Methanothrix soehngenii GP6 plasmid pGP6, complete sequence.
type: Entry
definition: Methanothrix soehngenii GP6 plasmid pGP6, complete sequence.
sequence version: NC_015430.1
sequence date: 2023-01-01
sequence: sequence
division: CON
label: NC_015430.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02604263
keyword: RefSeq
source: Methanothrix soehngenii GP6
organism: Methanothrix soehngenii GP6
taxonomy: Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia; Methanotrichales; Methanotrichaceae; Methanothrix.
reference: 1
references: 21571998
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP002566.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 01/01/2023 00:47:41\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,054\nCDSs (total) :: 2,997\nGenes (coding) :: 2,941\nCDSs (with protein) :: 2,941\nGenes (RNA) :: 57\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 2\nPseudo Genes (total) :: 56\nCDSs (without protein) :: 56\nPseudo Genes (ambiguous residues) :: 0 of 56\nPseudo Genes (frameshifted) :: 24 of 56\nPseudo Genes (incomplete) :: 38 of 56\nPseudo Genes (internal stop) :: 4 of 56\nPseudo Genes (multiple problems) :: 9 of 56\nCRISPR Arrays :: 5\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 18019
topology: circular
so has quality: SO_0000988
location: 1..18019
location: region:1-18019:1
RO_0002162: 990316

NC_015430
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02604263
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Methanosaeta concilii, a specialist in aceticlastic methanogenesis
author: Barber, R.D.
author: Zhang, L.
author: Harnack, M.
author: Olson, M.V.
author: Kaul, R.
author: Ingram-Smith, C.
author: Smith, K.S.
journal: J Bacteriol
volume: 193
issue: 14
pages: 3668-3669
year: 2011
pubmed: 21571998

21571998
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Barber, R.D.
author: Zhang, L.
author: Harnack, M.
author: Ingram-Smith, C.
author: Kaul, R.
author: Olson, M.V.
author: Smith, K.S.
journal: Submitted (02-MAR-2011) Biological Science, University of Wisconsin - Parkside, 900 Wood Road, Kenosha, WI 53144, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18019:1
position: 18019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-18019:1:source
so part of: sequence
organism: Methanothrix soehngenii GP6
mol type: genomic DNA
strain: GP6
culture collection: ATCC:BAA-1996
type material: type strain of Methanosaeta concilii
plasmid: pGP6

990316
type: Taxonomy
SIO_000068: taxonomy

MCON_RS14880
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14880
old locus tag: MCON_3549
so part of: sequence
location: 552..1205
location: region:552-1205:1
so has part: feature:552-1205:1:exon
subclass of: SO_0000010

10447612
type: Gene
SIO_000068: ncbigene

position:552:1
position: 552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1205:1
position: 1205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552-1205:1:exon

MCON_RS14880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14880
old locus tag: MCON_3549
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATVVITGNKGDITANTDMKRRVCPITLDARVEEPWLRAGNFRHDAAKGDAIDKWVLDHQTELIRDILSMASGWNEAGNPEMYRGPNLGKFEEWSYVIGNILGFVGIKNFLGNLSAFYQDADPDRYALTEMFILLAEEIGEGKSKTMVAREIYDLLKGARDNTALPINVLKALDSDNANALGKVLQGLAYGEIANGMKLIREKDQSKNAFAYRIVKA
SIO_010081: MCON_RS14880
subclass of: SO_0000673
so part of: MCON_RS14880
location: 552..1205
location: region:552-1205:1
so has part: feature:552-1205:1:exon

WP_013729140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552-1205:1:exon

MCON_RS14885
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14885
old locus tag: MCON_3550
so part of: sequence
location: complement(1535..1984)
location: region:1535-1984:-1
so has part: feature:1535-1984:-1:exon
subclass of: SO_0000010

10447613
type: Gene
SIO_000068: ncbigene

position:1535:-1
position: 1535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1984:-1
position: 1984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1535-1984:-1:exon

