Camelus dromedarius isolate Drom800 breed African chromosome 35, CamDro3, whole genome shotgun sequence.
type: Entry
definition: Camelus dromedarius isolate Drom800 breed African chromosome 35, CamDro3, whole genome shotgun sequence.
sequence version: NC_044545.1
sequence date: 2019-10-23
sequence: sequence
division: CON
label: NC_044545.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA565028
dblink: SAMN03252735
keyword: WGS
keyword: RefSeq
source: Camelus dromedarius (Arabian camel)
organism: Camelus dromedarius
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Tylopoda; Camelidae; Camelus.
reference: 1
references: 30972949
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016661.2.\nAssembly name: CamDro3\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vetmeduni Vienna on\n2019/10/07. The original whole-genome shotgun project has the\naccession JWIN00000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vetmeduni Vienna\nAssembly Date :: FEB-2019\nAssembly Method :: ABySS v. 1.3.6; HiRise v. MAY-2017;\n PBJelly v. 15.8.24; Pilon v. 1.22; ABySS\n Sealer v. 2.0.2; HiRise v. MAY-2018;\n PBJelly v. 15.8.24; BBMAP-CallVariants v.\n 38.12; ABySS Sealer v. 2.1.0\nAssembly Name :: CamDro3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 65.0x\nSequencing Technology :: Illumina HiSeq; Dovetail Hi-C and\n Chicago; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camelus dromedarius Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 26327613
topology: linear
so has quality: SO_0000987
location: 1..26327613
location: region:1-26327613:1
RO_0002162: 9838

NC_044545
type: RefSeq
SIO_000068: refseq

PRJNA565028
type: BioProject
SIO_000068: bioproject

SAMN03252735
type: BioSample
SIO_000068: biosample

1
title: Improving Illumina assemblies with Hi-C and long reads: An example with the North African dromedary
author: Elbers, J.P.
author: Rogers, M.F.
author: Perelman, P.L.
author: Proskuryakova, A.A.
author: Serdyukova, N.A.
author: Johnson, W.E.
author: Horin, P.
author: Corander, J.
author: Murphy, D.
author: Burger, P.A.
journal: Mol Ecol Resour
volume: 19
issue: 4
pages: 1015-1026
year: 2019
pubmed: 30972949

30972949
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26327613:1
position: 26327613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-26327613:1:source
so part of: sequence
organism: Camelus dromedarius
mol type: genomic DNA
isolate: Drom800
isolation source: isolated from an animal called Varis
chromosome: 35
sex: female
tissue type: blood
dev stage: adult
country: Austria: Eithental
collection date: 13-Jan-2013
collected by: Pamela Burger
breed: African

9838
type: Taxonomy
SIO_000068: taxonomy

LOC105099564
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105099564
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 67959..478147
location: region:67959-478147:1
so has part: feature:67959-478147:1:exon
subclass of: SO_0000010

105099564
type: Gene
SIO_000068: ncbigene

position:67959:1
position: 67959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478147:1
position: 478147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67959-478147:1:exon

LOC105099564
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105099564
product: partitioning defective 3 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031444508.1
SIO_010081: LOC105099564
subclass of: SO_0000673
so part of: LOC105099564
location: join(67959..67994,125051..125231,148997..149175,168296..168427,202109..202200,204365..204448,214805..214930,215954..216335,220834..220973,223448..223576,225870..225908,241186..241374,242787..242957,251597..251747,258335..258524,262685..262836,263900..263944,268769..268996,282718..282937,310014..310124,324546..324788,460168..460288,471399..471522,477087..478147)
location: region:67959-478147:1
so has part: feature:67959-67994:1:exon
so has part: feature:125051-125231:1:exon
so has part: feature:148997-149175:1:exon
so has part: feature:168296-168427:1:exon
so has part: feature:202109-202200:1:exon
so has part: feature:204365-204448:1:exon
so has part: feature:214805-214930:1:exon
so has part: feature:215954-216335:1:exon
so has part: feature:220834-220973:1:exon
so has part: feature:223448-223576:1:exon
so has part: feature:225870-225908:1:exon
so has part: feature:241186-241374:1:exon
so has part: feature:242787-242957:1:exon
so has part: feature:251597-251747:1:exon
so has part: feature:258335-258524:1:exon
so has part: feature:262685-262836:1:exon
so has part: feature:263900-263944:1:exon
so has part: feature:268769-268996:1:exon
so has part: feature:282718-282937:1:exon
so has part: feature:310014-310124:1:exon
so has part: feature:324546-324788:1:exon
so has part: feature:460168-460288:1:exon
so has part: feature:471399-471522:1:exon
so has part: feature:477087-478147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67959-67994:1:exon

position:67994:1
position: 67994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125051-125231:1:exon

position:125051:1
position: 125051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125231:1
position: 125231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148997-149175:1:exon

position:148997:1
position: 148997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149175:1
position: 149175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:168296-168427:1:exon

position:168296:1
position: 168296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168427:1
position: 168427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:202109-202200:1:exon

position:202109:1
position: 202109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202200:1
position: 202200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:204365-204448:1:exon

position:204365:1
position: 204365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204448:1
position: 204448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:214805-214930:1:exon

position:214805:1
position: 214805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214930:1
position: 214930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:215954-216335:1:exon

position:215954:1
position: 215954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216335:1
position: 216335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:220834-220973:1:exon

position:220834:1
position: 220834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220973:1
position: 220973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:223448-223576:1:exon

position:223448:1
position: 223448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223576:1
position: 223576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:225870-225908:1:exon

position:225870:1
position: 225870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225908:1
position: 225908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:241186-241374:1:exon

position:241186:1
position: 241186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241374:1
position: 241374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:242787-242957:1:exon

position:242787:1
position: 242787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242957:1
position: 242957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:251597-251747:1:exon

position:251597:1
position: 251597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251747:1
position: 251747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:258335-258524:1:exon

position:258335:1
position: 258335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258524:1
position: 258524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:262685-262836:1:exon

position:262685:1
position: 262685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262836:1
position: 262836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:263900-263944:1:exon

position:263900:1
position: 263900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263944:1
position: 263944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:268769-268996:1:exon

position:268769:1
position: 268769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268996:1
position: 268996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:282718-282937:1:exon

position:282718:1
position: 282718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282937:1
position: 282937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:310014-310124:1:exon

position:310014:1
position: 310014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310124:1
position: 310124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:324546-324788:1:exon

position:324546:1
position: 324546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324788:1
position: 324788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:460168-460288:1:exon

position:460168:1
position: 460168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460288:1
position: 460288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:471399-471522:1:exon

position:471399:1
position: 471399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471522:1
position: 471522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:477087-478147:1:exon

position:477087:1
position: 477087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105099564
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105099564
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: partitioning defective 3 homolog
translation: MRESTCLLIAVFEEQDPHHGGDGTSASSTGTQSPEMFGSELGANSVSAFQPYQATSEIEVTPSVLRANMPLHVRRSSDPALIGLSTSVSDNNFSSEEPSRKNPTRWSTTAGFLKQNMAGSPPACDRKKDENYRSLPRDTSNWSNQFQRDNARSSLSASHPMVDKWLEKQEQDEDGAEEDSSRVEPVGHADTGVENTPSFSLDDMVQLVHVPNDGGPLGIHVVPFSARGGRTLGLLVKRLEKGGKAEQENLFHENDCIVRINDGDLRNRRFEQAQHMFRQAMRTSIIWFHVVPAANKEQYEQLSQSERGGXTAVELQDSQRAEPRGTASACMGPLAAAQRTLRPTPAPRAASPHPRPPRLGATPGRPPAAPTRPPPPSALAGGGYNTKKVGKKLNIQLKKGTEGLGFSITSRDVTIGGLAPVYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEDAFHPRELNAEPRQMQIPKDTKAEDEDPVLTPDGTREFLTFEVPLNDSGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAASKDGRLRVNDQLIAVNGESLLGKTNQDAMETLRRSMSTEGNKRGMIQLIVARRVSRGGELKSPGSPCGPELPVEMVLDDRERRISHSLYSGAEGLDDPPTRNAALSRIMGKYQLSPTVNMPQDDTVIIEDDRLPVLPPHLSDQSSSSSHDDVGFVTTDPGPWAQAGIGDSADCSLSPDVDPVLAFQREGFGRQSMSEKRTKQFSDASQLDFVKTRKSKSMDLGIADETKLSTAGDQKAGSPSRDVGPSLGLKKSSSLESLQTAVAEVTLNGDIPFHRPRPRIIRGRGCNESFRAAIDKSYDKPAMDDDDEGMETLEEDTEESSRSGRESVSTASDQPSHSLERQVNGSPEKTDRRKEKARKEKKDRDKEKEKAKAKKGKLRGLGEMFRFGKHRKDDKIEKTGRIKAREAPPSEEERARMAREQERIQAKTREFRERQARERDYAEIQDFHRAFGCDDELMYGGVSSYEGSMALSARPQSPRDGHMMDALYAQVKKPRNAKPSPADSSRSAPSNHDRIQRLRQEFQQAKQDEDVEERRRTYSFEQPWPSPRPAAQSGRHSVSVEVQMQRQRQEERDSFQQAQRQYSSLPRQSRKNASSVSQDSWEQNYSPGEGFQSAKENPRYSSYQGSRNGYLGGHGFNARVMLETQELLRQEQRRKEQQVKKQPPPEGLGSYDSYKKAQDPSHVPPKGPFRQDVPPSPSQVARLNRLQTPEKGRPFYS
SIO_010081: LOC105099564
subclass of: SO_0000673
so part of: LOC105099564
location: join(67974..67994,125051..125231,148997..149175,168296..168427,202109..202200,204365..204448,214805..214930,215954..216335,220834..220973,223448..223576,225870..225908,241186..241374,242787..242957,251597..251747,258335..258524,262685..262836,263900..263944,268769..268996,282718..282937,310014..310124,324546..324788,460168..460288,471399..471522,477087..477484)
location: region:67974-477484:1
so has part: feature:67974-67994:1:exon
so has part: feature:125051-125231:1:exon
so has part: feature:148997-149175:1:exon
so has part: feature:168296-168427:1:exon
so has part: feature:202109-202200:1:exon
so has part: feature:204365-204448:1:exon
so has part: feature:214805-214930:1:exon
so has part: feature:215954-216335:1:exon
so has part: feature:220834-220973:1:exon
so has part: feature:223448-223576:1:exon
so has part: feature:225870-225908:1:exon
so has part: feature:241186-241374:1:exon
so has part: feature:242787-242957:1:exon
so has part: feature:251597-251747:1:exon
so has part: feature:258335-258524:1:exon
so has part: feature:262685-262836:1:exon
so has part: feature:263900-263944:1:exon
so has part: feature:268769-268996:1:exon
so has part: feature:282718-282937:1:exon
so has part: feature:310014-310124:1:exon
so has part: feature:324546-324788:1:exon
so has part: feature:460168-460288:1:exon
so has part: feature:471399-471522:1:exon
so has part: feature:477087-477484:1:exon

XP_031300368.1
type: Protein
SIO_000068: ncbiprotein

position:67974:1
position: 67974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477484:1
position: 477484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67974-67994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125051-125231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148997-149175:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168296-168427:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202109-202200:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204365-204448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:214805-214930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215954-216335:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:220834-220973:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223448-223576:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225870-225908:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:241186-241374:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:242787-242957:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:251597-251747:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:258335-258524:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:262685-262836:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:263900-263944:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:268769-268996:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:282718-282937:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:310014-310124:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:324546-324788:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:460168-460288:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:471399-471522:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:477087-477484:1:exon

LOC116150483
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(604694..618790)
location: region:604694-618790:-1
so has part: feature:604694-618790:-1:exon
subclass of: SO_0000011

116150483
type: Gene
SIO_000068: ncbigene

position:604694:-1
position: 604694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618790:-1
position: 618790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604694-618790:-1:exon

LOC116150483
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150483
product: uncharacterized LOC116150483, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004134192.1
SIO_010081: LOC116150483
subclass of: SO_0000673
so part of: LOC116150483
location: complement(join(604694..605862,609207..609291,614173..614363,615593..617110,618378..618790))
location: region:604694-618790:-1
so has part: feature:618378-618790:-1:exon
so has part: feature:615593-617110:-1:exon
so has part: feature:614173-614363:-1:exon
so has part: feature:609207-609291:-1:exon
so has part: feature:604694-605862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:618378-618790:-1:exon

position:618378:-1
position: 618378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615593-617110:-1:exon

position:615593:-1
position: 615593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617110:-1
position: 617110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:614173-614363:-1:exon

position:614173:-1
position: 614173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614363:-1
position: 614363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:609207-609291:-1:exon

position:609207:-1
position: 609207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609291:-1
position: 609291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:604694-605862:-1:exon

position:605862:-1
position: 605862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116150483
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150483
product: uncharacterized LOC116150483, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004134191.1
SIO_010081: LOC116150483
subclass of: SO_0000673
so part of: LOC116150483
location: complement(join(608005..609291,614173..614363,615593..617110,618378..618790))
location: region:608005-618790:-1
so has part: feature:618378-618790:-1:exon
so has part: feature:615593-617110:-1:exon
so has part: feature:614173-614363:-1:exon
so has part: feature:608005-609291:-1:exon

position:608005:-1
position: 608005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618378-618790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615593-617110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614173-614363:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608005-609291:-1:exon

LOC116150484
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 657962..667316
location: region:657962-667316:1
so has part: feature:657962-667316:1:exon
subclass of: SO_0000011

116150484
type: Gene
SIO_000068: ncbigene

position:657962:1
position: 657962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667316:1
position: 667316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657962-667316:1:exon

LOC116150484
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150484
product: uncharacterized LOC116150484, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004134193.1
SIO_010081: LOC116150484
subclass of: SO_0000673
so part of: LOC116150484
location: join(657962..665200,665525..667316)
location: region:657962-667316:1
so has part: feature:657962-665200:1:exon
so has part: feature:665525-667316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:657962-665200:1:exon

position:665200:1
position: 665200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:665525-667316:1:exon

position:665525:1
position: 665525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116150484
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150484
product: uncharacterized LOC116150484, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004134195.1
SIO_010081: LOC116150484
subclass of: SO_0000673
so part of: LOC116150484
location: join(657962..664733,665036..665200,665525..667316)
location: region:657962-667316:1
so has part: feature:657962-664733:1:exon
so has part: feature:665036-665200:1:exon
so has part: feature:665525-667316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:657962-664733:1:exon

position:664733:1
position: 664733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:665036-665200:1:exon

position:665036:1
position: 665036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:665525-667316:1:exon

LOC116150484
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150484
product: uncharacterized LOC116150484, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004134196.1
SIO_010081: LOC116150484
subclass of: SO_0000673
so part of: LOC116150484
location: join(657962..663811,665036..665200,665525..667316)
location: region:657962-667316:1
so has part: feature:657962-663811:1:exon
so has part: feature:665036-665200:1:exon
so has part: feature:665525-667316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:657962-663811:1:exon

position:663811:1
position: 663811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:665036-665200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665525-667316:1:exon

LOC116150484
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150484
product: uncharacterized LOC116150484, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004134194.1
SIO_010081: LOC116150484
subclass of: SO_0000673
so part of: LOC116150484
location: join(657968..665200,665525..666154,666697..667316)
location: region:657968-667316:1
so has part: feature:657968-665200:1:exon
so has part: feature:665525-666154:1:exon
so has part: feature:666697-667316:1:exon

position:657968:1
position: 657968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657968-665200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:665525-666154:1:exon

position:666154:1
position: 666154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:666697-667316:1:exon

position:666697:1
position: 666697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: NRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1076361..1212775
location: region:1076361-1212775:1
so has part: feature:1076361-1212775:1:exon
subclass of: SO_0000010

105100649
type: Gene
SIO_000068: ncbigene

position:1076361:1
position: 1076361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212775:1
position: 1212775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076361-1212775:1:exon

NRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NRP1
product: neuropilin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_031444509.1
SIO_010081: NRP1
subclass of: SO_0000673
so part of: NRP1
location: join(1076361..1076908,1080255..1080429,1128253..1128434,1134574..1134801,1140639..1140794,1143279..1143445,1166734..1166889,1167804..1167948,1175900..1176231,1181335..1181479,1185248..1185352,1189492..1189551,1195115..1195252,1199143..1199417,1200159..1200255,1202351..1202401,1209924..1212775)
location: region:1076361-1212775:1
so has part: feature:1076361-1076908:1:exon
so has part: feature:1080255-1080429:1:exon
so has part: feature:1128253-1128434:1:exon
so has part: feature:1134574-1134801:1:exon
so has part: feature:1140639-1140794:1:exon
so has part: feature:1143279-1143445:1:exon
so has part: feature:1166734-1166889:1:exon
so has part: feature:1167804-1167948:1:exon
so has part: feature:1175900-1176231:1:exon
so has part: feature:1181335-1181479:1:exon
so has part: feature:1185248-1185352:1:exon
so has part: feature:1189492-1189551:1:exon
so has part: feature:1195115-1195252:1:exon
so has part: feature:1199143-1199417:1:exon
so has part: feature:1200159-1200255:1:exon
so has part: feature:1202351-1202401:1:exon
so has part: feature:1209924-1212775:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1076361-1076908:1:exon

position:1076908:1
position: 1076908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1080255-1080429:1:exon

position:1080255:1
position: 1080255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080429:1
position: 1080429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1128253-1128434:1:exon

position:1128253:1
position: 1128253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128434:1
position: 1128434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1134574-1134801:1:exon

position:1134574:1
position: 1134574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134801:1
position: 1134801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1140639-1140794:1:exon

position:1140639:1
position: 1140639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140794:1
position: 1140794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1143279-1143445:1:exon

position:1143279:1
position: 1143279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143445:1
position: 1143445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1166734-1166889:1:exon

position:1166734:1
position: 1166734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1166889:1
position: 1166889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1167804-1167948:1:exon

position:1167804:1
position: 1167804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167948:1
position: 1167948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1175900-1176231:1:exon

position:1175900:1
position: 1175900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176231:1
position: 1176231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1181335-1181479:1:exon

position:1181335:1
position: 1181335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181479:1
position: 1181479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1185248-1185352:1:exon

position:1185248:1
position: 1185248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185352:1
position: 1185352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1189492-1189551:1:exon

position:1189492:1
position: 1189492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189551:1
position: 1189551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1195115-1195252:1:exon

position:1195115:1
position: 1195115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195252:1
position: 1195252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1199143-1199417:1:exon

position:1199143:1
position: 1199143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199417:1
position: 1199417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1200159-1200255:1:exon

position:1200159:1
position: 1200159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200255:1
position: 1200255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1202351-1202401:1:exon

position:1202351:1
position: 1202351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202401:1
position: 1202401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1209924-1212775:1:exon

position:1209924:1
position: 1209924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NRP1
product: neuropilin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_031444510.1
SIO_010081: NRP1
subclass of: SO_0000673
so part of: NRP1
location: join(1076361..1076908,1080255..1080429,1128253..1128434,1134574..1134801,1140639..1140794,1143279..1143445,1166734..1166889,1167804..1167948,1175900..1176231,1181335..1181479,1185248..1185352,1189492..1189551,1195115..1195252,1199143..1199417,1200159..1200255,1202351..1202401,1209924..1210233,1210555..1212775)
location: region:1076361-1212775:1
so has part: feature:1076361-1076908:1:exon
so has part: feature:1080255-1080429:1:exon
so has part: feature:1128253-1128434:1:exon
so has part: feature:1134574-1134801:1:exon
so has part: feature:1140639-1140794:1:exon
so has part: feature:1143279-1143445:1:exon
so has part: feature:1166734-1166889:1:exon
so has part: feature:1167804-1167948:1:exon
so has part: feature:1175900-1176231:1:exon
so has part: feature:1181335-1181479:1:exon
so has part: feature:1185248-1185352:1:exon
so has part: feature:1189492-1189551:1:exon
so has part: feature:1195115-1195252:1:exon
so has part: feature:1199143-1199417:1:exon
so has part: feature:1200159-1200255:1:exon
so has part: feature:1202351-1202401:1:exon
so has part: feature:1209924-1210233:1:exon
so has part: feature:1210555-1212775:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1076361-1076908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080255-1080429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1128253-1128434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134574-1134801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140639-1140794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1143279-1143445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166734-1166889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167804-1167948:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1175900-1176231:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1181335-1181479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185248-1185352:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1189492-1189551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195115-1195252:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199143-1199417:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1200159-1200255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1202351-1202401:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1209924-1210233:1:exon

position:1210233:1
position: 1210233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1210555-1212775:1:exon

position:1210555:1
position: 1210555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NRP1
product: neuropilin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_031444512.1
SIO_010081: NRP1
subclass of: SO_0000673
so part of: NRP1
location: join(1076361..1076908,1080255..1080429,1128253..1128434,1134574..1134801,1140639..1140794,1143279..1143445,1166734..1166889,1167804..1167948,1175900..1176231,1181335..1181479,1185248..1185331,1189492..1189551,1195115..1195252,1199143..1199417,1200159..1200255,1202351..1202401,1209924..1212775)
location: region:1076361-1212775:1
so has part: feature:1076361-1076908:1:exon
so has part: feature:1080255-1080429:1:exon
so has part: feature:1128253-1128434:1:exon
so has part: feature:1134574-1134801:1:exon
so has part: feature:1140639-1140794:1:exon
so has part: feature:1143279-1143445:1:exon
so has part: feature:1166734-1166889:1:exon
so has part: feature:1167804-1167948:1:exon
so has part: feature:1175900-1176231:1:exon
so has part: feature:1181335-1181479:1:exon
so has part: feature:1185248-1185331:1:exon
so has part: feature:1189492-1189551:1:exon
so has part: feature:1195115-1195252:1:exon
so has part: feature:1199143-1199417:1:exon
so has part: feature:1200159-1200255:1:exon
so has part: feature:1202351-1202401:1:exon
so has part: feature:1209924-1212775:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1076361-1076908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080255-1080429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1128253-1128434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134574-1134801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140639-1140794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1143279-1143445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166734-1166889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167804-1167948:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1175900-1176231:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1181335-1181479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185248-1185331:1:exon

position:1185331:1
position: 1185331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1189492-1189551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195115-1195252:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199143-1199417:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1200159-1200255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1202351-1202401:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1209924-1212775:1:exon

NRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NRP1
product: neuropilin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_031444511.1
SIO_010081: NRP1
subclass of: SO_0000673
so part of: NRP1
location: join(1076363..1076908,1080255..1080429,1128253..1128434,1134574..1134801,1140639..1140794,1143279..1143445,1166734..1166889,1167804..1167948,1175900..1176231,1181335..1181479,1185248..1185352,1189492..1189551,1195115..1195252,1199146..1199417,1200159..1200255,1202351..1202401,1209924..1212775)
location: region:1076363-1212775:1
so has part: feature:1076363-1076908:1:exon
so has part: feature:1080255-1080429:1:exon
so has part: feature:1128253-1128434:1:exon
so has part: feature:1134574-1134801:1:exon
so has part: feature:1140639-1140794:1:exon
so has part: feature:1143279-1143445:1:exon
so has part: feature:1166734-1166889:1:exon
so has part: feature:1167804-1167948:1:exon
so has part: feature:1175900-1176231:1:exon
so has part: feature:1181335-1181479:1:exon
so has part: feature:1185248-1185352:1:exon
so has part: feature:1189492-1189551:1:exon
so has part: feature:1195115-1195252:1:exon
so has part: feature:1199146-1199417:1:exon
so has part: feature:1200159-1200255:1:exon
so has part: feature:1202351-1202401:1:exon
so has part: feature:1209924-1212775:1:exon

position:1076363:1
position: 1076363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076363-1076908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080255-1080429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1128253-1128434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134574-1134801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140639-1140794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1143279-1143445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166734-1166889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167804-1167948:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1175900-1176231:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1181335-1181479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185248-1185352:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1189492-1189551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195115-1195252:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199146-1199417:1:exon

position:1199146:1
position: 1199146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1200159-1200255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1202351-1202401:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1209924-1212775:1:exon

NRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NRP1
product: neuropilin 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_031444513.1
SIO_010081: NRP1
subclass of: SO_0000673
so part of: NRP1
location: join(1076363..1076908,1080255..1080429,1128253..1128434,1134574..1134801,1140639..1140794,1143279..1143445,1166734..1166889,1167804..1167948,1175900..1176231,1181335..1181479,1185248..1185331,1189492..1189551,1195115..1195252,1199146..1199417,1200159..1200255,1202351..1202401,1209924..1212775)
location: region:1076363-1212775:1
so has part: feature:1076363-1076908:1:exon
so has part: feature:1080255-1080429:1:exon
so has part: feature:1128253-1128434:1:exon
so has part: feature:1134574-1134801:1:exon
so has part: feature:1140639-1140794:1:exon
so has part: feature:1143279-1143445:1:exon
so has part: feature:1166734-1166889:1:exon
so has part: feature:1167804-1167948:1:exon
so has part: feature:1175900-1176231:1:exon
so has part: feature:1181335-1181479:1:exon
so has part: feature:1185248-1185331:1:exon
so has part: feature:1189492-1189551:1:exon
so has part: feature:1195115-1195252:1:exon
so has part: feature:1199146-1199417:1:exon
so has part: feature:1200159-1200255:1:exon
so has part: feature:1202351-1202401:1:exon
so has part: feature:1209924-1212775:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1076363-1076908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080255-1080429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1128253-1128434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134574-1134801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140639-1140794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1143279-1143445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166734-1166889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167804-1167948:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1175900-1176231:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1181335-1181479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185248-1185331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1189492-1189551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195115-1195252:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199146-1199417:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1200159-1200255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1202351-1202401:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1209924-1212775:1:exon

NRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin-1 isoform X1
translation: MERGLPLLCAALALAVAAAAAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQAPDPYQRIMINFNPHFDLEDRDCKYDYVEVIDGENENGRLWGKFCGKIAPSPVVSSGPFLFIKFVSDYETHGAGFSIRYEIFKRGPECSQNYTAPSGVIKSPGFPEKYPNSLECTYIIFAPKMSEIILEFESFDLEPDSNPPGGMICRYDRLEIWDGFPNVGPHIGHYCGQKTPGRIRASSGILSMVFYTDSAIAKEGFSANYSILQSSISEDFKCMEALGMESGEIHSDQITASSQYSTNWSAERSRLHYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYRIEISSNGEDWITIKEGNKPLIFQGNTNPTDVVFGVFPKPLITRFVRIKPMTWETGISLRFEVYGCKITDYPCSGMLGMVSGLISDSQITASNQGERNWMPENIRLVTSRSGWALPPAPHPYVNEWLQVDLGEEKIVRGVIIQGGKHRENKVFMRKFKIGYSNNGSDWKMLMDEGRHKPKSFEGNNNYDTPELRTFPPLSTRFVRIYPERATHGGLGLRMELLGCELEAPTAGPTTPNGNLVDECDDDQTSCHSGTGDDFQLTGGTTVLTTEKPTAIDSTPQPEFPTYGFNCEFGWGSHKTFCHWEHDNHVQLKWSVLTSKTGPIQDHTAGDGNFLYSQADENQKGKVARLVSPVVYSQNSAHCMTFWYHMSGSHVGTLRVKLRYQKPEEYDQLVWMAIGHQGDHWKEGRVLLHKSLKLYQVIFEGEIGKGSLGGIAVDDIRINNHIPQEDCTKPEDLDKKNPENKMDETGSTQGYEGVGEGEEKISRKPGSVLKTLDPILITIIAMSALGVLLGAVCGVVLYCACWHNGMSERNLSALENYNFELVDGVKLKKDKLNSQSTYSEA
SIO_010081: NRP1
subclass of: SO_0000673
so part of: NRP1
location: join(1076836..1076908,1080255..1080429,1128253..1128434,1134574..1134801,1140639..1140794,1143279..1143445,1166734..1166889,1167804..1167948,1175900..1176231,1181335..1181479,1185248..1185352,1189492..1189551,1195115..1195252,1199143..1199417,1200159..1200255,1202351..1202401,1209924..1210213)
location: region:1076836-1210213:1
so has part: feature:1076836-1076908:1:exon
so has part: feature:1080255-1080429:1:exon
so has part: feature:1128253-1128434:1:exon
so has part: feature:1134574-1134801:1:exon
so has part: feature:1140639-1140794:1:exon
so has part: feature:1143279-1143445:1:exon
so has part: feature:1166734-1166889:1:exon
so has part: feature:1167804-1167948:1:exon
so has part: feature:1175900-1176231:1:exon
so has part: feature:1181335-1181479:1:exon
so has part: feature:1185248-1185352:1:exon
so has part: feature:1189492-1189551:1:exon
so has part: feature:1195115-1195252:1:exon
so has part: feature:1199143-1199417:1:exon
so has part: feature:1200159-1200255:1:exon
so has part: feature:1202351-1202401:1:exon
so has part: feature:1209924-1210213:1:exon

XP_031300369.1
type: Protein
SIO_000068: ncbiprotein

position:1076836:1
position: 1076836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1210213:1
position: 1210213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076836-1076908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080255-1080429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1128253-1128434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134574-1134801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140639-1140794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1143279-1143445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166734-1166889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167804-1167948:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1175900-1176231:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1181335-1181479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185248-1185352:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1189492-1189551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195115-1195252:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199143-1199417:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1200159-1200255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1202351-1202401:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1209924-1210213:1:exon

NRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin-1 isoform X1
translation: MERGLPLLCAALALAVAAAAAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQAPDPYQRIMINFNPHFDLEDRDCKYDYVEVIDGENENGRLWGKFCGKIAPSPVVSSGPFLFIKFVSDYETHGAGFSIRYEIFKRGPECSQNYTAPSGVIKSPGFPEKYPNSLECTYIIFAPKMSEIILEFESFDLEPDSNPPGGMICRYDRLEIWDGFPNVGPHIGHYCGQKTPGRIRASSGILSMVFYTDSAIAKEGFSANYSILQSSISEDFKCMEALGMESGEIHSDQITASSQYSTNWSAERSRLHYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYRIEISSNGEDWITIKEGNKPLIFQGNTNPTDVVFGVFPKPLITRFVRIKPMTWETGISLRFEVYGCKITDYPCSGMLGMVSGLISDSQITASNQGERNWMPENIRLVTSRSGWALPPAPHPYVNEWLQVDLGEEKIVRGVIIQGGKHRENKVFMRKFKIGYSNNGSDWKMLMDEGRHKPKSFEGNNNYDTPELRTFPPLSTRFVRIYPERATHGGLGLRMELLGCELEAPTAGPTTPNGNLVDECDDDQTSCHSGTGDDFQLTGGTTVLTTEKPTAIDSTPQPEFPTYGFNCEFGWGSHKTFCHWEHDNHVQLKWSVLTSKTGPIQDHTAGDGNFLYSQADENQKGKVARLVSPVVYSQNSAHCMTFWYHMSGSHVGTLRVKLRYQKPEEYDQLVWMAIGHQGDHWKEGRVLLHKSLKLYQVIFEGEIGKGSLGGIAVDDIRINNHIPQEDCTKPEDLDKKNPENKMDETGSTQGYEGVGEGEEKISRKPGSVLKTLDPILITIIAMSALGVLLGAVCGVVLYCACWHNGMSERNLSALENYNFELVDGVKLKKDKLNSQSTYSEA
SIO_010081: NRP1
subclass of: SO_0000673
so part of: NRP1
location: join(1076836..1076908,1080255..1080429,1128253..1128434,1134574..1134801,1140639..1140794,1143279..1143445,1166734..1166889,1167804..1167948,1175900..1176231,1181335..1181479,1185248..1185352,1189492..1189551,1195115..1195252,1199143..1199417,1200159..1200255,1202351..1202401,1209924..1210213)
location: region:1076836-1210213:1
so has part: feature:1076836-1076908:1:exon
so has part: feature:1080255-1080429:1:exon
so has part: feature:1128253-1128434:1:exon
so has part: feature:1134574-1134801:1:exon
so has part: feature:1140639-1140794:1:exon
so has part: feature:1143279-1143445:1:exon
so has part: feature:1166734-1166889:1:exon
so has part: feature:1167804-1167948:1:exon
so has part: feature:1175900-1176231:1:exon
so has part: feature:1181335-1181479:1:exon
so has part: feature:1185248-1185352:1:exon
so has part: feature:1189492-1189551:1:exon
so has part: feature:1195115-1195252:1:exon
so has part: feature:1199143-1199417:1:exon
so has part: feature:1200159-1200255:1:exon
so has part: feature:1202351-1202401:1:exon
so has part: feature:1209924-1210213:1:exon

XP_031300370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1076836-1076908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080255-1080429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1128253-1128434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134574-1134801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140639-1140794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1143279-1143445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166734-1166889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167804-1167948:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1175900-1176231:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1181335-1181479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185248-1185352:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1189492-1189551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195115-1195252:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199143-1199417:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1200159-1200255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1202351-1202401:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1209924-1210213:1:exon

NRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin-1 isoform X2
translation: MERGLPLLCAALALAVAAAAAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQAPDPYQRIMINFNPHFDLEDRDCKYDYVEVIDGENENGRLWGKFCGKIAPSPVVSSGPFLFIKFVSDYETHGAGFSIRYEIFKRGPECSQNYTAPSGVIKSPGFPEKYPNSLECTYIIFAPKMSEIILEFESFDLEPDSNPPGGMICRYDRLEIWDGFPNVGPHIGHYCGQKTPGRIRASSGILSMVFYTDSAIAKEGFSANYSILQSSISEDFKCMEALGMESGEIHSDQITASSQYSTNWSAERSRLHYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYRIEISSNGEDWITIKEGNKPLIFQGNTNPTDVVFGVFPKPLITRFVRIKPMTWETGISLRFEVYGCKITDYPCSGMLGMVSGLISDSQITASNQGERNWMPENIRLVTSRSGWALPPAPHPYVNEWLQVDLGEEKIVRGVIIQGGKHRENKVFMRKFKIGYSNNGSDWKMLMDEGRHKPKSFEGNNNYDTPELRTFPPLSTRFVRIYPERATHGGLGLRMELLGCELEAPTAGPTTPNGNLVDECDDDQTSCHSGTGDDFQLTGGTTVLTTEKPTAIDSTPQPEFPTYGFNCEFGWGSHKTFCHWEHDNHVQLKWSVLTSKTGPIQDHTGDGNFLYSQADENQKGKVARLVSPVVYSQNSAHCMTFWYHMSGSHVGTLRVKLRYQKPEEYDQLVWMAIGHQGDHWKEGRVLLHKSLKLYQVIFEGEIGKGSLGGIAVDDIRINNHIPQEDCTKPEDLDKKNPENKMDETGSTQGYEGVGEGEEKISRKPGSVLKTLDPILITIIAMSALGVLLGAVCGVVLYCACWHNGMSERNLSALENYNFELVDGVKLKKDKLNSQSTYSEA
SIO_010081: NRP1
subclass of: SO_0000673
so part of: NRP1
location: join(1076836..1076908,1080255..1080429,1128253..1128434,1134574..1134801,1140639..1140794,1143279..1143445,1166734..1166889,1167804..1167948,1175900..1176231,1181335..1181479,1185248..1185352,1189492..1189551,1195115..1195252,1199146..1199417,1200159..1200255,1202351..1202401,1209924..1210213)
location: region:1076836-1210213:1
so has part: feature:1076836-1076908:1:exon
so has part: feature:1080255-1080429:1:exon
so has part: feature:1128253-1128434:1:exon
so has part: feature:1134574-1134801:1:exon
so has part: feature:1140639-1140794:1:exon
so has part: feature:1143279-1143445:1:exon
so has part: feature:1166734-1166889:1:exon
so has part: feature:1167804-1167948:1:exon
so has part: feature:1175900-1176231:1:exon
so has part: feature:1181335-1181479:1:exon
so has part: feature:1185248-1185352:1:exon
so has part: feature:1189492-1189551:1:exon
so has part: feature:1195115-1195252:1:exon
so has part: feature:1199146-1199417:1:exon
so has part: feature:1200159-1200255:1:exon
so has part: feature:1202351-1202401:1:exon
so has part: feature:1209924-1210213:1:exon

XP_031300371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1076836-1076908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080255-1080429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1128253-1128434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134574-1134801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140639-1140794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1143279-1143445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166734-1166889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167804-1167948:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1175900-1176231:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1181335-1181479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185248-1185352:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1189492-1189551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195115-1195252:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199146-1199417:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1200159-1200255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1202351-1202401:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1209924-1210213:1:exon

NRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin-1 isoform X3
translation: MERGLPLLCAALALAVAAAAAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQAPDPYQRIMINFNPHFDLEDRDCKYDYVEVIDGENENGRLWGKFCGKIAPSPVVSSGPFLFIKFVSDYETHGAGFSIRYEIFKRGPECSQNYTAPSGVIKSPGFPEKYPNSLECTYIIFAPKMSEIILEFESFDLEPDSNPPGGMICRYDRLEIWDGFPNVGPHIGHYCGQKTPGRIRASSGILSMVFYTDSAIAKEGFSANYSILQSSISEDFKCMEALGMESGEIHSDQITASSQYSTNWSAERSRLHYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYRIEISSNGEDWITIKEGNKPLIFQGNTNPTDVVFGVFPKPLITRFVRIKPMTWETGISLRFEVYGCKITDYPCSGMLGMVSGLISDSQITASNQGERNWMPENIRLVTSRSGWALPPAPHPYVNEWLQVDLGEEKIVRGVIIQGGKHRENKVFMRKFKIGYSNNGSDWKMLMDEGRHKPKSFEGNNNYDTPELRTFPPLSTRFVRIYPERATHGGLGLRMELLGCELEAPTAGPTTPNGNLVDECDDDQTSCHSGTGGTTVLTTEKPTAIDSTPQPEFPTYGFNCEFGWGSHKTFCHWEHDNHVQLKWSVLTSKTGPIQDHTAGDGNFLYSQADENQKGKVARLVSPVVYSQNSAHCMTFWYHMSGSHVGTLRVKLRYQKPEEYDQLVWMAIGHQGDHWKEGRVLLHKSLKLYQVIFEGEIGKGSLGGIAVDDIRINNHIPQEDCTKPEDLDKKNPENKMDETGSTQGYEGVGEGEEKISRKPGSVLKTLDPILITIIAMSALGVLLGAVCGVVLYCACWHNGMSERNLSALENYNFELVDGVKLKKDKLNSQSTYSEA
SIO_010081: NRP1
subclass of: SO_0000673
so part of: NRP1
location: join(1076836..1076908,1080255..1080429,1128253..1128434,1134574..1134801,1140639..1140794,1143279..1143445,1166734..1166889,1167804..1167948,1175900..1176231,1181335..1181479,1185248..1185331,1189492..1189551,1195115..1195252,1199143..1199417,1200159..1200255,1202351..1202401,1209924..1210213)
location: region:1076836-1210213:1
so has part: feature:1076836-1076908:1:exon
so has part: feature:1080255-1080429:1:exon
so has part: feature:1128253-1128434:1:exon
so has part: feature:1134574-1134801:1:exon
so has part: feature:1140639-1140794:1:exon
so has part: feature:1143279-1143445:1:exon
so has part: feature:1166734-1166889:1:exon
so has part: feature:1167804-1167948:1:exon
so has part: feature:1175900-1176231:1:exon
so has part: feature:1181335-1181479:1:exon
so has part: feature:1185248-1185331:1:exon
so has part: feature:1189492-1189551:1:exon
so has part: feature:1195115-1195252:1:exon
so has part: feature:1199143-1199417:1:exon
so has part: feature:1200159-1200255:1:exon
so has part: feature:1202351-1202401:1:exon
so has part: feature:1209924-1210213:1:exon

XP_031300372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1076836-1076908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080255-1080429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1128253-1128434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134574-1134801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140639-1140794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1143279-1143445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166734-1166889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167804-1167948:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1175900-1176231:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1181335-1181479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185248-1185331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1189492-1189551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195115-1195252:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199143-1199417:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1200159-1200255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1202351-1202401:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1209924-1210213:1:exon

NRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin-1 isoform X4
translation: MERGLPLLCAALALAVAAAAAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQAPDPYQRIMINFNPHFDLEDRDCKYDYVEVIDGENENGRLWGKFCGKIAPSPVVSSGPFLFIKFVSDYETHGAGFSIRYEIFKRGPECSQNYTAPSGVIKSPGFPEKYPNSLECTYIIFAPKMSEIILEFESFDLEPDSNPPGGMICRYDRLEIWDGFPNVGPHIGHYCGQKTPGRIRASSGILSMVFYTDSAIAKEGFSANYSILQSSISEDFKCMEALGMESGEIHSDQITASSQYSTNWSAERSRLHYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYRIEISSNGEDWITIKEGNKPLIFQGNTNPTDVVFGVFPKPLITRFVRIKPMTWETGISLRFEVYGCKITDYPCSGMLGMVSGLISDSQITASNQGERNWMPENIRLVTSRSGWALPPAPHPYVNEWLQVDLGEEKIVRGVIIQGGKHRENKVFMRKFKIGYSNNGSDWKMLMDEGRHKPKSFEGNNNYDTPELRTFPPLSTRFVRIYPERATHGGLGLRMELLGCELEAPTAGPTTPNGNLVDECDDDQTSCHSGTGGTTVLTTEKPTAIDSTPQPEFPTYGFNCEFGWGSHKTFCHWEHDNHVQLKWSVLTSKTGPIQDHTGDGNFLYSQADENQKGKVARLVSPVVYSQNSAHCMTFWYHMSGSHVGTLRVKLRYQKPEEYDQLVWMAIGHQGDHWKEGRVLLHKSLKLYQVIFEGEIGKGSLGGIAVDDIRINNHIPQEDCTKPEDLDKKNPENKMDETGSTQGYEGVGEGEEKISRKPGSVLKTLDPILITIIAMSALGVLLGAVCGVVLYCACWHNGMSERNLSALENYNFELVDGVKLKKDKLNSQSTYSEA
SIO_010081: NRP1
subclass of: SO_0000673
so part of: NRP1
location: join(1076836..1076908,1080255..1080429,1128253..1128434,1134574..1134801,1140639..1140794,1143279..1143445,1166734..1166889,1167804..1167948,1175900..1176231,1181335..1181479,1185248..1185331,1189492..1189551,1195115..1195252,1199146..1199417,1200159..1200255,1202351..1202401,1209924..1210213)
location: region:1076836-1210213:1
so has part: feature:1076836-1076908:1:exon
so has part: feature:1080255-1080429:1:exon
so has part: feature:1128253-1128434:1:exon
so has part: feature:1134574-1134801:1:exon
so has part: feature:1140639-1140794:1:exon
so has part: feature:1143279-1143445:1:exon
so has part: feature:1166734-1166889:1:exon
so has part: feature:1167804-1167948:1:exon
so has part: feature:1175900-1176231:1:exon
so has part: feature:1181335-1181479:1:exon
so has part: feature:1185248-1185331:1:exon
so has part: feature:1189492-1189551:1:exon
so has part: feature:1195115-1195252:1:exon
so has part: feature:1199146-1199417:1:exon
so has part: feature:1200159-1200255:1:exon
so has part: feature:1202351-1202401:1:exon
so has part: feature:1209924-1210213:1:exon

XP_031300373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1076836-1076908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080255-1080429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1128253-1128434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1134574-1134801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140639-1140794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1143279-1143445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166734-1166889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167804-1167948:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1175900-1176231:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1181335-1181479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185248-1185331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1189492-1189551:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195115-1195252:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199146-1199417:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1200159-1200255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1202351-1202401:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1209924-1210213:1:exon

