLQLGSSSSVPFTSIFSQLFMTVVVPLIIGQIVRRYIKDWLERKQPPFGAVSSSVLLMIIYTTFCDTFSNPSIDLDKFSLLLVLFIICSIQLSFMLLTFVYSTRNNSGFTPADTVAVMFCSTHKSLTLGIPMLKIVFAGHEYLSLISVPLLIYHPVQILLGSVLVPTIKSWMVSRQKGVKLMRPTV
SIO_010081: SLC10A7
subclass of: SO_0000673
so part of: SLC10A7
location: join(12672463..12672562,12680085..12680167,12690471..12690607,12699193..12699268,12820875..12820913,12838693..12838703,12883953..12884061,12893126..12893291,12894259..12894310,12905147..12905220,12932871..12933016,12936631..12936660)
location: region:12672463-12936660:1
so has part: feature:12672463-12672562:1:exon
so has part: feature:12680085-12680167:1:exon
so has part: feature:12690471-12690607:1:exon
so has part: feature:12699193-12699268:1:exon
so has part: feature:12820875-12820913:1:exon
so has part: feature:12838693-12838703:1:exon
so has part: feature:12883953-12884061:1:exon
so has part: feature:12893126-12893291:1:exon
so has part: feature:12894259-12894310:1:exon
so has part: feature:12905147-12905220:1:exon
so has part: feature:12932871-12933016:1:exon
so has part: feature:12936631-12936660:1:exon

XP_019833430.1
type: Protein
SIO_000068: ncbiprotein

position:12672463:1
position: 12672463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12936660:1
position: 12936660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12672463-12672562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12680085-12680167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12690471-12690607:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12699193-12699268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12820875-12820913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12838693-12838703:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12883953-12884061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12893126-12893291:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12894259-12894310:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12905147-12905220:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12932871-12933016:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12936631-12936660:1:exon

SLC10A7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SLC10A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/bile acid cotransporter 7 isoform X1
translation: MRLLERMRKEWFMIGIVLAIAGAKLEPSIGMNGGPLKPEITVSYIAVATIFFNSGLSLNTEVADSRLHASACVFCGDINQGSWWKRGSCNI
SIO_010081: SLC10A7
subclass of: SO_0000673
so part of: SLC10A7
location: join(12672463..12672562,12680085..12680167,12699193..12699268,12820875..12820891)
location: region:12672463-12820891:1
so has part: feature:12672463-12672562:1:exon
so has part: feature:12680085-12680167:1:exon
so has part: feature:12699193-12699268:1:exon
so has part: feature:12820875-12820891:1:exon

XP_019833429.1
type: Protein
SIO_000068: ncbiprotein

position:12820891:1
position: 12820891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12672463-12672562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12680085-12680167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12699193-12699268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12820875-12820891:1:exon

LOC109570859
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109570859
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12961835..12976419)
location: region:12961835-12976419:-1
so has part: feature:12961835-12976419:-1:exon
subclass of: SO_0000010

109570859
type: Gene
SIO_000068: ncbigene

position:12961835:-1
position: 12961835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12976419:-1
position: 12976419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12961835-12976419:-1:exon

LOC109570859
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LOC109570859
product: uncharacterized LOC109570859
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019977003.1
SIO_010081: LOC109570859
subclass of: SO_0000673
so part of: LOC109570859
location: complement(join(12961835..12963816,12964645..12964708,12966128..12966470,12969973..12970136,12973343..12973565,12976212..12976419))
location: region:12961835-12976419:-1
so has part: feature:12976212-12976419:-1:exon
so has part: feature:12973343-12973565:-1:exon
so has part: feature:12969973-12970136:-1:exon
so has part: feature:12966128-12966470:-1:exon
so has part: feature:12964645-12964708:-1:exon
so has part: feature:12961835-12963816:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12976212-12976419:-1:exon

position:12976212:-1
position: 12976212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12973343-12973565:-1:exon

position:12973343:-1
position: 12973343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12973565:-1
position: 12973565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12969973-12970136:-1:exon

position:12969973:-1
position: 12969973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12970136:-1
position: 12970136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12966128-12966470:-1:exon

position:12966128:-1
position: 12966128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12966470:-1
position: 12966470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12964645-12964708:-1:exon

position:12964645:-1
position: 12964645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12964708:-1
position: 12964708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12961835-12963816:-1:exon

position:12963816:-1
position: 12963816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109570859
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LOC109570859
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109570859
translation: MGVPAALTGWACAALCLVPGSSAFSHGAGAVACADMRPKHIPARTQSPGTHHITVLTGSSSYSAGATVSVAVRSSRDFMGFLLQARRVSDHQIAGTFVSIPPHSKLITCFEEADTVTHADKSRKRNLSFEWRAPAQPVGNIRFFLSVVQSYFVYWVKIESSVVYQQTHSRAHSDSHVEPGSPMPASGQRLDNMEGAIPVSLGLHLAPSLPITLQQRTDVSATAVTGAGEEDSLDPVPISVGVTEFLGAAETPFQASSHTAAVVSDGHHPSRDSSPTLEPSLEPSLGVRGLERLVALRGFSAESFASXFSTCHRTQNDPSFDSLETCLPSDRDEQDKMKASNRTVMRPPXYTVHLPHPHLWSSRALTGHGAGAAQPTPALHTSATSRPTTADGQLEASRPSASFLPRSKHKERGVEEGNGAAGVGDPRKTNLRPELGQDGARAPWGXXLRTLQLGILLCLLAVLGMAVVVGXRYLHAQSCRRQMEVSFCEPAGDAVATXDGGETVHVRRIGDNSFVLVEGECNWVAPSVGSKKTVX
SIO_010081: LOC109570859
subclass of: SO_0000673
so part of: LOC109570859
location: complement(join(12963211..12963816,12964645..12964708,12966128..12966470,12969973..12970136,12973343..12973565,12976212..12976419))
location: region:12963211-12976419:-1
so has part: feature:12976212-12976419:-1:exon
so has part: feature:12973343-12973565:-1:exon
so has part: feature:12969973-12970136:-1:exon
so has part: feature:12966128-12966470:-1:exon
so has part: feature:12964645-12964708:-1:exon
so has part: feature:12963211-12963816:-1:exon