MCON_RS14885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14885
old locus tag: MCON_3550
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAPEQENQQQEPPITKEPIAAVPKRAKQIAAELFANEQLLRKEMIKIGENLKEELLEEEAALQELERSQPPMVPCTESRPYRERRHLEKDVRVSAVFNRRGPVQLDEDRDFYGIPRMKHSSPVTTTRPYQQRRYGQNVLSTRDLSVHQK
SIO_010081: MCON_RS14885
subclass of: SO_0000673
so part of: MCON_RS14885
location: complement(1535..1984)
location: region:1535-1984:-1
so has part: feature:1535-1984:-1:exon

WP_157864014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1535-1984:-1:exon

MCON_RS14890
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14890
old locus tag: MCON_3553
so part of: sequence
location: complement(3689..5671)
location: region:3689-5671:-1
so has part: feature:3689-5671:-1:exon
subclass of: SO_0000010

10447616
type: Gene
SIO_000068: ncbigene

position:3689:-1
position: 3689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5671:-1
position: 5671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3689-5671:-1:exon

MCON_RS14890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14890
old locus tag: MCON_3553
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTYVQSFLKKESLRHTPLKPDLQGYLDVSKNDLTPAAMHYNAHNYRQIDEKWYDDFLERAAGLPDNEEIKQESLRLWDLGVKWGYFPIESAEDIANGKAVALAMAKARHLLRVERPILEFALMQEELEESSDAIDLENSILKNLYLTCSDESVEINYHPFPLLKPDHVLAEEIFEQLGAAQLKIGGESLHGRIYTRGSDLVLIANDSISPLTVDALAAEIAKLKITDHGSVLEKPLPRRIVGDILRKQSFPGFRNLRSVVRHPFFDSKGRIYRSIGYNKEYQVYISNSRTFKLKDPEEAASHLMDEVLFMGDDQVLGWPFVSEADQANALAMAMTPFLRPTIETAPAFLLMRQSAAGTGTTLLATSLMKIAFGQDVERFIGTMPDDEGELEKTLFSYARDGSPLIFFDNVRRKLNSKALESFMTSKDKTQRAFFTQSISGYPNVATVVITGNKGDITANTDMKRRVCPITLDARVEEPWLRAGNFRHDAAKGDAIDKWVLDHQTELIRDILSMASGWNEAGNPEMYRGPNLGKFEEWSYVIGNILGFVGIKNFLGNLSAFYQDADPDRYALTEMFILLAEEIGEGKSKTMVAREIYDLLKGARDNTALPINVLKALDSDNANALGKVLQGLAYGEIANGMKLIREKDQSKNAFAYRIVKA
SIO_010081: MCON_RS14890
subclass of: SO_0000673
so part of: MCON_RS14890
location: complement(3689..5671)
location: region:3689-5671:-1
so has part: feature:3689-5671:-1:exon

WP_048133430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3689-5671:-1:exon

MCON_RS14895
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14895
old locus tag: MCON_3554
so part of: sequence
location: complement(5924..6574)
location: region:5924-6574:-1
so has part: feature:5924-6574:-1:exon
subclass of: SO_0000010

10447617
type: Gene
SIO_000068: ncbigene

position:5924:-1
position: 5924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6574:-1
position: 6574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5924-6574:-1:exon

MCON_RS14895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14895
old locus tag: MCON_3554
inference: COORDINATES: protein motif:HMM:NF022958.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DCL family protein
translation: MPAAKQPKMGQNMPKRKVFLSGHEFPSLTAARAHAKAILDKYSSGDFVNDGEIAFLKSAIALRGPEKLKEKEGVGIKSIFIDYNCGGDKAFYIRRIDGTETDFSYIKCFTKSNLFNDFSAACRNAIKDDKSVLKIGLGFDQYDAHHEGMPFKDIVQSFIEAEHIDITKIEFLKGDGVQGRYFKDEKLATAFKKFHSEHAVMEILEKEDHKEKHRHK
SIO_010081: MCON_RS14895
subclass of: SO_0000673
so part of: MCON_RS14895
location: complement(5924..6574)
location: region:5924-6574:-1
so has part: feature:5924-6574:-1:exon

WP_013729145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5924-6574:-1:exon

