Staphylococcus argenteus plasmid pST75, complete sequence.
Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus.
A very early-branching Staphylococcus aureus lineage lacking the carotenoid pigment staphyloxanthin
Submitted (02-FEB-2011) Pathogen Sequencing Unit, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, United Kingdom
REFSEQ INFORMATION: The reference sequence is identical to\nFR821778.1.\nAccession number for main chromosome in this genome project:\nFR821777.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/24/2022 01:50:57\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,684\nCDSs (total) :: 2,607\nGenes (coding) :: 2,531\nCDSs (with protein) :: 2,531\nGenes (RNA) :: 77\nrRNAs :: 6, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 5, 5 (5S, 16S, 23S)\ntRNAs :: 57\nncRNAs :: 4\nPseudo Genes (total) :: 76\nCDSs (without protein) :: 76\nPseudo Genes (ambiguous residues) :: 0 of 76\nPseudo Genes (frameshifted) :: 33 of 76\nPseudo Genes (incomplete) :: 41 of 76\nPseudo Genes (internal stop) :: 23 of 76\nPseudo Genes (multiple problems) :: 16 of 76\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
subgroup: phylogenetically divergent clonal complex 75
COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1
GO:0004803 - transposase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
IS6-like element ISSau6 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_001838132.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020366422.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_017465246.1
COORDINATES: similar to AA sequence:RefSeq:WP_009384749.1
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001181101.1
COORDINATES: similar to AA sequence:RefSeq:WP_000843735.1
COORDINATES: similar to AA sequence:RefSeq:WP_001077893.1
COORDINATES: similar to AA sequence:RefSeq:WP_015728954.1
COORDINATES: similar to AA sequence:RefSeq:YP_499500.1
GO:0004318 - enoyl-[acyl-carrier-protein] reductase (NADH) activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015365407.1
COORDINATES: similar to AA sequence:RefSeq:WP_000622778.1
quaternary ammonium compound efflux MFS transporter QacA
COORDINATES: similar to AA sequence:RefSeq:WP_001807342.1
multidrug-binding transcriptional regulator QacR
COORDINATES: similar to AA sequence:RefSeq:WP_002474535.1
COORDINATES: similar to AA sequence:RefSeq:WP_000690624.1
COORDINATES: similar to AA sequence:RefSeq:WP_001284656.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001096376.1
beta-lactam sensor/signal transducer BlaR1
COORDINATES: similar to AA sequence:RefSeq:WP_000733274.1
penicillin-hydrolyzing class A beta-lactamase BlaZ
COORDINATES: similar to AA sequence:RefSeq:WP_002455976.1
COORDINATES: protein motif:HMM:NF033608.1
type I toxin-antitoxin system Fst family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_017432088.1