TRNAA-CGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAA-CGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1290245..1290316
location: region:1290245-1290316:1
so has part: feature:1290245-1290316:1:exon
subclass of: SO_0000663

116150609
type: Gene
SIO_000068: ncbigene

position:1290245:1
position: 1290245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1290316:1
position: 1290316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290245-1290316:1:exon

TRNAA-CGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAA-CGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon CGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1290277..1290279,aa:Ala,seq:cgc)
SIO_010081: TRNAA-CGC
subclass of: SO_0000673
so part of: TRNAA-CGC
location: 1290245..1290316
location: region:1290245-1290316:1
so has part: feature:1290245-1290316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290245-1290316:1:exon

LOC116150486
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1316917..1318135
location: region:1316917-1318135:1
so has part: feature:1316917-1318135:1:exon
subclass of: SO_0000010

116150486
type: Gene
SIO_000068: ncbigene

position:1316917:1
position: 1316917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1318135:1
position: 1318135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1316917-1318135:1:exon

LOC116150486
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC116150486
product: non-histone chromosomal protein HMG-14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031444514.1
SIO_010081: LOC116150486
subclass of: SO_0000673
so part of: LOC116150486
location: 1316917..1318135
location: region:1316917-1318135:1
so has part: feature:1316917-1318135:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1316917-1318135:1:exon

LOC116150486
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC116150486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: non-histone chromosomal protein HMG-14
translation: MPKRKVSSAEGAAKEEPKRRSARLSAKPAPAKVETKPKKAAGKDKSSDKKVQTKGKRGAKGKQAEVANQETKEDLPAENGETKNEESPTSDEAGEKEAKSD
SIO_010081: LOC116150486
subclass of: SO_0000673
so part of: LOC116150486
location: 1317013..1317318
location: region:1317013-1317318:1
so has part: feature:1317013-1317318:1:exon

XP_031300374.1
type: Protein
SIO_000068: ncbiprotein

position:1317013:1
position: 1317013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317318:1
position: 1317318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1317013-1317318:1:exon

LOC116150488
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150488
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1327032..1348740)
location: region:1327032-1348740:-1
so has part: feature:1327032-1348740:-1:exon
subclass of: SO_0000011

116150488
type: Gene
SIO_000068: ncbigene

position:1327032:-1
position: 1327032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348740:-1
position: 1348740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327032-1348740:-1:exon

LOC116150488
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150488
product: uncharacterized LOC116150488, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004134198.1
SIO_010081: LOC116150488
subclass of: SO_0000673
so part of: LOC116150488
location: complement(join(1327032..1327776,1337710..1337801,1348227..1348740))
location: region:1327032-1348740:-1
so has part: feature:1348227-1348740:-1:exon
so has part: feature:1337710-1337801:-1:exon
so has part: feature:1327032-1327776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1348227-1348740:-1:exon

position:1348227:-1
position: 1348227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1337710-1337801:-1:exon

position:1337710:-1
position: 1337710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337801:-1
position: 1337801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1327032-1327776:-1:exon

position:1327776:-1
position: 1327776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116150488
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150488
product: uncharacterized LOC116150488, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004134199.1
SIO_010081: LOC116150488
subclass of: SO_0000673
so part of: LOC116150488
location: complement(join(1327032..1327776,1337710..1337801,1347248..1347343,1348227..1348740))
location: region:1327032-1348740:-1
so has part: feature:1348227-1348740:-1:exon
so has part: feature:1347248-1347343:-1:exon
so has part: feature:1337710-1337801:-1:exon
so has part: feature:1327032-1327776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1348227-1348740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1347248-1347343:-1:exon

position:1347248:-1
position: 1347248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347343:-1
position: 1347343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1337710-1337801:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1327032-1327776:-1:exon

ITGB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ITGB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1348834..1387705
location: region:1348834-1387705:1
so has part: feature:1348834-1387705:1:exon
subclass of: SO_0000010

105100650
type: Gene
SIO_000068: ncbigene

position:1348834:1
position: 1348834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387705:1
position: 1387705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348834-1387705:1:exon

ITGB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ITGB1
product: integrin subunit beta 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_031444518.1
SIO_010081: ITGB1
subclass of: SO_0000673
so part of: ITGB1
location: join(1348834..1349013,1365372..1365438,1366175..1366260,1368947..1369169,1370554..1370724,1371241..1371479,1373225..1373380,1374117..1374212,1374519..1374608,1376020..1376160,1376324..1376523,1377804..1378042,1378323..1378545,1379162..1379394,1380721..1380887,1386499..1387705)
location: region:1348834-1387705:1
so has part: feature:1348834-1349013:1:exon
so has part: feature:1365372-1365438:1:exon
so has part: feature:1366175-1366260:1:exon
so has part: feature:1368947-1369169:1:exon
so has part: feature:1370554-1370724:1:exon
so has part: feature:1371241-1371479:1:exon
so has part: feature:1373225-1373380:1:exon
so has part: feature:1374117-1374212:1:exon
so has part: feature:1374519-1374608:1:exon
so has part: feature:1376020-1376160:1:exon
so has part: feature:1376324-1376523:1:exon
so has part: feature:1377804-1378042:1:exon
so has part: feature:1378323-1378545:1:exon
so has part: feature:1379162-1379394:1:exon
so has part: feature:1380721-1380887:1:exon
so has part: feature:1386499-1387705:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1348834-1349013:1:exon

position:1349013:1
position: 1349013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1365372-1365438:1:exon

position:1365372:1
position: 1365372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1365438:1
position: 1365438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1366175-1366260:1:exon

position:1366175:1
position: 1366175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1366260:1
position: 1366260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1368947-1369169:1:exon

position:1368947:1
position: 1368947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1369169:1
position: 1369169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1370554-1370724:1:exon

position:1370554:1
position: 1370554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370724:1
position: 1370724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1371241-1371479:1:exon

position:1371241:1
position: 1371241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1371479:1
position: 1371479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1373225-1373380:1:exon

position:1373225:1
position: 1373225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373380:1
position: 1373380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1374117-1374212:1:exon

position:1374117:1
position: 1374117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1374212:1
position: 1374212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1374519-1374608:1:exon

position:1374519:1
position: 1374519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1374608:1
position: 1374608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1376020-1376160:1:exon

position:1376020:1
position: 1376020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376160:1
position: 1376160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1376324-1376523:1:exon

position:1376324:1
position: 1376324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376523:1
position: 1376523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1377804-1378042:1:exon

position:1377804:1
position: 1377804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378042:1
position: 1378042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1378323-1378545:1:exon

position:1378323:1
position: 1378323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378545:1
position: 1378545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1379162-1379394:1:exon

position:1379162:1
position: 1379162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379394:1
position: 1379394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1380721-1380887:1:exon

position:1380721:1
position: 1380721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380887:1
position: 1380887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1386499-1387705:1:exon

position:1386499:1
position: 1386499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ITGB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ITGB1
product: integrin subunit beta 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031444515.1
SIO_010081: ITGB1
subclass of: SO_0000673
so part of: ITGB1
location: join(1348834..1349013,1365372..1365438,1366175..1366260,1368947..1369169,1370554..1370724,1371241..1371479,1373225..1373380,1374117..1374212,1374519..1374608,1376020..1376160,1376324..1376523,1377804..1378042,1378323..1378545,1379162..1379394,1380721..1380887,1381793..1384963)
location: region:1348834-1384963:1
so has part: feature:1348834-1349013:1:exon
so has part: feature:1365372-1365438:1:exon
so has part: feature:1366175-1366260:1:exon
so has part: feature:1368947-1369169:1:exon
so has part: feature:1370554-1370724:1:exon
so has part: feature:1371241-1371479:1:exon
so has part: feature:1373225-1373380:1:exon
so has part: feature:1374117-1374212:1:exon
so has part: feature:1374519-1374608:1:exon
so has part: feature:1376020-1376160:1:exon
so has part: feature:1376324-1376523:1:exon
so has part: feature:1377804-1378042:1:exon
so has part: feature:1378323-1378545:1:exon
so has part: feature:1379162-1379394:1:exon
so has part: feature:1380721-1380887:1:exon
so has part: feature:1381793-1384963:1:exon

position:1384963:1
position: 1384963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348834-1349013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1365372-1365438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366175-1366260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1368947-1369169:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1370554-1370724:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1371241-1371479:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1373225-1373380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1374117-1374212:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1374519-1374608:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376020-1376160:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1376324-1376523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1377804-1378042:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1378323-1378545:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1379162-1379394:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1380721-1380887:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1381793-1384963:1:exon

position:1381793:1
position: 1381793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ITGB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ITGB1
product: integrin subunit beta 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_031444516.1
SIO_010081: ITGB1
subclass of: SO_0000673
so part of: ITGB1
location: join(1348834..1349013,1365372..1365438,1366175..1366260,1368947..1369169,1370554..1370724,1371241..1371479,1373225..1373380,1374117..1374212,1374519..1374608,1376020..1376160,1376324..1376523,1377804..1378042,1378323..1378545,1379162..1379394,1380721..1380887,1381793..1381904,1383175..1384963)
location: region:1348834-1384963:1
so has part: feature:1348834-1349013:1:exon
so has part: feature:1365372-1365438:1:exon
so has part: feature:1366175-1366260:1:exon
so has part: feature:1368947-1369169:1:exon
so has part: feature:1370554-1370724:1:exon
so has part: feature:1371241-1371479:1:exon
so has part: feature:1373225-1373380:1:exon
so has part: feature:1374117-1374212:1:exon
so has part: feature:1374519-1374608:1:exon
so has part: feature:1376020-1376160:1:exon
so has part: feature:1376324-1376523:1:exon
so has part: feature:1377804-1378042:1:exon
so has part: feature:1378323-1378545:1:exon
so has part: feature:1379162-1379394:1:exon
so has part: feature:1380721-1380887:1:exon
so has part: feature:1381793-1381904:1:exon
so has part: feature:1383175-1384963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1348834-1349013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1365372-1365438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366175-1366260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1368947-1369169:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1370554-1370724:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1371241-1371479:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1373225-1373380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1374117-1374212:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1374519-1374608:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376020-1376160:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1376324-1376523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1377804-1378042:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1378323-1378545:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1379162-1379394:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1380721-1380887:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1381793-1381904:1:exon

position:1381904:1
position: 1381904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1383175-1384963:1:exon

position:1383175:1
position: 1383175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ITGB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ITGB1
product: integrin subunit beta 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031444517.1
SIO_010081: ITGB1
subclass of: SO_0000673
so part of: ITGB1
location: join(1348834..1349013,1365372..1365438,1366175..1366260,1368947..1369169,1370554..1370724,1371241..1371479,1373225..1373380,1374117..1374212,1374519..1374608,1376020..1376160,1376324..1376523,1377804..1378042,1378323..1378545,1379162..1379394,1380721..1380887,1381793..1381877,1383175..1384963)
location: region:1348834-1384963:1
so has part: feature:1348834-1349013:1:exon
so has part: feature:1365372-1365438:1:exon
so has part: feature:1366175-1366260:1:exon
so has part: feature:1368947-1369169:1:exon
so has part: feature:1370554-1370724:1:exon
so has part: feature:1371241-1371479:1:exon
so has part: feature:1373225-1373380:1:exon
so has part: feature:1374117-1374212:1:exon
so has part: feature:1374519-1374608:1:exon
so has part: feature:1376020-1376160:1:exon
so has part: feature:1376324-1376523:1:exon
so has part: feature:1377804-1378042:1:exon
so has part: feature:1378323-1378545:1:exon
so has part: feature:1379162-1379394:1:exon
so has part: feature:1380721-1380887:1:exon
so has part: feature:1381793-1381877:1:exon
so has part: feature:1383175-1384963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1348834-1349013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1365372-1365438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366175-1366260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1368947-1369169:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1370554-1370724:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1371241-1371479:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1373225-1373380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1374117-1374212:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1374519-1374608:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376020-1376160:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1376324-1376523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1377804-1378042:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1378323-1378545:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1379162-1379394:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1380721-1380887:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1381793-1381877:1:exon

position:1381877:1
position: 1381877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1383175-1384963:1:exon

ITGB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ITGB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin beta-1 isoform X2
translation: MNLQLIFCIGLISSVCLVFGQADENRCLKANAKSCGECIQAGPNCGWCTNATFLQEGMPTSARCDDLEALKKKGCHPDDIENPRGSKDIKKNKNVTNRSKGTAEKLQPEDITQIQPQQLVLQLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNKMKRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTDKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENDVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENSKLPEGVTINYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPNKDSETIKIKPLGFTEEVEIILEFICECECQSEGIPSSPRCHDGNGTFECGACRCNEGRVGRQCECSTDEVNSEDMDAHCRKENSSEICSNNGECVCGQCVCRKRDNTNEVYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSSCLAVNGQICNGRGVCECGACRCTDPKFQGPTCEMCQTCLGVCAEHKECVQCRAFDKGEKKDTCAQECSHFNVTKVESRDRLPQPGQVDPLSHCKEKDVDDCWFYFTYSVNGNNEATVHVVETPECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEGK
SIO_010081: ITGB1
subclass of: SO_0000673
so part of: ITGB1
location: join(1365372..1365438,1366175..1366260,1368947..1369169,1370554..1370724,1371241..1371479,1373225..1373380,1374117..1374212,1374519..1374608,1376020..1376160,1376324..1376523,1377804..1378042,1378323..1378545,1379162..1379394,1380721..1380887,1386499..1386564)
location: region:1365372-1386564:1
so has part: feature:1365372-1365438:1:exon
so has part: feature:1366175-1366260:1:exon
so has part: feature:1368947-1369169:1:exon
so has part: feature:1370554-1370724:1:exon
so has part: feature:1371241-1371479:1:exon
so has part: feature:1373225-1373380:1:exon
so has part: feature:1374117-1374212:1:exon
so has part: feature:1374519-1374608:1:exon
so has part: feature:1376020-1376160:1:exon
so has part: feature:1376324-1376523:1:exon
so has part: feature:1377804-1378042:1:exon
so has part: feature:1378323-1378545:1:exon
so has part: feature:1379162-1379394:1:exon
so has part: feature:1380721-1380887:1:exon
so has part: feature:1386499-1386564:1:exon

XP_031300378.1
type: Protein
SIO_000068: ncbiprotein

position:1386564:1
position: 1386564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365372-1365438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1366175-1366260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368947-1369169:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370554-1370724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1371241-1371479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373225-1373380:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1374117-1374212:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1374519-1374608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1376020-1376160:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376324-1376523:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1377804-1378042:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1378323-1378545:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1379162-1379394:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1380721-1380887:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1386499-1386564:1:exon

ITGB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ITGB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin beta-1 isoform X1
translation: MNLQLIFCIGLISSVCLVFGQADENRCLKANAKSCGECIQAGPNCGWCTNATFLQEGMPTSARCDDLEALKKKGCHPDDIENPRGSKDIKKNKNVTNRSKGTAEKLQPEDITQIQPQQLVLQLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNKMKRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTDKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENDVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENSKLPEGVTINYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPNKDSETIKIKPLGFTEEVEIILEFICECECQSEGIPSSPRCHDGNGTFECGACRCNEGRVGRQCECSTDEVNSEDMDAHCRKENSSEICSNNGECVCGQCVCRKRDNTNEVYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSSCLAVNGQICNGRGVCECGACRCTDPKFQGPTCEMCQTCLGVCAEHKECVQCRAFDKGEKKDTCAQECSHFNVTKVESRDRLPQPGQVDPLSHCKEKDVDDCWFYFTYSVNGNNEATVHVVETPECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQENPIYKSPINNFKNPNYGRKAGL
SIO_010081: ITGB1
subclass of: SO_0000673
so part of: ITGB1
location: join(1365372..1365438,1366175..1366260,1368947..1369169,1370554..1370724,1371241..1371479,1373225..1373380,1374117..1374212,1374519..1374608,1376020..1376160,1376324..1376523,1377804..1378042,1378323..1378545,1379162..1379394,1380721..1380887,1381793..1381867)
location: region:1365372-1381867:1
so has part: feature:1365372-1365438:1:exon
so has part: feature:1366175-1366260:1:exon
so has part: feature:1368947-1369169:1:exon
so has part: feature:1370554-1370724:1:exon
so has part: feature:1371241-1371479:1:exon
so has part: feature:1373225-1373380:1:exon
so has part: feature:1374117-1374212:1:exon
so has part: feature:1374519-1374608:1:exon
so has part: feature:1376020-1376160:1:exon
so has part: feature:1376324-1376523:1:exon
so has part: feature:1377804-1378042:1:exon
so has part: feature:1378323-1378545:1:exon
so has part: feature:1379162-1379394:1:exon
so has part: feature:1380721-1380887:1:exon
so has part: feature:1381793-1381867:1:exon

XP_031300375.1
type: Protein
SIO_000068: ncbiprotein

position:1381867:1
position: 1381867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365372-1365438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1366175-1366260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368947-1369169:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370554-1370724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1371241-1371479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373225-1373380:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1374117-1374212:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1374519-1374608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1376020-1376160:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376324-1376523:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1377804-1378042:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1378323-1378545:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1379162-1379394:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1380721-1380887:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1381793-1381867:1:exon

ITGB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ITGB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin beta-1 isoform X1
translation: MNLQLIFCIGLISSVCLVFGQADENRCLKANAKSCGECIQAGPNCGWCTNATFLQEGMPTSARCDDLEALKKKGCHPDDIENPRGSKDIKKNKNVTNRSKGTAEKLQPEDITQIQPQQLVLQLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNKMKRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTDKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENDVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENSKLPEGVTINYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPNKDSETIKIKPLGFTEEVEIILEFICECECQSEGIPSSPRCHDGNGTFECGACRCNEGRVGRQCECSTDEVNSEDMDAHCRKENSSEICSNNGECVCGQCVCRKRDNTNEVYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSSCLAVNGQICNGRGVCECGACRCTDPKFQGPTCEMCQTCLGVCAEHKECVQCRAFDKGEKKDTCAQECSHFNVTKVESRDRLPQPGQVDPLSHCKEKDVDDCWFYFTYSVNGNNEATVHVVETPECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQENPIYKSPINNFKNPNYGRKAGL
SIO_010081: ITGB1
subclass of: SO_0000673
so part of: ITGB1
location: join(1365372..1365438,1366175..1366260,1368947..1369169,1370554..1370724,1371241..1371479,1373225..1373380,1374117..1374212,1374519..1374608,1376020..1376160,1376324..1376523,1377804..1378042,1378323..1378545,1379162..1379394,1380721..1380887,1381793..1381867)
location: region:1365372-1381867:1
so has part: feature:1365372-1365438:1:exon
so has part: feature:1366175-1366260:1:exon
so has part: feature:1368947-1369169:1:exon
so has part: feature:1370554-1370724:1:exon
so has part: feature:1371241-1371479:1:exon
so has part: feature:1373225-1373380:1:exon
so has part: feature:1374117-1374212:1:exon
so has part: feature:1374519-1374608:1:exon
so has part: feature:1376020-1376160:1:exon
so has part: feature:1376324-1376523:1:exon
so has part: feature:1377804-1378042:1:exon
so has part: feature:1378323-1378545:1:exon
so has part: feature:1379162-1379394:1:exon
so has part: feature:1380721-1380887:1:exon
so has part: feature:1381793-1381867:1:exon

XP_031300376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1365372-1365438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1366175-1366260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368947-1369169:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370554-1370724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1371241-1371479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373225-1373380:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1374117-1374212:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1374519-1374608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1376020-1376160:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376324-1376523:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1377804-1378042:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1378323-1378545:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1379162-1379394:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1380721-1380887:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1381793-1381867:1:exon

ITGB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ITGB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin beta-1 isoform X1
translation: MNLQLIFCIGLISSVCLVFGQADENRCLKANAKSCGECIQAGPNCGWCTNATFLQEGMPTSARCDDLEALKKKGCHPDDIENPRGSKDIKKNKNVTNRSKGTAEKLQPEDITQIQPQQLVLQLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNKMKRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTDKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENDVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENSKLPEGVTINYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPNKDSETIKIKPLGFTEEVEIILEFICECECQSEGIPSSPRCHDGNGTFECGACRCNEGRVGRQCECSTDEVNSEDMDAHCRKENSSEICSNNGECVCGQCVCRKRDNTNEVYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSSCLAVNGQICNGRGVCECGACRCTDPKFQGPTCEMCQTCLGVCAEHKECVQCRAFDKGEKKDTCAQECSHFNVTKVESRDRLPQPGQVDPLSHCKEKDVDDCWFYFTYSVNGNNEATVHVVETPECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQENPIYKSPINNFKNPNYGRKAGL
SIO_010081: ITGB1
subclass of: SO_0000673
so part of: ITGB1
location: join(1365372..1365438,1366175..1366260,1368947..1369169,1370554..1370724,1371241..1371479,1373225..1373380,1374117..1374212,1374519..1374608,1376020..1376160,1376324..1376523,1377804..1378042,1378323..1378545,1379162..1379394,1380721..1380887,1381793..1381867)
location: region:1365372-1381867:1
so has part: feature:1365372-1365438:1:exon
so has part: feature:1366175-1366260:1:exon
so has part: feature:1368947-1369169:1:exon
so has part: feature:1370554-1370724:1:exon
so has part: feature:1371241-1371479:1:exon
so has part: feature:1373225-1373380:1:exon
so has part: feature:1374117-1374212:1:exon
so has part: feature:1374519-1374608:1:exon
so has part: feature:1376020-1376160:1:exon
so has part: feature:1376324-1376523:1:exon
so has part: feature:1377804-1378042:1:exon
so has part: feature:1378323-1378545:1:exon
so has part: feature:1379162-1379394:1:exon
so has part: feature:1380721-1380887:1:exon
so has part: feature:1381793-1381867:1:exon

XP_031300377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1365372-1365438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1366175-1366260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368947-1369169:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370554-1370724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1371241-1371479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373225-1373380:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1374117-1374212:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1374519-1374608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1376020-1376160:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376324-1376523:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1377804-1378042:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1378323-1378545:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1379162-1379394:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1380721-1380887:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1381793-1381867:1:exon

OPTN
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: OPTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1407858..1441977
location: region:1407858-1441977:1
so has part: feature:1407858-1441977:1:exon
subclass of: SO_0000010

105100651
type: Gene
SIO_000068: ncbigene

position:1407858:1
position: 1407858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441977:1
position: 1441977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1407858-1441977:1:exon

OPTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: OPTN
product: optineurin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_010993689.2
SIO_010081: OPTN
subclass of: SO_0000673
so part of: OPTN
location: join(1407858..1407891,1408570..1408746,1409401..1409603,1415073..1415255,1417503..1417576,1419379..1419513,1425778..1425880,1427053..1427168,1428527..1428676,1429042..1429135,1430185..1430343,1435130..1435260,1436328..1436410,1440275..1441977)
location: region:1407858-1441977:1
so has part: feature:1407858-1407891:1:exon
so has part: feature:1408570-1408746:1:exon
so has part: feature:1409401-1409603:1:exon
so has part: feature:1415073-1415255:1:exon
so has part: feature:1417503-1417576:1:exon
so has part: feature:1419379-1419513:1:exon
so has part: feature:1425778-1425880:1:exon
so has part: feature:1427053-1427168:1:exon
so has part: feature:1428527-1428676:1:exon
so has part: feature:1429042-1429135:1:exon
so has part: feature:1430185-1430343:1:exon
so has part: feature:1435130-1435260:1:exon
so has part: feature:1436328-1436410:1:exon
so has part: feature:1440275-1441977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1407858-1407891:1:exon

position:1407891:1
position: 1407891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1408570-1408746:1:exon

position:1408570:1
position: 1408570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408746:1
position: 1408746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1409401-1409603:1:exon

position:1409401:1
position: 1409401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1409603:1
position: 1409603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1415073-1415255:1:exon

position:1415073:1
position: 1415073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1415255:1
position: 1415255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1417503-1417576:1:exon

position:1417503:1
position: 1417503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1417576:1
position: 1417576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1419379-1419513:1:exon

position:1419379:1
position: 1419379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419513:1
position: 1419513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1425778-1425880:1:exon

position:1425778:1
position: 1425778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425880:1
position: 1425880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1427053-1427168:1:exon

position:1427053:1
position: 1427053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427168:1
position: 1427168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1428527-1428676:1:exon

position:1428527:1
position: 1428527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428676:1
position: 1428676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1429042-1429135:1:exon

position:1429042:1
position: 1429042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429135:1
position: 1429135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1430185-1430343:1:exon

position:1430185:1
position: 1430185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430343:1
position: 1430343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1435130-1435260:1:exon

position:1435130:1
position: 1435130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1435260:1
position: 1435260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1436328-1436410:1:exon

position:1436328:1
position: 1436328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436410:1
position: 1436410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1440275-1441977:1:exon

position:1440275:1
position: 1440275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OPTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: OPTN
product: optineurin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_010993688.2
SIO_010081: OPTN
subclass of: SO_0000673
so part of: OPTN
location: join(1407860..1407891,1408570..1408746,1409401..1409603,1415073..1415255,1417503..1417576,1419379..1419513,1425778..1425880,1427053..1427168,1428527..1428676,1429042..1429135,1430185..1430343,1435130..1435260,1436325..1436410,1440275..1441977)
location: region:1407860-1441977:1
so has part: feature:1407860-1407891:1:exon
so has part: feature:1408570-1408746:1:exon
so has part: feature:1409401-1409603:1:exon
so has part: feature:1415073-1415255:1:exon
so has part: feature:1417503-1417576:1:exon
so has part: feature:1419379-1419513:1:exon
so has part: feature:1425778-1425880:1:exon
so has part: feature:1427053-1427168:1:exon
so has part: feature:1428527-1428676:1:exon
so has part: feature:1429042-1429135:1:exon
so has part: feature:1430185-1430343:1:exon
so has part: feature:1435130-1435260:1:exon
so has part: feature:1436325-1436410:1:exon
so has part: feature:1440275-1441977:1:exon

position:1407860:1
position: 1407860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1407860-1407891:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1408570-1408746:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1409401-1409603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1415073-1415255:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417503-1417576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1419379-1419513:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1425778-1425880:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1427053-1427168:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1428527-1428676:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1429042-1429135:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1430185-1430343:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1435130-1435260:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1436325-1436410:1:exon

position:1436325:1
position: 1436325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1440275-1441977:1:exon

OPTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: OPTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: optineurin isoform X1
translation: MSHQPLSWLTEKGDSPNKTTGNGPPNLAHPNLDTFTPHELLQQMRELLIENHQLKEAMKLNNQAMKGRFEELSAWTEKQKEKRLFFETQSKEAKEHLTALSRENEKLKQELGKLKEKTERSFQDLSGDPRVPRAEAEQEAEQLKAQVTRLQAEKADLLGIVSELQLKLSSGGPSEDSFVEIGMAEGEADVATKEIKTTPRPTRTDSTDTSRSAEGTRNYLEFEELTVSQLLLGLREGNQKVERLEIALKEAKERISDFEKKVKDRSEIETQTEGRAEQEKEEEKGTETVGSEVETLSLQVTTLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSATPSELNEKQELVYNNKKLELQVESMRSEIKMEQAKTEDEKVKLATLQLTHNRLLLEYNNALKTIEELKRRESEKVDKVVLQELNGKLELAEKALASKQLQMDEMKQTIAKQEKDLETMAVLRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKESDAFEDGGGRQSLMEMQNRHGARASDADQQQAYLVQREAEDRNWLQEQQRNIPIHSCPKCGEVLPDIDTLLIHVTDCII
SIO_010081: OPTN
subclass of: SO_0000673
so part of: OPTN
location: join(1408581..1408746,1409401..1409603,1415073..1415255,1417503..1417576,1419379..1419513,1425778..1425880,1427053..1427168,1428527..1428676,1429042..1429135,1430185..1430343,1435130..1435260,1436325..1436410,1440275..1440402)
location: region:1408581-1440402:1
so has part: feature:1408581-1408746:1:exon
so has part: feature:1409401-1409603:1:exon
so has part: feature:1415073-1415255:1:exon
so has part: feature:1417503-1417576:1:exon
so has part: feature:1419379-1419513:1:exon
so has part: feature:1425778-1425880:1:exon
so has part: feature:1427053-1427168:1:exon
so has part: feature:1428527-1428676:1:exon
so has part: feature:1429042-1429135:1:exon
so has part: feature:1430185-1430343:1:exon
so has part: feature:1435130-1435260:1:exon
so has part: feature:1436325-1436410:1:exon
so has part: feature:1440275-1440402:1:exon

XP_010991990.1
type: Protein
SIO_000068: ncbiprotein

position:1408581:1
position: 1408581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1440402:1
position: 1440402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1408581-1408746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1409401-1409603:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415073-1415255:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1417503-1417576:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1419379-1419513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1425778-1425880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427053-1427168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1428527-1428676:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1429042-1429135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1430185-1430343:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1435130-1435260:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1436325-1436410:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1440275-1440402:1:exon

OPTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: OPTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: optineurin isoform X2
translation: MSHQPLSWLTEKGDSPNKTTGNGPPNLAHPNLDTFTPHELLQQMRELLIENHQLKEAMKLNNQAMKGRFEELSAWTEKQKEKRLFFETQSKEAKEHLTALSRENEKLKQELGKLKEKTERSFQDLSGDPRVPRAEAEQEAEQLKAQVTRLQAEKADLLGIVSELQLKLSSGGPSEDSFVEIGMAEGEADVATKEIKTTPRPTRTDSTDTSRSAEGTRNYLEFEELTVSQLLLGLREGNQKVERLEIALKEAKERISDFEKKVKDRSEIETQTEGRAEQEKEEEKGTETVGSEVETLSLQVTTLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSATPSELNEKQELVYNNKKLELQVESMRSEIKMEQAKTEDEKVKLATLQLTHNRLLLEYNNALKTIEELKRRESEKVDKVVLQELNGKLELAEKALASKQLQMDEMKQTIAKQEKDLETMAVLRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKESDAFEDGGGQSLMEMQNRHGARASDADQQQAYLVQREAEDRNWLQEQQRNIPIHSCPKCGEVLPDIDTLLIHVTDCII
SIO_010081: OPTN
subclass of: SO_0000673
so part of: OPTN
location: join(1408581..1408746,1409401..1409603,1415073..1415255,1417503..1417576,1419379..1419513,1425778..1425880,1427053..1427168,1428527..1428676,1429042..1429135,1430185..1430343,1435130..1435260,1436328..1436410,1440275..1440402)
location: region:1408581-1440402:1
so has part: feature:1408581-1408746:1:exon
so has part: feature:1409401-1409603:1:exon
so has part: feature:1415073-1415255:1:exon
so has part: feature:1417503-1417576:1:exon
so has part: feature:1419379-1419513:1:exon
so has part: feature:1425778-1425880:1:exon
so has part: feature:1427053-1427168:1:exon
so has part: feature:1428527-1428676:1:exon
so has part: feature:1429042-1429135:1:exon
so has part: feature:1430185-1430343:1:exon
so has part: feature:1435130-1435260:1:exon
so has part: feature:1436328-1436410:1:exon
so has part: feature:1440275-1440402:1:exon

XP_010991991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1408581-1408746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1409401-1409603:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415073-1415255:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1417503-1417576:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1419379-1419513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1425778-1425880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427053-1427168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1428527-1428676:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1429042-1429135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1430185-1430343:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1435130-1435260:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1436328-1436410:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1440275-1440402:1:exon

MCM10
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: MCM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1450607..1548923
location: region:1450607-1548923:1
so has part: feature:1450607-1548923:1:exon
subclass of: SO_0000010

105100653
type: Gene
SIO_000068: ncbigene

position:1450607:1
position: 1450607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1548923:1
position: 1548923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1450607-1548923:1:exon

MCM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MCM10
product: minichromosome maintenance 10 replication initiation factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031444520.1
SIO_010081: MCM10
subclass of: SO_0000673
so part of: MCM10
location: join(1450607..1450666,1452574..1452659,1454845..1455183,1455988..1456092,1456225..1456365,1457907..1458078,1459931..1460096,1461608..1461775,1462949..1463065,1465776..1465975,1467353..1467453,1468089..1468199,1468287..1468404,1469887..1470115,1471213..1471357,1472115..1472233,1474122..1474235,1476784..1476929,1480420..1480462,1480549..1480648,1548487..1548923)
location: region:1450607-1548923:1
so has part: feature:1450607-1450666:1:exon
so has part: feature:1452574-1452659:1:exon
so has part: feature:1454845-1455183:1:exon
so has part: feature:1455988-1456092:1:exon
so has part: feature:1456225-1456365:1:exon
so has part: feature:1457907-1458078:1:exon
so has part: feature:1459931-1460096:1:exon
so has part: feature:1461608-1461775:1:exon
so has part: feature:1462949-1463065:1:exon
so has part: feature:1465776-1465975:1:exon
so has part: feature:1467353-1467453:1:exon
so has part: feature:1468089-1468199:1:exon
so has part: feature:1468287-1468404:1:exon
so has part: feature:1469887-1470115:1:exon
so has part: feature:1471213-1471357:1:exon
so has part: feature:1472115-1472233:1:exon
so has part: feature:1474122-1474235:1:exon
so has part: feature:1476784-1476929:1:exon
so has part: feature:1480420-1480462:1:exon
so has part: feature:1480549-1480648:1:exon
so has part: feature:1548487-1548923:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1450607-1450666:1:exon

position:1450666:1
position: 1450666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1452574-1452659:1:exon

position:1452574:1
position: 1452574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452659:1
position: 1452659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1454845-1455183:1:exon

position:1454845:1
position: 1454845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1455183:1
position: 1455183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1455988-1456092:1:exon

position:1455988:1
position: 1455988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456092:1
position: 1456092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1456225-1456365:1:exon

position:1456225:1
position: 1456225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456365:1
position: 1456365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1457907-1458078:1:exon

position:1457907:1
position: 1457907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1458078:1
position: 1458078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1459931-1460096:1:exon

position:1459931:1
position: 1459931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1460096:1
position: 1460096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1461608-1461775:1:exon

position:1461608:1
position: 1461608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1461775:1
position: 1461775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1462949-1463065:1:exon

position:1462949:1
position: 1462949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463065:1
position: 1463065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1465776-1465975:1:exon

position:1465776:1
position: 1465776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465975:1
position: 1465975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1467353-1467453:1:exon

position:1467353:1
position: 1467353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467453:1
position: 1467453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1468089-1468199:1:exon

position:1468089:1
position: 1468089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1468199:1
position: 1468199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1468287-1468404:1:exon

position:1468287:1
position: 1468287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1468404:1
position: 1468404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1469887-1470115:1:exon

position:1469887:1
position: 1469887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470115:1
position: 1470115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1471213-1471357:1:exon

position:1471213:1
position: 1471213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471357:1
position: 1471357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1472115-1472233:1:exon

position:1472115:1
position: 1472115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472233:1
position: 1472233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1474122-1474235:1:exon

position:1474122:1
position: 1474122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474235:1
position: 1474235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1476784-1476929:1:exon

position:1476784:1
position: 1476784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1476929:1
position: 1476929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1480420-1480462:1:exon

position:1480420:1
position: 1480420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480462:1
position: 1480462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1480549-1480648:1:exon

position:1480549:1
position: 1480549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480648:1
position: 1480648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1548487-1548923:1:exon

position:1548487:1
position: 1548487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MCM10
product: minichromosome maintenance 10 replication initiation factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031444521.1
SIO_010081: MCM10
subclass of: SO_0000673
so part of: MCM10
location: join(1450607..1450666,1452574..1452659,1454845..1455183,1455988..1456092,1456225..1456365,1457907..1458078,1459931..1460096,1461608..1461775,1462949..1463065,1465776..1465975,1467353..1467453,1468089..1468199,1468287..1468404,1469887..1470115,1471213..1471357,1472115..1472233,1474122..1474235,1476784..1476929,1480420..1480462,1480549..1480648,1484698..1486417)
location: region:1450607-1486417:1
so has part: feature:1450607-1450666:1:exon
so has part: feature:1452574-1452659:1:exon
so has part: feature:1454845-1455183:1:exon
so has part: feature:1455988-1456092:1:exon
so has part: feature:1456225-1456365:1:exon
so has part: feature:1457907-1458078:1:exon
so has part: feature:1459931-1460096:1:exon
so has part: feature:1461608-1461775:1:exon
so has part: feature:1462949-1463065:1:exon
so has part: feature:1465776-1465975:1:exon
so has part: feature:1467353-1467453:1:exon
so has part: feature:1468089-1468199:1:exon
so has part: feature:1468287-1468404:1:exon
so has part: feature:1469887-1470115:1:exon
so has part: feature:1471213-1471357:1:exon
so has part: feature:1472115-1472233:1:exon
so has part: feature:1474122-1474235:1:exon
so has part: feature:1476784-1476929:1:exon
so has part: feature:1480420-1480462:1:exon
so has part: feature:1480549-1480648:1:exon
so has part: feature:1484698-1486417:1:exon

position:1486417:1
position: 1486417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1450607-1450666:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452574-1452659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1454845-1455183:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1455988-1456092:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1456225-1456365:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1457907-1458078:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1459931-1460096:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1461608-1461775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1462949-1463065:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1465776-1465975:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1467353-1467453:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468089-1468199:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1468287-1468404:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1469887-1470115:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1471213-1471357:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1472115-1472233:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1474122-1474235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1476784-1476929:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1480420-1480462:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1480549-1480648:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1484698-1486417:1:exon

position:1484698:1
position: 1484698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MCM10
product: minichromosome maintenance 10 replication initiation factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031444519.1
SIO_010081: MCM10
subclass of: SO_0000673
so part of: MCM10
location: join(1450607..1450666,1452574..1452659,1454845..1455183,1455988..1456092,1456225..1456365,1457907..1458078,1459931..1460096,1461608..1461775,1462949..1463065,1465776..1465975,1467353..1467453,1468089..1468199,1468287..1468404,1469887..1470115,1471213..1471357,1472115..1472233,1474122..1474235,1476784..1476929,1480420..1480462,1480549..1483908)
location: region:1450607-1483908:1
so has part: feature:1450607-1450666:1:exon
so has part: feature:1452574-1452659:1:exon
so has part: feature:1454845-1455183:1:exon
so has part: feature:1455988-1456092:1:exon
so has part: feature:1456225-1456365:1:exon
so has part: feature:1457907-1458078:1:exon
so has part: feature:1459931-1460096:1:exon
so has part: feature:1461608-1461775:1:exon
so has part: feature:1462949-1463065:1:exon
so has part: feature:1465776-1465975:1:exon
so has part: feature:1467353-1467453:1:exon
so has part: feature:1468089-1468199:1:exon
so has part: feature:1468287-1468404:1:exon
so has part: feature:1469887-1470115:1:exon
so has part: feature:1471213-1471357:1:exon
so has part: feature:1472115-1472233:1:exon
so has part: feature:1474122-1474235:1:exon
so has part: feature:1476784-1476929:1:exon
so has part: feature:1480420-1480462:1:exon
so has part: feature:1480549-1483908:1:exon

position:1483908:1
position: 1483908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1450607-1450666:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452574-1452659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1454845-1455183:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1455988-1456092:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1456225-1456365:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1457907-1458078:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1459931-1460096:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1461608-1461775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1462949-1463065:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1465776-1465975:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1467353-1467453:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468089-1468199:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1468287-1468404:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1469887-1470115:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1471213-1471357:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1472115-1472233:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1474122-1474235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1476784-1476929:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1480420-1480462:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1480549-1483908:1:exon

MCM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MCM10
product: minichromosome maintenance 10 replication initiation factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010993691.2
SIO_010081: MCM10
subclass of: SO_0000673
so part of: MCM10
location: join(1450607..1450666,1452574..1452659,1454845..1455183,1455988..1456092,1456228..1456365,1457907..1458078,1459931..1460096,1461608..1461775,1462949..1463065,1465776..1465975,1467353..1467453,1468089..1468199,1468287..1468404,1469887..1470115,1471213..1471357,1472115..1472233,1474122..1474235,1476784..1476929,1480420..1480462,1480549..1483908)
location: region:1450607-1483908:1
so has part: feature:1450607-1450666:1:exon
so has part: feature:1452574-1452659:1:exon
so has part: feature:1454845-1455183:1:exon
so has part: feature:1455988-1456092:1:exon
so has part: feature:1456228-1456365:1:exon
so has part: feature:1457907-1458078:1:exon
so has part: feature:1459931-1460096:1:exon
so has part: feature:1461608-1461775:1:exon
so has part: feature:1462949-1463065:1:exon
so has part: feature:1465776-1465975:1:exon
so has part: feature:1467353-1467453:1:exon
so has part: feature:1468089-1468199:1:exon
so has part: feature:1468287-1468404:1:exon
so has part: feature:1469887-1470115:1:exon
so has part: feature:1471213-1471357:1:exon
so has part: feature:1472115-1472233:1:exon
so has part: feature:1474122-1474235:1:exon
so has part: feature:1476784-1476929:1:exon
so has part: feature:1480420-1480462:1:exon
so has part: feature:1480549-1483908:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1450607-1450666:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452574-1452659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1454845-1455183:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1455988-1456092:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1456228-1456365:1:exon

position:1456228:1
position: 1456228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1457907-1458078:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1459931-1460096:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1461608-1461775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1462949-1463065:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1465776-1465975:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1467353-1467453:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468089-1468199:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1468287-1468404:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1469887-1470115:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1471213-1471357:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1472115-1472233:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1474122-1474235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1476784-1476929:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1480420-1480462:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1480549-1483908:1:exon

MCM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MCM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MCM10 homolog isoform X1
translation: MDGEEDDLSLLTALLEENELALDCNSQESQPLTQDVGEPDSFDELFDTDGDGESYTEEANDEAEKPEDQKENLAALFGDTEDLTDEEEVPMLQSAEKRVLPAPAPRQGKTNQELQDELKKLQEQMKSLQEQLKLTTIKPPASPALLRKSPVDKAPRPPLKEKKVQRIQESACLSAELDVLAAPNPRQVARAPKLSPAEPKSSSSKLTSVPSQPLRTTPGNKPSGMTRDQSAGTPRTSVEMAQTVSVEAFSGLRLRKPRVSSTEMNKKMTGRKLIRLSQLKEKMAREKLEEIDWVTFGVILKKITPQSSNSGKTFSIWRLNDLRDLTQYVSLFLFGEVHKQLWKTEQGTVVGLLNANPMKPKDGSEEVCLSIDHPQKILIMGEALDLGTCKAKKKNGEPCTQTVNLNDCEYCQYHIQAQYKKLSARRADLQSTFSGGRIPKKFARKGISLKERLCQDGFYYGGVSSASYAASIAAAVAPKKKIQTTLTNLVVKGTDLILQETRQKLGIPQKSLSCSEEFRELMDLPTCGARNLKHHLAKATPSGTMGSLKPAFQSISASALLKQQKQRMLEMRKKKSEDIQKRFLQSSSEVKNLAAPSSSLQPPLQSPPVGAEFPRMEGAPATQTPKLARGISEGDDVLFFDESPPPRPKLSALAEAKKLAAITKLRAKGQMLQKTDPNSIKKKLKKPQDVLEVKERAETSSILSPQDEGGLEPARKKRREQLAYLESEEFQTILKAKSRHTGILKEAEAELQEQYFEPLVKKEQMEEKMRSIREVKCRVVTCKTCAYTHFKPLETCVSEQHNYHWHDGVKRFFKCPCGNRSISLDRLPQKHCSNCGLFKWERDGMLKEKTGPKIGGETLLPRGEEYAKFLNSLK
SIO_010081: MCM10
subclass of: SO_0000673
so part of: MCM10
location: join(1452653..1452659,1454845..1455183,1455988..1456092,1456225..1456365,1457907..1458078,1459931..1460096,1461608..1461775,1462949..1463065,1465776..1465975,1467353..1467453,1468089..1468199,1468287..1468404,1469887..1470115,1471213..1471357,1472115..1472233,1474122..1474235,1476784..1476929,1480420..1480462,1480549..1480632)
location: region:1452653-1480632:1
so has part: feature:1452653-1452659:1:exon
so has part: feature:1454845-1455183:1:exon
so has part: feature:1455988-1456092:1:exon
so has part: feature:1456225-1456365:1:exon
so has part: feature:1457907-1458078:1:exon
so has part: feature:1459931-1460096:1:exon
so has part: feature:1461608-1461775:1:exon
so has part: feature:1462949-1463065:1:exon
so has part: feature:1465776-1465975:1:exon
so has part: feature:1467353-1467453:1:exon
so has part: feature:1468089-1468199:1:exon
so has part: feature:1468287-1468404:1:exon
so has part: feature:1469887-1470115:1:exon
so has part: feature:1471213-1471357:1:exon
so has part: feature:1472115-1472233:1:exon
so has part: feature:1474122-1474235:1:exon
so has part: feature:1476784-1476929:1:exon
so has part: feature:1480420-1480462:1:exon
so has part: feature:1480549-1480632:1:exon

