Camelus dromedarius isolate Drom800 breed African chromosome 34, CamDro3, whole genome shotgun sequence.
type: Entry
definition: Camelus dromedarius isolate Drom800 breed African chromosome 34, CamDro3, whole genome shotgun sequence.
sequence version: NC_044544.1
sequence date: 2019-10-23
sequence: sequence
division: CON
label: NC_044544.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA565028
dblink: SAMN03252735
keyword: WGS
keyword: RefSeq
source: Camelus dromedarius (Arabian camel)
organism: Camelus dromedarius
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Tylopoda; Camelidae; Camelus.
reference: 1
references: 30972949
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016660.2.\nAssembly name: CamDro3\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vetmeduni Vienna on\n2019/10/07. The original whole-genome shotgun project has the\naccession JWIN00000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vetmeduni Vienna\nAssembly Date :: FEB-2019\nAssembly Method :: ABySS v. 1.3.6; HiRise v. MAY-2017;\n PBJelly v. 15.8.24; Pilon v. 1.22; ABySS\n Sealer v. 2.0.2; HiRise v. MAY-2018;\n PBJelly v. 15.8.24; BBMAP-CallVariants v.\n 38.12; ABySS Sealer v. 2.1.0\nAssembly Name :: CamDro3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 65.0x\nSequencing Technology :: Illumina HiSeq; Dovetail Hi-C and\n Chicago; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camelus dromedarius Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 22483259
topology: linear
so has quality: SO_0000987
location: 1..22483259
location: region:1-22483259:1
RO_0002162: 9838

NC_044544
type: RefSeq
SIO_000068: refseq

PRJNA565028
type: BioProject
SIO_000068: bioproject

SAMN03252735
type: BioSample
SIO_000068: biosample

1
title: Improving Illumina assemblies with Hi-C and long reads: An example with the North African dromedary
author: Elbers, J.P.
author: Rogers, M.F.
author: Perelman, P.L.
author: Proskuryakova, A.A.
author: Serdyukova, N.A.
author: Johnson, W.E.
author: Horin, P.
author: Corander, J.
author: Murphy, D.
author: Burger, P.A.
journal: Mol Ecol Resour
volume: 19
issue: 4
pages: 1015-1026
year: 2019
pubmed: 30972949

30972949
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22483259:1
position: 22483259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-22483259:1:source
so part of: sequence
organism: Camelus dromedarius
mol type: genomic DNA
isolate: Drom800
isolation source: isolated from an animal called Varis
chromosome: 34
sex: female
tissue type: blood
dev stage: adult
country: Austria: Eithental
collection date: 13-Jan-2013
collected by: Pamela Burger
breed: African

9838
type: Taxonomy
SIO_000068: taxonomy

LOC116150306
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150306
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14571..17612
location: region:14571-17612:1
so has part: feature:14571-17612:1:exon
subclass of: SO_0000011

116150306
type: Gene
SIO_000068: ncbigene

position:14571:1
position: 14571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17612:1
position: 17612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14571-17612:1:exon

LOC116150306
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150306
product: uncharacterized LOC116150306
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004133991.1
SIO_010081: LOC116150306
subclass of: SO_0000673
so part of: LOC116150306
location: join(14571..14642,15861..17612)
location: region:14571-17612:1
so has part: feature:14571-14642:1:exon
so has part: feature:15861-17612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14571-14642:1:exon

position:14642:1
position: 14642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15861-17612:1:exon

position:15861:1
position: 15861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116150290
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 44983..50219
location: region:44983-50219:1
so has part: feature:44983-50219:1:exon

116150290
type: Gene
SIO_000068: ncbigene

position:44983:1
position: 44983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50219:1
position: 50219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44983-50219:1:exon

LOC116150290
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150290
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116150290
subclass of: SO_0000673
so part of: LOC116150290
location: 44983..45022
location: region:44983-45022:1
so has part: feature:44983-45022:1:exon

position:45022:1
position: 45022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44983-45022:1:exon

LOC116150290
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150290
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116150290
subclass of: SO_0000673
so part of: LOC116150290
location: 47038..48155
location: region:47038-48155:1
so has part: feature:47038-48155:1:exon

position:47038:1
position: 47038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48155:1
position: 48155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47038-48155:1:exon

LOC116150290
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150290
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116150290
subclass of: SO_0000673
so part of: LOC116150290
location: 49613..50219
location: region:49613-50219:1
so has part: feature:49613-50219:1:exon

position:49613:1
position: 49613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49613-50219:1:exon

LOC116150291
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(97269..99028)
location: region:97269-99028:-1
so has part: feature:97269-99028:-1:exon

116150291
type: Gene
SIO_000068: ncbigene

position:97269:-1
position: 97269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99028:-1
position: 99028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97269-99028:-1:exon

LOC116150291
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150291
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 40% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116150291
subclass of: SO_0000673
so part of: LOC116150291
location: complement(97269..97501)
location: region:97269-97501:-1
so has part: feature:97269-97501:-1:exon

position:97501:-1
position: 97501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97269-97501:-1:exon

LOC116150291
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150291
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 40% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116150291
subclass of: SO_0000673
so part of: LOC116150291
location: complement(97599..98512)
location: region:97599-98512:-1
so has part: feature:97599-98512:-1:exon

position:97599:-1
position: 97599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98512:-1
position: 98512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97599-98512:-1:exon

LOC116150292
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(98512..115599)
location: region:98512-115599:-1
so has part: feature:98512-115599:-1:exon

116150292
type: Gene
SIO_000068: ncbigene

position:115599:-1
position: 115599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98512-115599:-1:exon

LOC116150292
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150292
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116150292
subclass of: SO_0000673
so part of: LOC116150292
location: complement(98512..100197)
location: region:98512-100197:-1
so has part: feature:98512-100197:-1:exon

position:100197:-1
position: 100197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98512-100197:-1:exon

LOC116150291
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150291
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 40% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116150291
subclass of: SO_0000673
so part of: LOC116150291
location: complement(98888..99028)
location: region:98888-99028:-1
so has part: feature:98888-99028:-1:exon

position:98888:-1
position: 98888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98888-99028:-1:exon

LOC116150292
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150292
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116150292
subclass of: SO_0000673
so part of: LOC116150292
location: complement(115061..115253)
location: region:115061-115253:-1
so has part: feature:115061-115253:-1:exon

position:115061:-1
position: 115061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115253:-1
position: 115253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115061-115253:-1:exon

LOC116150292
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150292
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116150292
subclass of: SO_0000673
so part of: LOC116150292
location: complement(115574..115599)
location: region:115574-115599:-1
so has part: feature:115574-115599:-1:exon

position:115574:-1
position: 115574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115574-115599:-1:exon

LOC116150307
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 115917..121390
location: region:115917-121390:1
so has part: feature:115917-121390:1:exon
subclass of: SO_0000011

116150307
type: Gene
SIO_000068: ncbigene

position:115917:1
position: 115917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121390:1
position: 121390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115917-121390:1:exon

LOC116150307
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150307
product: uncharacterized LOC116150307
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004133992.1
SIO_010081: LOC116150307
subclass of: SO_0000673
so part of: LOC116150307
location: join(115917..115967,121334..121390)
location: region:115917-121390:1
so has part: feature:115917-115967:1:exon
so has part: feature:121334-121390:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115917-115967:1:exon

position:115967:1
position: 115967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121334-121390:1:exon

position:121334:1
position: 121334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116150293
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150293
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(149964..152471)
location: region:149964-152471:-1
so has part: feature:149964-152471:-1:exon

116150293
type: Gene
SIO_000068: ncbigene

position:149964:-1
position: 149964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152471:-1
position: 152471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149964-152471:-1:exon

LOC116150293
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150293
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116150293
subclass of: SO_0000673
so part of: LOC116150293
location: complement(149964..152471)
location: region:149964-152471:-1
so has part: feature:149964-152471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:149964-152471:-1:exon

LOC116150317
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150317
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 185086..186436
location: region:185086-186436:1
so has part: feature:185086-186436:1:exon
subclass of: SO_0000011

116150317
type: Gene
SIO_000068: ncbigene

position:185086:1
position: 185086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186436:1
position: 186436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185086-186436:1:exon

LOC116150317
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150317
product: uncharacterized LOC116150317
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004134000.1
SIO_010081: LOC116150317
subclass of: SO_0000673
so part of: LOC116150317
location: join(185086..185142,185232..185346,186370..186436)
location: region:185086-186436:1
so has part: feature:185086-185142:1:exon
so has part: feature:185232-185346:1:exon
so has part: feature:186370-186436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185086-185142:1:exon

position:185142:1
position: 185142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185232-185346:1:exon

position:185232:1
position: 185232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185346:1
position: 185346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:186370-186436:1:exon

position:186370:1
position: 186370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116150294
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150294
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(225878..255655)
location: region:225878-255655:-1
so has part: feature:225878-255655:-1:exon

116150294
type: Gene
SIO_000068: ncbigene

position:225878:-1
position: 225878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255655:-1
position: 255655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225878-255655:-1:exon

LOC116150294
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150294
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC116150294
subclass of: SO_0000673
so part of: LOC116150294
location: complement(225878..226724)
location: region:225878-226724:-1
so has part: feature:225878-226724:-1:exon

position:226724:-1
position: 226724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225878-226724:-1:exon

LOC116150294
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150294
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC116150294
subclass of: SO_0000673
so part of: LOC116150294
location: complement(228878..229375)
location: region:228878-229375:-1
so has part: feature:228878-229375:-1:exon

position:228878:-1
position: 228878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229375:-1
position: 229375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228878-229375:-1:exon

LOC116150294
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150294
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC116150294
subclass of: SO_0000673
so part of: LOC116150294
location: complement(254756..254882)
location: region:254756-254882:-1
so has part: feature:254756-254882:-1:exon

position:254756:-1
position: 254756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254882:-1
position: 254882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254756-254882:-1:exon

LOC116150294
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150294
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC116150294
subclass of: SO_0000673
so part of: LOC116150294
location: complement(255572..255655)
location: region:255572-255655:-1
so has part: feature:255572-255655:-1:exon

position:255572:-1
position: 255572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255572-255655:-1:exon

LOC116150295
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150295
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(255885..257219)
location: region:255885-257219:-1
so has part: feature:255885-257219:-1:exon

116150295
type: Gene
SIO_000068: ncbigene

position:255885:-1
position: 255885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257219:-1
position: 257219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255885-257219:-1:exon

LOC116150295
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150295
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116150295
subclass of: SO_0000673
so part of: LOC116150295
location: complement(255885..257219)
location: region:255885-257219:-1
so has part: feature:255885-257219:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255885-257219:-1:exon

LOC116150296
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150296
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 283208..283678
location: region:283208-283678:1
so has part: feature:283208-283678:1:exon

116150296
type: Gene
SIO_000068: ncbigene

position:283208:1
position: 283208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283678:1
position: 283678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283208-283678:1:exon

LOC116150296
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150296
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 59% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116150296
subclass of: SO_0000673
so part of: LOC116150296
location: 283208..283678
location: region:283208-283678:1
so has part: feature:283208-283678:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283208-283678:1:exon

LOC105090584
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105090584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 340027..341163
location: region:340027-341163:1
so has part: feature:340027-341163:1:exon

105090584
type: Gene
SIO_000068: ncbigene

position:340027:1
position: 340027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341163:1
position: 341163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340027-341163:1:exon

LOC105090584
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105090584
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105090584
subclass of: SO_0000673
so part of: LOC105090584
location: 340027..341163
location: region:340027-341163:1
so has part: feature:340027-341163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340027-341163:1:exon

LOC105090581
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105090581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 343007..344030
location: region:343007-344030:1
so has part: feature:343007-344030:1:exon

105090581
type: Gene
SIO_000068: ncbigene

position:343007:1
position: 343007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344030:1
position: 344030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343007-344030:1:exon

LOC105090581
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105090581
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105090581
subclass of: SO_0000673
so part of: LOC105090581
location: 343007..344030
location: region:343007-344030:1
so has part: feature:343007-344030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:343007-344030:1:exon

ALG10
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ALG10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(362524..368781)
location: region:362524-368781:-1
so has part: feature:362524-368781:-1:exon
subclass of: SO_0000010

105090579
type: Gene
SIO_000068: ncbigene

position:362524:-1
position: 362524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368781:-1
position: 368781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362524-368781:-1:exon

ALG10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ALG10
product: ALG10 alpha-1,2-glucosyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_010981932.2
SIO_010081: ALG10
subclass of: SO_0000673
so part of: ALG10
location: complement(join(362524..365316,367000..367197,368473..368781))
location: region:362524-368781:-1
so has part: feature:368473-368781:-1:exon
so has part: feature:367000-367197:-1:exon
so has part: feature:362524-365316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368473-368781:-1:exon

position:368473:-1
position: 368473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:367000-367197:-1:exon

position:367000:-1
position: 367000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367197:-1
position: 367197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:362524-365316:-1:exon

position:365316:-1
position: 365316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ALG10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ALG10
product: ALG10 alpha-1,2-glucosyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_031443812.1
SIO_010081: ALG10
subclass of: SO_0000673
so part of: ALG10
location: complement(join(362524..365316,367000..367197,368383..368781))
location: region:362524-368781:-1
so has part: feature:368383-368781:-1:exon
so has part: feature:367000-367197:-1:exon
so has part: feature:362524-365316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368383-368781:-1:exon

position:368383:-1
position: 368383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:367000-367197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:362524-365316:-1:exon

ALG10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ALG10
product: ALG10 alpha-1,2-glucosyltransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_010981934.2
SIO_010081: ALG10
subclass of: SO_0000673
so part of: ALG10
location: complement(join(362524..365316,367000..367197,368499..368628))
location: region:362524-368628:-1
so has part: feature:368499-368628:-1:exon
so has part: feature:367000-367197:-1:exon
so has part: feature:362524-365316:-1:exon

position:368628:-1
position: 368628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368499-368628:-1:exon

position:368499:-1
position: 368499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:367000-367197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:362524-365316:-1:exon

ALG10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ALG10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X2
translation: MAQLEGYYFSAALSCTFLVSCLLFSAFSRALREPYMDEIFHLPQAQRYCEGHFSLSQWDPMITTLPGLYLLSVGVVKPASWIFGWSEHVVCSIGMLRFVNLLFSVGNFYLLYLLLRKVQPRHKATSSVQRILSTVTLAIFPTLYFFNFLYYTEAGSMFFTLFAYLMCLYGNHKTSALLGFCGFMFRQTNIIWAVFCAGNVIAQKLTEAWKTELQKKKEERLPPVRGPFSEFRKILRFLLAYSTSFKNLSALLLLTWPYGLLALLFCAFVAVNGGVVIGDRSSHEACLHFPQLFYFCSFTLFFSFPHLLSLSKIRAFLCLVWKRKLQFLAVTLVSIFLVWRFTYAHKYLLADNRHYTFYVWKRVFQRHEIVRYLLVPLYIFAGWSIADSLKSKPIFWNLMFFVCLFAVTVPQKLLEFRYFILPYVIYRLNIPLPPTSRLVCELGCYAVINFLTFYIFLHKTFQWPDSPDTQRFMW
SIO_010081: ALG10
subclass of: SO_0000673
so part of: ALG10
location: complement(join(364261..365316,367000..367197,368473..368643))
location: region:364261-368643:-1
so has part: feature:368473-368643:-1:exon
so has part: feature:367000-367197:-1:exon
so has part: feature:364261-365316:-1:exon

XP_010980234.1
type: Protein
SIO_000068: ncbiprotein

position:364261:-1
position: 364261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368643:-1
position: 368643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368473-368643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:367000-367197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364261-365316:-1:exon

ALG10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ALG10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X1
translation: MAQLEGYYFSAALSCTFLVSCLLFSAFSRALREPYMDEIFHLPQAQRYCEGHFSLSQVGPPACPAQDTLERAAPAQRHCRGHFSLSQWDPMITTLPGLYLLSVGVVKPASWIFGWSEHVVCSIGMLRFVNLLFSVGNFYLLYLLLRKVQPRHKATSSVQRILSTVTLAIFPTLYFFNFLYYTEAGSMFFTLFAYLMCLYGNHKTSALLGFCGFMFRQTNIIWAVFCAGNVIAQKLTEAWKTELQKKKEERLPPVRGPFSEFRKILRFLLAYSTSFKNLSALLLLTWPYGLLALLFCAFVAVNGGVVIGDRSSHEACLHFPQLFYFCSFTLFFSFPHLLSLSKIRAFLCLVWKRKLQFLAVTLVSIFLVWRFTYAHKYLLADNRHYTFYVWKRVFQRHEIVRYLLVPLYIFAGWSIADSLKSKPIFWNLMFFVCLFAVTVPQKLLEFRYFILPYVIYRLNIPLPPTSRLVCELGCYAVINFLTFYIFLHKTFQWPDSPDTQRFMW
SIO_010081: ALG10
subclass of: SO_0000673
so part of: ALG10
location: complement(join(364261..365316,367000..367197,368383..368643))
location: region:364261-368643:-1
so has part: feature:368383-368643:-1:exon
so has part: feature:367000-367197:-1:exon
so has part: feature:364261-365316:-1:exon

XP_031299672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368383-368643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:367000-367197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364261-365316:-1:exon

ALG10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ALG10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X3
translation: MITTLPGLYLLSVGVVKPASWIFGWSEHVVCSIGMLRFVNLLFSVGNFYLLYLLLRKVQPRHKATSSVQRILSTVTLAIFPTLYFFNFLYYTEAGSMFFTLFAYLMCLYGNHKTSALLGFCGFMFRQTNIIWAVFCAGNVIAQKLTEAWKTELQKKKEERLPPVRGPFSEFRKILRFLLAYSTSFKNLSALLLLTWPYGLLALLFCAFVAVNGGVVIGDRSSHEACLHFPQLFYFCSFTLFFSFPHLLSLSKIRAFLCLVWKRKLQFLAVTLVSIFLVWRFTYAHKYLLADNRHYTFYVWKRVFQRHEIVRYLLVPLYIFAGWSIADSLKSKPIFWNLMFFVCLFAVTVPQKLLEFRYFILPYVIYRLNIPLPPTSRLVCELGCYAVINFLTFYIFLHKTFQWPDSPDTQRFMW
SIO_010081: ALG10
subclass of: SO_0000673
so part of: ALG10
location: complement(join(364261..365316,367000..367188))
location: region:364261-367188:-1
so has part: feature:367000-367188:-1:exon
so has part: feature:364261-365316:-1:exon

XP_010980236.1
type: Protein
SIO_000068: ncbiprotein

position:367188:-1
position: 367188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367000-367188:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364261-365316:-1:exon

SYT10
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SYT10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 532308..591169
location: region:532308-591169:1
so has part: feature:532308-591169:1:exon
subclass of: SO_0000010

105090578
type: Gene
SIO_000068: ncbigene

position:532308:1
position: 532308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591169:1
position: 591169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532308-591169:1:exon

SYT10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SYT10
product: synaptotagmin 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010981931.2
SIO_010081: SYT10
subclass of: SO_0000673
so part of: SYT10
location: join(532308..532899,548137..548497,563044..563611,581078..581198,584251..584422,586768..586897,589563..591169)
location: region:532308-591169:1
so has part: feature:532308-532899:1:exon
so has part: feature:548137-548497:1:exon
so has part: feature:563044-563611:1:exon
so has part: feature:581078-581198:1:exon
so has part: feature:584251-584422:1:exon
so has part: feature:586768-586897:1:exon
so has part: feature:589563-591169:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:532308-532899:1:exon

position:532899:1
position: 532899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548137-548497:1:exon

position:548137:1
position: 548137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548497:1
position: 548497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:563044-563611:1:exon

position:563044:1
position: 563044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563611:1
position: 563611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:581078-581198:1:exon

position:581078:1
position: 581078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581198:1
position: 581198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:584251-584422:1:exon

position:584251:1
position: 584251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584422:1
position: 584422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:586768-586897:1:exon

position:586768:1
position: 586768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586897:1
position: 586897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:589563-591169:1:exon

position:589563:1
position: 589563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYT10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SYT10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-10
translation: MSFHKEDGVSSLCQKALHIVTELCFAGQVEWEKCSSIFPPDRGSQGGGSTDISVSLLAVVVSFCGLALLVVSLFVFWKLCWPCWKSKPLASNVSTLPPSVSSAPTEVFQETEEKKEVKENGKPALKAIEPAIKISHTSPDIPAEVQTALKEHLIKHARVQRQTTEPTSSSRHNSFRRHLPRQMQVSSVDFGMGTEPVLQKGETTTSIGRIKPELYKQKSVDSEDDRKEDIKVCGKLNFTLQYDYENELLVVKIVKALDLPAKDFAGTSDPYVKMYLLPDRKKKFQTRVHRKTLNPLFDETFQFPVAYDQLSNRKLHFSIYDFDRFSRHDMIGEAILDNLFEASDLSREATMWKDIHCATTESIDLGEIMFSLCYLPTAGRMTLTVIKCRNLKAMDITGSSDPYVKVSLMCEGRRLKKRKTTTKKNTLNPVYNEAIVFDIPPENVDQVSLSIAVMDYDRVGHNEVIGVCRAGLDAEGLGRDHWNEMLAYHRKPITHWHPLLELPGRATSFDSQGSCSSPKPPSTP
SIO_010081: SYT10
subclass of: SO_0000673
so part of: SYT10
location: join(532749..532899,548137..548497,563044..563611,581078..581198,584251..584422,586768..586897,589563..589634)
location: region:532749-589634:1
so has part: feature:532749-532899:1:exon
so has part: feature:548137-548497:1:exon
so has part: feature:563044-563611:1:exon
so has part: feature:581078-581198:1:exon
so has part: feature:584251-584422:1:exon
so has part: feature:586768-586897:1:exon
so has part: feature:589563-589634:1:exon

XP_010980233.1
type: Protein
SIO_000068: ncbiprotein

position:532749:1
position: 532749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589634:1
position: 589634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532749-532899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548137-548497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563044-563611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:581078-581198:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584251-584422:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:586768-586897:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:589563-589634:1:exon

LOC116150297
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150297
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(833834..834671)
location: region:833834-834671:-1
so has part: feature:833834-834671:-1:exon

116150297
type: Gene
SIO_000068: ncbigene

position:833834:-1
position: 833834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834671:-1
position: 834671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833834-834671:-1:exon

LOC116150297
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150297
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116150297
subclass of: SO_0000673
so part of: LOC116150297
location: complement(833834..834671)
location: region:833834-834671:-1
so has part: feature:833834-834671:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833834-834671:-1:exon

LOC116150318
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(838379..854897)
location: region:838379-854897:-1
so has part: feature:838379-854897:-1:exon
subclass of: SO_0000011

116150318
type: Gene
SIO_000068: ncbigene

position:838379:-1
position: 838379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854897:-1
position: 854897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838379-854897:-1:exon

LOC116150318
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150318
product: uncharacterized LOC116150318
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004134001.1
SIO_010081: LOC116150318
subclass of: SO_0000673
so part of: LOC116150318
location: complement(join(838379..839700,850895..851076,852409..852632,854081..854231,854716..854897))
location: region:838379-854897:-1
so has part: feature:854716-854897:-1:exon
so has part: feature:854081-854231:-1:exon
so has part: feature:852409-852632:-1:exon
so has part: feature:850895-851076:-1:exon
so has part: feature:838379-839700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854716-854897:-1:exon

position:854716:-1
position: 854716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:854081-854231:-1:exon

position:854081:-1
position: 854081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854231:-1
position: 854231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:852409-852632:-1:exon

position:852409:-1
position: 852409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852632:-1
position: 852632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:850895-851076:-1:exon

position:850895:-1
position: 850895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851076:-1
position: 851076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:838379-839700:-1:exon

position:839700:-1
position: 839700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAD-GUC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAD-GUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 877021..877093
location: region:877021-877093:1
so has part: feature:877021-877093:1:exon
subclass of: SO_0000663

116150418
type: Gene
SIO_000068: ncbigene

position:877021:1
position: 877021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877093:1
position: 877093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877021-877093:1:exon

TRNAD-GUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAD-GUC
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:877054..877056,aa:Asp,seq:gtc)
SIO_010081: TRNAD-GUC
subclass of: SO_0000673
so part of: TRNAD-GUC
location: 877021..877093
location: region:877021-877093:1
so has part: feature:877021-877093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:877021-877093:1:exon

PANO1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: PANO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(882905..934583)
location: region:882905-934583:-1
so has part: feature:882905-934583:-1:exon
subclass of: SO_0000010

116150320
type: Gene
SIO_000068: ncbigene

position:882905:-1
position: 882905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934583:-1
position: 934583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882905-934583:-1:exon

PANO1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: PANO1
product: proapoptotic nucleolar protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004134003.1
SIO_010081: PANO1
so part of: PANO1
location: complement(join(882905..883458,891981..892230,933140..933261,934137..934583))
location: region:882905-934583:-1
so has part: feature:934137-934583:-1:exon
so has part: feature:933140-933261:-1:exon
so has part: feature:891981-892230:-1:exon
so has part: feature:882905-883458:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934137-934583:-1:exon

position:934137:-1
position: 934137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933140-933261:-1:exon

position:933140:-1
position: 933140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933261:-1
position: 933261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:891981-892230:-1:exon

position:891981:-1
position: 891981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892230:-1
position: 892230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:882905-883458:-1:exon

position:883458:-1
position: 883458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PANO1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: PANO1
product: proapoptotic nucleolar protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004134002.1
SIO_010081: PANO1
so part of: PANO1
location: complement(join(889906..891738,891981..892230,933140..933261,934137..934583))
location: region:889906-934583:-1
so has part: feature:934137-934583:-1:exon
so has part: feature:933140-933261:-1:exon
so has part: feature:891981-892230:-1:exon
so has part: feature:889906-891738:-1:exon

position:889906:-1
position: 889906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934137-934583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933140-933261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891981-892230:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889906-891738:-1:exon

position:891738:-1
position: 891738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PANO1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: PANO1
product: proapoptotic nucleolar protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004134006.1
SIO_010081: PANO1
so part of: PANO1
location: complement(join(889906..891738,891981..892230,933140..933261,934079..934583))
location: region:889906-934583:-1
so has part: feature:934079-934583:-1:exon
so has part: feature:933140-933261:-1:exon
so has part: feature:891981-892230:-1:exon
so has part: feature:889906-891738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934079-934583:-1:exon

position:934079:-1
position: 934079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933140-933261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891981-892230:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889906-891738:-1:exon

PANO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PANO1
product: proapoptotic nucleolar protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031443814.1
SIO_010081: PANO1
subclass of: SO_0000673
so part of: PANO1
location: complement(join(930789..931683,933140..933261,934137..934583))
location: region:930789-934583:-1
so has part: feature:934137-934583:-1:exon
so has part: feature:933140-933261:-1:exon
so has part: feature:930789-931683:-1:exon

position:930789:-1
position: 930789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934137-934583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933140-933261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:930789-931683:-1:exon

position:931683:-1
position: 931683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PANO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PANO1
product: proapoptotic nucleolar protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031443815.1
SIO_010081: PANO1
subclass of: SO_0000673
so part of: PANO1
location: complement(join(930789..931683,933092..933261,934137..934583))
location: region:930789-934583:-1
so has part: feature:934137-934583:-1:exon
so has part: feature:933092-933261:-1:exon
so has part: feature:930789-931683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934137-934583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933092-933261:-1:exon

position:933092:-1
position: 933092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:930789-931683:-1:exon

PANO1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: PANO1
product: proapoptotic nucleolar protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004134005.1
SIO_010081: PANO1
so part of: PANO1
location: complement(join(930789..931683,933092..933261,934079..934583))
location: region:930789-934583:-1
so has part: feature:934079-934583:-1:exon
so has part: feature:933092-933261:-1:exon
so has part: feature:930789-931683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934079-934583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933092-933261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:930789-931683:-1:exon

PANO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PANO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proapoptotic nucleolar protein 1 isoform X1
translation: MGPEDATEPLARRQTCRRSCGEPGHWREPRRPAPPTPRPRPCPARAGERPQLGGAASGAGHRACPGGGAAPAGQAHWARERGRAGRARRHLESWIARGEAGKGGAARPGSRTPFESLRILARPAAPGSRGLARPPPGPRKGCDFRPPGRCKAFQGVKRKSRSQKPGQRSGDSSATLSQLATWLKRRHVDESDKRKKKENHRNIEMECK
SIO_010081: PANO1
subclass of: SO_0000673
so part of: PANO1
location: complement(join(931625..931683,933140..933261,934137..934582))
location: region:931625-934582:-1
so has part: feature:934137-934582:-1:exon
so has part: feature:933140-933261:-1:exon
so has part: feature:931625-931683:-1:exon

XP_031299674.1
type: Protein
SIO_000068: ncbiprotein

position:931625:-1
position: 931625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934582:-1
position: 934582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934137-934582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933140-933261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931625-931683:-1:exon

PANO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PANO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proapoptotic nucleolar protein 1 isoform X2
translation: MGPEDATEPLARRQTCRRSCGEPGHWREPRRPAPPTPRPRPCPARAGERPQLGGAASGAGHRACPGGGAAPAGQAHWARERGRAGRARRHLESWIARGEAGKGGAARPGSRTPFESLRILARPAAPGSRGLARPPPGPRKGCDFRPPGRCKAFQGVKRKSRSQKPGQRSGDSSATLSQLATWLKRRHVDGES
SIO_010081: PANO1
subclass of: SO_0000673
so part of: PANO1
location: complement(join(933129..933261,934137..934582))
location: region:933129-934582:-1
so has part: feature:934137-934582:-1:exon
so has part: feature:933129-933261:-1:exon

XP_031299675.1
type: Protein
SIO_000068: ncbiprotein

position:933129:-1
position: 933129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934137-934582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933129-933261:-1:exon

PKP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: PKP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 934497..1008895
location: region:934497-1008895:1
so has part: feature:934497-1008895:1:exon
subclass of: SO_0000010

105090582
type: Gene
SIO_000068: ncbigene

position:934497:1
position: 934497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008895:1
position: 1008895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934497-1008895:1:exon

PKP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PKP2
product: plakophilin 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031443813.1
SIO_010081: PKP2
subclass of: SO_0000673
so part of: PKP2
location: join(934497..934802,948144..948256,949017..949697,957554..957689,969636..969843,977965..978142,992794..992911,993748..993912,994781..994954,1000791..1000944,1005134..1005323,1007785..1007872,1008004..1008895)
location: region:934497-1008895:1
so has part: feature:934497-934802:1:exon
so has part: feature:948144-948256:1:exon
so has part: feature:949017-949697:1:exon
so has part: feature:957554-957689:1:exon
so has part: feature:969636-969843:1:exon
so has part: feature:977965-978142:1:exon
so has part: feature:992794-992911:1:exon
so has part: feature:993748-993912:1:exon
so has part: feature:994781-994954:1:exon
so has part: feature:1000791-1000944:1:exon
so has part: feature:1005134-1005323:1:exon
so has part: feature:1007785-1007872:1:exon
so has part: feature:1008004-1008895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934497-934802:1:exon

position:934802:1
position: 934802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:948144-948256:1:exon

position:948144:1
position: 948144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948256:1
position: 948256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:949017-949697:1:exon

position:949017:1
position: 949017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949697:1
position: 949697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:957554-957689:1:exon

position:957554:1
position: 957554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957689:1
position: 957689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:969636-969843:1:exon

position:969636:1
position: 969636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:969843:1
position: 969843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:977965-978142:1:exon

position:977965:1
position: 977965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978142:1
position: 978142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:992794-992911:1:exon

position:992794:1
position: 992794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992911:1
position: 992911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:993748-993912:1:exon

position:993748:1
position: 993748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993912:1
position: 993912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:994781-994954:1:exon

position:994781:1
position: 994781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994954:1
position: 994954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1000791-1000944:1:exon

position:1000791:1
position: 1000791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000944:1
position: 1000944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1005134-1005323:1:exon

position:1005134:1
position: 1005134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005323:1
position: 1005323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1007785-1007872:1:exon

position:1007785:1
position: 1007785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007872:1
position: 1007872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1008004-1008895:1:exon

position:1008004:1
position: 1008004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PKP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PKP2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: plakophilin-2
translation: MAAPGSPAECGYIRTVLGQQILGQLDSSSLALPSEAKLKLAGSSGRTGXAAKSLRSRSRCSRPLARKGRSFVGNGNLHRATSVPEYVHNLHLVENDFAAGRFPFTKTYDVLQTGTTATYEARWGRGTSQYSSQERVEERSLRQPLRRLEISPDSSPERPLPYARRPQYSQRSQAGHTLRAQEGRRSAASLPPRLNARSEIVGFSHSGARASRQRHXDTYQRRYHDAXFDGAPVAPVLLTYPRPRDQPQPGHPPEKENYLAPGPLAGQVRPPRRPRTRRRAGPAARSSWHQSSFHHTRPCGPXVAAESGGRRMHMTVGQVAAGGSGNVLAERGAFADAQLGNLDTEMTLERAVSMLEANHTPLSRISAAATFIQHECFQKSEARRRVNQLHGIPKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAELGGVRQLLQVLKQTRDLETKKQITGLLWNLSSNDRLKNLMITEALLTLTENVVIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSAGPEGRKVMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCILHNLSYQLEAELPEKYSQSIYIQNRTIQADSNKSVGCFGSRSRKVKEQYQDMPMPEEKSNPKGVEWLWHSIVIRMYLSLIAKSGRNYTQEASLGALQNLTAGSGPMPASVAQTVVQKENGLHHTRKMLHVGDPSVKKTAVSLLRNLSRNLSLQNEIAKETLPDLVSIIPDTVPSTDLLIETTASACYTLNNIIQNSYQNARDLLNTGGLQKIMTISAGDISASNKASKAASVLLYSLWSHAELHSAYKKAQFKKTDFVNSRTAKAFHSLKD
SIO_010081: PKP2
subclass of: SO_0000673
so part of: PKP2
location: join(934581..934802,948144..948256,949017..949697,957554..957689,969636..969843,977965..978142,992794..992911,993748..993912,994781..994954,1000791..1000944,1005134..1005323,1007785..1007872,1008004..1008072)
location: region:934581-1008072:1
so has part: feature:934581-934802:1:exon
so has part: feature:948144-948256:1:exon
so has part: feature:949017-949697:1:exon
so has part: feature:957554-957689:1:exon
so has part: feature:969636-969843:1:exon
so has part: feature:977965-978142:1:exon
so has part: feature:992794-992911:1:exon
so has part: feature:993748-993912:1:exon
so has part: feature:994781-994954:1:exon
so has part: feature:1000791-1000944:1:exon
so has part: feature:1005134-1005323:1:exon
so has part: feature:1007785-1007872:1:exon
so has part: feature:1008004-1008072:1:exon

XP_031299673.1
type: Protein
SIO_000068: ncbiprotein

position:934581:1
position: 934581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008072:1
position: 1008072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934581-934802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:948144-948256:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:949017-949697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:957554-957689:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:969636-969843:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:977965-978142:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:992794-992911:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:993748-993912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:994781-994954:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1000791-1000944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1005134-1005323:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1007785-1007872:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1008004-1008072:1:exon

YARS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: YARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1038721..1049364
location: region:1038721-1049364:1
so has part: feature:1038721-1049364:1:exon
subclass of: SO_0000010

105084510
type: Gene
SIO_000068: ncbigene

position:1038721:1
position: 1038721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049364:1
position: 1049364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1038721-1049364:1:exon

YARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: YARS2
product: tyrosyl-tRNA synthetase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_010974653.2
SIO_010081: YARS2
subclass of: SO_0000673
so part of: YARS2
location: join(1038721..1039583,1040414..1040581,1045961..1046116,1046429..1046599,1047240..1049364)
location: region:1038721-1049364:1
so has part: feature:1038721-1039583:1:exon
so has part: feature:1040414-1040581:1:exon
so has part: feature:1045961-1046116:1:exon
so has part: feature:1046429-1046599:1:exon
so has part: feature:1047240-1049364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1038721-1039583:1:exon

position:1039583:1
position: 1039583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1040414-1040581:1:exon

position:1040414:1
position: 1040414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040581:1
position: 1040581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1045961-1046116:1:exon

position:1045961:1
position: 1045961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046116:1
position: 1046116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1046429-1046599:1:exon

position:1046429:1
position: 1046429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046599:1
position: 1046599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1047240-1049364:1:exon

position:1047240:1
position: 1047240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: YARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine--tRNA ligase, mitochondrial
translation: MAAPMLRCISRGRRFGTPGRSGVLPRGLRESHSGAQGLLAVQKARGLFKEFFPERGTKTELPELFDHRTAGTVPQTVYCGFDPTADSLHVGHLLALLGLFHFQRAGHNVIALVGGATARLGDPSGRSKEREALAAERVRSNARALRRGLQALAANHQQLFADGRAWGTFTVLDNADWYQKQPLVDFLAAVGGHFRMGTLLSRLSVQTRLKSPEGMSLAEFLYQVLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGISVPLITSTTGAKLGKSAGNAVWLNRDKTSPFELYQFFVRQQDDLVERYLKLFTFLPLPEIDHIMQLHVKEAEKRGPQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEASFSELVLDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVVGQHILKNGLSLLKIGKRNVYIIKWLQL
SIO_010081: YARS2
subclass of: SO_0000673
so part of: YARS2
location: join(1038802..1039583,1040414..1040581,1045961..1046116,1046429..1046599,1047240..1047399)
location: region:1038802-1047399:1
so has part: feature:1038802-1039583:1:exon
so has part: feature:1040414-1040581:1:exon
so has part: feature:1045961-1046116:1:exon
so has part: feature:1046429-1046599:1:exon
so has part: feature:1047240-1047399:1:exon

XP_010972955.1
type: Protein
SIO_000068: ncbiprotein

position:1038802:1
position: 1038802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047399:1
position: 1047399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1038802-1039583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040414-1040581:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045961-1046116:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1046429-1046599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1047240-1047399:1:exon

DNM1L
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: DNM1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1049680..1095450)
location: region:1049680-1095450:-1
so has part: feature:1049680-1095450:-1:exon
subclass of: SO_0000010

105084508
type: Gene
SIO_000068: ncbigene

position:1049680:-1
position: 1049680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095450:-1
position: 1095450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1049680-1095450:-1:exon