XP_019832562.1
type: Protein
SIO_000068: ncbiprotein

position:12963211:-1
position: 12963211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12976212-12976419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12973343-12973565:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12969973-12970136:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12966128-12966470:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12964645-12964708:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12963211-12963816:-1:exon

LSM6
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LSM6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13009094..13090712)
location: region:13009094-13090712:-1
so has part: feature:13009094-13090712:-1:exon
subclass of: SO_0000010

109571462
type: Gene
SIO_000068: ncbigene

position:13009094:-1
position: 13009094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13090712:-1
position: 13090712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13009094-13090712:-1:exon

LSM6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: LSM6
product: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 264 samples with support for all annotated introns
transcript id: XM_019977958.1
SIO_010081: LSM6
subclass of: SO_0000673
so part of: LSM6
location: complement(join(13009094..13009498,13012488..13012601,13015939..13016054,13090609..13090712))
location: region:13009094-13090712:-1
so has part: feature:13090609-13090712:-1:exon
so has part: feature:13015939-13016054:-1:exon
so has part: feature:13012488-13012601:-1:exon
so has part: feature:13009094-13009498:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13090609-13090712:-1:exon

position:13090609:-1
position: 13090609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13015939-13016054:-1:exon

position:13015939:-1
position: 13015939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13016054:-1
position: 13016054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13012488-13012601:-1:exon

position:13012488:-1
position: 13012488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13012601:-1
position: 13012601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13009094-13009498:-1:exon

position:13009498:-1
position: 13009498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LSM6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: LSM6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U6 snRNA-associated Sm-like protein LSm6
translation: MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRRM
SIO_010081: LSM6
subclass of: SO_0000673
so part of: LSM6
location: complement(join(13009464..13009498,13012488..13012601,13015939..13016032))
location: region:13009464-13016032:-1
so has part: feature:13015939-13016032:-1:exon
so has part: feature:13012488-13012601:-1:exon
so has part: feature:13009464-13009498:-1:exon

XP_019833517.1
type: Protein
SIO_000068: ncbiprotein

position:13009464:-1
position: 13009464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13016032:-1
position: 13016032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13015939-13016032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13012488-13012601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13009464-13009498:-1:exon

ZNF827
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: ZNF827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13333075..13526117
location: region:13333075-13526117:1
so has part: feature:13333075-13526117:1:exon
subclass of: SO_0000010

109571381
type: Gene
SIO_000068: ncbigene

position:13333075:1
position: 13333075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13526117:1
position: 13526117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13333075-13526117:1:exon

ZNF827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF827
product: zinc finger protein 827, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 32 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_019977812.1
SIO_010081: ZNF827
subclass of: SO_0000673
so part of: ZNF827
location: join(13333075..13333663,13369341..13370393,13381365..13381537,13387267..13387747,13406646..13406879,13434792..13435031,13437443..13437497,13455393..13455496,13501734..13501871,13505589..13505760,13506583..13506749,13517980..13518171,13518539..13518716,13520712..13520744,13522212..13526117)
location: region:13333075-13526117:1
so has part: feature:13333075-13333663:1:exon
so has part: feature:13369341-13370393:1:exon
so has part: feature:13381365-13381537:1:exon
so has part: feature:13387267-13387747:1:exon
so has part: feature:13406646-13406879:1:exon
so has part: feature:13434792-13435031:1:exon
so has part: feature:13437443-13437497:1:exon
so has part: feature:13455393-13455496:1:exon
so has part: feature:13501734-13501871:1:exon
so has part: feature:13505589-13505760:1:exon
so has part: feature:13506583-13506749:1:exon
so has part: feature:13517980-13518171:1:exon
so has part: feature:13518539-13518716:1:exon
so has part: feature:13520712-13520744:1:exon
so has part: feature:13522212-13526117:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13333075-13333663:1:exon

position:13333663:1
position: 13333663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13369341-13370393:1:exon

position:13369341:1
position: 13369341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13370393:1
position: 13370393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13381365-13381537:1:exon

position:13381365:1
position: 13381365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13381537:1
position: 13381537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13387267-13387747:1:exon

position:13387267:1
position: 13387267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13387747:1
position: 13387747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13406646-13406879:1:exon

position:13406646:1
position: 13406646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13406879:1
position: 13406879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13434792-13435031:1:exon

position:13434792:1
position: 13434792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13435031:1
position: 13435031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13437443-13437497:1:exon

position:13437443:1
position: 13437443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13437497:1
position: 13437497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13455393-13455496:1:exon

position:13455393:1
position: 13455393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13455496:1
position: 13455496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:13501734-13501871:1:exon

position:13501734:1
position: 13501734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13501871:1
position: 13501871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13505589-13505760:1:exon

position:13505589:1
position: 13505589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13505760:1
position: 13505760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13506583-13506749:1:exon

position:13506583:1
position: 13506583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13506749:1
position: 13506749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:13517980-13518171:1:exon

position:13517980:1
position: 13517980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13518171:1
position: 13518171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:13518539-13518716:1:exon

position:13518539:1
position: 13518539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13518716:1
position: 13518716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13520712-13520744:1:exon

position:13520712:1
position: 13520712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13520744:1
position: 13520744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:13522212-13526117:1:exon

position:13522212:1
position: 13522212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF827
product: zinc finger protein 827, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 34 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019977811.1
SIO_010081: ZNF827
subclass of: SO_0000673
so part of: ZNF827
location: join(13333142..13333663,13369341..13370393,13381365..13381537,13387267..13387747,13406646..13406879,13434792..13435031,13437443..13437497,13455393..13455496,13501734..13501871,13505589..13505760,13506583..13506749,13517980..13518171,13518539..13518716,13522212..13526117)
location: region:13333142-13526117:1
so has part: feature:13333142-13333663:1:exon
so has part: feature:13369341-13370393:1:exon
so has part: feature:13381365-13381537:1:exon
so has part: feature:13387267-13387747:1:exon
so has part: feature:13406646-13406879:1:exon
so has part: feature:13434792-13435031:1:exon
so has part: feature:13437443-13437497:1:exon
so has part: feature:13455393-13455496:1:exon
so has part: feature:13501734-13501871:1:exon
so has part: feature:13505589-13505760:1:exon
so has part: feature:13506583-13506749:1:exon
so has part: feature:13517980-13518171:1:exon
so has part: feature:13518539-13518716:1:exon
so has part: feature:13522212-13526117:1:exon

position:13333142:1
position: 13333142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13333142-13333663:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13369341-13370393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13381365-13381537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13387267-13387747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13406646-13406879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13434792-13435031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13437443-13437497:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13455393-13455496:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13501734-13501871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13505589-13505760:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13506583-13506749:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13517980-13518171:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13518539-13518716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13522212-13526117:1:exon