MCON_RS16375
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS16375
so part of: sequence
location: complement(6531..6776)
location: region:6531-6776:-1
so has part: feature:6531-6776:-1:exon
subclass of: SO_0000010

43447424
type: Gene
SIO_000068: ncbigene

position:6531:-1
position: 6531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6776:-1
position: 6776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6531-6776:-1:exon

MCON_RS16375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS16375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEKKKRHRPPGVHFYPTVHELEALGSYGREQGLSISYLAAQMFHHGFNLWKNGEFTPQPSERARAMFASSKTAKDGAKYA
SIO_010081: MCON_RS16375
subclass of: SO_0000673
so part of: MCON_RS16375
location: complement(6531..6776)
location: region:6531-6776:-1
so has part: feature:6531-6776:-1:exon

WP_048133436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6531-6776:-1:exon

MCON_RS15825
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS15825
old locus tag: MCON_3555
so part of: sequence
location: complement(7192..7470)
location: region:7192-7470:-1
so has part: feature:7192-7470:-1:exon
subclass of: SO_0000010

32173549
type: Gene
SIO_000068: ncbigene

position:7192:-1
position: 7192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7470:-1
position: 7470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7192-7470:-1:exon

MCON_RS15825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS15825
old locus tag: MCON_3555
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVEMSILNHNDLENILLDVKELKLAGLTAKKIASELDRLGYKKPSPTVSWQTHHVLKLIAELRRRGELPAIGHFKEQFRPSAQKISCHFPEY
SIO_010081: MCON_RS15825
subclass of: SO_0000673
so part of: MCON_RS15825
location: complement(7192..7470)
location: region:7192-7470:-1
so has part: feature:7192-7470:-1:exon

WP_013729146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7192-7470:-1:exon

MCON_RS14910
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14910
old locus tag: MCON_3556
so part of: sequence
location: complement(7642..9879)
location: region:7642-9879:-1
so has part: feature:7642-9879:-1:exon
subclass of: SO_0000010

10447619
type: Gene
SIO_000068: ncbigene

position:7642:-1
position: 7642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9879:-1
position: 9879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7642-9879:-1:exon

MCON_RS14910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14910
old locus tag: MCON_3556
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRHYLKIGGEDVSGYMQSVRISRDGDGADADFVLANIYGMFTGKWRDEGNINARVTLLLENERHTCLGDGDYRQEGELDIEIESNSKIYHAFCGYVTKVDYDEHFVKIRASTPDEFLEEEAMPDGVKPRGGTAYIATPPAEIILDVIAQHKDPPIGITILSEGAAANKGYPVLQVPRKKLPGYKPPIPPGGSEAKFPSHYEYLSPSEYERKYPNNSGRPDGWRPGTGVYGDGWYRPPEGMPRPEYPQRCKHVCRYKEQYKCCKSTECAYKQEGTLCRQVSCPYDIEKRNLCYTICPYDSGDCIDSSLTDLSECSTCGGSGSAANGAICSECGGTGLSNNKAINSALDNAQRVFDDASNRLTAAQEAYDRAETSLQKRNASIAIQKAMQDVIKARNDLNRLEKFKEQPVDEGDAEISGNPEELVYVDFWNPPIIKDQVQGVKGVKYADVIRAVQRSTGGQFFVNEECKAQFIPPNYVIPSTESAIDITHLVTRQGLAKSAMGHANIVVVYGSGITEPGASPVERERHKVVGYLHENVDSIQRHGTIHAAEVDVHYLPKQSQVEELAKNLIDFYKGDDDKAEVDAIGICPRIFQKVQWKVPIGPVMDTDECQFGSTAIMAVVSGRISKVVLDYSCQGWQVNLDVSTEGEDSGTGSMMKPYVTAGDYAFATPELYDQLVKQVSGFKPLLGDVIYVRPTADGKSLEMPVLGNYGKLGDKPPGSYALRKTIDPTILQRTLREMIDKSQS
SIO_010081: MCON_RS14910
subclass of: SO_0000673
so part of: MCON_RS14910
location: complement(7642..9879)
location: region:7642-9879:-1
so has part: feature:7642-9879:-1:exon

WP_013729147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7642-9879:-1:exon