XP_031300379.1
type: Protein
SIO_000068: ncbiprotein

position:1452653:1
position: 1452653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480632:1
position: 1480632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452653-1452659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1454845-1455183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1455988-1456092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1456225-1456365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1457907-1458078:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1459931-1460096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1461608-1461775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1462949-1463065:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1465776-1465975:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1467353-1467453:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1468089-1468199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468287-1468404:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1469887-1470115:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1471213-1471357:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1472115-1472233:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1474122-1474235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1476784-1476929:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1480420-1480462:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1480549-1480632:1:exon

MCM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MCM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MCM10 homolog isoform X1
translation: MDGEEDDLSLLTALLEENELALDCNSQESQPLTQDVGEPDSFDELFDTDGDGESYTEEANDEAEKPEDQKENLAALFGDTEDLTDEEEVPMLQSAEKRVLPAPAPRQGKTNQELQDELKKLQEQMKSLQEQLKLTTIKPPASPALLRKSPVDKAPRPPLKEKKVQRIQESACLSAELDVLAAPNPRQVARAPKLSPAEPKSSSSKLTSVPSQPLRTTPGNKPSGMTRDQSAGTPRTSVEMAQTVSVEAFSGLRLRKPRVSSTEMNKKMTGRKLIRLSQLKEKMAREKLEEIDWVTFGVILKKITPQSSNSGKTFSIWRLNDLRDLTQYVSLFLFGEVHKQLWKTEQGTVVGLLNANPMKPKDGSEEVCLSIDHPQKILIMGEALDLGTCKAKKKNGEPCTQTVNLNDCEYCQYHIQAQYKKLSARRADLQSTFSGGRIPKKFARKGISLKERLCQDGFYYGGVSSASYAASIAAAVAPKKKIQTTLTNLVVKGTDLILQETRQKLGIPQKSLSCSEEFRELMDLPTCGARNLKHHLAKATPSGTMGSLKPAFQSISASALLKQQKQRMLEMRKKKSEDIQKRFLQSSSEVKNLAAPSSSLQPPLQSPPVGAEFPRMEGAPATQTPKLARGISEGDDVLFFDESPPPRPKLSALAEAKKLAAITKLRAKGQMLQKTDPNSIKKKLKKPQDVLEVKERAETSSILSPQDEGGLEPARKKRREQLAYLESEEFQTILKAKSRHTGILKEAEAELQEQYFEPLVKKEQMEEKMRSIREVKCRVVTCKTCAYTHFKPLETCVSEQHNYHWHDGVKRFFKCPCGNRSISLDRLPQKHCSNCGLFKWERDGMLKEKTGPKIGGETLLPRGEEYAKFLNSLK
SIO_010081: MCM10
subclass of: SO_0000673
so part of: MCM10
location: join(1452653..1452659,1454845..1455183,1455988..1456092,1456225..1456365,1457907..1458078,1459931..1460096,1461608..1461775,1462949..1463065,1465776..1465975,1467353..1467453,1468089..1468199,1468287..1468404,1469887..1470115,1471213..1471357,1472115..1472233,1474122..1474235,1476784..1476929,1480420..1480462,1480549..1480632)
location: region:1452653-1480632:1
so has part: feature:1452653-1452659:1:exon
so has part: feature:1454845-1455183:1:exon
so has part: feature:1455988-1456092:1:exon
so has part: feature:1456225-1456365:1:exon
so has part: feature:1457907-1458078:1:exon
so has part: feature:1459931-1460096:1:exon
so has part: feature:1461608-1461775:1:exon
so has part: feature:1462949-1463065:1:exon
so has part: feature:1465776-1465975:1:exon
so has part: feature:1467353-1467453:1:exon
so has part: feature:1468089-1468199:1:exon
so has part: feature:1468287-1468404:1:exon
so has part: feature:1469887-1470115:1:exon
so has part: feature:1471213-1471357:1:exon
so has part: feature:1472115-1472233:1:exon
so has part: feature:1474122-1474235:1:exon
so has part: feature:1476784-1476929:1:exon
so has part: feature:1480420-1480462:1:exon
so has part: feature:1480549-1480632:1:exon

XP_031300380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1452653-1452659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1454845-1455183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1455988-1456092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1456225-1456365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1457907-1458078:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1459931-1460096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1461608-1461775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1462949-1463065:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1465776-1465975:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1467353-1467453:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1468089-1468199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468287-1468404:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1469887-1470115:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1471213-1471357:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1472115-1472233:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1474122-1474235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1476784-1476929:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1480420-1480462:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1480549-1480632:1:exon

MCM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MCM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MCM10 homolog isoform X1
translation: MDGEEDDLSLLTALLEENELALDCNSQESQPLTQDVGEPDSFDELFDTDGDGESYTEEANDEAEKPEDQKENLAALFGDTEDLTDEEEVPMLQSAEKRVLPAPAPRQGKTNQELQDELKKLQEQMKSLQEQLKLTTIKPPASPALLRKSPVDKAPRPPLKEKKVQRIQESACLSAELDVLAAPNPRQVARAPKLSPAEPKSSSSKLTSVPSQPLRTTPGNKPSGMTRDQSAGTPRTSVEMAQTVSVEAFSGLRLRKPRVSSTEMNKKMTGRKLIRLSQLKEKMAREKLEEIDWVTFGVILKKITPQSSNSGKTFSIWRLNDLRDLTQYVSLFLFGEVHKQLWKTEQGTVVGLLNANPMKPKDGSEEVCLSIDHPQKILIMGEALDLGTCKAKKKNGEPCTQTVNLNDCEYCQYHIQAQYKKLSARRADLQSTFSGGRIPKKFARKGISLKERLCQDGFYYGGVSSASYAASIAAAVAPKKKIQTTLTNLVVKGTDLILQETRQKLGIPQKSLSCSEEFRELMDLPTCGARNLKHHLAKATPSGTMGSLKPAFQSISASALLKQQKQRMLEMRKKKSEDIQKRFLQSSSEVKNLAAPSSSLQPPLQSPPVGAEFPRMEGAPATQTPKLARGISEGDDVLFFDESPPPRPKLSALAEAKKLAAITKLRAKGQMLQKTDPNSIKKKLKKPQDVLEVKERAETSSILSPQDEGGLEPARKKRREQLAYLESEEFQTILKAKSRHTGILKEAEAELQEQYFEPLVKKEQMEEKMRSIREVKCRVVTCKTCAYTHFKPLETCVSEQHNYHWHDGVKRFFKCPCGNRSISLDRLPQKHCSNCGLFKWERDGMLKEKTGPKIGGETLLPRGEEYAKFLNSLK
SIO_010081: MCM10
subclass of: SO_0000673
so part of: MCM10
location: join(1452653..1452659,1454845..1455183,1455988..1456092,1456225..1456365,1457907..1458078,1459931..1460096,1461608..1461775,1462949..1463065,1465776..1465975,1467353..1467453,1468089..1468199,1468287..1468404,1469887..1470115,1471213..1471357,1472115..1472233,1474122..1474235,1476784..1476929,1480420..1480462,1480549..1480632)
location: region:1452653-1480632:1
so has part: feature:1452653-1452659:1:exon
so has part: feature:1454845-1455183:1:exon
so has part: feature:1455988-1456092:1:exon
so has part: feature:1456225-1456365:1:exon
so has part: feature:1457907-1458078:1:exon
so has part: feature:1459931-1460096:1:exon
so has part: feature:1461608-1461775:1:exon
so has part: feature:1462949-1463065:1:exon
so has part: feature:1465776-1465975:1:exon
so has part: feature:1467353-1467453:1:exon
so has part: feature:1468089-1468199:1:exon
so has part: feature:1468287-1468404:1:exon
so has part: feature:1469887-1470115:1:exon
so has part: feature:1471213-1471357:1:exon
so has part: feature:1472115-1472233:1:exon
so has part: feature:1474122-1474235:1:exon
so has part: feature:1476784-1476929:1:exon
so has part: feature:1480420-1480462:1:exon
so has part: feature:1480549-1480632:1:exon

XP_031300381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1452653-1452659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1454845-1455183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1455988-1456092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1456225-1456365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1457907-1458078:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1459931-1460096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1461608-1461775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1462949-1463065:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1465776-1465975:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1467353-1467453:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1468089-1468199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468287-1468404:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1469887-1470115:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1471213-1471357:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1472115-1472233:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1474122-1474235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1476784-1476929:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1480420-1480462:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1480549-1480632:1:exon

MCM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MCM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MCM10 homolog isoform X2
translation: MDGEEDDLSLLTALLEENELALDCNSQESQPLTQDVGEPDSFDELFDTDGDGESYTEEANDEAEKPEDQKENLAALFGDTEDLTDEEEVPMLQSAEKRVLPAPAPRQGKTNQELQDELKKLQEQMKSLQEQLKLTTIKPPASPALLRKSPDKAPRPPLKEKKVQRIQESACLSAELDVLAAPNPRQVARAPKLSPAEPKSSSSKLTSVPSQPLRTTPGNKPSGMTRDQSAGTPRTSVEMAQTVSVEAFSGLRLRKPRVSSTEMNKKMTGRKLIRLSQLKEKMAREKLEEIDWVTFGVILKKITPQSSNSGKTFSIWRLNDLRDLTQYVSLFLFGEVHKQLWKTEQGTVVGLLNANPMKPKDGSEEVCLSIDHPQKILIMGEALDLGTCKAKKKNGEPCTQTVNLNDCEYCQYHIQAQYKKLSARRADLQSTFSGGRIPKKFARKGISLKERLCQDGFYYGGVSSASYAASIAAAVAPKKKIQTTLTNLVVKGTDLILQETRQKLGIPQKSLSCSEEFRELMDLPTCGARNLKHHLAKATPSGTMGSLKPAFQSISASALLKQQKQRMLEMRKKKSEDIQKRFLQSSSEVKNLAAPSSSLQPPLQSPPVGAEFPRMEGAPATQTPKLARGISEGDDVLFFDESPPPRPKLSALAEAKKLAAITKLRAKGQMLQKTDPNSIKKKLKKPQDVLEVKERAETSSILSPQDEGGLEPARKKRREQLAYLESEEFQTILKAKSRHTGILKEAEAELQEQYFEPLVKKEQMEEKMRSIREVKCRVVTCKTCAYTHFKPLETCVSEQHNYHWHDGVKRFFKCPCGNRSISLDRLPQKHCSNCGLFKWERDGMLKEKTGPKIGGETLLPRGEEYAKFLNSLK
SIO_010081: MCM10
subclass of: SO_0000673
so part of: MCM10
location: join(1452653..1452659,1454845..1455183,1455988..1456092,1456228..1456365,1457907..1458078,1459931..1460096,1461608..1461775,1462949..1463065,1465776..1465975,1467353..1467453,1468089..1468199,1468287..1468404,1469887..1470115,1471213..1471357,1472115..1472233,1474122..1474235,1476784..1476929,1480420..1480462,1480549..1480632)
location: region:1452653-1480632:1
so has part: feature:1452653-1452659:1:exon
so has part: feature:1454845-1455183:1:exon
so has part: feature:1455988-1456092:1:exon
so has part: feature:1456228-1456365:1:exon
so has part: feature:1457907-1458078:1:exon
so has part: feature:1459931-1460096:1:exon
so has part: feature:1461608-1461775:1:exon
so has part: feature:1462949-1463065:1:exon
so has part: feature:1465776-1465975:1:exon
so has part: feature:1467353-1467453:1:exon
so has part: feature:1468089-1468199:1:exon
so has part: feature:1468287-1468404:1:exon
so has part: feature:1469887-1470115:1:exon
so has part: feature:1471213-1471357:1:exon
so has part: feature:1472115-1472233:1:exon
so has part: feature:1474122-1474235:1:exon
so has part: feature:1476784-1476929:1:exon
so has part: feature:1480420-1480462:1:exon
so has part: feature:1480549-1480632:1:exon

XP_010991993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1452653-1452659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1454845-1455183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1455988-1456092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1456228-1456365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1457907-1458078:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1459931-1460096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1461608-1461775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1462949-1463065:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1465776-1465975:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1467353-1467453:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1468089-1468199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1468287-1468404:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1469887-1470115:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1471213-1471357:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1472115-1472233:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1474122-1474235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1476784-1476929:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1480420-1480462:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1480549-1480632:1:exon

LOC105100657
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105100657
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1463221..1464367)
location: region:1463221-1464367:-1
so has part: feature:1463221-1464367:-1:exon

105100657
type: Gene
SIO_000068: ncbigene

position:1463221:-1
position: 1463221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1464367:-1
position: 1464367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1463221-1464367:-1:exon

LOC105100657
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105100657
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105100657
subclass of: SO_0000673
so part of: LOC105100657
location: complement(1463221..1463228)
location: region:1463221-1463228:-1
so has part: feature:1463221-1463228:-1:exon

position:1463228:-1
position: 1463228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1463221-1463228:-1:exon

LOC105100657
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105100657
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105100657
subclass of: SO_0000673
so part of: LOC105100657
location: complement(1463647..1464367)
location: region:1463647-1464367:-1
so has part: feature:1463647-1464367:-1:exon

position:1463647:-1
position: 1463647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1463647-1464367:-1:exon

UCMA
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: UCMA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1491074..1500872)
location: region:1491074-1500872:-1
so has part: feature:1491074-1500872:-1:exon
subclass of: SO_0000010

105100654
type: Gene
SIO_000068: ncbigene

position:1491074:-1
position: 1491074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1500872:-1
position: 1500872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491074-1500872:-1:exon

UCMA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: UCMA
product: upper zone of growth plate and cartilage matrix associated
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010993693.2
SIO_010081: UCMA
subclass of: SO_0000673
so part of: UCMA
location: complement(join(1491074..1491727,1496240..1496338,1500370..1500435,1500764..1500872))
location: region:1491074-1500872:-1
so has part: feature:1500764-1500872:-1:exon
so has part: feature:1500370-1500435:-1:exon
so has part: feature:1496240-1496338:-1:exon
so has part: feature:1491074-1491727:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1500764-1500872:-1:exon

position:1500764:-1
position: 1500764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1500370-1500435:-1:exon

position:1500370:-1
position: 1500370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1500435:-1
position: 1500435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1496240-1496338:-1:exon

position:1496240:-1
position: 1496240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1496338:-1
position: 1496338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1491074-1491727:-1:exon

position:1491727:-1
position: 1491727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UCMA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: UCMA
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1500807..1500809),aa:OTHER)
product: LOW QUALITY PROTEIN: unique cartilage matrix-associated protein
translation: MAWRXLVLTSCLSAAVLLSMLQEGTGVSVGTRQVGGQEAQEVENRQRLRADELRREHHEEQRNESENFAEEQNDEQEERSREPIEQWRQWHYHGLYPSYLYNRHI
SIO_010081: UCMA
subclass of: SO_0000673
so part of: UCMA
location: complement(join(1491633..1491727,1496240..1496338,1500370..1500435,1500764..1500821))
location: region:1491633-1500821:-1
so has part: feature:1500764-1500821:-1:exon
so has part: feature:1500370-1500435:-1:exon
so has part: feature:1496240-1496338:-1:exon
so has part: feature:1491633-1491727:-1:exon

XP_010991995.2
type: Protein
SIO_000068: ncbiprotein

position:1491633:-1
position: 1491633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1500821:-1
position: 1500821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1500764-1500821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1500370-1500435:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1496240-1496338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1491633-1491727:-1:exon

LOC116150605
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150605
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1542613..1542720)
location: region:1542613-1542720:-1
so has part: feature:1542613-1542720:-1:exon
subclass of: SO_0000578

116150605
type: Gene
SIO_000068: ncbigene

position:1542613:-1
position: 1542613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1542720:-1
position: 1542720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1542613-1542720:-1:exon

LOC116150605
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snoRNA
gene: LOC116150605
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004134337.1
SIO_010081: LOC116150605
subclass of: SO_0000673
so part of: LOC116150605
location: complement(1542613..1542720)
location: region:1542613-1542720:-1
so has part: feature:1542613-1542720:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1542613-1542720:-1:exon

PHYH
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: PHYH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1544001..1560457)
location: region:1544001-1560457:-1
so has part: feature:1544001-1560457:-1:exon
subclass of: SO_0000010

105100655
type: Gene
SIO_000068: ncbigene

position:1544001:-1
position: 1544001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1560457:-1
position: 1560457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1544001-1560457:-1:exon

PHYH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PHYH
product: phytanoyl-CoA 2-hydroxylase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_031444522.1
SIO_010081: PHYH
subclass of: SO_0000673
so part of: PHYH
location: complement(join(1544001..1544313,1546094..1546231,1548112..1548261,1550171..1550352,1551588..1551669,1554134..1554302,1554931..1555041,1556036..1556094,1560192..1560454))
location: region:1544001-1560454:-1
so has part: feature:1560192-1560454:-1:exon
so has part: feature:1556036-1556094:-1:exon
so has part: feature:1554931-1555041:-1:exon
so has part: feature:1554134-1554302:-1:exon
so has part: feature:1551588-1551669:-1:exon
so has part: feature:1550171-1550352:-1:exon
so has part: feature:1548112-1548261:-1:exon
so has part: feature:1546094-1546231:-1:exon
so has part: feature:1544001-1544313:-1:exon

position:1560454:-1
position: 1560454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560192-1560454:-1:exon

position:1560192:-1
position: 1560192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1556036-1556094:-1:exon

position:1556036:-1
position: 1556036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1556094:-1
position: 1556094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1554931-1555041:-1:exon

position:1554931:-1
position: 1554931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1555041:-1
position: 1555041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1554134-1554302:-1:exon

position:1554134:-1
position: 1554134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1554302:-1
position: 1554302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1551588-1551669:-1:exon

position:1551588:-1
position: 1551588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1551669:-1
position: 1551669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1550171-1550352:-1:exon

position:1550171:-1
position: 1550171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1550352:-1
position: 1550352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1548112-1548261:-1:exon

position:1548112:-1
position: 1548112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548261:-1
position: 1548261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1546094-1546231:-1:exon

position:1546094:-1
position: 1546094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1546231:-1
position: 1546231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1544001-1544313:-1:exon

position:1544313:-1
position: 1544313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHYH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PHYH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phytanoyl-CoA dioxygenase, peroxisomal isoform X1
translation: MDKDRASARLRILLRHLGGRSAGAVIAQPTSEGVSPASFHPQQFQYTLDNNVLSLEQRKFYEENGFLVIKNLVSDADIQRFRREFERICRNEVKPLGLTVMRDTTITKSEYAPSERTITKVQDFQEDEELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDTGRKTSRHPLHQDLHYFPFRPSSSIVCAWTAMEHIDRSNGCLVVLPGTHKGTLKPHDYPQWEGGVNIMFHGIQDYDKDNARVHVIMEKGDTVFFHPLLIHGSGRNKSQGFRKAISCHFAGANCHYIDVKGTSQENIEKEVLEVARKRHGLNDASLSLKDVWMLRARLVKGQRVNL
SIO_010081: PHYH
subclass of: SO_0000673
so part of: PHYH
location: complement(join(1544260..1544313,1546094..1546231,1548112..1548261,1550171..1550352,1551588..1551669,1554134..1554302,1554931..1555041,1556036..1556094,1560192..1560266))
location: region:1544260-1560266:-1
so has part: feature:1560192-1560266:-1:exon
so has part: feature:1556036-1556094:-1:exon
so has part: feature:1554931-1555041:-1:exon
so has part: feature:1554134-1554302:-1:exon
so has part: feature:1551588-1551669:-1:exon
so has part: feature:1550171-1550352:-1:exon
so has part: feature:1548112-1548261:-1:exon
so has part: feature:1546094-1546231:-1:exon
so has part: feature:1544260-1544313:-1:exon

XP_031300382.1
type: Protein
SIO_000068: ncbiprotein

position:1544260:-1
position: 1544260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1560266:-1
position: 1560266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560192-1560266:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556036-1556094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1554931-1555041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1554134-1554302:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551588-1551669:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1550171-1550352:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548112-1548261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1546094-1546231:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1544260-1544313:-1:exon

PHYH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PHYH
product: phytanoyl-CoA 2-hydroxylase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_031444523.1
SIO_010081: PHYH
subclass of: SO_0000673
so part of: PHYH
location: complement(join(1544343..1545391,1546094..1546231,1548112..1548261,1550171..1550352,1551588..1551669,1554134..1554302,1554931..1555041,1556036..1556094,1560192..1560457))
location: region:1544343-1560457:-1
so has part: feature:1560192-1560457:-1:exon
so has part: feature:1556036-1556094:-1:exon
so has part: feature:1554931-1555041:-1:exon
so has part: feature:1554134-1554302:-1:exon
so has part: feature:1551588-1551669:-1:exon
so has part: feature:1550171-1550352:-1:exon
so has part: feature:1548112-1548261:-1:exon
so has part: feature:1546094-1546231:-1:exon
so has part: feature:1544343-1545391:-1:exon

position:1544343:-1
position: 1544343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560192-1560457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556036-1556094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1554931-1555041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1554134-1554302:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551588-1551669:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1550171-1550352:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548112-1548261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1546094-1546231:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1544343-1545391:-1:exon

position:1545391:-1
position: 1545391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHYH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PHYH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phytanoyl-CoA dioxygenase, peroxisomal isoform X2
translation: MDKDRASARLRILLRHLGGRSAGAVIAQPTSEGVSPASFHPQQFQYTLDNNVLSLEQRKFYEENGFLVIKNLVSDADIQRFRREFERICRNEVKPLGLTVMRDTTITKSEYAPSERTITKVQDFQEDEELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDTGRKTSRHPLHQDLHYFPFRPSSSIVCAWTAMEHIDRSNGCLVVLPGTHKGTLKPHDYPQWEGGVNIMFHGIQDYDKDNARVHVIMEKGDTVFFHPLLIHGSGRNKSQGFRKAISCHFAGANCHYIDVKGTSQENIEKEVLEVARKRHGLNDASLSLKNL
SIO_010081: PHYH
subclass of: SO_0000673
so part of: PHYH
location: complement(join(1545383..1545391,1546094..1546231,1548112..1548261,1550171..1550352,1551588..1551669,1554134..1554302,1554931..1555041,1556036..1556094,1560192..1560266))
location: region:1545383-1560266:-1
so has part: feature:1560192-1560266:-1:exon
so has part: feature:1556036-1556094:-1:exon
so has part: feature:1554931-1555041:-1:exon
so has part: feature:1554134-1554302:-1:exon
so has part: feature:1551588-1551669:-1:exon
so has part: feature:1550171-1550352:-1:exon
so has part: feature:1548112-1548261:-1:exon
so has part: feature:1546094-1546231:-1:exon
so has part: feature:1545383-1545391:-1:exon

XP_031300383.1
type: Protein
SIO_000068: ncbiprotein

position:1545383:-1
position: 1545383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560192-1560266:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1556036-1556094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1554931-1555041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1554134-1554302:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551588-1551669:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1550171-1550352:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548112-1548261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1546094-1546231:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1545383-1545391:-1:exon

SEPHS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SEPHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1572423..1596114)
location: region:1572423-1596114:-1
so has part: feature:1572423-1596114:-1:exon
subclass of: SO_0000010

105100656
type: Gene
SIO_000068: ncbigene

position:1572423:-1
position: 1572423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596114:-1
position: 1596114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1572423-1596114:-1:exon

SEPHS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SEPHS1
product: selenophosphate synthetase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_031444524.1
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1572423..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585268,1586191..1586298,1588137..1588240,1592844..1593113,1595848..1596114))
location: region:1572423-1596114:-1
so has part: feature:1595848-1596114:-1:exon
so has part: feature:1592844-1593113:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585268:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1572423-1574334:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1595848-1596114:-1:exon

position:1595848:-1
position: 1595848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1592844-1593113:-1:exon

position:1592844:-1
position: 1592844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593113:-1
position: 1593113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1588137-1588240:-1:exon

position:1588137:-1
position: 1588137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1588240:-1
position: 1588240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1586191-1586298:-1:exon

position:1586191:-1
position: 1586191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1586298:-1
position: 1586298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1585114-1585268:-1:exon

position:1585114:-1
position: 1585114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1585268:-1
position: 1585268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1582523-1582613:-1:exon

position:1582523:-1
position: 1582523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582613:-1
position: 1582613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1580420-1580519:-1:exon

position:1580420:-1
position: 1580420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580519:-1
position: 1580519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1575810-1576022:-1:exon

position:1575810:-1
position: 1575810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1576022:-1
position: 1576022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1572423-1574334:-1:exon

position:1574334:-1
position: 1574334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SEPHS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SEPHS1
product: selenophosphate synthetase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_031444529.1
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1572423..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585235,1586191..1586298,1588137..1588240,1592844..1593113,1595848..1595995))
location: region:1572423-1595995:-1
so has part: feature:1595848-1595995:-1:exon
so has part: feature:1592844-1593113:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585235:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1572423-1574334:-1:exon

position:1595995:-1
position: 1595995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1595848-1595995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1592844-1593113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1585114-1585235:-1:exon

position:1585235:-1
position: 1585235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1572423-1574334:-1:exon

SEPHS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SEPHS1
product: selenophosphate synthetase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031444527.1
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1572423..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585268,1586191..1586298,1588137..1588240,1592844..1593113,1595678..1595809))
location: region:1572423-1595809:-1
so has part: feature:1595678-1595809:-1:exon
so has part: feature:1592844-1593113:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585268:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1572423-1574334:-1:exon

position:1595809:-1
position: 1595809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1595678-1595809:-1:exon

position:1595678:-1
position: 1595678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1592844-1593113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1585114-1585268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1572423-1574334:-1:exon

SEPHS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SEPHS1
product: selenophosphate synthetase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031444526.1
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1572423..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585268,1586191..1586298,1588137..1588240,1592844..1593113,1595031..1595383))
location: region:1572423-1595383:-1
so has part: feature:1595031-1595383:-1:exon
so has part: feature:1592844-1593113:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585268:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1572423-1574334:-1:exon

position:1595383:-1
position: 1595383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1595031-1595383:-1:exon

position:1595031:-1
position: 1595031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1592844-1593113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1585114-1585268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1572423-1574334:-1:exon

SEPHS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SEPHS1
product: selenophosphate synthetase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_010993695.2
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1572423..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585268,1586191..1586298,1588137..1588240,1592844..1593113,1595035..1595382))
location: region:1572423-1595382:-1
so has part: feature:1595035-1595382:-1:exon
so has part: feature:1592844-1593113:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585268:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1572423-1574334:-1:exon

position:1595382:-1
position: 1595382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1595035-1595382:-1:exon

position:1595035:-1
position: 1595035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1592844-1593113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1585114-1585268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1572423-1574334:-1:exon

SEPHS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SEPHS1
product: selenophosphate synthetase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031444528.1
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1572423..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585268,1586191..1586298,1588137..1588240,1592844..1593113,1594541..1595001))
location: region:1572423-1595001:-1
so has part: feature:1594541-1595001:-1:exon
so has part: feature:1592844-1593113:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585268:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1572423-1574334:-1:exon

position:1595001:-1
position: 1595001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1594541-1595001:-1:exon

position:1594541:-1
position: 1594541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1592844-1593113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1585114-1585268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1572423-1574334:-1:exon

SEPHS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SEPHS1
product: selenophosphate synthetase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_010993696.2
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1572423..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585268,1586191..1586298,1588137..1588240,1592844..1593113,1594479..1594501))
location: region:1572423-1594501:-1
so has part: feature:1594479-1594501:-1:exon
so has part: feature:1592844-1593113:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585268:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1572423-1574334:-1:exon

position:1594501:-1
position: 1594501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1594479-1594501:-1:exon

position:1594479:-1
position: 1594479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1592844-1593113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1585114-1585268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1572423-1574334:-1:exon

SEPHS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SEPHS1
product: selenophosphate synthetase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_031444525.1
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1572423..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585268,1586191..1586298,1588137..1588240,1592844..1593113,1593461..1594460))
location: region:1572423-1594460:-1
so has part: feature:1593461-1594460:-1:exon
so has part: feature:1592844-1593113:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585268:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1572423-1574334:-1:exon

position:1594460:-1
position: 1594460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1593461-1594460:-1:exon

position:1593461:-1
position: 1593461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1592844-1593113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1585114-1585268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1572423-1574334:-1:exon

SEPHS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SEPHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenide, water dikinase 1 isoform X2
translation: MSARESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGISNKMTDRGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPGATS
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1574120..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585235,1586191..1586298,1588137..1588240,1592844..1593036))
location: region:1574120-1593036:-1
so has part: feature:1592844-1593036:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585235:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1574120-1574334:-1:exon

XP_031300389.1
type: Protein
SIO_000068: ncbiprotein

position:1574120:-1
position: 1574120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593036:-1
position: 1593036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1592844-1593036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585114-1585235:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1574120-1574334:-1:exon

SEPHS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SEPHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenide, water dikinase 1 isoform X1
translation: MSARESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGISNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPGATS
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1574120..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585268,1586191..1586298,1588137..1588240,1592844..1593036))
location: region:1574120-1593036:-1
so has part: feature:1592844-1593036:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585268:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1574120-1574334:-1:exon

XP_031300384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1592844-1593036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585114-1585268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1574120-1574334:-1:exon

SEPHS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SEPHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenide, water dikinase 1 isoform X1
translation: MSARESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGISNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPGATS
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1574120..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585268,1586191..1586298,1588137..1588240,1592844..1593036))
location: region:1574120-1593036:-1
so has part: feature:1592844-1593036:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585268:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1574120-1574334:-1:exon

XP_031300385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1592844-1593036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585114-1585268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1574120-1574334:-1:exon

SEPHS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SEPHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenide, water dikinase 1 isoform X1
translation: MSARESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGISNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPGATS
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1574120..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585268,1586191..1586298,1588137..1588240,1592844..1593036))
location: region:1574120-1593036:-1
so has part: feature:1592844-1593036:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585268:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1574120-1574334:-1:exon

XP_031300386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1592844-1593036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585114-1585268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1574120-1574334:-1:exon

SEPHS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SEPHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenide, water dikinase 1 isoform X1
translation: MSARESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGISNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPGATS
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1574120..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585268,1586191..1586298,1588137..1588240,1592844..1593036))
location: region:1574120-1593036:-1
so has part: feature:1592844-1593036:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585268:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1574120-1574334:-1:exon

XP_031300387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1592844-1593036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585114-1585268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1574120-1574334:-1:exon

SEPHS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SEPHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenide, water dikinase 1 isoform X1
translation: MSARESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGISNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPGATS
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1574120..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585268,1586191..1586298,1588137..1588240,1592844..1593036))
location: region:1574120-1593036:-1
so has part: feature:1592844-1593036:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585268:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1574120-1574334:-1:exon

XP_031300388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1592844-1593036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585114-1585268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1574120-1574334:-1:exon

SEPHS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SEPHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenide, water dikinase 1 isoform X1
translation: MSARESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGISNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPGATS
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1574120..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585268,1586191..1586298,1588137..1588240,1592844..1593036))
location: region:1574120-1593036:-1
so has part: feature:1592844-1593036:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585268:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1574120-1574334:-1:exon

XP_010991997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1592844-1593036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585114-1585268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1574120-1574334:-1:exon

SEPHS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SEPHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenide, water dikinase 1 isoform X1
translation: MSARESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGISNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPGATS
SIO_010081: SEPHS1
subclass of: SO_0000673
so part of: SEPHS1
location: complement(join(1574120..1574334,1575810..1576022,1580420..1580519,1582523..1582613,1585114..1585268,1586191..1586298,1588137..1588240,1592844..1593036))
location: region:1574120-1593036:-1
so has part: feature:1592844-1593036:-1:exon
so has part: feature:1588137-1588240:-1:exon
so has part: feature:1586191-1586298:-1:exon
so has part: feature:1585114-1585268:-1:exon
so has part: feature:1582523-1582613:-1:exon
so has part: feature:1580420-1580519:-1:exon
so has part: feature:1575810-1576022:-1:exon
so has part: feature:1574120-1574334:-1:exon

XP_010991998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1592844-1593036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1588137-1588240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1586191-1586298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585114-1585268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1582523-1582613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1580420-1580519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1575810-1576022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1574120-1574334:-1:exon

LOC116150489
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150489
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1594922..1659945
location: region:1594922-1659945:1
so has part: feature:1594922-1659945:1:exon
subclass of: SO_0000011

116150489
type: Gene
SIO_000068: ncbigene

position:1594922:1
position: 1594922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1659945:1
position: 1659945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1594922-1659945:1:exon

LOC116150489
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150489
product: uncharacterized LOC116150489, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004134204.1
SIO_010081: LOC116150489
subclass of: SO_0000673
so part of: LOC116150489
location: join(1594922..1594993,1648609..1648889,1652929..1653087,1653294..1659945)
location: region:1594922-1659945:1
so has part: feature:1594922-1594993:1:exon
so has part: feature:1648609-1648889:1:exon
so has part: feature:1652929-1653087:1:exon
so has part: feature:1653294-1659945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1594922-1594993:1:exon

position:1594993:1
position: 1594993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1648609-1648889:1:exon

position:1648609:1
position: 1648609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648889:1
position: 1648889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1652929-1653087:1:exon

position:1652929:1
position: 1652929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653087:1
position: 1653087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1653294-1659945:1:exon

position:1653294:1
position: 1653294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116150489
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150489
product: uncharacterized LOC116150489, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_004134206.1
SIO_010081: LOC116150489
subclass of: SO_0000673
so part of: LOC116150489
location: join(1594942..1594993,1652899..1653087,1653294..1659945)
location: region:1594942-1659945:1
so has part: feature:1594942-1594993:1:exon
so has part: feature:1652899-1653087:1:exon
so has part: feature:1653294-1659945:1:exon

position:1594942:1
position: 1594942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1594942-1594993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1652899-1653087:1:exon

position:1652899:1
position: 1652899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1653294-1659945:1:exon

LOC116150489
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150489
product: uncharacterized LOC116150489, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004134203.1
SIO_010081: LOC116150489
subclass of: SO_0000673
so part of: LOC116150489
location: join(1594944..1594993,1637769..1638035,1648609..1648889,1652929..1653087,1653294..1659945)
location: region:1594944-1659945:1
so has part: feature:1594944-1594993:1:exon
so has part: feature:1637769-1638035:1:exon
so has part: feature:1648609-1648889:1:exon
so has part: feature:1652929-1653087:1:exon
so has part: feature:1653294-1659945:1:exon

position:1594944:1
position: 1594944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1594944-1594993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1637769-1638035:1:exon

position:1637769:1
position: 1637769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1638035:1
position: 1638035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1648609-1648889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1652929-1653087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1653294-1659945:1:exon

LOC116150489
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150489
product: uncharacterized LOC116150489, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_004134207.1
SIO_010081: LOC116150489
subclass of: SO_0000673
so part of: LOC116150489
location: join(1594959..1594993,1652929..1653087,1653294..1659945)
location: region:1594959-1659945:1
so has part: feature:1594959-1594993:1:exon
so has part: feature:1652929-1653087:1:exon
so has part: feature:1653294-1659945:1:exon

position:1594959:1
position: 1594959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1594959-1594993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1652929-1653087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653294-1659945:1:exon

LOC116150490
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150490
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1596147..1601183
location: region:1596147-1601183:1
so has part: feature:1596147-1601183:1:exon
subclass of: SO_0000011

116150490
type: Gene
SIO_000068: ncbigene

position:1596147:1
position: 1596147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1601183:1
position: 1601183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1596147-1601183:1:exon

LOC116150490
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150490
product: uncharacterized LOC116150490, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004134211.1
SIO_010081: LOC116150490
subclass of: SO_0000673
so part of: LOC116150490
location: join(1596147..1597129,1600888..1601183)
location: region:1596147-1601183:1
so has part: feature:1596147-1597129:1:exon
so has part: feature:1600888-1601183:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1596147-1597129:1:exon

position:1597129:1
position: 1597129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1600888-1601183:1:exon

position:1600888:1
position: 1600888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116150490
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150490
product: uncharacterized LOC116150490, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XR_004134210.1
SIO_010081: LOC116150490
subclass of: SO_0000673
so part of: LOC116150490
location: join(1596147..1597129,1600891..1601183)
location: region:1596147-1601183:1
so has part: feature:1596147-1597129:1:exon
so has part: feature:1600891-1601183:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1596147-1597129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1600891-1601183:1:exon

position:1600891:1
position: 1600891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116150489
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150489
product: uncharacterized LOC116150489, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004134209.1
SIO_010081: LOC116150489
subclass of: SO_0000673
so part of: LOC116150489
location: join(1609939..1613306,1619110..1619233,1652929..1653087,1653294..1659945)
location: region:1609939-1659945:1
so has part: feature:1609939-1613306:1:exon
so has part: feature:1619110-1619233:1:exon
so has part: feature:1652929-1653087:1:exon
so has part: feature:1653294-1659945:1:exon

position:1609939:1
position: 1609939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1609939-1613306:1:exon

position:1613306:1
position: 1613306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1619110-1619233:1:exon

position:1619110:1
position: 1619110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1619233:1
position: 1619233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1652929-1653087:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653294-1659945:1:exon

LOC116150489
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150489
product: uncharacterized LOC116150489, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004134208.1
SIO_010081: LOC116150489
subclass of: SO_0000673
so part of: LOC116150489
location: join(1619549..1621335,1652899..1653087,1653294..1659945)
location: region:1619549-1659945:1
so has part: feature:1619549-1621335:1:exon
so has part: feature:1652899-1653087:1:exon
so has part: feature:1653294-1659945:1:exon

position:1619549:1
position: 1619549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1619549-1621335:1:exon

position:1621335:1
position: 1621335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1652899-1653087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653294-1659945:1:exon

LOC116150489
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150489
product: uncharacterized LOC116150489, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004134202.1
SIO_010081: LOC116150489
subclass of: SO_0000673
so part of: LOC116150489
location: join(1637211..1637488,1637769..1638035,1648609..1648889,1652899..1653087,1653294..1659945)
location: region:1637211-1659945:1
so has part: feature:1637211-1637488:1:exon
so has part: feature:1637769-1638035:1:exon
so has part: feature:1648609-1648889:1:exon
so has part: feature:1652899-1653087:1:exon
so has part: feature:1653294-1659945:1:exon

position:1637211:1
position: 1637211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1637211-1637488:1:exon

position:1637488:1
position: 1637488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1637769-1638035:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1648609-1648889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1652899-1653087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1653294-1659945:1:exon

LOC116150489
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150489
product: uncharacterized LOC116150489, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004134201.1
SIO_010081: LOC116150489
subclass of: SO_0000673
so part of: LOC116150489
location: join(1637212..1637488,1637769..1638035,1648609..1648889,1652929..1653087,1653294..1659945)
location: region:1637212-1659945:1
so has part: feature:1637212-1637488:1:exon
so has part: feature:1637769-1638035:1:exon
so has part: feature:1648609-1648889:1:exon
so has part: feature:1652929-1653087:1:exon
so has part: feature:1653294-1659945:1:exon

position:1637212:1
position: 1637212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1637212-1637488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1637769-1638035:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1648609-1648889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1652929-1653087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1653294-1659945:1:exon

LOC116150489
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150489
product: uncharacterized LOC116150489, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004134205.1
SIO_010081: LOC116150489
subclass of: SO_0000673
so part of: LOC116150489
location: join(1637216..1637488,1637769..1638035,1652929..1653087,1653294..1659945)
location: region:1637216-1659945:1
so has part: feature:1637216-1637488:1:exon
so has part: feature:1637769-1638035:1:exon
so has part: feature:1652929-1653087:1:exon
so has part: feature:1653294-1659945:1:exon

position:1637216:1
position: 1637216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1637216-1637488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1637769-1638035:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1652929-1653087:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653294-1659945:1:exon

BEND7
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1668408..1748959)
location: region:1668408-1748959:-1
so has part: feature:1668408-1748959:-1:exon
subclass of: SO_0000010

105100616
type: Gene
SIO_000068: ncbigene

position:1668408:-1
position: 1668408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1748959:-1
position: 1748959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1668408-1748959:-1:exon

BEND7
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004134212.1
SIO_010081: BEND7
so part of: BEND7
location: complement(join(1668408..1672051,1673406..1673556,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748954))
location: region:1668408-1748954:-1
so has part: feature:1748800-1748954:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1673406-1673556:-1:exon
so has part: feature:1668408-1672051:-1:exon

position:1748954:-1
position: 1748954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748954:-1:exon

position:1748800:-1
position: 1748800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

position:1745400:-1
position: 1745400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745483:-1
position: 1745483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

position:1723809:-1
position: 1723809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1724108:-1
position: 1724108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

position:1720971:-1
position: 1720971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1721093:-1
position: 1721093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

position:1717245:-1
position: 1717245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1717510:-1
position: 1717510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

position:1706653:-1
position: 1706653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1706878:-1
position: 1706878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

position:1687206:-1
position: 1687206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1687325:-1
position: 1687325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679468:-1:exon

position:1679415:-1
position: 1679415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1679468:-1
position: 1679468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1673406-1673556:-1:exon

position:1673406:-1
position: 1673406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1673556:-1
position: 1673556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1668408-1672051:-1:exon

position:1672051:-1
position: 1672051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BEND7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031444534.1
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1668408..1673556,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748954))
location: region:1668408-1748954:-1
so has part: feature:1748800-1748954:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1668408-1673556:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1668408-1673556:-1:exon

BEND7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X4
translation: MDYHHEVYKVSEFSSDVNGEAKETQPIFLGDESMEIKKQITGMRRLLNDSTGRTYQRVGKEGEKLKEEPQDLGSVWPPRLNSAEAPQSLHPPSRGAWNELPPQSGHFSGQYGTRSRTFQSQPHAAGSANGELPAMNPSVGPSCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKRNKKKKVAPKTAEPLTVKQKPGVLESEKKTALAPENPSLPATEHTPSGENHILGFGIIVESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNGKRKRGLNDNRKGLDQNIVGAIKVFTEKYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSAEAADGDERLDGVSLPPTGTFISL
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1673537..1673556,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748803))
location: region:1673537-1748803:-1
so has part: feature:1748800-1748803:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1673537-1673556:-1:exon