ZNF827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: ZNF827
product: zinc finger protein 827, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019977813.1
SIO_010081: ZNF827
subclass of: SO_0000673
so part of: ZNF827
location: join(13333142..13333663,13369341..13370393,13381365..13381537,13387267..13387747,13406646..13406879,13434792..13435031,13437443..13437497,13455393..13455496,13501734..13501871,13505589..13505760,13506583..13506749,13517980..13518171,13518539..13518729,13520712..13520744,13522212..13522267)
location: region:13333142-13522267:1
so has part: feature:13333142-13333663:1:exon
so has part: feature:13369341-13370393:1:exon
so has part: feature:13381365-13381537:1:exon
so has part: feature:13387267-13387747:1:exon
so has part: feature:13406646-13406879:1:exon
so has part: feature:13434792-13435031:1:exon
so has part: feature:13437443-13437497:1:exon
so has part: feature:13455393-13455496:1:exon
so has part: feature:13501734-13501871:1:exon
so has part: feature:13505589-13505760:1:exon
so has part: feature:13506583-13506749:1:exon
so has part: feature:13517980-13518171:1:exon
so has part: feature:13518539-13518729:1:exon
so has part: feature:13520712-13520744:1:exon
so has part: feature:13522212-13522267:1:exon

position:13522267:1
position: 13522267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13333142-13333663:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13369341-13370393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13381365-13381537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13387267-13387747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13406646-13406879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13434792-13435031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13437443-13437497:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13455393-13455496:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13501734-13501871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13505589-13505760:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13506583-13506749:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13517980-13518171:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13518539-13518729:1:exon

position:13518729:1
position: 13518729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:13520712-13520744:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:13522212-13522267:1:exon

ZNF827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 827 isoform X1
translation: MPRRKQEQPKRLPSHVSRQDEAEGELSEGEHWYGNSSETPSEASYGEVQENYKLCLEDRIQEQSTSPDTSLGSATPSSHTLELVALDGEVLRDPLQCPDHLSPGVSSLCEEDHPGSTKPLSSNLRRLLEAGSLKLDAAATANGRVESPVNAGSNLSFSPPSHHAQQLSVLARKLAEKQEQNDQYPPSNRFLWNQGKWLPNSTTTCDLSPDSAILKLKAAANAVLQDKSLTRTEETVRFESFSSPFSSQSASSTLAALSKKVSERSLTPGQEHPPPASSFLSLASMTSSAALLKEVAARAAGTLLAEKSSLVPEDPLPPPPSEKKQEKVTPPPPPPPPPPPPPPPQSLELLLLPVPKGRVSKPSNSASEEESGKPFQCPICGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCQLCPFTSSRHFSLKLHMRCHQHFLRTEAKVKEEXPDPEXKGPPHLSDSACLGQQREGGGTELVGTMMKSSTPERTSQGGAGVSPLLVKEEPKEDNGLPTSFPLNATDRPANHTKLREPSEFAANSASALFSQDISVKMASDFLMKLSAANQKEPMNLNFKIKEEPKEEETLSVTLPRSSYVFSPESEVSAASISEDTLKPQEAKGNVLRRDMSVKAASELLMKLSAESYKDTQMVKIKEEPMEVDIQDSQVSISPSCNVGYSTLIGREKTEPLQKLPEGRVXPERNLFSQDISVKMASELLFQLSEKVSKEHTQKENTIRTTTSPFFSEDTFRQSPFTSNSKDLLPSESVLHGRISAPETEKIVLEAGNGLPSWKFNDQLFPCDVCGKVFGRQQTLSRHLSLHTEERKYKCHLCPYAAKCRANLNQHLTVHSVKLVSTDTEDIVSAVTSEGSDGKKHPYYYSCHVCGFETELNVQFVSHMSLHVDKEQWMFSICCTACDFVTMEEAEIKAHIGTKHTGEDRKTPSESNSPSSSSLSALSDSANSRDDSDSSQKNKSGSNLLVISVMPGSQPSLNSEEKPEKGFECVFCNFVCKTKNMFERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPTGGLKCPFCIYSTNRPAAMECHVKTHYKMEYKCRICQTVKANQLELETHTRAHRLGNHYKCDQCGYLSKTANKLIEHVRVHTGERPFHCDQCSYSCKRKDNLNLHKKLKHAPRQTFSCEECLFKTTHPFVFSRHVKKHQSADSPEEDKKGPAPASQDAGGPGAPLLVVGSARHLLSPLSVMSASHALQTVALSAAHSGGGGGSEPNLALKAMPLNGSPLRFDKYRNSDFAHLIPLTMLYPKNQLDLTFHPPRPQTAPPSIPSPKHSFLAYLGLRERAETV
SIO_010081: ZNF827
subclass of: SO_0000673
so part of: ZNF827
location: join(13333621..13333663,13369341..13370393,13381365..13381537,13387267..13387747,13406646..13406879,13434792..13435031,13437443..13437497,13455393..13455496,13501734..13501871,13505589..13505760,13506583..13506749,13517980..13518171,13518539..13518716,13522212..13523040)
location: region:13333621-13523040:1
so has part: feature:13333621-13333663:1:exon
so has part: feature:13369341-13370393:1:exon
so has part: feature:13381365-13381537:1:exon
so has part: feature:13387267-13387747:1:exon
so has part: feature:13406646-13406879:1:exon
so has part: feature:13434792-13435031:1:exon
so has part: feature:13437443-13437497:1:exon
so has part: feature:13455393-13455496:1:exon
so has part: feature:13501734-13501871:1:exon
so has part: feature:13505589-13505760:1:exon
so has part: feature:13506583-13506749:1:exon
so has part: feature:13517980-13518171:1:exon
so has part: feature:13518539-13518716:1:exon
so has part: feature:13522212-13523040:1:exon