MCON_RS14915
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14915
old locus tag: MCON_3557
so part of: sequence
location: 10089..10586
location: region:10089-10586:1
so has part: feature:10089-10586:1:exon
subclass of: SO_0000010

10447620
type: Gene
SIO_000068: ncbigene

position:10089:1
position: 10089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10586:1
position: 10586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10089-10586:1:exon

MCON_RS14915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14915
old locus tag: MCON_3557
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVYAEIDDLTLSEIDQAVIKRGITKKQLLAEAIDLYLHHDRSELDQAIKERDQARSEADQRWKEANQIKTEFNQLKRDLEALRSQDDQLRSELEITRSEKDQASAEIIGLNRDLEHYKDTLRLKDDEVGFLRAHLSQLSERITPALPPSQEEVKEKRWWRFWKR
SIO_010081: MCON_RS14915
subclass of: SO_0000673
so part of: MCON_RS14915
location: 10089..10586
location: region:10089-10586:1
so has part: feature:10089-10586:1:exon

WP_013729148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10089-10586:1:exon

MCON_RS14920
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14920
old locus tag: MCON_3558
so part of: sequence
location: complement(10812..11180)
location: region:10812-11180:-1
so has part: feature:10812-11180:-1:exon
subclass of: SO_0000010

10447621
type: Gene
SIO_000068: ncbigene

position:10812:-1
position: 10812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11180:-1
position: 11180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10812-11180:-1:exon

MCON_RS14920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14920
old locus tag: MCON_3558
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQEIARDRKEIAALRDQLSSLEKDRDVLSDNQLIQLRLIQDLKEKAKREPGKTELSRAEKIEKYLASRPDHKATFETLKGHLGVDNDLLGIAIKSLLPSGKYAIIKTPGDKRKRALVMLPR
SIO_010081: MCON_RS14920
subclass of: SO_0000673
so part of: MCON_RS14920
location: complement(10812..11180)
location: region:10812-11180:-1
so has part: feature:10812-11180:-1:exon

WP_157864015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10812-11180:-1:exon

MCON_RS14925
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14925
old locus tag: MCON_3559
so part of: sequence
location: complement(11503..11814)
location: region:11503-11814:-1
so has part: feature:11503-11814:-1:exon
subclass of: SO_0000010

10447622
type: Gene
SIO_000068: ncbigene

position:11503:-1
position: 11503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11814:-1
position: 11814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11503-11814:-1:exon

MCON_RS14925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14925
old locus tag: MCON_3559
inference: COORDINATES: protein motif:HMM:NF014080.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix transcriptional regulator
translation: MKQKTGSNMQAARDARARERADTDYSLYEVINKTPGSSVYELAKELGWSSGKVYGSVRRLEKDNWVRIEKAERDGRSVLKITSVKWHEFLTSEEIEEFKSMEF
SIO_010081: MCON_RS14925
subclass of: SO_0000673
so part of: MCON_RS14925
location: complement(11503..11814)
location: region:11503-11814:-1
so has part: feature:11503-11814:-1:exon

WP_013729150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11503-11814:-1:exon

MCON_RS16380
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS16380
so part of: sequence
location: 12163..12330
location: region:12163-12330:1
so has part: feature:12163-12330:1:exon
subclass of: SO_0000010

43447425
type: Gene
SIO_000068: ncbigene

position:12163:1
position: 12163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12330:1
position: 12330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12163-12330:1:exon

MCON_RS16380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS16380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKPALQDHKAKKALRDLVALNYVLQHPTGGGMTYALDERGLEVCRKLREELKRL
SIO_010081: MCON_RS16380
subclass of: SO_0000673
so part of: MCON_RS16380
location: 12163..12330
location: region:12163-12330:1
so has part: feature:12163-12330:1:exon

WP_157864016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12163-12330:1:exon

MCON_RS14930
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14930
old locus tag: MCON_3560
so part of: sequence
location: complement(12352..12597)
location: region:12352-12597:-1
so has part: feature:12352-12597:-1:exon
subclass of: SO_0000010