DNM1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DNM1L
product: dynamin 1 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010974650.2
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1049680..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1052987..1053019,1053336..1053413,1054103..1054159,1056455..1056547,1057935..1058024,1058261..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1074519..1074557,1077855..1078002,1095246..1095449))
location: region:1049680-1095449:-1
so has part: feature:1095246-1095449:-1:exon
so has part: feature:1077855-1078002:-1:exon
so has part: feature:1074519-1074557:-1:exon
so has part: feature:1072994-1073040:-1:exon
so has part: feature:1072505-1072576:-1:exon
so has part: feature:1071224-1071310:-1:exon
so has part: feature:1065653-1065815:-1:exon
so has part: feature:1063589-1063709:-1:exon
so has part: feature:1061933-1062064:-1:exon
so has part: feature:1060827-1061033:-1:exon
so has part: feature:1058652-1058772:-1:exon
so has part: feature:1058261-1058416:-1:exon
so has part: feature:1057935-1058024:-1:exon
so has part: feature:1056455-1056547:-1:exon
so has part: feature:1054103-1054159:-1:exon
so has part: feature:1053336-1053413:-1:exon
so has part: feature:1052987-1053019:-1:exon
so has part: feature:1051254-1051430:-1:exon
so has part: feature:1050987-1051096:-1:exon
so has part: feature:1050668-1050827:-1:exon
so has part: feature:1049680-1050389:-1:exon

position:1095449:-1
position: 1095449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095246-1095449:-1:exon

position:1095246:-1
position: 1095246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1077855-1078002:-1:exon

position:1077855:-1
position: 1077855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078002:-1
position: 1078002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1074519-1074557:-1:exon

position:1074519:-1
position: 1074519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074557:-1
position: 1074557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1072994-1073040:-1:exon

position:1072994:-1
position: 1072994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073040:-1
position: 1073040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1072505-1072576:-1:exon

position:1072505:-1
position: 1072505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072576:-1
position: 1072576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1071224-1071310:-1:exon

position:1071224:-1
position: 1071224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071310:-1
position: 1071310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1065653-1065815:-1:exon

position:1065653:-1
position: 1065653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065815:-1
position: 1065815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1063589-1063709:-1:exon

position:1063589:-1
position: 1063589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1063709:-1
position: 1063709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1061933-1062064:-1:exon

position:1061933:-1
position: 1061933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062064:-1
position: 1062064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1060827-1061033:-1:exon

position:1060827:-1
position: 1060827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061033:-1
position: 1061033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1058652-1058772:-1:exon

position:1058652:-1
position: 1058652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058772:-1
position: 1058772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1058261-1058416:-1:exon

position:1058261:-1
position: 1058261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058416:-1
position: 1058416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1057935-1058024:-1:exon

position:1057935:-1
position: 1057935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058024:-1
position: 1058024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1056455-1056547:-1:exon

position:1056455:-1
position: 1056455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056547:-1
position: 1056547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1054103-1054159:-1:exon

position:1054103:-1
position: 1054103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054159:-1
position: 1054159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1053336-1053413:-1:exon

position:1053336:-1
position: 1053336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053413:-1
position: 1053413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1052987-1053019:-1:exon

position:1052987:-1
position: 1052987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053019:-1
position: 1053019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1051254-1051430:-1:exon

position:1051254:-1
position: 1051254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051430:-1
position: 1051430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1050987-1051096:-1:exon

position:1050987:-1
position: 1050987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051096:-1
position: 1051096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1050668-1050827:-1:exon

position:1050668:-1
position: 1050668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050827:-1
position: 1050827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1049680-1050389:-1:exon

position:1050389:-1
position: 1050389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DNM1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DNM1L
product: dynamin 1 like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031443817.1
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050138..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1053336..1053413,1054103..1054159,1056455..1056547,1057935..1058024,1058234..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1074519..1074557,1077855..1078002,1095246..1095450))
location: region:1050138-1095450:-1
so has part: feature:1095246-1095450:-1:exon
so has part: feature:1077855-1078002:-1:exon
so has part: feature:1074519-1074557:-1:exon
so has part: feature:1072994-1073040:-1:exon
so has part: feature:1072505-1072576:-1:exon
so has part: feature:1071224-1071310:-1:exon
so has part: feature:1065653-1065815:-1:exon
so has part: feature:1063589-1063709:-1:exon
so has part: feature:1061933-1062064:-1:exon
so has part: feature:1060827-1061033:-1:exon
so has part: feature:1058652-1058772:-1:exon
so has part: feature:1058234-1058416:-1:exon
so has part: feature:1057935-1058024:-1:exon
so has part: feature:1056455-1056547:-1:exon
so has part: feature:1054103-1054159:-1:exon
so has part: feature:1053336-1053413:-1:exon
so has part: feature:1051254-1051430:-1:exon
so has part: feature:1050987-1051096:-1:exon
so has part: feature:1050668-1050827:-1:exon
so has part: feature:1050138-1050389:-1:exon

position:1050138:-1
position: 1050138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095246-1095450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077855-1078002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074519-1074557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072994-1073040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072505-1072576:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071224-1071310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1065653-1065815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1063589-1063709:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061933-1062064:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1060827-1061033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058652-1058772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1058234-1058416:-1:exon

position:1058234:-1
position: 1058234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1057935-1058024:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1056455-1056547:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1054103-1054159:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1053336-1053413:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1051254-1051430:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1050987-1051096:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1050668-1050827:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1050138-1050389:-1:exon

DNM1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DNM1L
product: dynamin 1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031443816.1
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050138..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1052987..1053019,1053336..1053413,1054103..1054159,1056455..1056547,1057935..1058024,1058234..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1074519..1074557,1077855..1078002,1095246..1095450))
location: region:1050138-1095450:-1
so has part: feature:1095246-1095450:-1:exon
so has part: feature:1077855-1078002:-1:exon
so has part: feature:1074519-1074557:-1:exon
so has part: feature:1072994-1073040:-1:exon
so has part: feature:1072505-1072576:-1:exon
so has part: feature:1071224-1071310:-1:exon
so has part: feature:1065653-1065815:-1:exon
so has part: feature:1063589-1063709:-1:exon
so has part: feature:1061933-1062064:-1:exon
so has part: feature:1060827-1061033:-1:exon
so has part: feature:1058652-1058772:-1:exon
so has part: feature:1058234-1058416:-1:exon
so has part: feature:1057935-1058024:-1:exon
so has part: feature:1056455-1056547:-1:exon
so has part: feature:1054103-1054159:-1:exon
so has part: feature:1053336-1053413:-1:exon
so has part: feature:1052987-1053019:-1:exon
so has part: feature:1051254-1051430:-1:exon
so has part: feature:1050987-1051096:-1:exon
so has part: feature:1050668-1050827:-1:exon
so has part: feature:1050138-1050389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1095246-1095450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077855-1078002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074519-1074557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072994-1073040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072505-1072576:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071224-1071310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1065653-1065815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1063589-1063709:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061933-1062064:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1060827-1061033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058652-1058772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1058234-1058416:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1057935-1058024:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1056455-1056547:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1054103-1054159:-1:exon

urn:…
SIO_000300: 16
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DNM1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DNM1L
product: dynamin 1 like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_010974651.2
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050138..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1053336..1053413,1054103..1054159,1056455..1056547,1057935..1058024,1058261..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1074519..1074557,1077855..1078002,1095246..1095449))
location: region:1050138-1095449:-1
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DNM1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DNM1L
product: dynamin 1 like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031443818.1
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050138..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1054103..1054159,1056455..1056547,1057935..1058024,1058234..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1074519..1074557,1077855..1078002,1095246..1095449))
location: region:1050138-1095449:-1
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DNM1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DNM1L
product: dynamin 1 like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_010974645.2
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050138..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1053336..1053413,1054103..1054159,1056455..1056547,1057935..1058024,1058261..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1077855..1078002,1095246..1095448))
location: region:1050138-1095448:-1
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position:1095448:-1
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type: ReverseStrandPosition
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DNM1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DNM1L
product: dynamin 1 like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_010974644.2
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050138..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1052987..1053019,1053336..1053413,1054103..1054159,1056455..1056547,1057935..1058024,1058261..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1077855..1078002,1095246..1095448))
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DNM1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DNM1L
product: dynamin 1 like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_010974647.2
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050138..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1054103..1054159,1056455..1056547,1057935..1058024,1058261..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1074519..1074557,1077855..1078002,1095246..1095448))
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DNM1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DNM1L
product: dynamin 1 like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010974649.2
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
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position:1095447:-1
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urn:…
SIO_000300: 5
SIO_000628: feature:1071224-1071310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1065653-1065815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1063589-1063709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1061933-1062064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1060827-1061033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058652-1058772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058261-1058416:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1057935-1058024:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1056455-1056547:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1054103-1054159:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1051254-1051430:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1050987-1051096:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1050668-1050827:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1050138-1050389:-1:exon

DNM1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DNM1L
product: dynamin 1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_010974648.2
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050138..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1052987..1053019,1054103..1054159,1056455..1056547,1057935..1058024,1058261..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1077855..1078002,1095246..1095385))
location: region:1050138-1095385:-1
so has part: feature:1095246-1095385:-1:exon
so has part: feature:1077855-1078002:-1:exon
so has part: feature:1072994-1073040:-1:exon
so has part: feature:1072505-1072576:-1:exon
so has part: feature:1071224-1071310:-1:exon
so has part: feature:1065653-1065815:-1:exon
so has part: feature:1063589-1063709:-1:exon
so has part: feature:1061933-1062064:-1:exon
so has part: feature:1060827-1061033:-1:exon
so has part: feature:1058652-1058772:-1:exon
so has part: feature:1058261-1058416:-1:exon
so has part: feature:1057935-1058024:-1:exon
so has part: feature:1056455-1056547:-1:exon
so has part: feature:1054103-1054159:-1:exon
so has part: feature:1052987-1053019:-1:exon
so has part: feature:1051254-1051430:-1:exon
so has part: feature:1050987-1051096:-1:exon
so has part: feature:1050668-1050827:-1:exon
so has part: feature:1050138-1050389:-1:exon

position:1095385:-1
position: 1095385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095246-1095385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077855-1078002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1072994-1073040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072505-1072576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071224-1071310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1065653-1065815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1063589-1063709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1061933-1062064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1060827-1061033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058652-1058772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058261-1058416:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1057935-1058024:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1056455-1056547:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1054103-1054159:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1052987-1053019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1051254-1051430:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1050987-1051096:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1050668-1050827:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1050138-1050389:-1:exon

DNM1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DNM1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-1-like protein isoform X10
translation: MEALIPVINKLQDVFNTVGADIIQLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSPEDKRKTTGEENGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKSATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKAASGGGGVGDGVQEPATGNWRGMLKTSKAEELLAEEKSKPIPIMPASPQKGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRETHLW
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050333..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1054103..1054159,1056455..1056547,1057935..1058024,1058261..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1077855..1078002,1095246..1095347))
location: region:1050333-1095347:-1
so has part: feature:1095246-1095347:-1:exon
so has part: feature:1077855-1078002:-1:exon
so has part: feature:1072994-1073040:-1:exon
so has part: feature:1072505-1072576:-1:exon
so has part: feature:1071224-1071310:-1:exon
so has part: feature:1065653-1065815:-1:exon
so has part: feature:1063589-1063709:-1:exon
so has part: feature:1061933-1062064:-1:exon
so has part: feature:1060827-1061033:-1:exon
so has part: feature:1058652-1058772:-1:exon
so has part: feature:1058261-1058416:-1:exon
so has part: feature:1057935-1058024:-1:exon
so has part: feature:1056455-1056547:-1:exon
so has part: feature:1054103-1054159:-1:exon
so has part: feature:1051254-1051430:-1:exon
so has part: feature:1050987-1051096:-1:exon
so has part: feature:1050668-1050827:-1:exon
so has part: feature:1050333-1050389:-1:exon

XP_010972951.1
type: Protein
SIO_000068: ncbiprotein

position:1050333:-1
position: 1050333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095347:-1
position: 1095347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095246-1095347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077855-1078002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1072994-1073040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072505-1072576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071224-1071310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1065653-1065815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1063589-1063709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1061933-1062064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1060827-1061033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058652-1058772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058261-1058416:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1057935-1058024:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1056455-1056547:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1054103-1054159:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1051254-1051430:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1050987-1051096:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1050668-1050827:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1050333-1050389:-1:exon

DNM1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DNM1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-1-like protein isoform X1
translation: MEALIPVINKLQDVFNTVGADIIQLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSPEDKRKTTGEENGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKSATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKLIQDSRRETKNAASGGGGVGDGVQEPATGNWRGMLKTSKAEELLAEEKSKPIPIMPASPQKGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRETHLW
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050333..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1052987..1053019,1054103..1054159,1056455..1056547,1057935..1058024,1058261..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1077855..1078002,1095246..1095347))
location: region:1050333-1095347:-1
so has part: feature:1095246-1095347:-1:exon
so has part: feature:1077855-1078002:-1:exon
so has part: feature:1072994-1073040:-1:exon
so has part: feature:1072505-1072576:-1:exon
so has part: feature:1071224-1071310:-1:exon
so has part: feature:1065653-1065815:-1:exon
so has part: feature:1063589-1063709:-1:exon
so has part: feature:1061933-1062064:-1:exon
so has part: feature:1060827-1061033:-1:exon
so has part: feature:1058652-1058772:-1:exon
so has part: feature:1058261-1058416:-1:exon
so has part: feature:1057935-1058024:-1:exon
so has part: feature:1056455-1056547:-1:exon
so has part: feature:1054103-1054159:-1:exon
so has part: feature:1052987-1053019:-1:exon
so has part: feature:1051254-1051430:-1:exon
so has part: feature:1050987-1051096:-1:exon
so has part: feature:1050668-1050827:-1:exon
so has part: feature:1050333-1050389:-1:exon

XP_010972950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1095246-1095347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077855-1078002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1072994-1073040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072505-1072576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071224-1071310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1065653-1065815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1063589-1063709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1061933-1062064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1060827-1061033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058652-1058772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058261-1058416:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1057935-1058024:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1056455-1056547:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1054103-1054159:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1052987-1053019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1051254-1051430:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1050987-1051096:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1050668-1050827:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1050333-1050389:-1:exon

DNM1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DNM1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-1-like protein isoform X7
translation: MEALIPVINKLQDVFNTVGADIIQLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSPEDKRKTTGEENGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKSATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKSSKVPSALAPASQEPSPAASAEADGKAASGGGGVGDGVQEPATGNWRGMLKTSKAEELLAEEKSKPIPIMPASPQKGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRETHLW
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050333..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1053336..1053413,1054103..1054159,1056455..1056547,1057935..1058024,1058261..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1077855..1078002,1095246..1095347))
location: region:1050333-1095347:-1
so has part: feature:1095246-1095347:-1:exon
so has part: feature:1077855-1078002:-1:exon
so has part: feature:1072994-1073040:-1:exon
so has part: feature:1072505-1072576:-1:exon
so has part: feature:1071224-1071310:-1:exon
so has part: feature:1065653-1065815:-1:exon
so has part: feature:1063589-1063709:-1:exon
so has part: feature:1061933-1062064:-1:exon
so has part: feature:1060827-1061033:-1:exon
so has part: feature:1058652-1058772:-1:exon
so has part: feature:1058261-1058416:-1:exon
so has part: feature:1057935-1058024:-1:exon
so has part: feature:1056455-1056547:-1:exon
so has part: feature:1054103-1054159:-1:exon
so has part: feature:1053336-1053413:-1:exon
so has part: feature:1051254-1051430:-1:exon
so has part: feature:1050987-1051096:-1:exon
so has part: feature:1050668-1050827:-1:exon
so has part: feature:1050333-1050389:-1:exon

XP_010972947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1095246-1095347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077855-1078002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1072994-1073040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072505-1072576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071224-1071310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1065653-1065815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1063589-1063709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1061933-1062064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1060827-1061033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058652-1058772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058261-1058416:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1057935-1058024:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1056455-1056547:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1054103-1054159:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1053336-1053413:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1051254-1051430:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1050987-1051096:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1050668-1050827:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1050333-1050389:-1:exon

DNM1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DNM1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-1-like protein isoform X6
translation: MEALIPVINKLQDVFNTVGADIIQLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSPEDKRKTTGEENGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKSATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKSSKVPSALAPASQEPSPAASAEADGKLIQDSRRETKNAASGGGGVGDGVQEPATGNWRGMLKTSKAEELLAEEKSKPIPIMPASPQKGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRETHLW
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050333..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1052987..1053019,1053336..1053413,1054103..1054159,1056455..1056547,1057935..1058024,1058261..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1077855..1078002,1095246..1095347))
location: region:1050333-1095347:-1
so has part: feature:1095246-1095347:-1:exon
so has part: feature:1077855-1078002:-1:exon
so has part: feature:1072994-1073040:-1:exon
so has part: feature:1072505-1072576:-1:exon
so has part: feature:1071224-1071310:-1:exon
so has part: feature:1065653-1065815:-1:exon
so has part: feature:1063589-1063709:-1:exon
so has part: feature:1061933-1062064:-1:exon
so has part: feature:1060827-1061033:-1:exon
so has part: feature:1058652-1058772:-1:exon
so has part: feature:1058261-1058416:-1:exon
so has part: feature:1057935-1058024:-1:exon
so has part: feature:1056455-1056547:-1:exon
so has part: feature:1054103-1054159:-1:exon
so has part: feature:1053336-1053413:-1:exon
so has part: feature:1052987-1053019:-1:exon
so has part: feature:1051254-1051430:-1:exon
so has part: feature:1050987-1051096:-1:exon
so has part: feature:1050668-1050827:-1:exon
so has part: feature:1050333-1050389:-1:exon

XP_010972946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1095246-1095347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077855-1078002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1072994-1073040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072505-1072576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071224-1071310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1065653-1065815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1063589-1063709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1061933-1062064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1060827-1061033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058652-1058772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058261-1058416:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1057935-1058024:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1056455-1056547:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1054103-1054159:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1053336-1053413:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1052987-1053019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1051254-1051430:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1050987-1051096:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1050668-1050827:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1050333-1050389:-1:exon

DNM1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DNM1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-1-like protein isoform X9
translation: MEALIPVINKLQDVFNTVGADIIQLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKSATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKAASGGGGVGDGVQEPATGNWRGMLKTSKAEELLAEEKSKPIPIMPASPQKGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRETHLW
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050333..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1054103..1054159,1056455..1056547,1057935..1058024,1058261..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1074519..1074557,1077855..1078002,1095246..1095347))
location: region:1050333-1095347:-1
so has part: feature:1095246-1095347:-1:exon
so has part: feature:1077855-1078002:-1:exon
so has part: feature:1074519-1074557:-1:exon
so has part: feature:1072994-1073040:-1:exon
so has part: feature:1072505-1072576:-1:exon
so has part: feature:1071224-1071310:-1:exon
so has part: feature:1065653-1065815:-1:exon
so has part: feature:1063589-1063709:-1:exon
so has part: feature:1061933-1062064:-1:exon
so has part: feature:1060827-1061033:-1:exon
so has part: feature:1058652-1058772:-1:exon
so has part: feature:1058261-1058416:-1:exon
so has part: feature:1057935-1058024:-1:exon
so has part: feature:1056455-1056547:-1:exon
so has part: feature:1054103-1054159:-1:exon
so has part: feature:1051254-1051430:-1:exon
so has part: feature:1050987-1051096:-1:exon
so has part: feature:1050668-1050827:-1:exon
so has part: feature:1050333-1050389:-1:exon

XP_010972949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1095246-1095347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077855-1078002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074519-1074557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072994-1073040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072505-1072576:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071224-1071310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1065653-1065815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1063589-1063709:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061933-1062064:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1060827-1061033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058652-1058772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1058261-1058416:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1057935-1058024:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1056455-1056547:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1054103-1054159:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1051254-1051430:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1050987-1051096:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1050668-1050827:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1050333-1050389:-1:exon

DNM1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DNM1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-1-like protein isoform X5
translation: MEALIPVINKLQDVFNTVGADIIQLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKSATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKSSKVPSALAPASQEPSPAASAEADGKAASGGGGVGDGVQEPATGNWRGMLKTSKAEELLAEEKSKPIPIMPASPQKGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRETHLW
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050333..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1053336..1053413,1054103..1054159,1056455..1056547,1057935..1058024,1058261..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1074519..1074557,1077855..1078002,1095246..1095347))
location: region:1050333-1095347:-1
so has part: feature:1095246-1095347:-1:exon
so has part: feature:1077855-1078002:-1:exon
so has part: feature:1074519-1074557:-1:exon
so has part: feature:1072994-1073040:-1:exon
so has part: feature:1072505-1072576:-1:exon
so has part: feature:1071224-1071310:-1:exon
so has part: feature:1065653-1065815:-1:exon
so has part: feature:1063589-1063709:-1:exon
so has part: feature:1061933-1062064:-1:exon
so has part: feature:1060827-1061033:-1:exon
so has part: feature:1058652-1058772:-1:exon
so has part: feature:1058261-1058416:-1:exon
so has part: feature:1057935-1058024:-1:exon
so has part: feature:1056455-1056547:-1:exon
so has part: feature:1054103-1054159:-1:exon
so has part: feature:1053336-1053413:-1:exon
so has part: feature:1051254-1051430:-1:exon
so has part: feature:1050987-1051096:-1:exon
so has part: feature:1050668-1050827:-1:exon
so has part: feature:1050333-1050389:-1:exon

XP_010972953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1095246-1095347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077855-1078002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074519-1074557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072994-1073040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072505-1072576:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071224-1071310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1065653-1065815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1063589-1063709:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061933-1062064:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1060827-1061033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058652-1058772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1058261-1058416:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1057935-1058024:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1056455-1056547:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1054103-1054159:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1053336-1053413:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1051254-1051430:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1050987-1051096:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1050668-1050827:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1050333-1050389:-1:exon

DNM1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DNM1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-1-like protein isoform X3
translation: MEALIPVINKLQDVFNTVGADIIQLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKSATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKSSKVPSALAPASQEPSPAASAEADGKLIQDSRRETKNAASGGGGVGDGVQEPATGNWRGMLKTSKAEELLAEEKSKPIPIMPASPQKGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRETHLW
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050333..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1052987..1053019,1053336..1053413,1054103..1054159,1056455..1056547,1057935..1058024,1058261..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1074519..1074557,1077855..1078002,1095246..1095347))
location: region:1050333-1095347:-1
so has part: feature:1095246-1095347:-1:exon
so has part: feature:1077855-1078002:-1:exon
so has part: feature:1074519-1074557:-1:exon
so has part: feature:1072994-1073040:-1:exon
so has part: feature:1072505-1072576:-1:exon
so has part: feature:1071224-1071310:-1:exon
so has part: feature:1065653-1065815:-1:exon
so has part: feature:1063589-1063709:-1:exon
so has part: feature:1061933-1062064:-1:exon
so has part: feature:1060827-1061033:-1:exon
so has part: feature:1058652-1058772:-1:exon
so has part: feature:1058261-1058416:-1:exon
so has part: feature:1057935-1058024:-1:exon
so has part: feature:1056455-1056547:-1:exon
so has part: feature:1054103-1054159:-1:exon
so has part: feature:1053336-1053413:-1:exon
so has part: feature:1052987-1053019:-1:exon
so has part: feature:1051254-1051430:-1:exon
so has part: feature:1050987-1051096:-1:exon
so has part: feature:1050668-1050827:-1:exon
so has part: feature:1050333-1050389:-1:exon

XP_010972952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1095246-1095347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077855-1078002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074519-1074557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072994-1073040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072505-1072576:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071224-1071310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1065653-1065815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1063589-1063709:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061933-1062064:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1060827-1061033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058652-1058772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1058261-1058416:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1057935-1058024:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1056455-1056547:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1054103-1054159:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1053336-1053413:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1052987-1053019:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1051254-1051430:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1050987-1051096:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1050668-1050827:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1050333-1050389:-1:exon

DNM1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DNM1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-1-like protein isoform X8
translation: MEALIPVINKLQDVFNTVGADIIQLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKSATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQVIEKCTRFQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKAASGGGGVGDGVQEPATGNWRGMLKTSKAEELLAEEKSKPIPIMPASPQKGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRETHLW
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050333..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1054103..1054159,1056455..1056547,1057935..1058024,1058234..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1074519..1074557,1077855..1078002,1095246..1095347))
location: region:1050333-1095347:-1
so has part: feature:1095246-1095347:-1:exon
so has part: feature:1077855-1078002:-1:exon
so has part: feature:1074519-1074557:-1:exon
so has part: feature:1072994-1073040:-1:exon
so has part: feature:1072505-1072576:-1:exon
so has part: feature:1071224-1071310:-1:exon
so has part: feature:1065653-1065815:-1:exon
so has part: feature:1063589-1063709:-1:exon
so has part: feature:1061933-1062064:-1:exon
so has part: feature:1060827-1061033:-1:exon
so has part: feature:1058652-1058772:-1:exon
so has part: feature:1058234-1058416:-1:exon
so has part: feature:1057935-1058024:-1:exon
so has part: feature:1056455-1056547:-1:exon
so has part: feature:1054103-1054159:-1:exon
so has part: feature:1051254-1051430:-1:exon
so has part: feature:1050987-1051096:-1:exon
so has part: feature:1050668-1050827:-1:exon
so has part: feature:1050333-1050389:-1:exon

XP_031299678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1095246-1095347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077855-1078002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074519-1074557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072994-1073040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072505-1072576:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071224-1071310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1065653-1065815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1063589-1063709:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061933-1062064:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1060827-1061033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058652-1058772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1058234-1058416:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1057935-1058024:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1056455-1056547:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1054103-1054159:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1051254-1051430:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1050987-1051096:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1050668-1050827:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1050333-1050389:-1:exon

DNM1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DNM1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-1-like protein isoform X4
translation: MEALIPVINKLQDVFNTVGADIIQLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKSATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQVIEKCTRFQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKSSKVPSALAPASQEPSPAASAEADGKAASGGGGVGDGVQEPATGNWRGMLKTSKAEELLAEEKSKPIPIMPASPQKGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRETHLW
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050333..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1053336..1053413,1054103..1054159,1056455..1056547,1057935..1058024,1058234..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1074519..1074557,1077855..1078002,1095246..1095347))
location: region:1050333-1095347:-1
so has part: feature:1095246-1095347:-1:exon
so has part: feature:1077855-1078002:-1:exon
so has part: feature:1074519-1074557:-1:exon
so has part: feature:1072994-1073040:-1:exon
so has part: feature:1072505-1072576:-1:exon
so has part: feature:1071224-1071310:-1:exon
so has part: feature:1065653-1065815:-1:exon
so has part: feature:1063589-1063709:-1:exon
so has part: feature:1061933-1062064:-1:exon
so has part: feature:1060827-1061033:-1:exon
so has part: feature:1058652-1058772:-1:exon
so has part: feature:1058234-1058416:-1:exon
so has part: feature:1057935-1058024:-1:exon
so has part: feature:1056455-1056547:-1:exon
so has part: feature:1054103-1054159:-1:exon
so has part: feature:1053336-1053413:-1:exon
so has part: feature:1051254-1051430:-1:exon
so has part: feature:1050987-1051096:-1:exon
so has part: feature:1050668-1050827:-1:exon
so has part: feature:1050333-1050389:-1:exon

XP_031299677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1095246-1095347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077855-1078002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074519-1074557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072994-1073040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072505-1072576:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071224-1071310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1065653-1065815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1063589-1063709:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061933-1062064:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1060827-1061033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058652-1058772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1058234-1058416:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1057935-1058024:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1056455-1056547:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1054103-1054159:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1053336-1053413:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1051254-1051430:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1050987-1051096:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1050668-1050827:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1050333-1050389:-1:exon

DNM1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DNM1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-1-like protein isoform X2
translation: MEALIPVINKLQDVFNTVGADIIQLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKSATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQVIEKCTRFQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKSSKVPSALAPASQEPSPAASAEADGKLIQDSRRETKNAASGGGGVGDGVQEPATGNWRGMLKTSKAEELLAEEKSKPIPIMPASPQKGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRETHLW
SIO_010081: DNM1L
subclass of: SO_0000673
so part of: DNM1L
location: complement(join(1050333..1050389,1050668..1050827,1050987..1051096,1051254..1051430,1052987..1053019,1053336..1053413,1054103..1054159,1056455..1056547,1057935..1058024,1058234..1058416,1058652..1058772,1060827..1061033,1061933..1062064,1063589..1063709,1065653..1065815,1071224..1071310,1072505..1072576,1072994..1073040,1074519..1074557,1077855..1078002,1095246..1095347))
location: region:1050333-1095347:-1
so has part: feature:1095246-1095347:-1:exon
so has part: feature:1077855-1078002:-1:exon
so has part: feature:1074519-1074557:-1:exon
so has part: feature:1072994-1073040:-1:exon
so has part: feature:1072505-1072576:-1:exon
so has part: feature:1071224-1071310:-1:exon
so has part: feature:1065653-1065815:-1:exon
so has part: feature:1063589-1063709:-1:exon
so has part: feature:1061933-1062064:-1:exon
so has part: feature:1060827-1061033:-1:exon
so has part: feature:1058652-1058772:-1:exon
so has part: feature:1058234-1058416:-1:exon
so has part: feature:1057935-1058024:-1:exon
so has part: feature:1056455-1056547:-1:exon
so has part: feature:1054103-1054159:-1:exon
so has part: feature:1053336-1053413:-1:exon
so has part: feature:1052987-1053019:-1:exon
so has part: feature:1051254-1051430:-1:exon
so has part: feature:1050987-1051096:-1:exon
so has part: feature:1050668-1050827:-1:exon
so has part: feature:1050333-1050389:-1:exon

XP_031299676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1095246-1095347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077855-1078002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074519-1074557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072994-1073040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072505-1072576:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071224-1071310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1065653-1065815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1063589-1063709:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061933-1062064:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1060827-1061033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058652-1058772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1058234-1058416:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1057935-1058024:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1056455-1056547:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1054103-1054159:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1053336-1053413:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1052987-1053019:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1051254-1051430:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1050987-1051096:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1050668-1050827:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1050333-1050389:-1:exon

FGD4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1123743..1292191)
location: region:1123743-1292191:-1
so has part: feature:1123743-1292191:-1:exon
subclass of: SO_0000010

105084507
type: Gene
SIO_000068: ncbigene

position:1123743:-1
position: 1123743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292191:-1
position: 1292191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1123743-1292191:-1:exon

FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031443820.1
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1123743..1129259,1130310..1130450,1132611..1132751,1135720..1135845,1136175..1136261,1136470..1136500,1139902..1140074,1145824..1145970,1146299..1146357,1148700..1148838,1154075..1154231,1154668..1154813,1156828..1156917,1173050..1173548,1177660..1177843,1185788..1185940,1282075..1282203,1291489..1292191))
location: region:1123743-1292191:-1
so has part: feature:1291489-1292191:-1:exon
so has part: feature:1282075-1282203:-1:exon
so has part: feature:1185788-1185940:-1:exon
so has part: feature:1177660-1177843:-1:exon
so has part: feature:1173050-1173548:-1:exon
so has part: feature:1156828-1156917:-1:exon
so has part: feature:1154668-1154813:-1:exon
so has part: feature:1154075-1154231:-1:exon
so has part: feature:1148700-1148838:-1:exon
so has part: feature:1146299-1146357:-1:exon
so has part: feature:1145824-1145970:-1:exon
so has part: feature:1139902-1140074:-1:exon
so has part: feature:1136470-1136500:-1:exon
so has part: feature:1136175-1136261:-1:exon
so has part: feature:1135720-1135845:-1:exon
so has part: feature:1132611-1132751:-1:exon
so has part: feature:1130310-1130450:-1:exon
so has part: feature:1123743-1129259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1291489-1292191:-1:exon

position:1291489:-1
position: 1291489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1282075-1282203:-1:exon

position:1282075:-1
position: 1282075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282203:-1
position: 1282203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1185788-1185940:-1:exon

position:1185788:-1
position: 1185788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185940:-1
position: 1185940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1177660-1177843:-1:exon

position:1177660:-1
position: 1177660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177843:-1
position: 1177843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1173050-1173548:-1:exon

position:1173050:-1
position: 1173050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173548:-1
position: 1173548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1156828-1156917:-1:exon

position:1156828:-1
position: 1156828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156917:-1
position: 1156917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1154668-1154813:-1:exon

position:1154668:-1
position: 1154668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154813:-1
position: 1154813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1154075-1154231:-1:exon

position:1154075:-1
position: 1154075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154231:-1
position: 1154231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1148700-1148838:-1:exon

position:1148700:-1
position: 1148700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148838:-1
position: 1148838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1146299-1146357:-1:exon

position:1146299:-1
position: 1146299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146357:-1
position: 1146357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1145824-1145970:-1:exon

position:1145824:-1
position: 1145824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145970:-1
position: 1145970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1139902-1140074:-1:exon

position:1139902:-1
position: 1139902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140074:-1
position: 1140074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1136470-1136500:-1:exon

position:1136470:-1
position: 1136470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136500:-1
position: 1136500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1136175-1136261:-1:exon

position:1136175:-1
position: 1136175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136261:-1
position: 1136261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1135720-1135845:-1:exon

position:1135720:-1
position: 1135720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135845:-1
position: 1135845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1132611-1132751:-1:exon

position:1132611:-1
position: 1132611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132751:-1
position: 1132751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1130310-1130450:-1:exon

position:1130310:-1
position: 1130310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130450:-1
position: 1130450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1123743-1129259:-1:exon

position:1129259:-1
position: 1129259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_031443821.1
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1123743..1129259,1130310..1130450,1132611..1132751,1135720..1135845,1136169..1136261,1136470..1136500,1139902..1140074,1145824..1145970,1146299..1146357,1148700..1148838,1154075..1154231,1154668..1154813,1156828..1156917,1173050..1173548,1177660..1177843,1185788..1185940,1291489..1292180))
location: region:1123743-1292180:-1
so has part: feature:1291489-1292180:-1:exon
so has part: feature:1185788-1185940:-1:exon
so has part: feature:1177660-1177843:-1:exon
so has part: feature:1173050-1173548:-1:exon
so has part: feature:1156828-1156917:-1:exon
so has part: feature:1154668-1154813:-1:exon
so has part: feature:1154075-1154231:-1:exon
so has part: feature:1148700-1148838:-1:exon
so has part: feature:1146299-1146357:-1:exon
so has part: feature:1145824-1145970:-1:exon
so has part: feature:1139902-1140074:-1:exon
so has part: feature:1136470-1136500:-1:exon
so has part: feature:1136169-1136261:-1:exon
so has part: feature:1135720-1135845:-1:exon
so has part: feature:1132611-1132751:-1:exon
so has part: feature:1130310-1130450:-1:exon
so has part: feature:1123743-1129259:-1:exon

position:1292180:-1
position: 1292180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291489-1292180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185788-1185940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177660-1177843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1173050-1173548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1156828-1156917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1154668-1154813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1154075-1154231:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148700-1148838:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1146299-1146357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1145824-1145970:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1139902-1140074:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1136470-1136500:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1136169-1136261:-1:exon

position:1136169:-1
position: 1136169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1135720-1135845:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1132611-1132751:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1130310-1130450:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1123743-1129259:-1:exon

FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_031443819.1
SIO_010081: FGD4
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FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031443824.1
SIO_010081: FGD4
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FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_031443822.1
SIO_010081: FGD4
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FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031443823.1
SIO_010081: FGD4
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so part of: FGD4
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FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_010974643.2
SIO_010081: FGD4
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FGD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FGD4
product: FYVE, RhoGEF and PH domain containing 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_031443826.1
SIO_010081: FGD4
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FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X3
translation: MQATPPGVPPPLRSPPGARLQPDEGGRGRAAASERGRMSGEGDYNFRRVAIRRKSNPSYLPPGTPRPWSRPPSHLGWAEKATFRSQAPAGALGCSICPKITRIPPSLKSSTATLVDQNVSAEEAQGINGKTPAKHAAASPKPQVPPKPFHLQNSPSSNIHQTPRHKALSSAKPRMEEVKPASASCVSKEKPSKVSDLISRFEGGSPLSNYSDLKKDPAVNLNVPRTPGRHGLTTTPQQKLLSQCSPRKQGHNPDQAQGVQTRVANGIIAAQNQMECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENGESPLELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1129002..1129259,1130310..1130450,1132611..1132751,1135720..1135845,1136169..1136261,1136470..1136500,1139902..1140074,1145824..1145970,1146299..1146357,1148700..1148838,1154075..1154231,1154668..1154813,1156828..1156917,1173050..1173548,1177660..1177843,1185788..1185940,1291489..1291765))
location: region:1129002-1291765:-1
so has part: feature:1291489-1291765:-1:exon
so has part: feature:1185788-1185940:-1:exon
so has part: feature:1177660-1177843:-1:exon
so has part: feature:1173050-1173548:-1:exon
so has part: feature:1156828-1156917:-1:exon
so has part: feature:1154668-1154813:-1:exon
so has part: feature:1154075-1154231:-1:exon
so has part: feature:1148700-1148838:-1:exon
so has part: feature:1146299-1146357:-1:exon
so has part: feature:1145824-1145970:-1:exon
so has part: feature:1139902-1140074:-1:exon
so has part: feature:1136470-1136500:-1:exon
so has part: feature:1136169-1136261:-1:exon
so has part: feature:1135720-1135845:-1:exon
so has part: feature:1132611-1132751:-1:exon
so has part: feature:1130310-1130450:-1:exon
so has part: feature:1129002-1129259:-1:exon

XP_031299681.1
type: Protein
SIO_000068: ncbiprotein

position:1129002:-1
position: 1129002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291765:-1
position: 1291765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291489-1291765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185788-1185940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177660-1177843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1173050-1173548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1156828-1156917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1154668-1154813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1154075-1154231:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148700-1148838:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1146299-1146357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1145824-1145970:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1139902-1140074:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1136470-1136500:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1136169-1136261:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1135720-1135845:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1132611-1132751:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1130310-1130450:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1129002-1129259:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X2
translation: MQATPPGVPPPLRSPPGARLQPDEGGRGRAAASERGRMSGEGDYNFRRVAIRRKSNPSYLPPGTPRPWSRPPSHLGWAEKATFRSQAPAGALDPCILHDKFCIFKIPPKLGSFSPAASISVFPMDQAVMLGPRNQGCSICPKITRIPPSLKSSTATLVDQNVSAEEAQGINGKTPAKHAAASPKPQVPPKPFHLQNSPSSNIHQTPRHKALSSAKPRMEEVKPASASCVSKEKPSKVSDLISRFEGGSPLSNYSDLKKDPAVNLNVPRTPGRHGLTTTPQQKLLSQCSPRKQGHNPDQAQGVQTRVANGIIAAQNQMECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENGESPLELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLETAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1129002..1129259,1130310..1130450,1132611..1132751,1135720..1135845,1136175..1136261,1136470..1136500,1139902..1140074,1145824..1145970,1146299..1146357,1148700..1148838,1154075..1154231,1154668..1154813,1156828..1156917,1173050..1173548,1177660..1177843,1185788..1185940,1282075..1282203,1291489..1291765))
location: region:1129002-1291765:-1
so has part: feature:1291489-1291765:-1:exon
so has part: feature:1282075-1282203:-1:exon
so has part: feature:1185788-1185940:-1:exon
so has part: feature:1177660-1177843:-1:exon
so has part: feature:1173050-1173548:-1:exon
so has part: feature:1156828-1156917:-1:exon
so has part: feature:1154668-1154813:-1:exon
so has part: feature:1154075-1154231:-1:exon
so has part: feature:1148700-1148838:-1:exon
so has part: feature:1146299-1146357:-1:exon
so has part: feature:1145824-1145970:-1:exon
so has part: feature:1139902-1140074:-1:exon
so has part: feature:1136470-1136500:-1:exon
so has part: feature:1136175-1136261:-1:exon
so has part: feature:1135720-1135845:-1:exon
so has part: feature:1132611-1132751:-1:exon
so has part: feature:1130310-1130450:-1:exon
so has part: feature:1129002-1129259:-1:exon