XP_019833370.1
type: Protein
SIO_000068: ncbiprotein

position:13333621:1
position: 13333621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13523040:1
position: 13523040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13333621-13333663:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13369341-13370393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13381365-13381537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13387267-13387747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13406646-13406879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13434792-13435031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13437443-13437497:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13455393-13455496:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13501734-13501871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13505589-13505760:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13506583-13506749:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13517980-13518171:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13518539-13518716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13522212-13523040:1:exon

ZNF827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 827 isoform X2
translation: MPRRKQEQPKRLPSHVSRQDEAEGELSEGEHWYGNSSETPSEASYGEVQENYKLCLEDRIQEQSTSPDTSLGSATPSSHTLELVALDGEVLRDPLQCPDHLSPGVSSLCEEDHPGSTKPLSSNLRRLLEAGSLKLDAAATANGRVESPVNAGSNLSFSPPSHHAQQLSVLARKLAEKQEQNDQYPPSNRFLWNQGKWLPNSTTTCDLSPDSAILKLKAAANAVLQDKSLTRTEETVRFESFSSPFSSQSASSTLAALSKKVSERSLTPGQEHPPPASSFLSLASMTSSAALLKEVAARAAGTLLAEKSSLVPEDPLPPPPSEKKQEKVTPPPPPPPPPPPPPPPQSLELLLLPVPKGRVSKPSNSASEEESGKPFQCPICGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCQLCPFTSSRHFSLKLHMRCHQHFLRTEAKVKEEXPDPEXKGPPHLSDSACLGQQREGGGTELVGTMMKSSTPERTSQGGAGVSPLLVKEEPKEDNGLPTSFPLNATDRPANHTKLREPSEFAANSASALFSQDISVKMASDFLMKLSAANQKEPMNLNFKIKEEPKEEETLSVTLPRSSYVFSPESEVSAASISEDTLKPQEAKGNVLRRDMSVKAASELLMKLSAESYKDTQMVKIKEEPMEVDIQDSQVSISPSCNVGYSTLIGREKTEPLQKLPEGRVXPERNLFSQDISVKMASELLFQLSEKVSKEHTQKENTIRTTTSPFFSEDTFRQSPFTSNSKDLLPSESVLHGRISAPETEKIVLEAGNGLPSWKFNDQLFPCDVCGKVFGRQQTLSRHLSLHTEERKYKCHLCPYAAKCRANLNQHLTVHSVKLVSTDTEDIVSAVTSEGSDGKKHPYYYSCHVCGFETELNVQFVSHMSLHVDKEQWMFSICCTACDFVTMEEAEIKAHIGTKHTGEDRKTPSESNSPSSSSLSALSDSANSRDDSDSSQKNKSGSNLLVISVMPGSQPSLNSEEKPEKGFECVFCNFVCKTKNMFERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPTGGLNSGQW
SIO_010081: ZNF827
subclass of: SO_0000673
so part of: ZNF827
location: join(13333621..13333663,13369341..13370393,13381365..13381537,13387267..13387747,13406646..13406879,13434792..13435031,13437443..13437497,13455393..13455496,13501734..13501871,13505589..13505760,13506583..13506749,13517980..13518171,13518539..13518716,13520712..13520727)
location: region:13333621-13520727:1
so has part: feature:13333621-13333663:1:exon
so has part: feature:13369341-13370393:1:exon
so has part: feature:13381365-13381537:1:exon
so has part: feature:13387267-13387747:1:exon
so has part: feature:13406646-13406879:1:exon
so has part: feature:13434792-13435031:1:exon
so has part: feature:13437443-13437497:1:exon
so has part: feature:13455393-13455496:1:exon
so has part: feature:13501734-13501871:1:exon
so has part: feature:13505589-13505760:1:exon
so has part: feature:13506583-13506749:1:exon
so has part: feature:13517980-13518171:1:exon
so has part: feature:13518539-13518716:1:exon
so has part: feature:13520712-13520727:1:exon

XP_019833371.1
type: Protein
SIO_000068: ncbiprotein

position:13520727:1
position: 13520727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13333621-13333663:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13369341-13370393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13381365-13381537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13387267-13387747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13406646-13406879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13434792-13435031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13437443-13437497:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13455393-13455496:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13501734-13501871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13505589-13505760:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13506583-13506749:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13517980-13518171:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13518539-13518716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:13520712-13520727:1:exon