XP_031300394.1
type: Protein
SIO_000068: ncbiprotein

position:1673537:-1
position: 1673537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1748803:-1
position: 1748803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1673537-1673556:-1:exon

BEND7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031444533.1
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1673664..1678485,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1748800..1748959))
location: region:1673664-1748959:-1
so has part: feature:1748800-1748959:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1673664-1678485:-1:exon

position:1673664:-1
position: 1673664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748959:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1673664-1678485:-1:exon

position:1678485:-1
position: 1678485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BEND7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031444532.1
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1673664..1678485,1679415..1679465,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748958))
location: region:1673664-1748958:-1
so has part: feature:1748800-1748958:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679465:-1:exon
so has part: feature:1673664-1678485:-1:exon

position:1748958:-1
position: 1748958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679465:-1:exon

position:1679465:-1
position: 1679465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1673664-1678485:-1:exon

BEND7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031444531.1
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1673664..1678485,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748958))
location: region:1673664-1748958:-1
so has part: feature:1748800-1748958:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1673664-1678485:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1673664-1678485:-1:exon

BEND7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031444540.1
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1673664..1677773,1679415..1679465,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748955))
location: region:1673664-1748955:-1
so has part: feature:1748800-1748955:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679465:-1:exon
so has part: feature:1673664-1677773:-1:exon

position:1748955:-1
position: 1748955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1673664-1677773:-1:exon

position:1677773:-1
position: 1677773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BEND7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031444542.1
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1673664..1677757,1679415..1679465,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748954))
location: region:1673664-1748954:-1
so has part: feature:1748800-1748954:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679465:-1:exon
so has part: feature:1673664-1677757:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1673664-1677757:-1:exon

position:1677757:-1
position: 1677757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BEND7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031444535.1
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1673664..1677773,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748954))
location: region:1673664-1748954:-1
so has part: feature:1748800-1748954:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1673664-1677773:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1673664-1677773:-1:exon

BEND7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_031444541.1
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1673664..1677757,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748953))
location: region:1673664-1748953:-1
so has part: feature:1748800-1748953:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1673664-1677757:-1:exon

position:1748953:-1
position: 1748953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1673664-1677757:-1:exon

BEND7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_031444543.1
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1673664..1678485,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1747791..1748226))
location: region:1673664-1748226:-1
so has part: feature:1747791-1748226:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1673664-1678485:-1:exon

position:1748226:-1
position: 1748226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1747791-1748226:-1:exon

position:1747791:-1
position: 1747791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1673664-1678485:-1:exon

BEND7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031444537.1
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1673664..1678485,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1747791..1747894))
location: region:1673664-1747894:-1
so has part: feature:1747791-1747894:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1673664-1678485:-1:exon

position:1747894:-1
position: 1747894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1747791-1747894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1673664-1678485:-1:exon

BEND7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031444538.1
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1673664..1678485,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1736472..1736619))
location: region:1673664-1736619:-1
so has part: feature:1736472-1736619:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1673664-1678485:-1:exon

position:1736619:-1
position: 1736619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1736472-1736619:-1:exon

position:1736472:-1
position: 1736472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1673664-1678485:-1:exon

BEND7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031444539.1
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1673664..1678485,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1736491..1736598))
location: region:1673664-1736598:-1
so has part: feature:1736491-1736598:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1673664-1678485:-1:exon

position:1736598:-1
position: 1736598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1736491-1736598:-1:exon

position:1736491:-1
position: 1736491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1673664-1678485:-1:exon

BEND7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X9
translation: MDYHHEVYKVSEFSSDVNGEAKETQPIFLGDESMEIKKQITGMRRLLNDSTGRTYQRVGKEGEKLKEEPQDLGSVWPPRLNSAEAPQSLHPPSRGAWNELPPQSGHFSGQYGTRSRTFQSQPHAAGSANGELPAMNPSVGPSCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKRNKKKKVAPKTAEPLTVKQKPGVLESEKKTALAPENPSLPATEHTPSGENHILGFGIIVESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNGKRKRGLNDNRKGLDQNIVGAIKVFTEKYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSEAADGDERLDGVSLPPTGKKA
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1677744..1677757,1679415..1679465,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748803))
location: region:1677744-1748803:-1
so has part: feature:1748800-1748803:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679465:-1:exon
so has part: feature:1677744-1677757:-1:exon

XP_031300402.1
type: Protein
SIO_000068: ncbiprotein

position:1677744:-1
position: 1677744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1677744-1677757:-1:exon

BEND7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X8
translation: MDYHHEVYKVSEFSSDVNGEAKETQPIFLGDESMEIKKQITGMRRLLNDSTGRTYQRVGKEGEKLKEEPQDLGSVWPPRLNSAEAPQSLHPPSRGAWNELPPQSGHFSGQYGTRSRTFQSQPHAAGSANGELPAMNPSVGPSCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKRNKKKKVAPKTAEPLTVKQKPGVLESEKKTALAPENPSLPATEHTPSGENHILGFGIIVESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNGKRKRGLNDNRKGLDQNIVGAIKVFTEKYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSAEAADGDERLDGVSLPPTGKKA
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1677744..1677757,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748803))
location: region:1677744-1748803:-1
so has part: feature:1748800-1748803:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1677744-1677757:-1:exon

XP_031300401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1677744-1677757:-1:exon

BEND7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X7
translation: MDYHHEVYKVSEFSSDVNGEAKETQPIFLGDESMEIKKQITGMRRLLNDSTGRTYQRVGKEGEKLKEEPQDLGSVWPPRLNSAEAPQSLHPPSRGAWNELPPQSGHFSGQYGTRSRTFQSQPHAAGSANGELPAMNPSVGPSCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKRNKKKKVAPKTAEPLTVKQKPGVLESEKKTALAPENPSLPATEHTPSGENHILGFGIIVESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNGKRKRGLNDNRKGLDQNIVGAIKVFTEKYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSEAADGDERLDGVSLPPTVLLFYR
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1677754..1677773,1679415..1679465,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748803))
location: region:1677754-1748803:-1
so has part: feature:1748800-1748803:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679465:-1:exon
so has part: feature:1677754-1677773:-1:exon

XP_031300400.1
type: Protein
SIO_000068: ncbiprotein

position:1677754:-1
position: 1677754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1677754-1677773:-1:exon

BEND7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X5
translation: MDYHHEVYKVSEFSSDVNGEAKETQPIFLGDESMEIKKQITGMRRLLNDSTGRTYQRVGKEGEKLKEEPQDLGSVWPPRLNSAEAPQSLHPPSRGAWNELPPQSGHFSGQYGTRSRTFQSQPHAAGSANGELPAMNPSVGPSCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKRNKKKKVAPKTAEPLTVKQKPGVLESEKKTALAPENPSLPATEHTPSGENHILGFGIIVESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNGKRKRGLNDNRKGLDQNIVGAIKVFTEKYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSAEAADGDERLDGVSLPPTVLLFYR
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1677754..1677773,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748803))
location: region:1677754-1748803:-1
so has part: feature:1748800-1748803:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1677754-1677773:-1:exon

XP_031300395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1677754-1677773:-1:exon

BEND7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X3
translation: MGDESMEIKKQITGMRRLLNDSTGRTYQRVGKEGEKLKEEPQDLGSVWPPRLNSAEAPQSLHPPSRGAWNELPPQSGHFSGQYGTRSRTFQSQPHAAGSANGELPAMNPSVGPSCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKRNKKKKVAPKTAEPLTVKQKPGVLESEKKTALAPENPSLPATEHTPSGENHILGFGIIVESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNGKRKRGLNDNRKGLDQNIVGAIKVFTEKYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSAEAADGDERLDGVSLPPTVYHGWTSVNSGATRKPSRVNTVLSLPLSSSTADRRTSK
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1678370..1678485,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1748800..1748803))
location: region:1678370-1748803:-1
so has part: feature:1748800-1748803:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1678370-1678485:-1:exon

XP_031300393.1
type: Protein
SIO_000068: ncbiprotein

position:1678370:-1
position: 1678370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1678370-1678485:-1:exon

BEND7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X2
translation: MDYHHEVYKVSEFSSDVNGEAKETQPIFLGDESMEIKKQITGMRRLLNDSTGRTYQRVGKEGEKLKEEPQDLGSVWPPRLNSAEAPQSLHPPSRGAWNELPPQSGHFSGQYGTRSRTFQSQPHAAGSANGELPAMNPSVGPSCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKRNKKKKVAPKTAEPLTVKQKPGVLESEKKTALAPENPSLPATEHTPSGENHILGFGIIVESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNGKRKRGLNDNRKGLDQNIVGAIKVFTEKYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSEAADGDERLDGVSLPPTVYHGWTSVNSGATRKPSRVNTVLSLPLSSSTADRRTSK
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1678370..1678485,1679415..1679465,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748803))
location: region:1678370-1748803:-1
so has part: feature:1748800-1748803:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679465:-1:exon
so has part: feature:1678370-1678485:-1:exon

XP_031300392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1678370-1678485:-1:exon

BEND7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X1
translation: MDYHHEVYKVSEFSSDVNGEAKETQPIFLGDESMEIKKQITGMRRLLNDSTGRTYQRVGKEGEKLKEEPQDLGSVWPPRLNSAEAPQSLHPPSRGAWNELPPQSGHFSGQYGTRSRTFQSQPHAAGSANGELPAMNPSVGPSCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKRNKKKKVAPKTAEPLTVKQKPGVLESEKKTALAPENPSLPATEHTPSGENHILGFGIIVESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNGKRKRGLNDNRKGLDQNIVGAIKVFTEKYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSAEAADGDERLDGVSLPPTVYHGWTSVNSGATRKPSRVNTVLSLPLSSSTADRRTSK
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1678370..1678485,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748803))
location: region:1678370-1748803:-1
so has part: feature:1748800-1748803:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1678370-1678485:-1:exon

XP_031300391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1678370-1678485:-1:exon

BEND7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X6
translation: MEIKKQITGMRRLLNDSTGRTYQRVGKEGEKLKEEPQDLGSVWPPRLNSAEAPQSLHPPSRGAWNELPPQSGHFSGQYGTRSRTFQSQPHAAGSANGELPAMNPSVGPSCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKRNKKKKVAPKTAEPLTVKQKPGVLESEKKTALAPENPSLPATEHTPSGENHILGFGIIVESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNGKRKRGLNDNRKGLDQNIVGAIKVFTEKYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSAEAADGDERLDGVSLPPTVYHGWTSVNSGATRKPSRVNTVLSLPLSSSTADRRTSK
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1678370..1678485,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724097))
location: region:1678370-1724097:-1
so has part: feature:1723809-1724097:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1678370-1678485:-1:exon

XP_031300397.1
type: Protein
SIO_000068: ncbiprotein

position:1724097:-1
position: 1724097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1723809-1724097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1678370-1678485:-1:exon

BEND7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X6
translation: MEIKKQITGMRRLLNDSTGRTYQRVGKEGEKLKEEPQDLGSVWPPRLNSAEAPQSLHPPSRGAWNELPPQSGHFSGQYGTRSRTFQSQPHAAGSANGELPAMNPSVGPSCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKRNKKKKVAPKTAEPLTVKQKPGVLESEKKTALAPENPSLPATEHTPSGENHILGFGIIVESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNGKRKRGLNDNRKGLDQNIVGAIKVFTEKYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSAEAADGDERLDGVSLPPTVYHGWTSVNSGATRKPSRVNTVLSLPLSSSTADRRTSK
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1678370..1678485,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724097))
location: region:1678370-1724097:-1
so has part: feature:1723809-1724097:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1678370-1678485:-1:exon

XP_031300398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1723809-1724097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1678370-1678485:-1:exon

BEND7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X6
translation: MEIKKQITGMRRLLNDSTGRTYQRVGKEGEKLKEEPQDLGSVWPPRLNSAEAPQSLHPPSRGAWNELPPQSGHFSGQYGTRSRTFQSQPHAAGSANGELPAMNPSVGPSCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKRNKKKKVAPKTAEPLTVKQKPGVLESEKKTALAPENPSLPATEHTPSGENHILGFGIIVESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNGKRKRGLNDNRKGLDQNIVGAIKVFTEKYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSAEAADGDERLDGVSLPPTVYHGWTSVNSGATRKPSRVNTVLSLPLSSSTADRRTSK
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1678370..1678485,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724097))
location: region:1678370-1724097:-1
so has part: feature:1723809-1724097:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1678370-1678485:-1:exon

XP_031300399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1723809-1724097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1678370-1678485:-1:exon

BEND7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X6
translation: MEIKKQITGMRRLLNDSTGRTYQRVGKEGEKLKEEPQDLGSVWPPRLNSAEAPQSLHPPSRGAWNELPPQSGHFSGQYGTRSRTFQSQPHAAGSANGELPAMNPSVGPSCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKRNKKKKVAPKTAEPLTVKQKPGVLESEKKTALAPENPSLPATEHTPSGENHILGFGIIVESPSSDPEVQLAEGFDVFMPKSQLDSILSNYTRSGSLLFRKLVCAFFDDKTLANSLPNGKRKRGLNDNRKGLDQNIVGAIKVFTEKYCTANHVDKLPGPRDWVQILQDQIKLARRRLKRGSAEAADGDERLDGVSLPPTVYHGWTSVNSGATRKPSRVNTVLSLPLSSSTADRRTSK
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1678370..1678485,1679415..1679468,1687206..1687325,1706653..1706878,1717245..1717510,1720971..1721093,1723809..1724097))
location: region:1678370-1724097:-1
so has part: feature:1723809-1724097:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706878:-1:exon
so has part: feature:1687206-1687325:-1:exon
so has part: feature:1679415-1679468:-1:exon
so has part: feature:1678370-1678485:-1:exon

XP_031300403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1723809-1724097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1706653-1706878:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1687206-1687325:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1679415-1679468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1678370-1678485:-1:exon

BEND7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031444544.1
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1687206..1687325,1706653..1706874,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748956))
location: region:1687206-1748956:-1
so has part: feature:1748800-1748956:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706653-1706874:-1:exon
so has part: feature:1687206-1687325:-1:exon

position:1748956:-1
position: 1748956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706653-1706874:-1:exon

position:1706874:-1
position: 1706874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1687206-1687325:-1:exon

BEND7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BEND7
product: BEN domain containing 7, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031444545.1
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1704118..1706874,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748958))
location: region:1704118-1748958:-1
so has part: feature:1748800-1748958:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1704118-1706874:-1:exon

position:1704118:-1
position: 1704118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1704118-1706874:-1:exon

BEND7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X10
translation: MDYHHEVYKVSEFSSDVNGEAKETQPIFLGDESMEIKKQITGMRRLLNDSTGRTYQRVGKEGEKLKEEPQDLGSVWPPRLNSAEAPQSLHPPSRGAWNELPPQSGHFSGQYGTRSRTFQSQPHAAGSANGELPAMNPSVGPSCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKRNKKKKVAPKTAEPLTVKQKPGVLESEKKTALAPENPSLPATEHTPSGENHILGFGIIVESPSSDKCSLLKASTCSCLNLSWTQYCQTTLAQGAFCLENWCVRFLMTRLWLTPYPMGRGKEDSMTTGKD
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1706680..1706874,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748803))
location: region:1706680-1748803:-1
so has part: feature:1748800-1748803:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706680-1706874:-1:exon

XP_031300404.1
type: Protein
SIO_000068: ncbiprotein

position:1706680:-1
position: 1706680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706680-1706874:-1:exon

BEND7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BEND7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BEN domain-containing protein 7 isoform X10
translation: MDYHHEVYKVSEFSSDVNGEAKETQPIFLGDESMEIKKQITGMRRLLNDSTGRTYQRVGKEGEKLKEEPQDLGSVWPPRLNSAEAPQSLHPPSRGAWNELPPQSGHFSGQYGTRSRTFQSQPHAAGSANGELPAMNPSVGPSCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKRNKKKKVAPKTAEPLTVKQKPGVLESEKKTALAPENPSLPATEHTPSGENHILGFGIIVESPSSDKCSLLKASTCSCLNLSWTQYCQTTLAQGAFCLENWCVRFLMTRLWLTPYPMGRGKEDSMTTGKD
SIO_010081: BEND7
subclass of: SO_0000673
so part of: BEND7
location: complement(join(1706680..1706874,1717245..1717510,1720971..1721093,1723809..1724108,1745400..1745483,1748800..1748803))
location: region:1706680-1748803:-1
so has part: feature:1748800-1748803:-1:exon
so has part: feature:1745400-1745483:-1:exon
so has part: feature:1723809-1724108:-1:exon
so has part: feature:1720971-1721093:-1:exon
so has part: feature:1717245-1717510:-1:exon
so has part: feature:1706680-1706874:-1:exon

XP_031300405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748800-1748803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745400-1745483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723809-1724108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1720971-1721093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1717245-1717510:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1706680-1706874:-1:exon

LOC116150491
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150491
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1752510..1760926
location: region:1752510-1760926:1
so has part: feature:1752510-1760926:1:exon
subclass of: SO_0000011

116150491
type: Gene
SIO_000068: ncbigene

position:1752510:1
position: 1752510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1760926:1
position: 1760926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1752510-1760926:1:exon

LOC116150491
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150491
product: uncharacterized LOC116150491
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004134213.1
SIO_010081: LOC116150491
subclass of: SO_0000673
so part of: LOC116150491
location: join(1752510..1752700,1757801..1758020,1760676..1760926)
location: region:1752510-1760926:1
so has part: feature:1752510-1752700:1:exon
so has part: feature:1757801-1758020:1:exon
so has part: feature:1760676-1760926:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1752510-1752700:1:exon

position:1752700:1
position: 1752700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1757801-1758020:1:exon

position:1757801:1
position: 1757801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1758020:1
position: 1758020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1760676-1760926:1:exon

position:1760676:1
position: 1760676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRPF18
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: PRPF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1777216..1817611
location: region:1777216-1817611:1
so has part: feature:1777216-1817611:1:exon
subclass of: SO_0000010

105100615
type: Gene
SIO_000068: ncbigene

position:1777216:1
position: 1777216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1817611:1
position: 1817611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777216-1817611:1:exon

PRPF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PRPF18
product: pre-mRNA processing factor 18, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_031444549.1
SIO_010081: PRPF18
subclass of: SO_0000673
so part of: PRPF18
location: join(1777216..1777427,1787497..1787574,1787690..1787716,1790277..1790381,1792254..1792367,1798382..1798528,1800236..1800304,1801721..1801861,1804250..1804405,1816854..1817611)
location: region:1777216-1817611:1
so has part: feature:1777216-1777427:1:exon
so has part: feature:1787497-1787574:1:exon
so has part: feature:1787690-1787716:1:exon
so has part: feature:1790277-1790381:1:exon
so has part: feature:1792254-1792367:1:exon
so has part: feature:1798382-1798528:1:exon
so has part: feature:1800236-1800304:1:exon
so has part: feature:1801721-1801861:1:exon
so has part: feature:1804250-1804405:1:exon
so has part: feature:1816854-1817611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1777216-1777427:1:exon

position:1777427:1
position: 1777427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1787497-1787574:1:exon

position:1787497:1
position: 1787497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1787574:1
position: 1787574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1787690-1787716:1:exon

position:1787690:1
position: 1787690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1787716:1
position: 1787716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1790277-1790381:1:exon

position:1790277:1
position: 1790277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1790381:1
position: 1790381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1792254-1792367:1:exon

position:1792254:1
position: 1792254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1792367:1
position: 1792367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1798382-1798528:1:exon

position:1798382:1
position: 1798382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1798528:1
position: 1798528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1800236-1800304:1:exon

position:1800236:1
position: 1800236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1800304:1
position: 1800304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1801721-1801861:1:exon

position:1801721:1
position: 1801721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1801861:1
position: 1801861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1804250-1804405:1:exon

position:1804250:1
position: 1804250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1804405:1
position: 1804405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1816854-1817611:1:exon

position:1816854:1
position: 1816854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRPF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PRPF18
product: pre-mRNA processing factor 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_031444547.1
SIO_010081: PRPF18
subclass of: SO_0000673
so part of: PRPF18
location: join(1777217..1777427,1787497..1787574,1787690..1787716,1790277..1790381,1792254..1792367,1798382..1798528,1800236..1800304,1801721..1801861,1801993..1802064,1804250..1804405,1816854..1817611)
location: region:1777217-1817611:1
so has part: feature:1777217-1777427:1:exon
so has part: feature:1787497-1787574:1:exon
so has part: feature:1787690-1787716:1:exon
so has part: feature:1790277-1790381:1:exon
so has part: feature:1792254-1792367:1:exon
so has part: feature:1798382-1798528:1:exon
so has part: feature:1800236-1800304:1:exon
so has part: feature:1801721-1801861:1:exon
so has part: feature:1801993-1802064:1:exon
so has part: feature:1804250-1804405:1:exon
so has part: feature:1816854-1817611:1:exon

position:1777217:1
position: 1777217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777217-1777427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1787497-1787574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1787690-1787716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1790277-1790381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1792254-1792367:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798382-1798528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1800236-1800304:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1801721-1801861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1801993-1802064:1:exon

position:1801993:1
position: 1801993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1802064:1
position: 1802064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1804250-1804405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816854-1817611:1:exon

PRPF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PRPF18
product: pre-mRNA processing factor 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_031444548.1
SIO_010081: PRPF18
subclass of: SO_0000673
so part of: PRPF18
location: join(1777220..1777427,1787497..1787574,1790277..1790381,1792254..1792367,1798382..1798528,1800236..1800304,1801721..1801861,1801993..1802064,1804250..1804405,1816854..1817611)
location: region:1777220-1817611:1
so has part: feature:1777220-1777427:1:exon
so has part: feature:1787497-1787574:1:exon
so has part: feature:1790277-1790381:1:exon
so has part: feature:1792254-1792367:1:exon
so has part: feature:1798382-1798528:1:exon
so has part: feature:1800236-1800304:1:exon
so has part: feature:1801721-1801861:1:exon
so has part: feature:1801993-1802064:1:exon
so has part: feature:1804250-1804405:1:exon
so has part: feature:1816854-1817611:1:exon

position:1777220:1
position: 1777220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777220-1777427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1787497-1787574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1790277-1790381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1792254-1792367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798382-1798528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1800236-1800304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1801721-1801861:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1801993-1802064:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1804250-1804405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816854-1817611:1:exon

PRPF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PRPF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor 18 isoform X1
translation: MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGCKPINEKPSGEIQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNELVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL
SIO_010081: PRPF18
subclass of: SO_0000673
so part of: PRPF18
location: join(1777362..1777427,1787497..1787574,1787690..1787716,1790277..1790381,1792254..1792367,1798382..1798528,1800236..1800304,1801721..1801861,1801993..1802064,1804250..1804405,1816854..1816934)
location: region:1777362-1816934:1
so has part: feature:1777362-1777427:1:exon
so has part: feature:1787497-1787574:1:exon
so has part: feature:1787690-1787716:1:exon
so has part: feature:1790277-1790381:1:exon
so has part: feature:1792254-1792367:1:exon
so has part: feature:1798382-1798528:1:exon
so has part: feature:1800236-1800304:1:exon
so has part: feature:1801721-1801861:1:exon
so has part: feature:1801993-1802064:1:exon
so has part: feature:1804250-1804405:1:exon
so has part: feature:1816854-1816934:1:exon

XP_031300407.1
type: Protein
SIO_000068: ncbiprotein

position:1777362:1
position: 1777362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1816934:1
position: 1816934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777362-1777427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1787497-1787574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1787690-1787716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1790277-1790381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1792254-1792367:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798382-1798528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1800236-1800304:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1801721-1801861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1801993-1802064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1804250-1804405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1816854-1816934:1:exon

PRPF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PRPF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor 18 isoform X3
translation: MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGCKPINEKPSGEIQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNELVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL
SIO_010081: PRPF18
subclass of: SO_0000673
so part of: PRPF18
location: join(1777362..1777427,1787497..1787574,1787690..1787716,1790277..1790381,1792254..1792367,1798382..1798528,1800236..1800304,1801721..1801861,1804250..1804405,1816854..1816934)
location: region:1777362-1816934:1
so has part: feature:1777362-1777427:1:exon
so has part: feature:1787497-1787574:1:exon
so has part: feature:1787690-1787716:1:exon
so has part: feature:1790277-1790381:1:exon
so has part: feature:1792254-1792367:1:exon
so has part: feature:1798382-1798528:1:exon
so has part: feature:1800236-1800304:1:exon
so has part: feature:1801721-1801861:1:exon
so has part: feature:1804250-1804405:1:exon
so has part: feature:1816854-1816934:1:exon

XP_031300409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1777362-1777427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1787497-1787574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1787690-1787716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1790277-1790381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1792254-1792367:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798382-1798528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1800236-1800304:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1801721-1801861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1804250-1804405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816854-1816934:1:exon

PRPF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PRPF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor 18 isoform X2
translation: MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGCKIQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNELVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL
SIO_010081: PRPF18
subclass of: SO_0000673
so part of: PRPF18
location: join(1777362..1777427,1787497..1787574,1790277..1790381,1792254..1792367,1798382..1798528,1800236..1800304,1801721..1801861,1801993..1802064,1804250..1804405,1816854..1816934)
location: region:1777362-1816934:1
so has part: feature:1777362-1777427:1:exon
so has part: feature:1787497-1787574:1:exon
so has part: feature:1790277-1790381:1:exon
so has part: feature:1792254-1792367:1:exon
so has part: feature:1798382-1798528:1:exon
so has part: feature:1800236-1800304:1:exon
so has part: feature:1801721-1801861:1:exon
so has part: feature:1801993-1802064:1:exon
so has part: feature:1804250-1804405:1:exon
so has part: feature:1816854-1816934:1:exon

XP_031300408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1777362-1777427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1787497-1787574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1790277-1790381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1792254-1792367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1798382-1798528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1800236-1800304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1801721-1801861:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1801993-1802064:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1804250-1804405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1816854-1816934:1:exon

FRMD4A
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: FRMD4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1823305..2099512)
location: region:1823305-2099512:-1
so has part: feature:1823305-2099512:-1:exon
subclass of: SO_0000010

105100613
type: Gene
SIO_000068: ncbigene

position:1823305:-1
position: 1823305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2099512:-1
position: 2099512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1823305-2099512:-1:exon

FRMD4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FRMD4A
product: FERM domain containing 4A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 8 bases in 5 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031444546.1
SIO_010081: FRMD4A
subclass of: SO_0000673
so part of: FRMD4A
location: complement(join(1823305..1826556,1835670..1835741,1838074..1838170,1839604..1840384,1842240..1842407,1843217..1843454,1846370..1846426,1848786..1849014,1852095..1852217,1856010..1856143,1871059..1871200,1876226..1876364,1881758..1881834,1903722..1903808,1907597..1907654,1907915..1907980,1913011..1913094,1924404..1924426,1925371..1925427,1938401..1938485,1948702..1948794,1960347..1960441,2006950..2007015,2098788..2099512))
location: region:1823305-2099512:-1
so has part: feature:2098788-2099512:-1:exon
so has part: feature:2006950-2007015:-1:exon
so has part: feature:1960347-1960441:-1:exon
so has part: feature:1948702-1948794:-1:exon
so has part: feature:1938401-1938485:-1:exon
so has part: feature:1925371-1925427:-1:exon
so has part: feature:1924404-1924426:-1:exon
so has part: feature:1913011-1913094:-1:exon
so has part: feature:1907915-1907980:-1:exon
so has part: feature:1907597-1907654:-1:exon
so has part: feature:1903722-1903808:-1:exon
so has part: feature:1881758-1881834:-1:exon
so has part: feature:1876226-1876364:-1:exon
so has part: feature:1871059-1871200:-1:exon
so has part: feature:1856010-1856143:-1:exon
so has part: feature:1852095-1852217:-1:exon
so has part: feature:1848786-1849014:-1:exon
so has part: feature:1846370-1846426:-1:exon
so has part: feature:1843217-1843454:-1:exon
so has part: feature:1842240-1842407:-1:exon
so has part: feature:1839604-1840384:-1:exon
so has part: feature:1838074-1838170:-1:exon
so has part: feature:1835670-1835741:-1:exon
so has part: feature:1823305-1826556:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2098788-2099512:-1:exon

position:2098788:-1
position: 2098788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2006950-2007015:-1:exon

position:2006950:-1
position: 2006950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2007015:-1
position: 2007015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1960347-1960441:-1:exon

position:1960347:-1
position: 1960347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1960441:-1
position: 1960441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1948702-1948794:-1:exon

position:1948702:-1
position: 1948702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1948794:-1
position: 1948794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1938401-1938485:-1:exon

position:1938401:-1
position: 1938401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1938485:-1
position: 1938485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1925371-1925427:-1:exon

position:1925371:-1
position: 1925371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1925427:-1
position: 1925427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1924404-1924426:-1:exon

position:1924404:-1
position: 1924404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1924426:-1
position: 1924426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1913011-1913094:-1:exon

position:1913011:-1
position: 1913011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1913094:-1
position: 1913094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1907915-1907980:-1:exon

position:1907915:-1
position: 1907915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1907980:-1
position: 1907980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1907597-1907654:-1:exon

position:1907597:-1
position: 1907597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1907654:-1
position: 1907654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1903722-1903808:-1:exon

position:1903722:-1
position: 1903722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1903808:-1
position: 1903808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1881758-1881834:-1:exon

position:1881758:-1
position: 1881758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1881834:-1
position: 1881834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1876226-1876364:-1:exon

position:1876226:-1
position: 1876226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1876364:-1
position: 1876364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1871059-1871200:-1:exon

position:1871059:-1
position: 1871059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1871200:-1
position: 1871200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1856010-1856143:-1:exon

position:1856010:-1
position: 1856010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856143:-1
position: 1856143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1852095-1852217:-1:exon

position:1852095:-1
position: 1852095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1852217:-1
position: 1852217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1848786-1849014:-1:exon

position:1848786:-1
position: 1848786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1849014:-1
position: 1849014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1846370-1846426:-1:exon

position:1846370:-1
position: 1846370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1846426:-1
position: 1846426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1843217-1843454:-1:exon

position:1843217:-1
position: 1843217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1843454:-1
position: 1843454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1842240-1842407:-1:exon

position:1842240:-1
position: 1842240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1842407:-1
position: 1842407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1839604-1840384:-1:exon

position:1839604:-1
position: 1839604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1840384:-1
position: 1840384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1838074-1838170:-1:exon

position:1838074:-1
position: 1838074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1838170:-1
position: 1838170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1835670-1835741:-1:exon

position:1835670:-1
position: 1835670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1835741:-1
position: 1835741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1823305-1826556:-1:exon

position:1826556:-1
position: 1826556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FRMD4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FRMD4A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 8 bases in 5 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: FERM domain-containing protein 4A
translation: MAAGPLGSEDLLSSWDRLAWRLTRRALRTCRGGNLRGLQLVLKPWCISRAVYQMTEGRRCQVHLLDDRKLELLVQPKLLAKELLDLVASHFNLKEKEYFGIAFTDETGHLNWLQLDRRVLEHDFPKKSGPVVLYFCVRFYIESISYLKDNATIELFFLNAKSCIYKELIDVDSEVVFELASYILQEAKGDFSSNEVVRTDLKKLPALPTQALKEHPSLAYCEDRVIEHYKKLNGQTRGQAIVNYMSIVESLPTYGVHYYAVKDKQGIPWWLGLSYKGIFQYDYHDKVKPRKIFQWRQLENLYFREKKFSVEVHDPRRASVTRRTFGHSGIAVHTWYACPALIKSIWAMAISQHQFYLDRKQSKSKIHAARSLSEIAIDLTETGTLKTSKLANMGSKGKIISGSSGSLLSSGSQESDSSQSAKKDMLAALKSRQEALEETLRQRLEELKKLCLREAELTGKLPVEYPLDPGEEPPIVRRRIGTAFKLDEQKILPKGEEAELERLEREFAIQSQITEAARRLASDPNVSKKLKKQRKTSYLNALKKLQEIESAINENRIKSGKKPTQRASLIMDDGNIASEDSSLSDALVLEDEDSQVTSTLSPLQSPHKGLPPRPPSHNRPPPPQSLEGLRQTHYHRNDYDKSPIKPKMWSESSLDEPYEKVKKRSSHSHSSSHKRFPSTGSCAEAGGGSSSLQNSPIRSLPHWNSQSSMPSTPDLRVRSPHYVHSTRSVDLSPTRLHSLALHFRHRSSSLESQGKLLGSENDTGSPDFYTPXTRSSNVGHHGDCSSCTSHSSSEHYYPAQMNANYSTLAEDSRARGAPSVGGGAHGGXYLHSQSQPSSQYRIKEYPLYIEGSATPVVVRSLESDQEATTASRRSSRTSNSYTAGGCSARAXRGGDEGDAGRLTPSRSQIADSVAGRGGRHDKGAGRXAVSDELRQWYQRSSASHKDHSRLSHTSSTSXDSGSQYSTSSHSTFVAHSRVTRMPQMCKGTSAALPQSQRSSTPSSEVGATPPSSPHHILTWQTGEATEDSPIMDGSESPAHQSTDE
SIO_010081: FRMD4A
subclass of: SO_0000673
so part of: FRMD4A
location: complement(join(1835672..1835741,1838074..1838170,1839604..1840384,1842240..1842407,1843217..1843454,1846370..1846426,1848786..1849014,1852095..1852217,1856010..1856143,1871059..1871200,1876226..1876364,1881758..1881834,1903722..1903808,1907597..1907654,1907915..1907980,1913011..1913094,1924404..1924426,1925371..1925427,1938401..1938485,1948702..1948794,1960347..1960441,2006950..2007015,2098788..2098946))
location: region:1835672-2098946:-1
so has part: feature:2098788-2098946:-1:exon
so has part: feature:2006950-2007015:-1:exon
so has part: feature:1960347-1960441:-1:exon
so has part: feature:1948702-1948794:-1:exon
so has part: feature:1938401-1938485:-1:exon
so has part: feature:1925371-1925427:-1:exon
so has part: feature:1924404-1924426:-1:exon
so has part: feature:1913011-1913094:-1:exon
so has part: feature:1907915-1907980:-1:exon
so has part: feature:1907597-1907654:-1:exon
so has part: feature:1903722-1903808:-1:exon
so has part: feature:1881758-1881834:-1:exon
so has part: feature:1876226-1876364:-1:exon
so has part: feature:1871059-1871200:-1:exon
so has part: feature:1856010-1856143:-1:exon
so has part: feature:1852095-1852217:-1:exon
so has part: feature:1848786-1849014:-1:exon
so has part: feature:1846370-1846426:-1:exon
so has part: feature:1843217-1843454:-1:exon
so has part: feature:1842240-1842407:-1:exon
so has part: feature:1839604-1840384:-1:exon
so has part: feature:1838074-1838170:-1:exon
so has part: feature:1835672-1835741:-1:exon

XP_031300406.1
type: Protein
SIO_000068: ncbiprotein

position:1835672:-1
position: 1835672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2098946:-1
position: 2098946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2098788-2098946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2006950-2007015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1960347-1960441:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1948702-1948794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1938401-1938485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1925371-1925427:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1924404-1924426:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1913011-1913094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1907915-1907980:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1907597-1907654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1903722-1903808:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1881758-1881834:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1876226-1876364:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1871059-1871200:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1856010-1856143:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1852095-1852217:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1848786-1849014:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1846370-1846426:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1843217-1843454:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1842240-1842407:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1839604-1840384:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1838074-1838170:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1835672-1835741:-1:exon

LOC116150444
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2541490..2561651)
location: region:2541490-2561651:-1
so has part: feature:2541490-2561651:-1:exon
subclass of: SO_0000011

116150444
type: Gene
SIO_000068: ncbigene

position:2541490:-1
position: 2541490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2561651:-1
position: 2561651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2541490-2561651:-1:exon

LOC116150444
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150444
product: uncharacterized LOC116150444
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004134178.1
SIO_010081: LOC116150444
subclass of: SO_0000673
so part of: LOC116150444
location: complement(join(2541490..2541670,2542232..2542277,2561552..2561651))
location: region:2541490-2561651:-1
so has part: feature:2561552-2561651:-1:exon
so has part: feature:2542232-2542277:-1:exon
so has part: feature:2541490-2541670:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2561552-2561651:-1:exon

position:2561552:-1
position: 2561552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2542232-2542277:-1:exon

position:2542232:-1
position: 2542232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2542277:-1
position: 2542277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2541490-2541670:-1:exon

position:2541670:-1
position: 2541670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB18
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: RAB18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2643782..2679073
location: region:2643782-2679073:1
so has part: feature:2643782-2679073:1:exon
subclass of: SO_0000010

105100612
type: Gene
SIO_000068: ncbigene

position:2643782:1
position: 2643782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2679073:1
position: 2679073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2643782-2679073:1:exon

RAB18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RAB18
product: RAB18, member RAS oncogene family, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_010993634.2
SIO_010081: RAB18
subclass of: SO_0000673
so part of: RAB18
location: join(2643782..2644030,2648335..2648390,2668489..2668550,2672476..2672548,2673758..2673876,2673951..2674017,2677091..2679073)
location: region:2643782-2679073:1
so has part: feature:2643782-2644030:1:exon
so has part: feature:2648335-2648390:1:exon
so has part: feature:2668489-2668550:1:exon
so has part: feature:2672476-2672548:1:exon
so has part: feature:2673758-2673876:1:exon
so has part: feature:2673951-2674017:1:exon
so has part: feature:2677091-2679073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2643782-2644030:1:exon

position:2644030:1
position: 2644030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2648335-2648390:1:exon

position:2648335:1
position: 2648335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2648390:1
position: 2648390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2668489-2668550:1:exon

position:2668489:1
position: 2668489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2668550:1
position: 2668550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2672476-2672548:1:exon

position:2672476:1
position: 2672476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2672548:1
position: 2672548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2673758-2673876:1:exon

position:2673758:1
position: 2673758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2673876:1
position: 2673876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2673951-2674017:1:exon

position:2673951:1
position: 2673951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2674017:1
position: 2674017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2677091-2679073:1:exon

position:2677091:1
position: 2677091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RAB18
product: RAB18, member RAS oncogene family, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_031444551.1
SIO_010081: RAB18
subclass of: SO_0000673
so part of: RAB18
location: join(2643900..2644030,2668489..2668550,2671666..2671778,2672476..2672548,2673758..2673876,2673951..2674017,2677091..2679073)
location: region:2643900-2679073:1
so has part: feature:2643900-2644030:1:exon
so has part: feature:2668489-2668550:1:exon
so has part: feature:2671666-2671778:1:exon
so has part: feature:2672476-2672548:1:exon
so has part: feature:2673758-2673876:1:exon
so has part: feature:2673951-2674017:1:exon
so has part: feature:2677091-2679073:1:exon

position:2643900:1
position: 2643900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2643900-2644030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2668489-2668550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2671666-2671778:1:exon

position:2671666:1
position: 2671666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2671778:1
position: 2671778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2672476-2672548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2673758-2673876:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2673951-2674017:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2677091-2679073:1:exon

RAB18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RAB18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-18 isoform X1
translation: MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGMKLTHREEGQGGGACGGYCSVL
SIO_010081: RAB18
subclass of: SO_0000673
so part of: RAB18
location: join(2643963..2644030,2648335..2648390,2668489..2668550,2672476..2672548,2673758..2673876,2673951..2674017,2677091..2677266)
location: region:2643963-2677266:1
so has part: feature:2643963-2644030:1:exon
so has part: feature:2648335-2648390:1:exon
so has part: feature:2668489-2668550:1:exon
so has part: feature:2672476-2672548:1:exon
so has part: feature:2673758-2673876:1:exon
so has part: feature:2673951-2674017:1:exon
so has part: feature:2677091-2677266:1:exon

XP_010991936.1
type: Protein
SIO_000068: ncbiprotein

position:2643963:1
position: 2643963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2677266:1
position: 2677266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2643963-2644030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2648335-2648390:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2668489-2668550:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2672476-2672548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2673758-2673876:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2673951-2674017:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2677091-2677266:1:exon

RAB18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RAB18
product: RAB18, member RAS oncogene family, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_031444550.1
SIO_010081: RAB18
subclass of: SO_0000673
so part of: RAB18
location: join(2648335..2648390,2668489..2668550,2671666..2671778,2672476..2672548,2673758..2673876,2673951..2674017,2677091..2679073)
location: region:2648335-2679073:1
so has part: feature:2648335-2648390:1:exon
so has part: feature:2668489-2668550:1:exon
so has part: feature:2671666-2671778:1:exon
so has part: feature:2672476-2672548:1:exon
so has part: feature:2673758-2673876:1:exon
so has part: feature:2673951-2674017:1:exon
so has part: feature:2677091-2679073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2648335-2648390:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2668489-2668550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2671666-2671778:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2672476-2672548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2673758-2673876:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2673951-2674017:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2677091-2679073:1:exon

LOC116150492
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2656930..2661472
location: region:2656930-2661472:1
so has part: feature:2656930-2661472:1:exon

116150492
type: Gene
SIO_000068: ncbigene

position:2656930:1
position: 2656930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2661472:1
position: 2661472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2656930-2661472:1:exon

LOC116150492
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150492
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116150492
subclass of: SO_0000673
so part of: LOC116150492
location: 2656930..2661472
location: region:2656930-2661472:1
so has part: feature:2656930-2661472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2656930-2661472:1:exon

RAB18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RAB18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-18 isoform X2
translation: MGTLKAQSKDGRKKTEGTRPRGDLLIRLFFSTKVEHLSKDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGMKLTHREEGQGGGACGGYCSVL
SIO_010081: RAB18
subclass of: SO_0000673
so part of: RAB18
location: join(2668547..2668550,2671666..2671778,2672476..2672548,2673758..2673876,2673951..2674017,2677091..2677266)
location: region:2668547-2677266:1
so has part: feature:2668547-2668550:1:exon
so has part: feature:2671666-2671778:1:exon
so has part: feature:2672476-2672548:1:exon
so has part: feature:2673758-2673876:1:exon
so has part: feature:2673951-2674017:1:exon
so has part: feature:2677091-2677266:1:exon

XP_031300410.1
type: Protein
SIO_000068: ncbiprotein

position:2668547:1
position: 2668547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2668547-2668550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2671666-2671778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2672476-2672548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2673758-2673876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2673951-2674017:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2677091-2677266:1:exon

RAB18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RAB18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-18 isoform X2
translation: MGTLKAQSKDGRKKTEGTRPRGDLLIRLFFSTKVEHLSKDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGMKLTHREEGQGGGACGGYCSVL
SIO_010081: RAB18
subclass of: SO_0000673
so part of: RAB18
location: join(2668547..2668550,2671666..2671778,2672476..2672548,2673758..2673876,2673951..2674017,2677091..2677266)
location: region:2668547-2677266:1
so has part: feature:2668547-2668550:1:exon
so has part: feature:2671666-2671778:1:exon
so has part: feature:2672476-2672548:1:exon
so has part: feature:2673758-2673876:1:exon
so has part: feature:2673951-2674017:1:exon
so has part: feature:2677091-2677266:1:exon

XP_031300411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2668547-2668550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2671666-2671778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2672476-2672548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2673758-2673876:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2673951-2674017:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2677091-2677266:1:exon

MKX
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: MKX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2787755..2848559)
location: region:2787755-2848559:-1
so has part: feature:2787755-2848559:-1:exon
subclass of: SO_0000010