XP_031299680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1291489-1291765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282075-1282203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185788-1185940:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1177660-1177843:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1173050-1173548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1156828-1156917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1154668-1154813:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1154075-1154231:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1148700-1148838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1146299-1146357:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1145824-1145970:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1139902-1140074:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1136470-1136500:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1136175-1136261:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1135720-1135845:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1132611-1132751:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1130310-1130450:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1129002-1129259:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X1
translation: MQATPPGVPPPLRSPPGARLQPDEGGRGRAAASERGRMSGEGDYNFRRVAIRRKSNPSYLPPGTPRPWSRPPSHLGWAEKATFRSQAPAGALDPCILHDKFCIFKIPPKLGSFSPAASISVFPMDQAVMLGPRNQGCSICPKITRIPPSLKSSTATLVDQNVSAEEAQGINGKTPAKHAAASPKPQVPPKPFHLQNSPSSNIHQTPRHKALSSAKPRMEEVKPASASCVSKEKPSKVSDLISRFEGGSPLSNYSDLKKDPAVNLNVPRTPGRHGLTTTPQQKLLSQCSPRKQGHNPDQAQGVQTRVANGIIAAQNQMECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENGESPLELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1129002..1129259,1130310..1130450,1132611..1132751,1135720..1135845,1136169..1136261,1136470..1136500,1139902..1140074,1145824..1145970,1146299..1146357,1148700..1148838,1154075..1154231,1154668..1154813,1156828..1156917,1173050..1173548,1177660..1177843,1185788..1185940,1282075..1282203,1291489..1291765))
location: region:1129002-1291765:-1
so has part: feature:1291489-1291765:-1:exon
so has part: feature:1282075-1282203:-1:exon
so has part: feature:1185788-1185940:-1:exon
so has part: feature:1177660-1177843:-1:exon
so has part: feature:1173050-1173548:-1:exon
so has part: feature:1156828-1156917:-1:exon
so has part: feature:1154668-1154813:-1:exon
so has part: feature:1154075-1154231:-1:exon
so has part: feature:1148700-1148838:-1:exon
so has part: feature:1146299-1146357:-1:exon
so has part: feature:1145824-1145970:-1:exon
so has part: feature:1139902-1140074:-1:exon
so has part: feature:1136470-1136500:-1:exon
so has part: feature:1136169-1136261:-1:exon
so has part: feature:1135720-1135845:-1:exon
so has part: feature:1132611-1132751:-1:exon
so has part: feature:1130310-1130450:-1:exon
so has part: feature:1129002-1129259:-1:exon

XP_031299679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1291489-1291765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282075-1282203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185788-1185940:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1177660-1177843:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1173050-1173548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1156828-1156917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1154668-1154813:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1154075-1154231:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1148700-1148838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1146299-1146357:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1145824-1145970:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1139902-1140074:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1136470-1136500:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1136169-1136261:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1135720-1135845:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1132611-1132751:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1130310-1130450:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1129002-1129259:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X5
translation: MGGCCSICPKITRIPPSLKSSTATLVDQNVSAEEAQGINGKTPAKHAAASPKPQVPPKPFHLQNSPSSNIHQTPRHKALSSAKPRMEEVKPASASCVSKEKPSKVSDLISRFEGGSPLSNYSDLKKDPAVNLNVPRTPGRHGLTTTPQQKLLSQCSPRKQGHNPDQAQGVQTRVANGIIAAQNQMECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENGESPLELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1129002..1129259,1130310..1130450,1132611..1132751,1135720..1135845,1136169..1136261,1136470..1136500,1139902..1140074,1145824..1145970,1146299..1146357,1148700..1148838,1154075..1154231,1154668..1154813,1156828..1156917,1173050..1173548,1177660..1177843,1185788..1185940,1236362..1236371))
location: region:1129002-1236371:-1
so has part: feature:1236362-1236371:-1:exon
so has part: feature:1185788-1185940:-1:exon
so has part: feature:1177660-1177843:-1:exon
so has part: feature:1173050-1173548:-1:exon
so has part: feature:1156828-1156917:-1:exon
so has part: feature:1154668-1154813:-1:exon
so has part: feature:1154075-1154231:-1:exon
so has part: feature:1148700-1148838:-1:exon
so has part: feature:1146299-1146357:-1:exon
so has part: feature:1145824-1145970:-1:exon
so has part: feature:1139902-1140074:-1:exon
so has part: feature:1136470-1136500:-1:exon
so has part: feature:1136169-1136261:-1:exon
so has part: feature:1135720-1135845:-1:exon
so has part: feature:1132611-1132751:-1:exon
so has part: feature:1130310-1130450:-1:exon
so has part: feature:1129002-1129259:-1:exon

XP_031299682.1
type: Protein
SIO_000068: ncbiprotein

position:1236371:-1
position: 1236371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1236362-1236371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185788-1185940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177660-1177843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1173050-1173548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1156828-1156917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1154668-1154813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1154075-1154231:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148700-1148838:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1146299-1146357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1145824-1145970:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1139902-1140074:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1136470-1136500:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1136169-1136261:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1135720-1135845:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1132611-1132751:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1130310-1130450:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1129002-1129259:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X4
translation: MSTDQGCSICPKITRIPPSLKSSTATLVDQNVSAEEAQGINGKTPAKHAAASPKPQVPPKPFHLQNSPSSNIHQTPRHKALSSAKPRMEEVKPASASCVSKEKPSKVSDLISRFEGGSPLSNYSDLKKDPAVNLNVPRTPGRHGLTTTPQQKLLSQCSPRKQGHNPDQAQGVQTRVANGIIAAQNQMECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENGESPLELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1129002..1129259,1130310..1130450,1132611..1132751,1135720..1135845,1136169..1136261,1136470..1136500,1139902..1140074,1145824..1145970,1146299..1146357,1148700..1148838,1154075..1154231,1154668..1154813,1156828..1156917,1173050..1173548,1177660..1177843,1185788..1185940,1203369..1203384))
location: region:1129002-1203384:-1
so has part: feature:1203369-1203384:-1:exon
so has part: feature:1185788-1185940:-1:exon
so has part: feature:1177660-1177843:-1:exon
so has part: feature:1173050-1173548:-1:exon
so has part: feature:1156828-1156917:-1:exon
so has part: feature:1154668-1154813:-1:exon
so has part: feature:1154075-1154231:-1:exon
so has part: feature:1148700-1148838:-1:exon
so has part: feature:1146299-1146357:-1:exon
so has part: feature:1145824-1145970:-1:exon
so has part: feature:1139902-1140074:-1:exon
so has part: feature:1136470-1136500:-1:exon
so has part: feature:1136169-1136261:-1:exon
so has part: feature:1135720-1135845:-1:exon
so has part: feature:1132611-1132751:-1:exon
so has part: feature:1130310-1130450:-1:exon
so has part: feature:1129002-1129259:-1:exon

XP_010972945.1
type: Protein
SIO_000068: ncbiprotein

position:1203384:-1
position: 1203384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203369-1203384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185788-1185940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177660-1177843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1173050-1173548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1156828-1156917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1154668-1154813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1154075-1154231:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148700-1148838:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1146299-1146357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1145824-1145970:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1139902-1140074:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1136470-1136500:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1136169-1136261:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1135720-1135845:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1132611-1132751:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1130310-1130450:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1129002-1129259:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X6
translation: MEEVKPASASCVSKEKPSKVSDLISRFEGGSPLSNYSDLKKDPAVNLNVPRTPGRHGLTTTPQQKLLSQCSPRKQGHNPDQAQGVQTRVANGIIAAQNQMECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENGESPLELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1129002..1129259,1130310..1130450,1132611..1132751,1135720..1135845,1136169..1136261,1136470..1136500,1139902..1140074,1145824..1145970,1146299..1146357,1148700..1148838,1154075..1154231,1154668..1154813,1156828..1156917,1173050..1173548,1177660..1177751))
location: region:1129002-1177751:-1
so has part: feature:1177660-1177751:-1:exon
so has part: feature:1173050-1173548:-1:exon
so has part: feature:1156828-1156917:-1:exon
so has part: feature:1154668-1154813:-1:exon
so has part: feature:1154075-1154231:-1:exon
so has part: feature:1148700-1148838:-1:exon
so has part: feature:1146299-1146357:-1:exon
so has part: feature:1145824-1145970:-1:exon
so has part: feature:1139902-1140074:-1:exon
so has part: feature:1136470-1136500:-1:exon
so has part: feature:1136169-1136261:-1:exon
so has part: feature:1135720-1135845:-1:exon
so has part: feature:1132611-1132751:-1:exon
so has part: feature:1130310-1130450:-1:exon
so has part: feature:1129002-1129259:-1:exon

XP_031299683.1
type: Protein
SIO_000068: ncbiprotein

position:1177751:-1
position: 1177751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177660-1177751:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1173050-1173548:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1156828-1156917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1154668-1154813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1154075-1154231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1148700-1148838:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1146299-1146357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1145824-1145970:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1139902-1140074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1136470-1136500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1136169-1136261:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1135720-1135845:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1132611-1132751:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1130310-1130450:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1129002-1129259:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X6
translation: MEEVKPASASCVSKEKPSKVSDLISRFEGGSPLSNYSDLKKDPAVNLNVPRTPGRHGLTTTPQQKLLSQCSPRKQGHNPDQAQGVQTRVANGIIAAQNQMECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENGESPLELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1129002..1129259,1130310..1130450,1132611..1132751,1135720..1135845,1136169..1136261,1136470..1136500,1139902..1140074,1145824..1145970,1146299..1146357,1148700..1148838,1154075..1154231,1154668..1154813,1156828..1156917,1173050..1173548,1177660..1177751))
location: region:1129002-1177751:-1
so has part: feature:1177660-1177751:-1:exon
so has part: feature:1173050-1173548:-1:exon
so has part: feature:1156828-1156917:-1:exon
so has part: feature:1154668-1154813:-1:exon
so has part: feature:1154075-1154231:-1:exon
so has part: feature:1148700-1148838:-1:exon
so has part: feature:1146299-1146357:-1:exon
so has part: feature:1145824-1145970:-1:exon
so has part: feature:1139902-1140074:-1:exon
so has part: feature:1136470-1136500:-1:exon
so has part: feature:1136169-1136261:-1:exon
so has part: feature:1135720-1135845:-1:exon
so has part: feature:1132611-1132751:-1:exon
so has part: feature:1130310-1130450:-1:exon
so has part: feature:1129002-1129259:-1:exon

XP_031299684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1177660-1177751:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1173050-1173548:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1156828-1156917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1154668-1154813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1154075-1154231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1148700-1148838:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1146299-1146357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1145824-1145970:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1139902-1140074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1136470-1136500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1136169-1136261:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1135720-1135845:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1132611-1132751:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1130310-1130450:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1129002-1129259:-1:exon

FGD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FGD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 4 isoform X7
translation: MECEEDKAAALSAETPIQTSEPSPDTSLVNGEREETTTGPASPTANHCDGNADDRTPGVGPALPLGEGRADAETKVQERENGESPLELDQLDQHHEMKETDEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPAEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGFDHAMELVKNMTERIPQFKSVVEDIQKQRICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKLPPDSPDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIHLEVSTAELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGKLSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVIPKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEELKQKWLKIILLAVTGETPDGPSKQPDALDEHPESKRQSEC
SIO_010081: FGD4
subclass of: SO_0000673
so part of: FGD4
location: complement(join(1129002..1129259,1130310..1130450,1132611..1132751,1135720..1135845,1136169..1136261,1136470..1136500,1139902..1140074,1145824..1145970,1146299..1146357,1148700..1148838,1154075..1154231,1154668..1154813,1156828..1156917,1173050..1173343))
location: region:1129002-1173343:-1
so has part: feature:1173050-1173343:-1:exon
so has part: feature:1156828-1156917:-1:exon
so has part: feature:1154668-1154813:-1:exon
so has part: feature:1154075-1154231:-1:exon
so has part: feature:1148700-1148838:-1:exon
so has part: feature:1146299-1146357:-1:exon
so has part: feature:1145824-1145970:-1:exon
so has part: feature:1139902-1140074:-1:exon
so has part: feature:1136470-1136500:-1:exon
so has part: feature:1136169-1136261:-1:exon
so has part: feature:1135720-1135845:-1:exon
so has part: feature:1132611-1132751:-1:exon
so has part: feature:1130310-1130450:-1:exon
so has part: feature:1129002-1129259:-1:exon

XP_031299686.1
type: Protein
SIO_000068: ncbiprotein

position:1173343:-1
position: 1173343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173050-1173343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1156828-1156917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1154668-1154813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1154075-1154231:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1148700-1148838:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1146299-1146357:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1145824-1145970:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1139902-1140074:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1136470-1136500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1136169-1136261:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1135720-1135845:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1132611-1132751:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1130310-1130450:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1129002-1129259:-1:exon

BICD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1307618..1480084)
location: region:1307618-1480084:-1
so has part: feature:1307618-1480084:-1:exon
subclass of: SO_0000010

105084506
type: Gene
SIO_000068: ncbigene

position:1307618:-1
position: 1307618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480084:-1
position: 1480084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1307618-1480084:-1:exon

BICD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BICD1
product: BICD cargo adaptor 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031443830.1
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1307618..1313852,1319040..1319115,1341703..1341896,1342884..1343201,1345844..1345995,1349794..1350885,1361277..1361702,1368241..1368393,1397764..1397976,1479413..1480084))
location: region:1307618-1480084:-1
so has part: feature:1479413-1480084:-1:exon
so has part: feature:1397764-1397976:-1:exon
so has part: feature:1368241-1368393:-1:exon
so has part: feature:1361277-1361702:-1:exon
so has part: feature:1349794-1350885:-1:exon
so has part: feature:1345844-1345995:-1:exon
so has part: feature:1342884-1343201:-1:exon
so has part: feature:1341703-1341896:-1:exon
so has part: feature:1319040-1319115:-1:exon
so has part: feature:1307618-1313852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1479413-1480084:-1:exon

position:1479413:-1
position: 1479413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1397764-1397976:-1:exon

position:1397764:-1
position: 1397764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397976:-1
position: 1397976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1368241-1368393:-1:exon

position:1368241:-1
position: 1368241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368393:-1
position: 1368393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1361277-1361702:-1:exon

position:1361277:-1
position: 1361277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361702:-1
position: 1361702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1349794-1350885:-1:exon

position:1349794:-1
position: 1349794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350885:-1
position: 1350885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1345844-1345995:-1:exon

position:1345844:-1
position: 1345844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345995:-1
position: 1345995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1342884-1343201:-1:exon

position:1342884:-1
position: 1342884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1343201:-1
position: 1343201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1341703-1341896:-1:exon

position:1341703:-1
position: 1341703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1341896:-1
position: 1341896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1319040-1319115:-1:exon

position:1319040:-1
position: 1319040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319115:-1
position: 1319115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1307618-1313852:-1:exon

position:1313852:-1
position: 1313852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BICD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BICD1
product: BICD cargo adaptor 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_031443829.1
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1307618..1313852,1342994..1343201,1345844..1345995,1349794..1350885,1361277..1361702,1368241..1368393,1397764..1397976,1479413..1479625))
location: region:1307618-1479625:-1
so has part: feature:1479413-1479625:-1:exon
so has part: feature:1397764-1397976:-1:exon
so has part: feature:1368241-1368393:-1:exon
so has part: feature:1361277-1361702:-1:exon
so has part: feature:1349794-1350885:-1:exon
so has part: feature:1345844-1345995:-1:exon
so has part: feature:1342994-1343201:-1:exon
so has part: feature:1307618-1313852:-1:exon

position:1479625:-1
position: 1479625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479413-1479625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397764-1397976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368241-1368393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361277-1361702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1349794-1350885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345844-1345995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1342994-1343201:-1:exon

position:1342994:-1
position: 1342994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1307618-1313852:-1:exon

BICD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BICD1
product: BICD cargo adaptor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031443827.1
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1307618..1313852,1319040..1319115,1342994..1343201,1345844..1345995,1349794..1350885,1361277..1361702,1368241..1368393,1397764..1397976,1479413..1479625))
location: region:1307618-1479625:-1
so has part: feature:1479413-1479625:-1:exon
so has part: feature:1397764-1397976:-1:exon
so has part: feature:1368241-1368393:-1:exon
so has part: feature:1361277-1361702:-1:exon
so has part: feature:1349794-1350885:-1:exon
so has part: feature:1345844-1345995:-1:exon
so has part: feature:1342994-1343201:-1:exon
so has part: feature:1319040-1319115:-1:exon
so has part: feature:1307618-1313852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1479413-1479625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397764-1397976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368241-1368393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361277-1361702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1349794-1350885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345844-1345995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1342994-1343201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1319040-1319115:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1307618-1313852:-1:exon

BICD1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: BICD1
product: BICD cargo adaptor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004134007.1
SIO_010081: BICD1
so part of: BICD1
location: complement(join(1307618..1313852,1341703..1341896,1342994..1343201,1345844..1345995,1349794..1350885,1361277..1361702,1368241..1368393,1397764..1397976,1479413..1479625))
location: region:1307618-1479625:-1
so has part: feature:1479413-1479625:-1:exon
so has part: feature:1397764-1397976:-1:exon
so has part: feature:1368241-1368393:-1:exon
so has part: feature:1361277-1361702:-1:exon
so has part: feature:1349794-1350885:-1:exon
so has part: feature:1345844-1345995:-1:exon
so has part: feature:1342994-1343201:-1:exon
so has part: feature:1341703-1341896:-1:exon
so has part: feature:1307618-1313852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1479413-1479625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397764-1397976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368241-1368393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361277-1361702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1349794-1350885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345844-1345995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1342994-1343201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1341703-1341896:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1307618-1313852:-1:exon

BICD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 1 isoform X5
translation: MAAEEVLQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYDSLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNVQAENERLTAVVQDLKENNEMLELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNSLRKELSQYITLGDNHIGISVDGLKFAEDGAEPNNDDKMNGHVHAPLVKLNGDYRTPTLRKGEALHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMKGLQSSKELKELDGEKGRDSGEEAHDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTSKESGEKMAHMEKELQKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSPEPVSKENTEASKEPSPTKTPTVSPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKVSGEASVTVPTIDTSLLHSQGPQTPSIRVRSGTQRKRQFSPSLCDQSRPRTSGASYLQNLLRVPPDPTSTESFLLKGPPSMSEFIQGHRLSKEKRLTVAPPDCQQPAASVPPQCSQLAGRQDCPTVSPDTAVPEEQPHPSSQCAPLHCLSKPPHP
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1313765..1313852,1319040..1319115,1341703..1341896,1342884..1343201,1345844..1345995,1349794..1350885,1361277..1361702,1368241..1368393,1397764..1397976,1479413..1479625))
location: region:1313765-1479625:-1
so has part: feature:1479413-1479625:-1:exon
so has part: feature:1397764-1397976:-1:exon
so has part: feature:1368241-1368393:-1:exon
so has part: feature:1361277-1361702:-1:exon
so has part: feature:1349794-1350885:-1:exon
so has part: feature:1345844-1345995:-1:exon
so has part: feature:1342884-1343201:-1:exon
so has part: feature:1341703-1341896:-1:exon
so has part: feature:1319040-1319115:-1:exon
so has part: feature:1313765-1313852:-1:exon

XP_031299690.1
type: Protein
SIO_000068: ncbiprotein

position:1313765:-1
position: 1313765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479413-1479625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397764-1397976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368241-1368393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361277-1361702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1349794-1350885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345844-1345995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1342884-1343201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1341703-1341896:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1319040-1319115:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1313765-1313852:-1:exon

BICD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 1 isoform X4
translation: MAAEEVLQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYDSLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNVQAENERLTAVVQDLKENNEMLELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNSLRKELSQYITLGDNHIGISVDGLKFAEDGAEPNNDDKMNGHVHAPLVKLNGDYRTPTLRKGEALHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMKGLQSSKELKELDGEKGRDSGEEAHDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTSKESGEKMAHMEKELQKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSPEPVSKENTEASKEPSPTKTPTVSPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKS
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1313847..1313852,1342994..1343201,1345844..1345995,1349794..1350885,1361277..1361702,1368241..1368393,1397764..1397976,1479413..1479625))
location: region:1313847-1479625:-1
so has part: feature:1479413-1479625:-1:exon
so has part: feature:1397764-1397976:-1:exon
so has part: feature:1368241-1368393:-1:exon
so has part: feature:1361277-1361702:-1:exon
so has part: feature:1349794-1350885:-1:exon
so has part: feature:1345844-1345995:-1:exon
so has part: feature:1342994-1343201:-1:exon
so has part: feature:1313847-1313852:-1:exon

XP_031299689.1
type: Protein
SIO_000068: ncbiprotein

position:1313847:-1
position: 1313847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479413-1479625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397764-1397976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368241-1368393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361277-1361702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1349794-1350885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345844-1345995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1342994-1343201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1313847-1313852:-1:exon

BICD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 1 isoform X2
translation: MAAEEVLQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYDSLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNVQAENERLTAVVQDLKENNEMLELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNSLRKELSQYITLGDNHIGISVDGLKFAEDGAEPNNDDKMNGHVHAPLVKLNGDYRTPTLRKGEALHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMKGLQSSKELKELDGEKGRDSGEEAHDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTSKESGEKMAHMEKELQKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSPEPVSKENTEASKEPSPTKTPTVSPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKIVSSLLPPYRHSAHN
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1319068..1319115,1342994..1343201,1345844..1345995,1349794..1350885,1361277..1361702,1368241..1368393,1397764..1397976,1479413..1479625))
location: region:1319068-1479625:-1
so has part: feature:1479413-1479625:-1:exon
so has part: feature:1397764-1397976:-1:exon
so has part: feature:1368241-1368393:-1:exon
so has part: feature:1361277-1361702:-1:exon
so has part: feature:1349794-1350885:-1:exon
so has part: feature:1345844-1345995:-1:exon
so has part: feature:1342994-1343201:-1:exon
so has part: feature:1319068-1319115:-1:exon

XP_031299687.1
type: Protein
SIO_000068: ncbiprotein

position:1319068:-1
position: 1319068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479413-1479625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397764-1397976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368241-1368393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361277-1361702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1349794-1350885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345844-1345995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1342994-1343201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1319068-1319115:-1:exon

BICD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BICD1
product: BICD cargo adaptor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031443828.1
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1340227..1341896,1342994..1343201,1345844..1345995,1349794..1350885,1361277..1361702,1368241..1368393,1397764..1397976,1479413..1479625))
location: region:1340227-1479625:-1
so has part: feature:1479413-1479625:-1:exon
so has part: feature:1397764-1397976:-1:exon
so has part: feature:1368241-1368393:-1:exon
so has part: feature:1361277-1361702:-1:exon
so has part: feature:1349794-1350885:-1:exon
so has part: feature:1345844-1345995:-1:exon
so has part: feature:1342994-1343201:-1:exon
so has part: feature:1340227-1341896:-1:exon

position:1340227:-1
position: 1340227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479413-1479625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397764-1397976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368241-1368393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361277-1361702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1349794-1350885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345844-1345995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1342994-1343201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1340227-1341896:-1:exon

BICD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 1 isoform X3
translation: MAAEEVLQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYDSLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNVQAENERLTAVVQDLKENNEMLELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNSLRKELSQYITLGDNHIGISVDGLKFAEDGAEPNNDDKMNGHVHAPLVKLNGDYRTPTLRKGEALHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMKGLQSSKELKELDGEKGRDSGEEAHDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTSKESGEKMAHMEKELQKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSPEPVSKENTEASKEPSPTKTPTVSPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKTIFTFPL
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1341873..1341896,1342994..1343201,1345844..1345995,1349794..1350885,1361277..1361702,1368241..1368393,1397764..1397976,1479413..1479625))
location: region:1341873-1479625:-1
so has part: feature:1479413-1479625:-1:exon
so has part: feature:1397764-1397976:-1:exon
so has part: feature:1368241-1368393:-1:exon
so has part: feature:1361277-1361702:-1:exon
so has part: feature:1349794-1350885:-1:exon
so has part: feature:1345844-1345995:-1:exon
so has part: feature:1342994-1343201:-1:exon
so has part: feature:1341873-1341896:-1:exon

XP_031299688.1
type: Protein
SIO_000068: ncbiprotein

position:1341873:-1
position: 1341873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479413-1479625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397764-1397976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368241-1368393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361277-1361702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1349794-1350885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345844-1345995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1342994-1343201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1341873-1341896:-1:exon

BICD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BICD1
product: BICD cargo adaptor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_010974641.2
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1342137..1343201,1345844..1345995,1349794..1350885,1361277..1361702,1368241..1368393,1397764..1397976,1479413..1479625))
location: region:1342137-1479625:-1
so has part: feature:1479413-1479625:-1:exon
so has part: feature:1397764-1397976:-1:exon
so has part: feature:1368241-1368393:-1:exon
so has part: feature:1361277-1361702:-1:exon
so has part: feature:1349794-1350885:-1:exon
so has part: feature:1345844-1345995:-1:exon
so has part: feature:1342137-1343201:-1:exon

position:1342137:-1
position: 1342137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479413-1479625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397764-1397976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368241-1368393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361277-1361702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1349794-1350885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345844-1345995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1342137-1343201:-1:exon

BICD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BICD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 1 isoform X1
translation: MAAEEVLQTVDHYKTEIERLTKELTETTHEKIQAAEYGLVVLEEKLTLKQQYDELEAEYDSLKQELEQLKEAFGQSFSIHRKVAEDGETREETLLQESASKEAYYLGKILEMQNELKQSRAVVTNVQAENERLTAVVQDLKENNEMLELQRIRMKDEIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNSLRKELSQYITLGDNHIGISVDGLKFAEDGAEPNNDDKMNGHVHAPLVKLNGDYRTPTLRKGEALHPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMKGLQSSKELKELDGEKGRDSGEEAHDYEVDINGLEILECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTEEKAKYESKIQMYDEQVTSLEKTSKESGEKMAHMEKELQKMTSIANENHNTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSPEPVSKENTEASKEPSPTKTPTVSPVITAPPSSPVLDTSDIRKEPMNIYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKVSGEASVTVPTIDTSLLHSQGPQTPSIRVRSGTQRKRYACSDLQSMVQWPDFS
SIO_010081: BICD1
subclass of: SO_0000673
so part of: BICD1
location: complement(join(1342832..1343201,1345844..1345995,1349794..1350885,1361277..1361702,1368241..1368393,1397764..1397976,1479413..1479625))
location: region:1342832-1479625:-1
so has part: feature:1479413-1479625:-1:exon
so has part: feature:1397764-1397976:-1:exon
so has part: feature:1368241-1368393:-1:exon
so has part: feature:1361277-1361702:-1:exon
so has part: feature:1349794-1350885:-1:exon
so has part: feature:1345844-1345995:-1:exon
so has part: feature:1342832-1343201:-1:exon

XP_010972943.1
type: Protein
SIO_000068: ncbiprotein

position:1342832:-1
position: 1342832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479413-1479625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1397764-1397976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368241-1368393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361277-1361702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1349794-1350885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345844-1345995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1342832-1343201:-1:exon

LOC105084505
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105084505
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1389066..1389701)
location: region:1389066-1389701:-1
so has part: feature:1389066-1389701:-1:exon

105084505
type: Gene
SIO_000068: ncbigene

position:1389066:-1
position: 1389066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389701:-1
position: 1389701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389066-1389701:-1:exon

LOC105084505
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105084505
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105084505
subclass of: SO_0000673
so part of: LOC105084505
location: complement(1389066..1389701)
location: region:1389066-1389701:-1
so has part: feature:1389066-1389701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1389066-1389701:-1:exon

LOC116150298
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150298
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1479751..1480671
location: region:1479751-1480671:1
so has part: feature:1479751-1480671:1:exon
subclass of: SO_0000010

116150298
type: Gene
SIO_000068: ncbigene

position:1479751:1
position: 1479751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480671:1
position: 1480671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479751-1480671:1:exon

LOC116150298
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC116150298
product: laforin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_031443790.1
SIO_010081: LOC116150298
subclass of: SO_0000673
so part of: LOC116150298
location: 1479751..1480671
location: region:1479751-1480671:1
so has part: feature:1479751-1480671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1479751-1480671:1:exon

LOC116150298
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC116150298
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: laforin-like
translation: MGEQGDAVTAPPAAAATPPETPATWRRRRGGSGACALRAGPYARSAAARHGPGCGGGGRGARILVFRGRGARSGGSRLRHDGPAAAAARATCSVGAAERVRNDAAPARSLSRSLPPCAPGRGSARGAGGGGRSRGGAGGRGRGGGTRRKIPRRLPPGGSAARGAAAQAPGREREGPPPGLAWPGPARPLAGAPPGGFARWTSRSRGVAWAPALWLRREPKLRRLPGTCAFPEEQLTVTNALGARASFFSPAGIAASFPGLRHPNTMLGSLPDARLGSRFRPFFLPPLAFPPCLSLAWPDSLPALSS
SIO_010081: LOC116150298
subclass of: SO_0000673
so part of: LOC116150298
location: 1479751..1480671
location: region:1479751-1480671:1
so has part: feature:1479751-1480671:1:exon

XP_031299650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1479751-1480671:1:exon

TRNAS-AGA
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAS-AGA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1510758..1510829
location: region:1510758-1510829:1
so has part: feature:1510758-1510829:1:exon
subclass of: SO_0000663

116150429
type: Gene
SIO_000068: ncbigene

position:1510758:1
position: 1510758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1510829:1
position: 1510829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1510758-1510829:1:exon

TRNAS-AGA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAS-AGA
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1510790..1510792,aa:Ser,seq:aga)
SIO_010081: TRNAS-AGA
subclass of: SO_0000673
so part of: TRNAS-AGA
location: 1510758..1510829
location: region:1510758-1510829:1
so has part: feature:1510758-1510829:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1510758-1510829:1:exon

TRNAS-AGA
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAS-AGA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1512278..1512349
location: region:1512278-1512349:1
so has part: feature:1512278-1512349:1:exon
subclass of: SO_0000663

116150440
type: Gene
SIO_000068: ncbigene

position:1512278:1
position: 1512278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1512349:1
position: 1512349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1512278-1512349:1:exon

TRNAS-AGA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAS-AGA
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1512310..1512312,aa:Ser,seq:aga)
SIO_010081: TRNAS-AGA
subclass of: SO_0000673
so part of: TRNAS-AGA
location: 1512278..1512349
location: region:1512278-1512349:1
so has part: feature:1512278-1512349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1512278-1512349:1:exon

RESF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: RESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1568564..1595821)
location: region:1568564-1595821:-1
so has part: feature:1568564-1595821:-1:exon
subclass of: SO_0000010

105084504
type: Gene
SIO_000068: ncbigene

position:1568564:-1
position: 1568564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1595821:-1
position: 1595821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1568564-1595821:-1:exon

RESF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RESF1
product: retroelement silencing factor 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_031443836.1
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1568564..1569297,1573236..1578264,1582871..1582936,1586285..1586333,1594338..1594429,1595682..1595821))
location: region:1568564-1595821:-1
so has part: feature:1595682-1595821:-1:exon
so has part: feature:1594338-1594429:-1:exon
so has part: feature:1586285-1586333:-1:exon
so has part: feature:1582871-1582936:-1:exon
so has part: feature:1573236-1578264:-1:exon
so has part: feature:1568564-1569297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1595682-1595821:-1:exon

position:1595682:-1
position: 1595682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1594338-1594429:-1:exon

position:1594338:-1
position: 1594338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594429:-1
position: 1594429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1586285-1586333:-1:exon

position:1586285:-1
position: 1586285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1586333:-1
position: 1586333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1582871-1582936:-1:exon

position:1582871:-1
position: 1582871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582936:-1
position: 1582936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1573236-1578264:-1:exon

position:1573236:-1
position: 1573236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1578264:-1
position: 1578264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1568564-1569297:-1:exon

position:1569297:-1
position: 1569297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RESF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RESF1
product: retroelement silencing factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_031443833.1
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1568564..1569297,1571884..1571967,1573236..1578264,1582871..1582936,1594338..1594429,1595682..1595820))
location: region:1568564-1595820:-1
so has part: feature:1595682-1595820:-1:exon
so has part: feature:1594338-1594429:-1:exon
so has part: feature:1582871-1582936:-1:exon
so has part: feature:1573236-1578264:-1:exon
so has part: feature:1571884-1571967:-1:exon
so has part: feature:1568564-1569297:-1:exon

position:1595820:-1
position: 1595820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1595682-1595820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1594338-1594429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1582871-1582936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1573236-1578264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1571884-1571967:-1:exon

position:1571884:-1
position: 1571884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571967:-1
position: 1571967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1568564-1569297:-1:exon

RESF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RESF1
product: retroelement silencing factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031443834.1
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1568564..1569297,1571884..1571967,1573236..1578264,1582871..1582933,1586285..1586333,1594338..1594429,1595682..1595820))
location: region:1568564-1595820:-1
so has part: feature:1595682-1595820:-1:exon
so has part: feature:1594338-1594429:-1:exon
so has part: feature:1586285-1586333:-1:exon
so has part: feature:1582871-1582933:-1:exon
so has part: feature:1573236-1578264:-1:exon
so has part: feature:1571884-1571967:-1:exon
so has part: feature:1568564-1569297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1595682-1595820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1594338-1594429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1586285-1586333:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1582871-1582933:-1:exon

position:1582933:-1
position: 1582933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1573236-1578264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1571884-1571967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1568564-1569297:-1:exon

RESF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RESF1
product: retroelement silencing factor 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_031443835.1
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1568564..1569297,1571884..1571961,1573236..1578264,1582871..1582936,1586285..1586333,1594338..1594429,1595682..1595820))
location: region:1568564-1595820:-1
so has part: feature:1595682-1595820:-1:exon
so has part: feature:1594338-1594429:-1:exon
so has part: feature:1586285-1586333:-1:exon
so has part: feature:1582871-1582936:-1:exon
so has part: feature:1573236-1578264:-1:exon
so has part: feature:1571884-1571961:-1:exon
so has part: feature:1568564-1569297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1595682-1595820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1594338-1594429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1586285-1586333:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1582871-1582936:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1573236-1578264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1571884-1571961:-1:exon

position:1571961:-1
position: 1571961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1568564-1569297:-1:exon

RESF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RESF1
product: retroelement silencing factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_031443831.1
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1568564..1569297,1571884..1571967,1573236..1578264,1582871..1582936,1586285..1586333,1594338..1594429,1595682..1595820))
location: region:1568564-1595820:-1
so has part: feature:1595682-1595820:-1:exon
so has part: feature:1594338-1594429:-1:exon
so has part: feature:1586285-1586333:-1:exon
so has part: feature:1582871-1582936:-1:exon
so has part: feature:1573236-1578264:-1:exon
so has part: feature:1571884-1571967:-1:exon
so has part: feature:1568564-1569297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1595682-1595820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1594338-1594429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1586285-1586333:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1582871-1582936:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1573236-1578264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1571884-1571967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1568564-1569297:-1:exon

RESF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RESF1
product: retroelement silencing factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_031443832.1
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1568564..1569297,1571884..1571967,1573236..1578264,1582871..1582936,1586285..1594429,1595682..1595820))
location: region:1568564-1595820:-1
so has part: feature:1595682-1595820:-1:exon
so has part: feature:1586285-1594429:-1:exon
so has part: feature:1582871-1582936:-1:exon
so has part: feature:1573236-1578264:-1:exon
so has part: feature:1571884-1571967:-1:exon
so has part: feature:1568564-1569297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1595682-1595820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1586285-1594429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1582871-1582936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1573236-1578264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1571884-1571967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1568564-1569297:-1:exon

RESF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retroelement silencing factor 1 isoform X3
translation: MNWNAKPESVALPPQYPKKQASFLEQALVNTLSMTSQSSLNHPGSNQEGCPFLSNSNPVSQPLLNIRNYKSQQMPISDMHGGTIVTSQTSVERIIHANVKGPKQRSHDLHMPSGVTQDVWLNSPMRNSMLSHTGATVSHQTGFGTNMPNVHALQNQFITSDTYSMQIHMIPSNSGRVPVTYQGNPRLNPPLPEQQVDWSQQCASSGLPYPDYRPLPKQYSYSPRSFLQDPPFQEQNPMSSVSLQVKKSHPPNPALTLQSKQTATVPSYQYAVTQTDKRPPPPPYDCRYASRPLQRTQHVVKVPSMEVPHSQDVHLPEMRKEFFKGFQQQWQNVNESFSMMGNPCNLRGNSNVSQPFDEPVRSSVDGVQALAQSNQEERMDSRNLTSNQVLDTSATKEKLVRDIKTLVEIKKKFSDLARKIKINKNLLMAAGCIKTTNTPYGESAQNSELSLKQTVKIQPGPQVTLVTPQTAENKPPTVMGSAEETNRIHSTLNSTLQDRNFNQVSSVLLNSACSEKLPIPEGLHDLKVVSSLKTSAVEITQATLNNTQFSSGNFVNVAQNGPTNSETASLPQSTSFEEYASKYPNKNRLILSLLAPGDKTLKTLLKDTNETIQDSKLHSFEINPNAQNTGDQLNLKTMETPSTCNINAKISDSSSCFQLKSLNELSSKSDQHFSTELLATCLSLWKKQPSELTEGKPCNESKANRTAVGLSKPVETCEKSPLPAVGNCQNKIVNSSQETILSMVAQNYESSGATTTKGIAVVSPLILSDVKTLSVRGATPEVLPEAVYPVIEEGSVCSLQNKLVEDTASKITVNEPVTSTTSSKVFPLIQKEKHEPMNANSEGTPHASQGKQNRSEPATQYPVRDQQASCISKDSDAVSSDVLQIGDICSLVEGDTSYNSQIAKIFNLSPLNKVEPQKPSLPNPQGTNSSQQNEQLDNITENKDFGFQDIVPCTDVSRKITDQSQSLQPSESSSLKYVEAKSGILEESSLEHVTKNEGMADDTCSSAAVQQDSCPQEGDVSSTYTDQDPTRNEILSDKTPILYLHDQLSELLKEFPYGIEPVNLHEGSVVQQTTDQISKAQACDKTGCNSKDSTDQIQITILNLEQMKELFPEQDDQLTEPQEEKPVPKDRKQCDPQARTVEESCESVAVDSEKDDVRCCALGWLSMVYEGVPQCQCSSSENSASKEEGKRPCSPLETSSYKQGQRTDRCDPVAFNKPPSNNPETPVNLPVEKKHVPETEQGKNVEDKSKAKPNSSLRTEQELSGPLLSKADKKLDSSLQSHKRKKRLQFHEITFHSTSKITKFSQEGLQRKLMAQSLRPLKPKMGFLTSKNKDLHMKNGSLVPSVSPEKRKLKAGGSKQKVLEKRKLDEGSILDSEMKRKKNDKPERGKHVGGGSFKFRSLFSTPSERARIKEKTAPNVTSPGSKDSSSKIHRVLAPKEYLSRQTLIEAGPSGKALKKSYAKSATCDSQHVRPGKLSVRVGSCEKSNSSLQTAKESFNICTSRGKTLKIHHSKESKTYISRNSKGTVGGKQADKMWIDKTKLDKNLNNANSDVEFSQMSSQAKDQRKLYLNRVAFKCTERERICLTKLDNSPRKLNKEKRPEGKPKSLVPVKDAAEKLSMLEFKLCPEGLFSKNTNPVEDQKDLQPCPRKEQAPVQDDNVLAHSRLAKGSFSADGFETLQNPVKDSKAMFQTYKKMYMEKRSRSLGSSPLE
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1569131..1569297,1573236..1578207))
location: region:1569131-1578207:-1
so has part: feature:1573236-1578207:-1:exon
so has part: feature:1569131-1569297:-1:exon