ZNF827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: ZNF827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 827 isoform X3
translation: MPRRKQEQPKRLPSHVSRQDEAEGELSEGEHWYGNSSETPSEASYGEVQENYKLCLEDRIQEQSTSPDTSLGSATPSSHTLELVALDGEVLRDPLQCPDHLSPGVSSLCEEDHPGSTKPLSSNLRRLLEAGSLKLDAAATANGRVESPVNAGSNLSFSPPSHHAQQLSVLARKLAEKQEQNDQYPPSNRFLWNQGKWLPNSTTTCDLSPDSAILKLKAAANAVLQDKSLTRTEETVRFESFSSPFSSQSASSTLAALSKKVSERSLTPGQEHPPPASSFLSLASMTSSAALLKEVAARAAGTLLAEKSSLVPEDPLPPPPSEKKQEKVTPPPPPPPPPPPPPPPQSLELLLLPVPKGRVSKPSNSASEEESGKPFQCPICGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCQLCPFTSSRHFSLKLHMRCHQHFLRTEAKVKEEXPDPEXKGPPHLSDSACLGQQREGGGTELVGTMMKSSTPERTSQGGAGVSPLLVKEEPKEDNGLPTSFPLNATDRPANHTKLREPSEFAANSASALFSQDISVKMASDFLMKLSAANQKEPMNLNFKIKEEPKEEETLSVTLPRSSYVFSPESEVSAASISEDTLKPQEAKGNVLRRDMSVKAASELLMKLSAESYKDTQMVKIKEEPMEVDIQDSQVSISPSCNVGYSTLIGREKTEPLQKLPEGRVXPERNLFSQDISVKMASELLFQLSEKVSKEHTQKENTIRTTTSPFFSEDTFRQSPFTSNSKDLLPSESVLHGRISAPETEKIVLEAGNGLPSWKFNDQLFPCDVCGKVFGRQQTLSRHLSLHTEERKYKCHLCPYAAKCRANLNQHLTVHSVKLVSTDTEDIVSAVTSEGSDGKKHPYYYSCHVCGFETELNVQFVSHMSLHVDKEQWMFSICCTACDFVTMEEAEIKAHIGTKHTGEDRKTPSESNSPSSSSLSALSDSANSRDDSDSSQKNKSGSNLLVISVMPGSQPSLNSEEKPEKGFECVFCNFVCKTKNMFERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPTGGLK
SIO_010081: ZNF827
subclass of: SO_0000673
so part of: ZNF827
location: join(13333621..13333663,13369341..13370393,13381365..13381537,13387267..13387747,13406646..13406879,13434792..13435031,13437443..13437497,13455393..13455496,13501734..13501871,13505589..13505760,13506583..13506749,13517980..13518171,13518539..13518720)
location: region:13333621-13518720:1
so has part: feature:13333621-13333663:1:exon
so has part: feature:13369341-13370393:1:exon
so has part: feature:13381365-13381537:1:exon
so has part: feature:13387267-13387747:1:exon
so has part: feature:13406646-13406879:1:exon
so has part: feature:13434792-13435031:1:exon
so has part: feature:13437443-13437497:1:exon
so has part: feature:13455393-13455496:1:exon
so has part: feature:13501734-13501871:1:exon
so has part: feature:13505589-13505760:1:exon
so has part: feature:13506583-13506749:1:exon
so has part: feature:13517980-13518171:1:exon
so has part: feature:13518539-13518720:1:exon

XP_019833372.1
type: Protein
SIO_000068: ncbiprotein

position:13518720:1
position: 13518720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13333621-13333663:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13369341-13370393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13381365-13381537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13387267-13387747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13406646-13406879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13434792-13435031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13437443-13437497:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13455393-13455496:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13501734-13501871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13505589-13505760:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13506583-13506749:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13517980-13518171:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:13518539-13518720:1:exon

C17H4orf51
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: C17H4orf51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13528342..13580483)
location: region:13528342-13580483:-1
so has part: feature:13528342-13580483:-1:exon
subclass of: SO_0000010

109571550
type: Gene
SIO_000068: ncbigene

position:13528342:-1
position: 13528342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13580483:-1
position: 13580483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13528342-13580483:-1:exon

C17H4orf51
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: C17H4orf51
product: chromosome 17 C4orf51 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019978092.1
SIO_010081: C17H4orf51
subclass of: SO_0000673
so part of: C17H4orf51
location: complement(join(13528342..13528641,13548864..13548937,13550244..13550307,13552714..13552772,13573696..13573757,13579933..13580274))
location: region:13528342-13580274:-1
so has part: feature:13579933-13580274:-1:exon
so has part: feature:13573696-13573757:-1:exon
so has part: feature:13552714-13552772:-1:exon
so has part: feature:13550244-13550307:-1:exon
so has part: feature:13548864-13548937:-1:exon
so has part: feature:13528342-13528641:-1:exon

position:13580274:-1
position: 13580274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13579933-13580274:-1:exon

position:13579933:-1
position: 13579933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13573696-13573757:-1:exon

position:13573696:-1
position: 13573696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13573757:-1
position: 13573757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13552714-13552772:-1:exon

position:13552714:-1
position: 13552714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13552772:-1
position: 13552772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13550244-13550307:-1:exon

position:13550244:-1
position: 13550244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13550307:-1
position: 13550307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13548864-13548937:-1:exon

position:13548864:-1
position: 13548864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13548937:-1
position: 13548937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13528342-13528641:-1:exon

position:13528641:-1
position: 13528641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C17H4orf51
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: C17H4orf51
product: chromosome 17 C4orf51 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_019978091.1
SIO_010081: C17H4orf51
subclass of: SO_0000673
so part of: C17H4orf51
location: complement(join(13528428..13528641,13546437..13546604,13548864..13548937,13550244..13550307,13552714..13552772,13573696..13573757,13579933..13580483))
location: region:13528428-13580483:-1
so has part: feature:13579933-13580483:-1:exon
so has part: feature:13573696-13573757:-1:exon
so has part: feature:13552714-13552772:-1:exon
so has part: feature:13550244-13550307:-1:exon
so has part: feature:13548864-13548937:-1:exon
so has part: feature:13546437-13546604:-1:exon
so has part: feature:13528428-13528641:-1:exon

position:13528428:-1
position: 13528428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13579933-13580483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13573696-13573757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13552714-13552772:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13550244-13550307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13548864-13548937:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13546437-13546604:-1:exon

position:13546437:-1
position: 13546437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13546604:-1
position: 13546604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13528428-13528641:-1:exon

C17H4orf51
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: C17H4orf51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C4orf51 homolog isoform X2
translation: MSHFFYLTPQXVLPFSPLTSQEFDVIRRKAAASWQDEARWSDLSVTTYMGSYREKQLDESTGGRLRAGQPWPEPHKMALPNCFAGRAELQETTDAKGLLPHISSSFKNSSIVKHGVAHQILSGDFPPARPPPGYERPYARIKKPAPKSLMKYSLLRRELLKHIQLARIMNGRTANS
SIO_010081: C17H4orf51
subclass of: SO_0000673
so part of: C17H4orf51
location: complement(join(13528597..13528641,13548864..13548937,13550244..13550307,13552714..13552772,13573696..13573757,13579933..13580159))
location: region:13528597-13580159:-1
so has part: feature:13579933-13580159:-1:exon
so has part: feature:13573696-13573757:-1:exon
so has part: feature:13552714-13552772:-1:exon
so has part: feature:13550244-13550307:-1:exon
so has part: feature:13548864-13548937:-1:exon
so has part: feature:13528597-13528641:-1:exon

XP_019833651.1
type: Protein
SIO_000068: ncbiprotein

position:13528597:-1
position: 13528597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13580159:-1
position: 13580159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13579933-13580159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13573696-13573757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13552714-13552772:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13550244-13550307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13548864-13548937:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13528597-13528641:-1:exon