105100611
type: Gene
SIO_000068: ncbigene

position:2787755:-1
position: 2787755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2848559:-1
position: 2848559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2787755-2848559:-1:exon

MKX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MKX
product: mohawk homeobox
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031444552.1
SIO_010081: MKX
subclass of: SO_0000673
so part of: MKX
location: complement(join(2787755..2789810,2789916..2789949,2836391..2836726,2837184..2837337,2844751..2844908,2846559..2846825,2848256..2848559))
location: region:2787755-2848559:-1
so has part: feature:2848256-2848559:-1:exon
so has part: feature:2846559-2846825:-1:exon
so has part: feature:2844751-2844908:-1:exon
so has part: feature:2837184-2837337:-1:exon
so has part: feature:2836391-2836726:-1:exon
so has part: feature:2789916-2789949:-1:exon
so has part: feature:2787755-2789810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2848256-2848559:-1:exon

position:2848256:-1
position: 2848256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2846559-2846825:-1:exon

position:2846559:-1
position: 2846559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2846825:-1
position: 2846825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2844751-2844908:-1:exon

position:2844751:-1
position: 2844751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2844908:-1
position: 2844908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2837184-2837337:-1:exon

position:2837184:-1
position: 2837184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2837337:-1
position: 2837337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2836391-2836726:-1:exon

position:2836391:-1
position: 2836391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2836726:-1
position: 2836726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2789916-2789949:-1:exon

position:2789916:-1
position: 2789916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2789949:-1
position: 2789949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2787755-2789810:-1:exon

position:2789810:-1
position: 2789810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MKX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MKX
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Mohawk
translation: MNTIVFNKLSGAVLFEDRGAPERERGGRPYGGVLDNPHARPEVGIPDGPPLKDNLGLRHRRTGARQNGGKXEAQRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVRQPDLSWALRIKLYNKYVQGNAERLSVSSDDSCSEDGENPPRNHMNEGGYNNPVHHPVIKSESSVIKAGVRPESRANEDYVSPPKYKSSLLNRYLNDSLRHVMVTDAAIMGKTRQRNHSGSFSSNEFEEELVSPSSSETEGNFVYRTDTLENGSNKGDSAANRRGPNKDDTYWREINAAMALTNLAQGKDQLQGTTSCIIQKSSHIAEVKTVKVPLAQQF
SIO_010081: MKX
subclass of: SO_0000673
so part of: MKX
location: complement(join(2789624..2789810,2789916..2789949,2836391..2836726,2837184..2837337,2844751..2844908,2846559..2846746))
location: region:2789624-2846746:-1
so has part: feature:2846559-2846746:-1:exon
so has part: feature:2844751-2844908:-1:exon
so has part: feature:2837184-2837337:-1:exon
so has part: feature:2836391-2836726:-1:exon
so has part: feature:2789916-2789949:-1:exon
so has part: feature:2789624-2789810:-1:exon

XP_031300412.1
type: Protein
SIO_000068: ncbiprotein

position:2789624:-1
position: 2789624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2846746:-1
position: 2846746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2846559-2846746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2844751-2844908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2837184-2837337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2836391-2836726:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2789916-2789949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2789624-2789810:-1:exon

ARMC4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ARMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2906019..3059726)
location: region:2906019-3059726:-1
so has part: feature:2906019-3059726:-1:exon
subclass of: SO_0000010

105100618
type: Gene
SIO_000068: ncbigene

position:2906019:-1
position: 2906019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3059726:-1
position: 3059726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2906019-3059726:-1:exon

ARMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ARMC4
product: armadillo repeat containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031444553.1
SIO_010081: ARMC4
subclass of: SO_0000673
so part of: ARMC4
location: complement(join(2906019..2906560,2913069..2913145,2964744..2964965,2966197..2966385,2989687..2989801,3002441..3002683,3003694..3003848,3007959..3008069,3008798..3009040,3012903..3013112,3013517..3013663,3029116..3029263,3031293..3031388,3032769..3032974,3044722..3044838,3047391..3047527,3047708..3047814,3048444..3048645,3049890..3050047,3055408..3056196))
location: region:2906019-3056196:-1
so has part: feature:3055408-3056196:-1:exon
so has part: feature:3049890-3050047:-1:exon
so has part: feature:3048444-3048645:-1:exon
so has part: feature:3047708-3047814:-1:exon
so has part: feature:3047391-3047527:-1:exon
so has part: feature:3044722-3044838:-1:exon
so has part: feature:3032769-3032974:-1:exon
so has part: feature:3031293-3031388:-1:exon
so has part: feature:3029116-3029263:-1:exon
so has part: feature:3013517-3013663:-1:exon
so has part: feature:3012903-3013112:-1:exon
so has part: feature:3008798-3009040:-1:exon
so has part: feature:3007959-3008069:-1:exon
so has part: feature:3003694-3003848:-1:exon
so has part: feature:3002441-3002683:-1:exon
so has part: feature:2989687-2989801:-1:exon
so has part: feature:2966197-2966385:-1:exon
so has part: feature:2964744-2964965:-1:exon
so has part: feature:2913069-2913145:-1:exon
so has part: feature:2906019-2906560:-1:exon

position:3056196:-1
position: 3056196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055408-3056196:-1:exon

position:3055408:-1
position: 3055408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3049890-3050047:-1:exon

position:3049890:-1
position: 3049890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3050047:-1
position: 3050047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3048444-3048645:-1:exon

position:3048444:-1
position: 3048444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3048645:-1
position: 3048645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3047708-3047814:-1:exon

position:3047708:-1
position: 3047708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3047814:-1
position: 3047814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3047391-3047527:-1:exon

position:3047391:-1
position: 3047391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3047527:-1
position: 3047527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3044722-3044838:-1:exon

position:3044722:-1
position: 3044722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3044838:-1
position: 3044838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3032769-3032974:-1:exon

position:3032769:-1
position: 3032769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3032974:-1
position: 3032974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3031293-3031388:-1:exon

position:3031293:-1
position: 3031293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3031388:-1
position: 3031388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3029116-3029263:-1:exon

position:3029116:-1
position: 3029116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3029263:-1
position: 3029263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3013517-3013663:-1:exon

position:3013517:-1
position: 3013517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3013663:-1
position: 3013663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3012903-3013112:-1:exon

position:3012903:-1
position: 3012903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3013112:-1
position: 3013112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3008798-3009040:-1:exon

position:3008798:-1
position: 3008798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3009040:-1
position: 3009040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3007959-3008069:-1:exon

position:3007959:-1
position: 3007959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3008069:-1
position: 3008069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3003694-3003848:-1:exon

position:3003694:-1
position: 3003694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3003848:-1
position: 3003848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3002441-3002683:-1:exon

position:3002441:-1
position: 3002441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3002683:-1
position: 3002683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2989687-2989801:-1:exon

position:2989687:-1
position: 2989687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2989801:-1
position: 2989801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2966197-2966385:-1:exon

position:2966197:-1
position: 2966197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2966385:-1
position: 2966385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2964744-2964965:-1:exon

position:2964744:-1
position: 2964744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2964965:-1
position: 2964965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2913069-2913145:-1:exon

position:2913069:-1
position: 2913069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2913145:-1
position: 2913145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2906019-2906560:-1:exon

position:2906560:-1
position: 2906560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ARMC4
product: armadillo repeat containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031444555.1
SIO_010081: ARMC4
subclass of: SO_0000673
so part of: ARMC4
location: complement(join(2906020..2906560,2913069..2913145,2964744..2964965,2966197..2966385,2989687..2989801,3002441..3002683,3003694..3003848,3007959..3008069,3008798..3009040,3012903..3013112,3013517..3013663,3029116..3029263,3031293..3031388,3032769..3032974,3044722..3044838,3047391..3047527,3047708..3047814,3048444..3048645,3049890..3050047,3055408..3055667,3059609..3059726))
location: region:2906020-3059726:-1
so has part: feature:3059609-3059726:-1:exon
so has part: feature:3055408-3055667:-1:exon
so has part: feature:3049890-3050047:-1:exon
so has part: feature:3048444-3048645:-1:exon
so has part: feature:3047708-3047814:-1:exon
so has part: feature:3047391-3047527:-1:exon
so has part: feature:3044722-3044838:-1:exon
so has part: feature:3032769-3032974:-1:exon
so has part: feature:3031293-3031388:-1:exon
so has part: feature:3029116-3029263:-1:exon
so has part: feature:3013517-3013663:-1:exon
so has part: feature:3012903-3013112:-1:exon
so has part: feature:3008798-3009040:-1:exon
so has part: feature:3007959-3008069:-1:exon
so has part: feature:3003694-3003848:-1:exon
so has part: feature:3002441-3002683:-1:exon
so has part: feature:2989687-2989801:-1:exon
so has part: feature:2966197-2966385:-1:exon
so has part: feature:2964744-2964965:-1:exon
so has part: feature:2913069-2913145:-1:exon
so has part: feature:2906020-2906560:-1:exon

position:2906020:-1
position: 2906020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3059609-3059726:-1:exon

position:3059609:-1
position: 3059609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3055408-3055667:-1:exon

position:3055667:-1
position: 3055667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3049890-3050047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3048444-3048645:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3047708-3047814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3047391-3047527:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3044722-3044838:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3032769-3032974:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3031293-3031388:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3029116-3029263:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3013517-3013663:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3012903-3013112:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3008798-3009040:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3007959-3008069:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3003694-3003848:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3002441-3002683:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2989687-2989801:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2966197-2966385:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2964744-2964965:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2913069-2913145:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2906020-2906560:-1:exon

ARMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ARMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 4 isoform X1
translation: MKSVLVGRGMLVLPLTGSALIQCVLSSDLNVKDPMGVALTRSMQWSAAGHGTRTLEVTPLNEAVLTEIVMFVESFIYKHPQEAKYVFVEPLEWKTNLDPSAFGSGYIVSETTVNSEDVDKNGQPLLFLSVPQIKIRSFGQLSRFLFIAKSTKLKEAQACIEANRNPVAKILGLDYKVIDEISEDSSVLSILDKITKDDDPASETKMKIAMLLKQLDLHLLNHTLKHISLEIRLNPGTFKNDIELLKRFSGKGKQTVLEFIDYTSDYEFSNGCRAPPWRQLRGEICYVLVKPHDAEILCVTCSKEGVFLNGGKTDDEEEVNYERTGEIYKDLVTLLREKSAIFSENMSKQKVRVNEGQQKEKDQPDETPRKREDATLRKASTASHRSALESSRINLGKKQMTKRLEPSLNWKSSVDAKGKRSSVRDTQGGKHGGRLEKPRPSILPGIAQFRKSVQKVEDIISDSASESEEDEEPSERRKEANADLPSEYWQIQKLVKYLKRGNQTATVIALCSMKDFKLAQETCQLAIRNVGGLEVLINLLETDEVKCQIGSLQILKEISHNPQIRRNIVELGGLPVMVNILDSPFKCLKCLAAETIANVAKFRRARRAVRRHGGITKLVALLDHEQNATEPAYSSLYETEDVELARCGALALWSCSKSNGNKEAIRKTGGIHLLAQLLKTSHENMLIPVVGTLQECASEENCRAAIKAERIIENLVKNLNSENEQLQEHCAMAIYQCAEDEETRHLMRQHGGLKPLASLLSETDNKERLAAVTGAIWKCSISKENATKFRKYKAIETLVGLLTDQPEEVLVNVVGALGECCQEQENRVIIRKCGGIQPLVKLLVGTNQALLVNVTKAVGACAVEPESMMIIDSLDGVRLLWSLLKNPHPEVKASAAWALCPCIQNAKDAGEMVRSFIGGLELVVSLLKSDNREVLASVCAAITNIAKDQENLAIITDYGIVPLLSKIANTTNDKLRQHLAEAISRCCMWGRNREAFGEHRAVGLLVRYLKSNDTNVHRTTAQALYQLSEDADNCITMHENGAVKLLLDMIGSSDHDLQEAAAGCISNIRRKGACSHEMNSTSVLLYHEPPHTPLEPAVQQKHKTSHCLI
SIO_010081: ARMC4
subclass of: SO_0000673
so part of: ARMC4
location: complement(join(2906440..2906560,2913069..2913145,2964744..2964965,2966197..2966385,2989687..2989801,3002441..3002683,3003694..3003848,3007959..3008069,3008798..3009040,3012903..3013112,3013517..3013663,3029116..3029263,3031293..3031388,3032769..3032974,3044722..3044838,3047391..3047527,3047708..3047814,3048444..3048645,3049890..3050047,3055408..3055733))
location: region:2906440-3055733:-1
so has part: feature:3055408-3055733:-1:exon
so has part: feature:3049890-3050047:-1:exon
so has part: feature:3048444-3048645:-1:exon
so has part: feature:3047708-3047814:-1:exon
so has part: feature:3047391-3047527:-1:exon
so has part: feature:3044722-3044838:-1:exon
so has part: feature:3032769-3032974:-1:exon
so has part: feature:3031293-3031388:-1:exon
so has part: feature:3029116-3029263:-1:exon
so has part: feature:3013517-3013663:-1:exon
so has part: feature:3012903-3013112:-1:exon
so has part: feature:3008798-3009040:-1:exon
so has part: feature:3007959-3008069:-1:exon
so has part: feature:3003694-3003848:-1:exon
so has part: feature:3002441-3002683:-1:exon
so has part: feature:2989687-2989801:-1:exon
so has part: feature:2966197-2966385:-1:exon
so has part: feature:2964744-2964965:-1:exon
so has part: feature:2913069-2913145:-1:exon
so has part: feature:2906440-2906560:-1:exon

XP_031300413.1
type: Protein
SIO_000068: ncbiprotein

position:2906440:-1
position: 2906440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3055733:-1
position: 3055733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055408-3055733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3049890-3050047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3048444-3048645:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3047708-3047814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3047391-3047527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3044722-3044838:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3032769-3032974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3031293-3031388:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3029116-3029263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3013517-3013663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3012903-3013112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3008798-3009040:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3007959-3008069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3003694-3003848:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3002441-3002683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2989687-2989801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2966197-2966385:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2964744-2964965:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2913069-2913145:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2906440-2906560:-1:exon

ARMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ARMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 4 isoform X3
translation: MGVALTRSMQWSAAGHGTRTLEVTPLNEAVLTEIVMFVESFIYKHPQEAKYVFVEPLEWKTNLDPSAFGSGYIVSETTVNSEDVDKNGQPLLFLSVPQIKIRSFGQLSRFLFIAKSTKLKEAQACIEANRNPVAKILGLDYKVIDEISEDSSVLSILDKITKDDDPASETKMKIAMLLKQLDLHLLNHTLKHISLEIRLNPGTFKNDIELLKRFSGKGKQTVLEFIDYTSDYEFSNGCRAPPWRQLRGEICYVLVKPHDAEILCVTCSKEGVFLNGGKTDDEEEVNYERTGEIYKDLVTLLREKSAIFSENMSKQKVRVNEGQQKEKDQPDETPRKREDATLRKASTASHRSALESSRINLGKKQMTKRLEPSLNWKSSVDAKGKRSSVRDTQGGKHGGRLEKPRPSILPGIAQFRKSVQKVEDIISDSASESEEDEEPSERRKEANADLPSEYWQIQKLVKYLKRGNQTATVIALCSMKDFKLAQETCQLAIRNVGGLEVLINLLETDEVKCQIGSLQILKEISHNPQIRRNIVELGGLPVMVNILDSPFKCLKCLAAETIANVAKFRRARRAVRRHGGITKLVALLDHEQNATEPAYSSLYETEDVELARCGALALWSCSKSNGNKEAIRKTGGIHLLAQLLKTSHENMLIPVVGTLQECASEENCRAAIKAERIIENLVKNLNSENEQLQEHCAMAIYQCAEDEETRHLMRQHGGLKPLASLLSETDNKERLAAVTGAIWKCSISKENATKFRKYKAIETLVGLLTDQPEEVLVNVVGALGECCQEQENRVIIRKCGGIQPLVKLLVGTNQALLVNVTKAVGACAVEPESMMIIDSLDGVRLLWSLLKNPHPEVKASAAWALCPCIQNAKDAGEMVRSFIGGLELVVSLLKSDNREVLASVCAAITNIAKDQENLAIITDYGIVPLLSKIANTTNDKLRQHLAEAISRCCMWGRNREAFGEHRAVGLLVRYLKSNDTNVHRTTAQALYQLSEDADNCITMHENGAVKLLLDMIGSSDHDLQEAAAGCISNIRRKGACSHEMNSTSVLLYHEPPHTPLEPAVQQKHKTSHCLI
SIO_010081: ARMC4
subclass of: SO_0000673
so part of: ARMC4
location: complement(join(2906440..2906560,2913069..2913145,2964744..2964965,2966197..2966385,2989687..2989801,3002441..3002683,3003694..3003848,3007959..3008069,3008798..3009040,3012903..3013112,3013517..3013663,3029116..3029263,3031293..3031388,3032769..3032974,3044722..3044838,3047391..3047527,3047708..3047814,3048444..3048645,3049890..3050047,3055408..3055631))
location: region:2906440-3055631:-1
so has part: feature:3055408-3055631:-1:exon
so has part: feature:3049890-3050047:-1:exon
so has part: feature:3048444-3048645:-1:exon
so has part: feature:3047708-3047814:-1:exon
so has part: feature:3047391-3047527:-1:exon
so has part: feature:3044722-3044838:-1:exon
so has part: feature:3032769-3032974:-1:exon
so has part: feature:3031293-3031388:-1:exon
so has part: feature:3029116-3029263:-1:exon
so has part: feature:3013517-3013663:-1:exon
so has part: feature:3012903-3013112:-1:exon
so has part: feature:3008798-3009040:-1:exon
so has part: feature:3007959-3008069:-1:exon
so has part: feature:3003694-3003848:-1:exon
so has part: feature:3002441-3002683:-1:exon
so has part: feature:2989687-2989801:-1:exon
so has part: feature:2966197-2966385:-1:exon
so has part: feature:2964744-2964965:-1:exon
so has part: feature:2913069-2913145:-1:exon
so has part: feature:2906440-2906560:-1:exon

XP_031300415.1
type: Protein
SIO_000068: ncbiprotein

position:3055631:-1
position: 3055631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055408-3055631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3049890-3050047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3048444-3048645:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3047708-3047814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3047391-3047527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3044722-3044838:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3032769-3032974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3031293-3031388:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3029116-3029263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3013517-3013663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3012903-3013112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3008798-3009040:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3007959-3008069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3003694-3003848:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3002441-3002683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2989687-2989801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2966197-2966385:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2964744-2964965:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2913069-2913145:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2906440-2906560:-1:exon

ARMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ARMC4
product: armadillo repeat containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031444554.1
SIO_010081: ARMC4
subclass of: SO_0000673
so part of: ARMC4
location: complement(join(2912460..2913145,2964744..2964965,2966197..2966385,2989687..2989801,3002441..3002683,3003694..3003848,3007959..3008069,3008798..3009040,3012903..3013112,3013517..3013663,3029116..3029263,3031293..3031388,3032769..3032974,3044722..3044838,3047391..3047527,3047708..3047814,3048444..3048645,3049890..3050047,3055408..3056195))
location: region:2912460-3056195:-1
so has part: feature:3055408-3056195:-1:exon
so has part: feature:3049890-3050047:-1:exon
so has part: feature:3048444-3048645:-1:exon
so has part: feature:3047708-3047814:-1:exon
so has part: feature:3047391-3047527:-1:exon
so has part: feature:3044722-3044838:-1:exon
so has part: feature:3032769-3032974:-1:exon
so has part: feature:3031293-3031388:-1:exon
so has part: feature:3029116-3029263:-1:exon
so has part: feature:3013517-3013663:-1:exon
so has part: feature:3012903-3013112:-1:exon
so has part: feature:3008798-3009040:-1:exon
so has part: feature:3007959-3008069:-1:exon
so has part: feature:3003694-3003848:-1:exon
so has part: feature:3002441-3002683:-1:exon
so has part: feature:2989687-2989801:-1:exon
so has part: feature:2966197-2966385:-1:exon
so has part: feature:2964744-2964965:-1:exon
so has part: feature:2912460-2913145:-1:exon

position:2912460:-1
position: 2912460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3056195:-1
position: 3056195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055408-3056195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3049890-3050047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3048444-3048645:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3047708-3047814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3047391-3047527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3044722-3044838:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3032769-3032974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3031293-3031388:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3029116-3029263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3013517-3013663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3012903-3013112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3008798-3009040:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3007959-3008069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3003694-3003848:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3002441-3002683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2989687-2989801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2966197-2966385:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2964744-2964965:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2912460-2913145:-1:exon

ARMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ARMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 4 isoform X2
translation: MKSVLVGRGMLVLPLTGSALIQCVLSSDLNVKDPMGVALTRSMQWSAAGHGTRTLEVTPLNEAVLTEIVMFVESFIYKHPQEAKYVFVEPLEWKTNLDPSAFGSGYIVSETTVNSEDVDKNGQPLLFLSVPQIKIRSFGQLSRFLFIAKSTKLKEAQACIEANRNPVAKILGLDYKVIDEISEDSSVLSILDKITKDDDPASETKMKIAMLLKQLDLHLLNHTLKHISLEIRLNPGTFKNDIELLKRFSGKGKQTVLEFIDYTSDYEFSNGCRAPPWRQLRGEICYVLVKPHDAEILCVTCSKEGVFLNGGKTDDEEEVNYERTGEIYKDLVTLLREKSAIFSENMSKQKVRVNEGQQKEKDQPDETPRKREDATLRKASTASHRSALESSRINLGKKQMTKRLEPSLNWKSSVDAKGKRSSVRDTQGGKHGGRLEKPRPSILPGIAQFRKSVQKVEDIISDSASESEEDEEPSERRKEANADLPSEYWQIQKLVKYLKRGNQTATVIALCSMKDFKLAQETCQLAIRNVGGLEVLINLLETDEVKCQIGSLQILKEISHNPQIRRNIVELGGLPVMVNILDSPFKCLKCLAAETIANVAKFRRARRAVRRHGGITKLVALLDHEQNATEPAYSSLYETEDVELARCGALALWSCSKSNGNKEAIRKTGGIHLLAQLLKTSHENMLIPVVGTLQECASEENCRAAIKAERIIENLVKNLNSENEQLQEHCAMAIYQCAEDEETRHLMRQHGGLKPLASLLSETDNKERLAAVTGAIWKCSISKENATKFRKYKAIETLVGLLTDQPEEVLVNVVGALGECCQEQENRVIIRKCGGIQPLVKLLVGTNQALLVNVTKAVGACAVEPESMMIIDSLDGVRLLWSLLKNPHPEVKASAAWALCPCIQNAKDAGEMVRSFIGGLELVVSLLKSDNREVLASVCAAITNIAKDQENLAIITDYGIVPLLSKIANTTNDKLRQHLAEAISRCCMWGRNREAFGEHRAVGLLVRYLKSNDTNVHRTTAQALYQLSEDADNCITMHENGAVKLLLDMIGSSDHDLQEAAAGCISNIRRLALAIDKARYTYNSNRHYKLPSITQHRTCHSHAQEP
SIO_010081: ARMC4
subclass of: SO_0000673
so part of: ARMC4
location: complement(join(2912957..2913145,2964744..2964965,2966197..2966385,2989687..2989801,3002441..3002683,3003694..3003848,3007959..3008069,3008798..3009040,3012903..3013112,3013517..3013663,3029116..3029263,3031293..3031388,3032769..3032974,3044722..3044838,3047391..3047527,3047708..3047814,3048444..3048645,3049890..3050047,3055408..3055733))
location: region:2912957-3055733:-1
so has part: feature:3055408-3055733:-1:exon
so has part: feature:3049890-3050047:-1:exon
so has part: feature:3048444-3048645:-1:exon
so has part: feature:3047708-3047814:-1:exon
so has part: feature:3047391-3047527:-1:exon
so has part: feature:3044722-3044838:-1:exon
so has part: feature:3032769-3032974:-1:exon
so has part: feature:3031293-3031388:-1:exon
so has part: feature:3029116-3029263:-1:exon
so has part: feature:3013517-3013663:-1:exon
so has part: feature:3012903-3013112:-1:exon
so has part: feature:3008798-3009040:-1:exon
so has part: feature:3007959-3008069:-1:exon
so has part: feature:3003694-3003848:-1:exon
so has part: feature:3002441-3002683:-1:exon
so has part: feature:2989687-2989801:-1:exon
so has part: feature:2966197-2966385:-1:exon
so has part: feature:2964744-2964965:-1:exon
so has part: feature:2912957-2913145:-1:exon

XP_031300414.1
type: Protein
SIO_000068: ncbiprotein

position:2912957:-1
position: 2912957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055408-3055733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3049890-3050047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3048444-3048645:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3047708-3047814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3047391-3047527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3044722-3044838:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3032769-3032974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3031293-3031388:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3029116-3029263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3013517-3013663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3012903-3013112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3008798-3009040:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3007959-3008069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3003694-3003848:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3002441-3002683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2989687-2989801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2966197-2966385:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2964744-2964965:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2912957-2913145:-1:exon

LOC105100610
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105100610
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2949918..2951078)
location: region:2949918-2951078:-1
so has part: feature:2949918-2951078:-1:exon

105100610
type: Gene
SIO_000068: ncbigene

position:2949918:-1
position: 2949918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2951078:-1
position: 2951078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2949918-2951078:-1:exon

LOC105100610
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105100610
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105100610
subclass of: SO_0000673
so part of: LOC105100610
location: complement(2949918..2951078)
location: region:2949918-2951078:-1
so has part: feature:2949918-2951078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2949918-2951078:-1:exon

ARMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ARMC4
product: armadillo repeat containing 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031444556.1
SIO_010081: ARMC4
subclass of: SO_0000673
so part of: ARMC4
location: complement(join(2951361..2951828,2964744..2964965,2966197..2966385,2989687..2989801,3002441..3002683,3003694..3003848,3007959..3008069,3008798..3009040,3012903..3013112,3013517..3013663,3029116..3029263,3031293..3031388,3032769..3032974,3044722..3044838,3047391..3047527,3047708..3047814,3048444..3048645,3049890..3050047,3055408..3056194))
location: region:2951361-3056194:-1
so has part: feature:3055408-3056194:-1:exon
so has part: feature:3049890-3050047:-1:exon
so has part: feature:3048444-3048645:-1:exon
so has part: feature:3047708-3047814:-1:exon
so has part: feature:3047391-3047527:-1:exon
so has part: feature:3044722-3044838:-1:exon
so has part: feature:3032769-3032974:-1:exon
so has part: feature:3031293-3031388:-1:exon
so has part: feature:3029116-3029263:-1:exon
so has part: feature:3013517-3013663:-1:exon
so has part: feature:3012903-3013112:-1:exon
so has part: feature:3008798-3009040:-1:exon
so has part: feature:3007959-3008069:-1:exon
so has part: feature:3003694-3003848:-1:exon
so has part: feature:3002441-3002683:-1:exon
so has part: feature:2989687-2989801:-1:exon
so has part: feature:2966197-2966385:-1:exon
so has part: feature:2964744-2964965:-1:exon
so has part: feature:2951361-2951828:-1:exon

position:2951361:-1
position: 2951361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3056194:-1
position: 3056194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055408-3056194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3049890-3050047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3048444-3048645:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3047708-3047814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3047391-3047527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3044722-3044838:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3032769-3032974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3031293-3031388:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3029116-3029263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3013517-3013663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3012903-3013112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3008798-3009040:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3007959-3008069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3003694-3003848:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3002441-3002683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2989687-2989801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2966197-2966385:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2964744-2964965:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2951361-2951828:-1:exon

position:2951828:-1
position: 2951828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ARMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 4 isoform X4
translation: MKSVLVGRGMLVLPLTGSALIQCVLSSDLNVKDPMGVALTRSMQWSAAGHGTRTLEVTPLNEAVLTEIVMFVESFIYKHPQEAKYVFVEPLEWKTNLDPSAFGSGYIVSETTVNSEDVDKNGQPLLFLSVPQIKIRSFGQLSRFLFIAKSTKLKEAQACIEANRNPVAKILGLDYKVIDEISEDSSVLSILDKITKDDDPASETKMKIAMLLKQLDLHLLNHTLKHISLEIRLNPGTFKNDIELLKRFSGKGKQTVLEFIDYTSDYEFSNGCRAPPWRQLRGEICYVLVKPHDAEILCVTCSKEGVFLNGGKTDDEEEVNYERTGEIYKDLVTLLREKSAIFSENMSKQKVRVNEGQQKEKDQPDETPRKREDATLRKASTASHRSALESSRINLGKKQMTKRLEPSLNWKSSVDAKGKRSSVRDTQGGKHGGRLEKPRPSILPGIAQFRKSVQKVEDIISDSASESEEDEEPSERRKEANADLPSEYWQIQKLVKYLKRGNQTATVIALCSMKDFKLAQETCQLAIRNVGGLEVLINLLETDEVKCQIGSLQILKEISHNPQIRRNIVELGGLPVMVNILDSPFKCLKCLAAETIANVAKFRRARRAVRRHGGITKLVALLDHEQNATEPAYSSLYETEDVELARCGALALWSCSKSNGNKEAIRKTGGIHLLAQLLKTSHENMLIPVVGTLQECASEENCRAAIKAERIIENLVKNLNSENEQLQEHCAMAIYQCAEDEETRHLMRQHGGLKPLASLLSETDNKERLAAVTGAIWKCSISKENATKFRKYKAIETLVGLLTDQPEEVLVNVVGALGECCQEQENRVIIRKCGGIQPLVKLLVGTNQALLVNVTKAVGACAVEPESMMIIDSLDGVRLLWSLLKNPHPEVKASAAWALCPCIQNAKDAGEMVRSFIGGLELVVSLLKSDNREVLASVCAAITNIAKDQENLAIITDYGIVPLLSKIANTTNDKLRQHLAEAISRCCMWGRNREAFGEHRAVGLLVRYLKSNDTNVHRTTAQALYQLSEDADNCITMHENGAVK
SIO_010081: ARMC4
subclass of: SO_0000673
so part of: ARMC4
location: complement(join(2951826..2951828,2964744..2964965,2966197..2966385,2989687..2989801,3002441..3002683,3003694..3003848,3007959..3008069,3008798..3009040,3012903..3013112,3013517..3013663,3029116..3029263,3031293..3031388,3032769..3032974,3044722..3044838,3047391..3047527,3047708..3047814,3048444..3048645,3049890..3050047,3055408..3055733))
location: region:2951826-3055733:-1
so has part: feature:3055408-3055733:-1:exon
so has part: feature:3049890-3050047:-1:exon
so has part: feature:3048444-3048645:-1:exon
so has part: feature:3047708-3047814:-1:exon
so has part: feature:3047391-3047527:-1:exon
so has part: feature:3044722-3044838:-1:exon
so has part: feature:3032769-3032974:-1:exon
so has part: feature:3031293-3031388:-1:exon
so has part: feature:3029116-3029263:-1:exon
so has part: feature:3013517-3013663:-1:exon
so has part: feature:3012903-3013112:-1:exon
so has part: feature:3008798-3009040:-1:exon
so has part: feature:3007959-3008069:-1:exon
so has part: feature:3003694-3003848:-1:exon
so has part: feature:3002441-3002683:-1:exon
so has part: feature:2989687-2989801:-1:exon
so has part: feature:2966197-2966385:-1:exon
so has part: feature:2964744-2964965:-1:exon
so has part: feature:2951826-2951828:-1:exon

XP_031300416.1
type: Protein
SIO_000068: ncbiprotein

position:2951826:-1
position: 2951826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055408-3055733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3049890-3050047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3048444-3048645:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3047708-3047814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3047391-3047527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3044722-3044838:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3032769-3032974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3031293-3031388:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3029116-3029263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3013517-3013663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3012903-3013112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3008798-3009040:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3007959-3008069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3003694-3003848:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3002441-3002683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2989687-2989801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2966197-2966385:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2964744-2964965:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2951826-2951828:-1:exon

ARMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ARMC4
product: armadillo repeat containing 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031444557.1
SIO_010081: ARMC4
subclass of: SO_0000673
so part of: ARMC4
location: complement(join(2999750..3000432,3002441..3002683,3003694..3003848,3007959..3008069,3008798..3009040,3012903..3013112,3013517..3013663,3029116..3029263,3031293..3031388,3032769..3032974,3044722..3044838,3047391..3047527,3047708..3047814,3048444..3048645,3049890..3050047,3055408..3056194))
location: region:2999750-3056194:-1
so has part: feature:3055408-3056194:-1:exon
so has part: feature:3049890-3050047:-1:exon
so has part: feature:3048444-3048645:-1:exon
so has part: feature:3047708-3047814:-1:exon
so has part: feature:3047391-3047527:-1:exon
so has part: feature:3044722-3044838:-1:exon
so has part: feature:3032769-3032974:-1:exon
so has part: feature:3031293-3031388:-1:exon
so has part: feature:3029116-3029263:-1:exon
so has part: feature:3013517-3013663:-1:exon
so has part: feature:3012903-3013112:-1:exon
so has part: feature:3008798-3009040:-1:exon
so has part: feature:3007959-3008069:-1:exon
so has part: feature:3003694-3003848:-1:exon
so has part: feature:3002441-3002683:-1:exon
so has part: feature:2999750-3000432:-1:exon

position:2999750:-1
position: 2999750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055408-3056194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3049890-3050047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3048444-3048645:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3047708-3047814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3047391-3047527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3044722-3044838:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3032769-3032974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3031293-3031388:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3029116-3029263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3013517-3013663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3012903-3013112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3008798-3009040:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3007959-3008069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3003694-3003848:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3002441-3002683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2999750-3000432:-1:exon

position:3000432:-1
position: 3000432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ARMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 4 isoform X5
translation: MKSVLVGRGMLVLPLTGSALIQCVLSSDLNVKDPMGVALTRSMQWSAAGHGTRTLEVTPLNEAVLTEIVMFVESFIYKHPQEAKYVFVEPLEWKTNLDPSAFGSGYIVSETTVNSEDVDKNGQPLLFLSVPQIKIRSFGQLSRFLFIAKSTKLKEAQACIEANRNPVAKILGLDYKVIDEISEDSSVLSILDKITKDDDPASETKMKIAMLLKQLDLHLLNHTLKHISLEIRLNPGTFKNDIELLKRFSGKGKQTVLEFIDYTSDYEFSNGCRAPPWRQLRGEICYVLVKPHDAEILCVTCSKEGVFLNGGKTDDEEEVNYERTGEIYKDLVTLLREKSAIFSENMSKQKVRVNEGQQKEKDQPDETPRKREDATLRKASTASHRSALESSRINLGKKQMTKRLEPSLNWKSSVDAKGKRSSVRDTQGGKHGGRLEKPRPSILPGIAQFRKSVQKVEDIISDSASESEEDEEPSERRKEANADLPSEYWQIQKLVKYLKRGNQTATVIALCSMKDFKLAQETCQLAIRNVGGLEVLINLLETDEVKCQIGSLQILKEISHNPQIRRNIVELGGLPVMVNILDSPFKCLKCLAAETIANVAKFRRARRAVRRHGGITKLVALLDHEQNATEPAYSSLYETEDVELARCGALALWSCSKSNGNKEAIRKTGGIHLLAQLLKTSHENMLIPVVGTLQECASEENCRAAIKAERIIENLVKNLNSENEQLQEHCAMAIYQCAEDEETRHLMRQHGGLKPLASLLSETDNKERLAAVTGAIWKCSISKENATKFRKYKAIETLVGLLTDQPEEVLVNVVGALGECCQEQENRVIIRKCGGIQPLVKLLVGTNQALLVNVTKAVGACAVEPESMMENDWTREEVPGKKLRGTARES
SIO_010081: ARMC4
subclass of: SO_0000673
so part of: ARMC4
location: complement(join(3000366..3000432,3002441..3002683,3003694..3003848,3007959..3008069,3008798..3009040,3012903..3013112,3013517..3013663,3029116..3029263,3031293..3031388,3032769..3032974,3044722..3044838,3047391..3047527,3047708..3047814,3048444..3048645,3049890..3050047,3055408..3055733))
location: region:3000366-3055733:-1
so has part: feature:3055408-3055733:-1:exon
so has part: feature:3049890-3050047:-1:exon
so has part: feature:3048444-3048645:-1:exon
so has part: feature:3047708-3047814:-1:exon
so has part: feature:3047391-3047527:-1:exon
so has part: feature:3044722-3044838:-1:exon
so has part: feature:3032769-3032974:-1:exon
so has part: feature:3031293-3031388:-1:exon
so has part: feature:3029116-3029263:-1:exon
so has part: feature:3013517-3013663:-1:exon
so has part: feature:3012903-3013112:-1:exon
so has part: feature:3008798-3009040:-1:exon
so has part: feature:3007959-3008069:-1:exon
so has part: feature:3003694-3003848:-1:exon
so has part: feature:3002441-3002683:-1:exon
so has part: feature:3000366-3000432:-1:exon

XP_031300417.1
type: Protein
SIO_000068: ncbiprotein

position:3000366:-1
position: 3000366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055408-3055733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3049890-3050047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3048444-3048645:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3047708-3047814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3047391-3047527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3044722-3044838:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3032769-3032974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3031293-3031388:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3029116-3029263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3013517-3013663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3012903-3013112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3008798-3009040:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3007959-3008069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3003694-3003848:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3002441-3002683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3000366-3000432:-1:exon

LOC116150607
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150607
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3143209..3143315)
location: region:3143209-3143315:-1
so has part: feature:3143209-3143315:-1:exon
subclass of: SO_0000623

116150607
type: Gene
SIO_000068: ncbigene

position:3143209:-1
position: 3143209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3143315:-1
position: 3143315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3143209-3143315:-1:exon

LOC116150607
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snRNA
gene: LOC116150607
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004134339.1
SIO_010081: LOC116150607
subclass of: SO_0000673
so part of: LOC116150607
location: complement(3143209..3143315)
location: region:3143209-3143315:-1
so has part: feature:3143209-3143315:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3143209-3143315:-1:exon

LOC105101458
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105101458
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3170997..3171916
location: region:3170997-3171916:1
so has part: feature:3170997-3171916:1:exon
subclass of: SO_0000010

105101458
type: Gene
SIO_000068: ncbigene

position:3170997:1
position: 3170997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3171916:1
position: 3171916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3170997-3171916:1:exon

LOC105101458
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105101458
product: CPX chromosomal region candidate gene 1 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031444482.1
SIO_010081: LOC105101458
subclass of: SO_0000673
so part of: LOC105101458
location: join(3170997..3171357,3171415..3171916)
location: region:3170997-3171916:1
so has part: feature:3170997-3171357:1:exon
so has part: feature:3171415-3171916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3170997-3171357:1:exon

position:3171357:1
position: 3171357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3171415-3171916:1:exon

position:3171415:1
position: 3171415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105101458
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105101458
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CPX chromosomal region candidate gene 1 protein-like
translation: MASPTKEGSDPADSALKILENGAPNDCSTDIEPSFADSIMISQVESHPASREQDTPTCQGHAVPQAAENNKLSVEKLQKDSQKEGVKRGSLFIQIPTPRKWILLIYPLTKGARLGSGEVEVETSDFCHHAVNYRVSLQFSISWRIPFINSHEIRMALRLLCRRHFWRAAGRQNTVWVKPKYTAFLPHPNVLTHGERTTIFGRPLNSYHCCPLAESLTSGKFSESTDAKGKDGVHILVRPVFCVPQARIQNTFHRKALGVSLQREGCDYKHQ
SIO_010081: LOC105101458
subclass of: SO_0000673
so part of: LOC105101458
location: join(3171044..3171357,3171415..3171916)
location: region:3171044-3171916:1
so has part: feature:3171044-3171357:1:exon
so has part: feature:3171415-3171916:1:exon

XP_031300342.1
type: Protein
SIO_000068: ncbiprotein

position:3171044:1
position: 3171044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3171044-3171357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3171415-3171916:1:exon

MPP7
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: MPP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3199346..3421977)
location: region:3199346-3421977:-1
so has part: feature:3199346-3421977:-1:exon
subclass of: SO_0000010

105101454
type: Gene
SIO_000068: ncbigene

position:3199346:-1
position: 3199346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3421977:-1
position: 3421977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3199346-3421977:-1:exon

MPP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MPP7
product: membrane palmitoylated protein 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_031444561.1
SIO_010081: MPP7
subclass of: SO_0000673
so part of: MPP7
location: complement(join(3199346..3202297,3203917..3204060,3205223..3205331,3206372..3206465,3215451..3215531,3236991..3237161,3262926..3262990,3263464..3263660,3263870..3263944,3267079..3267164,3267978..3268059,3280381..3280512,3291351..3291431,3293758..3293835,3362081..3362242,3421782..3421977))
location: region:3199346-3421977:-1
so has part: feature:3421782-3421977:-1:exon
so has part: feature:3362081-3362242:-1:exon
so has part: feature:3293758-3293835:-1:exon
so has part: feature:3291351-3291431:-1:exon
so has part: feature:3280381-3280512:-1:exon
so has part: feature:3267978-3268059:-1:exon
so has part: feature:3267079-3267164:-1:exon
so has part: feature:3263870-3263944:-1:exon
so has part: feature:3263464-3263660:-1:exon
so has part: feature:3262926-3262990:-1:exon
so has part: feature:3236991-3237161:-1:exon
so has part: feature:3215451-3215531:-1:exon
so has part: feature:3206372-3206465:-1:exon
so has part: feature:3205223-3205331:-1:exon
so has part: feature:3203917-3204060:-1:exon
so has part: feature:3199346-3202297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3421782-3421977:-1:exon

position:3421782:-1
position: 3421782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3362081-3362242:-1:exon

position:3362081:-1
position: 3362081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3362242:-1
position: 3362242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3293758-3293835:-1:exon

position:3293758:-1
position: 3293758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3293835:-1
position: 3293835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3291351-3291431:-1:exon

position:3291351:-1
position: 3291351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3291431:-1
position: 3291431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3280381-3280512:-1:exon

position:3280381:-1
position: 3280381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3280512:-1
position: 3280512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3267978-3268059:-1:exon

position:3267978:-1
position: 3267978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3268059:-1
position: 3268059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3267079-3267164:-1:exon

position:3267079:-1
position: 3267079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3267164:-1
position: 3267164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3263870-3263944:-1:exon

position:3263870:-1
position: 3263870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263944:-1
position: 3263944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3263464-3263660:-1:exon

position:3263464:-1
position: 3263464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263660:-1
position: 3263660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3262926-3262990:-1:exon

position:3262926:-1
position: 3262926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3262990:-1
position: 3262990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3236991-3237161:-1:exon

position:3236991:-1
position: 3236991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3237161:-1
position: 3237161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3215451-3215531:-1:exon

position:3215451:-1
position: 3215451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3215531:-1
position: 3215531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3206372-3206465:-1:exon

position:3206372:-1
position: 3206372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3206465:-1
position: 3206465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3205223-3205331:-1:exon

position:3205223:-1
position: 3205223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3205331:-1
position: 3205331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3203917-3204060:-1:exon

position:3203917:-1
position: 3203917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3204060:-1
position: 3204060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3199346-3202297:-1:exon

position:3202297:-1
position: 3202297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MPP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MPP7
product: membrane palmitoylated protein 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_031444560.1
SIO_010081: MPP7
subclass of: SO_0000673
so part of: MPP7
location: complement(join(3199346..3202297,3203917..3204060,3205223..3205331,3206372..3206465,3236991..3237161,3262926..3262990,3263464..3263660,3263870..3263944,3267079..3267164,3267978..3268059,3280381..3280512,3291351..3291431,3293758..3293835,3331779..3331897,3362081..3362240))
location: region:3199346-3362240:-1
so has part: feature:3362081-3362240:-1:exon
so has part: feature:3331779-3331897:-1:exon
so has part: feature:3293758-3293835:-1:exon
so has part: feature:3291351-3291431:-1:exon
so has part: feature:3280381-3280512:-1:exon
so has part: feature:3267978-3268059:-1:exon
so has part: feature:3267079-3267164:-1:exon
so has part: feature:3263870-3263944:-1:exon
so has part: feature:3263464-3263660:-1:exon
so has part: feature:3262926-3262990:-1:exon
so has part: feature:3236991-3237161:-1:exon
so has part: feature:3206372-3206465:-1:exon
so has part: feature:3205223-3205331:-1:exon
so has part: feature:3203917-3204060:-1:exon
so has part: feature:3199346-3202297:-1:exon

position:3362240:-1
position: 3362240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3362081-3362240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3331779-3331897:-1:exon

position:3331779:-1
position: 3331779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3331897:-1
position: 3331897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3293758-3293835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3291351-3291431:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3280381-3280512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3267978-3268059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3267079-3267164:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3263870-3263944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3263464-3263660:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3262926-3262990:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3236991-3237161:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3206372-3206465:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3205223-3205331:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3203917-3204060:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3199346-3202297:-1:exon