10447623
type: Gene
SIO_000068: ncbigene

position:12352:-1
position: 12352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12597:-1
position: 12597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12352-12597:-1:exon

MCON_RS14930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14930
old locus tag: MCON_3560
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLTREQNKNLLEAAEEFFDYSPCMHCKHYFDDEDEDSERFDEPSACDAFPDGIPEEIFFGRNLHKEPYPGDHGITFEQAD
SIO_010081: MCON_RS14930
subclass of: SO_0000673
so part of: MCON_RS14930
location: complement(12352..12597)
location: region:12352-12597:-1
so has part: feature:12352-12597:-1:exon

WP_013729151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12352-12597:-1:exon

MCON_RS14935
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14935
old locus tag: MCON_3561
so part of: sequence
location: complement(12584..12979)
location: region:12584-12979:-1
so has part: feature:12584-12979:-1:exon
subclass of: SO_0000010

10447624
type: Gene
SIO_000068: ncbigene

position:12584:-1
position: 12584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12979:-1
position: 12979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12584-12979:-1:exon

MCON_RS14935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14935
old locus tag: MCON_3561
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MPEIRRVILDIDTYNALKVEALVRHDNLKNTLSAMILENLSPEAHTILKCIRDKKSLKVQKSNHKCGASTAIEKSKQLSKNPDALNQIKTFWNEGERNRAEIARKINYPKATTSATISRMIKAGELRNEID
SIO_010081: MCON_RS14935
subclass of: SO_0000673
so part of: MCON_RS14935
location: complement(12584..12979)
location: region:12584-12979:-1
so has part: feature:12584-12979:-1:exon

WP_013729152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12584-12979:-1:exon

MCON_RS14940
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14940
old locus tag: MCON_3562
so part of: sequence
location: 13059..13688
location: region:13059-13688:1
so has part: feature:13059-13688:1:exon
subclass of: SO_0000010

10447625
type: Gene
SIO_000068: ncbigene

position:13059:1
position: 13059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13688:1
position: 13688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13059-13688:1:exon

MCON_RS14940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14940
old locus tag: MCON_3562
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVLIEIAQKRGRMNDSILKFPTAVLELEQAMGELQGQIKGLTRIEMGDDGTPVVSGFSDEQAVARLQNELNETRSQRDELLEIIARIENVFAEHEKLPCSMESIDDRIKEIGQIGRDMQTRLNGLVIDLIVHNRAITLPEIWSHPDVRALEDGRAELIRAGAVELQELEKLKVALEPHLRDEGGLCDRAFYPHHYQPVMNPATISEMAL
SIO_010081: MCON_RS14940
subclass of: SO_0000673
so part of: MCON_RS14940
location: 13059..13688
location: region:13059-13688:1
so has part: feature:13059-13688:1:exon

WP_013729153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13059-13688:1:exon

MCON_RS14945
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14945
old locus tag: MCON_3563
so part of: sequence
location: 13685..14092
location: region:13685-14092:1
so has part: feature:13685-14092:1:exon
subclass of: SO_0000010

10447626
type: Gene
SIO_000068: ncbigene

position:13685:1
position: 13685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14092:1
position: 14092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13685-14092:1:exon

MCON_RS14945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14945
old locus tag: MCON_3563
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSDEYAYLEDTLAGRRQRDPAFEAQLSDVADPRAEERQRLIDSKTPTQRELEQRQYSLSVYGKEHMKRFARPIVSDKPLGELQIPSDQIIVSASTPQMRGHNAERPGPWCDKNGTPILQNHGGCPQRQVLQIRA
SIO_010081: MCON_RS14945
subclass of: SO_0000673
so part of: MCON_RS14945
location: 13685..14092
location: region:13685-14092:1
so has part: feature:13685-14092:1:exon

WP_013729154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13685-14092:1:exon

MCON_RS14950
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14950
old locus tag: MCON_3564
so part of: sequence
location: complement(14136..14585)
location: region:14136-14585:-1
so has part: feature:14136-14585:-1:exon
subclass of: SO_0000010

10447627
type: Gene
SIO_000068: ncbigene

position:14136:-1
position: 14136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14585:-1
position: 14585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14136-14585:-1:exon