XP_031299696.1
type: Protein
SIO_000068: ncbiprotein

position:1569131:-1
position: 1569131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1578207:-1
position: 1578207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1573236-1578207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1569131-1569297:-1:exon

RESF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retroelement silencing factor 1 isoform X2
translation: MNWNAKPESVALPPQYPKKQASFLEQALVNTLSMTSQSSLNHPGSNQEGCPFLSNSNPVSQPLLNIRNYKSQQMPISDMHGGTIVTSQTSVERIIHANVKGPKQRSHDLHMPSGVTQDVWLNSPMRNSMLSHTGATVSHQTGFGTNMPNVHALQNQFITSDTYSMQIHMIPSNSGRVPVTYQGNPRLNPPLPEQQVDWSQQCASSGLPYPDYRPLPKQYSYSPRSFLQDPPFQEQNPMSSVSLQVKKSHPPNPALTLQSKQTATVPSYQYAVTQTDKRPPPPPYDCRYASRPLQRTQHVVKVPSMEVPHSQDVHLPEMRKEFFKGFQQQWQNVNESFSMMGNPCNLRGNSNVSQPFDEPVRSSVDGVQALAQSNQEERMDSRNLTSNQVLDTSATKEKLVRDIKTLVEIKKKFSDLARKIKINKNLLMAAGCIKTTNTPYGESAQNSELSLKQTVKIQPGPQVTLVTPQTAENKPPTVMGSAEETNRIHSTLNSTLQDRNFNQVSSVLLNSACSEKLPIPEGLHDLKVVSSLKTSAVEITQATLNNTQFSSGNFVNVAQNGPTNSETASLPQSTSFEEYASKYPNKNRLILSLLAPGDKTLKTLLKDTNETIQDSKLHSFEINPNAQNTGDQLNLKTMETPSTCNINAKISDSSSCFQLKSLNELSSKSDQHFSTELLATCLSLWKKQPSELTEGKPCNESKANRTAVGLSKPVETCEKSPLPAVGNCQNKIVNSSQETILSMVAQNYESSGATTTKGIAVVSPLILSDVKTLSVRGATPEVLPEAVYPVIEEGSVCSLQNKLVEDTASKITVNEPVTSTTSSKVFPLIQKEKHEPMNANSEGTPHASQGKQNRSEPATQYPVRDQQASCISKDSDAVSSDVLQIGDICSLVEGDTSYNSQIAKIFNLSPLNKVEPQKPSLPNPQGTNSSQQNEQLDNITENKDFGFQDIVPCTDVSRKITDQSQSLQPSESSSLKYVEAKSGILEESSLEHVTKNEGMADDTCSSAAVQQDSCPQEGDVSSTYTDQDPTRNEILSDKTPILYLHDQLSELLKEFPYGIEPVNLHEGSVVQQTTDQISKAQACDKTGCNSKDSTDQIQITILNLEQMKELFPEQDDQLTEPQEEKPVPKDRKQCDPQARTVEESCESVAVDSEKDDVRCCALGWLSMVYEGVPQCQCSSSENSASKEEGKRPCSPLETSSYKQGQRTDRCDPVAFNKPPSNNPETPVNLPVEKKHVPETEQGKNVEDKSKAKPNSSLRTEQELSGPLLSKADKKLDSSLQSHKRKKRLQFHEITFHSTSKITKFSQEGLQRKLMAQSLRPLKPKMGFLTSKNKDLHMKNGSLVPSVSPEKRKLKAGGSKQKVLEKRKLDEGSILDSEMKRKKNDKPERGKHVGGGSFKFRSLFSTPSERARIKEKTAPNVTSPGSKDSSSKIHRVLAPKEYLSRQTLIEAGPSGKALKKSYAKSATCDSQHVRPGKLSVRVGSCEKSNSSLQTAKESFNICTSRGKTLKIHHSKESKTYISRNSKGTVGGKQADKMWIDKTKLDKNLNNANSDVEFSQMSSQAKDQRKLYLNRVAFKCTERERICLTKLDNSPRKLNKEKRPEGKPKSLVPVKDAAEKLSMLEFKLCPEGLFSKNTNPVEDQKDLQPCPRKEQAPVQGIKSTKEDWLKCVTEEKRMPEANQEIDDNVLAHSRLAKGSFSADGFETLQNPVKDSKAMFQTYKKMYMEKRSRSLGSSPLE
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1569131..1569297,1571884..1571961,1573236..1578207))
location: region:1569131-1578207:-1
so has part: feature:1573236-1578207:-1:exon
so has part: feature:1571884-1571961:-1:exon
so has part: feature:1569131-1569297:-1:exon

XP_031299695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1573236-1578207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1571884-1571961:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1569131-1569297:-1:exon

RESF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retroelement silencing factor 1 isoform X1
translation: MNWNAKPESVALPPQYPKKQASFLEQALVNTLSMTSQSSLNHPGSNQEGCPFLSNSNPVSQPLLNIRNYKSQQMPISDMHGGTIVTSQTSVERIIHANVKGPKQRSHDLHMPSGVTQDVWLNSPMRNSMLSHTGATVSHQTGFGTNMPNVHALQNQFITSDTYSMQIHMIPSNSGRVPVTYQGNPRLNPPLPEQQVDWSQQCASSGLPYPDYRPLPKQYSYSPRSFLQDPPFQEQNPMSSVSLQVKKSHPPNPALTLQSKQTATVPSYQYAVTQTDKRPPPPPYDCRYASRPLQRTQHVVKVPSMEVPHSQDVHLPEMRKEFFKGFQQQWQNVNESFSMMGNPCNLRGNSNVSQPFDEPVRSSVDGVQALAQSNQEERMDSRNLTSNQVLDTSATKEKLVRDIKTLVEIKKKFSDLARKIKINKNLLMAAGCIKTTNTPYGESAQNSELSLKQTVKIQPGPQVTLVTPQTAENKPPTVMGSAEETNRIHSTLNSTLQDRNFNQVSSVLLNSACSEKLPIPEGLHDLKVVSSLKTSAVEITQATLNNTQFSSGNFVNVAQNGPTNSETASLPQSTSFEEYASKYPNKNRLILSLLAPGDKTLKTLLKDTNETIQDSKLHSFEINPNAQNTGDQLNLKTMETPSTCNINAKISDSSSCFQLKSLNELSSKSDQHFSTELLATCLSLWKKQPSELTEGKPCNESKANRTAVGLSKPVETCEKSPLPAVGNCQNKIVNSSQETILSMVAQNYESSGATTTKGIAVVSPLILSDVKTLSVRGATPEVLPEAVYPVIEEGSVCSLQNKLVEDTASKITVNEPVTSTTSSKVFPLIQKEKHEPMNANSEGTPHASQGKQNRSEPATQYPVRDQQASCISKDSDAVSSDVLQIGDICSLVEGDTSYNSQIAKIFNLSPLNKVEPQKPSLPNPQGTNSSQQNEQLDNITENKDFGFQDIVPCTDVSRKITDQSQSLQPSESSSLKYVEAKSGILEESSLEHVTKNEGMADDTCSSAAVQQDSCPQEGDVSSTYTDQDPTRNEILSDKTPILYLHDQLSELLKEFPYGIEPVNLHEGSVVQQTTDQISKAQACDKTGCNSKDSTDQIQITILNLEQMKELFPEQDDQLTEPQEEKPVPKDRKQCDPQARTVEESCESVAVDSEKDDVRCCALGWLSMVYEGVPQCQCSSSENSASKEEGKRPCSPLETSSYKQGQRTDRCDPVAFNKPPSNNPETPVNLPVEKKHVPETEQGKNVEDKSKAKPNSSLRTEQELSGPLLSKADKKLDSSLQSHKRKKRLQFHEITFHSTSKITKFSQEGLQRKLMAQSLRPLKPKMGFLTSKNKDLHMKNGSLVPSVSPEKRKLKAGGSKQKVLEKRKLDEGSILDSEMKRKKNDKPERGKHVGGGSFKFRSLFSTPSERARIKEKTAPNVTSPGSKDSSSKIHRVLAPKEYLSRQTLIEAGPSGKALKKSYAKSATCDSQHVRPGKLSVRVGSCEKSNSSLQTAKESFNICTSRGKTLKIHHSKESKTYISRNSKGTVGGKQADKMWIDKTKLDKNLNNANSDVEFSQMSSQAKDQRKLYLNRVAFKCTERERICLTKLDNSPRKLNKEKRPEGKPKSLVPVKDAAEKLSMLEFKLCPEGLFSKNTNPVEDQKDLQPCPRKEQAPVQVSGIKSTKEDWLKCVTEEKRMPEANQEIDDNVLAHSRLAKGSFSADGFETLQNPVKDSKAMFQTYKKMYMEKRSRSLGSSPLE
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1569131..1569297,1571884..1571967,1573236..1578207))
location: region:1569131-1578207:-1
so has part: feature:1573236-1578207:-1:exon
so has part: feature:1571884-1571967:-1:exon
so has part: feature:1569131-1569297:-1:exon

XP_031299691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1573236-1578207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1571884-1571967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1569131-1569297:-1:exon

RESF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retroelement silencing factor 1 isoform X1
translation: MNWNAKPESVALPPQYPKKQASFLEQALVNTLSMTSQSSLNHPGSNQEGCPFLSNSNPVSQPLLNIRNYKSQQMPISDMHGGTIVTSQTSVERIIHANVKGPKQRSHDLHMPSGVTQDVWLNSPMRNSMLSHTGATVSHQTGFGTNMPNVHALQNQFITSDTYSMQIHMIPSNSGRVPVTYQGNPRLNPPLPEQQVDWSQQCASSGLPYPDYRPLPKQYSYSPRSFLQDPPFQEQNPMSSVSLQVKKSHPPNPALTLQSKQTATVPSYQYAVTQTDKRPPPPPYDCRYASRPLQRTQHVVKVPSMEVPHSQDVHLPEMRKEFFKGFQQQWQNVNESFSMMGNPCNLRGNSNVSQPFDEPVRSSVDGVQALAQSNQEERMDSRNLTSNQVLDTSATKEKLVRDIKTLVEIKKKFSDLARKIKINKNLLMAAGCIKTTNTPYGESAQNSELSLKQTVKIQPGPQVTLVTPQTAENKPPTVMGSAEETNRIHSTLNSTLQDRNFNQVSSVLLNSACSEKLPIPEGLHDLKVVSSLKTSAVEITQATLNNTQFSSGNFVNVAQNGPTNSETASLPQSTSFEEYASKYPNKNRLILSLLAPGDKTLKTLLKDTNETIQDSKLHSFEINPNAQNTGDQLNLKTMETPSTCNINAKISDSSSCFQLKSLNELSSKSDQHFSTELLATCLSLWKKQPSELTEGKPCNESKANRTAVGLSKPVETCEKSPLPAVGNCQNKIVNSSQETILSMVAQNYESSGATTTKGIAVVSPLILSDVKTLSVRGATPEVLPEAVYPVIEEGSVCSLQNKLVEDTASKITVNEPVTSTTSSKVFPLIQKEKHEPMNANSEGTPHASQGKQNRSEPATQYPVRDQQASCISKDSDAVSSDVLQIGDICSLVEGDTSYNSQIAKIFNLSPLNKVEPQKPSLPNPQGTNSSQQNEQLDNITENKDFGFQDIVPCTDVSRKITDQSQSLQPSESSSLKYVEAKSGILEESSLEHVTKNEGMADDTCSSAAVQQDSCPQEGDVSSTYTDQDPTRNEILSDKTPILYLHDQLSELLKEFPYGIEPVNLHEGSVVQQTTDQISKAQACDKTGCNSKDSTDQIQITILNLEQMKELFPEQDDQLTEPQEEKPVPKDRKQCDPQARTVEESCESVAVDSEKDDVRCCALGWLSMVYEGVPQCQCSSSENSASKEEGKRPCSPLETSSYKQGQRTDRCDPVAFNKPPSNNPETPVNLPVEKKHVPETEQGKNVEDKSKAKPNSSLRTEQELSGPLLSKADKKLDSSLQSHKRKKRLQFHEITFHSTSKITKFSQEGLQRKLMAQSLRPLKPKMGFLTSKNKDLHMKNGSLVPSVSPEKRKLKAGGSKQKVLEKRKLDEGSILDSEMKRKKNDKPERGKHVGGGSFKFRSLFSTPSERARIKEKTAPNVTSPGSKDSSSKIHRVLAPKEYLSRQTLIEAGPSGKALKKSYAKSATCDSQHVRPGKLSVRVGSCEKSNSSLQTAKESFNICTSRGKTLKIHHSKESKTYISRNSKGTVGGKQADKMWIDKTKLDKNLNNANSDVEFSQMSSQAKDQRKLYLNRVAFKCTERERICLTKLDNSPRKLNKEKRPEGKPKSLVPVKDAAEKLSMLEFKLCPEGLFSKNTNPVEDQKDLQPCPRKEQAPVQVSGIKSTKEDWLKCVTEEKRMPEANQEIDDNVLAHSRLAKGSFSADGFETLQNPVKDSKAMFQTYKKMYMEKRSRSLGSSPLE
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1569131..1569297,1571884..1571967,1573236..1578207))
location: region:1569131-1578207:-1
so has part: feature:1573236-1578207:-1:exon
so has part: feature:1571884-1571967:-1:exon
so has part: feature:1569131-1569297:-1:exon

XP_031299692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1573236-1578207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1571884-1571967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1569131-1569297:-1:exon

RESF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retroelement silencing factor 1 isoform X1
translation: MNWNAKPESVALPPQYPKKQASFLEQALVNTLSMTSQSSLNHPGSNQEGCPFLSNSNPVSQPLLNIRNYKSQQMPISDMHGGTIVTSQTSVERIIHANVKGPKQRSHDLHMPSGVTQDVWLNSPMRNSMLSHTGATVSHQTGFGTNMPNVHALQNQFITSDTYSMQIHMIPSNSGRVPVTYQGNPRLNPPLPEQQVDWSQQCASSGLPYPDYRPLPKQYSYSPRSFLQDPPFQEQNPMSSVSLQVKKSHPPNPALTLQSKQTATVPSYQYAVTQTDKRPPPPPYDCRYASRPLQRTQHVVKVPSMEVPHSQDVHLPEMRKEFFKGFQQQWQNVNESFSMMGNPCNLRGNSNVSQPFDEPVRSSVDGVQALAQSNQEERMDSRNLTSNQVLDTSATKEKLVRDIKTLVEIKKKFSDLARKIKINKNLLMAAGCIKTTNTPYGESAQNSELSLKQTVKIQPGPQVTLVTPQTAENKPPTVMGSAEETNRIHSTLNSTLQDRNFNQVSSVLLNSACSEKLPIPEGLHDLKVVSSLKTSAVEITQATLNNTQFSSGNFVNVAQNGPTNSETASLPQSTSFEEYASKYPNKNRLILSLLAPGDKTLKTLLKDTNETIQDSKLHSFEINPNAQNTGDQLNLKTMETPSTCNINAKISDSSSCFQLKSLNELSSKSDQHFSTELLATCLSLWKKQPSELTEGKPCNESKANRTAVGLSKPVETCEKSPLPAVGNCQNKIVNSSQETILSMVAQNYESSGATTTKGIAVVSPLILSDVKTLSVRGATPEVLPEAVYPVIEEGSVCSLQNKLVEDTASKITVNEPVTSTTSSKVFPLIQKEKHEPMNANSEGTPHASQGKQNRSEPATQYPVRDQQASCISKDSDAVSSDVLQIGDICSLVEGDTSYNSQIAKIFNLSPLNKVEPQKPSLPNPQGTNSSQQNEQLDNITENKDFGFQDIVPCTDVSRKITDQSQSLQPSESSSLKYVEAKSGILEESSLEHVTKNEGMADDTCSSAAVQQDSCPQEGDVSSTYTDQDPTRNEILSDKTPILYLHDQLSELLKEFPYGIEPVNLHEGSVVQQTTDQISKAQACDKTGCNSKDSTDQIQITILNLEQMKELFPEQDDQLTEPQEEKPVPKDRKQCDPQARTVEESCESVAVDSEKDDVRCCALGWLSMVYEGVPQCQCSSSENSASKEEGKRPCSPLETSSYKQGQRTDRCDPVAFNKPPSNNPETPVNLPVEKKHVPETEQGKNVEDKSKAKPNSSLRTEQELSGPLLSKADKKLDSSLQSHKRKKRLQFHEITFHSTSKITKFSQEGLQRKLMAQSLRPLKPKMGFLTSKNKDLHMKNGSLVPSVSPEKRKLKAGGSKQKVLEKRKLDEGSILDSEMKRKKNDKPERGKHVGGGSFKFRSLFSTPSERARIKEKTAPNVTSPGSKDSSSKIHRVLAPKEYLSRQTLIEAGPSGKALKKSYAKSATCDSQHVRPGKLSVRVGSCEKSNSSLQTAKESFNICTSRGKTLKIHHSKESKTYISRNSKGTVGGKQADKMWIDKTKLDKNLNNANSDVEFSQMSSQAKDQRKLYLNRVAFKCTERERICLTKLDNSPRKLNKEKRPEGKPKSLVPVKDAAEKLSMLEFKLCPEGLFSKNTNPVEDQKDLQPCPRKEQAPVQVSGIKSTKEDWLKCVTEEKRMPEANQEIDDNVLAHSRLAKGSFSADGFETLQNPVKDSKAMFQTYKKMYMEKRSRSLGSSPLE
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1569131..1569297,1571884..1571967,1573236..1578207))
location: region:1569131-1578207:-1
so has part: feature:1573236-1578207:-1:exon
so has part: feature:1571884-1571967:-1:exon
so has part: feature:1569131-1569297:-1:exon

XP_031299693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1573236-1578207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1571884-1571967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1569131-1569297:-1:exon

RESF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RESF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retroelement silencing factor 1 isoform X1
translation: MNWNAKPESVALPPQYPKKQASFLEQALVNTLSMTSQSSLNHPGSNQEGCPFLSNSNPVSQPLLNIRNYKSQQMPISDMHGGTIVTSQTSVERIIHANVKGPKQRSHDLHMPSGVTQDVWLNSPMRNSMLSHTGATVSHQTGFGTNMPNVHALQNQFITSDTYSMQIHMIPSNSGRVPVTYQGNPRLNPPLPEQQVDWSQQCASSGLPYPDYRPLPKQYSYSPRSFLQDPPFQEQNPMSSVSLQVKKSHPPNPALTLQSKQTATVPSYQYAVTQTDKRPPPPPYDCRYASRPLQRTQHVVKVPSMEVPHSQDVHLPEMRKEFFKGFQQQWQNVNESFSMMGNPCNLRGNSNVSQPFDEPVRSSVDGVQALAQSNQEERMDSRNLTSNQVLDTSATKEKLVRDIKTLVEIKKKFSDLARKIKINKNLLMAAGCIKTTNTPYGESAQNSELSLKQTVKIQPGPQVTLVTPQTAENKPPTVMGSAEETNRIHSTLNSTLQDRNFNQVSSVLLNSACSEKLPIPEGLHDLKVVSSLKTSAVEITQATLNNTQFSSGNFVNVAQNGPTNSETASLPQSTSFEEYASKYPNKNRLILSLLAPGDKTLKTLLKDTNETIQDSKLHSFEINPNAQNTGDQLNLKTMETPSTCNINAKISDSSSCFQLKSLNELSSKSDQHFSTELLATCLSLWKKQPSELTEGKPCNESKANRTAVGLSKPVETCEKSPLPAVGNCQNKIVNSSQETILSMVAQNYESSGATTTKGIAVVSPLILSDVKTLSVRGATPEVLPEAVYPVIEEGSVCSLQNKLVEDTASKITVNEPVTSTTSSKVFPLIQKEKHEPMNANSEGTPHASQGKQNRSEPATQYPVRDQQASCISKDSDAVSSDVLQIGDICSLVEGDTSYNSQIAKIFNLSPLNKVEPQKPSLPNPQGTNSSQQNEQLDNITENKDFGFQDIVPCTDVSRKITDQSQSLQPSESSSLKYVEAKSGILEESSLEHVTKNEGMADDTCSSAAVQQDSCPQEGDVSSTYTDQDPTRNEILSDKTPILYLHDQLSELLKEFPYGIEPVNLHEGSVVQQTTDQISKAQACDKTGCNSKDSTDQIQITILNLEQMKELFPEQDDQLTEPQEEKPVPKDRKQCDPQARTVEESCESVAVDSEKDDVRCCALGWLSMVYEGVPQCQCSSSENSASKEEGKRPCSPLETSSYKQGQRTDRCDPVAFNKPPSNNPETPVNLPVEKKHVPETEQGKNVEDKSKAKPNSSLRTEQELSGPLLSKADKKLDSSLQSHKRKKRLQFHEITFHSTSKITKFSQEGLQRKLMAQSLRPLKPKMGFLTSKNKDLHMKNGSLVPSVSPEKRKLKAGGSKQKVLEKRKLDEGSILDSEMKRKKNDKPERGKHVGGGSFKFRSLFSTPSERARIKEKTAPNVTSPGSKDSSSKIHRVLAPKEYLSRQTLIEAGPSGKALKKSYAKSATCDSQHVRPGKLSVRVGSCEKSNSSLQTAKESFNICTSRGKTLKIHHSKESKTYISRNSKGTVGGKQADKMWIDKTKLDKNLNNANSDVEFSQMSSQAKDQRKLYLNRVAFKCTERERICLTKLDNSPRKLNKEKRPEGKPKSLVPVKDAAEKLSMLEFKLCPEGLFSKNTNPVEDQKDLQPCPRKEQAPVQVSGIKSTKEDWLKCVTEEKRMPEANQEIDDNVLAHSRLAKGSFSADGFETLQNPVKDSKAMFQTYKKMYMEKRSRSLGSSPLE
SIO_010081: RESF1
subclass of: SO_0000673
so part of: RESF1
location: complement(join(1569131..1569297,1571884..1571967,1573236..1578207))
location: region:1569131-1578207:-1
so has part: feature:1573236-1578207:-1:exon
so has part: feature:1571884-1571967:-1:exon
so has part: feature:1569131-1569297:-1:exon

XP_031299694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1573236-1578207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1571884-1571967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1569131-1569297:-1:exon

RESF1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: RESF1
product: retroelement silencing factor 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004134008.1
SIO_010081: RESF1
so part of: RESF1
location: complement(join(1569233..1569297,1571884..1572021,1573236..1578264,1582871..1582936,1586285..1586333,1594338..1594429,1595682..1595821))
location: region:1569233-1595821:-1
so has part: feature:1595682-1595821:-1:exon
so has part: feature:1594338-1594429:-1:exon
so has part: feature:1586285-1586333:-1:exon
so has part: feature:1582871-1582936:-1:exon
so has part: feature:1573236-1578264:-1:exon
so has part: feature:1571884-1572021:-1:exon
so has part: feature:1569233-1569297:-1:exon

position:1569233:-1
position: 1569233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1595682-1595821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1594338-1594429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1586285-1586333:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1582871-1582936:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1573236-1578264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1571884-1572021:-1:exon

position:1572021:-1
position: 1572021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1569233-1569297:-1:exon

TRNAT-GGU
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAT-GGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1652077..1652148
location: region:1652077-1652148:1
so has part: feature:1652077-1652148:1:exon
subclass of: SO_0000663

116150442
type: Gene
SIO_000068: ncbigene

position:1652077:1
position: 1652077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1652148:1
position: 1652148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1652077-1652148:1:exon

TRNAT-GGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAT-GGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon GGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1652109..1652111,aa:Thr,seq:ggt)
SIO_010081: TRNAT-GGU
subclass of: SO_0000673
so part of: TRNAT-GGU
location: 1652077..1652148
location: region:1652077-1652148:1
so has part: feature:1652077-1652148:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1652077-1652148:1:exon

LOC116150321
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150321
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1772861..1776305)
location: region:1772861-1776305:-1
so has part: feature:1772861-1776305:-1:exon
subclass of: SO_0000011

116150321
type: Gene
SIO_000068: ncbigene

position:1772861:-1
position: 1772861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1776305:-1
position: 1776305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1772861-1776305:-1:exon

LOC116150321
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150321
product: uncharacterized LOC116150321
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XR_004134009.1
SIO_010081: LOC116150321
subclass of: SO_0000673
so part of: LOC116150321
location: complement(join(1772861..1773063,1775901..1776305))
location: region:1772861-1776305:-1
so has part: feature:1775901-1776305:-1:exon
so has part: feature:1772861-1773063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1775901-1776305:-1:exon

position:1775901:-1
position: 1775901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1772861-1773063:-1:exon

position:1773063:-1
position: 1773063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AMN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: AMN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1776335..1813299
location: region:1776335-1813299:1
so has part: feature:1776335-1813299:1:exon
subclass of: SO_0000010

105104327
type: Gene
SIO_000068: ncbigene

position:1776335:1
position: 1776335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1813299:1
position: 1813299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1776335-1813299:1:exon

AMN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: AMN1
product: antagonist of mitotic exit network 1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_031443838.1
SIO_010081: AMN1
subclass of: SO_0000673
so part of: AMN1
location: join(1776335..1776487,1789352..1789484,1793299..1793443,1794918..1795135,1795454..1795510,1800548..1800659,1811986..1813299)
location: region:1776335-1813299:1
so has part: feature:1776335-1776487:1:exon
so has part: feature:1789352-1789484:1:exon
so has part: feature:1793299-1793443:1:exon
so has part: feature:1794918-1795135:1:exon
so has part: feature:1795454-1795510:1:exon
so has part: feature:1800548-1800659:1:exon
so has part: feature:1811986-1813299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1776335-1776487:1:exon

position:1776487:1
position: 1776487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1789352-1789484:1:exon

position:1789352:1
position: 1789352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1789484:1
position: 1789484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1793299-1793443:1:exon

position:1793299:1
position: 1793299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1793443:1
position: 1793443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1794918-1795135:1:exon

position:1794918:1
position: 1794918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795135:1
position: 1795135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1795454-1795510:1:exon

position:1795454:1
position: 1795454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795510:1
position: 1795510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1800548-1800659:1:exon

position:1800548:1
position: 1800548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1800659:1
position: 1800659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1811986-1813299:1:exon

position:1811986:1
position: 1811986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AMN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: AMN1
product: antagonist of mitotic exit network 1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_031443839.1
SIO_010081: AMN1
subclass of: SO_0000673
so part of: AMN1
location: join(1776361..1776469,1789352..1789484,1793299..1793443,1794918..1795135,1795454..1795510,1800548..1800659,1811986..1813299)
location: region:1776361-1813299:1
so has part: feature:1776361-1776469:1:exon
so has part: feature:1789352-1789484:1:exon
so has part: feature:1793299-1793443:1:exon
so has part: feature:1794918-1795135:1:exon
so has part: feature:1795454-1795510:1:exon
so has part: feature:1800548-1800659:1:exon
so has part: feature:1811986-1813299:1:exon

position:1776361:1
position: 1776361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1776361-1776469:1:exon

position:1776469:1
position: 1776469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1789352-1789484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1793299-1793443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1794918-1795135:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1795454-1795510:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1800548-1800659:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1811986-1813299:1:exon

AMN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: AMN1
product: antagonist of mitotic exit network 1 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_031443840.1
SIO_010081: AMN1
subclass of: SO_0000673
so part of: AMN1
location: join(1776372..1776487,1782221..1782365,1789352..1789484,1793299..1793443,1794918..1795135,1795454..1795510,1800548..1800659,1811986..1813299)
location: region:1776372-1813299:1
so has part: feature:1776372-1776487:1:exon
so has part: feature:1782221-1782365:1:exon
so has part: feature:1789352-1789484:1:exon
so has part: feature:1793299-1793443:1:exon
so has part: feature:1794918-1795135:1:exon
so has part: feature:1795454-1795510:1:exon
so has part: feature:1800548-1800659:1:exon
so has part: feature:1811986-1813299:1:exon

position:1776372:1
position: 1776372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1776372-1776487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1782221-1782365:1:exon

position:1782221:1
position: 1782221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1782365:1
position: 1782365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1789352-1789484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1793299-1793443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1794918-1795135:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1795454-1795510:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1800548-1800659:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1811986-1813299:1:exon

AMN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: AMN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AMN1 homolog isoform X1
translation: MPARSGQSLLDLCLWCFMKNISRYITDIKPLPPNIKDRLIKIMSVQGQITDSNISEILHPEVQSLDLRSCDVSDTALLHLCNCRKLKKLNLNASKGNRISVTSKGIKAVASSCSYLHEASLKRCCKVTDEGVLALALNCRLLKIIDLGGCLCITDVSLQALGENCAFLQCVDFSATQVSDNGVVALVSGPCAKKLEEIHMGHCVNLTDEAVEAVLTCCPQICILLFHGCPLITDHSREVLEQLVGPNKLKQVTWTVY
SIO_010081: AMN1
subclass of: SO_0000673
so part of: AMN1
location: join(1776453..1776487,1789352..1789484,1793299..1793443,1794918..1795135,1795454..1795510,1800548..1800659,1811986..1812059)
location: region:1776453-1812059:1
so has part: feature:1776453-1776487:1:exon
so has part: feature:1789352-1789484:1:exon
so has part: feature:1793299-1793443:1:exon
so has part: feature:1794918-1795135:1:exon
so has part: feature:1795454-1795510:1:exon
so has part: feature:1800548-1800659:1:exon
so has part: feature:1811986-1812059:1:exon

XP_031299698.1
type: Protein
SIO_000068: ncbiprotein

position:1776453:1
position: 1776453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1812059:1
position: 1812059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1776453-1776487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1789352-1789484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1793299-1793443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1794918-1795135:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1795454-1795510:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1800548-1800659:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1811986-1812059:1:exon

AMN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: AMN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AMN1 homolog isoform X2
translation: MPARSGCLWCFMKNISRYITDIKPLPPNIKDRLIKIMSVQGQITDSNISEILHPEVQSLDLRSCDVSDTALLHLCNCRKLKKLNLNASKGNRISVTSKGIKAVASSCSYLHEASLKRCCKVTDEGVLALALNCRLLKIIDLGGCLCITDVSLQALGENCAFLQCVDFSATQVSDNGVVALVSGPCAKKLEEIHMGHCVNLTDEAVEAVLTCCPQICILLFHGCPLITDHSREVLEQLVGPNKLKQVTWTVY
SIO_010081: AMN1
subclass of: SO_0000673
so part of: AMN1
location: join(1776453..1776469,1789352..1789484,1793299..1793443,1794918..1795135,1795454..1795510,1800548..1800659,1811986..1812059)
location: region:1776453-1812059:1
so has part: feature:1776453-1776469:1:exon
so has part: feature:1789352-1789484:1:exon
so has part: feature:1793299-1793443:1:exon
so has part: feature:1794918-1795135:1:exon
so has part: feature:1795454-1795510:1:exon
so has part: feature:1800548-1800659:1:exon
so has part: feature:1811986-1812059:1:exon

XP_031299699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1776453-1776469:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1789352-1789484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1793299-1793443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1794918-1795135:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1795454-1795510:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1800548-1800659:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1811986-1812059:1:exon

AMN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: AMN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AMN1 homolog isoform X3
translation: MKNISRYITDIKPLPPNIKDRLIKIMSVQGQITDSNISEILHPEVQSLDLRSCDVSDTALLHLCNCRKLKKLNLNASKGNRISVTSKGIKAVASSCSYLHEASLKRCCKVTDEGVLALALNCRLLKIIDLGGCLCITDVSLQALGENCAFLQCVDFSATQVSDNGVVALVSGPCAKKLEEIHMGHCVNLTDEAVEAVLTCCPQICILLFHGCPLITDHSREVLEQLVGPNKLKQVTWTVY
SIO_010081: AMN1
subclass of: SO_0000673
so part of: AMN1
location: join(1789368..1789484,1793299..1793443,1794918..1795135,1795454..1795510,1800548..1800659,1811986..1812059)
location: region:1789368-1812059:1
so has part: feature:1789368-1789484:1:exon
so has part: feature:1793299-1793443:1:exon
so has part: feature:1794918-1795135:1:exon
so has part: feature:1795454-1795510:1:exon
so has part: feature:1800548-1800659:1:exon
so has part: feature:1811986-1812059:1:exon

XP_031299700.1
type: Protein
SIO_000068: ncbiprotein

position:1789368:1
position: 1789368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1789368-1789484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1793299-1793443:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1794918-1795135:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1795454-1795510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1800548-1800659:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1811986-1812059:1:exon

ETFBKMT
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ETFBKMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1813458..1820862)
location: region:1813458-1820862:-1
so has part: feature:1813458-1820862:-1:exon
subclass of: SO_0000010

105104326
type: Gene
SIO_000068: ncbigene

position:1813458:-1
position: 1813458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1820862:-1
position: 1820862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1813458-1820862:-1:exon

ETFBKMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ETFBKMT
product: electron transfer flavoprotein subunit beta lysine methyltransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_031443837.1
SIO_010081: ETFBKMT
subclass of: SO_0000673
so part of: ETFBKMT
location: complement(join(1813458..1815896,1816636..1816766,1818752..1819191,1819595..1819644,1820689..1820862))
location: region:1813458-1820862:-1
so has part: feature:1820689-1820862:-1:exon
so has part: feature:1819595-1819644:-1:exon
so has part: feature:1818752-1819191:-1:exon
so has part: feature:1816636-1816766:-1:exon
so has part: feature:1813458-1815896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1820689-1820862:-1:exon

position:1820689:-1
position: 1820689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1819595-1819644:-1:exon

position:1819595:-1
position: 1819595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1819644:-1
position: 1819644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1818752-1819191:-1:exon

position:1818752:-1
position: 1818752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1819191:-1
position: 1819191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1816636-1816766:-1:exon

position:1816636:-1
position: 1816636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1816766:-1
position: 1816766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1813458-1815896:-1:exon

position:1815896:-1
position: 1815896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETFBKMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ETFBKMT
product: electron transfer flavoprotein subunit beta lysine methyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_010998002.2
SIO_010081: ETFBKMT
subclass of: SO_0000673
so part of: ETFBKMT
location: complement(join(1813458..1815896,1816636..1816766,1818752..1819191,1820689..1820861))
location: region:1813458-1820861:-1
so has part: feature:1820689-1820861:-1:exon
so has part: feature:1818752-1819191:-1:exon
so has part: feature:1816636-1816766:-1:exon
so has part: feature:1813458-1815896:-1:exon

position:1820861:-1
position: 1820861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1820689-1820861:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1818752-1819191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1816636-1816766:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1813458-1815896:-1:exon

ETFBKMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ETFBKMT
product: electron transfer flavoprotein subunit beta lysine methyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_010998003.2
SIO_010081: ETFBKMT
subclass of: SO_0000673
so part of: ETFBKMT
location: complement(join(1813458..1815896,1816636..1816766,1818752..1819191,1819926..1820681))
location: region:1813458-1820681:-1
so has part: feature:1819926-1820681:-1:exon
so has part: feature:1818752-1819191:-1:exon
so has part: feature:1816636-1816766:-1:exon
so has part: feature:1813458-1815896:-1:exon

position:1820681:-1
position: 1820681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1819926-1820681:-1:exon

position:1819926:-1
position: 1819926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1818752-1819191:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1816636-1816766:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1813458-1815896:-1:exon

ETFBKMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ETFBKMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein beta subunit lysine methyltransferase
translation: MALSPGWRAFAPFPVNCRGALQKAVRSSGLPLFPWGHCPWRGTGSFLDPEMKAFLEENTEVTSSGSLTPEIQLRLLTPRCKFWWERADLWPHSDPYWAIYWPGGQALSRYLLDNPGVVRGKSVLDVGSGCGATAIAAKMSGALRILANDIDPIAGMAITLNCELNRLNPFPILTKNILDLKQGKWDLVVLGDMFYDEDLADSLHQWLKNCFRAQRTRVLIGDPRRPQFSGHGIQHQLHKVVEYPLPEPTRRENNGLTTSTVWEFQP
SIO_010081: ETFBKMT
subclass of: SO_0000673
so part of: ETFBKMT
location: complement(join(1815553..1815896,1816636..1816766,1818752..1819077))
location: region:1815553-1819077:-1
so has part: feature:1818752-1819077:-1:exon
so has part: feature:1816636-1816766:-1:exon
so has part: feature:1815553-1815896:-1:exon

XP_031299697.1
type: Protein
SIO_000068: ncbiprotein

position:1815553:-1
position: 1815553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1819077:-1
position: 1819077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1818752-1819077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1816636-1816766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1815553-1815896:-1:exon

ETFBKMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ETFBKMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein beta subunit lysine methyltransferase
translation: MALSPGWRAFAPFPVNCRGALQKAVRSSGLPLFPWGHCPWRGTGSFLDPEMKAFLEENTEVTSSGSLTPEIQLRLLTPRCKFWWERADLWPHSDPYWAIYWPGGQALSRYLLDNPGVVRGKSVLDVGSGCGATAIAAKMSGALRILANDIDPIAGMAITLNCELNRLNPFPILTKNILDLKQGKWDLVVLGDMFYDEDLADSLHQWLKNCFRAQRTRVLIGDPRRPQFSGHGIQHQLHKVVEYPLPEPTRRENNGLTTSTVWEFQP
SIO_010081: ETFBKMT
subclass of: SO_0000673
so part of: ETFBKMT
location: complement(join(1815553..1815896,1816636..1816766,1818752..1819077))
location: region:1815553-1819077:-1
so has part: feature:1818752-1819077:-1:exon
so has part: feature:1816636-1816766:-1:exon
so has part: feature:1815553-1815896:-1:exon

XP_010996304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1818752-1819077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1816636-1816766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1815553-1815896:-1:exon

ETFBKMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ETFBKMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein beta subunit lysine methyltransferase
translation: MALSPGWRAFAPFPVNCRGALQKAVRSSGLPLFPWGHCPWRGTGSFLDPEMKAFLEENTEVTSSGSLTPEIQLRLLTPRCKFWWERADLWPHSDPYWAIYWPGGQALSRYLLDNPGVVRGKSVLDVGSGCGATAIAAKMSGALRILANDIDPIAGMAITLNCELNRLNPFPILTKNILDLKQGKWDLVVLGDMFYDEDLADSLHQWLKNCFRAQRTRVLIGDPRRPQFSGHGIQHQLHKVVEYPLPEPTRRENNGLTTSTVWEFQP
SIO_010081: ETFBKMT
subclass of: SO_0000673
so part of: ETFBKMT
location: complement(join(1815553..1815896,1816636..1816766,1818752..1819077))
location: region:1815553-1819077:-1
so has part: feature:1818752-1819077:-1:exon
so has part: feature:1816636-1816766:-1:exon
so has part: feature:1815553-1815896:-1:exon

XP_010996305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1818752-1819077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1816636-1816766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1815553-1815896:-1:exon

DENND5B
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: DENND5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1866231..2023051
location: region:1866231-2023051:1
so has part: feature:1866231-2023051:1:exon
subclass of: SO_0000010

105104325
type: Gene
SIO_000068: ncbigene

position:1866231:1
position: 1866231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2023051:1
position: 2023051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1866231-2023051:1:exon

DENND5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DENND5B
product: DENN domain containing 5B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_031443841.1
SIO_010081: DENND5B
subclass of: SO_0000673
so part of: DENND5B
location: join(1866231..1866420,1921594..1921659,1924750..1924859,1933562..1934228,1954508..1954695,1959733..1960269,1962993..1963224,1967335..1967485,1976214..1976307,1980685..1980816,1982044..1982196,1983068..1983146,1988858..1988939,2002285..2002413,2004192..2004313,2007006..2007151,2008758..2008876,2009977..2010164,2014268..2014350,2014720..2014846,2016484..2016658,2018190..2023051)
location: region:1866231-2023051:1
so has part: feature:1866231-1866420:1:exon
so has part: feature:1921594-1921659:1:exon
so has part: feature:1924750-1924859:1:exon
so has part: feature:1933562-1934228:1:exon
so has part: feature:1954508-1954695:1:exon
so has part: feature:1959733-1960269:1:exon
so has part: feature:1962993-1963224:1:exon
so has part: feature:1967335-1967485:1:exon
so has part: feature:1976214-1976307:1:exon
so has part: feature:1980685-1980816:1:exon
so has part: feature:1982044-1982196:1:exon
so has part: feature:1983068-1983146:1:exon
so has part: feature:1988858-1988939:1:exon
so has part: feature:2002285-2002413:1:exon
so has part: feature:2004192-2004313:1:exon
so has part: feature:2007006-2007151:1:exon
so has part: feature:2008758-2008876:1:exon
so has part: feature:2009977-2010164:1:exon
so has part: feature:2014268-2014350:1:exon
so has part: feature:2014720-2014846:1:exon
so has part: feature:2016484-2016658:1:exon
so has part: feature:2018190-2023051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1866231-1866420:1:exon

position:1866420:1
position: 1866420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1921594-1921659:1:exon

position:1921594:1
position: 1921594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1921659:1
position: 1921659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1924750-1924859:1:exon

position:1924750:1
position: 1924750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1924859:1
position: 1924859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1933562-1934228:1:exon

position:1933562:1
position: 1933562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1934228:1
position: 1934228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1954508-1954695:1:exon

position:1954508:1
position: 1954508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1954695:1
position: 1954695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1959733-1960269:1:exon

position:1959733:1
position: 1959733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1960269:1
position: 1960269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1962993-1963224:1:exon

position:1962993:1
position: 1962993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1963224:1
position: 1963224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1967335-1967485:1:exon

position:1967335:1
position: 1967335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1967485:1
position: 1967485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1976214-1976307:1:exon

position:1976214:1
position: 1976214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1976307:1
position: 1976307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1980685-1980816:1:exon

position:1980685:1
position: 1980685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1980816:1
position: 1980816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1982044-1982196:1:exon

position:1982044:1
position: 1982044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982196:1
position: 1982196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1983068-1983146:1:exon

position:1983068:1
position: 1983068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1983146:1
position: 1983146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1988858-1988939:1:exon

position:1988858:1
position: 1988858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1988939:1
position: 1988939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2002285-2002413:1:exon

position:2002285:1
position: 2002285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2002413:1
position: 2002413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2004192-2004313:1:exon

position:2004192:1
position: 2004192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2004313:1
position: 2004313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2007006-2007151:1:exon

position:2007006:1
position: 2007006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2007151:1
position: 2007151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2008758-2008876:1:exon

position:2008758:1
position: 2008758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2008876:1
position: 2008876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2009977-2010164:1:exon

position:2009977:1
position: 2009977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2010164:1
position: 2010164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2014268-2014350:1:exon

position:2014268:1
position: 2014268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2014350:1
position: 2014350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2014720-2014846:1:exon

position:2014720:1
position: 2014720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2014846:1
position: 2014846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2016484-2016658:1:exon

position:2016484:1
position: 2016484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2016658:1
position: 2016658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2018190-2023051:1:exon

position:2018190:1
position: 2018190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DENND5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DENND5B
product: DENN domain containing 5B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_031443842.1
SIO_010081: DENND5B
subclass of: SO_0000673
so part of: DENND5B
location: join(1866231..1866420,1924750..1924859,1933562..1934228,1954508..1954695,1959733..1960269,1962993..1963224,1967335..1967485,1976214..1976307,1980685..1980816,1982044..1982196,1983068..1983146,1988858..1988939,2002285..2002413,2004192..2004313,2007006..2007151,2008758..2008876,2009977..2010164,2014268..2014350,2014720..2014846,2016484..2016658,2018190..2023051)
location: region:1866231-2023051:1
so has part: feature:1866231-1866420:1:exon
so has part: feature:1924750-1924859:1:exon
so has part: feature:1933562-1934228:1:exon
so has part: feature:1954508-1954695:1:exon
so has part: feature:1959733-1960269:1:exon
so has part: feature:1962993-1963224:1:exon
so has part: feature:1967335-1967485:1:exon
so has part: feature:1976214-1976307:1:exon
so has part: feature:1980685-1980816:1:exon
so has part: feature:1982044-1982196:1:exon
so has part: feature:1983068-1983146:1:exon
so has part: feature:1988858-1988939:1:exon
so has part: feature:2002285-2002413:1:exon
so has part: feature:2004192-2004313:1:exon
so has part: feature:2007006-2007151:1:exon
so has part: feature:2008758-2008876:1:exon
so has part: feature:2009977-2010164:1:exon
so has part: feature:2014268-2014350:1:exon
so has part: feature:2014720-2014846:1:exon
so has part: feature:2016484-2016658:1:exon
so has part: feature:2018190-2023051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1866231-1866420:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1924750-1924859:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1933562-1934228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1954508-1954695:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1959733-1960269:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1962993-1963224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1967335-1967485:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1976214-1976307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1980685-1980816:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982044-1982196:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1983068-1983146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1988858-1988939:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2002285-2002413:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2004192-2004313:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2007006-2007151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2008758-2008876:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2009977-2010164:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2014268-2014350:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2014720-2014846:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2016484-2016658:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2018190-2023051:1:exon

DENND5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DENND5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 5B isoform X1
translation: MSGSGAAPGPGRAPSRPPPAASRTTSCCAGSTRTAGWSPKLAVLYQWLEADRHGKSQDAANTTSGENFDQSPLRRTFKSKVLAHYPQNIEWNPFDQDAVNMLCMPKGLSFRTQTDNKDPQFHSFIITREDGSRTYGFVLTFYEEVTSKQICTAMQTLYQMHNAEHYSSVYASSSCSMDSLASSADEGDTTSLLKLQRYNSYDISRDTLYVSKSICLITPLPFMQACKKFLIQLYKAVTSQQPPPLPLESYIHNILYEVPLPPPGRSLKFYGVYEPIICQRPGPSELPLSDYPLREAFELLGLENLVQVFTCVLLEMQILLYSQDYQRLMTVAEGITTLLFPFQWQHVYVPILPASLLHFLDAPVPYLMGLQSKEGTDRSKLELPQEANLCFVDIDNHFIELPEEFPQFPNKVDFIQELSEVLLQFGIPPEGSLHCSESATKLKNLVLKDLVNDKKNGNVPASSISVYELLRGNETIARLQALAQRTGVAVGQVDLSASLGEKEKDVKLQCEEAELRDYQLNVQLREVFANRFTQMFADYEAFVIQTAQDMESWLTNREQMQNFDKASFLSDQPEPYLPFLSRFIETQMFATFIDNKIMSQWEEKDPLLRVFDSRIEKIRLYNVRAPTLRTSMYQKCGTLKEAAQSIEQRLMKMDHTAIHPHLLDMKIGQGKYEQGFFPKLQSDVLATGPTNNNRWVSRSATAQRRKDRLRQHSEHVGLDNELREKYMQEARSLGKSLRQPKLSDLSPAVIAQTNWKFVEGLLKECRMKTKRMLVEKMGHEAVELGHGEANITGLEENTLIASLCDLLERIWSHGLQVKQGKSALWSHLIQFQDREEKQEHLAESPVALGPERRKSDSGVMLPTLRVSLIQDMRHVQNMSEIKTDVGRARAWIRLSLEKKLLSQHLKQLLSDQLLTKKLYKRYAFLRCEEEREQFLYHLLSLNAVDYFCFTSVFTTIMIPYRAVIIPIKKLSNAIITSNPWICVSGELGDTGVMQIPKNLLEMTFECQNLGKLTTVQIGHDNSGLLAKWLVDCVMVRNEITGHTYRFPCGRWLGKGIDDGSLERILIGELMASAPDEDLVKQCRTPPQQKSPTTARRLSVTSLTGRATKPNAGQIQEGIGEAVNNIVKHFHKPEKERGSLTVLLCGESGLVAALEQVFHHGFKSARIFHKNVFIWDFIERAVAYFETTDQILDNEDDVLIQKSSWKTFCHYVNAINTAPRSIGKDGKFQTLVCLGTRDRLLPQWIPLLAECPAITRMYEESALLRDRMTVNSLIRILQTIQDFTIVLEGSLIKGVDV
SIO_010081: DENND5B
subclass of: SO_0000673
so part of: DENND5B
location: join(1866294..1866420,1921594..1921659,1924750..1924859,1933562..1934228,1954508..1954695,1959733..1960269,1962993..1963224,1967335..1967485,1976214..1976307,1980685..1980816,1982044..1982196,1983068..1983146,1988858..1988939,2002285..2002413,2004192..2004313,2007006..2007151,2008758..2008876,2009977..2010164,2014268..2014350,2014720..2014846,2016484..2016658,2018190..2018373)
location: region:1866294-2018373:1
so has part: feature:1866294-1866420:1:exon
so has part: feature:1921594-1921659:1:exon
so has part: feature:1924750-1924859:1:exon
so has part: feature:1933562-1934228:1:exon
so has part: feature:1954508-1954695:1:exon
so has part: feature:1959733-1960269:1:exon
so has part: feature:1962993-1963224:1:exon
so has part: feature:1967335-1967485:1:exon
so has part: feature:1976214-1976307:1:exon
so has part: feature:1980685-1980816:1:exon
so has part: feature:1982044-1982196:1:exon
so has part: feature:1983068-1983146:1:exon
so has part: feature:1988858-1988939:1:exon
so has part: feature:2002285-2002413:1:exon
so has part: feature:2004192-2004313:1:exon
so has part: feature:2007006-2007151:1:exon
so has part: feature:2008758-2008876:1:exon
so has part: feature:2009977-2010164:1:exon
so has part: feature:2014268-2014350:1:exon
so has part: feature:2014720-2014846:1:exon
so has part: feature:2016484-2016658:1:exon
so has part: feature:2018190-2018373:1:exon

XP_031299701.1
type: Protein
SIO_000068: ncbiprotein

position:1866294:1
position: 1866294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2018373:1
position: 2018373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1866294-1866420:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1921594-1921659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1924750-1924859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1933562-1934228:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1954508-1954695:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1959733-1960269:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1962993-1963224:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1967335-1967485:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1976214-1976307:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1980685-1980816:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1982044-1982196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1983068-1983146:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1988858-1988939:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2002285-2002413:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2004192-2004313:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2007006-2007151:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2008758-2008876:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2009977-2010164:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2014268-2014350:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2014720-2014846:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2016484-2016658:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2018190-2018373:1:exon

DENND5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DENND5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 5B isoform X2
translation: MSGSGAAPGPGRAPSRPPPAASRTTSCCAGSTRTAGWSPKLAGENFDQSPLRRTFKSKVLAHYPQNIEWNPFDQDAVNMLCMPKGLSFRTQTDNKDPQFHSFIITREDGSRTYGFVLTFYEEVTSKQICTAMQTLYQMHNAEHYSSVYASSSCSMDSLASSADEGDTTSLLKLQRYNSYDISRDTLYVSKSICLITPLPFMQACKKFLIQLYKAVTSQQPPPLPLESYIHNILYEVPLPPPGRSLKFYGVYEPIICQRPGPSELPLSDYPLREAFELLGLENLVQVFTCVLLEMQILLYSQDYQRLMTVAEGITTLLFPFQWQHVYVPILPASLLHFLDAPVPYLMGLQSKEGTDRSKLELPQEANLCFVDIDNHFIELPEEFPQFPNKVDFIQELSEVLLQFGIPPEGSLHCSESATKLKNLVLKDLVNDKKNGNVPASSISVYELLRGNETIARLQALAQRTGVAVGQVDLSASLGEKEKDVKLQCEEAELRDYQLNVQLREVFANRFTQMFADYEAFVIQTAQDMESWLTNREQMQNFDKASFLSDQPEPYLPFLSRFIETQMFATFIDNKIMSQWEEKDPLLRVFDSRIEKIRLYNVRAPTLRTSMYQKCGTLKEAAQSIEQRLMKMDHTAIHPHLLDMKIGQGKYEQGFFPKLQSDVLATGPTNNNRWVSRSATAQRRKDRLRQHSEHVGLDNELREKYMQEARSLGKSLRQPKLSDLSPAVIAQTNWKFVEGLLKECRMKTKRMLVEKMGHEAVELGHGEANITGLEENTLIASLCDLLERIWSHGLQVKQGKSALWSHLIQFQDREEKQEHLAESPVALGPERRKSDSGVMLPTLRVSLIQDMRHVQNMSEIKTDVGRARAWIRLSLEKKLLSQHLKQLLSDQLLTKKLYKRYAFLRCEEEREQFLYHLLSLNAVDYFCFTSVFTTIMIPYRAVIIPIKKLSNAIITSNPWICVSGELGDTGVMQIPKNLLEMTFECQNLGKLTTVQIGHDNSGLLAKWLVDCVMVRNEITGHTYRFPCGRWLGKGIDDGSLERILIGELMASAPDEDLVKQCRTPPQQKSPTTARRLSVTSLTGRATKPNAGQIQEGIGEAVNNIVKHFHKPEKERGSLTVLLCGESGLVAALEQVFHHGFKSARIFHKNVFIWDFIERAVAYFETTDQILDNEDDVLIQKSSWKTFCHYVNAINTAPRSIGKDGKFQTLVCLGTRDRLLPQWIPLLAECPAITRMYEESALLRDRMTVNSLIRILQTIQDFTIVLEGSLIKGVDV
SIO_010081: DENND5B
subclass of: SO_0000673
so part of: DENND5B
location: join(1866294..1866420,1924750..1924859,1933562..1934228,1954508..1954695,1959733..1960269,1962993..1963224,1967335..1967485,1976214..1976307,1980685..1980816,1982044..1982196,1983068..1983146,1988858..1988939,2002285..2002413,2004192..2004313,2007006..2007151,2008758..2008876,2009977..2010164,2014268..2014350,2014720..2014846,2016484..2016658,2018190..2018373)
location: region:1866294-2018373:1
so has part: feature:1866294-1866420:1:exon
so has part: feature:1924750-1924859:1:exon
so has part: feature:1933562-1934228:1:exon
so has part: feature:1954508-1954695:1:exon
so has part: feature:1959733-1960269:1:exon
so has part: feature:1962993-1963224:1:exon
so has part: feature:1967335-1967485:1:exon
so has part: feature:1976214-1976307:1:exon
so has part: feature:1980685-1980816:1:exon
so has part: feature:1982044-1982196:1:exon
so has part: feature:1983068-1983146:1:exon
so has part: feature:1988858-1988939:1:exon
so has part: feature:2002285-2002413:1:exon
so has part: feature:2004192-2004313:1:exon
so has part: feature:2007006-2007151:1:exon
so has part: feature:2008758-2008876:1:exon
so has part: feature:2009977-2010164:1:exon
so has part: feature:2014268-2014350:1:exon
so has part: feature:2014720-2014846:1:exon
so has part: feature:2016484-2016658:1:exon
so has part: feature:2018190-2018373:1:exon

XP_031299702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1866294-1866420:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1924750-1924859:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1933562-1934228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1954508-1954695:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1959733-1960269:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1962993-1963224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1967335-1967485:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1976214-1976307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1980685-1980816:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982044-1982196:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1983068-1983146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1988858-1988939:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2002285-2002413:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2004192-2004313:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2007006-2007151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2008758-2008876:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2009977-2010164:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2014268-2014350:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2014720-2014846:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2016484-2016658:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2018190-2018373:1:exon

LOC116150322
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150322
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1875138..1877385)
location: region:1875138-1877385:-1
so has part: feature:1875138-1877385:-1:exon
subclass of: SO_0000011

116150322
type: Gene
SIO_000068: ncbigene

position:1875138:-1
position: 1875138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1877385:-1
position: 1877385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1875138-1877385:-1:exon

LOC116150322
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150322
product: uncharacterized LOC116150322
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004134010.1
SIO_010081: LOC116150322
subclass of: SO_0000673
so part of: LOC116150322
location: complement(join(1875138..1875803,1876365..1876470,1876577..1877385))
location: region:1875138-1877385:-1
so has part: feature:1876577-1877385:-1:exon
so has part: feature:1876365-1876470:-1:exon
so has part: feature:1875138-1875803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1876577-1877385:-1:exon

position:1876577:-1
position: 1876577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1876365-1876470:-1:exon

position:1876365:-1
position: 1876365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1876470:-1
position: 1876470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1875138-1875803:-1:exon

position:1875803:-1
position: 1875803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105104328
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105104328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1997619..2000515
location: region:1997619-2000515:1
so has part: feature:1997619-2000515:1:exon

105104328
type: Gene
SIO_000068: ncbigene

position:1997619:1
position: 1997619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2000515:1
position: 2000515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1997619-2000515:1:exon

LOC105104328
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105104328
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105104328
subclass of: SO_0000673
so part of: LOC105104328
location: 1997619..2000515
location: region:1997619-2000515:1
so has part: feature:1997619-2000515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1997619-2000515:1:exon

SINHCAF
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2130604..2158062
location: region:2130604-2158062:1
so has part: feature:2130604-2158062:1:exon
subclass of: SO_0000010

105103944
type: Gene
SIO_000068: ncbigene

position:2130604:1
position: 2130604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2158062:1
position: 2158062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2130604-2158062:1:exon

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_010997613.2
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(2130604..2130778,2144075..2144222,2145762..2145861,2147590..2147716,2152719..2152869,2155943..2158062)
location: region:2130604-2158062:1
so has part: feature:2130604-2130778:1:exon
so has part: feature:2144075-2144222:1:exon
so has part: feature:2145762-2145861:1:exon
so has part: feature:2147590-2147716:1:exon
so has part: feature:2152719-2152869:1:exon
so has part: feature:2155943-2158062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2130604-2130778:1:exon

position:2130778:1
position: 2130778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2144075-2144222:1:exon

position:2144075:1
position: 2144075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2144222:1
position: 2144222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2145762-2145861:1:exon

position:2145762:1
position: 2145762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2145861:1
position: 2145861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2147590-2147716:1:exon

position:2147590:1
position: 2147590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2147716:1
position: 2147716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2152719-2152869:1:exon

position:2152719:1
position: 2152719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2152869:1
position: 2152869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2155943-2158062:1:exon

position:2155943:1
position: 2155943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031443846.1
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(2132501..2133067,2133225..2135969)
location: region:2132501-2135969:1
so has part: feature:2132501-2133067:1:exon
so has part: feature:2133225-2135969:1:exon

position:2132501:1
position: 2132501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2135969:1
position: 2135969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2132501-2133067:1:exon

position:2133067:1
position: 2133067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2133225-2135969:1:exon

position:2133225:1
position: 2133225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031443848.1
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(2132501..2133063,2133225..2135969)
location: region:2132501-2135969:1
so has part: feature:2132501-2133063:1:exon
so has part: feature:2133225-2135969:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2132501-2133063:1:exon

position:2133063:1
position: 2133063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2133225-2135969:1:exon

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_031443847.1
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(2132501..2133040,2133225..2135969)
location: region:2132501-2135969:1
so has part: feature:2132501-2133040:1:exon
so has part: feature:2133225-2135969:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2132501-2133040:1:exon

position:2133040:1
position: 2133040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2133225-2135969:1:exon

SINHCAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SIN3-HDAC complex-associated factor isoform X2
translation: MFELRQGKAMRRKQAPGRRRAGGAACGRAQGRPGGRRGRRCSGAGEGGGGGEGRAPLSPPLAGRAGSPPGTFLPPPAAAPGSSSVCPPGTSAAAAAAACTRGERRLGRPRRDGRDGEAFCCFGETDERPSPPPSRGPRARGAPAPTTPEKTPRGSFGAPVVLQREVRPWAKRACSLFFGVCTRKPRNDCLAGRGPCAR
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(2132527..2133067,2133225..2133280)
location: region:2132527-2133280:1
so has part: feature:2132527-2133067:1:exon
so has part: feature:2133225-2133280:1:exon

XP_031299706.1
type: Protein
SIO_000068: ncbiprotein

position:2132527:1
position: 2132527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2133280:1
position: 2133280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2132527-2133067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2133225-2133280:1:exon

SINHCAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SIN3-HDAC complex-associated factor isoform X3
translation: MFELRQGKAMRRKQAPGRRRAGGAACGRAQGRPGGRRGRRCSGAGEGGGGGEGRAPLSPPLAGRAGSPPGTFLPPPAAAPGSSSVCPPGTSAAAAAAACTRGERRLGRPRRDGRDGEAFCCFGETDERPSPPPSRGPRARGAPAPTTPEKTPRGSFGAPVVLQREVRPWAKRTRKPRNDCLAGRGPCAR
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(2132527..2133040,2133225..2133280)
location: region:2132527-2133280:1
so has part: feature:2132527-2133040:1:exon
so has part: feature:2133225-2133280:1:exon

XP_031299707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2132527-2133040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2133225-2133280:1:exon

SINHCAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SIN3-HDAC complex-associated factor isoform X4
translation: MFELRQGKAMRRKQAPGRRRAGGAACGRAQGRPGGRRGRRCSGAGEGGGGGEGRAPLSPPLAGRAGSPPGTFLPPPAAAPGSSSVCPPGTSAAAAAAACTRGERRLGRPRRDGRDGEAFCCFGETDERPSPPPSRGPRARGAPAPTTPEKTPRGSFGAPVVLQREVRPWAKRACSLFFGALGSPGMTV
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(2132527..2133063,2133225..2133254)
location: region:2132527-2133254:1
so has part: feature:2132527-2133063:1:exon
so has part: feature:2133225-2133254:1:exon

XP_031299708.1
type: Protein
SIO_000068: ncbiprotein

position:2133254:1
position: 2133254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2132527-2133063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2133225-2133254:1:exon

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031443844.1
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(2132606..2133067,2144075..2144222,2145762..2145861,2147590..2147716,2152719..2152869,2155943..2158062)
location: region:2132606-2158062:1
so has part: feature:2132606-2133067:1:exon
so has part: feature:2144075-2144222:1:exon
so has part: feature:2145762-2145861:1:exon
so has part: feature:2147590-2147716:1:exon
so has part: feature:2152719-2152869:1:exon
so has part: feature:2155943-2158062:1:exon

position:2132606:1
position: 2132606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2132606-2133067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2144075-2144222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2145762-2145861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2147590-2147716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2152719-2152869:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2155943-2158062:1:exon

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_031443845.1
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(2132606..2133040,2144075..2144222,2145762..2145861,2147590..2147716,2152719..2152869,2155943..2158062)
location: region:2132606-2158062:1
so has part: feature:2132606-2133040:1:exon
so has part: feature:2144075-2144222:1:exon
so has part: feature:2145762-2145861:1:exon
so has part: feature:2147590-2147716:1:exon
so has part: feature:2152719-2152869:1:exon
so has part: feature:2155943-2158062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2132606-2133040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2144075-2144222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2145762-2145861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2147590-2147716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2152719-2152869:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2155943-2158062:1:exon

SINHCAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SIN3-HDAC complex-associated factor isoform X1
translation: MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLVKRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNSDAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKGRFGEVLIDTHLFKPCCSNKKAAAEKPAGPGPEPLPISTQEW
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(2144095..2144222,2145762..2145861,2147590..2147716,2152719..2152869,2155943..2156102)
location: region:2144095-2156102:1
so has part: feature:2144095-2144222:1:exon
so has part: feature:2145762-2145861:1:exon
so has part: feature:2147590-2147716:1:exon
so has part: feature:2152719-2152869:1:exon
so has part: feature:2155943-2156102:1:exon

XP_031299704.1
type: Protein
SIO_000068: ncbiprotein

position:2144095:1
position: 2144095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2156102:1
position: 2156102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2144095-2144222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2145762-2145861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2147590-2147716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2152719-2152869:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2155943-2156102:1:exon

SINHCAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SIN3-HDAC complex-associated factor isoform X1
translation: MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLVKRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNSDAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKGRFGEVLIDTHLFKPCCSNKKAAAEKPAGPGPEPLPISTQEW
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(2144095..2144222,2145762..2145861,2147590..2147716,2152719..2152869,2155943..2156102)
location: region:2144095-2156102:1
so has part: feature:2144095-2144222:1:exon
so has part: feature:2145762-2145861:1:exon
so has part: feature:2147590-2147716:1:exon
so has part: feature:2152719-2152869:1:exon
so has part: feature:2155943-2156102:1:exon

XP_031299705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2144095-2144222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2145762-2145861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2147590-2147716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2152719-2152869:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2155943-2156102:1:exon

SINHCAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SIN3-HDAC complex-associated factor isoform X1
translation: MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLVKRWKKLPAGSKKNWNHVVDARAGPSLKTTLKPKKVKTLSGNRIKSNQISKLQKEFKRHNSDAHSTTSSASPAQSPCYSNQSDDGSDTEMASGSNRTPVFSFLDLTYWKRQKICCGIIYKGRFGEVLIDTHLFKPCCSNKKAAAEKPAGPGPEPLPISTQEW
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: join(2144095..2144222,2145762..2145861,2147590..2147716,2152719..2152869,2155943..2156102)
location: region:2144095-2156102:1
so has part: feature:2144095-2144222:1:exon
so has part: feature:2145762-2145861:1:exon
so has part: feature:2147590-2147716:1:exon
so has part: feature:2152719-2152869:1:exon
so has part: feature:2155943-2156102:1:exon

XP_010995915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2144095-2144222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2145762-2145861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2147590-2147716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2152719-2152869:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2155943-2156102:1:exon

CAPRIN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2210147..2248641
location: region:2210147-2248641:1
so has part: feature:2210147-2248641:1:exon
subclass of: SO_0000010

105103943
type: Gene
SIO_000068: ncbigene

position:2210147:1
position: 2210147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2248641:1
position: 2248641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2210147-2248641:1:exon

CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CAPRIN2
product: caprin family member 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_031443855.1
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2210147..2210355,2211473..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2238473..2238577,2239888..2240034,2242138..2242306,2243653..2243835,2244571..2244671,2246545..2246608,2247673..2247894)
location: region:2210147-2247894:1
so has part: feature:2210147-2210355:1:exon
so has part: feature:2211473-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2238473-2238577:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243653-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247673-2247894:1:exon

position:2247894:1
position: 2247894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2210147-2210355:1:exon

position:2210355:1
position: 2210355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2211473-2211738:1:exon

position:2211473:1
position: 2211473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2211738:1
position: 2211738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2213734-2213796:1:exon

position:2213734:1
position: 2213734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2213796:1
position: 2213796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2221822-2221908:1:exon

position:2221822:1
position: 2221822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2221908:1
position: 2221908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2224202-2224440:1:exon

position:2224202:1
position: 2224202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2224440:1
position: 2224440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2225632-2225714:1:exon

position:2225632:1
position: 2225632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2225714:1
position: 2225714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2227733-2227900:1:exon

position:2227733:1
position: 2227733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2227900:1
position: 2227900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2228926-2228969:1:exon

position:2228926:1
position: 2228926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2228969:1
position: 2228969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2229877-2230554:1:exon

position:2229877:1
position: 2229877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2230554:1
position: 2230554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2233137-2233259:1:exon

position:2233137:1
position: 2233137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2233259:1
position: 2233259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2234490-2234571:1:exon

position:2234490:1
position: 2234490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2234571:1
position: 2234571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2235656-2235711:1:exon

position:2235656:1
position: 2235656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2235711:1
position: 2235711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2238473-2238577:1:exon

position:2238473:1
position: 2238473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2238577:1
position: 2238577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2239888-2240034:1:exon

position:2239888:1
position: 2239888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2240034:1
position: 2240034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2242138-2242306:1:exon

position:2242138:1
position: 2242138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2242306:1
position: 2242306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2243653-2243835:1:exon

position:2243653:1
position: 2243653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2243835:1
position: 2243835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2244571-2244671:1:exon

position:2244571:1
position: 2244571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2244671:1
position: 2244671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2246545-2246608:1:exon

position:2246545:1
position: 2246545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2246608:1
position: 2246608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2247673-2247894:1:exon

position:2247673:1
position: 2247673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CAPRIN2
product: caprin family member 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_031443856.1
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2210147..2210355,2211473..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2238473..2238577,2239888..2240034,2242138..2242306,2243713..2243835,2244571..2244671,2246545..2246608,2247673..2247894)
location: region:2210147-2247894:1
so has part: feature:2210147-2210355:1:exon
so has part: feature:2211473-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2238473-2238577:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243713-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247673-2247894:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2210147-2210355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2211473-2211738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2238473-2238577:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2243713-2243835:1:exon

position:2243713:1
position: 2243713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2247673-2247894:1:exon

CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CAPRIN2
product: caprin family member 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031443857.1
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2210147..2210355,2211473..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2238473..2238577,2239888..2240034,2242138..2242306,2243653..2243835,2244571..2244671,2246545..2246608,2247641..2247774)
location: region:2210147-2247774:1
so has part: feature:2210147-2210355:1:exon
so has part: feature:2211473-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2238473-2238577:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243653-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247641-2247774:1:exon

position:2247774:1
position: 2247774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2210147-2210355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2211473-2211738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2213734-2213796:1:exon

urn:…
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CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CAPRIN2
product: caprin family member 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_031443858.1
SIO_010081: CAPRIN2
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CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CAPRIN2
product: caprin family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_031443849.1
SIO_010081: CAPRIN2
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CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CAPRIN2
product: caprin family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_031443850.1
SIO_010081: CAPRIN2
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CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CAPRIN2
product: caprin family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_031443851.1
SIO_010081: CAPRIN2
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CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CAPRIN2
product: caprin family member 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_031443853.1
SIO_010081: CAPRIN2
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CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CAPRIN2
product: caprin family member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_031443852.1
SIO_010081: CAPRIN2
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so has part: feature:2235656-2235711:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243653-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247717-2248641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2210153-2210355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2211473-2211738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2243653-2243835:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2247717-2248641:1:exon

CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CAPRIN2
product: caprin family member 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_031443854.1
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2210153..2210355,2211473..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2242138..2242306,2243653..2243835,2244571..2244671,2246545..2246608,2247717..2248641)
location: region:2210153-2248641:1
so has part: feature:2210153-2210355:1:exon
so has part: feature:2211473-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243653-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247717-2248641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2210153-2210355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2211473-2211738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2243653-2243835:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2247717-2248641:1:exon

CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CAPRIN2
product: caprin family member 2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031443860.1
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2210196..2210355,2211473..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2239888..2240034,2242138..2242306,2243713..2243835,2244571..2244671,2246545..2246608,2247673..2247894)
location: region:2210196-2247894:1
so has part: feature:2210196-2210355:1:exon
so has part: feature:2211473-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243713-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247673-2247894:1:exon

position:2210196:1
position: 2210196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2210196-2210355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2211473-2211738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2243713-2243835:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2247673-2247894:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X1
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYGQEEPKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2211487..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2238473..2238577,2239888..2240034,2242138..2242306,2243653..2243835,2244571..2244671,2246545..2246608,2247717..2248285)
location: region:2211487-2248285:1
so has part: feature:2211487-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2238473-2238577:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243653-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247717-2248285:1:exon

XP_031299709.1
type: Protein
SIO_000068: ncbiprotein

position:2211487:1
position: 2211487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2248285:1
position: 2248285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2211487-2211738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238473-2238577:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2243653-2243835:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2247717-2248285:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X2
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYGQEEPKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2211487..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2238473..2238577,2239888..2240034,2242138..2242306,2243656..2243835,2244571..2244671,2246545..2246608,2247717..2248285)
location: region:2211487-2248285:1
so has part: feature:2211487-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2238473-2238577:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243656-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247717-2248285:1:exon

XP_031299710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2211487-2211738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238473-2238577:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2243656-2243835:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2247717-2248285:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X3
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYGQEEPKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2211487..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2238473..2238577,2239888..2240034,2242138..2242306,2243713..2243835,2244571..2244671,2246545..2246608,2247717..2248285)
location: region:2211487-2248285:1
so has part: feature:2211487-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2238473-2238577:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243713-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247717-2248285:1:exon

XP_031299711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2211487-2211738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238473-2238577:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2243713-2243835:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2247717-2248285:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X5
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYGQEEPKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2211487..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2238473..2238577,2239888..2240034,2242138..2242306,2244571..2244671,2246545..2246608,2247717..2248285)
location: region:2211487-2248285:1
so has part: feature:2211487-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2238473-2238577:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247717-2248285:1:exon

XP_031299713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2211487-2211738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238473-2238577:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2247717-2248285:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X4
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYGQEEPKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2211487..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2239888..2240034,2242138..2242306,2243653..2243835,2244571..2244671,2246545..2246608,2247717..2248285)
location: region:2211487-2248285:1
so has part: feature:2211487-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243653-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247717-2248285:1:exon

XP_031299712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2211487-2211738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2243653-2243835:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2247717-2248285:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X6
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYGQEEPKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2211487..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2242138..2242306,2243653..2243835,2244571..2244671,2246545..2246608,2247717..2248285)
location: region:2211487-2248285:1
so has part: feature:2211487-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243653-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247717-2248285:1:exon

XP_031299714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2211487-2211738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2243653-2243835:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2247717-2248285:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X10
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2211487..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2233137..2233259,2234490..2234571,2235656..2235711,2238473..2238577,2239888..2240034,2242138..2242306,2243653..2243835,2244571..2244671,2246545..2246608,2247717..2248285)
location: region:2211487-2248285:1
so has part: feature:2211487-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2238473-2238577:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243653-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247717-2248285:1:exon

XP_031299718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2211487-2211738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2238473-2238577:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2243653-2243835:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2247717-2248285:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X7
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYGQEEPKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRANCFIMRNSLLLIKQQGGVILLR
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2211487..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2238473..2238577,2239888..2240034,2242138..2242306,2243653..2243835,2244571..2244671,2246545..2246608,2247673..2247743)
location: region:2211487-2247743:1
so has part: feature:2211487-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2238473-2238577:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243653-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247673-2247743:1:exon

XP_031299715.1
type: Protein
SIO_000068: ncbiprotein

position:2247743:1
position: 2247743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2211487-2211738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238473-2238577:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2243653-2243835:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2247673-2247743:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X8
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYGQEEPKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRANCFIMRNSLLLIKQQGGVILLR
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2211487..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2238473..2238577,2239888..2240034,2242138..2242306,2243713..2243835,2244571..2244671,2246545..2246608,2247673..2247743)
location: region:2211487-2247743:1
so has part: feature:2211487-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2238473-2238577:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243713-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247673-2247743:1:exon

XP_031299716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2211487-2211738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238473-2238577:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2243713-2243835:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2247673-2247743:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X12
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYGQEEPKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRANCFIMRNSLLLIKQQGGVILLR
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2211487..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2239888..2240034,2242138..2242306,2243713..2243835,2244571..2244671,2246545..2246608,2247673..2247743)
location: region:2211487-2247743:1
so has part: feature:2211487-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243713-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247673-2247743:1:exon

XP_031299720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2211487-2211738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2243713-2243835:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2247673-2247743:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X9
translation: MVQLSPSPFGYQSPSGRSEEGKEGTMKSARPQVNHSHHGESQRALSPLQPALSSATSPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTVLQVQYVLQNLTQEHVQKDFRGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYGQEEPKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRVAD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2211487..2211738,2213734..2213796,2221822..2221908,2224202..2224440,2225632..2225714,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2238473..2238577,2239888..2240034,2242138..2242306,2243653..2243835,2244571..2244671,2246545..2246608,2247641..2247651)
location: region:2211487-2247651:1
so has part: feature:2211487-2211738:1:exon
so has part: feature:2213734-2213796:1:exon
so has part: feature:2221822-2221908:1:exon
so has part: feature:2224202-2224440:1:exon
so has part: feature:2225632-2225714:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2238473-2238577:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243653-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247641-2247651:1:exon

XP_031299717.1
type: Protein
SIO_000068: ncbiprotein

position:2247651:1
position: 2247651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2211487-2211738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2213734-2213796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2221822-2221908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2224202-2224440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2225632-2225714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238473-2238577:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2243653-2243835:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2247641-2247651:1:exon

CAPRIN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CAPRIN2
product: caprin family member 2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_031443859.1
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2224302..2224440,2227733..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2238473..2238577,2239888..2240034,2242138..2242306,2243653..2243835,2244571..2244671,2246545..2246608,2247717..2248641)
location: region:2224302-2248641:1
so has part: feature:2224302-2224440:1:exon
so has part: feature:2227733-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2238473-2238577:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243653-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247717-2248641:1:exon

position:2224302:1
position: 2224302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2224302-2224440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2227733-2227900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2238473-2238577:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2243653-2243835:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2247717-2248641:1:exon