MPP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MPP7
product: membrane palmitoylated protein 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_031444559.1
SIO_010081: MPP7
subclass of: SO_0000673
so part of: MPP7
location: complement(join(3199346..3202297,3203917..3204060,3205223..3205331,3206372..3206465,3215451..3215531,3236991..3237161,3262926..3262990,3263464..3263660,3263870..3263944,3267079..3267164,3267978..3268059,3280381..3280512,3291351..3291431,3293758..3293835,3331779..3331897,3362081..3362240))
location: region:3199346-3362240:-1
so has part: feature:3362081-3362240:-1:exon
so has part: feature:3331779-3331897:-1:exon
so has part: feature:3293758-3293835:-1:exon
so has part: feature:3291351-3291431:-1:exon
so has part: feature:3280381-3280512:-1:exon
so has part: feature:3267978-3268059:-1:exon
so has part: feature:3267079-3267164:-1:exon
so has part: feature:3263870-3263944:-1:exon
so has part: feature:3263464-3263660:-1:exon
so has part: feature:3262926-3262990:-1:exon
so has part: feature:3236991-3237161:-1:exon
so has part: feature:3215451-3215531:-1:exon
so has part: feature:3206372-3206465:-1:exon
so has part: feature:3205223-3205331:-1:exon
so has part: feature:3203917-3204060:-1:exon
so has part: feature:3199346-3202297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3362081-3362240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3331779-3331897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3293758-3293835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3291351-3291431:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3280381-3280512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3267978-3268059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3267079-3267164:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3263870-3263944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3263464-3263660:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3262926-3262990:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3236991-3237161:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3215451-3215531:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3206372-3206465:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3205223-3205331:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3203917-3204060:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3199346-3202297:-1:exon

MPP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MPP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAGUK p55 subfamily member 7 isoform X2
translation: MPALATGSGSDTGLYELLAALPAQLQPHVDSQEDLTFLWDMFGAKSLHSLVKIHEKLHYYEKQNPMPILHGAAALADDLAEELQNKPLNGEIRELLRLLSKPNVKALLSVHDTVAQKSYDPVLPPMPDDIDDEEDSVKIIRLVKNREPLGATIKKDEQTGAIVVARIMRGGAADRSGLIHVGDELREVNGIPVEDKKPEEIIQILAQSQGAITFKIIPSIKEETPSKEGKMFIKALFDYDPNEDKAIPCKEAGLAFKKGDILQIMSQDDATWWQAKREGDANPRAGLIPSKHFQERRLALRRPEVLVQPLNVSNRKSFGFRRSFRLSRKDKKTNKSMYECKKSDQYDTADVPTYEEVTPYRRQTHEKYRLVVLVDTTRPRRSQESDGVEYIFISKHLFETDVQNNKFIEYGEYKNNYYGTSIDSVRSVLAKNKVCLLDVQPHTVKHLRTLEFKPYVIFIKPPSIERLRETRKNAKIISSRDDQGAAKPFTEEDFQEMIKSAQIMESQYGHLFDKIIVNDDLTVAFNELKTTFDKLETDTHWVPVSWLHS
SIO_010081: MPP7
subclass of: SO_0000673
so part of: MPP7
location: complement(join(3202118..3202297,3203917..3204060,3205223..3205331,3206372..3206465,3236991..3237161,3262926..3262990,3263464..3263660,3263870..3263944,3267079..3267164,3267978..3268059,3280381..3280512,3291351..3291431,3293758..3293835,3331779..3331897,3362081..3362117))
location: region:3202118-3362117:-1
so has part: feature:3362081-3362117:-1:exon
so has part: feature:3331779-3331897:-1:exon
so has part: feature:3293758-3293835:-1:exon
so has part: feature:3291351-3291431:-1:exon
so has part: feature:3280381-3280512:-1:exon
so has part: feature:3267978-3268059:-1:exon
so has part: feature:3267079-3267164:-1:exon
so has part: feature:3263870-3263944:-1:exon
so has part: feature:3263464-3263660:-1:exon
so has part: feature:3262926-3262990:-1:exon
so has part: feature:3236991-3237161:-1:exon
so has part: feature:3206372-3206465:-1:exon
so has part: feature:3205223-3205331:-1:exon
so has part: feature:3203917-3204060:-1:exon
so has part: feature:3202118-3202297:-1:exon

XP_031300420.1
type: Protein
SIO_000068: ncbiprotein

position:3202118:-1
position: 3202118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3362117:-1
position: 3362117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3362081-3362117:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3331779-3331897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3293758-3293835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3291351-3291431:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3280381-3280512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3267978-3268059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3267079-3267164:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3263870-3263944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3263464-3263660:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3262926-3262990:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3236991-3237161:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3206372-3206465:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3205223-3205331:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3203917-3204060:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3202118-3202297:-1:exon

MPP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MPP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAGUK p55 subfamily member 7 isoform X1
translation: MPALATGSGSDTGLYELLAALPAQLQPHVDSQEDLTFLWDMFGAKSLHSLVKIHEKLHYYEKQNPMPILHGAAALADDLAEELQNKPLNGEIRELLRLLSKPNVKALLSVHDTVAQKSYDPVLPPMPDDIDDEEDSVKIIRLVKNREPLGATIKKDEQTGAIVVARIMRGGAADRSGLIHVGDELREVNGIPVEDKKPEEIIQILAQSQGAITFKIIPSIKEETPSKEGKMFIKALFDYDPNEDKAIPCKEAGLAFKKGDILQIMSQDDATWWQAKREGDANPRAGLIPSKHFQERRLALRRPEVLVQPLNVSNRKSFGFRRSFRLSRKDKKTNKSMYECKKSDQYDTADVPTYEEVTPYRRQTHEKYRLVVLVGPVGVGLNELKRKLLISDTQHYGVTVPHTTRPRRSQESDGVEYIFISKHLFETDVQNNKFIEYGEYKNNYYGTSIDSVRSVLAKNKVCLLDVQPHTVKHLRTLEFKPYVIFIKPPSIERLRETRKNAKIISSRDDQGAAKPFTEEDFQEMIKSAQIMESQYGHLFDKIIVNDDLTVAFNELKTTFDKLETDTHWVPVSWLHS
SIO_010081: MPP7
subclass of: SO_0000673
so part of: MPP7
location: complement(join(3202118..3202297,3203917..3204060,3205223..3205331,3206372..3206465,3215451..3215531,3236991..3237161,3262926..3262990,3263464..3263660,3263870..3263944,3267079..3267164,3267978..3268059,3280381..3280512,3291351..3291431,3293758..3293835,3331779..3331897,3362081..3362117))
location: region:3202118-3362117:-1
so has part: feature:3362081-3362117:-1:exon
so has part: feature:3331779-3331897:-1:exon
so has part: feature:3293758-3293835:-1:exon
so has part: feature:3291351-3291431:-1:exon
so has part: feature:3280381-3280512:-1:exon
so has part: feature:3267978-3268059:-1:exon
so has part: feature:3267079-3267164:-1:exon
so has part: feature:3263870-3263944:-1:exon
so has part: feature:3263464-3263660:-1:exon
so has part: feature:3262926-3262990:-1:exon
so has part: feature:3236991-3237161:-1:exon
so has part: feature:3215451-3215531:-1:exon
so has part: feature:3206372-3206465:-1:exon
so has part: feature:3205223-3205331:-1:exon
so has part: feature:3203917-3204060:-1:exon
so has part: feature:3202118-3202297:-1:exon

XP_031300419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3362081-3362117:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3331779-3331897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3293758-3293835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3291351-3291431:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3280381-3280512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3267978-3268059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3267079-3267164:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3263870-3263944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3263464-3263660:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3262926-3262990:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3236991-3237161:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3215451-3215531:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3206372-3206465:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3205223-3205331:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3203917-3204060:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3202118-3202297:-1:exon

MPP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MPP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAGUK p55 subfamily member 7 isoform X3
translation: MPILHGAAALADDLAEELQNKPLNGEIRELLRLLSKPNVKALLSVHDTVAQKSYDPVLPPMPDDIDDEEDSVKIIRLVKNREPLGATIKKDEQTGAIVVARIMRGGAADRSGLIHVGDELREVNGIPVEDKKPEEIIQILAQSQGAITFKIIPSIKEETPSKEGKMFIKALFDYDPNEDKAIPCKEAGLAFKKGDILQIMSQDDATWWQAKREGDANPRAGLIPSKHFQERRLALRRPEVLVQPLNVSNRKSFGFRRSFRLSRKDKKTNKSMYECKKSDQYDTADVPTYEEVTPYRRQTHEKYRLVVLVGPVGVGLNELKRKLLISDTQHYGVTVPHTTRPRRSQESDGVEYIFISKHLFETDVQNNKFIEYGEYKNNYYGTSIDSVRSVLAKNKVCLLDVQPHTVKHLRTLEFKPYVIFIKPPSIERLRETRKNAKIISSRDDQGAAKPFTEEDFQEMIKSAQIMESQYGHLFDKIIVNDDLTVAFNELKTTFDKLETDTHWVPVSWLHS
SIO_010081: MPP7
subclass of: SO_0000673
so part of: MPP7
location: complement(join(3202118..3202297,3203917..3204060,3205223..3205331,3206372..3206465,3215451..3215531,3236991..3237161,3262926..3262990,3263464..3263660,3263870..3263944,3267079..3267164,3267978..3268059,3280381..3280512,3291351..3291431,3293758..3293796))
location: region:3202118-3293796:-1
so has part: feature:3293758-3293796:-1:exon
so has part: feature:3291351-3291431:-1:exon
so has part: feature:3280381-3280512:-1:exon
so has part: feature:3267978-3268059:-1:exon
so has part: feature:3267079-3267164:-1:exon
so has part: feature:3263870-3263944:-1:exon
so has part: feature:3263464-3263660:-1:exon
so has part: feature:3262926-3262990:-1:exon
so has part: feature:3236991-3237161:-1:exon
so has part: feature:3215451-3215531:-1:exon
so has part: feature:3206372-3206465:-1:exon
so has part: feature:3205223-3205331:-1:exon
so has part: feature:3203917-3204060:-1:exon
so has part: feature:3202118-3202297:-1:exon

XP_031300421.1
type: Protein
SIO_000068: ncbiprotein

position:3293796:-1
position: 3293796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3293758-3293796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3291351-3291431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3280381-3280512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3267978-3268059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3267079-3267164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3263870-3263944:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3263464-3263660:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3262926-3262990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3236991-3237161:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3215451-3215531:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3206372-3206465:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3205223-3205331:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3203917-3204060:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3202118-3202297:-1:exon

LOC105101456
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105101456
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3271489..3272412)
location: region:3271489-3272412:-1
so has part: feature:3271489-3272412:-1:exon

105101456
type: Gene
SIO_000068: ncbigene

position:3271489:-1
position: 3271489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272412:-1
position: 3272412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3271489-3272412:-1:exon

LOC105101456
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105101456
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105101456
subclass of: SO_0000673
so part of: LOC105101456
location: complement(3271489..3272412)
location: region:3271489-3272412:-1
so has part: feature:3271489-3272412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3271489-3272412:-1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3444720..3444791
location: region:3444720-3444791:1
so has part: feature:3444720-3444791:1:exon
subclass of: SO_0000663

116150619
type: Gene
SIO_000068: ncbigene

position:3444720:1
position: 3444720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3444791:1
position: 3444791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3444720-3444791:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3444752..3444754,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 3444720..3444791
location: region:3444720-3444791:1
so has part: feature:3444720-3444791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3444720-3444791:1:exon

LOC105101457
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105101457
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3451666..3452560
location: region:3451666-3452560:1
so has part: feature:3451666-3452560:1:exon

105101457
type: Gene
SIO_000068: ncbigene

position:3451666:1
position: 3451666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3452560:1
position: 3452560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3451666-3452560:1:exon

LOC105101457
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105101457
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105101457
subclass of: SO_0000673
so part of: LOC105101457
location: 3451666..3452560
location: region:3451666-3452560:1
so has part: feature:3451666-3452560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3451666-3452560:1:exon

LOC105104516
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105104516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3591358..3593492)
location: region:3591358-3593492:-1
so has part: feature:3591358-3593492:-1:exon
subclass of: SO_0000010

105104516
type: Gene
SIO_000068: ncbigene

position:3591358:-1
position: 3591358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3593492:-1
position: 3593492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3591358-3593492:-1:exon

LOC105104516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105104516
product: nanos homolog 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031444478.1
SIO_010081: LOC105104516
subclass of: SO_0000673
so part of: LOC105104516
location: complement(3591358..3593492)
location: region:3591358-3593492:-1
so has part: feature:3591358-3593492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3591358-3593492:-1:exon

LOC105104516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105104516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nanos homolog 2
translation: MGVVPLCFRKPSAAPVHGGPSPSLSSHLPPLQAAMELPPFDMWKDYFNLSQVVSALIQSPGQVQEAPGTGELSPGELSPGEPSTEEPRPGELSSEEPRLGQLRSGKPRHGKLKPGEPRPEAQQEQGPGGRGPSEALATLCNFCKHNGESRRVYTSHRLKTPGGVVVCPILRHYVCPLCGATGDQAHTLKYCSLNGGYQSLYRHSGRNSAGRKVNC
SIO_010081: LOC105104516
subclass of: SO_0000673
so part of: LOC105104516
location: complement(3591867..3592514)
location: region:3591867-3592514:-1
so has part: feature:3591867-3592514:-1:exon

XP_031300338.1
type: Protein
SIO_000068: ncbiprotein

position:3591867:-1
position: 3591867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3592514:-1
position: 3592514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3591867-3592514:-1:exon

FAM107B
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: FAM107B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3615819..3807872)
location: region:3615819-3807872:-1
so has part: feature:3615819-3807872:-1:exon
subclass of: SO_0000010

105104517
type: Gene
SIO_000068: ncbigene

position:3615819:-1
position: 3615819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3807872:-1
position: 3807872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3615819-3807872:-1:exon

FAM107B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAM107B
product: family with sequence similarity 107 member B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010998236.2
SIO_010081: FAM107B
subclass of: SO_0000673
so part of: FAM107B
location: complement(join(3615819..3618508,3619470..3619620,3627086..3627269,3727410..3727470,3807480..3807872))
location: region:3615819-3807872:-1
so has part: feature:3807480-3807872:-1:exon
so has part: feature:3727410-3727470:-1:exon
so has part: feature:3627086-3627269:-1:exon
so has part: feature:3619470-3619620:-1:exon
so has part: feature:3615819-3618508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3807480-3807872:-1:exon

position:3807480:-1
position: 3807480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3727410-3727470:-1:exon

position:3727410:-1
position: 3727410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3727470:-1
position: 3727470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3627086-3627269:-1:exon

position:3627086:-1
position: 3627086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3627269:-1
position: 3627269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3619470-3619620:-1:exon

position:3619470:-1
position: 3619470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3619620:-1
position: 3619620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3615819-3618508:-1:exon

position:3618508:-1
position: 3618508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM107B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAM107B
product: family with sequence similarity 107 member B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_031444563.1
SIO_010081: FAM107B
subclass of: SO_0000673
so part of: FAM107B
location: complement(join(3615819..3618508,3619470..3619620,3627086..3627269,3682857..3682987))
location: region:3615819-3682987:-1
so has part: feature:3682857-3682987:-1:exon
so has part: feature:3627086-3627269:-1:exon
so has part: feature:3619470-3619620:-1:exon
so has part: feature:3615819-3618508:-1:exon

position:3682987:-1
position: 3682987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3682857-3682987:-1:exon

position:3682857:-1
position: 3682857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3627086-3627269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3619470-3619620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3615819-3618508:-1:exon

FAM107B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAM107B
product: family with sequence similarity 107 member B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031444564.1
SIO_010081: FAM107B
subclass of: SO_0000673
so part of: FAM107B
location: complement(join(3615819..3618508,3619470..3619620,3627086..3627269,3636824..3637646))
location: region:3615819-3637646:-1
so has part: feature:3636824-3637646:-1:exon
so has part: feature:3627086-3627269:-1:exon
so has part: feature:3619470-3619620:-1:exon
so has part: feature:3615819-3618508:-1:exon

position:3637646:-1
position: 3637646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3636824-3637646:-1:exon

position:3636824:-1
position: 3636824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3627086-3627269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3619470-3619620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3615819-3618508:-1:exon

FAM107B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAM107B
product: family with sequence similarity 107 member B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031444562.1
SIO_010081: FAM107B
subclass of: SO_0000673
so part of: FAM107B
location: complement(join(3615819..3618508,3619470..3619620,3627086..3627269,3632724..3632745))
location: region:3615819-3632745:-1
so has part: feature:3632724-3632745:-1:exon
so has part: feature:3627086-3627269:-1:exon
so has part: feature:3619470-3619620:-1:exon
so has part: feature:3615819-3618508:-1:exon

position:3632745:-1
position: 3632745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3632724-3632745:-1:exon

position:3632724:-1
position: 3632724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3627086-3627269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3619470-3619620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3615819-3618508:-1:exon

FAM107B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAM107B
product: family with sequence similarity 107 member B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_010998237.2
SIO_010081: FAM107B
subclass of: SO_0000673
so part of: FAM107B
location: complement(join(3615819..3618508,3619470..3619620,3627086..3627269,3630649..3631151))
location: region:3615819-3631151:-1
so has part: feature:3630649-3631151:-1:exon
so has part: feature:3627086-3627269:-1:exon
so has part: feature:3619470-3619620:-1:exon
so has part: feature:3615819-3618508:-1:exon

position:3631151:-1
position: 3631151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3630649-3631151:-1:exon

position:3630649:-1
position: 3630649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3627086-3627269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3619470-3619620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3615819-3618508:-1:exon

FAM107B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAM107B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM107B isoform X2
translation: MSMWKARLAERLKSPSGSMHPFPCSALLACFGNTRENVPFDQPSAADTHPTICVQPMANAGGEEGTPEKRRPSCTCSERNGGANQNSSNHTAVQPAETPEDLPGSPEDGSDCEAVTFQTSIPRPSIIEMPTEEEGCPKEPKCPGLEKKTASDCTPEDPDLKDTYLVPRNIMAEPDYIHDDNPELIRPQKLVNPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRKRDQVIKQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQKLQEEQENAPEFVKVKGNLRRTGQEVAQAQES
SIO_010081: FAM107B
subclass of: SO_0000673
so part of: FAM107B
location: complement(join(3618392..3618508,3619470..3619620,3627086..3627269,3727410..3727470,3807480..3807872))
location: region:3618392-3807872:-1
so has part: feature:3807480-3807872:-1:exon
so has part: feature:3727410-3727470:-1:exon
so has part: feature:3627086-3627269:-1:exon
so has part: feature:3619470-3619620:-1:exon
so has part: feature:3618392-3618508:-1:exon

XP_010996538.1
type: Protein
SIO_000068: ncbiprotein

position:3618392:-1
position: 3618392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3807480-3807872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3727410-3727470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3627086-3627269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3619470-3619620:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3618392-3618508:-1:exon

FAM107B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAM107B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM107B isoform X3
translation: MIQFMSVTPGADCTPEDPDLKDTYLVPRNIMAEPDYIHDDNPELIRPQKLVNPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRKRDQVIKQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQKLQEEQENAPEFVKVKGNLRRTGQEVAQAQES
SIO_010081: FAM107B
subclass of: SO_0000673
so part of: FAM107B
location: complement(join(3618392..3618508,3619470..3619620,3627086..3627269,3630649..3630682))
location: region:3618392-3630682:-1
so has part: feature:3630649-3630682:-1:exon
so has part: feature:3627086-3627269:-1:exon
so has part: feature:3619470-3619620:-1:exon
so has part: feature:3618392-3618508:-1:exon

XP_010996539.1
type: Protein
SIO_000068: ncbiprotein

position:3630682:-1
position: 3630682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3630649-3630682:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3627086-3627269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3619470-3619620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3618392-3618508:-1:exon

FAM107B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAM107B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM107B isoform X1
translation: MAEPDYIHDDNPELIRPQKLVNPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRKRDQVIKQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQKLQEEQENAPEFVKVKGNLRRTGQEVAQAQES
SIO_010081: FAM107B
subclass of: SO_0000673
so part of: FAM107B
location: complement(join(3618392..3618508,3619470..3619620,3627086..3627213))
location: region:3618392-3627213:-1
so has part: feature:3627086-3627213:-1:exon
so has part: feature:3619470-3619620:-1:exon
so has part: feature:3618392-3618508:-1:exon

XP_031300422.1
type: Protein
SIO_000068: ncbiprotein

position:3627213:-1
position: 3627213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3627086-3627213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3619470-3619620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3618392-3618508:-1:exon

FAM107B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAM107B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM107B isoform X1
translation: MAEPDYIHDDNPELIRPQKLVNPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRKRDQVIKQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQKLQEEQENAPEFVKVKGNLRRTGQEVAQAQES
SIO_010081: FAM107B
subclass of: SO_0000673
so part of: FAM107B
location: complement(join(3618392..3618508,3619470..3619620,3627086..3627213))
location: region:3618392-3627213:-1
so has part: feature:3627086-3627213:-1:exon
so has part: feature:3619470-3619620:-1:exon
so has part: feature:3618392-3618508:-1:exon

XP_031300423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3627086-3627213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3619470-3619620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3618392-3618508:-1:exon

FAM107B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAM107B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM107B isoform X1
translation: MAEPDYIHDDNPELIRPQKLVNPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRKRDQVIKQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQKLQEEQENAPEFVKVKGNLRRTGQEVAQAQES
SIO_010081: FAM107B
subclass of: SO_0000673
so part of: FAM107B
location: complement(join(3618392..3618508,3619470..3619620,3627086..3627213))
location: region:3618392-3627213:-1
so has part: feature:3627086-3627213:-1:exon
so has part: feature:3619470-3619620:-1:exon
so has part: feature:3618392-3618508:-1:exon

XP_031300424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3627086-3627213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3619470-3619620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3618392-3618508:-1:exon

CDNF
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: CDNF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3831779..3846791)
location: region:3831779-3846791:-1
so has part: feature:3831779-3846791:-1:exon
subclass of: SO_0000010

105104519
type: Gene
SIO_000068: ncbigene

position:3831779:-1
position: 3831779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3846791:-1
position: 3846791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3831779-3846791:-1:exon

CDNF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CDNF
product: cerebral dopamine neurotrophic factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010998238.2
SIO_010081: CDNF
subclass of: SO_0000673
so part of: CDNF
location: complement(join(3831779..3832460,3835551..3835692,3836771..3836898,3846572..3846791))
location: region:3831779-3846791:-1
so has part: feature:3846572-3846791:-1:exon
so has part: feature:3836771-3836898:-1:exon
so has part: feature:3835551-3835692:-1:exon
so has part: feature:3831779-3832460:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3846572-3846791:-1:exon

position:3846572:-1
position: 3846572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3836771-3836898:-1:exon

position:3836771:-1
position: 3836771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3836898:-1
position: 3836898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3835551-3835692:-1:exon

position:3835551:-1
position: 3835551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3835692:-1
position: 3835692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3831779-3832460:-1:exon

position:3832460:-1
position: 3832460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDNF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CDNF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebral dopamine neurotrophic factor
translation: MWCGVPAAMVAFCAGLWVSNPGQAQGQEAGGRPGADCEVCNEFLSRFYNSLTARGVDFSLETLEKELISFCLDVKGKENRLCYYLGATEDAAAKILSEVTRPMSVHMPAMKICEKLKKVDSQICELKYEKKLDLASVDLSKMRVTELKQILYSWGEECKACAEKTDYVNLIKELAPKYAAMHRKTEL
SIO_010081: CDNF
subclass of: SO_0000673
so part of: CDNF
location: complement(join(3832282..3832460,3835551..3835692,3836771..3836898,3846572..3846686))
location: region:3832282-3846686:-1
so has part: feature:3846572-3846686:-1:exon
so has part: feature:3836771-3836898:-1:exon
so has part: feature:3835551-3835692:-1:exon
so has part: feature:3832282-3832460:-1:exon

XP_010996540.1
type: Protein
SIO_000068: ncbiprotein

position:3832282:-1
position: 3832282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3846686:-1
position: 3846686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3846572-3846686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3836771-3836898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3835551-3835692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3832282-3832460:-1:exon

HSPA14
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: HSPA14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3847065..3872084
location: region:3847065-3872084:1
so has part: feature:3847065-3872084:1:exon
subclass of: SO_0000010

105104523
type: Gene
SIO_000068: ncbigene

position:3847065:1
position: 3847065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3872084:1
position: 3872084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3847065-3872084:1:exon

HSPA14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HSPA14
product: heat shock protein family A (Hsp70) member 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_031444571.1
SIO_010081: HSPA14
subclass of: SO_0000673
so part of: HSPA14
location: join(3847065..3847246,3848356..3848436,3848512..3848594,3856947..3856995,3857128..3857233,3858106..3858196,3859102..3859206,3860280..3860438,3861707..3861862,3863952..3864054,3868217..3868429,3870977..3871047,3871904..3872082)
location: region:3847065-3872082:1
so has part: feature:3847065-3847246:1:exon
so has part: feature:3848356-3848436:1:exon
so has part: feature:3848512-3848594:1:exon
so has part: feature:3856947-3856995:1:exon
so has part: feature:3857128-3857233:1:exon
so has part: feature:3858106-3858196:1:exon
so has part: feature:3859102-3859206:1:exon
so has part: feature:3860280-3860438:1:exon
so has part: feature:3861707-3861862:1:exon
so has part: feature:3863952-3864054:1:exon
so has part: feature:3868217-3868429:1:exon
so has part: feature:3870977-3871047:1:exon
so has part: feature:3871904-3872082:1:exon

position:3872082:1
position: 3872082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3847065-3847246:1:exon

position:3847246:1
position: 3847246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3848356-3848436:1:exon

position:3848356:1
position: 3848356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3848436:1
position: 3848436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3848512-3848594:1:exon

position:3848512:1
position: 3848512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3848594:1
position: 3848594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3856947-3856995:1:exon

position:3856947:1
position: 3856947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3856995:1
position: 3856995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3857128-3857233:1:exon

position:3857128:1
position: 3857128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3857233:1
position: 3857233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3858106-3858196:1:exon

position:3858106:1
position: 3858106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3858196:1
position: 3858196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3859102-3859206:1:exon

position:3859102:1
position: 3859102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3859206:1
position: 3859206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3860280-3860438:1:exon

position:3860280:1
position: 3860280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3860438:1
position: 3860438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3861707-3861862:1:exon

position:3861707:1
position: 3861707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3861862:1
position: 3861862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3863952-3864054:1:exon

position:3863952:1
position: 3863952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3864054:1
position: 3864054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3868217-3868429:1:exon

position:3868217:1
position: 3868217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3868429:1
position: 3868429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3870977-3871047:1:exon

position:3870977:1
position: 3870977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3871047:1
position: 3871047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3871904-3872082:1:exon

position:3871904:1
position: 3871904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HSPA14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HSPA14
product: heat shock protein family A (Hsp70) member 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_031444570.1
SIO_010081: HSPA14
subclass of: SO_0000673
so part of: HSPA14
location: join(3847066..3847246,3848356..3848471,3856947..3856995,3857128..3857233,3858106..3858196,3859102..3859206,3860280..3860438,3861707..3861862,3863952..3864054,3868217..3868429,3868830..3869003,3870977..3871047,3871904..3872082)
location: region:3847066-3872082:1
so has part: feature:3847066-3847246:1:exon
so has part: feature:3848356-3848471:1:exon
so has part: feature:3856947-3856995:1:exon
so has part: feature:3857128-3857233:1:exon
so has part: feature:3858106-3858196:1:exon
so has part: feature:3859102-3859206:1:exon
so has part: feature:3860280-3860438:1:exon
so has part: feature:3861707-3861862:1:exon
so has part: feature:3863952-3864054:1:exon
so has part: feature:3868217-3868429:1:exon
so has part: feature:3868830-3869003:1:exon
so has part: feature:3870977-3871047:1:exon
so has part: feature:3871904-3872082:1:exon

position:3847066:1
position: 3847066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3847066-3847246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3848356-3848471:1:exon

position:3848471:1
position: 3848471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3856947-3856995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3857128-3857233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3858106-3858196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3859102-3859206:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3860280-3860438:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3861707-3861862:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3863952-3864054:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3868217-3868429:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3868830-3869003:1:exon

position:3868830:1
position: 3868830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3869003:1
position: 3869003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3870977-3871047:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3871904-3872082:1:exon

HSPA14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HSPA14
product: heat shock protein family A (Hsp70) member 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010998245.2
SIO_010081: HSPA14
subclass of: SO_0000673
so part of: HSPA14
location: join(3847067..3847246,3848356..3848436,3848512..3848594,3856947..3856995,3857128..3857233,3858106..3858196,3859102..3859206,3860280..3860438,3861707..3861862,3863952..3864054,3868217..3868429,3868830..3869003,3870977..3871047,3871904..3872084)
location: region:3847067-3872084:1
so has part: feature:3847067-3847246:1:exon
so has part: feature:3848356-3848436:1:exon
so has part: feature:3848512-3848594:1:exon
so has part: feature:3856947-3856995:1:exon
so has part: feature:3857128-3857233:1:exon
so has part: feature:3858106-3858196:1:exon
so has part: feature:3859102-3859206:1:exon
so has part: feature:3860280-3860438:1:exon
so has part: feature:3861707-3861862:1:exon
so has part: feature:3863952-3864054:1:exon
so has part: feature:3868217-3868429:1:exon
so has part: feature:3868830-3869003:1:exon
so has part: feature:3870977-3871047:1:exon
so has part: feature:3871904-3872084:1:exon

position:3847067:1
position: 3847067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3847067-3847246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3848356-3848436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3848512-3848594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3856947-3856995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3857128-3857233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3858106-3858196:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3859102-3859206:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3860280-3860438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3861707-3861862:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3863952-3864054:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3868217-3868429:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3868830-3869003:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3870977-3871047:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3871904-3872084:1:exon

HSPA14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HSPA14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 14 isoform X2
translation: MAAIGVHLGCTSACVAVYKDGRADVVANDAGDRVTPAVVAYSENEEVPFCSFLHFEISSEDPQAQKYIMESKCLVIEKNGKLRYEIDTGGETKFVNPEDVARLIFSKMKETAHSVLGSDANDVVITVPFDFGEKQKSALGEAARAAGFNVLRLIHEPSAALLAYGIGQDSPTGKSNILVFKLGGTSLSISVMEVNSGIYRVLSTNTDNIGGTHFTETLAQYLASEFQRCFKHDVRGNARAMMKLMNSADTAKHSLSTLGSANCFLDSLYEGQDFDCNVSRARFELLCSPLFNKCIEAIRKLLEQGGFTADDINKVVLCGGSSRIPRLQQMIKDLFPAVELLNSIPPDEVIPIGAATEAGILIGKENPLVEDSLKIECSTKDILVKGVDESGANSFKVLFPSGTPLPARRQHTLQAPGSISSVCLELYESEGKNSTKEENKFAQVVLQDLDKKENGLRDILAVLTMKRDGSLHVTCTDQETGKCEAITIEVAS
SIO_010081: HSPA14
subclass of: SO_0000673
so part of: HSPA14
location: join(3847190..3847246,3848356..3848471,3856947..3856995,3857128..3857233,3858106..3858196,3859102..3859206,3860280..3860438,3861707..3861862,3863952..3864054,3868217..3868429,3868830..3869003,3870977..3871047,3871904..3871982)
location: region:3847190-3871982:1
so has part: feature:3847190-3847246:1:exon
so has part: feature:3848356-3848471:1:exon
so has part: feature:3856947-3856995:1:exon
so has part: feature:3857128-3857233:1:exon
so has part: feature:3858106-3858196:1:exon
so has part: feature:3859102-3859206:1:exon
so has part: feature:3860280-3860438:1:exon
so has part: feature:3861707-3861862:1:exon
so has part: feature:3863952-3864054:1:exon
so has part: feature:3868217-3868429:1:exon
so has part: feature:3868830-3869003:1:exon
so has part: feature:3870977-3871047:1:exon
so has part: feature:3871904-3871982:1:exon

XP_031300430.1
type: Protein
SIO_000068: ncbiprotein

position:3847190:1
position: 3847190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3871982:1
position: 3871982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3847190-3847246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3848356-3848471:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3856947-3856995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3857128-3857233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3858106-3858196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3859102-3859206:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3860280-3860438:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3861707-3861862:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3863952-3864054:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3868217-3868429:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3868830-3869003:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3870977-3871047:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3871904-3871982:1:exon

HSPA14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HSPA14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 14 isoform X1
translation: MAAIGVHLGCTSACVAVYKDGRADVVANDAGDRVTPAVVAYSENEEVVGLAAKQSRIRNISNTVMKVKQILGRSSEDPQAQKYIMESKCLVIEKNGKLRYEIDTGGETKFVNPEDVARLIFSKMKETAHSVLGSDANDVVITVPFDFGEKQKSALGEAARAAGFNVLRLIHEPSAALLAYGIGQDSPTGKSNILVFKLGGTSLSISVMEVNSGIYRVLSTNTDNIGGTHFTETLAQYLASEFQRCFKHDVRGNARAMMKLMNSADTAKHSLSTLGSANCFLDSLYEGQDFDCNVSRARFELLCSPLFNKCIEAIRKLLEQGGFTADDINKVVLCGGSSRIPRLQQMIKDLFPAVELLNSIPPDEVIPIGAATEAGILIGKENPLVEDSLKIECSTKDILVKGVDESGANSFKVLFPSGTPLPARRQHTLQAPGSISSVCLELYESEGKNSTKEENKFAQVVLQDLDKKENGLRDILAVLTMKRDGSLHVTCTDQETGKCEAITIEVAS
SIO_010081: HSPA14
subclass of: SO_0000673
so part of: HSPA14
location: join(3847190..3847246,3848356..3848436,3848512..3848594,3856947..3856995,3857128..3857233,3858106..3858196,3859102..3859206,3860280..3860438,3861707..3861862,3863952..3864054,3868217..3868429,3868830..3869003,3870977..3871047,3871904..3871982)
location: region:3847190-3871982:1
so has part: feature:3847190-3847246:1:exon
so has part: feature:3848356-3848436:1:exon
so has part: feature:3848512-3848594:1:exon
so has part: feature:3856947-3856995:1:exon
so has part: feature:3857128-3857233:1:exon
so has part: feature:3858106-3858196:1:exon
so has part: feature:3859102-3859206:1:exon
so has part: feature:3860280-3860438:1:exon
so has part: feature:3861707-3861862:1:exon
so has part: feature:3863952-3864054:1:exon
so has part: feature:3868217-3868429:1:exon
so has part: feature:3868830-3869003:1:exon
so has part: feature:3870977-3871047:1:exon
so has part: feature:3871904-3871982:1:exon

XP_010996547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3847190-3847246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3848356-3848436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3848512-3848594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3856947-3856995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3857128-3857233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3858106-3858196:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3859102-3859206:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3860280-3860438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3861707-3861862:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3863952-3864054:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3868217-3868429:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3868830-3869003:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3870977-3871047:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3871904-3871982:1:exon

HSPA14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HSPA14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 14 isoform X3
translation: MAAIGVHLGCTSACVAVYKDGRADVVANDAGDRVTPAVVAYSENEEVVGLAAKQSRIRNISNTVMKVKQILGRSSEDPQAQKYIMESKCLVIEKNGKLRYEIDTGGETKFVNPEDVARLIFSKMKETAHSVLGSDANDVVITVPFDFGEKQKSALGEAARAAGFNVLRLIHEPSAALLAYGIGQDSPTGKSNILVFKLGGTSLSISVMEVNSGIYRVLSTNTDNIGGTHFTETLAQYLASEFQRCFKHDVRGNARAMMKLMNSADTAKHSLSTLGSANCFLDSLYEGQDFDCNVSRARFELLCSPLFNKCIEAIRKLLEQGGFTADDINKVVLCGGSSRIPRLQQMIKDLFPAVELLNSIPPDEVIPIGAATEAGILIGKENPLVEDSLKIECSTKDILVKVVLQDLDKKENGLRDILAVLTMKRDGSLHVTCTDQETGKCEAITIEVAS
SIO_010081: HSPA14
subclass of: SO_0000673
so part of: HSPA14
location: join(3847190..3847246,3848356..3848436,3848512..3848594,3856947..3856995,3857128..3857233,3858106..3858196,3859102..3859206,3860280..3860438,3861707..3861862,3863952..3864054,3868217..3868429,3870977..3871047,3871904..3871982)
location: region:3847190-3871982:1
so has part: feature:3847190-3847246:1:exon
so has part: feature:3848356-3848436:1:exon
so has part: feature:3848512-3848594:1:exon
so has part: feature:3856947-3856995:1:exon
so has part: feature:3857128-3857233:1:exon
so has part: feature:3858106-3858196:1:exon
so has part: feature:3859102-3859206:1:exon
so has part: feature:3860280-3860438:1:exon
so has part: feature:3861707-3861862:1:exon
so has part: feature:3863952-3864054:1:exon
so has part: feature:3868217-3868429:1:exon
so has part: feature:3870977-3871047:1:exon
so has part: feature:3871904-3871982:1:exon

XP_031300431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3847190-3847246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3848356-3848436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3848512-3848594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3856947-3856995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3857128-3857233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3858106-3858196:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3859102-3859206:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3860280-3860438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3861707-3861862:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3863952-3864054:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3868217-3868429:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3870977-3871047:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3871904-3871982:1:exon

HSPA14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HSPA14
product: heat shock protein family A (Hsp70) member 14, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_031444573.1
SIO_010081: HSPA14
subclass of: SO_0000673
so part of: HSPA14
location: join(3848356..3848471,3850615..3851344,3851808..3856725)
location: region:3848356-3856725:1
so has part: feature:3848356-3848471:1:exon
so has part: feature:3850615-3851344:1:exon
so has part: feature:3851808-3856725:1:exon

position:3856725:1
position: 3856725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3848356-3848471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3850615-3851344:1:exon

position:3850615:1
position: 3850615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3851344:1
position: 3851344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3851808-3856725:1:exon

position:3851808:1
position: 3851808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HSPA14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HSPA14
product: heat shock protein family A (Hsp70) member 14, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_031444572.1
SIO_010081: HSPA14
subclass of: SO_0000673
so part of: HSPA14
location: join(3848381..3848436,3848512..3848594,3850615..3851344,3851808..3856725)
location: region:3848381-3856725:1
so has part: feature:3848381-3848436:1:exon
so has part: feature:3848512-3848594:1:exon
so has part: feature:3850615-3851344:1:exon
so has part: feature:3851808-3856725:1:exon

position:3848381:1
position: 3848381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3848381-3848436:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3848512-3848594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3850615-3851344:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3851808-3856725:1:exon

HSPA14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HSPA14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 14 isoform X4
translation: MRSLDLASQQLALRGKNRLAPGDRPEHTELPHLQIGTLLPRSLLQLAFSQSAMATSGSSAGIRWSRQETRTLLSILGEAEYIQRLQTVHHNADVYQAVSKRMQQEGFRRTERQCRSKFKVLKALYLKAYVAHATSMGDPPHCPFYDTLDQLLRNQIVTDPDPDNLMEEAAWPKHCDQNLTASDTPGQEGTSILGAKRTQAADHSPALQTVKESDEDCQLRNSDQMQEASDLEDSWDESSGAGCSQGTPSYSSSHHLFRGAVAPCQSSPMTRLGVSGEPSPCTSTGRNTPGVASAPQPPVSSRVPFVSGGNRPLNSEPPPRWARRRRRSVARTIAAELAENRRLARELSKREEEKLDRLIAIGEVASAQQDIANELRRDAVVAVRRLATAVEEATGAFQLGLEKLLQRLISNTKS
SIO_010081: HSPA14
subclass of: SO_0000673
so part of: HSPA14
location: join(3850621..3851344,3851808..3852328)
location: region:3850621-3852328:1
so has part: feature:3850621-3851344:1:exon
so has part: feature:3851808-3852328:1:exon

XP_031300432.1
type: Protein
SIO_000068: ncbiprotein

position:3850621:1
position: 3850621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3852328:1
position: 3852328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3850621-3851344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3851808-3852328:1:exon

HSPA14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HSPA14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 14 isoform X4
translation: MRSLDLASQQLALRGKNRLAPGDRPEHTELPHLQIGTLLPRSLLQLAFSQSAMATSGSSAGIRWSRQETRTLLSILGEAEYIQRLQTVHHNADVYQAVSKRMQQEGFRRTERQCRSKFKVLKALYLKAYVAHATSMGDPPHCPFYDTLDQLLRNQIVTDPDPDNLMEEAAWPKHCDQNLTASDTPGQEGTSILGAKRTQAADHSPALQTVKESDEDCQLRNSDQMQEASDLEDSWDESSGAGCSQGTPSYSSSHHLFRGAVAPCQSSPMTRLGVSGEPSPCTSTGRNTPGVASAPQPPVSSRVPFVSGGNRPLNSEPPPRWARRRRRSVARTIAAELAENRRLARELSKREEEKLDRLIAIGEVASAQQDIANELRRDAVVAVRRLATAVEEATGAFQLGLEKLLQRLISNTKS
SIO_010081: HSPA14
subclass of: SO_0000673
so part of: HSPA14
location: join(3850621..3851344,3851808..3852328)
location: region:3850621-3852328:1
so has part: feature:3850621-3851344:1:exon
so has part: feature:3851808-3852328:1:exon

XP_031300433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3850621-3851344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3851808-3852328:1:exon

DCLRE1C
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: DCLRE1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3868220..3946125)
location: region:3868220-3946125:-1
so has part: feature:3868220-3946125:-1:exon
subclass of: SO_0000010

105104520
type: Gene
SIO_000068: ncbigene

position:3868220:-1
position: 3868220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3946125:-1
position: 3946125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3868220-3946125:-1:exon

DCLRE1C
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: DCLRE1C
product: DNA cross-link repair 1C, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004134214.1
SIO_010081: DCLRE1C
so part of: DCLRE1C
location: complement(join(3868220..3868354,3869421..3869574,3873921..3874094,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3912414..3912515,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3935173..3935368))
location: region:3868220-3935368:-1
so has part: feature:3935173-3935368:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3912414-3912515:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3873921-3874094:-1:exon
so has part: feature:3869421-3869574:-1:exon
so has part: feature:3868220-3868354:-1:exon

position:3935368:-1
position: 3935368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935173-3935368:-1:exon

position:3935173:-1
position: 3935173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3927546-3927597:-1:exon

position:3927546:-1
position: 3927546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3927597:-1
position: 3927597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3925238-3925322:-1:exon

position:3925238:-1
position: 3925238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3925322:-1
position: 3925322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3921151-3921210:-1:exon

position:3921151:-1
position: 3921151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3921210:-1
position: 3921210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3919219-3919274:-1:exon

position:3919219:-1
position: 3919219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3919274:-1
position: 3919274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3918581-3918682:-1:exon

position:3918581:-1
position: 3918581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3918682:-1
position: 3918682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3915633-3915705:-1:exon

position:3915633:-1
position: 3915633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3915705:-1
position: 3915705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3915335-3915475:-1:exon

position:3915335:-1
position: 3915335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3915475:-1
position: 3915475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3912414-3912515:-1:exon

position:3912414:-1
position: 3912414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3912515:-1
position: 3912515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3910746-3910882:-1:exon

position:3910746:-1
position: 3910746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3910882:-1
position: 3910882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3910185-3910239:-1:exon

position:3910185:-1
position: 3910185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3910239:-1
position: 3910239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3905795-3905883:-1:exon

position:3905795:-1
position: 3905795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3905883:-1
position: 3905883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3905020-3905114:-1:exon

position:3905020:-1
position: 3905020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3905114:-1
position: 3905114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3873921-3874094:-1:exon

position:3873921:-1
position: 3873921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3874094:-1
position: 3874094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3869421-3869574:-1:exon

position:3869421:-1
position: 3869421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3869574:-1
position: 3869574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3868220-3868354:-1:exon

position:3868354:-1
position: 3868354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCLRE1C
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: DCLRE1C
product: DNA cross-link repair 1C, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004134215.1
SIO_010081: DCLRE1C
so part of: DCLRE1C
location: complement(join(3868228..3868354,3869148..3869194,3869421..3869574,3873921..3874094,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3912414..3912515,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3935173..3935368))
location: region:3868228-3935368:-1
so has part: feature:3935173-3935368:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3912414-3912515:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3873921-3874094:-1:exon
so has part: feature:3869421-3869574:-1:exon
so has part: feature:3869148-3869194:-1:exon
so has part: feature:3868228-3868354:-1:exon

position:3868228:-1
position: 3868228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935173-3935368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3927546-3927597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912414-3912515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3873921-3874094:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3869421-3869574:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3869148-3869194:-1:exon

position:3869148:-1
position: 3869148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3869194:-1
position: 3869194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3868228-3868354:-1:exon

DCLRE1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DCLRE1C
product: DNA cross-link repair 1C, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031444567.1
SIO_010081: DCLRE1C
subclass of: SO_0000673
so part of: DCLRE1C
location: complement(join(3871094..3871694,3873921..3874094,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3912414..3912515,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3935173..3935368))
location: region:3871094-3935368:-1
so has part: feature:3935173-3935368:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3912414-3912515:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3873921-3874094:-1:exon
so has part: feature:3871094-3871694:-1:exon

position:3871094:-1
position: 3871094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935173-3935368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3927546-3927597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912414-3912515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3873921-3874094:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3871094-3871694:-1:exon

position:3871694:-1
position: 3871694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCLRE1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DCLRE1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein artemis isoform X5
translation: MSSFEGQMAEYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTNPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNGTVLYTGDFRLAKGEAARLELLHSGGRVKDIQSVYLDTTFCDPKYYQIPSREECLSGILELVRGWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGAQVHVDKLDMFRNMPDILHHLTTDRDTQIHACRHPKAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERTRKTSVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNVYPNVIPLGTTMDKVKEILKPLCRSSQNIEPKYKPLGKLKRARTIHRDAGTAELQDLWVGESTDMDLQDGYLRIFNCTEQAPQPLSCFRDQLHISLSNSSFDDNFKFDH
SIO_010081: DCLRE1C
subclass of: SO_0000673
so part of: DCLRE1C
location: complement(join(3871687..3871694,3873921..3874094,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3912414..3912515,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3935173..3935281))
location: region:3871687-3935281:-1
so has part: feature:3935173-3935281:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3912414-3912515:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3873921-3874094:-1:exon
so has part: feature:3871687-3871694:-1:exon

XP_031300427.1
type: Protein
SIO_000068: ncbiprotein

position:3871687:-1
position: 3871687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3935281:-1
position: 3935281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935173-3935281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3927546-3927597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912414-3912515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3873921-3874094:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3871687-3871694:-1:exon

SUV39H2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SUV39H2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3874802..3894569
location: region:3874802-3894569:1
so has part: feature:3874802-3894569:1:exon
subclass of: SO_0000010

105104521
type: Gene
SIO_000068: ncbigene

position:3874802:1
position: 3874802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3894569:1
position: 3894569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3874802-3894569:1:exon

SUV39H2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SUV39H2
product: suppressor of variegation 3-9 homolog 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031444575.1
SIO_010081: SUV39H2
subclass of: SO_0000673
so part of: SUV39H2
location: join(3874802..3875485,3887394..3888065,3889786..3889932,3891385..3891514,3892297..3894569)
location: region:3874802-3894569:1
so has part: feature:3874802-3875485:1:exon
so has part: feature:3887394-3888065:1:exon
so has part: feature:3889786-3889932:1:exon
so has part: feature:3891385-3891514:1:exon
so has part: feature:3892297-3894569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3874802-3875485:1:exon

position:3875485:1
position: 3875485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3887394-3888065:1:exon

position:3887394:1
position: 3887394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3888065:1
position: 3888065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3889786-3889932:1:exon

position:3889786:1
position: 3889786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3889932:1
position: 3889932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3891385-3891514:1:exon

position:3891385:1
position: 3891385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3891514:1
position: 3891514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3892297-3894569:1:exon

position:3892297:1
position: 3892297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUV39H2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SUV39H2
product: suppressor of variegation 3-9 homolog 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_031444574.1
SIO_010081: SUV39H2
subclass of: SO_0000673
so part of: SUV39H2
location: join(3874803..3875485,3877861..3878006,3887394..3888065,3889786..3889932,3891385..3891514,3892297..3894569)
location: region:3874803-3894569:1
so has part: feature:3874803-3875485:1:exon
so has part: feature:3877861-3878006:1:exon
so has part: feature:3887394-3888065:1:exon
so has part: feature:3889786-3889932:1:exon
so has part: feature:3891385-3891514:1:exon
so has part: feature:3892297-3894569:1:exon

position:3874803:1
position: 3874803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3874803-3875485:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3877861-3878006:1:exon

position:3877861:1
position: 3877861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3878006:1
position: 3878006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3887394-3888065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3889786-3889932:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891385-3891514:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3892297-3894569:1:exon

DCLRE1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DCLRE1C
product: DNA cross-link repair 1C, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031444569.1
SIO_010081: DCLRE1C
subclass of: SO_0000673
so part of: DCLRE1C
location: complement(join(3877804..3877908,3885696..3885785,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3912414..3912515,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3935173..3935368))
location: region:3877804-3935368:-1
so has part: feature:3935173-3935368:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3912414-3912515:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3885696-3885785:-1:exon
so has part: feature:3877804-3877908:-1:exon

position:3877804:-1
position: 3877804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935173-3935368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3927546-3927597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912414-3912515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3885696-3885785:-1:exon

position:3885696:-1
position: 3885696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3885785:-1
position: 3885785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3877804-3877908:-1:exon

position:3877908:-1
position: 3877908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCLRE1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DCLRE1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein artemis isoform X7
translation: MSSFEGQMAEYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTNPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNGTVLYTGDFRLAKGEAARLELLHSGGRVKDIQSVYLDTTFCDPKYYQIPSREECLSGILELVRGWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGAQVHVDKLDMFRNMPDILHHLTTDRDTQIHACRHPKAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERTRKTSVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNVYPNVIPLGTTMDKVKEILKPLCRSSQNIEPKYKPLGKLKRARTIHRDAGLGKVALDAWLRHKLDDEDCGSFVGAGHLAHNS
SIO_010081: DCLRE1C
subclass of: SO_0000673
so part of: DCLRE1C
location: complement(join(3877898..3877908,3885696..3885785,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3912414..3912515,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3935173..3935281))
location: region:3877898-3935281:-1
so has part: feature:3935173-3935281:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3912414-3912515:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3885696-3885785:-1:exon
so has part: feature:3877898-3877908:-1:exon

XP_031300429.1
type: Protein
SIO_000068: ncbiprotein

position:3877898:-1
position: 3877898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935173-3935281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3927546-3927597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912414-3912515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3885696-3885785:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3877898-3877908:-1:exon

SUV39H2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SUV39H2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SUV39H2
translation: MEYYLVKWKGWPDSTNTWEPLQNLKCPLLLQQFFNDKRNYLSQVQKGKAITLKENHSSLQPAIAEYIVRKAKQRIALQRWQDELNRRKNHKGMIFVENTVDLEGPPLDFYYINEYRPAPGISLVNEATFGCSCTDCFFEKCCPAEAGVLLAYNKNQQIKIPPGTPIYECNSRCQCGPDCPNRIVQKGTQYSLCIFRTSNGCGWGVKTLVKIKRMTFVMEYVGEVITSEEAERRGQLYDNKGITYLFDLDYESDEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTIHAGEELTFDYQMKGSGDISSDSVDHSPAKKRVRTVCRCGAVTCRGYLN
SIO_010081: SUV39H2
subclass of: SO_0000673
so part of: SUV39H2
location: join(3887397..3888065,3889786..3889932,3891385..3891514,3892297..3892403)
location: region:3887397-3892403:1
so has part: feature:3887397-3888065:1:exon
so has part: feature:3889786-3889932:1:exon
so has part: feature:3891385-3891514:1:exon
so has part: feature:3892297-3892403:1:exon

XP_031300434.1
type: Protein
SIO_000068: ncbiprotein

position:3887397:1
position: 3887397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3892403:1
position: 3892403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3887397-3888065:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3889786-3889932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3891385-3891514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3892297-3892403:1:exon

SUV39H2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SUV39H2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SUV39H2
translation: MEYYLVKWKGWPDSTNTWEPLQNLKCPLLLQQFFNDKRNYLSQVQKGKAITLKENHSSLQPAIAEYIVRKAKQRIALQRWQDELNRRKNHKGMIFVENTVDLEGPPLDFYYINEYRPAPGISLVNEATFGCSCTDCFFEKCCPAEAGVLLAYNKNQQIKIPPGTPIYECNSRCQCGPDCPNRIVQKGTQYSLCIFRTSNGCGWGVKTLVKIKRMTFVMEYVGEVITSEEAERRGQLYDNKGITYLFDLDYESDEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTIHAGEELTFDYQMKGSGDISSDSVDHSPAKKRVRTVCRCGAVTCRGYLN
SIO_010081: SUV39H2
subclass of: SO_0000673
so part of: SUV39H2
location: join(3887397..3888065,3889786..3889932,3891385..3891514,3892297..3892403)
location: region:3887397-3892403:1
so has part: feature:3887397-3888065:1:exon
so has part: feature:3889786-3889932:1:exon
so has part: feature:3891385-3891514:1:exon
so has part: feature:3892297-3892403:1:exon

XP_031300435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3887397-3888065:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3889786-3889932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3891385-3891514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3892297-3892403:1:exon

DCLRE1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DCLRE1C
product: DNA cross-link repair 1C, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031444568.1
SIO_010081: DCLRE1C
subclass of: SO_0000673
so part of: DCLRE1C
location: complement(join(3888062..3889692,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3912414..3912515,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3935173..3935368))
location: region:3888062-3935368:-1
so has part: feature:3935173-3935368:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3912414-3912515:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3888062-3889692:-1:exon

position:3888062:-1
position: 3888062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935173-3935368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3927546-3927597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912414-3912515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3888062-3889692:-1:exon

position:3889692:-1
position: 3889692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCLRE1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DCLRE1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein artemis isoform X6
translation: MSSFEGQMAEYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTNPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNGTVLYTGDFRLAKGEAARLELLHSGGRVKDIQSVYLDTTFCDPKYYQIPSREECLSGILELVRGWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGAQVHVDKLDMFRNMPDILHHLTTDRDTQIHACRHPKAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERTRKTSVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNVYPNVIPLGTTMDKVKEILKPLCRSSQNIEPKYKPLGKLKRARTIHRDAVHKKKGVIKTFTQTIPEESDERGGGKSDGAKEVGLSE
SIO_010081: DCLRE1C
subclass of: SO_0000673
so part of: DCLRE1C
location: complement(join(3889580..3889692,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3912414..3912515,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3935173..3935281))
location: region:3889580-3935281:-1
so has part: feature:3935173-3935281:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3912414-3912515:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3889580-3889692:-1:exon

XP_031300428.1
type: Protein
SIO_000068: ncbiprotein

position:3889580:-1
position: 3889580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935173-3935281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3927546-3927597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912414-3912515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3889580-3889692:-1:exon

DCLRE1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DCLRE1C
product: DNA cross-link repair 1C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031444566.1
SIO_010081: DCLRE1C
subclass of: SO_0000673
so part of: DCLRE1C
location: complement(join(3895528..3897271,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3912414..3912515,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3946018..3946125))
location: region:3895528-3946125:-1
so has part: feature:3946018-3946125:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3912414-3912515:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3895528-3897271:-1:exon

position:3895528:-1
position: 3895528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3946018-3946125:-1:exon

position:3946018:-1
position: 3946018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3927546-3927597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912414-3912515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3895528-3897271:-1:exon

position:3897271:-1
position: 3897271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCLRE1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DCLRE1C
product: DNA cross-link repair 1C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031444565.1
SIO_010081: DCLRE1C
subclass of: SO_0000673
so part of: DCLRE1C
location: complement(join(3895528..3897271,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3935173..3935368))
location: region:3895528-3935368:-1
so has part: feature:3935173-3935368:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3895528-3897271:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3935173-3935368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3927546-3927597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3895528-3897271:-1:exon

DCLRE1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DCLRE1C
product: DNA cross-link repair 1C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_010998239.2
SIO_010081: DCLRE1C
subclass of: SO_0000673
so part of: DCLRE1C
location: complement(join(3895528..3897271,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3912414..3912515,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3935173..3935368))
location: region:3895528-3935368:-1
so has part: feature:3935173-3935368:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3912414-3912515:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3895528-3897271:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3935173-3935368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3927546-3927597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912414-3912515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3895528-3897271:-1:exon

DCLRE1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DCLRE1C
product: DNA cross-link repair 1C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010998240.2
SIO_010081: DCLRE1C
subclass of: SO_0000673
so part of: DCLRE1C
location: complement(join(3895528..3897271,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3912414..3912515,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3927720..3927781,3935173..3935298))
location: region:3895528-3935298:-1
so has part: feature:3935173-3935298:-1:exon
so has part: feature:3927720-3927781:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3912414-3912515:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3895528-3897271:-1:exon

position:3935298:-1
position: 3935298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935173-3935298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3927720-3927781:-1:exon

position:3927720:-1
position: 3927720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3927781:-1
position: 3927781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3927546-3927597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3912414-3912515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3895528-3897271:-1:exon

DCLRE1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DCLRE1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein artemis isoform X2
translation: MSSFEGQMAEYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTNPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNGTVLYTGDFRLAKGEAARLELLHSGGRVKDIQSVYLDTTFCDPKYYQIPSREECLSGILELVRGWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGAQAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERTRKTSVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNVYPNVIPLGTTMDKVKEILKPLCRSSQNIEPKYKPLGKLKRARTIHRDAEEEDSDLFDDPLPIPLRHKVPNQQTYYPEARPMNEVSQNQSEKLTERTGCCKTERMPTSLWADFIDCEESNSESEELETPASAGDMGPVPHPQQKADGEVPQWEVFFKRNDEITDDSLENLPSSTEAGGSQSPKLFSDSDGESTHISSQTSSQSTHISEQGSQGWDSQSDTILLCSQERNCGDLPSLNKGGCIPGIKEHIPASPMEQNVLCPKDMYSDSESRDQDVSIAPSTGEPTALSSGKHMSQEKKPQNLSSNADSQSSSDFEIPSTPEAEQPKREHLQCLYKKLATGESIAVEKSSLHSRATTRKPIQIGSSQNANR
SIO_010081: DCLRE1C
subclass of: SO_0000673
so part of: DCLRE1C
location: complement(join(3896307..3897271,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3935173..3935281))
location: region:3896307-3935281:-1
so has part: feature:3935173-3935281:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3896307-3897271:-1:exon

XP_031300425.1
type: Protein
SIO_000068: ncbiprotein

position:3896307:-1
position: 3896307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935173-3935281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3927546-3927597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3896307-3897271:-1:exon

DCLRE1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DCLRE1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein artemis isoform X1
translation: MSSFEGQMAEYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTNPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNGTVLYTGDFRLAKGEAARLELLHSGGRVKDIQSVYLDTTFCDPKYYQIPSREECLSGILELVRGWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGAQVHVDKLDMFRNMPDILHHLTTDRDTQIHACRHPKAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERTRKTSVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNVYPNVIPLGTTMDKVKEILKPLCRSSQNIEPKYKPLGKLKRARTIHRDAEEEDSDLFDDPLPIPLRHKVPNQQTYYPEARPMNEVSQNQSEKLTERTGCCKTERMPTSLWADFIDCEESNSESEELETPASAGDMGPVPHPQQKADGEVPQWEVFFKRNDEITDDSLENLPSSTEAGGSQSPKLFSDSDGESTHISSQTSSQSTHISEQGSQGWDSQSDTILLCSQERNCGDLPSLNKGGCIPGIKEHIPASPMEQNVLCPKDMYSDSESRDQDVSIAPSTGEPTALSSGKHMSQEKKPQNLSSNADSQSSSDFEIPSTPEAEQPKREHLQCLYKKLATGESIAVEKSSLHSRATTRKPIQIGSSQNANR
SIO_010081: DCLRE1C
subclass of: SO_0000673
so part of: DCLRE1C
location: complement(join(3896307..3897271,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3912414..3912515,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3935173..3935281))
location: region:3896307-3935281:-1
so has part: feature:3935173-3935281:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3912414-3912515:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3896307-3897271:-1:exon

XP_010996541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3935173-3935281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3927546-3927597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912414-3912515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3896307-3897271:-1:exon

DCLRE1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DCLRE1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein artemis isoform X3
translation: MLHLQKQEAVSHMNQLSYKNHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTNPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNGTVLYTGDFRLAKGEAARLELLHSGGRVKDIQSVYLDTTFCDPKYYQIPSREECLSGILELVRGWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGAQVHVDKLDMFRNMPDILHHLTTDRDTQIHACRHPKAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERTRKTSVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNVYPNVIPLGTTMDKVKEILKPLCRSSQNIEPKYKPLGKLKRARTIHRDAEEEDSDLFDDPLPIPLRHKVPNQQTYYPEARPMNEVSQNQSEKLTERTGCCKTERMPTSLWADFIDCEESNSESEELETPASAGDMGPVPHPQQKADGEVPQWEVFFKRNDEITDDSLENLPSSTEAGGSQSPKLFSDSDGESTHISSQTSSQSTHISEQGSQGWDSQSDTILLCSQERNCGDLPSLNKGGCIPGIKEHIPASPMEQNVLCPKDMYSDSESRDQDVSIAPSTGEPTALSSGKHMSQEKKPQNLSSNADSQSSSDFEIPSTPEAEQPKREHLQCLYKKLATGESIAVEKSSLHSRATTRKPIQIGSSQNANR
SIO_010081: DCLRE1C
subclass of: SO_0000673
so part of: DCLRE1C
location: complement(join(3896307..3897271,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3912414..3912515,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927597,3927720..3927777))
location: region:3896307-3927777:-1
so has part: feature:3927720-3927777:-1:exon
so has part: feature:3927546-3927597:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3912414-3912515:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3896307-3897271:-1:exon

XP_010996542.1
type: Protein
SIO_000068: ncbiprotein

position:3927777:-1
position: 3927777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3927720-3927777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3927546-3927597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3912414-3912515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3896307-3897271:-1:exon

DCLRE1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DCLRE1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein artemis isoform X4
translation: MKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTNPKYRFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNGTVLYTGDFRLAKGEAARLELLHSGGRVKDIQSVYLDTTFCDPKYYQIPSREECLSGILELVRGWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGAQVHVDKLDMFRNMPDILHHLTTDRDTQIHACRHPKAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERTRKTSVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNVYPNVIPLGTTMDKVKEILKPLCRSSQNIEPKYKPLGKLKRARTIHRDAEEEDSDLFDDPLPIPLRHKVPNQQTYYPEARPMNEVSQNQSEKLTERTGCCKTERMPTSLWADFIDCEESNSESEELETPASAGDMGPVPHPQQKADGEVPQWEVFFKRNDEITDDSLENLPSSTEAGGSQSPKLFSDSDGESTHISSQTSSQSTHISEQGSQGWDSQSDTILLCSQERNCGDLPSLNKGGCIPGIKEHIPASPMEQNVLCPKDMYSDSESRDQDVSIAPSTGEPTALSSGKHMSQEKKPQNLSSNADSQSSSDFEIPSTPEAEQPKREHLQCLYKKLATGESIAVEKSSLHSRATTRKPIQIGSSQNANR
SIO_010081: DCLRE1C
subclass of: SO_0000673
so part of: DCLRE1C
location: complement(join(3896307..3897271,3905020..3905114,3905795..3905883,3910185..3910239,3910746..3910882,3912414..3912515,3915335..3915475,3915633..3915705,3918581..3918682,3919219..3919274,3921151..3921210,3925238..3925322,3927546..3927592))
location: region:3896307-3927592:-1
so has part: feature:3927546-3927592:-1:exon
so has part: feature:3925238-3925322:-1:exon
so has part: feature:3921151-3921210:-1:exon
so has part: feature:3919219-3919274:-1:exon
so has part: feature:3918581-3918682:-1:exon
so has part: feature:3915633-3915705:-1:exon
so has part: feature:3915335-3915475:-1:exon
so has part: feature:3912414-3912515:-1:exon
so has part: feature:3910746-3910882:-1:exon
so has part: feature:3910185-3910239:-1:exon
so has part: feature:3905795-3905883:-1:exon
so has part: feature:3905020-3905114:-1:exon
so has part: feature:3896307-3897271:-1:exon

XP_031300426.1
type: Protein
SIO_000068: ncbiprotein

position:3927592:-1
position: 3927592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3927546-3927592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3925238-3925322:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3921151-3921210:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3919219-3919274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3918581-3918682:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3915633-3915705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3915335-3915475:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3912414-3912515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3910746-3910882:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3910185-3910239:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3905795-3905883:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3905020-3905114:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3896307-3897271:-1:exon

MEIG1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: MEIG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3945872..3954579
location: region:3945872-3954579:1
so has part: feature:3945872-3954579:1:exon
subclass of: SO_0000010

105104524
type: Gene
SIO_000068: ncbigene

position:3945872:1
position: 3945872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3954579:1
position: 3954579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3945872-3954579:1:exon

MEIG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MEIG1
product: meiosis/spermiogenesis associated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_010998246.2
SIO_010081: MEIG1
subclass of: SO_0000673
so part of: MEIG1
location: join(3945872..3946095,3949816..3949982,3953657..3954579)
location: region:3945872-3954579:1
so has part: feature:3945872-3946095:1:exon
so has part: feature:3949816-3949982:1:exon
so has part: feature:3953657-3954579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3945872-3946095:1:exon

position:3946095:1
position: 3946095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3949816-3949982:1:exon

position:3949816:1
position: 3949816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3949982:1
position: 3949982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3953657-3954579:1:exon

position:3953657:1
position: 3953657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEIG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MEIG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis expressed gene 1 protein homolog
translation: MASCDVKPKSVSHAKKWSEEIENLYRFQQAGYRDEAEYKQVKQVSMVDRWPETGYVKKLQRRDNTYYYYNKQRECDDKDVHKVKIYAY
SIO_010081: MEIG1
subclass of: SO_0000673
so part of: MEIG1
location: join(3949845..3949982,3953657..3953785)
location: region:3949845-3953785:1
so has part: feature:3949845-3949982:1:exon
so has part: feature:3953657-3953785:1:exon

XP_010996548.1
type: Protein
SIO_000068: ncbiprotein

position:3949845:1
position: 3949845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3953785:1
position: 3953785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3949845-3949982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3953657-3953785:1:exon

TRNAI-AAU
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAI-AAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3958621..3958690)
location: region:3958621-3958690:-1
so has part: feature:3958621-3958690:-1:exon
subclass of: SO_0000663

116150617
type: Gene
SIO_000068: ncbigene

position:3958621:-1
position: 3958621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3958690:-1
position: 3958690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3958621-3958690:-1:exon

TRNAI-AAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAI-AAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3958658..3958660),aa:Ile, seq:aat)
SIO_010081: TRNAI-AAU
subclass of: SO_0000673
so part of: TRNAI-AAU
location: complement(3958621..3958690)
location: region:3958621-3958690:-1
so has part: feature:3958621-3958690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3958621-3958690:-1:exon

ACBD7
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ACBD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4010102..4017674)
location: region:4010102-4017674:-1
so has part: feature:4010102-4017674:-1:exon
subclass of: SO_0000010

105104529
type: Gene
SIO_000068: ncbigene

position:4010102:-1
position: 4010102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4017674:-1
position: 4017674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4010102-4017674:-1:exon

ACBD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ACBD7
product: acyl-CoA binding domain containing 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_031444577.1
SIO_010081: ACBD7
subclass of: SO_0000673
so part of: ACBD7
location: complement(join(4010102..4011545,4012057..4012119,4012225..4012342,4017610..4017674))
location: region:4010102-4017674:-1
so has part: feature:4017610-4017674:-1:exon
so has part: feature:4012225-4012342:-1:exon
so has part: feature:4012057-4012119:-1:exon
so has part: feature:4010102-4011545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4017610-4017674:-1:exon

position:4017610:-1
position: 4017610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4012225-4012342:-1:exon

position:4012225:-1
position: 4012225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4012342:-1
position: 4012342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4012057-4012119:-1:exon

position:4012057:-1
position: 4012057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4012119:-1
position: 4012119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4010102-4011545:-1:exon

position:4011545:-1
position: 4011545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACBD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ACBD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-CoA-binding domain-containing protein 7
translation: MSLQGYFDKAADDVRKLKTRPDDEELKVLYGLYKQSVVGDVDIECPGVLDLKGKAKWEAWNLQKGLSKDDAMSAYISKAKELIEKYGI
SIO_010081: ACBD7
subclass of: SO_0000673
so part of: ACBD7
location: complement(join(4011472..4011545,4012057..4012119,4012225..4012342,4017610..4017621))
location: region:4011472-4017621:-1
so has part: feature:4017610-4017621:-1:exon
so has part: feature:4012225-4012342:-1:exon
so has part: feature:4012057-4012119:-1:exon
so has part: feature:4011472-4011545:-1:exon

XP_031300437.1
type: Protein
SIO_000068: ncbiprotein

position:4011472:-1
position: 4011472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4017621:-1
position: 4017621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4017610-4017621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4012225-4012342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4012057-4012119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4011472-4011545:-1:exon

RPP38
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: RPP38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4036655..4041283
location: region:4036655-4041283:1
so has part: feature:4036655-4041283:1:exon
subclass of: SO_0000010

105104525
type: Gene
SIO_000068: ncbigene

position:4036655:1
position: 4036655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4041283:1
position: 4041283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4036655-4041283:1:exon

RPP38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RPP38
product: ribonuclease P/MRP subunit p38
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_010998248.2
SIO_010081: RPP38
subclass of: SO_0000673
so part of: RPP38
location: join(4036655..4036933,4038278..4038403,4040339..4041283)
location: region:4036655-4041283:1
so has part: feature:4036655-4036933:1:exon
so has part: feature:4038278-4038403:1:exon
so has part: feature:4040339-4041283:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4036655-4036933:1:exon

position:4036933:1
position: 4036933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4038278-4038403:1:exon

position:4038278:1
position: 4038278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4038403:1
position: 4038403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4040339-4041283:1:exon

position:4040339:1
position: 4040339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPP38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RPP38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease P protein subunit p38
translation: MAAAPQASGRGSVRKTRPLPVKTSLNNPYVTCWGALEREDMHFILQTLEDRFKSLGLQKIEDKRRKKKQSPLQKQSGDTWSMDMDTGEDSKEKKLEDNQQASGWTPAHIRKQLAIGVNEVTRALERNELLLALVCKSAKPAIITAHLIQLSVSRTVPACQVPRLSERIAPVIGLKCVLALGFRKNTAAFVEEVKAIIPRVPSLRVPWLPDRLEDPKENPETESLESQDKEILETSFEDLSKHKRKLADHQEAVVLQPLRIKKLIPNPNKIRKPPKSKKTT
SIO_010081: RPP38
subclass of: SO_0000673
so part of: RPP38
location: 4040349..4041191
location: region:4040349-4041191:1
so has part: feature:4040349-4041191:1:exon

XP_010996550.1
type: Protein
SIO_000068: ncbiprotein

position:4040349:1
position: 4040349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4041191:1
position: 4041191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4040349-4041191:1:exon

NMT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: NMT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4043011..4098521)
location: region:4043011-4098521:-1
so has part: feature:4043011-4098521:-1:exon
subclass of: SO_0000010

105104530
type: Gene
SIO_000068: ncbigene

position:4043011:-1
position: 4043011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4098521:-1
position: 4098521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4043011-4098521:-1:exon

NMT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NMT2
product: N-myristoyltransferase 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_031444576.1
SIO_010081: NMT2
subclass of: SO_0000673
so part of: NMT2
location: complement(join(4043011..4044461,4044657..4044794,4046656..4046823,4051873..4052043,4059241..4059349,4060454..4060624,4061509..4061625,4061751..4061842,4061939..4062057,4064793..4064937,4069015..4069150,4098399..4098521))
location: region:4043011-4098521:-1
so has part: feature:4098399-4098521:-1:exon
so has part: feature:4069015-4069150:-1:exon
so has part: feature:4064793-4064937:-1:exon
so has part: feature:4061939-4062057:-1:exon
so has part: feature:4061751-4061842:-1:exon
so has part: feature:4061509-4061625:-1:exon
so has part: feature:4060454-4060624:-1:exon
so has part: feature:4059241-4059349:-1:exon
so has part: feature:4051873-4052043:-1:exon
so has part: feature:4046656-4046823:-1:exon
so has part: feature:4044657-4044794:-1:exon
so has part: feature:4043011-4044461:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4098399-4098521:-1:exon

position:4098399:-1
position: 4098399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4069015-4069150:-1:exon

position:4069015:-1
position: 4069015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4069150:-1
position: 4069150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4064793-4064937:-1:exon

position:4064793:-1
position: 4064793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4064937:-1
position: 4064937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4061939-4062057:-1:exon

position:4061939:-1
position: 4061939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4062057:-1
position: 4062057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4061751-4061842:-1:exon

position:4061751:-1
position: 4061751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4061842:-1
position: 4061842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4061509-4061625:-1:exon

position:4061509:-1
position: 4061509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4061625:-1
position: 4061625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4060454-4060624:-1:exon

position:4060454:-1
position: 4060454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4060624:-1
position: 4060624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4059241-4059349:-1:exon

position:4059241:-1
position: 4059241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4059349:-1
position: 4059349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4051873-4052043:-1:exon

position:4051873:-1
position: 4051873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4052043:-1
position: 4052043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4046656-4046823:-1:exon

position:4046656:-1
position: 4046656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4046823:-1
position: 4046823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4044657-4044794:-1:exon

position:4044657:-1
position: 4044657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4044794:-1
position: 4044794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4043011-4044461:-1:exon

position:4044461:-1
position: 4044461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NMT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NMT2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: glycylpeptide N-tetradecanoyltransferase 2
translation: MAEDSESXASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGDLGAKKKKKKQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPTIPMQKLQDIQRAMELLSACQGPARNIDEAAKHRYQFWDTQPVPKLNEVITSHGAIEADKESVRQEPYSLPQGFTWDTLDLGNAEVLRELYTLLNENYVEDNDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVSSNRKLVGFISAIPASIRIYESVKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLPKPVATCRYWHRSLNPRKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTAGLRPMEPRDIKAVQELTNSYLKQFHLAPVMDEEEVAHWFLPQEHIIDTFVVENASGKPTDFLSFYTLPSTVMHHPAHKSLKAAYSFYNIHTETPLLDLMTDALILAKLKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWRCPGTESEKVGLVLQ
SIO_010081: NMT2
subclass of: SO_0000673
so part of: NMT2
location: complement(join(4044441..4044461,4044657..4044794,4046656..4046823,4051873..4052043,4059241..4059349,4060454..4060624,4061509..4061625,4061751..4061842,4061939..4062057,4064793..4064937,4069015..4069150,4098399..4098506))
location: region:4044441-4098506:-1
so has part: feature:4098399-4098506:-1:exon
so has part: feature:4069015-4069150:-1:exon
so has part: feature:4064793-4064937:-1:exon
so has part: feature:4061939-4062057:-1:exon
so has part: feature:4061751-4061842:-1:exon
so has part: feature:4061509-4061625:-1:exon
so has part: feature:4060454-4060624:-1:exon
so has part: feature:4059241-4059349:-1:exon
so has part: feature:4051873-4052043:-1:exon
so has part: feature:4046656-4046823:-1:exon
so has part: feature:4044657-4044794:-1:exon
so has part: feature:4044441-4044461:-1:exon

XP_031300436.1
type: Protein
SIO_000068: ncbiprotein

position:4044441:-1
position: 4044441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4098506:-1
position: 4098506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4098399-4098506:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4069015-4069150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4064793-4064937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4061939-4062057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4061751-4061842:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4061509-4061625:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4060454-4060624:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4059241-4059349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4051873-4052043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4046656-4046823:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4044657-4044794:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4044441-4044461:-1:exon

FAM171A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: FAM171A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4143582..4267213)
location: region:4143582-4267213:-1
so has part: feature:4143582-4267213:-1:exon
subclass of: SO_0000010

105104527
type: Gene
SIO_000068: ncbigene

position:4143582:-1
position: 4143582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4267213:-1
position: 4267213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4143582-4267213:-1:exon

FAM171A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAM171A1
product: family with sequence similarity 171 member A1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_031444583.1
SIO_010081: FAM171A1
subclass of: SO_0000673
so part of: FAM171A1
location: complement(join(4143582..4146532,4147100..4147214,4150138..4150254,4174955..4175113,4189628..4189720,4194921..4195148,4267008..4267213))
location: region:4143582-4267213:-1
so has part: feature:4267008-4267213:-1:exon
so has part: feature:4194921-4195148:-1:exon
so has part: feature:4189628-4189720:-1:exon
so has part: feature:4174955-4175113:-1:exon
so has part: feature:4150138-4150254:-1:exon
so has part: feature:4147100-4147214:-1:exon
so has part: feature:4143582-4146532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4267008-4267213:-1:exon

position:4267008:-1
position: 4267008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4194921-4195148:-1:exon

position:4194921:-1
position: 4194921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4195148:-1
position: 4195148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4189628-4189720:-1:exon

position:4189628:-1
position: 4189628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4189720:-1
position: 4189720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4174955-4175113:-1:exon

position:4174955:-1
position: 4174955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4175113:-1
position: 4175113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4150138-4150254:-1:exon

position:4150138:-1
position: 4150138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4150254:-1
position: 4150254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4147100-4147214:-1:exon

position:4147100:-1
position: 4147100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4147214:-1
position: 4147214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4143582-4146532:-1:exon

position:4146532:-1
position: 4146532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM171A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAM171A1
product: family with sequence similarity 171 member A1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031444582.1
SIO_010081: FAM171A1
subclass of: SO_0000673
so part of: FAM171A1
location: complement(join(4143582..4146532,4147100..4147214,4150138..4150254,4169894..4170070,4174955..4175113,4188624..4188683,4189628..4189720,4194921..4195148,4267008..4267134))
location: region:4143582-4267134:-1
so has part: feature:4267008-4267134:-1:exon
so has part: feature:4194921-4195148:-1:exon
so has part: feature:4189628-4189720:-1:exon
so has part: feature:4188624-4188683:-1:exon
so has part: feature:4174955-4175113:-1:exon
so has part: feature:4169894-4170070:-1:exon
so has part: feature:4150138-4150254:-1:exon
so has part: feature:4147100-4147214:-1:exon
so has part: feature:4143582-4146532:-1:exon

position:4267134:-1
position: 4267134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4267008-4267134:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4194921-4195148:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4189628-4189720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4188624-4188683:-1:exon

position:4188624:-1
position: 4188624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4188683:-1
position: 4188683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4174955-4175113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4169894-4170070:-1:exon

position:4169894:-1
position: 4169894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4170070:-1
position: 4170070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4150138-4150254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4147100-4147214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4143582-4146532:-1:exon

FAM171A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAM171A1
product: family with sequence similarity 171 member A1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_031444581.1
SIO_010081: FAM171A1
subclass of: SO_0000673
so part of: FAM171A1
location: complement(join(4143582..4146532,4147100..4147214,4150138..4150254,4174955..4175113,4189628..4189720,4194921..4195148,4205321..4205375))
location: region:4143582-4205375:-1
so has part: feature:4205321-4205375:-1:exon
so has part: feature:4194921-4195148:-1:exon
so has part: feature:4189628-4189720:-1:exon
so has part: feature:4174955-4175113:-1:exon
so has part: feature:4150138-4150254:-1:exon
so has part: feature:4147100-4147214:-1:exon
so has part: feature:4143582-4146532:-1:exon

position:4205375:-1
position: 4205375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4205321-4205375:-1:exon

position:4205321:-1
position: 4205321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4194921-4195148:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4189628-4189720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4174955-4175113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4150138-4150254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4147100-4147214:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4143582-4146532:-1:exon

FAM171A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAM171A1
product: family with sequence similarity 171 member A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_031444579.1
SIO_010081: FAM171A1
subclass of: SO_0000673
so part of: FAM171A1
location: complement(join(4143582..4146532,4147100..4147214,4150138..4150254,4169894..4170070,4174955..4175113,4189628..4189720,4194921..4195148,4205321..4205375))
location: region:4143582-4205375:-1
so has part: feature:4205321-4205375:-1:exon
so has part: feature:4194921-4195148:-1:exon
so has part: feature:4189628-4189720:-1:exon
so has part: feature:4174955-4175113:-1:exon
so has part: feature:4169894-4170070:-1:exon
so has part: feature:4150138-4150254:-1:exon
so has part: feature:4147100-4147214:-1:exon
so has part: feature:4143582-4146532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4205321-4205375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4194921-4195148:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4189628-4189720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4174955-4175113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4169894-4170070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4150138-4150254:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4147100-4147214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4143582-4146532:-1:exon

FAM171A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAM171A1
product: family with sequence similarity 171 member A1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031444580.1
SIO_010081: FAM171A1
subclass of: SO_0000673
so part of: FAM171A1
location: complement(join(4143582..4146532,4147100..4147214,4150138..4150254,4174955..4175113,4188624..4188683,4189628..4189720,4194921..4195148,4205321..4205375))
location: region:4143582-4205375:-1
so has part: feature:4205321-4205375:-1:exon
so has part: feature:4194921-4195148:-1:exon
so has part: feature:4189628-4189720:-1:exon
so has part: feature:4188624-4188683:-1:exon
so has part: feature:4174955-4175113:-1:exon
so has part: feature:4150138-4150254:-1:exon
so has part: feature:4147100-4147214:-1:exon
so has part: feature:4143582-4146532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4205321-4205375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4194921-4195148:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4189628-4189720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4188624-4188683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4174955-4175113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4150138-4150254:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4147100-4147214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4143582-4146532:-1:exon

FAM171A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAM171A1
product: family with sequence similarity 171 member A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_031444578.1
SIO_010081: FAM171A1
subclass of: SO_0000673
so part of: FAM171A1
location: complement(join(4143582..4146532,4147100..4147214,4150138..4150254,4169894..4170070,4174955..4175113,4188624..4188683,4189628..4189720,4194921..4195148,4205321..4205375))
location: region:4143582-4205375:-1
so has part: feature:4205321-4205375:-1:exon
so has part: feature:4194921-4195148:-1:exon
so has part: feature:4189628-4189720:-1:exon
so has part: feature:4188624-4188683:-1:exon
so has part: feature:4174955-4175113:-1:exon
so has part: feature:4169894-4170070:-1:exon
so has part: feature:4150138-4150254:-1:exon
so has part: feature:4147100-4147214:-1:exon
so has part: feature:4143582-4146532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4205321-4205375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4194921-4195148:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4189628-4189720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4188624-4188683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4174955-4175113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4169894-4170070:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4150138-4150254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4147100-4147214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4143582-4146532:-1:exon

FAM171A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAM171A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM171A1 isoform X4
translation: MANFHARHARRAKEVTLKVHVSDASTHQPIPDALIEIFTNQVSVASGTSGTDGIAFIKFQYKLGSQLIVTATKHAYVPNSAPWKPIRLPVFSSLSLGLLPERSATLMVYEDVVQIVSGFQGARPQPRVHFQRRALRLPENTSYSDLTAFLTAASSPSEVDGFPYLRGLDGNGTGTWLKSGLGLVHQEDSQLTWTYIAPQLGYWVAAMSPPSPGPVVTQDITTYHTVFLLAILGGMAFILLVLLCLLLYYCRRRCLKPRQHPRKLQLPATLESSKRDQSTSMSHINLLFSRRESEFPGPLSVTSQGRPDVPGSKELMGGVHLEVMSSSGEADMHTPMLKLSYSTSQEFSSREELLSHKEEDKSQISFDNLTPSGTLGKDYHKSVEIFPLKPRKSMEREGYESPGGSDYRRSYNAMLSQPLFEKQERDGQASVNHISTGSKLTIQEHKYPTPSSPEKEQLLDRRPTECMMSRSVDHLERPTSFPRPGQLICCSSVDQVNDSVYRKVLPALVIPAHYMKLPGDHSYVGQPLVVPSDQQLEIERLQAELSSPHAGIFPHPSSQTQAQPLSCQAISQQHLQDAGAREWAPQSASMSESLSIPASLNDAALAQMNSEVQLLTEKALLELGGGKPLPHPRAWFVSLDGRSNAHVRHSYIDLQRAGRNGSNDASLDSGVDMNEPKSARKGRGDPLSLPQSHPPVQEHPQKEPRAAESSTYTQLMYLDDMDQSGSECGTTVGTPEDSALRCLLDSSGRRSGGQLPSLQEETTKRTSDVPPEPTASPDQRRSAQEDEEDEEDDDDQGEDKKSPWQRREERPLMAFNIK
SIO_010081: FAM171A1
subclass of: SO_0000673
so part of: FAM171A1
location: complement(join(4144828..4146532,4147100..4147214,4150138..4150254,4174955..4175113,4189628..4189720,4194921..4195148,4205321..4205360))
location: region:4144828-4205360:-1
so has part: feature:4205321-4205360:-1:exon
so has part: feature:4194921-4195148:-1:exon
so has part: feature:4189628-4189720:-1:exon
so has part: feature:4174955-4175113:-1:exon
so has part: feature:4150138-4150254:-1:exon
so has part: feature:4147100-4147214:-1:exon
so has part: feature:4144828-4146532:-1:exon