MCON_RS14950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14950
old locus tag: MCON_3564
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAPEQENQQQEPPITKEPIAAVPKRAKQIAAELFANEQLLRKEMIKIGENLKEELLEEEAALQELERSQPPMVPCTESRPYRERRHLEKDVRVSAVFNRRGPVQLDEDRDFYGIPRMKHSSPVTTTRPYQQRRYGQNVLSTRDLSVHQK
SIO_010081: MCON_RS14950
subclass of: SO_0000673
so part of: MCON_RS14950
location: complement(14136..14585)
location: region:14136-14585:-1
so has part: feature:14136-14585:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14136-14585:-1:exon

MCON_RS16795
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS16795
old locus tag: MCON_3566
so part of: sequence
location: 15984..16634
location: region:15984-16634:1
so has part: feature:15984-16634:1:exon
subclass of: SO_0000010

69180610
type: Gene
SIO_000068: ncbigene

position:15984:1
position: 15984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16634:1
position: 16634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15984-16634:1:exon

MCON_RS16795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS16795
old locus tag: MCON_3566
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMDEVLFMGDDQVLGWPFVSEADQANALAMAMTPFLRPTIETAPAFLLMRQSAAGTGTTLLATSLMKIAFGQDVERFIGTMPHDEGQLEKTLFSYARHGSPLIFFDNVRRNLNSKALESFMTSKDKTQRAFFTQSISGYPNVATVVITGNKGDITANTDMKRRVCPITLDARVEEPWLKAGNFRHDAAKGDAIAQMGPRSSNGAYKRYFIYGFGLE
SIO_010081: MCON_RS16795
subclass of: SO_0000673
so part of: MCON_RS16795
location: 15984..16634
location: region:15984-16634:1
so has part: feature:15984-16634:1:exon

WP_232844399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15984-16634:1:exon

MCON_RS14960
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14960
old locus tag: MCON_3567
so part of: sequence
location: 16615..17061
location: region:16615-17061:1
so has part: feature:16615-17061:1:exon
subclass of: SO_0000010

10447630
type: Gene
SIO_000068: ncbigene

position:16615:1
position: 16615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17061:1
position: 17061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16615-17061:1:exon

MCON_RS14960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14960
old locus tag: MCON_3567
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASGWNEAGNPEMYRGPNLGKFEEWSYVIGNILGFVGIKNFLGNLSAFYQDADPDRYALTEMFILLAEEIGEGKSKTMVAREIYDLLKGARDNTALPINVLKALDSDNANALGKVLQGLAYGEIANGMKLIREKDQSKNAFAYRIVKA
SIO_010081: MCON_RS14960
subclass of: SO_0000673
so part of: MCON_RS14960
location: 16615..17061
location: region:16615-17061:1
so has part: feature:16615-17061:1:exon

WP_013729157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16615-17061:1:exon

MCON_RS14965
type: Gene
subclass of: SO_0000704
RO_0002162: 990316
locus tag: MCON_RS14965
old locus tag: MCON_3568
so part of: sequence
location: 17170..17652
location: region:17170-17652:1
so has part: feature:17170-17652:1:exon
subclass of: SO_0000010

10447631
type: Gene
SIO_000068: ncbigene

position:17170:1
position: 17170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17652:1
position: 17652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17170-17652:1:exon

MCON_RS14965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 990316
locus tag: MCON_RS14965
old locus tag: MCON_3568
inference: COORDINATES: protein motif:HMM:NF020892.2
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I tRNA ligase family protein
translation: MTPEALTIKNHPHFNEISQGMEIDFDFFGDTDDPACHNRTKEMVEALMENGYVYPREIDLAYCPKCERFLPDRYVEGECPYCGKPARGDECDMGCGRHLEPGEIKNAICKVCGGRAEYPQQTHYFFRLSGFRNFLLEHLQALGGTASARNFATEVGPLGT
SIO_010081: MCON_RS14965
subclass of: SO_0000673
so part of: MCON_RS14965
location: 17170..17652
location: region:17170-17652:1
so has part: feature:17170-17652:1:exon

WP_013729158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17170-17652:1:exon