CAPRIN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CAPRIN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caprin-2 isoform X11
translation: MKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQPWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEASVKHPEVSKPAGSLEQRKQEIPKLRSALQEEQRKQDVSKAKPTPSQWKQEAPKPKAGYGQEEPKKQETPKPWPVQLQKDQDPKKQTPKSWAPSVQSEQNVTKSWTTPVCEDQDARQPETPKSWENNAESQKHPLPPQSQISPKSWGVATASLIPNDQLLPGKFNTEPKDVPKPMHQPVGSSSALPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSEAPEAAVPPSKQPPSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKEPPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGSLAFYPAQTNVLPRPSQPFVSSRGSVRGCSRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGNYSQLQFQAREYPGTPYTQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPATNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
SIO_010081: CAPRIN2
subclass of: SO_0000673
so part of: CAPRIN2
location: join(2227741..2227900,2228926..2228969,2229877..2230554,2233137..2233259,2234490..2234571,2235656..2235711,2238473..2238577,2239888..2240034,2242138..2242306,2243653..2243835,2244571..2244671,2246545..2246608,2247717..2248285)
location: region:2227741-2248285:1
so has part: feature:2227741-2227900:1:exon
so has part: feature:2228926-2228969:1:exon
so has part: feature:2229877-2230554:1:exon
so has part: feature:2233137-2233259:1:exon
so has part: feature:2234490-2234571:1:exon
so has part: feature:2235656-2235711:1:exon
so has part: feature:2238473-2238577:1:exon
so has part: feature:2239888-2240034:1:exon
so has part: feature:2242138-2242306:1:exon
so has part: feature:2243653-2243835:1:exon
so has part: feature:2244571-2244671:1:exon
so has part: feature:2246545-2246608:1:exon
so has part: feature:2247717-2248285:1:exon

XP_031299719.1
type: Protein
SIO_000068: ncbiprotein

position:2227741:1
position: 2227741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2227741-2227900:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2228926-2228969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2229877-2230554:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2233137-2233259:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2234490-2234571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2235656-2235711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2238473-2238577:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2239888-2240034:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2242138-2242306:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2243653-2243835:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2244571-2244671:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2246545-2246608:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2247717-2248285:1:exon

LOC116150324
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150324
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2238021..2241453)
location: region:2238021-2241453:-1
so has part: feature:2238021-2241453:-1:exon
subclass of: SO_0000011

116150324
type: Gene
SIO_000068: ncbigene

position:2238021:-1
position: 2238021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2241453:-1
position: 2241453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2238021-2241453:-1:exon

LOC116150324
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150324
product: uncharacterized LOC116150324
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004134012.1
SIO_010081: LOC116150324
subclass of: SO_0000673
so part of: LOC116150324
location: complement(join(2238021..2238031,2240666..2240670,2241372..2241453))
location: region:2238021-2241453:-1
so has part: feature:2241372-2241453:-1:exon
so has part: feature:2240666-2240670:-1:exon
so has part: feature:2238021-2238031:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2241372-2241453:-1:exon

position:2241372:-1
position: 2241372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2240666-2240670:-1:exon

position:2240666:-1
position: 2240666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2240670:-1
position: 2240670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2238021-2238031:-1:exon

position:2238031:-1
position: 2238031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116150323
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2249506..2259922)
location: region:2249506-2259922:-1
so has part: feature:2249506-2259922:-1:exon
subclass of: SO_0000011

116150323
type: Gene
SIO_000068: ncbigene

position:2249506:-1
position: 2249506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2259922:-1
position: 2259922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2249506-2259922:-1:exon

LOC116150323
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150323
product: uncharacterized LOC116150323
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004134011.1
SIO_010081: LOC116150323
subclass of: SO_0000673
so part of: LOC116150323
location: complement(join(2249506..2250453,2252587..2252718,2259307..2259922))
location: region:2249506-2259922:-1
so has part: feature:2259307-2259922:-1:exon
so has part: feature:2252587-2252718:-1:exon
so has part: feature:2249506-2250453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2259307-2259922:-1:exon

position:2259307:-1
position: 2259307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2252587-2252718:-1:exon

position:2252587:-1
position: 2252587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2252718:-1
position: 2252718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2249506-2250453:-1:exon

position:2250453:-1
position: 2250453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IPO8
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: IPO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2258638..2318635
location: region:2258638-2318635:1
so has part: feature:2258638-2318635:1:exon
subclass of: SO_0000010

105103942
type: Gene
SIO_000068: ncbigene

position:2258638:1
position: 2258638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2318635:1
position: 2318635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2258638-2318635:1:exon

IPO8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IPO8
product: importin 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_031443861.1
SIO_010081: IPO8
subclass of: SO_0000673
so part of: IPO8
location: join(2258638..2259089,2264596..2264677,2267680..2267836,2270457..2270615,2271599..2271755,2276296..2276385,2277885..2277979,2278406..2278490,2280192..2280326,2281997..2282096,2284229..2284305,2284598..2284714,2285166..2285255,2286546..2286711,2287641..2287801,2288605..2288730,2292093..2292159,2295298..2295423,2296106..2296203,2298634..2298729,2306010..2306230,2308223..2308428,2313564..2313767,2315382..2315498,2316639..2318635)
location: region:2258638-2318635:1
so has part: feature:2258638-2259089:1:exon
so has part: feature:2264596-2264677:1:exon
so has part: feature:2267680-2267836:1:exon
so has part: feature:2270457-2270615:1:exon
so has part: feature:2271599-2271755:1:exon
so has part: feature:2276296-2276385:1:exon
so has part: feature:2277885-2277979:1:exon
so has part: feature:2278406-2278490:1:exon
so has part: feature:2280192-2280326:1:exon
so has part: feature:2281997-2282096:1:exon
so has part: feature:2284229-2284305:1:exon
so has part: feature:2284598-2284714:1:exon
so has part: feature:2285166-2285255:1:exon
so has part: feature:2286546-2286711:1:exon
so has part: feature:2287641-2287801:1:exon
so has part: feature:2288605-2288730:1:exon
so has part: feature:2292093-2292159:1:exon
so has part: feature:2295298-2295423:1:exon
so has part: feature:2296106-2296203:1:exon
so has part: feature:2298634-2298729:1:exon
so has part: feature:2306010-2306230:1:exon
so has part: feature:2308223-2308428:1:exon
so has part: feature:2313564-2313767:1:exon
so has part: feature:2315382-2315498:1:exon
so has part: feature:2316639-2318635:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2258638-2259089:1:exon

position:2259089:1
position: 2259089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2264596-2264677:1:exon

position:2264596:1
position: 2264596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2264677:1
position: 2264677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2267680-2267836:1:exon

position:2267680:1
position: 2267680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2267836:1
position: 2267836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2270457-2270615:1:exon

position:2270457:1
position: 2270457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2270615:1
position: 2270615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2271599-2271755:1:exon

position:2271599:1
position: 2271599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2271755:1
position: 2271755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2276296-2276385:1:exon

position:2276296:1
position: 2276296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2276385:1
position: 2276385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2277885-2277979:1:exon

position:2277885:1
position: 2277885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2277979:1
position: 2277979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2278406-2278490:1:exon

position:2278406:1
position: 2278406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2278490:1
position: 2278490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2280192-2280326:1:exon

position:2280192:1
position: 2280192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2280326:1
position: 2280326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2281997-2282096:1:exon

position:2281997:1
position: 2281997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2282096:1
position: 2282096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2284229-2284305:1:exon

position:2284229:1
position: 2284229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2284305:1
position: 2284305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2284598-2284714:1:exon

position:2284598:1
position: 2284598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2284714:1
position: 2284714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2285166-2285255:1:exon

position:2285166:1
position: 2285166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2285255:1
position: 2285255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2286546-2286711:1:exon

position:2286546:1
position: 2286546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2286711:1
position: 2286711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2287641-2287801:1:exon

position:2287641:1
position: 2287641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2287801:1
position: 2287801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2288605-2288730:1:exon

position:2288605:1
position: 2288605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2288730:1
position: 2288730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2292093-2292159:1:exon

position:2292093:1
position: 2292093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2292159:1
position: 2292159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2295298-2295423:1:exon

position:2295298:1
position: 2295298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2295423:1
position: 2295423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2296106-2296203:1:exon

position:2296106:1
position: 2296106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2296203:1
position: 2296203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2298634-2298729:1:exon

position:2298634:1
position: 2298634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2298729:1
position: 2298729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2306010-2306230:1:exon

position:2306010:1
position: 2306010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2306230:1
position: 2306230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2308223-2308428:1:exon

position:2308223:1
position: 2308223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308428:1
position: 2308428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2313564-2313767:1:exon

position:2313564:1
position: 2313564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2313767:1
position: 2313767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2315382-2315498:1:exon

position:2315382:1
position: 2315382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2315498:1
position: 2315498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2316639-2318635:1:exon

position:2316639:1
position: 2316639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IPO8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IPO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin-8
translation: MDLNRIIQALKGTIDPKLRIAAENELNQSYKIINFAPSLLRIIVSDHVEFPVRQAAAIYLKNMVTQYWPDREPPPGEAIFPFNIHENDRQQIRDNIVEGIIRSPDLVRVQLTMCLRAIIKYDFPGHWPAVVDKIDYYLQSQSSGSWLGSLLCLYQLVKTYEYKKAEEREPLIAAMQIFLPRIQQQIMQLLPDSSHYSVLLQKQILKIFYALVQYALPLQLVNNQTMTAWMEIFRTIIDRTVPPETLQIDEDDRPELVWWKCKKWALHIVARLFERYGSPGNVTKEYFEFSEFFLKTYAVGIQQVLLKILDQFRQKEYVAPRVLQQAFNYLNQGIVHSVTWKQMKPHIQNISEDVIFSVMCYKDEDEELWQEDPYEYIRMKFDIFEDYASPTTAAQTLLYTAAKKRKEVLPKMMAFCYQILTDPNFDPRKKDGALHVIGSLADILLKKSLFKDQMELLLQNHVFPLLLSNLGYLRARSCWVLHAFSSLKFHNELNLRNAVDLAKKSLIEDKEMPVKVEAALALQSLISNQAQAKEYMKPHVRPIMQELLHIVRETENDDVTNVIQKMICEYSQEVASIAVDMTQHLAEIFGKVLQSDEYEEVEDKTVMAMGILHTIDTILTVVEDHKEVTQQLESICLRIIDLVLQKHVIEFYEEILSLAYSLTCRVISPQMWQLLGILYEVFQQDCFEYFTDMMPLLHNYVTIDTNTLLSNPKHLEILFTMCRKVLCGDAGEDAECHAAKLLEVIILQCKGRGIDQCIPLFVQLVLERLTRGVKTSELRTMCLQVAIAALYYKPDLLLHTLERIQLPHNPGPVTVQFINQWMNDTDCFLGHHDRKMCIIGLSILLELQNRPPAVDAVVGQIVPSILFLFLGLKQVCATRQLVNREDRSKAEKTDVEENEEISSDEEETNVTAQAMQSNNGRGEDEEEDDDDWDEEVLEETALEGFSTPLDLDNSVDEYQFFTQALLTVQNRDAAWYQLLMAPLSEDQRRALQEVYTLAEHRRTVAEAKKKIEQQGGFTFENKGVLSAFNFGTMPSDN
SIO_010081: IPO8
subclass of: SO_0000673
so part of: IPO8
location: join(2259006..2259089,2264596..2264677,2267680..2267836,2270457..2270615,2271599..2271755,2276296..2276385,2277885..2277979,2278406..2278490,2280192..2280326,2281997..2282096,2284229..2284305,2284598..2284714,2285166..2285255,2286546..2286711,2287641..2287801,2288605..2288730,2292093..2292159,2295298..2295423,2296106..2296203,2298634..2298729,2306010..2306230,2308223..2308428,2313564..2313767,2315382..2315498,2316639..2316736)
location: region:2259006-2316736:1
so has part: feature:2259006-2259089:1:exon
so has part: feature:2264596-2264677:1:exon
so has part: feature:2267680-2267836:1:exon
so has part: feature:2270457-2270615:1:exon
so has part: feature:2271599-2271755:1:exon
so has part: feature:2276296-2276385:1:exon
so has part: feature:2277885-2277979:1:exon
so has part: feature:2278406-2278490:1:exon
so has part: feature:2280192-2280326:1:exon
so has part: feature:2281997-2282096:1:exon
so has part: feature:2284229-2284305:1:exon
so has part: feature:2284598-2284714:1:exon
so has part: feature:2285166-2285255:1:exon
so has part: feature:2286546-2286711:1:exon
so has part: feature:2287641-2287801:1:exon
so has part: feature:2288605-2288730:1:exon
so has part: feature:2292093-2292159:1:exon
so has part: feature:2295298-2295423:1:exon
so has part: feature:2296106-2296203:1:exon
so has part: feature:2298634-2298729:1:exon
so has part: feature:2306010-2306230:1:exon
so has part: feature:2308223-2308428:1:exon
so has part: feature:2313564-2313767:1:exon
so has part: feature:2315382-2315498:1:exon
so has part: feature:2316639-2316736:1:exon

XP_031299721.1
type: Protein
SIO_000068: ncbiprotein

position:2259006:1
position: 2259006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2316736:1
position: 2316736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2259006-2259089:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2264596-2264677:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2267680-2267836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2270457-2270615:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2271599-2271755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2276296-2276385:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2277885-2277979:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2278406-2278490:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2280192-2280326:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2281997-2282096:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2284229-2284305:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2284598-2284714:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2285166-2285255:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2286546-2286711:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2287641-2287801:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2288605-2288730:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2292093-2292159:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2295298-2295423:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2296106-2296203:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2298634-2298729:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2306010-2306230:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2308223-2308428:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2313564-2313767:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2315382-2315498:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2316639-2316736:1:exon

TRNAA-UGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAA-UGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2261139..2261210)
location: region:2261139-2261210:-1
so has part: feature:2261139-2261210:-1:exon
subclass of: SO_0000663

116150431
type: Gene
SIO_000068: ncbigene

position:2261139:-1
position: 2261139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2261210:-1
position: 2261210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2261139-2261210:-1:exon

TRNAA-UGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAA-UGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2261176..2261178),aa:Ala, seq:tgc)
SIO_010081: TRNAA-UGC
subclass of: SO_0000673
so part of: TRNAA-UGC
location: complement(2261139..2261210)
location: region:2261139-2261210:-1
so has part: feature:2261139-2261210:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2261139-2261210:-1:exon

TRNAA-GGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAA-GGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2326286..2326357)
location: region:2326286-2326357:-1
so has part: feature:2326286-2326357:-1:exon
subclass of: SO_0000663

116150432
type: Gene
SIO_000068: ncbigene

position:2326286:-1
position: 2326286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2326357:-1
position: 2326357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2326286-2326357:-1:exon

TRNAA-GGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAA-GGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon GGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2326323..2326325),aa:Ala, seq:ggc)
SIO_010081: TRNAA-GGC
subclass of: SO_0000673
so part of: TRNAA-GGC
location: complement(2326286..2326357)
location: region:2326286-2326357:-1
so has part: feature:2326286-2326357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2326286-2326357:-1:exon

TMTC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TMTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2553512..2788762
location: region:2553512-2788762:1
so has part: feature:2553512-2788762:1:exon
subclass of: SO_0000010

105103941
type: Gene
SIO_000068: ncbigene

position:2553512:1
position: 2553512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2788762:1
position: 2788762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2553512-2788762:1:exon

TMTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TMTC1
product: transmembrane O-mannosyltransferase targeting cadherins 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_031443862.1
SIO_010081: TMTC1
subclass of: SO_0000673
so part of: TMTC1
location: join(2553512..2554005,2574098..2574275,2582785..2582858,2585301..2585477,2589487..2589681,2661447..2661528,2663637..2663740,2675643..2675832,2698834..2698955,2713561..2713728,2724213..2724326,2739696..2739839,2757461..2757569,2769600..2769702,2771766..2771901,2772706..2772850,2773999..2774136,2775492..2775614,2778143..2778220,2782835..2788762)
location: region:2553512-2788762:1
so has part: feature:2553512-2554005:1:exon
so has part: feature:2574098-2574275:1:exon
so has part: feature:2582785-2582858:1:exon
so has part: feature:2585301-2585477:1:exon
so has part: feature:2589487-2589681:1:exon
so has part: feature:2661447-2661528:1:exon
so has part: feature:2663637-2663740:1:exon
so has part: feature:2675643-2675832:1:exon
so has part: feature:2698834-2698955:1:exon
so has part: feature:2713561-2713728:1:exon
so has part: feature:2724213-2724326:1:exon
so has part: feature:2739696-2739839:1:exon
so has part: feature:2757461-2757569:1:exon
so has part: feature:2769600-2769702:1:exon
so has part: feature:2771766-2771901:1:exon
so has part: feature:2772706-2772850:1:exon
so has part: feature:2773999-2774136:1:exon
so has part: feature:2775492-2775614:1:exon
so has part: feature:2778143-2778220:1:exon
so has part: feature:2782835-2788762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2553512-2554005:1:exon

position:2554005:1
position: 2554005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2574098-2574275:1:exon

position:2574098:1
position: 2574098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2574275:1
position: 2574275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2582785-2582858:1:exon

position:2582785:1
position: 2582785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2582858:1
position: 2582858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2585301-2585477:1:exon

position:2585301:1
position: 2585301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2585477:1
position: 2585477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2589487-2589681:1:exon

position:2589487:1
position: 2589487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2589681:1
position: 2589681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2661447-2661528:1:exon

position:2661447:1
position: 2661447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2661528:1
position: 2661528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2663637-2663740:1:exon

position:2663637:1
position: 2663637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2663740:1
position: 2663740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2675643-2675832:1:exon

position:2675643:1
position: 2675643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2675832:1
position: 2675832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2698834-2698955:1:exon

position:2698834:1
position: 2698834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2698955:1
position: 2698955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2713561-2713728:1:exon

position:2713561:1
position: 2713561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2713728:1
position: 2713728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2724213-2724326:1:exon

position:2724213:1
position: 2724213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2724326:1
position: 2724326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2739696-2739839:1:exon

position:2739696:1
position: 2739696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2739839:1
position: 2739839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2757461-2757569:1:exon

position:2757461:1
position: 2757461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2757569:1
position: 2757569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2769600-2769702:1:exon

position:2769600:1
position: 2769600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2769702:1
position: 2769702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2771766-2771901:1:exon

position:2771766:1
position: 2771766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2771901:1
position: 2771901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2772706-2772850:1:exon

position:2772706:1
position: 2772706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2772850:1
position: 2772850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2773999-2774136:1:exon

position:2773999:1
position: 2773999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2774136:1
position: 2774136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2775492-2775614:1:exon

position:2775492:1
position: 2775492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2775614:1
position: 2775614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2778143-2778220:1:exon

position:2778143:1
position: 2778143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2778220:1
position: 2778220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2782835-2788762:1:exon

position:2782835:1
position: 2782835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TMTC1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein O-mannosyl-transferase TMTC1
translation: MPEPTSTAARRRGPAGEDARRPRGPGQRSGGGGGGGTMLVTGCARGGGGDRAPSRRRGCGLAPAGAAALLAGASCLCYGRSLRGEFVHDDVWAIVNNPDVRPGAPLHWGIFSNDFWGKGMAENTSHKSYRPLCVLTFKLNIFLTGMNPFYFHAVNVILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPIHTEAVAGIVGRADVLACLLFLLAFLSYNRSVDQCCAGERVPPTASPFFLLLSLFLGTCAMLVKETGITVFGVCLVYDLFSLSHNHDKSSNGVLGARSPQPPGSAQPAHPPRENGKPQRPPHRGAWGGCHAPSPPEPKSSGFPVSPRAVRSLMRYLTASSNRNFLLTMRPFLKRAILVISYVVVVLYFRLWIMGGSMPLFSEQDNPASFSPYILTRFLTYSYLLAFNVWLLLAPVTLCYDWQVGSIPLVETIWDMRNLATILLAVVMAVLSLHCLAAFKRLEHREVLAGLLFLVFPFIPASNLFFRVGFVVAERVLYMPSMGYCILVVHGLSKLCTWLNRCGATALSVSTVLLLLLFSWKTVKQNEIWLSRESLFRSGVQTLPHNAKVHYNYANFLKDQGRDREAIYHYRTALRLYPRHASALNNLGTLTRDTAEAKMYYQRALQLNPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNNYGVFLVDTGAPEKAVAHYQQAIRLSPSHHVAMVNLGRLCRSLGDNSEAEEWYKRALQVARRAEILAPLGALYYNTGRYEEALQVYREATALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQELHEKALDAIDKALKLKPKDPKVISELFFTKGNQLREQNLLDKAFESYRAAVELNPDQAQAWMNMGGIQHIKGNYVSARAYYETALQLVPDSKLLQENLAKLDRLEKRLQEVREKDQT
SIO_010081: TMTC1
subclass of: SO_0000673
so part of: TMTC1
location: join(2553592..2554005,2574098..2574275,2582785..2582858,2585301..2585477,2589487..2589681,2661447..2661528,2663637..2663740,2675643..2675832,2698834..2698955,2713561..2713728,2724213..2724326,2739696..2739839,2757461..2757569,2769600..2769702,2771766..2771901,2772706..2772850,2773999..2774136,2775492..2775614,2778143..2778220,2782835..2782975)
location: region:2553592-2782975:1
so has part: feature:2553592-2554005:1:exon
so has part: feature:2574098-2574275:1:exon
so has part: feature:2582785-2582858:1:exon
so has part: feature:2585301-2585477:1:exon
so has part: feature:2589487-2589681:1:exon
so has part: feature:2661447-2661528:1:exon
so has part: feature:2663637-2663740:1:exon
so has part: feature:2675643-2675832:1:exon
so has part: feature:2698834-2698955:1:exon
so has part: feature:2713561-2713728:1:exon
so has part: feature:2724213-2724326:1:exon
so has part: feature:2739696-2739839:1:exon
so has part: feature:2757461-2757569:1:exon
so has part: feature:2769600-2769702:1:exon
so has part: feature:2771766-2771901:1:exon
so has part: feature:2772706-2772850:1:exon
so has part: feature:2773999-2774136:1:exon
so has part: feature:2775492-2775614:1:exon
so has part: feature:2778143-2778220:1:exon
so has part: feature:2782835-2782975:1:exon

XP_031299722.1
type: Protein
SIO_000068: ncbiprotein

position:2553592:1
position: 2553592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2782975:1
position: 2782975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2553592-2554005:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2574098-2574275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2582785-2582858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2585301-2585477:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2589487-2589681:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2661447-2661528:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2663637-2663740:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2675643-2675832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2698834-2698955:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2713561-2713728:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2724213-2724326:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2739696-2739839:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2757461-2757569:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2769600-2769702:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2771766-2771901:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2772706-2772850:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2773999-2774136:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2775492-2775614:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2778143-2778220:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2782835-2782975:1:exon

LOC116150416
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150416
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2760629..2760734)
location: region:2760629-2760734:-1
so has part: feature:2760629-2760734:-1:exon
subclass of: SO_0000623

116150416
type: Gene
SIO_000068: ncbigene

position:2760629:-1
position: 2760629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2760734:-1
position: 2760734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2760629-2760734:-1:exon

LOC116150416
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snRNA
gene: LOC116150416
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004134176.1
SIO_010081: LOC116150416
subclass of: SO_0000673
so part of: LOC116150416
location: complement(2760629..2760734)
location: region:2760629-2760734:-1
so has part: feature:2760629-2760734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2760629-2760734:-1:exon

TRNAP-AGG
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAP-AGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2772409..2772481)
location: region:2772409-2772481:-1
so has part: feature:2772409-2772481:-1:exon
subclass of: SO_0000663

116150433
type: Gene
SIO_000068: ncbigene

position:2772409:-1
position: 2772409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2772481:-1
position: 2772481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2772409-2772481:-1:exon

TRNAP-AGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAP-AGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon AGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2772446..2772448),aa:Pro, seq:agg)
SIO_010081: TRNAP-AGG
subclass of: SO_0000673
so part of: TRNAP-AGG
location: complement(2772409..2772481)
location: region:2772409-2772481:-1
so has part: feature:2772409-2772481:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2772409-2772481:-1:exon

ERGIC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ERGIC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2846938..2878825
location: region:2846938-2878825:1
so has part: feature:2846938-2878825:1:exon
subclass of: SO_0000010

105103940
type: Gene
SIO_000068: ncbigene

position:2846938:1
position: 2846938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2878825:1
position: 2878825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2846938-2878825:1:exon

ERGIC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ERGIC2
product: ERGIC and golgi 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_010997609.2
SIO_010081: ERGIC2
subclass of: SO_0000673
so part of: ERGIC2
location: join(2846938..2847059,2851927..2852069,2853659..2853767,2855652..2855698,2856925..2856995,2862811..2862851,2865632..2865733,2867063..2867158,2869024..2869079,2870126..2870224,2873185..2873282,2874869..2875031,2876108..2876190,2876352..2878825)
location: region:2846938-2878825:1
so has part: feature:2846938-2847059:1:exon
so has part: feature:2851927-2852069:1:exon
so has part: feature:2853659-2853767:1:exon
so has part: feature:2855652-2855698:1:exon
so has part: feature:2856925-2856995:1:exon
so has part: feature:2862811-2862851:1:exon
so has part: feature:2865632-2865733:1:exon
so has part: feature:2867063-2867158:1:exon
so has part: feature:2869024-2869079:1:exon
so has part: feature:2870126-2870224:1:exon
so has part: feature:2873185-2873282:1:exon
so has part: feature:2874869-2875031:1:exon
so has part: feature:2876108-2876190:1:exon
so has part: feature:2876352-2878825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2846938-2847059:1:exon

position:2847059:1
position: 2847059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2851927-2852069:1:exon

position:2851927:1
position: 2851927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2852069:1
position: 2852069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2853659-2853767:1:exon

position:2853659:1
position: 2853659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2853767:1
position: 2853767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2855652-2855698:1:exon

position:2855652:1
position: 2855652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2855698:1
position: 2855698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2856925-2856995:1:exon

position:2856925:1
position: 2856925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2856995:1
position: 2856995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2862811-2862851:1:exon

position:2862811:1
position: 2862811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2862851:1
position: 2862851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2865632-2865733:1:exon

position:2865632:1
position: 2865632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2865733:1
position: 2865733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2867063-2867158:1:exon

position:2867063:1
position: 2867063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2867158:1
position: 2867158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2869024-2869079:1:exon

position:2869024:1
position: 2869024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2869079:1
position: 2869079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2870126-2870224:1:exon

position:2870126:1
position: 2870126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2870224:1
position: 2870224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2873185-2873282:1:exon

position:2873185:1
position: 2873185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2873282:1
position: 2873282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2874869-2875031:1:exon

position:2874869:1
position: 2874869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2875031:1
position: 2875031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2876108-2876190:1:exon

position:2876108:1
position: 2876108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2876190:1
position: 2876190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2876352-2878825:1:exon

position:2876352:1
position: 2876352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERGIC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ERGIC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum-Golgi intermediate compartment protein 2
translation: MRRLNRKKTLSLVRELDAFPKVPDSYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKDFSSKLRINIDITVAMKCQYVGADVLDLAETMVASADGLVYEPAIFDLSPQQKEWQRMLQLIQSRLQEEHSLQDVIFKSAFKSASTALPPREDDSSQPPDACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHDSYNFSHRIDHLSFGEPVPGIINPLDGTEKIALDHNQMFQYFITVVPTRLNTYKISADTHQFSVTERERVINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGMLHGIGKFIVEIIYCRFRLGAYKPVNSVPFEDGHTDNHLPLLENNTH
SIO_010081: ERGIC2
subclass of: SO_0000673
so part of: ERGIC2
location: join(2851964..2852069,2853659..2853767,2855652..2855698,2856925..2856995,2862811..2862851,2865632..2865733,2867063..2867158,2869024..2869079,2870126..2870224,2873185..2873282,2874869..2875031,2876108..2876190,2876352..2876414)
location: region:2851964-2876414:1
so has part: feature:2851964-2852069:1:exon
so has part: feature:2853659-2853767:1:exon
so has part: feature:2855652-2855698:1:exon
so has part: feature:2856925-2856995:1:exon
so has part: feature:2862811-2862851:1:exon
so has part: feature:2865632-2865733:1:exon
so has part: feature:2867063-2867158:1:exon
so has part: feature:2869024-2869079:1:exon
so has part: feature:2870126-2870224:1:exon
so has part: feature:2873185-2873282:1:exon
so has part: feature:2874869-2875031:1:exon
so has part: feature:2876108-2876190:1:exon
so has part: feature:2876352-2876414:1:exon

XP_010995911.1
type: Protein
SIO_000068: ncbiprotein

position:2851964:1
position: 2851964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2876414:1
position: 2876414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2851964-2852069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2853659-2853767:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2855652-2855698:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2856925-2856995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2862811-2862851:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2865632-2865733:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2867063-2867158:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2869024-2869079:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2870126-2870224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2873185-2873282:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2874869-2875031:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2876108-2876190:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2876352-2876414:1:exon

FAR2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: FAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2881338..3004629)
location: region:2881338-3004629:-1
so has part: feature:2881338-3004629:-1:exon
subclass of: SO_0000010

105103939
type: Gene
SIO_000068: ncbigene

position:2881338:-1
position: 2881338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3004629:-1
position: 3004629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881338-3004629:-1:exon

FAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAR2
product: fatty acyl-CoA reductase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031443865.1
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2881338..2883269,2884195..2884322,2886905..2887034,2889574..2889745,2891865..2891932,2892812..2892930,2894756..2894800,2896192..2896369,2905976..2906155,2909106..2909281,2922549..2922737))
location: region:2881338-2922737:-1
so has part: feature:2922549-2922737:-1:exon
so has part: feature:2909106-2909281:-1:exon
so has part: feature:2905976-2906155:-1:exon
so has part: feature:2896192-2896369:-1:exon
so has part: feature:2894756-2894800:-1:exon
so has part: feature:2892812-2892930:-1:exon
so has part: feature:2891865-2891932:-1:exon
so has part: feature:2889574-2889745:-1:exon
so has part: feature:2886905-2887034:-1:exon
so has part: feature:2884195-2884322:-1:exon
so has part: feature:2881338-2883269:-1:exon

position:2922737:-1
position: 2922737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2922549-2922737:-1:exon

position:2922549:-1
position: 2922549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2909106-2909281:-1:exon

position:2909106:-1
position: 2909106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2909281:-1
position: 2909281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2905976-2906155:-1:exon

position:2905976:-1
position: 2905976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2906155:-1
position: 2906155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2896192-2896369:-1:exon

position:2896192:-1
position: 2896192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2896369:-1
position: 2896369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2894756-2894800:-1:exon

position:2894756:-1
position: 2894756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2894800:-1
position: 2894800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2892812-2892930:-1:exon

position:2892812:-1
position: 2892812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2892930:-1
position: 2892930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2891865-2891932:-1:exon

position:2891865:-1
position: 2891865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2891932:-1
position: 2891932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2889574-2889745:-1:exon

position:2889574:-1
position: 2889574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2889745:-1
position: 2889745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2886905-2887034:-1:exon

position:2886905:-1
position: 2886905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2887034:-1
position: 2887034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2884195-2884322:-1:exon

position:2884195:-1
position: 2884195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2884322:-1
position: 2884322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2881338-2883269:-1:exon

position:2883269:-1
position: 2883269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAR2
product: fatty acyl-CoA reductase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031443864.1
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2883107..2883269,2884195..2884322,2886905..2887034,2889574..2889745,2891865..2891932,2892812..2892930,2894756..2894800,2896192..2896369,2905976..2906155,2909106..2909281,2922549..2922777,3004387..3004629))
location: region:2883107-3004629:-1
so has part: feature:3004387-3004629:-1:exon
so has part: feature:2922549-2922777:-1:exon
so has part: feature:2909106-2909281:-1:exon
so has part: feature:2905976-2906155:-1:exon
so has part: feature:2896192-2896369:-1:exon
so has part: feature:2894756-2894800:-1:exon
so has part: feature:2892812-2892930:-1:exon
so has part: feature:2891865-2891932:-1:exon
so has part: feature:2889574-2889745:-1:exon
so has part: feature:2886905-2887034:-1:exon
so has part: feature:2884195-2884322:-1:exon
so has part: feature:2883107-2883269:-1:exon

position:2883107:-1
position: 2883107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3004387-3004629:-1:exon

position:3004387:-1
position: 3004387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2922549-2922777:-1:exon

position:2922777:-1
position: 2922777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2909106-2909281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2905976-2906155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2896192-2896369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2894756-2894800:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2892812-2892930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2891865-2891932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2889574-2889745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2886905-2887034:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2884195-2884322:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2883107-2883269:-1:exon

FAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAR2
product: fatty acyl-CoA reductase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_010997608.2
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2883107..2883269,2884195..2884322,2886905..2887034,2889574..2889745,2891865..2891932,2892812..2892930,2894756..2894800,2896192..2896369,2905976..2906155,2909106..2909281,2922549..2922777,3003739..3004629))
location: region:2883107-3004629:-1
so has part: feature:3003739-3004629:-1:exon
so has part: feature:2922549-2922777:-1:exon
so has part: feature:2909106-2909281:-1:exon
so has part: feature:2905976-2906155:-1:exon
so has part: feature:2896192-2896369:-1:exon
so has part: feature:2894756-2894800:-1:exon
so has part: feature:2892812-2892930:-1:exon
so has part: feature:2891865-2891932:-1:exon
so has part: feature:2889574-2889745:-1:exon
so has part: feature:2886905-2887034:-1:exon
so has part: feature:2884195-2884322:-1:exon
so has part: feature:2883107-2883269:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3003739-3004629:-1:exon

position:3003739:-1
position: 3003739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2922549-2922777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2909106-2909281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2905976-2906155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2896192-2896369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2894756-2894800:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2892812-2892930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2891865-2891932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2889574-2889745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2886905-2887034:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2884195-2884322:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2883107-2883269:-1:exon

FAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAR2
product: fatty acyl-CoA reductase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031443863.1
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2883107..2883269,2884195..2884322,2886905..2887034,2889574..2889745,2891865..2891932,2892812..2892930,2894756..2894800,2896192..2896369,2905976..2906155,2909106..2909281,2922549..2922777,2946921..2947081))
location: region:2883107-2947081:-1
so has part: feature:2946921-2947081:-1:exon
so has part: feature:2922549-2922777:-1:exon
so has part: feature:2909106-2909281:-1:exon
so has part: feature:2905976-2906155:-1:exon
so has part: feature:2896192-2896369:-1:exon
so has part: feature:2894756-2894800:-1:exon
so has part: feature:2892812-2892930:-1:exon
so has part: feature:2891865-2891932:-1:exon
so has part: feature:2889574-2889745:-1:exon
so has part: feature:2886905-2887034:-1:exon
so has part: feature:2884195-2884322:-1:exon
so has part: feature:2883107-2883269:-1:exon

position:2947081:-1
position: 2947081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2946921-2947081:-1:exon

position:2946921:-1
position: 2946921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2922549-2922777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2909106-2909281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2905976-2906155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2896192-2896369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2894756-2894800:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2892812-2892930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2891865-2891932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2889574-2889745:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2886905-2887034:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2884195-2884322:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2883107-2883269:-1:exon

FAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acyl-CoA reductase 2
translation: MSMISAFYNGKSILITGATGFLGKVMMEKLLRTSPDLKVIYILVRPKAGQTLQQRVFQILNSKLFEKVKEVCPKVHEKIRAISADLNQHDLAISKEDMQELLSHTNIIFHCAATVRFDDHLRHAVQLNVTATQQLLSIASQMPKLEAFIHISTAFANCNLKHIDEVIYPCAVEPKKIIDSMEWLDDAIIDEITPKLIGDRPNTYTYTKALGEMVLQQEGGNLNIAIIRPSIVGATWQEPFPGWIDSINGPTGLIVAAGKGFLRSIRATPMAVADLIPVDLVINLTLAVGWYTAVHRPKSTLIYHCTSGNLNPCHWGKMGFQVLATFEKIPFEKAFRRPNADFTTNNITTHYWNAVSHRVPAIIYDVYLRLTGRKPRMTKVMNRLLRTLSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPEARQHLKRLRNIHYLFNTALFLIAWRLLIARSQVARNVWFFIVSFCYKLLSYFRASSRLKV
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2883107..2883269,2884195..2884322,2886905..2887034,2889574..2889745,2891865..2891932,2892812..2892930,2894756..2894800,2896192..2896369,2905976..2906155,2909106..2909281,2922549..2922737))
location: region:2883107-2922737:-1
so has part: feature:2922549-2922737:-1:exon
so has part: feature:2909106-2909281:-1:exon
so has part: feature:2905976-2906155:-1:exon
so has part: feature:2896192-2896369:-1:exon
so has part: feature:2894756-2894800:-1:exon
so has part: feature:2892812-2892930:-1:exon
so has part: feature:2891865-2891932:-1:exon
so has part: feature:2889574-2889745:-1:exon
so has part: feature:2886905-2887034:-1:exon
so has part: feature:2884195-2884322:-1:exon
so has part: feature:2883107-2883269:-1:exon

XP_031299723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2922549-2922737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2909106-2909281:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2905976-2906155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2896192-2896369:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2894756-2894800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2892812-2892930:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2891865-2891932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2889574-2889745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2886905-2887034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2884195-2884322:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2883107-2883269:-1:exon

FAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acyl-CoA reductase 2
translation: MSMISAFYNGKSILITGATGFLGKVMMEKLLRTSPDLKVIYILVRPKAGQTLQQRVFQILNSKLFEKVKEVCPKVHEKIRAISADLNQHDLAISKEDMQELLSHTNIIFHCAATVRFDDHLRHAVQLNVTATQQLLSIASQMPKLEAFIHISTAFANCNLKHIDEVIYPCAVEPKKIIDSMEWLDDAIIDEITPKLIGDRPNTYTYTKALGEMVLQQEGGNLNIAIIRPSIVGATWQEPFPGWIDSINGPTGLIVAAGKGFLRSIRATPMAVADLIPVDLVINLTLAVGWYTAVHRPKSTLIYHCTSGNLNPCHWGKMGFQVLATFEKIPFEKAFRRPNADFTTNNITTHYWNAVSHRVPAIIYDVYLRLTGRKPRMTKVMNRLLRTLSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPEARQHLKRLRNIHYLFNTALFLIAWRLLIARSQVARNVWFFIVSFCYKLLSYFRASSRLKV
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2883107..2883269,2884195..2884322,2886905..2887034,2889574..2889745,2891865..2891932,2892812..2892930,2894756..2894800,2896192..2896369,2905976..2906155,2909106..2909281,2922549..2922737))
location: region:2883107-2922737:-1
so has part: feature:2922549-2922737:-1:exon
so has part: feature:2909106-2909281:-1:exon
so has part: feature:2905976-2906155:-1:exon
so has part: feature:2896192-2896369:-1:exon
so has part: feature:2894756-2894800:-1:exon
so has part: feature:2892812-2892930:-1:exon
so has part: feature:2891865-2891932:-1:exon
so has part: feature:2889574-2889745:-1:exon
so has part: feature:2886905-2887034:-1:exon
so has part: feature:2884195-2884322:-1:exon
so has part: feature:2883107-2883269:-1:exon

XP_031299724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2922549-2922737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2909106-2909281:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2905976-2906155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2896192-2896369:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2894756-2894800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2892812-2892930:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2891865-2891932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2889574-2889745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2886905-2887034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2884195-2884322:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2883107-2883269:-1:exon

FAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acyl-CoA reductase 2
translation: MSMISAFYNGKSILITGATGFLGKVMMEKLLRTSPDLKVIYILVRPKAGQTLQQRVFQILNSKLFEKVKEVCPKVHEKIRAISADLNQHDLAISKEDMQELLSHTNIIFHCAATVRFDDHLRHAVQLNVTATQQLLSIASQMPKLEAFIHISTAFANCNLKHIDEVIYPCAVEPKKIIDSMEWLDDAIIDEITPKLIGDRPNTYTYTKALGEMVLQQEGGNLNIAIIRPSIVGATWQEPFPGWIDSINGPTGLIVAAGKGFLRSIRATPMAVADLIPVDLVINLTLAVGWYTAVHRPKSTLIYHCTSGNLNPCHWGKMGFQVLATFEKIPFEKAFRRPNADFTTNNITTHYWNAVSHRVPAIIYDVYLRLTGRKPRMTKVMNRLLRTLSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPEARQHLKRLRNIHYLFNTALFLIAWRLLIARSQVARNVWFFIVSFCYKLLSYFRASSRLKV
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2883107..2883269,2884195..2884322,2886905..2887034,2889574..2889745,2891865..2891932,2892812..2892930,2894756..2894800,2896192..2896369,2905976..2906155,2909106..2909281,2922549..2922737))
location: region:2883107-2922737:-1
so has part: feature:2922549-2922737:-1:exon
so has part: feature:2909106-2909281:-1:exon
so has part: feature:2905976-2906155:-1:exon
so has part: feature:2896192-2896369:-1:exon
so has part: feature:2894756-2894800:-1:exon
so has part: feature:2892812-2892930:-1:exon
so has part: feature:2891865-2891932:-1:exon
so has part: feature:2889574-2889745:-1:exon
so has part: feature:2886905-2887034:-1:exon
so has part: feature:2884195-2884322:-1:exon
so has part: feature:2883107-2883269:-1:exon

XP_031299725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2922549-2922737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2909106-2909281:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2905976-2906155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2896192-2896369:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2894756-2894800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2892812-2892930:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2891865-2891932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2889574-2889745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2886905-2887034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2884195-2884322:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2883107-2883269:-1:exon

FAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acyl-CoA reductase 2
translation: MSMISAFYNGKSILITGATGFLGKVMMEKLLRTSPDLKVIYILVRPKAGQTLQQRVFQILNSKLFEKVKEVCPKVHEKIRAISADLNQHDLAISKEDMQELLSHTNIIFHCAATVRFDDHLRHAVQLNVTATQQLLSIASQMPKLEAFIHISTAFANCNLKHIDEVIYPCAVEPKKIIDSMEWLDDAIIDEITPKLIGDRPNTYTYTKALGEMVLQQEGGNLNIAIIRPSIVGATWQEPFPGWIDSINGPTGLIVAAGKGFLRSIRATPMAVADLIPVDLVINLTLAVGWYTAVHRPKSTLIYHCTSGNLNPCHWGKMGFQVLATFEKIPFEKAFRRPNADFTTNNITTHYWNAVSHRVPAIIYDVYLRLTGRKPRMTKVMNRLLRTLSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPEARQHLKRLRNIHYLFNTALFLIAWRLLIARSQVARNVWFFIVSFCYKLLSYFRASSRLKV
SIO_010081: FAR2
subclass of: SO_0000673
so part of: FAR2
location: complement(join(2883107..2883269,2884195..2884322,2886905..2887034,2889574..2889745,2891865..2891932,2892812..2892930,2894756..2894800,2896192..2896369,2905976..2906155,2909106..2909281,2922549..2922737))
location: region:2883107-2922737:-1
so has part: feature:2922549-2922737:-1:exon
so has part: feature:2909106-2909281:-1:exon
so has part: feature:2905976-2906155:-1:exon
so has part: feature:2896192-2896369:-1:exon
so has part: feature:2894756-2894800:-1:exon
so has part: feature:2892812-2892930:-1:exon
so has part: feature:2891865-2891932:-1:exon
so has part: feature:2889574-2889745:-1:exon
so has part: feature:2886905-2887034:-1:exon
so has part: feature:2884195-2884322:-1:exon
so has part: feature:2883107-2883269:-1:exon

XP_010995910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2922549-2922737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2909106-2909281:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2905976-2906155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2896192-2896369:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2894756-2894800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2892812-2892930:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2891865-2891932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2889574-2889745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2886905-2887034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2884195-2884322:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2883107-2883269:-1:exon

LOC116150407
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150407
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 3176383..3176478
location: region:3176383-3176478:1
so has part: feature:3176383-3176478:1:exon

116150407
type: Gene
SIO_000068: ncbigene

position:3176383:1
position: 3176383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3176478:1
position: 3176478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3176383-3176478:1:exon

LOC116150407
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116150407
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116150407
subclass of: SO_0000673
so part of: LOC116150407
location: 3176383..3176478
location: region:3176383-3176478:1
so has part: feature:3176383-3176478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3176383-3176478:1:exon

TRNAA-GGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAA-GGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3435334..3435405
location: region:3435334-3435405:1
so has part: feature:3435334-3435405:1:exon
subclass of: SO_0000663

116150443
type: Gene
SIO_000068: ncbigene

position:3435334:1
position: 3435334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3435405:1
position: 3435405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3435334-3435405:1:exon

TRNAA-GGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAA-GGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon GGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3435366..3435368,aa:Ala,seq:ggc)
SIO_010081: TRNAA-GGC
subclass of: SO_0000673
so part of: TRNAA-GGC
location: 3435334..3435405
location: region:3435334-3435405:1
so has part: feature:3435334-3435405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3435334-3435405:1:exon

CCDC91
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3447675..3690005)
location: region:3447675-3690005:-1
so has part: feature:3447675-3690005:-1:exon
subclass of: SO_0000010

105103938
type: Gene
SIO_000068: ncbigene

position:3447675:-1
position: 3447675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3690005:-1
position: 3690005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3447675-3690005:-1:exon

CCDC91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC91
product: coiled-coil domain containing 91, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_031443873.1
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3447675..3448772,3522397..3522573,3525532..3525600,3525686..3525778,3562343..3562450,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622460,3637217..3637295,3639495..3639540,3689809..3690005))
location: region:3447675-3690005:-1
so has part: feature:3689809-3690005:-1:exon
so has part: feature:3639495-3639540:-1:exon
so has part: feature:3637217-3637295:-1:exon
so has part: feature:3622300-3622460:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
so has part: feature:3562343-3562450:-1:exon
so has part: feature:3525686-3525778:-1:exon
so has part: feature:3525532-3525600:-1:exon
so has part: feature:3522397-3522573:-1:exon
so has part: feature:3447675-3448772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3689809-3690005:-1:exon

position:3689809:-1
position: 3689809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3639495-3639540:-1:exon

position:3639495:-1
position: 3639495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3639540:-1
position: 3639540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3637217-3637295:-1:exon

position:3637217:-1
position: 3637217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3637295:-1
position: 3637295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3622300-3622460:-1:exon

position:3622300:-1
position: 3622300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3622460:-1
position: 3622460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3620969-3621172:-1:exon

position:3620969:-1
position: 3620969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3621172:-1
position: 3621172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3619895-3619999:-1:exon

position:3619895:-1
position: 3619895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3619999:-1
position: 3619999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3580267-3580344:-1:exon

position:3580267:-1
position: 3580267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3580344:-1
position: 3580344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3562343-3562450:-1:exon

position:3562343:-1
position: 3562343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3562450:-1
position: 3562450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3525686-3525778:-1:exon

position:3525686:-1
position: 3525686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3525778:-1
position: 3525778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3525532-3525600:-1:exon

position:3525532:-1
position: 3525532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3525600:-1
position: 3525600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3522397-3522573:-1:exon

position:3522397:-1
position: 3522397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3522573:-1
position: 3522573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3447675-3448772:-1:exon

position:3448772:-1
position: 3448772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC91
product: coiled-coil domain containing 91, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_031443872.1
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3447675..3448772,3501165..3501278,3522397..3522573,3525532..3525600,3525686..3525778,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622460,3637217..3637295,3639495..3639540,3689809..3690002))
location: region:3447675-3690002:-1
so has part: feature:3689809-3690002:-1:exon
so has part: feature:3639495-3639540:-1:exon
so has part: feature:3637217-3637295:-1:exon
so has part: feature:3622300-3622460:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
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so has part: feature:3525532-3525600:-1:exon
so has part: feature:3522397-3522573:-1:exon
so has part: feature:3501165-3501278:-1:exon
so has part: feature:3447675-3448772:-1:exon

position:3690002:-1
position: 3690002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3689809-3690002:-1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:3525532-3525600:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3522397-3522573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3501165-3501278:-1:exon

position:3501165:-1
position: 3501165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3501278:-1
position: 3501278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3447675-3448772:-1:exon

CCDC91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC91
product: coiled-coil domain containing 91, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_031443867.1
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3447675..3448772,3501165..3501278,3522397..3522573,3525532..3525600,3525686..3525778,3562343..3562450,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622457,3637217..3637295,3639495..3639540,3689809..3690001))
location: region:3447675-3690001:-1
so has part: feature:3689809-3690001:-1:exon
so has part: feature:3639495-3639540:-1:exon
so has part: feature:3637217-3637295:-1:exon
so has part: feature:3622300-3622457:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
so has part: feature:3562343-3562450:-1:exon
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so has part: feature:3522397-3522573:-1:exon
so has part: feature:3501165-3501278:-1:exon
so has part: feature:3447675-3448772:-1:exon

position:3690001:-1
position: 3690001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3689809-3690001:-1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
SIO_000628: feature:3637217-3637295:-1:exon

urn:…
SIO_000300: 4
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position:3622457:-1
position: 3622457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:3501165-3501278:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3447675-3448772:-1:exon

CCDC91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC91
product: coiled-coil domain containing 91, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_031443866.1
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3447675..3448772,3501165..3501278,3522397..3522573,3525532..3525600,3525686..3525778,3562343..3562450,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622460,3637217..3637295,3639495..3639540,3689809..3690001))
location: region:3447675-3690001:-1
so has part: feature:3689809-3690001:-1:exon
so has part: feature:3639495-3639540:-1:exon
so has part: feature:3637217-3637295:-1:exon
so has part: feature:3622300-3622460:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
so has part: feature:3562343-3562450:-1:exon
so has part: feature:3525686-3525778:-1:exon
so has part: feature:3525532-3525600:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:3689809-3690001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3639495-3639540:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3637217-3637295:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:3620969-3621172:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:3580267-3580344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3562343-3562450:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3525686-3525778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3525532-3525600:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3522397-3522573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3501165-3501278:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3447675-3448772:-1:exon

CCDC91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC91
product: coiled-coil domain containing 91, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_031443871.1
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3447675..3448772,3501165..3501278,3522397..3522573,3525532..3525600,3525686..3525778,3562343..3562450,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622457,3623351..3623439,3637217..3637295,3639495..3639537))
location: region:3447675-3639537:-1
so has part: feature:3639495-3639537:-1:exon
so has part: feature:3637217-3637295:-1:exon
so has part: feature:3623351-3623439:-1:exon
so has part: feature:3622300-3622457:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
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so has part: feature:3562343-3562450:-1:exon
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so has part: feature:3525532-3525600:-1:exon
so has part: feature:3522397-3522573:-1:exon
so has part: feature:3501165-3501278:-1:exon
so has part: feature:3447675-3448772:-1:exon

position:3639537:-1
position: 3639537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3639495-3639537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3637217-3637295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3623351-3623439:-1:exon

position:3623351:-1
position: 3623351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3623439:-1
position: 3623439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3622300-3622457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3620969-3621172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3619895-3619999:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3580267-3580344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3562343-3562450:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3525686-3525778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3525532-3525600:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3522397-3522573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3501165-3501278:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3447675-3448772:-1:exon

CCDC91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC91
product: coiled-coil domain containing 91, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_031443870.1
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3447675..3448772,3501165..3501278,3522397..3522573,3525532..3525600,3525686..3525778,3562343..3562450,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622460,3623351..3623439,3637217..3637295,3639495..3639537))
location: region:3447675-3639537:-1
so has part: feature:3639495-3639537:-1:exon
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so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
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so has part: feature:3522397-3522573:-1:exon
so has part: feature:3501165-3501278:-1:exon
so has part: feature:3447675-3448772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3639495-3639537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3637217-3637295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3623351-3623439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3622300-3622460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3620969-3621172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3619895-3619999:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3580267-3580344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3562343-3562450:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3525686-3525778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3525532-3525600:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3522397-3522573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3501165-3501278:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3447675-3448772:-1:exon

CCDC91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 91 isoform X2
translation: MDDDDFGGFEAAEIFDGGNGETQTTSPAIPWAAFPTAGVHLSPASPEIVLDHDHTSPSVGCLSSEPIISSPENTHADNSIVGQTVPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIAPVGDAEDPGANVSNIQLQQKIASLEMKLKVSEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAVEKQAHKCEELLNTQHQRLLEMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAMTEAVLKAIEEERKHLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYVKEQKRLDQVIRQRSLSSLELFLSCAQKQLSALIATEPAGLE
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3448662..3448772,3501165..3501278,3522397..3522573,3525532..3525600,3525686..3525778,3562343..3562450,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622457,3637217..3637295,3639495..3639524))
location: region:3448662-3639524:-1
so has part: feature:3639495-3639524:-1:exon
so has part: feature:3637217-3637295:-1:exon
so has part: feature:3622300-3622457:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
so has part: feature:3562343-3562450:-1:exon
so has part: feature:3525686-3525778:-1:exon
so has part: feature:3525532-3525600:-1:exon
so has part: feature:3522397-3522573:-1:exon
so has part: feature:3501165-3501278:-1:exon
so has part: feature:3448662-3448772:-1:exon

XP_031299727.1
type: Protein
SIO_000068: ncbiprotein

position:3448662:-1
position: 3448662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3639524:-1
position: 3639524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3639495-3639524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3637217-3637295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3622300-3622457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3620969-3621172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3619895-3619999:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3580267-3580344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3562343-3562450:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3525686-3525778:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3525532-3525600:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3522397-3522573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3501165-3501278:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3448662-3448772:-1:exon

CCDC91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 91 isoform X7
translation: MDDDDFGGFEAAEIFDGGNGETQTTSPAIPWAAFPTVAGVHLSPASPEIVLDHDHTSPSVGCLSSEPIISSPENTHADNSIVGQTVPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIAPVGDAEDPGANVSNIQLQQKIASLEMKLKVSEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKHQRLLEMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAMTEAVLKAIEEERKHLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYVKEQKRLDQVIRQRSLSSLELFLSCAQKQLSALIATEPAGLE
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3448662..3448772,3501165..3501278,3522397..3522573,3525532..3525600,3525686..3525778,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622460,3637217..3637295,3639495..3639524))
location: region:3448662-3639524:-1
so has part: feature:3639495-3639524:-1:exon
so has part: feature:3637217-3637295:-1:exon
so has part: feature:3622300-3622460:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
so has part: feature:3525686-3525778:-1:exon
so has part: feature:3525532-3525600:-1:exon
so has part: feature:3522397-3522573:-1:exon
so has part: feature:3501165-3501278:-1:exon
so has part: feature:3448662-3448772:-1:exon

XP_031299732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3639495-3639524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3637217-3637295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3622300-3622460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3620969-3621172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3619895-3619999:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3580267-3580344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3525686-3525778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3525532-3525600:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3522397-3522573:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3501165-3501278:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3448662-3448772:-1:exon

CCDC91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 91 isoform X8
translation: MDDDDFGGFEAAEIFDGGNGETQTTSPAIPWAAFPTVAGVHLSPASPEIVLDHDHTSPSVGCLSSEPIISSPENTHADNSIVGQTVPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIAPVGDAEDPGANVSNIQLQQKIASLEMKLKVSEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAVEKQAHKCEELLNTQHQRLLEMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAMTEAVLKAIEEERKHLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQLDQVIRQRSLSSLELFLSCAQKQLSALIATEPAGLE
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3448662..3448772,3522397..3522573,3525532..3525600,3525686..3525778,3562343..3562450,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622460,3637217..3637295,3639495..3639524))
location: region:3448662-3639524:-1
so has part: feature:3639495-3639524:-1:exon
so has part: feature:3637217-3637295:-1:exon
so has part: feature:3622300-3622460:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
so has part: feature:3562343-3562450:-1:exon
so has part: feature:3525686-3525778:-1:exon
so has part: feature:3525532-3525600:-1:exon
so has part: feature:3522397-3522573:-1:exon
so has part: feature:3448662-3448772:-1:exon

XP_031299733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3639495-3639524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3637217-3637295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3622300-3622460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3620969-3621172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3619895-3619999:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3580267-3580344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3562343-3562450:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3525686-3525778:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3525532-3525600:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3522397-3522573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3448662-3448772:-1:exon

CCDC91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 91 isoform X1
translation: MDDDDFGGFEAAEIFDGGNGETQTTSPAIPWAAFPTVAGVHLSPASPEIVLDHDHTSPSVGCLSSEPIISSPENTHADNSIVGQTVPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIAPVGDAEDPGANVSNIQLQQKIASLEMKLKVSEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAVEKQAHKCEELLNTQHQRLLEMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAMTEAVLKAIEEERKHLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYVKEQKRLDQVIRQRSLSSLELFLSCAQKQLSALIATEPAGLE
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3448662..3448772,3501165..3501278,3522397..3522573,3525532..3525600,3525686..3525778,3562343..3562450,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622460,3637217..3637295,3639495..3639524))
location: region:3448662-3639524:-1
so has part: feature:3639495-3639524:-1:exon
so has part: feature:3637217-3637295:-1:exon
so has part: feature:3622300-3622460:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
so has part: feature:3562343-3562450:-1:exon
so has part: feature:3525686-3525778:-1:exon
so has part: feature:3525532-3525600:-1:exon
so has part: feature:3522397-3522573:-1:exon
so has part: feature:3501165-3501278:-1:exon
so has part: feature:3448662-3448772:-1:exon

XP_031299726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3639495-3639524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3637217-3637295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3622300-3622460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3620969-3621172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3619895-3619999:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3580267-3580344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3562343-3562450:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3525686-3525778:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3525532-3525600:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3522397-3522573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3501165-3501278:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3448662-3448772:-1:exon

CCDC91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 91 isoform X6
translation: MPKWNKAGVHLSPASPEIVLDHDHTSPSVGCLSSEPIISSPENTHADNSIVGQTVPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIAPVGDAEDPGANVSNIQLQQKIASLEMKLKVSEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAVEKQAHKCEELLNTQHQRLLEMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAMTEAVLKAIEEERKHLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYVKEQKRLDQVIRQRSLSSLELFLSCAQKQLSALIATEPAGLE
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3448662..3448772,3501165..3501278,3522397..3522573,3525532..3525600,3525686..3525778,3562343..3562450,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622457,3623351..3623369))
location: region:3448662-3623369:-1
so has part: feature:3623351-3623369:-1:exon
so has part: feature:3622300-3622457:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
so has part: feature:3562343-3562450:-1:exon
so has part: feature:3525686-3525778:-1:exon
so has part: feature:3525532-3525600:-1:exon
so has part: feature:3522397-3522573:-1:exon
so has part: feature:3501165-3501278:-1:exon
so has part: feature:3448662-3448772:-1:exon

XP_031299731.1
type: Protein
SIO_000068: ncbiprotein

position:3623369:-1
position: 3623369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3623351-3623369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3622300-3622457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3620969-3621172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3619895-3619999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3580267-3580344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3562343-3562450:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3525686-3525778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3525532-3525600:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3522397-3522573:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3501165-3501278:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3448662-3448772:-1:exon

CCDC91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 91 isoform X5
translation: MPKWNKVAGVHLSPASPEIVLDHDHTSPSVGCLSSEPIISSPENTHADNSIVGQTVPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIAPVGDAEDPGANVSNIQLQQKIASLEMKLKVSEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAVEKQAHKCEELLNTQHQRLLEMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAMTEAVLKAIEEERKHLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYVKEQKRLDQVIRQRSLSSLELFLSCAQKQLSALIATEPAGLE
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3448662..3448772,3501165..3501278,3522397..3522573,3525532..3525600,3525686..3525778,3562343..3562450,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622460,3623351..3623369))
location: region:3448662-3623369:-1
so has part: feature:3623351-3623369:-1:exon
so has part: feature:3622300-3622460:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
so has part: feature:3562343-3562450:-1:exon
so has part: feature:3525686-3525778:-1:exon
so has part: feature:3525532-3525600:-1:exon
so has part: feature:3522397-3522573:-1:exon
so has part: feature:3501165-3501278:-1:exon
so has part: feature:3448662-3448772:-1:exon

XP_031299730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3623351-3623369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3622300-3622460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3620969-3621172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3619895-3619999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3580267-3580344:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3562343-3562450:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3525686-3525778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3525532-3525600:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3522397-3522573:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3501165-3501278:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3448662-3448772:-1:exon

CCDC91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC91
product: coiled-coil domain containing 91, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031443868.1
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3467366..3467476,3501165..3501278,3522397..3522573,3525532..3525600,3525686..3525778,3562343..3562450,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622460,3637217..3637295,3639495..3639540,3689809..3690004))
location: region:3467366-3690004:-1
so has part: feature:3689809-3690004:-1:exon
so has part: feature:3639495-3639540:-1:exon
so has part: feature:3637217-3637295:-1:exon
so has part: feature:3622300-3622460:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
so has part: feature:3562343-3562450:-1:exon
so has part: feature:3525686-3525778:-1:exon
so has part: feature:3525532-3525600:-1:exon
so has part: feature:3522397-3522573:-1:exon
so has part: feature:3501165-3501278:-1:exon
so has part: feature:3467366-3467476:-1:exon

position:3467366:-1
position: 3467366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3690004:-1
position: 3690004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3689809-3690004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3639495-3639540:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3637217-3637295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3622300-3622460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3620969-3621172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3619895-3619999:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3580267-3580344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3562343-3562450:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3525686-3525778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3525532-3525600:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3522397-3522573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3501165-3501278:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3467366-3467476:-1:exon

position:3467476:-1
position: 3467476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 91 isoform X3
translation: MDDDDFGGFEAAEIFDGGNGETQTTSPAIPWAAFPTVAGVHLSPASPEIVLDHDHTSPSVGCLSSEPIISSPENTHADNSIVGQTVPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIAPVGDAEDPGANVSNIQLQQKIASLEMKLKVSEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAVEKQAHKCEELLNTQHQRLLEMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAMTEAVLKAIEEERKHLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYVKEQKRNARQSVMQTSLDMWTMNLSEPLFCYYPHAFR
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3467381..3467476,3501165..3501278,3522397..3522573,3525532..3525600,3525686..3525778,3562343..3562450,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622460,3637217..3637295,3639495..3639524))
location: region:3467381-3639524:-1
so has part: feature:3639495-3639524:-1:exon
so has part: feature:3637217-3637295:-1:exon
so has part: feature:3622300-3622460:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
so has part: feature:3562343-3562450:-1:exon
so has part: feature:3525686-3525778:-1:exon
so has part: feature:3525532-3525600:-1:exon
so has part: feature:3522397-3522573:-1:exon
so has part: feature:3501165-3501278:-1:exon
so has part: feature:3467381-3467476:-1:exon

XP_031299728.1
type: Protein
SIO_000068: ncbiprotein

position:3467381:-1
position: 3467381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3639495-3639524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3637217-3637295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3622300-3622460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3620969-3621172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3619895-3619999:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3580267-3580344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3562343-3562450:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3525686-3525778:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3525532-3525600:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3522397-3522573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3501165-3501278:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3467381-3467476:-1:exon

CCDC91
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC91
product: coiled-coil domain containing 91, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031443869.1
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3478375..3478488,3501165..3501278,3522397..3522573,3525532..3525600,3525686..3525778,3562343..3562450,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622460,3637217..3637295,3639495..3639540,3689809..3690004))
location: region:3478375-3690004:-1
so has part: feature:3689809-3690004:-1:exon
so has part: feature:3639495-3639540:-1:exon
so has part: feature:3637217-3637295:-1:exon
so has part: feature:3622300-3622460:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
so has part: feature:3562343-3562450:-1:exon
so has part: feature:3525686-3525778:-1:exon
so has part: feature:3525532-3525600:-1:exon
so has part: feature:3522397-3522573:-1:exon
so has part: feature:3501165-3501278:-1:exon
so has part: feature:3478375-3478488:-1:exon

position:3478375:-1
position: 3478375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3689809-3690004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3639495-3639540:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3637217-3637295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3622300-3622460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3620969-3621172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3619895-3619999:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3580267-3580344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3562343-3562450:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3525686-3525778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3525532-3525600:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3522397-3522573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3501165-3501278:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3478375-3478488:-1:exon

position:3478488:-1
position: 3478488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC91
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC91
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 91 isoform X4
translation: MDDDDFGGFEAAEIFDGGNGETQTTSPAIPWAAFPTVAGVHLSPASPEIVLDHDHTSPSVGCLSSEPIISSPENTHADNSIVGQTVPKAQIQQSTHTHLDISLFPLGLTDEKSNGTIAPVGDAEDPGANVSNIQLQQKIASLEMKLKVSEEEKQRIKKDVESLMEKHSVLEKDFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAVEKQAHKCEELLNTQHQRLLEMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAMTEAVLKAIEEERKHLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYVKEQKRRHTVTPLLHSCLQP
SIO_010081: CCDC91
subclass of: SO_0000673
so part of: CCDC91
location: complement(join(3478444..3478488,3501165..3501278,3522397..3522573,3525532..3525600,3525686..3525778,3562343..3562450,3580267..3580344,3619895..3619999,3620969..3621172,3622300..3622460,3637217..3637295,3639495..3639524))
location: region:3478444-3639524:-1
so has part: feature:3639495-3639524:-1:exon
so has part: feature:3637217-3637295:-1:exon
so has part: feature:3622300-3622460:-1:exon
so has part: feature:3620969-3621172:-1:exon
so has part: feature:3619895-3619999:-1:exon
so has part: feature:3580267-3580344:-1:exon
so has part: feature:3562343-3562450:-1:exon
so has part: feature:3525686-3525778:-1:exon
so has part: feature:3525532-3525600:-1:exon
so has part: feature:3522397-3522573:-1:exon
so has part: feature:3501165-3501278:-1:exon
so has part: feature:3478444-3478488:-1:exon

XP_031299729.1
type: Protein
SIO_000068: ncbiprotein

position:3478444:-1
position: 3478444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3639495-3639524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3637217-3637295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3622300-3622460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3620969-3621172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3619895-3619999:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3580267-3580344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3562343-3562450:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3525686-3525778:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3525532-3525600:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3522397-3522573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3501165-3501278:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3478444-3478488:-1:exon

PTHLH
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: PTHLH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3941614..3955687
location: region:3941614-3955687:1
so has part: feature:3941614-3955687:1:exon
subclass of: SO_0000010

105103937
type: Gene
SIO_000068: ncbigene

position:3941614:1
position: 3941614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3955687:1
position: 3955687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3941614-3955687:1:exon

PTHLH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PTHLH
product: parathyroid hormone like hormone, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031443877.1
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3941614..3941779,3944751..3944873,3950678..3951100,3955209..3955687)
location: region:3941614-3955687:1
so has part: feature:3941614-3941779:1:exon
so has part: feature:3944751-3944873:1:exon
so has part: feature:3950678-3951100:1:exon
so has part: feature:3955209-3955687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3941614-3941779:1:exon

position:3941779:1
position: 3941779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3944751-3944873:1:exon

position:3944751:1
position: 3944751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3944873:1
position: 3944873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3950678-3951100:1:exon

position:3950678:1
position: 3950678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3951100:1
position: 3951100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3955209-3955687:1:exon

position:3955209:1
position: 3955209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTHLH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PTHLH
product: parathyroid hormone like hormone, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031443878.1
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3943976..3944231,3944751..3944873,3950678..3951124,3955209..3955629)
location: region:3943976-3955629:1
so has part: feature:3943976-3944231:1:exon
so has part: feature:3944751-3944873:1:exon
so has part: feature:3950678-3951124:1:exon
so has part: feature:3955209-3955629:1:exon

position:3943976:1
position: 3943976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3955629:1
position: 3955629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943976-3944231:1:exon

position:3944231:1
position: 3944231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3944751-3944873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3950678-3951124:1:exon

position:3951124:1
position: 3951124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3955209-3955629:1:exon

PTHLH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PTHLH
product: parathyroid hormone like hormone, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031443875.1
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3943979..3944231,3944550..3944578,3944751..3944873,3950678..3951100,3955209..3955687)
location: region:3943979-3955687:1
so has part: feature:3943979-3944231:1:exon
so has part: feature:3944550-3944578:1:exon
so has part: feature:3944751-3944873:1:exon
so has part: feature:3950678-3951100:1:exon
so has part: feature:3955209-3955687:1:exon

position:3943979:1
position: 3943979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943979-3944231:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3944550-3944578:1:exon

position:3944550:1
position: 3944550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3944578:1
position: 3944578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3944751-3944873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3950678-3951100:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3955209-3955687:1:exon

PTHLH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PTHLH
product: parathyroid hormone like hormone, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031443874.1
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3944098..3944231,3944751..3944873,3950678..3951100,3955209..3955687)
location: region:3944098-3955687:1
so has part: feature:3944098-3944231:1:exon
so has part: feature:3944751-3944873:1:exon
so has part: feature:3950678-3951100:1:exon
so has part: feature:3955209-3955687:1:exon

position:3944098:1
position: 3944098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3944098-3944231:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3944751-3944873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3950678-3951100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3955209-3955687:1:exon

PTHLH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PTHLH
product: parathyroid hormone like hormone, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031443876.1
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3944280..3944453,3944751..3944873,3950678..3951100,3955209..3955687)
location: region:3944280-3955687:1
so has part: feature:3944280-3944453:1:exon
so has part: feature:3944751-3944873:1:exon
so has part: feature:3950678-3951100:1:exon
so has part: feature:3955209-3955687:1:exon

position:3944280:1
position: 3944280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3944280-3944453:1:exon

position:3944453:1
position: 3944453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3944751-3944873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3950678-3951100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3955209-3955687:1:exon

PTHLH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PTHLH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parathyroid hormone-related protein isoform X1
translation: MLWRLVQQWSVAVFLLSYSVPSCGRSVEELGRRLKRAVSEHQLLHDKGKSIQDLRRRFFLHHLIAEIHTAEIRATSEVSPNSKPAPNTKNHPVRFGSDDEGRYLTQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLTSGVAGSGLEGDHVSDISGTSLELDSRRH
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3944773..3944873,3950678..3951100,3955209..3955218)
location: region:3944773-3955218:1
so has part: feature:3944773-3944873:1:exon
so has part: feature:3950678-3951100:1:exon
so has part: feature:3955209-3955218:1:exon

XP_031299734.1
type: Protein
SIO_000068: ncbiprotein

position:3944773:1
position: 3944773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3955218:1
position: 3955218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3944773-3944873:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3950678-3951100:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3955209-3955218:1:exon

PTHLH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PTHLH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parathyroid hormone-related protein isoform X1
translation: MLWRLVQQWSVAVFLLSYSVPSCGRSVEELGRRLKRAVSEHQLLHDKGKSIQDLRRRFFLHHLIAEIHTAEIRATSEVSPNSKPAPNTKNHPVRFGSDDEGRYLTQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLTSGVAGSGLEGDHVSDISGTSLELDSRRH
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3944773..3944873,3950678..3951100,3955209..3955218)
location: region:3944773-3955218:1
so has part: feature:3944773-3944873:1:exon
so has part: feature:3950678-3951100:1:exon
so has part: feature:3955209-3955218:1:exon

XP_031299735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3944773-3944873:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3950678-3951100:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3955209-3955218:1:exon

PTHLH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PTHLH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parathyroid hormone-related protein isoform X1
translation: MLWRLVQQWSVAVFLLSYSVPSCGRSVEELGRRLKRAVSEHQLLHDKGKSIQDLRRRFFLHHLIAEIHTAEIRATSEVSPNSKPAPNTKNHPVRFGSDDEGRYLTQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLTSGVAGSGLEGDHVSDISGTSLELDSRRH
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3944773..3944873,3950678..3951100,3955209..3955218)
location: region:3944773-3955218:1
so has part: feature:3944773-3944873:1:exon
so has part: feature:3950678-3951100:1:exon
so has part: feature:3955209-3955218:1:exon

XP_031299736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3944773-3944873:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3950678-3951100:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3955209-3955218:1:exon

PTHLH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PTHLH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parathyroid hormone-related protein isoform X1
translation: MLWRLVQQWSVAVFLLSYSVPSCGRSVEELGRRLKRAVSEHQLLHDKGKSIQDLRRRFFLHHLIAEIHTAEIRATSEVSPNSKPAPNTKNHPVRFGSDDEGRYLTQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLTSGVAGSGLEGDHVSDISGTSLELDSRRH
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3944773..3944873,3950678..3951100,3955209..3955218)
location: region:3944773-3955218:1
so has part: feature:3944773-3944873:1:exon
so has part: feature:3950678-3951100:1:exon
so has part: feature:3955209-3955218:1:exon

XP_031299737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3944773-3944873:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3950678-3951100:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3955209-3955218:1:exon

PTHLH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PTHLH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parathyroid hormone-related protein isoform X2
translation: MLWRLVQQWSVAVFLLSYSVPSCGRSVEELGRRLKRAVSEHQLLHDKGKSIQDLRRRFFLHHLIAEIHTAEIRATSEVSPNSKPAPNTKNHPVRFGSDDEGRYLTQETNKVETYKEQPLKTPGKKKKGKPGKRKEQEKKKRRTRSAWLTSGVAGSGLEGDHVSDISGTSLELDSR
SIO_010081: PTHLH
subclass of: SO_0000673
so part of: PTHLH
location: join(3944773..3944873,3950678..3951104)
location: region:3944773-3951104:1
so has part: feature:3944773-3944873:1:exon
so has part: feature:3950678-3951104:1:exon

XP_031299738.1
type: Protein
SIO_000068: ncbiprotein

position:3951104:1
position: 3951104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3944773-3944873:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3950678-3951104:1:exon

LOC105103936
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105103936
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3951131..3955215)
location: region:3951131-3955215:-1
so has part: feature:3951131-3955215:-1:exon
subclass of: SO_0000011

105103936
type: Gene
SIO_000068: ncbigene

position:3951131:-1
position: 3951131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3955215:-1
position: 3955215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3951131-3955215:-1:exon

LOC105103936
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105103936
product: uncharacterized LOC105103936
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_838532.2
SIO_010081: LOC105103936
subclass of: SO_0000673
so part of: LOC105103936
location: complement(join(3951131..3952207,3952302..3952437,3955079..3955215))
location: region:3951131-3955215:-1
so has part: feature:3955079-3955215:-1:exon
so has part: feature:3952302-3952437:-1:exon
so has part: feature:3951131-3952207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3955079-3955215:-1:exon

position:3955079:-1
position: 3955079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3952302-3952437:-1:exon

position:3952302:-1
position: 3952302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3952437:-1
position: 3952437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3951131-3952207:-1:exon

position:3952207:-1
position: 3952207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAG-ACC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAG-ACC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3991865..3991936)
location: region:3991865-3991936:-1
so has part: feature:3991865-3991936:-1:exon
subclass of: SO_0000663

116150434
type: Gene
SIO_000068: ncbigene

position:3991865:-1
position: 3991865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3991936:-1
position: 3991936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3991865-3991936:-1:exon

TRNAG-ACC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAG-ACC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon ACC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3991902..3991904),aa:Gly, seq:acc)
SIO_010081: TRNAG-ACC
subclass of: SO_0000673
so part of: TRNAG-ACC
location: complement(3991865..3991936)
location: region:3991865-3991936:-1
so has part: feature:3991865-3991936:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3991865-3991936:-1:exon

LOC105103526
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105103526
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3994283..4050118)
location: region:3994283-4050118:-1
so has part: feature:3994283-4050118:-1:exon
subclass of: SO_0000011

105103526
type: Gene
SIO_000068: ncbigene

position:3994283:-1
position: 3994283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4050118:-1
position: 4050118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3994283-4050118:-1:exon

LOC105103526
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105103526
product: uncharacterized LOC105103526, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004134013.1
SIO_010081: LOC105103526
subclass of: SO_0000673
so part of: LOC105103526
location: complement(join(3994283..3994441,4023996..4024104,4049910..4050118))
location: region:3994283-4050118:-1
so has part: feature:4049910-4050118:-1:exon
so has part: feature:4023996-4024104:-1:exon
so has part: feature:3994283-3994441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4049910-4050118:-1:exon

position:4049910:-1
position: 4049910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4023996-4024104:-1:exon

position:4023996:-1
position: 4023996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4024104:-1
position: 4024104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3994283-3994441:-1:exon

position:3994441:-1
position: 3994441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105103526
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105103526
product: uncharacterized LOC105103526, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004134014.1
SIO_010081: LOC105103526
subclass of: SO_0000673
so part of: LOC105103526
location: complement(join(3994283..3994441,4023996..4024104,4026512..4026652,4049910..4050118))
location: region:3994283-4050118:-1
so has part: feature:4049910-4050118:-1:exon
so has part: feature:4026512-4026652:-1:exon
so has part: feature:4023996-4024104:-1:exon
so has part: feature:3994283-3994441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4049910-4050118:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4026512-4026652:-1:exon

position:4026512:-1
position: 4026512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4026652:-1
position: 4026652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4023996-4024104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3994283-3994441:-1:exon

KLHL42
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: KLHL42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4060333..4079964)
location: region:4060333-4079964:-1
so has part: feature:4060333-4079964:-1:exon
subclass of: SO_0000010

116150325
type: Gene
SIO_000068: ncbigene

position:4060333:-1
position: 4060333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4079964:-1
position: 4079964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4060333-4079964:-1:exon