XP_031300441.1
type: Protein
SIO_000068: ncbiprotein

position:4144828:-1
position: 4144828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4205360:-1
position: 4205360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4205321-4205360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4194921-4195148:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4189628-4189720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4174955-4175113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4150138-4150254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4147100-4147214:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4144828-4146532:-1:exon

FAM171A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAM171A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM171A1 isoform X2
translation: MANFHARHARRAKEVTLKVHVSDASTHQPIPDALIEIFTNQVSVASGTSGTDGIAFIKFQYKLGSQLIVTATKHAYVPNSAPWKPIRLPVFSSLSLGLLPERSATLMVYEDVVQIVSGFQGARPQPRVHFQRRALRLPENTSYSDLTAFLTAASSPSEVDGFPYLRGLDGNGTGNSTRYDLTPVTAVSVHLLSSDGTPVLVDGPIYVTVPLATQSNLRHNAYVTAWRFDQKLGTWLKSGLGLVHQEDSQLTWTYIAPQLGYWVAAMSPPSPGPVVTQDITTYHTVFLLAILGGMAFILLVLLCLLLYYCRRRCLKPRQHPRKLQLPATLESSKRDQSTSMSHINLLFSRRESEFPGPLSVTSQGRPDVPGSKELMGGVHLEVMSSSGEADMHTPMLKLSYSTSQEFSSREELLSHKEEDKSQISFDNLTPSGTLGKDYHKSVEIFPLKPRKSMEREGYESPGGSDYRRSYNAMLSQPLFEKQERDGQASVNHISTGSKLTIQEHKYPTPSSPEKEQLLDRRPTECMMSRSVDHLERPTSFPRPGQLICCSSVDQVNDSVYRKVLPALVIPAHYMKLPGDHSYVGQPLVVPSDQQLEIERLQAELSSPHAGIFPHPSSQTQAQPLSCQAISQQHLQDAGAREWAPQSASMSESLSIPASLNDAALAQMNSEVQLLTEKALLELGGGKPLPHPRAWFVSLDGRSNAHVRHSYIDLQRAGRNGSNDASLDSGVDMNEPKSARKGRGDPLSLPQSHPPVQEHPQKEPRAAESSTYTQLMYLDDMDQSGSECGTTVGTPEDSALRCLLDSSGRRSGGQLPSLQEETTKRTSDVPPEPTASPDQRRSAQEDEEDEEDDDDQGEDKKSPWQRREERPLMAFNIK
SIO_010081: FAM171A1
subclass of: SO_0000673
so part of: FAM171A1
location: complement(join(4144828..4146532,4147100..4147214,4150138..4150254,4169894..4170070,4174955..4175113,4189628..4189720,4194921..4195148,4205321..4205360))
location: region:4144828-4205360:-1
so has part: feature:4205321-4205360:-1:exon
so has part: feature:4194921-4195148:-1:exon
so has part: feature:4189628-4189720:-1:exon
so has part: feature:4174955-4175113:-1:exon
so has part: feature:4169894-4170070:-1:exon
so has part: feature:4150138-4150254:-1:exon
so has part: feature:4147100-4147214:-1:exon
so has part: feature:4144828-4146532:-1:exon

XP_031300439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4205321-4205360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4194921-4195148:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4189628-4189720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4174955-4175113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4169894-4170070:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4150138-4150254:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4147100-4147214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4144828-4146532:-1:exon

FAM171A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAM171A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM171A1 isoform X3
translation: MANFHARHARRAKEVTLKVHVSDASTHQPIPDALIEIFTNQVSVASGTSGTDGIAFIKFQYKLGSQLIVTATKHAYVPNSAPWKPIRLPVFSSLSLGLLPERSATLMVYEDVVQIVSGFQAVEKFTEVNMQLLLLEEVYEGARPQPRVHFQRRALRLPENTSYSDLTAFLTAASSPSEVDGFPYLRGLDGNGTGTWLKSGLGLVHQEDSQLTWTYIAPQLGYWVAAMSPPSPGPVVTQDITTYHTVFLLAILGGMAFILLVLLCLLLYYCRRRCLKPRQHPRKLQLPATLESSKRDQSTSMSHINLLFSRRESEFPGPLSVTSQGRPDVPGSKELMGGVHLEVMSSSGEADMHTPMLKLSYSTSQEFSSREELLSHKEEDKSQISFDNLTPSGTLGKDYHKSVEIFPLKPRKSMEREGYESPGGSDYRRSYNAMLSQPLFEKQERDGQASVNHISTGSKLTIQEHKYPTPSSPEKEQLLDRRPTECMMSRSVDHLERPTSFPRPGQLICCSSVDQVNDSVYRKVLPALVIPAHYMKLPGDHSYVGQPLVVPSDQQLEIERLQAELSSPHAGIFPHPSSQTQAQPLSCQAISQQHLQDAGAREWAPQSASMSESLSIPASLNDAALAQMNSEVQLLTEKALLELGGGKPLPHPRAWFVSLDGRSNAHVRHSYIDLQRAGRNGSNDASLDSGVDMNEPKSARKGRGDPLSLPQSHPPVQEHPQKEPRAAESSTYTQLMYLDDMDQSGSECGTTVGTPEDSALRCLLDSSGRRSGGQLPSLQEETTKRTSDVPPEPTASPDQRRSAQEDEEDEEDDDDQGEDKKSPWQRREERPLMAFNIK
SIO_010081: FAM171A1
subclass of: SO_0000673
so part of: FAM171A1
location: complement(join(4144828..4146532,4147100..4147214,4150138..4150254,4174955..4175113,4188624..4188683,4189628..4189720,4194921..4195148,4205321..4205360))
location: region:4144828-4205360:-1
so has part: feature:4205321-4205360:-1:exon
so has part: feature:4194921-4195148:-1:exon
so has part: feature:4189628-4189720:-1:exon
so has part: feature:4188624-4188683:-1:exon
so has part: feature:4174955-4175113:-1:exon
so has part: feature:4150138-4150254:-1:exon
so has part: feature:4147100-4147214:-1:exon
so has part: feature:4144828-4146532:-1:exon

XP_031300440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4205321-4205360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4194921-4195148:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4189628-4189720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4188624-4188683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4174955-4175113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4150138-4150254:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4147100-4147214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4144828-4146532:-1:exon

FAM171A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAM171A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM171A1 isoform X1
translation: MANFHARHARRAKEVTLKVHVSDASTHQPIPDALIEIFTNQVSVASGTSGTDGIAFIKFQYKLGSQLIVTATKHAYVPNSAPWKPIRLPVFSSLSLGLLPERSATLMVYEDVVQIVSGFQAVEKFTEVNMQLLLLEEVYEGARPQPRVHFQRRALRLPENTSYSDLTAFLTAASSPSEVDGFPYLRGLDGNGTGNSTRYDLTPVTAVSVHLLSSDGTPVLVDGPIYVTVPLATQSNLRHNAYVTAWRFDQKLGTWLKSGLGLVHQEDSQLTWTYIAPQLGYWVAAMSPPSPGPVVTQDITTYHTVFLLAILGGMAFILLVLLCLLLYYCRRRCLKPRQHPRKLQLPATLESSKRDQSTSMSHINLLFSRRESEFPGPLSVTSQGRPDVPGSKELMGGVHLEVMSSSGEADMHTPMLKLSYSTSQEFSSREELLSHKEEDKSQISFDNLTPSGTLGKDYHKSVEIFPLKPRKSMEREGYESPGGSDYRRSYNAMLSQPLFEKQERDGQASVNHISTGSKLTIQEHKYPTPSSPEKEQLLDRRPTECMMSRSVDHLERPTSFPRPGQLICCSSVDQVNDSVYRKVLPALVIPAHYMKLPGDHSYVGQPLVVPSDQQLEIERLQAELSSPHAGIFPHPSSQTQAQPLSCQAISQQHLQDAGAREWAPQSASMSESLSIPASLNDAALAQMNSEVQLLTEKALLELGGGKPLPHPRAWFVSLDGRSNAHVRHSYIDLQRAGRNGSNDASLDSGVDMNEPKSARKGRGDPLSLPQSHPPVQEHPQKEPRAAESSTYTQLMYLDDMDQSGSECGTTVGTPEDSALRCLLDSSGRRSGGQLPSLQEETTKRTSDVPPEPTASPDQRRSAQEDEEDEEDDDDQGEDKKSPWQRREERPLMAFNIK
SIO_010081: FAM171A1
subclass of: SO_0000673
so part of: FAM171A1
location: complement(join(4144828..4146532,4147100..4147214,4150138..4150254,4169894..4170070,4174955..4175113,4188624..4188683,4189628..4189720,4194921..4195148,4205321..4205360))
location: region:4144828-4205360:-1
so has part: feature:4205321-4205360:-1:exon
so has part: feature:4194921-4195148:-1:exon
so has part: feature:4189628-4189720:-1:exon
so has part: feature:4188624-4188683:-1:exon
so has part: feature:4174955-4175113:-1:exon
so has part: feature:4169894-4170070:-1:exon
so has part: feature:4150138-4150254:-1:exon
so has part: feature:4147100-4147214:-1:exon
so has part: feature:4144828-4146532:-1:exon

XP_031300438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4205321-4205360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4194921-4195148:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4189628-4189720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4188624-4188683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4174955-4175113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4169894-4170070:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4150138-4150254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4147100-4147214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4144828-4146532:-1:exon

FAM171A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAM171A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM171A1 isoform X6
translation: MVYEDVVQIVSGFQGARPQPRVHFQRRALRLPENTSYSDLTAFLTAASSPSEVDGFPYLRGLDGNGTGTWLKSGLGLVHQEDSQLTWTYIAPQLGYWVAAMSPPSPGPVVTQDITTYHTVFLLAILGGMAFILLVLLCLLLYYCRRRCLKPRQHPRKLQLPATLESSKRDQSTSMSHINLLFSRRESEFPGPLSVTSQGRPDVPGSKELMGGVHLEVMSSSGEADMHTPMLKLSYSTSQEFSSREELLSHKEEDKSQISFDNLTPSGTLGKDYHKSVEIFPLKPRKSMEREGYESPGGSDYRRSYNAMLSQPLFEKQERDGQASVNHISTGSKLTIQEHKYPTPSSPEKEQLLDRRPTECMMSRSVDHLERPTSFPRPGQLICCSSVDQVNDSVYRKVLPALVIPAHYMKLPGDHSYVGQPLVVPSDQQLEIERLQAELSSPHAGIFPHPSSQTQAQPLSCQAISQQHLQDAGAREWAPQSASMSESLSIPASLNDAALAQMNSEVQLLTEKALLELGGGKPLPHPRAWFVSLDGRSNAHVRHSYIDLQRAGRNGSNDASLDSGVDMNEPKSARKGRGDPLSLPQSHPPVQEHPQKEPRAAESSTYTQLMYLDDMDQSGSECGTTVGTPEDSALRCLLDSSGRRSGGQLPSLQEETTKRTSDVPPEPTASPDQRRSAQEDEEDEEDDDDQGEDKKSPWQRREERPLMAFNIK
SIO_010081: FAM171A1
subclass of: SO_0000673
so part of: FAM171A1
location: complement(join(4144828..4146532,4147100..4147214,4150138..4150254,4174955..4175113,4189628..4189670))
location: region:4144828-4189670:-1
so has part: feature:4189628-4189670:-1:exon
so has part: feature:4174955-4175113:-1:exon
so has part: feature:4150138-4150254:-1:exon
so has part: feature:4147100-4147214:-1:exon
so has part: feature:4144828-4146532:-1:exon

XP_031300443.1
type: Protein
SIO_000068: ncbiprotein

position:4189670:-1
position: 4189670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4189628-4189670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4174955-4175113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4150138-4150254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4147100-4147214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4144828-4146532:-1:exon

FAM171A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAM171A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM171A1 isoform X5
translation: MVYEDVVQIVSGFQAVEKFTEVNMQLLLLEEVYEGARPQPRVHFQRRALRLPENTSYSDLTAFLTAASSPSEVDGFPYLRGLDGNGTGNSTRYDLTPVTAVSVHLLSSDGTPVLVDGPIYVTVPLATQSNLRHNAYVTAWRFDQKLGTWLKSGLGLVHQEDSQLTWTYIAPQLGYWVAAMSPPSPGPVVTQDITTYHTVFLLAILGGMAFILLVLLCLLLYYCRRRCLKPRQHPRKLQLPATLESSKRDQSTSMSHINLLFSRRESEFPGPLSVTSQGRPDVPGSKELMGGVHLEVMSSSGEADMHTPMLKLSYSTSQEFSSREELLSHKEEDKSQISFDNLTPSGTLGKDYHKSVEIFPLKPRKSMEREGYESPGGSDYRRSYNAMLSQPLFEKQERDGQASVNHISTGSKLTIQEHKYPTPSSPEKEQLLDRRPTECMMSRSVDHLERPTSFPRPGQLICCSSVDQVNDSVYRKVLPALVIPAHYMKLPGDHSYVGQPLVVPSDQQLEIERLQAELSSPHAGIFPHPSSQTQAQPLSCQAISQQHLQDAGAREWAPQSASMSESLSIPASLNDAALAQMNSEVQLLTEKALLELGGGKPLPHPRAWFVSLDGRSNAHVRHSYIDLQRAGRNGSNDASLDSGVDMNEPKSARKGRGDPLSLPQSHPPVQEHPQKEPRAAESSTYTQLMYLDDMDQSGSECGTTVGTPEDSALRCLLDSSGRRSGGQLPSLQEETTKRTSDVPPEPTASPDQRRSAQEDEEDEEDDDDQGEDKKSPWQRREERPLMAFNIK
SIO_010081: FAM171A1
subclass of: SO_0000673
so part of: FAM171A1
location: complement(join(4144828..4146532,4147100..4147214,4150138..4150254,4169894..4170070,4174955..4175113,4188624..4188683,4189628..4189670))
location: region:4144828-4189670:-1
so has part: feature:4189628-4189670:-1:exon
so has part: feature:4188624-4188683:-1:exon
so has part: feature:4174955-4175113:-1:exon
so has part: feature:4169894-4170070:-1:exon
so has part: feature:4150138-4150254:-1:exon
so has part: feature:4147100-4147214:-1:exon
so has part: feature:4144828-4146532:-1:exon

XP_031300442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4189628-4189670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4188624-4188683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4174955-4175113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4169894-4170070:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4150138-4150254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4147100-4147214:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4144828-4146532:-1:exon

LOC105104531
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105104531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4313175..4315452)
location: region:4313175-4315452:-1
so has part: feature:4313175-4315452:-1:exon

105104531
type: Gene
SIO_000068: ncbigene

position:4313175:-1
position: 4313175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4315452:-1
position: 4315452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4313175-4315452:-1:exon

LOC105104531
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105104531
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105104531
subclass of: SO_0000673
so part of: LOC105104531
location: complement(4313175..4315452)
location: region:4313175-4315452:-1
so has part: feature:4313175-4315452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4313175-4315452:-1:exon

LOC105086663
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105086663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4347485..4359390)
location: region:4347485-4359390:-1
so has part: feature:4347485-4359390:-1:exon

105086663
type: Gene
SIO_000068: ncbigene

position:4347485:-1
position: 4347485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4359390:-1
position: 4359390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4347485-4359390:-1:exon

LOC105086663
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105086663
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC105086663
subclass of: SO_0000673
so part of: LOC105086663
location: complement(4347485..4347549)
location: region:4347485-4347549:-1
so has part: feature:4347485-4347549:-1:exon

position:4347549:-1
position: 4347549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4347485-4347549:-1:exon

LOC105086663
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105086663
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC105086663
subclass of: SO_0000673
so part of: LOC105086663
location: complement(4348812..4349138)
location: region:4348812-4349138:-1
so has part: feature:4348812-4349138:-1:exon

position:4348812:-1
position: 4348812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4349138:-1
position: 4349138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4348812-4349138:-1:exon

LOC105086663
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105086663
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC105086663
subclass of: SO_0000673
so part of: LOC105086663
location: complement(4357646..4358412)
location: region:4357646-4358412:-1
so has part: feature:4357646-4358412:-1:exon

position:4357646:-1
position: 4357646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4358412:-1
position: 4358412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4357646-4358412:-1:exon

LOC105086663
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105086663
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC105086663
subclass of: SO_0000673
so part of: LOC105086663
location: complement(4358680..4359390)
location: region:4358680-4359390:-1
so has part: feature:4358680-4359390:-1:exon

position:4358680:-1
position: 4358680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4358680-4359390:-1:exon

LOC105106700
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105106700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4467258..4470930
location: region:4467258-4470930:1
so has part: feature:4467258-4470930:1:exon
subclass of: SO_0000010

105106700
type: Gene
SIO_000068: ncbigene

position:4467258:1
position: 4467258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4470930:1
position: 4470930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4467258-4470930:1:exon

LOC105106700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105106700
product: insulin-like growth factor 1 receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031444483.1
SIO_010081: LOC105106700
subclass of: SO_0000673
so part of: LOC105106700
location: join(4467258..4467354,4470451..4470930)
location: region:4467258-4470930:1
so has part: feature:4467258-4467354:1:exon
so has part: feature:4470451-4470930:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4467258-4467354:1:exon

position:4467354:1
position: 4467354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4470451-4470930:1:exon

position:4470451:1
position: 4470451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105106700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105106700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor 1 receptor
translation: MAAGSETELWGAVPALITSGDEQDRTLLLWGSGREAMVAPEAAGPRPPFQRGPVCLSPRRCELMHMCWQYNPKMRPSFLETSSSIKDEMEPGFQEVSFYYSKENKPPEPEELDLEPENMESVPLDPLASSSSLLLSDRYSGHKAEKGPGPGVLVLRASFDERQPYAHMNGGRKNERALPLPQSSTCCSWS
SIO_010081: LOC105106700
subclass of: SO_0000673
so part of: LOC105106700
location: join(4467258..4467354,4470451..4470926)
location: region:4467258-4470926:1
so has part: feature:4467258-4467354:1:exon
so has part: feature:4470451-4470926:1:exon

XP_031300343.1
type: Protein
SIO_000068: ncbiprotein

position:4470926:1
position: 4470926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4467258-4467354:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4470451-4470926:1:exon

LOC105096297
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105096297
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4539847..4547184)
location: region:4539847-4547184:-1
so has part: feature:4539847-4547184:-1:exon
subclass of: SO_0000010

105096297
type: Gene
SIO_000068: ncbigene

position:4539847:-1
position: 4539847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4547184:-1
position: 4547184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4539847-4547184:-1:exon

LOC105096297
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105096297
product: lysozyme-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010988588.2
SIO_010081: LOC105096297
subclass of: SO_0000673
so part of: LOC105096297
location: complement(join(4539847..4540068,4540866..4540944,4546348..4546506,4546971..4547184))
location: region:4539847-4547184:-1
so has part: feature:4546971-4547184:-1:exon
so has part: feature:4546348-4546506:-1:exon
so has part: feature:4540866-4540944:-1:exon
so has part: feature:4539847-4540068:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4546971-4547184:-1:exon

position:4546971:-1
position: 4546971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4546348-4546506:-1:exon

position:4546348:-1
position: 4546348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4546506:-1
position: 4546506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4540866-4540944:-1:exon

position:4540866:-1
position: 4540866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4540944:-1
position: 4540944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4539847-4540068:-1:exon

position:4540068:-1
position: 4540068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105096297
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105096297
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysozyme-like protein 1
translation: MKAASILTLIGCLAMAAEPKVYTRCKLAKIFARANLDNYQGFTLGNWICMAYYESRYNTTAQTNLEDGSIDYGIFQINSYTWCRRGTLQERNHCHVACSALITDDLTDAIVCAKKIVKETEGMNYWQGWKKNCEGRDLSEWKRGCNVS
SIO_010081: LOC105096297
subclass of: SO_0000673
so part of: LOC105096297
location: complement(join(4539999..4540068,4540866..4540944,4546348..4546506,4546971..4547109))
location: region:4539999-4547109:-1
so has part: feature:4546971-4547109:-1:exon
so has part: feature:4546348-4546506:-1:exon
so has part: feature:4540866-4540944:-1:exon
so has part: feature:4539999-4540068:-1:exon

XP_010986890.1
type: Protein
SIO_000068: ncbiprotein

position:4539999:-1
position: 4539999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4547109:-1
position: 4547109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4546971-4547109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4546348-4546506:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4540866-4540944:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4539999-4540068:-1:exon

LOC116150445
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150445
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4573186..4575567
location: region:4573186-4575567:1
so has part: feature:4573186-4575567:1:exon
subclass of: SO_0000011

116150445
type: Gene
SIO_000068: ncbigene

position:4573186:1
position: 4573186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4575567:1
position: 4575567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4573186-4575567:1:exon

LOC116150445
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150445
product: uncharacterized LOC116150445
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004134179.1
SIO_010081: LOC116150445
subclass of: SO_0000673
so part of: LOC116150445
location: join(4573186..4573451,4573773..4574092,4575001..4575567)
location: region:4573186-4575567:1
so has part: feature:4573186-4573451:1:exon
so has part: feature:4573773-4574092:1:exon
so has part: feature:4575001-4575567:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4573186-4573451:1:exon

position:4573451:1
position: 4573451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4573773-4574092:1:exon

position:4573773:1
position: 4573773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4574092:1
position: 4574092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4575001-4575567:1:exon

position:4575001:1
position: 4575001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105096298
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105096298
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4592315..4616192)
location: region:4592315-4616192:-1
so has part: feature:4592315-4616192:-1:exon
subclass of: SO_0000011

105096298
type: Gene
SIO_000068: ncbigene

position:4592315:-1
position: 4592315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4616192:-1
position: 4616192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4592315-4616192:-1:exon

LOC105096298
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105096298
product: uncharacterized LOC105096298, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004134217.1
SIO_010081: LOC105096298
subclass of: SO_0000673
so part of: LOC105096298
location: complement(join(4592315..4593534,4593624..4596133,4597888..4598024,4598958..4600187,4602595..4602749,4609473..4610042,4615492..4616192))
location: region:4592315-4616192:-1
so has part: feature:4615492-4616192:-1:exon
so has part: feature:4609473-4610042:-1:exon
so has part: feature:4602595-4602749:-1:exon
so has part: feature:4598958-4600187:-1:exon
so has part: feature:4597888-4598024:-1:exon
so has part: feature:4593624-4596133:-1:exon
so has part: feature:4592315-4593534:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4615492-4616192:-1:exon

position:4615492:-1
position: 4615492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4609473-4610042:-1:exon

position:4609473:-1
position: 4609473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4610042:-1
position: 4610042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4602595-4602749:-1:exon

position:4602595:-1
position: 4602595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4602749:-1
position: 4602749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4598958-4600187:-1:exon

position:4598958:-1
position: 4598958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4600187:-1
position: 4600187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4597888-4598024:-1:exon

position:4597888:-1
position: 4597888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4598024:-1
position: 4598024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4593624-4596133:-1:exon

position:4593624:-1
position: 4593624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4596133:-1
position: 4596133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4592315-4593534:-1:exon

position:4593534:-1
position: 4593534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105096298
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105096298
product: uncharacterized LOC105096298, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004134218.1
SIO_010081: LOC105096298
subclass of: SO_0000673
so part of: LOC105096298
location: complement(join(4592316..4593534,4593624..4596133,4597888..4597985,4598958..4599346,4602595..4602749,4609473..4610042,4615492..4616189))
location: region:4592316-4616189:-1
so has part: feature:4615492-4616189:-1:exon
so has part: feature:4609473-4610042:-1:exon
so has part: feature:4602595-4602749:-1:exon
so has part: feature:4598958-4599346:-1:exon
so has part: feature:4597888-4597985:-1:exon
so has part: feature:4593624-4596133:-1:exon
so has part: feature:4592316-4593534:-1:exon

position:4592316:-1
position: 4592316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4616189:-1
position: 4616189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4615492-4616189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4609473-4610042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4602595-4602749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4598958-4599346:-1:exon

position:4599346:-1
position: 4599346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4597888-4597985:-1:exon

position:4597985:-1
position: 4597985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4593624-4596133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4592316-4593534:-1:exon

LOC105096298
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105096298
product: uncharacterized LOC105096298, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_837828.2
SIO_010081: LOC105096298
subclass of: SO_0000673
so part of: LOC105096298
location: complement(join(4592316..4593534,4593624..4596133,4597888..4598024,4598958..4599346,4602595..4602749,4609473..4610042,4615492..4616189))
location: region:4592316-4616189:-1
so has part: feature:4615492-4616189:-1:exon
so has part: feature:4609473-4610042:-1:exon
so has part: feature:4602595-4602749:-1:exon
so has part: feature:4598958-4599346:-1:exon
so has part: feature:4597888-4598024:-1:exon
so has part: feature:4593624-4596133:-1:exon
so has part: feature:4592316-4593534:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4615492-4616189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4609473-4610042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4602595-4602749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4598958-4599346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4597888-4598024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4593624-4596133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4592316-4593534:-1:exon

LOC116150494
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150494
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4642087..4655887)
location: region:4642087-4655887:-1
so has part: feature:4642087-4655887:-1:exon
subclass of: SO_0000011

116150494
type: Gene
SIO_000068: ncbigene

position:4642087:-1
position: 4642087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4655887:-1
position: 4655887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4642087-4655887:-1:exon

LOC116150494
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150494
product: uncharacterized LOC116150494, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004134222.1
SIO_010081: LOC116150494
subclass of: SO_0000673
so part of: LOC116150494
location: complement(join(4642087..4642574,4642992..4643136,4647925..4648066,4649744..4649888,4655613..4655887))
location: region:4642087-4655887:-1
so has part: feature:4655613-4655887:-1:exon
so has part: feature:4649744-4649888:-1:exon
so has part: feature:4647925-4648066:-1:exon
so has part: feature:4642992-4643136:-1:exon
so has part: feature:4642087-4642574:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4655613-4655887:-1:exon

position:4655613:-1
position: 4655613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4649744-4649888:-1:exon

position:4649744:-1
position: 4649744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4649888:-1
position: 4649888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4647925-4648066:-1:exon

position:4647925:-1
position: 4647925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4648066:-1
position: 4648066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4642992-4643136:-1:exon

position:4642992:-1
position: 4642992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4643136:-1
position: 4643136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4642087-4642574:-1:exon

position:4642574:-1
position: 4642574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116150494
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150494
product: uncharacterized LOC116150494, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004134221.1
SIO_010081: LOC116150494
subclass of: SO_0000673
so part of: LOC116150494
location: complement(join(4645856..4648066,4649744..4649888,4655606..4655883))
location: region:4645856-4655883:-1
so has part: feature:4655606-4655883:-1:exon
so has part: feature:4649744-4649888:-1:exon
so has part: feature:4645856-4648066:-1:exon

position:4645856:-1
position: 4645856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4655883:-1
position: 4655883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4655606-4655883:-1:exon

position:4655606:-1
position: 4655606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4649744-4649888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4645856-4648066:-1:exon

LOC116150494
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150494
product: uncharacterized LOC116150494, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004134219.1
SIO_010081: LOC116150494
subclass of: SO_0000673
so part of: LOC116150494
location: complement(join(4645856..4648066,4649744..4649888,4655613..4655875))
location: region:4645856-4655875:-1
so has part: feature:4655613-4655875:-1:exon
so has part: feature:4649744-4649888:-1:exon
so has part: feature:4645856-4648066:-1:exon

position:4655875:-1
position: 4655875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4655613-4655875:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4649744-4649888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4645856-4648066:-1:exon

LOC116150495
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150495
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4810595..4831836)
location: region:4810595-4831836:-1
so has part: feature:4810595-4831836:-1:exon
subclass of: SO_0000010

116150495
type: Gene
SIO_000068: ncbigene

position:4810595:-1
position: 4810595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4831836:-1
position: 4831836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4810595-4831836:-1:exon

LOC116150495
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC116150495
product: translation initiation factor IF-2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031444585.1
SIO_010081: LOC116150495
subclass of: SO_0000673
so part of: LOC116150495
location: complement(join(4810595..4810607,4815208..4815213,4831022..4831836))
location: region:4810595-4831836:-1
so has part: feature:4831022-4831836:-1:exon
so has part: feature:4815208-4815213:-1:exon
so has part: feature:4810595-4810607:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4831022-4831836:-1:exon

position:4831022:-1
position: 4831022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4815208-4815213:-1:exon

position:4815208:-1
position: 4815208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4815213:-1
position: 4815213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4810595-4810607:-1:exon

position:4810607:-1
position: 4810607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116150495
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC116150495
product: translation initiation factor IF-2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031444584.1
SIO_010081: LOC116150495
subclass of: SO_0000673
so part of: LOC116150495
location: complement(join(4829618..4830047,4831022..4831836))
location: region:4829618-4831836:-1
so has part: feature:4831022-4831836:-1:exon
so has part: feature:4829618-4830047:-1:exon

position:4829618:-1
position: 4829618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4831022-4831836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4829618-4830047:-1:exon

position:4830047:-1
position: 4830047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116150495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC116150495
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116150495
translation: MLAFKNLSFNKSDHIQMLEVSFSPFLYPIPFFASKEVTVILKSVLFYFPSCFFFRQSRGLGRVGLRRKDEGRVPLPISEKLPKGQRRAHLPPPRAAANHSNRPRQEVPGARDWLSRTSAPGRGRPPRSGRGSRPHAGAAGPAPLLRMRAVPRGKSLRTPPPGLRLAPRLPPLSAEACRLGETARAAAGRGLCGPKAAAVAPACGKCHQAALRVVARVTAVPRPPIPEPPATAGEEPARAVSTAPRRFGGNEADGRLCRLRP
SIO_010081: LOC116150495
subclass of: SO_0000673
so part of: LOC116150495
location: complement(4831023..4831808)
location: region:4831023-4831808:-1
so has part: feature:4831023-4831808:-1:exon

XP_031300444.1
type: Protein
SIO_000068: ncbiprotein

position:4831023:-1
position: 4831023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4831808:-1
position: 4831808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4831023-4831808:-1:exon

LOC116150495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC116150495
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116150495
translation: MLAFKNLSFNKSDHIQMLEVSFSPFLYPIPFFASKEVTVILKSVLFYFPSCFFFRQSRGLGRVGLRRKDEGRVPLPISEKLPKGQRRAHLPPPRAAANHSNRPRQEVPGARDWLSRTSAPGRGRPPRSGRGSRPHAGAAGPAPLLRMRAVPRGKSLRTPPPGLRLAPRLPPLSAEACRLGETARAAAGRGLCGPKAAAVAPACGKCHQAALRVVARVTAVPRPPIPEPPATAGEEPARAVSTAPRRFGGNEADGRLCRLRP
SIO_010081: LOC116150495
subclass of: SO_0000673
so part of: LOC116150495
location: complement(4831023..4831808)
location: region:4831023-4831808:-1
so has part: feature:4831023-4831808:-1:exon

XP_031300445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4831023-4831808:-1:exon

LOC105096299
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105096299
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4924155..4924953
location: region:4924155-4924953:1
so has part: feature:4924155-4924953:1:exon

105096299
type: Gene
SIO_000068: ncbigene

position:4924155:1
position: 4924155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4924953:1
position: 4924953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4924155-4924953:1:exon

LOC105096299
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105096299
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105096299
subclass of: SO_0000673
so part of: LOC105096299
location: 4924155..4924953
location: region:4924155-4924953:1
so has part: feature:4924155-4924953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4924155-4924953:1:exon

BAMBI
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: BAMBI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4979378..4986442)
location: region:4979378-4986442:-1
so has part: feature:4979378-4986442:-1:exon
subclass of: SO_0000010

105096300
type: Gene
SIO_000068: ncbigene

position:4979378:-1
position: 4979378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4986442:-1
position: 4986442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4979378-4986442:-1:exon

BAMBI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BAMBI
product: BMP and activin membrane bound inhibitor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_031444587.1
SIO_010081: BAMBI
subclass of: SO_0000673
so part of: BAMBI
location: complement(join(4979378..4981452,4981880..4982167,4985450..4985776))
location: region:4979378-4985776:-1
so has part: feature:4985450-4985776:-1:exon
so has part: feature:4981880-4982167:-1:exon
so has part: feature:4979378-4981452:-1:exon

position:4985776:-1
position: 4985776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4985450-4985776:-1:exon

position:4985450:-1
position: 4985450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4981880-4982167:-1:exon

position:4981880:-1
position: 4981880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4982167:-1
position: 4982167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4979378-4981452:-1:exon

position:4981452:-1
position: 4981452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAA-GGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAA-GGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(4980128..4980199)
location: region:4980128-4980199:-1
so has part: feature:4980128-4980199:-1:exon
subclass of: SO_0000663

116150618
type: Gene
SIO_000068: ncbigene

position:4980128:-1
position: 4980128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4980199:-1
position: 4980199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4980128-4980199:-1:exon

TRNAA-GGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAA-GGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon GGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(4980165..4980167),aa:Ala, seq:ggc)
SIO_010081: TRNAA-GGC
subclass of: SO_0000673
so part of: TRNAA-GGC
location: complement(4980128..4980199)
location: region:4980128-4980199:-1
so has part: feature:4980128-4980199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4980128-4980199:-1:exon

BAMBI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BAMBI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BMP and activin membrane-bound inhibitor homolog isoform X2
translation: MDRHSSYIFIWLQLELCAMAVLLTKGEIRCYCDAAHCVATGYMCKSELSACFSRLLDPQNTNSPLTHGCLDFLASTADACQAKQARNHSGTTVPTLGCCHEDMCNYRGLQDVLAPPRGDASGQGNRYQPDGSRNLITKVQELTSSKELWFRAAVIAVPIAGGLILVLLIMLALRMLRSENRRLRDQRQQMLSRLHYSFHGHHSRKGQVAKLDLECMVPASGHENCCLSCDKMRQADLGHERILSLVHWGMYSGHGKLEFV
SIO_010081: BAMBI
subclass of: SO_0000673
so part of: BAMBI
location: complement(join(4981034..4981452,4981880..4982167,4985450..4985525))
location: region:4981034-4985525:-1
so has part: feature:4985450-4985525:-1:exon
so has part: feature:4981880-4982167:-1:exon
so has part: feature:4981034-4981452:-1:exon

XP_031300447.1
type: Protein
SIO_000068: ncbiprotein

position:4981034:-1
position: 4981034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4985525:-1
position: 4985525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4985450-4985525:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4981880-4982167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4981034-4981452:-1:exon

BAMBI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BAMBI
product: BMP and activin membrane bound inhibitor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_031444586.1
SIO_010081: BAMBI
subclass of: SO_0000673
so part of: BAMBI
location: complement(join(4981962..4982167,4985450..4986442))
location: region:4981962-4986442:-1
so has part: feature:4985450-4986442:-1:exon
so has part: feature:4981962-4982167:-1:exon

position:4981962:-1
position: 4981962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4985450-4986442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4981962-4982167:-1:exon

BAMBI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BAMBI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BMP and activin membrane-bound inhibitor homolog isoform X1
translation: MRGGGGGRLKAPQGSAAPLPASRLDALFGRTRPGGARLGSATGPRLPRRGGEGSEGGHAGPSRVSGEQKGSHALEDAGQRPSCEDHGGGSQRQRLARPAAPEGHGRTGLREGERGRRRAPARSPRRRRRSEPRGRARLTSVWARSPAAGLSDRSLAANRAAPALPGRDWGGAGRGGAGRLPARGAIYGAEPGRPRPAQAGVRGGQFLCARGLRLRGLAGRGGAERSLEPTRPPAAPSGARSRDCRVGRCSARPPAALHAPAAARSRAPGSTHALHAPGAVGCSCAAAPGASGATAAVGGRQWIATPATSSSGCSSNSALWPCCSPKVKSDATVMPPTAWLLVICVNLS
SIO_010081: BAMBI
subclass of: SO_0000673
so part of: BAMBI
location: complement(join(4982099..4982167,4985450..4986427))
location: region:4982099-4986427:-1
so has part: feature:4985450-4986427:-1:exon
so has part: feature:4982099-4982167:-1:exon

XP_031300446.1
type: Protein
SIO_000068: ncbiprotein

position:4982099:-1
position: 4982099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4986427:-1
position: 4986427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4985450-4986427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4982099-4982167:-1:exon

WAC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: WAC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5014467..5088949)
location: region:5014467-5088949:-1
so has part: feature:5014467-5088949:-1:exon
subclass of: SO_0000010

105096303
type: Gene
SIO_000068: ncbigene

position:5014467:-1
position: 5014467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5088949:-1
position: 5088949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5014467-5088949:-1:exon

WAC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: WAC
product: WW domain containing adaptor with coiled-coil, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_031444593.1
SIO_010081: WAC
subclass of: SO_0000673
so part of: WAC
location: complement(join(5014467..5015927,5017529..5017656,5018404..5018590,5020024..5020142,5021104..5021252,5022107..5022229,5034183..5034491,5038737..5038849,5039399..5039514,5045446..5045552,5086074..5086287,5087787..5087823,5088243..5088712))
location: region:5014467-5088712:-1
so has part: feature:5088243-5088712:-1:exon
so has part: feature:5087787-5087823:-1:exon
so has part: feature:5086074-5086287:-1:exon
so has part: feature:5045446-5045552:-1:exon
so has part: feature:5039399-5039514:-1:exon
so has part: feature:5038737-5038849:-1:exon
so has part: feature:5034183-5034491:-1:exon
so has part: feature:5022107-5022229:-1:exon
so has part: feature:5021104-5021252:-1:exon
so has part: feature:5020024-5020142:-1:exon
so has part: feature:5018404-5018590:-1:exon
so has part: feature:5017529-5017656:-1:exon
so has part: feature:5014467-5015927:-1:exon

position:5088712:-1
position: 5088712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5088243-5088712:-1:exon

position:5088243:-1
position: 5088243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5087787-5087823:-1:exon

position:5087787:-1
position: 5087787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5087823:-1
position: 5087823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5086074-5086287:-1:exon

position:5086074:-1
position: 5086074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5086287:-1
position: 5086287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5045446-5045552:-1:exon

position:5045446:-1
position: 5045446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5045552:-1
position: 5045552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5039399-5039514:-1:exon

position:5039399:-1
position: 5039399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5039514:-1
position: 5039514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5038737-5038849:-1:exon

position:5038737:-1
position: 5038737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5038849:-1
position: 5038849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5034183-5034491:-1:exon

position:5034183:-1
position: 5034183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5034491:-1
position: 5034491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5022107-5022229:-1:exon

position:5022107:-1
position: 5022107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5022229:-1
position: 5022229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5021104-5021252:-1:exon

position:5021104:-1
position: 5021104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5021252:-1
position: 5021252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5020024-5020142:-1:exon

position:5020024:-1
position: 5020024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5020142:-1
position: 5020142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5018404-5018590:-1:exon

position:5018404:-1
position: 5018404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5018590:-1
position: 5018590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5017529-5017656:-1:exon

position:5017529:-1
position: 5017529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5017656:-1
position: 5017656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5014467-5015927:-1:exon

position:5015927:-1
position: 5015927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WAC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: WAC
product: WW domain containing adaptor with coiled-coil, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_031444589.1
SIO_010081: WAC
subclass of: SO_0000673
so part of: WAC
location: complement(join(5014467..5015927,5017529..5017656,5018404..5018587,5020024..5020142,5021104..5021252,5022107..5022229,5023648..5023893,5034183..5034491,5038737..5038849,5039399..5039514,5045446..5045552,5086074..5086287,5087787..5087823,5088243..5088711))
location: region:5014467-5088711:-1
so has part: feature:5088243-5088711:-1:exon
so has part: feature:5087787-5087823:-1:exon
so has part: feature:5086074-5086287:-1:exon
so has part: feature:5045446-5045552:-1:exon
so has part: feature:5039399-5039514:-1:exon
so has part: feature:5038737-5038849:-1:exon
so has part: feature:5034183-5034491:-1:exon
so has part: feature:5023648-5023893:-1:exon
so has part: feature:5022107-5022229:-1:exon
so has part: feature:5021104-5021252:-1:exon
so has part: feature:5020024-5020142:-1:exon
so has part: feature:5018404-5018587:-1:exon
so has part: feature:5017529-5017656:-1:exon
so has part: feature:5014467-5015927:-1:exon

position:5088711:-1
position: 5088711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5088243-5088711:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5087787-5087823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5086074-5086287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5045446-5045552:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5039399-5039514:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5038737-5038849:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5034183-5034491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5023648-5023893:-1:exon

position:5023648:-1
position: 5023648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5023893:-1
position: 5023893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5022107-5022229:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5021104-5021252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5020024-5020142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5018404-5018587:-1:exon

position:5018587:-1
position: 5018587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5017529-5017656:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5014467-5015927:-1:exon

WAC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: WAC
product: WW domain containing adaptor with coiled-coil, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_031444588.1
SIO_010081: WAC
subclass of: SO_0000673
so part of: WAC
location: complement(join(5014467..5015927,5017529..5017656,5018404..5018590,5020024..5020142,5021104..5021252,5022107..5022229,5023648..5023893,5034183..5034491,5038737..5038849,5039399..5039514,5045446..5045552,5086074..5086287,5087787..5087823,5088243..5088710))
location: region:5014467-5088710:-1
so has part: feature:5088243-5088710:-1:exon
so has part: feature:5087787-5087823:-1:exon
so has part: feature:5086074-5086287:-1:exon
so has part: feature:5045446-5045552:-1:exon
so has part: feature:5039399-5039514:-1:exon
so has part: feature:5038737-5038849:-1:exon
so has part: feature:5034183-5034491:-1:exon
so has part: feature:5023648-5023893:-1:exon
so has part: feature:5022107-5022229:-1:exon
so has part: feature:5021104-5021252:-1:exon
so has part: feature:5020024-5020142:-1:exon
so has part: feature:5018404-5018590:-1:exon
so has part: feature:5017529-5017656:-1:exon
so has part: feature:5014467-5015927:-1:exon

position:5088710:-1
position: 5088710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5088243-5088710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5087787-5087823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5086074-5086287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5045446-5045552:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5039399-5039514:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5038737-5038849:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5034183-5034491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5023648-5023893:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5022107-5022229:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5021104-5021252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5020024-5020142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5018404-5018590:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5017529-5017656:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5014467-5015927:-1:exon

WAC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: WAC
product: WW domain containing adaptor with coiled-coil, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_031444591.1
SIO_010081: WAC
subclass of: SO_0000673
so part of: WAC
location: complement(join(5014467..5015927,5017529..5017656,5018404..5018590,5020024..5020142,5021104..5021252,5022107..5022229,5023648..5023893,5034183..5034491,5038737..5038849,5039399..5039514,5045446..5045552,5086074..5086269,5087787..5087823,5088243..5088709))
location: region:5014467-5088709:-1
so has part: feature:5088243-5088709:-1:exon
so has part: feature:5087787-5087823:-1:exon
so has part: feature:5086074-5086269:-1:exon
so has part: feature:5045446-5045552:-1:exon
so has part: feature:5039399-5039514:-1:exon
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position:5088709:-1
position: 5088709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5088243-5088709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5087787-5087823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5086074-5086269:-1:exon

position:5086269:-1
position: 5086269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5045446-5045552:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5039399-5039514:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5038737-5038849:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5034183-5034491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5023648-5023893:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5022107-5022229:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5021104-5021252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5020024-5020142:-1:exon