C17H4orf51
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: C17H4orf51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C4orf51 homolog isoform X1
translation: MSHFFYLTPQXVLPFSPLTSQEFDVIRRKAAASWQDEARWSDLSVTTYMGSYREKQLDESTGGRLRAGQPWPEPHKMALPNCFAGRAELQETTDAKGLLPHISSSFKNSSIVKHGVAHQILSGDFPPARPPPGYERPYARIKKPAPKSLMKYSLLRRELLKHFREPSDSISKTSSSGGSEADQVVYTRKGPFSSFV
SIO_010081: C17H4orf51
subclass of: SO_0000673
so part of: C17H4orf51
location: complement(join(13546500..13546604,13548864..13548937,13550244..13550307,13552714..13552772,13573696..13573757,13579933..13580159))
location: region:13546500-13580159:-1
so has part: feature:13579933-13580159:-1:exon
so has part: feature:13573696-13573757:-1:exon
so has part: feature:13552714-13552772:-1:exon
so has part: feature:13550244-13550307:-1:exon
so has part: feature:13548864-13548937:-1:exon
so has part: feature:13546500-13546604:-1:exon

XP_019833650.1
type: Protein
SIO_000068: ncbiprotein

position:13546500:-1
position: 13546500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13579933-13580159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13573696-13573757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13552714-13552772:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13550244-13550307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13548864-13548937:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13546500-13546604:-1:exon

MMAA
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: MMAA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13599886..13628747)
location: region:13599886-13628747:-1
so has part: feature:13599886-13628747:-1:exon
subclass of: SO_0000010

109571451
type: Gene
SIO_000068: ncbigene

position:13599886:-1
position: 13599886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13628747:-1
position: 13628747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13599886-13628747:-1:exon

MMAA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MMAA
product: methylmalonic aciduria (cobalamin deficiency) cblA type, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 22 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_019977940.1
SIO_010081: MMAA
subclass of: SO_0000673
so part of: MMAA
location: complement(join(13599886..13600239,13601262..13601411,13603359..13603444,13605898..13606068,13609132..13609254,13612287..13612790,13628715..13628747))
location: region:13599886-13628747:-1
so has part: feature:13628715-13628747:-1:exon
so has part: feature:13612287-13612790:-1:exon
so has part: feature:13609132-13609254:-1:exon
so has part: feature:13605898-13606068:-1:exon
so has part: feature:13603359-13603444:-1:exon
so has part: feature:13601262-13601411:-1:exon
so has part: feature:13599886-13600239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13628715-13628747:-1:exon

position:13628715:-1
position: 13628715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13612287-13612790:-1:exon

position:13612287:-1
position: 13612287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13612790:-1
position: 13612790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13609132-13609254:-1:exon

position:13609132:-1
position: 13609132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13609254:-1
position: 13609254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13605898-13606068:-1:exon

position:13605898:-1
position: 13605898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13606068:-1
position: 13606068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13603359-13603444:-1:exon

position:13603359:-1
position: 13603359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13603444:-1
position: 13603444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13601262-13601411:-1:exon

position:13601262:-1
position: 13601262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13601411:-1
position: 13601411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13599886-13600239:-1:exon

position:13600239:-1
position: 13600239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MMAA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MMAA
product: methylmalonic aciduria (cobalamin deficiency) cblA type, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_019977941.1
SIO_010081: MMAA
subclass of: SO_0000673
so part of: MMAA
location: complement(join(13599886..13600239,13603359..13603444,13605898..13606068,13609132..13609254,13612287..13612790,13628520..13628686))
location: region:13599886-13628686:-1
so has part: feature:13628520-13628686:-1:exon
so has part: feature:13612287-13612790:-1:exon
so has part: feature:13609132-13609254:-1:exon
so has part: feature:13605898-13606068:-1:exon
so has part: feature:13603359-13603444:-1:exon
so has part: feature:13599886-13600239:-1:exon

position:13628686:-1
position: 13628686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13628520-13628686:-1:exon

position:13628520:-1
position: 13628520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13612287-13612790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13609132-13609254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13605898-13606068:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13603359-13603444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13599886-13600239:-1:exon

MMAA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: MMAA
product: methylmalonic aciduria (cobalamin deficiency) cblA type, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 22 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_019977939.1
SIO_010081: MMAA
subclass of: SO_0000673
so part of: MMAA
location: complement(join(13599886..13600239,13601262..13601411,13603359..13603444,13605898..13606068,13609132..13609254,13612287..13612790,13628520..13628684))
location: region:13599886-13628684:-1
so has part: feature:13628520-13628684:-1:exon
so has part: feature:13612287-13612790:-1:exon
so has part: feature:13609132-13609254:-1:exon
so has part: feature:13605898-13606068:-1:exon
so has part: feature:13603359-13603444:-1:exon
so has part: feature:13601262-13601411:-1:exon
so has part: feature:13599886-13600239:-1:exon

position:13628684:-1
position: 13628684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13628520-13628684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13612287-13612790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13609132-13609254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13605898-13606068:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13603359-13603444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13601262-13601411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13599886-13600239:-1:exon

MMAA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MMAA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X2
translation: MNIPMLLQRPHQHFLKGLVRTPFRCYRFIFHPSPHLGSGVPCAQLLSSPGLHCAKWMLPSNGLTRKLCLQTTLEEHTEGLSDKEQRLVDKLYAGLIQGQRACLAEAITLVESTHSRKKELAQVLLQKVLAHHREQENLNKGKPLAFRVGLSGPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCTSGGSLLGDKTRMTELSRDMNAYIRPSPTRGTLGGVTRTTNEAILLCEGGGYDVILVETVGVGQSEFAVADMVDMFILLLPPAGGDELQVIRISAXSGEGITEMWDKMKEFQEVMLVSGELAAKRQKQQKVWMWNLIQENVIEHFRTHPAVREQIPLLEKRVLSGALSPGLAADLLLKAFKSRHE
SIO_010081: MMAA
subclass of: SO_0000673
so part of: MMAA
location: complement(join(13599949..13600239,13603359..13603444,13605898..13606068,13609132..13609254,13612287..13612731))
location: region:13599949-13612731:-1
so has part: feature:13612287-13612731:-1:exon
so has part: feature:13609132-13609254:-1:exon
so has part: feature:13605898-13606068:-1:exon
so has part: feature:13603359-13603444:-1:exon
so has part: feature:13599949-13600239:-1:exon