KLHL42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: KLHL42
product: kelch like family member 42
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_031443879.1
SIO_010081: KLHL42
subclass of: SO_0000673
so part of: KLHL42
location: complement(join(4060333..4065701,4069889..4070082,4079072..4079964))
location: region:4060333-4079964:-1
so has part: feature:4079072-4079964:-1:exon
so has part: feature:4069889-4070082:-1:exon
so has part: feature:4060333-4065701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4079072-4079964:-1:exon

position:4079072:-1
position: 4079072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4069889-4070082:-1:exon

position:4069889:-1
position: 4069889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4070082:-1
position: 4070082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4060333-4065701:-1:exon

position:4065701:-1
position: 4065701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHL42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: KLHL42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 42
translation: MSAEEMVQIRLEDRCYPVSKRKLIEQSDYFRALYRSGMREALSPEAGGPEVQQLRASVAGLAPVLDFINAGGAREGWLLGPRRGQGGGLEEEEDDMDEVSLLSELVEAASFLQVTSLLQLLLSQVRLSNCMELYRLAQVYGLPDLQEACLRFMAVHFHEVLCKPQFHLLGSSPQAPGDVNLKQSLREARMTGTPVLVALGDFLGGPLAPHPYQGEPPSMLRYEEMTERWFPLANNLPPDLVNVRGYGSAILDNYLFIVGGYRITSQEISAAHSYNPSTNEWLQVASMNQKRSNFKLVAVNSKLYAIGGQAVSNVECYNPEQDAWNFVAPLPNPLAEFSACECKGKIYVIGGYTTRDRNMSILQYCPSADLWTLFETCAVHIRKQQMVSVEETIYIVGGCLHELGPGRRGGQSEDTLAVQSYNTATRRWLCLKENTSKSGLNLTCALHNDGIYIMSRDVTLSTSLEHRVFLKYNIFSDSWEAFRRFPAFGHNLLVSSLYLPKKAET
SIO_010081: KLHL42
subclass of: SO_0000673
so part of: KLHL42
location: complement(join(4065250..4065701,4069889..4070082,4079072..4079943))
location: region:4065250-4079943:-1
so has part: feature:4079072-4079943:-1:exon
so has part: feature:4069889-4070082:-1:exon
so has part: feature:4065250-4065701:-1:exon

XP_031299739.1
type: Protein
SIO_000068: ncbiprotein

position:4065250:-1
position: 4065250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4079943:-1
position: 4079943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4079072-4079943:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4069889-4070082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4065250-4065701:-1:exon

MANSC4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: MANSC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4078660..4093194
location: region:4078660-4093194:1
so has part: feature:4078660-4093194:1:exon
subclass of: SO_0000010

105103524
type: Gene
SIO_000068: ncbigene

position:4078660:1
position: 4078660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4093194:1
position: 4093194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4078660-4093194:1:exon

MANSC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MANSC4
product: MANSC domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_031443882.1
SIO_010081: MANSC4
subclass of: SO_0000673
so part of: MANSC4
location: join(4078660..4079032,4084552..4084601,4085914..4086463,4089215..4089349,4091735..4093194)
location: region:4078660-4093194:1
so has part: feature:4078660-4079032:1:exon
so has part: feature:4084552-4084601:1:exon
so has part: feature:4085914-4086463:1:exon
so has part: feature:4089215-4089349:1:exon
so has part: feature:4091735-4093194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4078660-4079032:1:exon

position:4079032:1
position: 4079032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4084552-4084601:1:exon

position:4084552:1
position: 4084552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4084601:1
position: 4084601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4085914-4086463:1:exon

position:4085914:1
position: 4085914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4086463:1
position: 4086463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4089215-4089349:1:exon

position:4089215:1
position: 4089215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4089349:1
position: 4089349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4091735-4093194:1:exon

position:4091735:1
position: 4091735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MANSC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MANSC4
product: MANSC domain containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031443883.1
SIO_010081: MANSC4
subclass of: SO_0000673
so part of: MANSC4
location: join(4080561..4080684,4084552..4084601,4085914..4086463,4089215..4089349,4091735..4093194)
location: region:4080561-4093194:1
so has part: feature:4080561-4080684:1:exon
so has part: feature:4084552-4084601:1:exon
so has part: feature:4085914-4086463:1:exon
so has part: feature:4089215-4089349:1:exon
so has part: feature:4091735-4093194:1:exon

position:4080561:1
position: 4080561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4080561-4080684:1:exon

position:4080684:1
position: 4080684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4084552-4084601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4085914-4086463:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4089215-4089349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4091735-4093194:1:exon

MANSC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MANSC4
product: MANSC domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_031443881.1
SIO_010081: MANSC4
subclass of: SO_0000673
so part of: MANSC4
location: join(4080588..4080725,4084552..4084601,4085914..4086463,4089215..4089349,4091735..4093194)
location: region:4080588-4093194:1
so has part: feature:4080588-4080725:1:exon
so has part: feature:4084552-4084601:1:exon
so has part: feature:4085914-4086463:1:exon
so has part: feature:4089215-4089349:1:exon
so has part: feature:4091735-4093194:1:exon

position:4080588:1
position: 4080588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4080588-4080725:1:exon

position:4080725:1
position: 4080725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4084552-4084601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4085914-4086463:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4089215-4089349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4091735-4093194:1:exon

MANSC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MANSC4
product: MANSC domain containing 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010997124.2
SIO_010081: MANSC4
subclass of: SO_0000673
so part of: MANSC4
location: join(4082924..4084427,4084552..4084601,4085914..4086463,4089215..4089349,4091735..4093194)
location: region:4082924-4093194:1
so has part: feature:4082924-4084427:1:exon
so has part: feature:4084552-4084601:1:exon
so has part: feature:4085914-4086463:1:exon
so has part: feature:4089215-4089349:1:exon
so has part: feature:4091735-4093194:1:exon

position:4082924:1
position: 4082924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4082924-4084427:1:exon

position:4084427:1
position: 4084427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4084552-4084601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4085914-4086463:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4089215-4089349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4091735-4093194:1:exon

MANSC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MANSC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MANSC domain-containing protein 4
translation: MHMAVVAAGVVLLLSMGSTSEALCSPNIFYRGCWIRRFPGLLIDLEESQKLGAQFLKYYSESTGQKCSRSCCLRKDVSCNLAVFFHDPIHDNVNCLHVHCPTLDSCILEPGTSAILYNITDGIDPDLLVFEQSLPTYLNTRSSSNTWERLRILKTMNLDKQQATEIHQMLPSMEAPSSTTRQDLVANTTTTRYSNELTTDSWARFISLNDATTAKVNVVSPSTEFIGNPDNKTVSPFFVPIDTKLSHMPIPSRLNSSKQLLNKTKGYSSRNQTAESEDPAADGAPGTSATWLVPVALGTSVVFLCCCVVILVSGFCRRRQGQYKPGQRKSGSRQIKKCTILKERS
SIO_010081: MANSC4
subclass of: SO_0000673
so part of: MANSC4
location: join(4086235..4086463,4089215..4089349,4091735..4092408)
location: region:4086235-4092408:1
so has part: feature:4086235-4086463:1:exon
so has part: feature:4089215-4089349:1:exon
so has part: feature:4091735-4092408:1:exon

XP_031299741.1
type: Protein
SIO_000068: ncbiprotein

position:4086235:1
position: 4086235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4092408:1
position: 4092408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4086235-4086463:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4089215-4089349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4091735-4092408:1:exon

MANSC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MANSC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MANSC domain-containing protein 4
translation: MHMAVVAAGVVLLLSMGSTSEALCSPNIFYRGCWIRRFPGLLIDLEESQKLGAQFLKYYSESTGQKCSRSCCLRKDVSCNLAVFFHDPIHDNVNCLHVHCPTLDSCILEPGTSAILYNITDGIDPDLLVFEQSLPTYLNTRSSSNTWERLRILKTMNLDKQQATEIHQMLPSMEAPSSTTRQDLVANTTTTRYSNELTTDSWARFISLNDATTAKVNVVSPSTEFIGNPDNKTVSPFFVPIDTKLSHMPIPSRLNSSKQLLNKTKGYSSRNQTAESEDPAADGAPGTSATWLVPVALGTSVVFLCCCVVILVSGFCRRRQGQYKPGQRKSGSRQIKKCTILKERS
SIO_010081: MANSC4
subclass of: SO_0000673
so part of: MANSC4
location: join(4086235..4086463,4089215..4089349,4091735..4092408)
location: region:4086235-4092408:1
so has part: feature:4086235-4086463:1:exon
so has part: feature:4089215-4089349:1:exon
so has part: feature:4091735-4092408:1:exon

XP_031299742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4086235-4086463:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4089215-4089349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4091735-4092408:1:exon

MANSC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MANSC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MANSC domain-containing protein 4
translation: MHMAVVAAGVVLLLSMGSTSEALCSPNIFYRGCWIRRFPGLLIDLEESQKLGAQFLKYYSESTGQKCSRSCCLRKDVSCNLAVFFHDPIHDNVNCLHVHCPTLDSCILEPGTSAILYNITDGIDPDLLVFEQSLPTYLNTRSSSNTWERLRILKTMNLDKQQATEIHQMLPSMEAPSSTTRQDLVANTTTTRYSNELTTDSWARFISLNDATTAKVNVVSPSTEFIGNPDNKTVSPFFVPIDTKLSHMPIPSRLNSSKQLLNKTKGYSSRNQTAESEDPAADGAPGTSATWLVPVALGTSVVFLCCCVVILVSGFCRRRQGQYKPGQRKSGSRQIKKCTILKERS
SIO_010081: MANSC4
subclass of: SO_0000673
so part of: MANSC4
location: join(4086235..4086463,4089215..4089349,4091735..4092408)
location: region:4086235-4092408:1
so has part: feature:4086235-4086463:1:exon
so has part: feature:4089215-4089349:1:exon
so has part: feature:4091735-4092408:1:exon

XP_031299743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4086235-4086463:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4089215-4089349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4091735-4092408:1:exon

MANSC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MANSC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MANSC domain-containing protein 4
translation: MHMAVVAAGVVLLLSMGSTSEALCSPNIFYRGCWIRRFPGLLIDLEESQKLGAQFLKYYSESTGQKCSRSCCLRKDVSCNLAVFFHDPIHDNVNCLHVHCPTLDSCILEPGTSAILYNITDGIDPDLLVFEQSLPTYLNTRSSSNTWERLRILKTMNLDKQQATEIHQMLPSMEAPSSTTRQDLVANTTTTRYSNELTTDSWARFISLNDATTAKVNVVSPSTEFIGNPDNKTVSPFFVPIDTKLSHMPIPSRLNSSKQLLNKTKGYSSRNQTAESEDPAADGAPGTSATWLVPVALGTSVVFLCCCVVILVSGFCRRRQGQYKPGQRKSGSRQIKKCTILKERS
SIO_010081: MANSC4
subclass of: SO_0000673
so part of: MANSC4
location: join(4086235..4086463,4089215..4089349,4091735..4092408)
location: region:4086235-4092408:1
so has part: feature:4086235-4086463:1:exon
so has part: feature:4089215-4089349:1:exon
so has part: feature:4091735-4092408:1:exon

XP_010995426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4086235-4086463:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4089215-4089349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4091735-4092408:1:exon

MRPS35
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: MRPS35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4096562..4126463)
location: region:4096562-4126463:-1
so has part: feature:4096562-4126463:-1:exon
subclass of: SO_0000010

105103523
type: Gene
SIO_000068: ncbigene

position:4096562:-1
position: 4096562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4126463:-1
position: 4126463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4096562-4126463:-1:exon

MRPS35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MRPS35
product: mitochondrial ribosomal protein S35
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_031443884.1
SIO_010081: MRPS35
subclass of: SO_0000673
so part of: MRPS35
location: complement(join(4096562..4096917,4107442..4107511,4109280..4109389,4113704..4113843,4119856..4119916,4121726..4121893,4123022..4123059,4126304..4126463))
location: region:4096562-4126463:-1
so has part: feature:4126304-4126463:-1:exon
so has part: feature:4123022-4123059:-1:exon
so has part: feature:4121726-4121893:-1:exon
so has part: feature:4119856-4119916:-1:exon
so has part: feature:4113704-4113843:-1:exon
so has part: feature:4109280-4109389:-1:exon
so has part: feature:4107442-4107511:-1:exon
so has part: feature:4096562-4096917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4126304-4126463:-1:exon

position:4126304:-1
position: 4126304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4123022-4123059:-1:exon

position:4123022:-1
position: 4123022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4123059:-1
position: 4123059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4121726-4121893:-1:exon

position:4121726:-1
position: 4121726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4121893:-1
position: 4121893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4119856-4119916:-1:exon

position:4119856:-1
position: 4119856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4119916:-1
position: 4119916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4113704-4113843:-1:exon

position:4113704:-1
position: 4113704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4113843:-1
position: 4113843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4109280-4109389:-1:exon

position:4109280:-1
position: 4109280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4109389:-1
position: 4109389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4107442-4107511:-1:exon

position:4107442:-1
position: 4107442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4107511:-1
position: 4107511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4096562-4096917:-1:exon

position:4096917:-1
position: 4096917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPS35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MRPS35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S35, mitochondrial
translation: MAAAVLPAWLALPPRAGTLRAFSTAVSPATRSPRSRLQRTSRNERPLRRKALPPRTEKMAVDQDWPSVYPVAAPFKPSAVPLPVRMGYPVKRGVPMAKEGNLELLKIPNFLHLTPVAIKKHCEALKDFCTEWPAALDSDEKCEKHFPIEIDTADYVSAGPSIRNPKARVVTLRVKLSSLNLDDHAKKKLIKLVGDRYCKTTDVLTIQTDRCPLKRQNYDYAMYLLTVLYHESWKMEEWEKKKTEADMEEYVWENSSSEKNILETLLQIKAAEKNLELSKEELLATKEVEDYRKSVVSLKNEGDNENTLSQYKESVKKLLNLT
SIO_010081: MRPS35
subclass of: SO_0000673
so part of: MRPS35
location: complement(join(4096648..4096917,4107442..4107511,4109280..4109389,4113704..4113843,4119856..4119916,4121726..4121893,4123022..4123059,4126304..4126415))
location: region:4096648-4126415:-1
so has part: feature:4126304-4126415:-1:exon
so has part: feature:4123022-4123059:-1:exon
so has part: feature:4121726-4121893:-1:exon
so has part: feature:4119856-4119916:-1:exon
so has part: feature:4113704-4113843:-1:exon
so has part: feature:4109280-4109389:-1:exon
so has part: feature:4107442-4107511:-1:exon
so has part: feature:4096648-4096917:-1:exon

XP_031299744.1
type: Protein
SIO_000068: ncbiprotein

position:4096648:-1
position: 4096648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4126415:-1
position: 4126415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4126304-4126415:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4123022-4123059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4121726-4121893:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4119856-4119916:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4113704-4113843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4109280-4109389:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4107442-4107511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4096648-4096917:-1:exon

REP15
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: REP15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4130558..4133564)
location: region:4130558-4133564:-1
so has part: feature:4130558-4133564:-1:exon
subclass of: SO_0000010

105103521
type: Gene
SIO_000068: ncbigene

position:4130558:-1
position: 4130558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4133564:-1
position: 4133564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4130558-4133564:-1:exon

REP15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: REP15
product: RAB15 effector protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031443898.1
SIO_010081: REP15
subclass of: SO_0000673
so part of: REP15
location: complement(4130558..4133564)
location: region:4130558-4133564:-1
so has part: feature:4130558-4133564:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4130558-4133564:-1:exon

REP15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: REP15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab15 effector protein
translation: MGQKPSQQMTLKDSEEVLSICELVSGAIVHAAQKLKEYLGFEDTLGNLCPAPNTLNEIFLIHFVTFCQEKGVDEWLTTTKMTKHQASLFGADWIWTFWGPDKQIRLQLAVQTVQMSSLPRVESNPESRAEASSSKRSRFEKLEEFCNLIGEDCLGLFIIFGVPGKPKDIRGVVLDSVKGETVSLRGGTAVAQFVLETEDCVSIRELLGNCLSKKDGLREVGRVYISIL
SIO_010081: REP15
subclass of: SO_0000673
so part of: REP15
location: complement(4132188..4132874)
location: region:4132188-4132874:-1
so has part: feature:4132188-4132874:-1:exon

XP_031299758.1
type: Protein
SIO_000068: ncbiprotein

position:4132188:-1
position: 4132188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4132874:-1
position: 4132874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4132188-4132874:-1:exon

PPFIBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: PPFIBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4133713..4314265)
location: region:4133713-4314265:-1
so has part: feature:4133713-4314265:-1:exon
subclass of: SO_0000010

105103520
type: Gene
SIO_000068: ncbigene

position:4133713:-1
position: 4133713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4314265:-1
position: 4314265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4133713-4314265:-1:exon

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031443893.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(4133713..4135569,4135695..4135760,4136470..4136646,4137900..4138088,4138853..4138978,4139496..4139618,4142522..4142610,4142768..4142879,4143575..4143725,4145355..4145483,4145783..4145933,4148011..4148043,4148522..4148693,4151369..4151398,4151748..4151808,4153314..4153370,4153946..4154061,4157298..4157452,4160010..4160085,4163113..4163174,4164887..4164919,4166661..4166775,4168155..4168247,4168582..4168674,4172737..4172868,4173931..4174044,4175118..4175204,4185188..4185393,4187994..4188092,4262235..4262330,4314080..4314265))
location: region:4133713-4314265:-1
so has part: feature:4314080-4314265:-1:exon
so has part: feature:4262235-4262330:-1:exon
so has part: feature:4187994-4188092:-1:exon
so has part: feature:4185188-4185393:-1:exon
so has part: feature:4175118-4175204:-1:exon
so has part: feature:4173931-4174044:-1:exon
so has part: feature:4172737-4172868:-1:exon
so has part: feature:4168582-4168674:-1:exon
so has part: feature:4168155-4168247:-1:exon
so has part: feature:4166661-4166775:-1:exon
so has part: feature:4164887-4164919:-1:exon
so has part: feature:4163113-4163174:-1:exon
so has part: feature:4160010-4160085:-1:exon
so has part: feature:4157298-4157452:-1:exon
so has part: feature:4153946-4154061:-1:exon
so has part: feature:4153314-4153370:-1:exon
so has part: feature:4151748-4151808:-1:exon
so has part: feature:4151369-4151398:-1:exon
so has part: feature:4148522-4148693:-1:exon
so has part: feature:4148011-4148043:-1:exon
so has part: feature:4145783-4145933:-1:exon
so has part: feature:4145355-4145483:-1:exon
so has part: feature:4143575-4143725:-1:exon
so has part: feature:4142768-4142879:-1:exon
so has part: feature:4142522-4142610:-1:exon
so has part: feature:4139496-4139618:-1:exon
so has part: feature:4138853-4138978:-1:exon
so has part: feature:4137900-4138088:-1:exon
so has part: feature:4136470-4136646:-1:exon
so has part: feature:4135695-4135760:-1:exon
so has part: feature:4133713-4135569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4314080-4314265:-1:exon

position:4314080:-1
position: 4314080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4262235-4262330:-1:exon

position:4262235:-1
position: 4262235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4262330:-1
position: 4262330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4187994-4188092:-1:exon

position:4187994:-1
position: 4187994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4188092:-1
position: 4188092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4185188-4185393:-1:exon

position:4185188:-1
position: 4185188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4185393:-1
position: 4185393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4175118-4175204:-1:exon

position:4175118:-1
position: 4175118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4175204:-1
position: 4175204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4173931-4174044:-1:exon

position:4173931:-1
position: 4173931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4174044:-1
position: 4174044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4172737-4172868:-1:exon

position:4172737:-1
position: 4172737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4172868:-1
position: 4172868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4168582-4168674:-1:exon

position:4168582:-1
position: 4168582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4168674:-1
position: 4168674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4168155-4168247:-1:exon

position:4168155:-1
position: 4168155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4168247:-1
position: 4168247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4166661-4166775:-1:exon

position:4166661:-1
position: 4166661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4166775:-1
position: 4166775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4164887-4164919:-1:exon

position:4164887:-1
position: 4164887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4164919:-1
position: 4164919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4163113-4163174:-1:exon

position:4163113:-1
position: 4163113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4163174:-1
position: 4163174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4160010-4160085:-1:exon

position:4160010:-1
position: 4160010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4160085:-1
position: 4160085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4157298-4157452:-1:exon

position:4157298:-1
position: 4157298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4157452:-1
position: 4157452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4153946-4154061:-1:exon

position:4153946:-1
position: 4153946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4154061:-1
position: 4154061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4153314-4153370:-1:exon

position:4153314:-1
position: 4153314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4153370:-1
position: 4153370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4151748-4151808:-1:exon

position:4151748:-1
position: 4151748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4151808:-1
position: 4151808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4151369-4151398:-1:exon

position:4151369:-1
position: 4151369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4151398:-1
position: 4151398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4148522-4148693:-1:exon

position:4148522:-1
position: 4148522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4148693:-1
position: 4148693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4148011-4148043:-1:exon

position:4148011:-1
position: 4148011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4148043:-1
position: 4148043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4145783-4145933:-1:exon

position:4145783:-1
position: 4145783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4145933:-1
position: 4145933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4145355-4145483:-1:exon

position:4145355:-1
position: 4145355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4145483:-1
position: 4145483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4143575-4143725:-1:exon

position:4143575:-1
position: 4143575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4143725:-1
position: 4143725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4142768-4142879:-1:exon

position:4142768:-1
position: 4142768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4142879:-1
position: 4142879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4142522-4142610:-1:exon

position:4142522:-1
position: 4142522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4142610:-1
position: 4142610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4139496-4139618:-1:exon

position:4139496:-1
position: 4139496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4139618:-1
position: 4139618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4138853-4138978:-1:exon

position:4138853:-1
position: 4138853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4138978:-1
position: 4138978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4137900-4138088:-1:exon

position:4137900:-1
position: 4137900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4138088:-1
position: 4138088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4136470-4136646:-1:exon

position:4136470:-1
position: 4136470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4136646:-1
position: 4136646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4135695-4135760:-1:exon

position:4135695:-1
position: 4135695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4135760:-1
position: 4135760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:4133713-4135569:-1:exon

position:4135569:-1
position: 4135569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031443895.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(4133713..4135569,4135695..4135760,4136470..4136646,4137900..4138088,4138853..4138978,4139496..4139618,4142522..4142610,4142768..4142879,4143575..4143725,4145355..4145483,4145783..4145933,4148011..4148043,4148522..4148693,4151369..4151398,4151748..4151808,4153314..4153370,4153946..4154061,4157298..4157452,4160010..4160085,4163113..4163174,4164887..4164919,4166661..4166775,4168155..4168247,4168582..4168674,4172737..4172868,4173931..4174044,4175118..4175204,4185188..4185393,4187994..4188092,4262235..4262330,4266733..4266907,4314080..4314265))
location: region:4133713-4314265:-1
so has part: feature:4314080-4314265:-1:exon
so has part: feature:4266733-4266907:-1:exon
so has part: feature:4262235-4262330:-1:exon
so has part: feature:4187994-4188092:-1:exon
so has part: feature:4185188-4185393:-1:exon
so has part: feature:4175118-4175204:-1:exon
so has part: feature:4173931-4174044:-1:exon
so has part: feature:4172737-4172868:-1:exon
so has part: feature:4168582-4168674:-1:exon
so has part: feature:4168155-4168247:-1:exon
so has part: feature:4166661-4166775:-1:exon
so has part: feature:4164887-4164919:-1:exon
so has part: feature:4163113-4163174:-1:exon
so has part: feature:4160010-4160085:-1:exon
so has part: feature:4157298-4157452:-1:exon
so has part: feature:4153946-4154061:-1:exon
so has part: feature:4153314-4153370:-1:exon
so has part: feature:4151748-4151808:-1:exon
so has part: feature:4151369-4151398:-1:exon
so has part: feature:4148522-4148693:-1:exon
so has part: feature:4148011-4148043:-1:exon
so has part: feature:4145783-4145933:-1:exon
so has part: feature:4145355-4145483:-1:exon
so has part: feature:4143575-4143725:-1:exon
so has part: feature:4142768-4142879:-1:exon
so has part: feature:4142522-4142610:-1:exon
so has part: feature:4139496-4139618:-1:exon
so has part: feature:4138853-4138978:-1:exon
so has part: feature:4137900-4138088:-1:exon
so has part: feature:4136470-4136646:-1:exon
so has part: feature:4135695-4135760:-1:exon
so has part: feature:4133713-4135569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4314080-4314265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4266733-4266907:-1:exon

position:4266733:-1
position: 4266733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4266907:-1
position: 4266907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4262235-4262330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4187994-4188092:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4185188-4185393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4175118-4175204:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4173931-4174044:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4172737-4172868:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4168582-4168674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4168155-4168247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4166661-4166775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4164887-4164919:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4163113-4163174:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4160010-4160085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4157298-4157452:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4153946-4154061:-1:exon

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PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031443894.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(4133713..4135569,4135695..4135760,4136470..4136646,4137900..4138088,4138853..4138978,4139496..4139618,4142522..4142610,4142768..4142879,4143575..4143725,4145355..4145483,4145783..4145933,4148011..4148043,4148522..4148693,4151369..4151398,4151748..4151808,4153314..4153370,4153946..4154061,4157298..4157452,4160010..4160085,4163113..4163174,4164887..4164919,4166661..4166775,4168155..4168247,4168582..4168674,4172737..4172868,4173931..4174044,4175118..4175204,4185188..4185393,4187994..4188092,4262235..4262330,4302886..4302967,4314080..4314265))
location: region:4133713-4314265:-1
so has part: feature:4314080-4314265:-1:exon
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position: 4302886
reference: sequence
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position:4302967:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
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SIO_000628: feature:4133713-4135569:-1:exon

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031443896.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(4133713..4135569,4135695..4135760,4136470..4136646,4137900..4138088,4138853..4138978,4139496..4139618,4142522..4142610,4142768..4142879,4143575..4143725,4145355..4145483,4145783..4145933,4148011..4148043,4148522..4148693,4151369..4151398,4151748..4151808,4153314..4153370,4153946..4154061,4157298..4157452,4160010..4160085,4163113..4163174,4164887..4164919,4166661..4166775,4168155..4168247,4168582..4168674,4172737..4172868,4173931..4174044,4175118..4175204,4185188..4185393,4187994..4188092,4260323..4260429))
location: region:4133713-4260429:-1
so has part: feature:4260323-4260429:-1:exon
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so has part: feature:4135695-4135760:-1:exon
so has part: feature:4133713-4135569:-1:exon

position:4260429:-1
position: 4260429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4260323-4260429:-1:exon

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urn:…
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SIO_000628: feature:4133713-4135569:-1:exon

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031443897.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(4133713..4135569,4135695..4135760,4136470..4136646,4137900..4138088,4138853..4138978,4139496..4139618,4142522..4142610,4142768..4142879,4143575..4143725,4145355..4145483,4145783..4145933,4148011..4148043,4148522..4148693,4151369..4151398,4151748..4151808,4153314..4153370,4153946..4154061,4157298..4157452,4160010..4160085,4163113..4163174,4164887..4164919,4166661..4166775,4168155..4168247,4168582..4168674,4172737..4172868,4173931..4174044,4175118..4175204,4185188..4185393,4187994..4188092,4214255..4214463))
location: region:4133713-4214463:-1
so has part: feature:4214255-4214463:-1:exon
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position:4214463:-1
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urn:…
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PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031443891.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(4133713..4135569,4135695..4135760,4136470..4136646,4137900..4138088,4138853..4138978,4139496..4139618,4142522..4142610,4142768..4142879,4143575..4143725,4145355..4145483,4145783..4145933,4148011..4148043,4148522..4148693,4151369..4151398,4151748..4151808,4153314..4153370,4153946..4154061,4157298..4157452,4160010..4160085,4163113..4163174,4164887..4164919,4166661..4166775,4168155..4168247,4168582..4168674,4172737..4172868,4173931..4174044,4175118..4175204,4185188..4185393,4187994..4188092,4204496..4204647))
location: region:4133713-4204647:-1
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position:4204647:-1
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PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_031443892.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(4133713..4135569,4135695..4135760,4136470..4136646,4137900..4138088,4138853..4138978,4139496..4139618,4142522..4142610,4142768..4142879,4143575..4143725,4145355..4145483,4145783..4145933,4148522..4148693,4151369..4151398,4151748..4151808,4153314..4153370,4153946..4154061,4157298..4157452,4160010..4160085,4163113..4163174,4166661..4166775,4168582..4168674,4172737..4172868,4173931..4174044,4175118..4175204,4185188..4185393,4187994..4188092))
location: region:4133713-4188092:-1
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PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_031443890.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(4133713..4135569,4135695..4135760,4136470..4136646,4137900..4138088,4138853..4138978,4139496..4139618,4142522..4142610,4142768..4142879,4143575..4143725,4145355..4145483,4145783..4145933,4148011..4148043,4148522..4148693,4151369..4151398,4151748..4151808,4153314..4153370,4153946..4154061,4157298..4157452,4160010..4160085,4163113..4163174,4166661..4166775,4168582..4168674,4172737..4172868,4173931..4174044,4175118..4175204,4185188..4185393,4187994..4188092))
location: region:4133713-4188092:-1
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PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_031443889.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
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location: region:4133713-4188092:-1
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PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_031443887.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
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location: region:4133713-4188092:-1
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SIO_000628: feature:4166661-4166775:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4163113-4163174:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4160010-4160085:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4157298-4157452:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4153946-4154061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4153314-4153370:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4151748-4151808:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4151369-4151398:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4148522-4148693:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4145783-4145933:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4145355-4145483:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4143575-4143725:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4142768-4142879:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4142522-4142610:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4139496-4139618:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4138853-4138978:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4137900-4138088:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4136470-4136646:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4135695-4135760:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4133713-4135569:-1:exon

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031443885.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(4133713..4135569,4135695..4135760,4136470..4136646,4137900..4138088,4138853..4138978,4139496..4139618,4142522..4142610,4142768..4142879,4143575..4143725,4145355..4145483,4145783..4145933,4148011..4148043,4148522..4148693,4151369..4151398,4151748..4151808,4153314..4153370,4153946..4154061,4157298..4157452,4160010..4160085,4163113..4163174,4166661..4166775,4168155..4168247,4168582..4168674,4172737..4172868,4173931..4174044,4175118..4175204,4185188..4185393,4187994..4188092))
location: region:4133713-4188092:-1
so has part: feature:4187994-4188092:-1:exon
so has part: feature:4185188-4185393:-1:exon
so has part: feature:4175118-4175204:-1:exon
so has part: feature:4173931-4174044:-1:exon
so has part: feature:4172737-4172868:-1:exon
so has part: feature:4168582-4168674:-1:exon
so has part: feature:4168155-4168247:-1:exon
so has part: feature:4166661-4166775:-1:exon
so has part: feature:4163113-4163174:-1:exon
so has part: feature:4160010-4160085:-1:exon
so has part: feature:4157298-4157452:-1:exon
so has part: feature:4153946-4154061:-1:exon
so has part: feature:4153314-4153370:-1:exon
so has part: feature:4151748-4151808:-1:exon
so has part: feature:4151369-4151398:-1:exon
so has part: feature:4148522-4148693:-1:exon
so has part: feature:4148011-4148043:-1:exon
so has part: feature:4145783-4145933:-1:exon
so has part: feature:4145355-4145483:-1:exon
so has part: feature:4143575-4143725:-1:exon
so has part: feature:4142768-4142879:-1:exon
so has part: feature:4142522-4142610:-1:exon
so has part: feature:4139496-4139618:-1:exon
so has part: feature:4138853-4138978:-1:exon
so has part: feature:4137900-4138088:-1:exon
so has part: feature:4136470-4136646:-1:exon
so has part: feature:4135695-4135760:-1:exon
so has part: feature:4133713-4135569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4187994-4188092:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4185188-4185393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4175118-4175204:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4173931-4174044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4172737-4172868:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4168582-4168674:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4168155-4168247:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4166661-4166775:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4163113-4163174:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4160010-4160085:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4157298-4157452:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4153946-4154061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4153314-4153370:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4151748-4151808:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4151369-4151398:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4148522-4148693:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4148011-4148043:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4145783-4145933:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4145355-4145483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4143575-4143725:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4142768-4142879:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4142522-4142610:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4139496-4139618:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4138853-4138978:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4137900-4138088:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4136470-4136646:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4135695-4135760:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4133713-4135569:-1:exon

PPFIBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PPFIBP1
product: PPFIA binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031443886.1
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(4133713..4135569,4135695..4135760,4136470..4136646,4137900..4138088,4138853..4138978,4139496..4139618,4142522..4142610,4142768..4142879,4143575..4143725,4145355..4145483,4145783..4145933,4148522..4148693,4151369..4151398,4151748..4151808,4153314..4153370,4153946..4154061,4157298..4157452,4160010..4160085,4163113..4163174,4164887..4164919,4166661..4166775,4168155..4168247,4168582..4168674,4172737..4172868,4173931..4174044,4175118..4175204,4185188..4185393,4187994..4188092))
location: region:4133713-4188092:-1
so has part: feature:4187994-4188092:-1:exon
so has part: feature:4185188-4185393:-1:exon
so has part: feature:4175118-4175204:-1:exon
so has part: feature:4173931-4174044:-1:exon
so has part: feature:4172737-4172868:-1:exon
so has part: feature:4168582-4168674:-1:exon
so has part: feature:4168155-4168247:-1:exon
so has part: feature:4166661-4166775:-1:exon
so has part: feature:4164887-4164919:-1:exon
so has part: feature:4163113-4163174:-1:exon
so has part: feature:4160010-4160085:-1:exon
so has part: feature:4157298-4157452:-1:exon
so has part: feature:4153946-4154061:-1:exon
so has part: feature:4153314-4153370:-1:exon
so has part: feature:4151748-4151808:-1:exon
so has part: feature:4151369-4151398:-1:exon
so has part: feature:4148522-4148693:-1:exon
so has part: feature:4145783-4145933:-1:exon
so has part: feature:4145355-4145483:-1:exon
so has part: feature:4143575-4143725:-1:exon
so has part: feature:4142768-4142879:-1:exon
so has part: feature:4142522-4142610:-1:exon
so has part: feature:4139496-4139618:-1:exon
so has part: feature:4138853-4138978:-1:exon
so has part: feature:4137900-4138088:-1:exon
so has part: feature:4136470-4136646:-1:exon
so has part: feature:4135695-4135760:-1:exon
so has part: feature:4133713-4135569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4187994-4188092:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4185188-4185393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4175118-4175204:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4173931-4174044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4172737-4172868:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4168582-4168674:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4168155-4168247:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4166661-4166775:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4164887-4164919:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4163113-4163174:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4160010-4160085:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4157298-4157452:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4153946-4154061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4153314-4153370:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4151748-4151808:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4151369-4151398:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4148522-4148693:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4145783-4145933:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4145355-4145483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4143575-4143725:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4142768-4142879:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4142522-4142610:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4139496-4139618:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4138853-4138978:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4137900-4138088:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4136470-4136646:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4135695-4135760:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4133713-4135569:-1:exon

PPFIBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PPFIBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liprin-beta-1 isoform X6
translation: MDTPCRPWSGHSVGTGFASGSRQLLYRGWNLPLTNSKMMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGVLEVMETDEKEGLRCQIPDSTAETLIEWLQSHMTNGHLPGNGDVYQERLARLENDKESLILQVSVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLDLMAEISNLKLKLTAVEKDRLDYEDRFRDTEGLMQEINDLRLRVSEMDSERLQYEKKLKSTKSLMAKLSSMKIKVGQMQYEKQRMEQKWESLKEELALLKEQLEEKESEVKRLQEKLVCKMKGEGIEILDRDENFKKKLKDKNIEVQKMKKAVESLMAANEEKDRKIEDLRQCLNRYKKMQDTAVLAQGQDGDFEDLLPSGSISTLLDAQSFSDLEKNLSPMPGTGSPSRDPLNTSVPEEFHTSILQVSIPSSLPASKGLETLEKAKLPPKPETSLEENDGKIILGSAAETQSCDGLLTSSLQKSSSLGNLKKESSDGEKESIPRPSEDKAPVESSPFGSLPPKAPGHDASVDDNPFGTRKARSSFGRGFFKIKSNKRTASAPNLDRKRSASAPTLAETEKETPEHLDLAGVSSRPKDSQASSPFQVSPPSPDSKKKSRGIMKLFGKLRRSQSTTFNPDDMSEPEFKRGGTRATAGPRLGWSRDLGQSNSDLDMPFAKWTKEQVCSWLVEQGLGSYLNSGKHWISSGQTLLQASQQDLEKELGIKHSLHRKKLQLALQALGSEEETNHGKLDFNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVVSVLHHLSIKRAIQVLRINNFEPNCLRRRPSDENSVTPSEVQQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMAQLLNIPPSKTLLRRHLATHFNLLVGAEAQHQKRDAMELPDYVLLTATAKVKPKKLTFSNFGNLRKKKQEDGEEYVCPMELGQASGGTKKGFKPGLDMHLYDEDDLDRLEQMEDSEGTVRQIGAFSEGINNLTHMLKEDDMFKDFAARSPSASITDEDSNV
SIO_010081: PPFIBP1
subclass of: SO_0000673
so part of: PPFIBP1
location: complement(join(4135483..4135569,4135695..4135760,4136470..4136646,4137900..4138088,4138853..4138978,4139496..4139618,4142522..4142610,4142768..4142879,4143575..4143725,4145355..4145483,4145783..4145933,4148011..4148043,4148522..4148693,4151369..4151398,4151748..4151808,4153314..4153370,4153946..4154061,4157298..4157452,4160010..4160085,4163113..4163174,4164887..4164919,4166661..4166775,4168155..4168247,4168582..4168674,4172737..4172868,4173931..4174044,4175118..4175204,4185188..4185393,4187994..4188092,4204496..4204571))
location: region:4135483-4204571:-1
so has part: feature:4204496-4204571:-1:exon
so has part: feature:4187994-4188092:-1:exon
so has part: feature:4185188-4185393:-1:exon
so has part: feature:4175118-4175204:-1:exon
so has part: feature:4173931-4174044:-1:exon
so has part: feature:4172737-4172868:-1:exon
so has part: feature:4168582-4168674:-1:exon
so has part: feature:4168155-4168247:-1:exon
so has part: feature:4166661-4166775:-1:exon
so has part: feature:4164887-4164919:-1:exon
so has part: feature:4163113-4163174:-1:exon
so has part: feature:4160010-4160085:-1:exon
so has part: feature:4157298-4157452:-1:exon
so has part: feature:4153946-4154061:-1:exon
so has part: feature:4153314-4153370:-1:exon
so has part: feature:4151748-4151808:-1:exon
so has part: feature:4151369-4151398:-1:exon
so has part: feature:4148522-4148693:-1:exon
so has part: feature:4148011-4148043:-1:exon
so has part: feature:4145783-4145933:-1:exon
so has part: feature:4145355-4145483:-1:exon
so has part: feature:4143575-4143725:-1:exon
so has part: feature:4142768-4142879:-1:exon
so has part: feature:4142522-4142610:-1:exon
so has part: feature:4139496-4139618:-1:exon
so has part: feature:4138853-4138978:-1:exon
so has part: feature:4137900-4138088:-1:exon
so has part: feature:4136470-4136646:-1:exon
so has part: feature:4135695-4135760:-1:exon
so has part: feature:4135483-4135569:-1:exon

XP_031299751.1
type: Protein
SIO_000068: ncbiprotein

position:4135483:-1
position: 4135483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4204571:-1
position: 4204571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4204496-4204571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4187994-4188092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4185188-4185393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4175118-4175204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4173931-4174044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4172737-4172868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4168582-4168674:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4168155-4168247:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4166661-4166775:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4164887-4164919:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4163113-4163174:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4160010-4160085:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4157298-4157452:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4153946-4154061:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4153314-4153370:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4151748-4151808:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4151369-4151398:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4148522-4148693:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4148011-4148043:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4145783-4145933:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4145355-4145483:-1:exon