XP_019833500.1
type: Protein
SIO_000068: ncbiprotein

position:13599949:-1
position: 13599949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13612731:-1
position: 13612731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13612287-13612731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13609132-13609254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13605898-13606068:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13603359-13603444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13599949-13600239:-1:exon

MMAA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MMAA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MNIPMLLQRPHQHFLKGLVRTPFRCYRFIFHPSPHLGSGVPCAQLLSSPGLHCAKWMLPSNGLTRKLCLQTTLEEHTEGLSDKEQRLVDKLYAGLIQGQRACLAEAITLVESTHSRKKELAQVLLQKVLAHHREQENLNKGKPLAFRVGLSGPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCTSGGSLLGDKTRMTELSRDMNAYIRPSPTRGTLGGVTRTTNEAILLCEGGGYDVILVETVGVGQSEFAVADMVDMFILLLPPAGGDELQGIKRGIVEMADLVAITKSDGDLIVPARRIQAEYVSALKLLRRRSGVWRPKVIRISAXSGEGITEMWDKMKEFQEVMLVSGELAAKRQKQQKVWMWNLIQENVIEHFRTHPAVREQIPLLEKRVLSGALSPGLAADLLLKAFKSRHE
SIO_010081: MMAA
subclass of: SO_0000673
so part of: MMAA
location: complement(join(13599949..13600239,13601262..13601411,13603359..13603444,13605898..13606068,13609132..13609254,13612287..13612731))
location: region:13599949-13612731:-1
so has part: feature:13612287-13612731:-1:exon
so has part: feature:13609132-13609254:-1:exon
so has part: feature:13605898-13606068:-1:exon
so has part: feature:13603359-13603444:-1:exon
so has part: feature:13601262-13601411:-1:exon
so has part: feature:13599949-13600239:-1:exon

XP_019833498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13612287-13612731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13609132-13609254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13605898-13606068:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13603359-13603444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13601262-13601411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13599949-13600239:-1:exon

MMAA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: MMAA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MNIPMLLQRPHQHFLKGLVRTPFRCYRFIFHPSPHLGSGVPCAQLLSSPGLHCAKWMLPSNGLTRKLCLQTTLEEHTEGLSDKEQRLVDKLYAGLIQGQRACLAEAITLVESTHSRKKELAQVLLQKVLAHHREQENLNKGKPLAFRVGLSGPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCTSGGSLLGDKTRMTELSRDMNAYIRPSPTRGTLGGVTRTTNEAILLCEGGGYDVILVETVGVGQSEFAVADMVDMFILLLPPAGGDELQGIKRGIVEMADLVAITKSDGDLIVPARRIQAEYVSALKLLRRRSGVWRPKVIRISAXSGEGITEMWDKMKEFQEVMLVSGELAAKRQKQQKVWMWNLIQENVIEHFRTHPAVREQIPLLEKRVLSGALSPGLAADLLLKAFKSRHE
SIO_010081: MMAA
subclass of: SO_0000673
so part of: MMAA
location: complement(join(13599949..13600239,13601262..13601411,13603359..13603444,13605898..13606068,13609132..13609254,13612287..13612731))
location: region:13599949-13612731:-1
so has part: feature:13612287-13612731:-1:exon
so has part: feature:13609132-13609254:-1:exon
so has part: feature:13605898-13606068:-1:exon
so has part: feature:13603359-13603444:-1:exon
so has part: feature:13601262-13601411:-1:exon
so has part: feature:13599949-13600239:-1:exon

XP_019833499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13612287-13612731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13609132-13609254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13605898-13606068:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13603359-13603444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13601262-13601411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13599949-13600239:-1:exon

SMAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: SMAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13687626..13768652)
location: region:13687626-13768652:-1
so has part: feature:13687626-13768652:-1:exon
subclass of: SO_0000010

109571265
type: Gene
SIO_000068: ncbigene

position:13687626:-1
position: 13687626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13768652:-1
position: 13768652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13687626-13768652:-1:exon

SMAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SMAD1
product: SMAD family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 22 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_019977605.1
SIO_010081: SMAD1
subclass of: SO_0000673
so part of: SMAD1
location: complement(join(13687626..13688996,13693289..13693545,13699226..13699447,13704624..13704740,13707479..13707736,13734110..13734686,13768559..13768652))
location: region:13687626-13768652:-1
so has part: feature:13768559-13768652:-1:exon
so has part: feature:13734110-13734686:-1:exon
so has part: feature:13707479-13707736:-1:exon
so has part: feature:13704624-13704740:-1:exon
so has part: feature:13699226-13699447:-1:exon
so has part: feature:13693289-13693545:-1:exon
so has part: feature:13687626-13688996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13768559-13768652:-1:exon

position:13768559:-1
position: 13768559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13734110-13734686:-1:exon

position:13734110:-1
position: 13734110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13734686:-1
position: 13734686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13707479-13707736:-1:exon

position:13707479:-1
position: 13707479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13707736:-1
position: 13707736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13704624-13704740:-1:exon

position:13704624:-1
position: 13704624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13704740:-1
position: 13704740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13699226-13699447:-1:exon

position:13699226:-1
position: 13699226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13699447:-1
position: 13699447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13693289-13693545:-1:exon

position:13693289:-1
position: 13693289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13693545:-1
position: 13693545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13687626-13688996:-1:exon

position:13688996:-1
position: 13688996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SMAD1
product: SMAD family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 22 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 170 samples with support for all annotated introns
transcript id: XM_019977603.1
SIO_010081: SMAD1
subclass of: SO_0000673
so part of: SMAD1
location: complement(join(13687626..13688996,13693289..13693545,13699226..13699447,13704624..13704740,13707479..13707736,13734110..13734686,13738977..13739209))
location: region:13687626-13739209:-1
so has part: feature:13738977-13739209:-1:exon
so has part: feature:13734110-13734686:-1:exon
so has part: feature:13707479-13707736:-1:exon
so has part: feature:13704624-13704740:-1:exon
so has part: feature:13699226-13699447:-1:exon
so has part: feature:13693289-13693545:-1:exon
so has part: feature:13687626-13688996:-1:exon

position:13739209:-1
position: 13739209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13738977-13739209:-1:exon

position:13738977:-1
position: 13738977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13734110-13734686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13707479-13707736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13704624-13704740:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13699226-13699447:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13693289-13693545:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13687626-13688996:-1:exon

SMAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9915
gene: SMAD1
product: SMAD family member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 22 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_019977606.1
SIO_010081: SMAD1
subclass of: SO_0000673
so part of: SMAD1
location: complement(join(13687626..13688996,13693289..13693545,13699226..13699447,13704624..13704740,13707479..13707736,13734110..13734686,13738654..13738673))
location: region:13687626-13738673:-1
so has part: feature:13738654-13738673:-1:exon
so has part: feature:13734110-13734686:-1:exon
so has part: feature:13707479-13707736:-1:exon
so has part: feature:13704624-13704740:-1:exon
so has part: feature:13699226-13699447:-1:exon
so has part: feature:13693289-13693545:-1:exon
so has part: feature:13687626-13688996:-1:exon

position:13738673:-1
position: 13738673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13738654-13738673:-1:exon

position:13738654:-1
position: 13738654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13734110-13734686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13707479-13707736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13704624-13704740:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13699226-13699447:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13693289-13693545:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13687626-13688996:-1:exon

SMAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SMAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 1
translation: MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMTQDGSQPMDTNMMAPSLPSEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
SIO_010081: SMAD1
subclass of: SO_0000673
so part of: SMAD1
location: complement(join(13688853..13688996,13693289..13693545,13699226..13699447,13704624..13704740,13707479..13707736,13734110..13734509))
location: region:13688853-13734509:-1
so has part: feature:13734110-13734509:-1:exon
so has part: feature:13707479-13707736:-1:exon
so has part: feature:13704624-13704740:-1:exon
so has part: feature:13699226-13699447:-1:exon
so has part: feature:13693289-13693545:-1:exon
so has part: feature:13688853-13688996:-1:exon

XP_019833162.1
type: Protein
SIO_000068: ncbiprotein

position:13688853:-1
position: 13688853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13734509:-1
position: 13734509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13734110-13734509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13707479-13707736:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13704624-13704740:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13699226-13699447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13693289-13693545:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13688853-13688996:-1:exon

SMAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SMAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 1
translation: MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMTQDGSQPMDTNMMAPSLPSEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
SIO_010081: SMAD1
subclass of: SO_0000673
so part of: SMAD1
location: complement(join(13688853..13688996,13693289..13693545,13699226..13699447,13704624..13704740,13707479..13707736,13734110..13734509))
location: region:13688853-13734509:-1
so has part: feature:13734110-13734509:-1:exon
so has part: feature:13707479-13707736:-1:exon
so has part: feature:13704624-13704740:-1:exon
so has part: feature:13699226-13699447:-1:exon
so has part: feature:13693289-13693545:-1:exon
so has part: feature:13688853-13688996:-1:exon

XP_019833164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13734110-13734509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13707479-13707736:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13704624-13704740:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13699226-13699447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13693289-13693545:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13688853-13688996:-1:exon

SMAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9915
gene: SMAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 1
translation: MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMTQDGSQPMDTNMMAPSLPSEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
SIO_010081: SMAD1
subclass of: SO_0000673
so part of: SMAD1
location: complement(join(13688853..13688996,13693289..13693545,13699226..13699447,13704624..13704740,13707479..13707736,13734110..13734509))
location: region:13688853-13734509:-1
so has part: feature:13734110-13734509:-1:exon
so has part: feature:13707479-13707736:-1:exon
so has part: feature:13704624-13704740:-1:exon
so has part: feature:13699226-13699447:-1:exon
so has part: feature:13693289-13693545:-1:exon
so has part: feature:13688853-13688996:-1:exon

XP_019833165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13734110-13734509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13707479-13707736:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13704624-13704740:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13699226-13699447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13693289-13693545:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13688853-13688996:-1:exon

LOC109570861
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109570861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(13973368..13973656)
location: region:13973368-13973656:-1
so has part: feature:13973368-13973656:-1:exon

109570861
type: Gene
SIO_000068: ncbigene

position:13973368:-1
position: 13973368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13973656:-1
position: 13973656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13973368-13973656:-1:exon

LOC109570861
type: Exon
subclass of: SO_0000147
RO_0002162: 9915
gene: LOC109570861
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins
pseudo: true
SIO_010081: LOC109570861
subclass of: SO_0000673
so part of: LOC109570861
location: complement(13973368..13973656)
location: region:13973368-13973656:-1
so has part: feature:13973368-13973656:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13973368-13973656:-1:exon

LOC109571046
type: Gene
subclass of: SO_0000704
RO_0002162: 9915
gene: LOC109571046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(14057836..14064091)
location: region:14057836-14064091:-1
so has part: feature:14057836-14064091:-1:exon
subclass of: SO_0000011

109571046
type: Gene
SIO_000068: ncbigene

position:14057836:-1
position: 14057836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14064091:-1
position: 14064091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14057836-14064091:-1:exon

LOC109571046
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9915
nc RNA class: lncRNA
gene: LOC109571046
product: uncharacterized LOC109571046
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XR_002182591.1
SIO_010081: LOC109571046
subclass of: SO_0000673
so part of: LOC109571046
location: complement(join(14057836..14058103,14058738..14058883,14059160..14059315,14063165..14064091))
location: region:14057836-14064091:-1
so has part: feature:14063165-14064091:-1:exon
so has part: feature:14059160-14059315:-1:exon
so has part: feature:14058738-14058883:-1:exon
so has part: feature:14057836-14058103:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14063165-14064091:-1:exon

position:14063165:-1
position: 14063165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14059160-14059315:-1:exon

position:14059160:-1
position: 14059160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14059315:-1
position: 14059315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14058738-14058883:-1:exon

position:14058738:-1
position: 14058738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition