Camelus dromedarius isolate Drom800 breed African chromosome 33, CamDro3, whole genome shotgun sequence.
type: Entry
definition: Camelus dromedarius isolate Drom800 breed African chromosome 33, CamDro3, whole genome shotgun sequence.
sequence version: NC_044543.1
sequence date: 2019-10-23
sequence: sequence
division: CON
label: NC_044543.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA565028
dblink: SAMN03252735
keyword: WGS
keyword: RefSeq
source: Camelus dromedarius (Arabian camel)
organism: Camelus dromedarius
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Tylopoda; Camelidae; Camelus.
reference: 1
references: 30972949
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016659.2.\nAssembly name: CamDro3\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vetmeduni Vienna on\n2019/10/07. The original whole-genome shotgun project has the\naccession JWIN00000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vetmeduni Vienna\nAssembly Date :: FEB-2019\nAssembly Method :: ABySS v. 1.3.6; HiRise v. MAY-2017;\n PBJelly v. 15.8.24; Pilon v. 1.22; ABySS\n Sealer v. 2.0.2; HiRise v. MAY-2018;\n PBJelly v. 15.8.24; BBMAP-CallVariants v.\n 38.12; ABySS Sealer v. 2.1.0\nAssembly Name :: CamDro3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 65.0x\nSequencing Technology :: Illumina HiSeq; Dovetail Hi-C and\n Chicago; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camelus dromedarius Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 23363481
topology: linear
so has quality: SO_0000987
location: 1..23363481
location: region:1-23363481:1
RO_0002162: 9838

NC_044543
type: RefSeq
SIO_000068: refseq

PRJNA565028
type: BioProject
SIO_000068: bioproject

SAMN03252735
type: BioSample
SIO_000068: biosample

1
title: Improving Illumina assemblies with Hi-C and long reads: An example with the North African dromedary
author: Elbers, J.P.
author: Rogers, M.F.
author: Perelman, P.L.
author: Proskuryakova, A.A.
author: Serdyukova, N.A.
author: Johnson, W.E.
author: Horin, P.
author: Corander, J.
author: Murphy, D.
author: Burger, P.A.
journal: Mol Ecol Resour
volume: 19
issue: 4
pages: 1015-1026
year: 2019
pubmed: 30972949

30972949
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23363481:1
position: 23363481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23363481:1:source
so part of: sequence
organism: Camelus dromedarius
mol type: genomic DNA
isolate: Drom800
isolation source: isolated from an animal called Varis
chromosome: 33
sex: female
tissue type: blood
dev stage: adult
country: Austria: Eithental
collection date: 13-Jan-2013
collected by: Pamela Burger
breed: African

9838
type: Taxonomy
SIO_000068: taxonomy

B3GAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: B3GAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 122884..144741
location: region:122884-144741:1
so has part: feature:122884-144741:1:exon
subclass of: SO_0000010

105104231
type: Gene
SIO_000068: ncbigene

position:122884:1
position: 122884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144741:1
position: 144741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122884-144741:1:exon

B3GAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: B3GAT1
product: beta-1,3-glucuronyltransferase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031443338.1
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(122884..123265,132610..133395,139683..140212,140700..140996,141754..141854,142768..144741)
location: region:122884-144741:1
so has part: feature:122884-123265:1:exon
so has part: feature:132610-133395:1:exon
so has part: feature:139683-140212:1:exon
so has part: feature:140700-140996:1:exon
so has part: feature:141754-141854:1:exon
so has part: feature:142768-144741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122884-123265:1:exon

position:123265:1
position: 123265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:132610-133395:1:exon

position:132610:1
position: 132610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133395:1
position: 133395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:139683-140212:1:exon

position:139683:1
position: 139683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140212:1
position: 140212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:140700-140996:1:exon

position:140700:1
position: 140700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140996:1
position: 140996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:141754-141854:1:exon

position:141754:1
position: 141754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141854:1
position: 141854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:142768-144741:1:exon

position:142768:1
position: 142768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B3GAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: B3GAT1
product: beta-1,3-glucuronyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031443336.1
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(122887..123265,132610..136519,136647..136793,139704..140212,140700..140996,141754..141854,142814..144741)
location: region:122887-144741:1
so has part: feature:122887-123265:1:exon
so has part: feature:132610-136519:1:exon
so has part: feature:136647-136793:1:exon
so has part: feature:139704-140212:1:exon
so has part: feature:140700-140996:1:exon
so has part: feature:141754-141854:1:exon
so has part: feature:142814-144741:1:exon

position:122887:1
position: 122887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122887-123265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132610-136519:1:exon

position:136519:1
position: 136519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:136647-136793:1:exon

position:136647:1
position: 136647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136793:1
position: 136793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:139704-140212:1:exon

position:139704:1
position: 139704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:140700-140996:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141754-141854:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:142814-144741:1:exon

position:142814:1
position: 142814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B3GAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: B3GAT1
product: beta-1,3-glucuronyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031443335.1
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(122888..123265,132610..136519,136647..136793,139704..140212,140700..140996,141754..141854,142768..144741)
location: region:122888-144741:1
so has part: feature:122888-123265:1:exon
so has part: feature:132610-136519:1:exon
so has part: feature:136647-136793:1:exon
so has part: feature:139704-140212:1:exon
so has part: feature:140700-140996:1:exon
so has part: feature:141754-141854:1:exon
so has part: feature:142768-144741:1:exon

position:122888:1
position: 122888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122888-123265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132610-136519:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136647-136793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139704-140212:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140700-140996:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141754-141854:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:142768-144741:1:exon

B3GAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: B3GAT1
product: beta-1,3-glucuronyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031443337.1
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(122888..123265,132610..132696,136427..136519,136647..136793,139704..140212,140700..140996,141754..141854,142768..144741)
location: region:122888-144741:1
so has part: feature:122888-123265:1:exon
so has part: feature:132610-132696:1:exon
so has part: feature:136427-136519:1:exon
so has part: feature:136647-136793:1:exon
so has part: feature:139704-140212:1:exon
so has part: feature:140700-140996:1:exon
so has part: feature:141754-141854:1:exon
so has part: feature:142768-144741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122888-123265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132610-132696:1:exon

position:132696:1
position: 132696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:136427-136519:1:exon

position:136427:1
position: 136427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:136647-136793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139704-140212:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140700-140996:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141754-141854:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142768-144741:1:exon

B3GAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: B3GAT1
product: beta-1,3-glucuronyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_010997912.2
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(122888..123265,136427..136519,136647..136793,139704..140212,140700..140996,141754..141854,142768..144741)
location: region:122888-144741:1
so has part: feature:122888-123265:1:exon
so has part: feature:136427-136519:1:exon
so has part: feature:136647-136793:1:exon
so has part: feature:139704-140212:1:exon
so has part: feature:140700-140996:1:exon
so has part: feature:141754-141854:1:exon
so has part: feature:142768-144741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122888-123265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136427-136519:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136647-136793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139704-140212:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140700-140996:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141754-141854:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:142768-144741:1:exon

B3GAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: B3GAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X3
translation: MPPYTSLFRPPADDGSDSRREVPPGTDPREYCMSDRDIVEVVRTEYVYTRPPPWSDTLPTIHVVTPTYSRPVQKAELTRMANTLLHVPNLHWLVVEDAPRRTPLTARLLRDTGLNYTHLHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGGLRYEAPRVNGAGKVVGWKTVFDPHRPFAIDMAGFAVNLRLILQRSQAYFKLRGVKGGYQESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNEGKKGFTDPTVEI
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(133380..133395,139683..140212,140700..140996,141754..141840)
location: region:133380-141840:1
so has part: feature:133380-133395:1:exon
so has part: feature:139683-140212:1:exon
so has part: feature:140700-140996:1:exon
so has part: feature:141754-141840:1:exon

XP_031299198.1
type: Protein
SIO_000068: ncbiprotein

position:133380:1
position: 133380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141840:1
position: 141840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133380-133395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139683-140212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140700-140996:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141754-141840:1:exon

B3GAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: B3GAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1
translation: MRSLEHRDELGFDPRQVCLHLHPADSKWAAHALCLWGQRLAGRSRDPPRKLNALYPQPASPAGACPTQVSGHPPLLCLAGVHPAGFLTASWTTHSSASSRVGLCRTASAMGNEELWTQPALEMPKRRDVLAIVLIVLPWTLLVTVWHQSTIAPLLAAHKDDGSDSRREVPPGTDPREYCMSDRDIVEVVRTEYVYTRPPPWSDTLPTIHVVTPTYSRPVQKAELTRMANTLLHVPNLHWLVVEDAPRRTPLTARLLRDTGLNYTHLHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGGLRYEAPRVNGAGKVVGWKTVFDPHRPFAIDMAGFAVNLRLILQRSQAYFKLRGVKGGYQESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNEGKKGFTDPTVEI
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(136189..136519,136647..136793,139704..140212,140700..140996,141754..141840)
location: region:136189-141840:1
so has part: feature:136189-136519:1:exon
so has part: feature:136647-136793:1:exon
so has part: feature:139704-140212:1:exon
so has part: feature:140700-140996:1:exon
so has part: feature:141754-141840:1:exon

XP_031299195.1
type: Protein
SIO_000068: ncbiprotein

position:136189:1
position: 136189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136189-136519:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136647-136793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139704-140212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140700-140996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141754-141840:1:exon

B3GAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: B3GAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1
translation: MRSLEHRDELGFDPRQVCLHLHPADSKWAAHALCLWGQRLAGRSRDPPRKLNALYPQPASPAGACPTQVSGHPPLLCLAGVHPAGFLTASWTTHSSASSRVGLCRTASAMGNEELWTQPALEMPKRRDVLAIVLIVLPWTLLVTVWHQSTIAPLLAAHKDDGSDSRREVPPGTDPREYCMSDRDIVEVVRTEYVYTRPPPWSDTLPTIHVVTPTYSRPVQKAELTRMANTLLHVPNLHWLVVEDAPRRTPLTARLLRDTGLNYTHLHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGGLRYEAPRVNGAGKVVGWKTVFDPHRPFAIDMAGFAVNLRLILQRSQAYFKLRGVKGGYQESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNEGKKGFTDPTVEI
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(136189..136519,136647..136793,139704..140212,140700..140996,141754..141840)
location: region:136189-141840:1
so has part: feature:136189-136519:1:exon
so has part: feature:136647-136793:1:exon
so has part: feature:139704-140212:1:exon
so has part: feature:140700-140996:1:exon
so has part: feature:141754-141840:1:exon

XP_031299196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136189-136519:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136647-136793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139704-140212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140700-140996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141754-141840:1:exon

B3GAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: B3GAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2
translation: MGNEELWTQPALEMPKRRDVLAIVLIVLPWTLLVTVWHQSTIAPLLAAHKDDGSDSRREVPPGTDPREYCMSDRDIVEVVRTEYVYTRPPPWSDTLPTIHVVTPTYSRPVQKAELTRMANTLLHVPNLHWLVVEDAPRRTPLTARLLRDTGLNYTHLHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGGLRYEAPRVNGAGKVVGWKTVFDPHRPFAIDMAGFAVNLRLILQRSQAYFKLRGVKGGYQESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNEGKKGFTDPTVEI
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(136516..136519,136647..136793,139704..140212,140700..140996,141754..141840)
location: region:136516-141840:1
so has part: feature:136516-136519:1:exon
so has part: feature:136647-136793:1:exon
so has part: feature:139704-140212:1:exon
so has part: feature:140700-140996:1:exon
so has part: feature:141754-141840:1:exon

XP_010996214.2
type: Protein
SIO_000068: ncbiprotein

position:136516:1
position: 136516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136516-136519:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136647-136793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139704-140212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140700-140996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141754-141840:1:exon

B3GAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: B3GAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2
translation: MGNEELWTQPALEMPKRRDVLAIVLIVLPWTLLVTVWHQSTIAPLLAAHKDDGSDSRREVPPGTDPREYCMSDRDIVEVVRTEYVYTRPPPWSDTLPTIHVVTPTYSRPVQKAELTRMANTLLHVPNLHWLVVEDAPRRTPLTARLLRDTGLNYTHLHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGGLRYEAPRVNGAGKVVGWKTVFDPHRPFAIDMAGFAVNLRLILQRSQAYFKLRGVKGGYQESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNEGKKGFTDPTVEI
SIO_010081: B3GAT1
subclass of: SO_0000673
so part of: B3GAT1
location: join(136516..136519,136647..136793,139704..140212,140700..140996,141754..141840)
location: region:136516-141840:1
so has part: feature:136516-136519:1:exon
so has part: feature:136647-136793:1:exon
so has part: feature:139704-140212:1:exon
so has part: feature:140700-140996:1:exon
so has part: feature:141754-141840:1:exon

XP_031299197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136516-136519:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136647-136793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139704-140212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140700-140996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141754-141840:1:exon

GLB1L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: GLB1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(146262..177090)
location: region:146262-177090:-1
so has part: feature:146262-177090:-1:exon
subclass of: SO_0000010

105104230
type: Gene
SIO_000068: ncbigene

position:146262:-1
position: 146262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177090:-1
position: 177090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146262-177090:-1:exon

GLB1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GLB1L2
product: galactosidase beta 1 like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031443339.1
SIO_010081: GLB1L2
subclass of: SO_0000673
so part of: GLB1L2
location: complement(join(146262..147135,147326..147442,147809..147920,148157..148244,149484..149562,149812..149883,150056..150196,150728..150834,151228..151308,151776..151913,153174..153258,155878..155948,158943..159024,159616..159708,164128..164236,166178..166273,166824..166892,167800..167997,176965..177090))
location: region:146262-177090:-1
so has part: feature:176965-177090:-1:exon
so has part: feature:167800-167997:-1:exon
so has part: feature:166824-166892:-1:exon
so has part: feature:166178-166273:-1:exon
so has part: feature:164128-164236:-1:exon
so has part: feature:159616-159708:-1:exon
so has part: feature:158943-159024:-1:exon
so has part: feature:155878-155948:-1:exon
so has part: feature:153174-153258:-1:exon
so has part: feature:151776-151913:-1:exon
so has part: feature:151228-151308:-1:exon
so has part: feature:150728-150834:-1:exon
so has part: feature:150056-150196:-1:exon
so has part: feature:149812-149883:-1:exon
so has part: feature:149484-149562:-1:exon
so has part: feature:148157-148244:-1:exon
so has part: feature:147809-147920:-1:exon
so has part: feature:147326-147442:-1:exon
so has part: feature:146262-147135:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176965-177090:-1:exon

position:176965:-1
position: 176965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:167800-167997:-1:exon

position:167800:-1
position: 167800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167997:-1
position: 167997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:166824-166892:-1:exon

position:166824:-1
position: 166824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166892:-1
position: 166892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:166178-166273:-1:exon

position:166178:-1
position: 166178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166273:-1
position: 166273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:164128-164236:-1:exon

position:164128:-1
position: 164128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164236:-1
position: 164236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:159616-159708:-1:exon

position:159616:-1
position: 159616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159708:-1
position: 159708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:158943-159024:-1:exon

position:158943:-1
position: 158943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159024:-1
position: 159024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:155878-155948:-1:exon

position:155878:-1
position: 155878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155948:-1
position: 155948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:153174-153258:-1:exon

position:153174:-1
position: 153174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153258:-1
position: 153258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:151776-151913:-1:exon

position:151776:-1
position: 151776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151913:-1
position: 151913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:151228-151308:-1:exon

position:151228:-1
position: 151228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151308:-1
position: 151308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:150728-150834:-1:exon

position:150728:-1
position: 150728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150834:-1
position: 150834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:150056-150196:-1:exon

position:150056:-1
position: 150056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150196:-1
position: 150196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:149812-149883:-1:exon

position:149812:-1
position: 149812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149883:-1
position: 149883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:149484-149562:-1:exon

position:149484:-1
position: 149484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149562:-1
position: 149562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:148157-148244:-1:exon

position:148157:-1
position: 148157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148244:-1
position: 148244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:147809-147920:-1:exon

position:147809:-1
position: 147809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147920:-1
position: 147920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:147326-147442:-1:exon

position:147326:-1
position: 147326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147442:-1
position: 147442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:146262-147135:-1:exon

position:147135:-1
position: 147135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GLB1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GLB1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2
translation: MPTWSARRRPGRTLGLLLLVILSFLVLRRWSWRGLVPTWLRHRHSGLQAKGQNFMLEDSTFWIFGGSIHYFRVPREYWRDRLLKLRACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAFVLLAAEVGLWVILRPGPYVCSELDLGGLPSWLLQDSGMRLRTTYKGFTDAVDLYFDHLMSRVVPLQYRYGGPVIAVQVENEYGSYNRDPAYMPYVKRALEDRGIVELLLTSDNKDGLSKGVMDGVLATINLQSQSELQLLVTYLLSVQSVQPKMVMEYWTGWFDSWGGPHNILDSSEVLKTVSAIVDAGSSINLYMFHGGTNFGFMNGALHFQDYKSDVTSYDYDAVLTEAGDYTAKYVKLREFFGSVSGAPLPLPPDLLPKTAYEAVKPVFCLSLWDVLPYLEEPVSSEKPVNMENLPINDGNGQSFGYTLYETTITSSGILSGLVRDRGQVFVNTVSVGFLDYKRKEVAIPLIQGFILLRILVENCGRVNYGDNINDQRKGLIGDLYLNDSPLRGFKIYSLEMKKGFFKSFLGDKWNPVPDVPTFPAFFLGVLSVPLSPYDTFMKLEGWEKGVVFVNGQNLGRYWNVGPQETLYLPGVWLAEGINQVIVFEEKMAGPMIQFTETPHLGRRQYVD
SIO_010081: GLB1L2
subclass of: SO_0000673
so part of: GLB1L2
location: complement(join(147049..147135,147326..147442,147809..147920,148157..148244,149484..149562,149812..149883,150056..150196,150728..150834,151228..151308,151776..151913,153174..153258,155878..155948,158943..159024,159616..159708,164128..164236,166178..166273,166824..166892,167800..167997,176965..177050))
location: region:147049-177050:-1
so has part: feature:176965-177050:-1:exon
so has part: feature:167800-167997:-1:exon
so has part: feature:166824-166892:-1:exon
so has part: feature:166178-166273:-1:exon
so has part: feature:164128-164236:-1:exon
so has part: feature:159616-159708:-1:exon
so has part: feature:158943-159024:-1:exon
so has part: feature:155878-155948:-1:exon
so has part: feature:153174-153258:-1:exon
so has part: feature:151776-151913:-1:exon
so has part: feature:151228-151308:-1:exon
so has part: feature:150728-150834:-1:exon
so has part: feature:150056-150196:-1:exon
so has part: feature:149812-149883:-1:exon
so has part: feature:149484-149562:-1:exon
so has part: feature:148157-148244:-1:exon
so has part: feature:147809-147920:-1:exon
so has part: feature:147326-147442:-1:exon
so has part: feature:147049-147135:-1:exon

XP_031299199.1
type: Protein
SIO_000068: ncbiprotein

position:147049:-1
position: 147049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177050:-1
position: 177050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176965-177050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167800-167997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166824-166892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166178-166273:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:164128-164236:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:159616-159708:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:158943-159024:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155878-155948:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153174-153258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:151776-151913:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:151228-151308:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:150728-150834:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:150056-150196:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:149812-149883:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:149484-149562:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:148157-148244:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:147809-147920:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:147326-147442:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:147049-147135:-1:exon

GLB1L3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: GLB1L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(186681..235623)
location: region:186681-235623:-1
so has part: feature:186681-235623:-1:exon
subclass of: SO_0000010

105104235
type: Gene
SIO_000068: ncbigene

position:186681:-1
position: 186681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235623:-1
position: 235623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186681-235623:-1:exon

GLB1L3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GLB1L3
product: galactosidase beta 1 like 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031443310.1
SIO_010081: GLB1L3
subclass of: SO_0000673
so part of: GLB1L3
location: complement(join(186681..187039,187176..187292,188344..188455,188697..188784,189193..189271,189656..189727,190009..190149,190915..191021,191586..191666,192163..192300,193717..193801,202960..203024,203756..203837,205221..205313,206328..206436,230619..230714,231239..231307,235346..235623))
location: region:186681-235623:-1
so has part: feature:235346-235623:-1:exon
so has part: feature:231239-231307:-1:exon
so has part: feature:230619-230714:-1:exon
so has part: feature:206328-206436:-1:exon
so has part: feature:205221-205313:-1:exon
so has part: feature:203756-203837:-1:exon
so has part: feature:202960-203024:-1:exon
so has part: feature:193717-193801:-1:exon
so has part: feature:192163-192300:-1:exon
so has part: feature:191586-191666:-1:exon
so has part: feature:190915-191021:-1:exon
so has part: feature:190009-190149:-1:exon
so has part: feature:189656-189727:-1:exon
so has part: feature:189193-189271:-1:exon
so has part: feature:188697-188784:-1:exon
so has part: feature:188344-188455:-1:exon
so has part: feature:187176-187292:-1:exon
so has part: feature:186681-187039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235346-235623:-1:exon

position:235346:-1
position: 235346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231239-231307:-1:exon

position:231239:-1
position: 231239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231307:-1
position: 231307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:230619-230714:-1:exon

position:230619:-1
position: 230619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230714:-1
position: 230714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:206328-206436:-1:exon

position:206328:-1
position: 206328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206436:-1
position: 206436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:205221-205313:-1:exon

position:205221:-1
position: 205221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205313:-1
position: 205313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:203756-203837:-1:exon

position:203756:-1
position: 203756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203837:-1
position: 203837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:202960-203024:-1:exon

position:202960:-1
position: 202960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203024:-1
position: 203024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:193717-193801:-1:exon

position:193717:-1
position: 193717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193801:-1
position: 193801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:192163-192300:-1:exon

position:192163:-1
position: 192163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192300:-1
position: 192300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:191586-191666:-1:exon

position:191586:-1
position: 191586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191666:-1
position: 191666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:190915-191021:-1:exon

position:190915:-1
position: 190915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191021:-1
position: 191021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:190009-190149:-1:exon

position:190009:-1
position: 190009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190149:-1
position: 190149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:189656-189727:-1:exon

position:189656:-1
position: 189656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189727:-1
position: 189727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:189193-189271:-1:exon

position:189193:-1
position: 189193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189271:-1
position: 189271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:188697-188784:-1:exon

position:188697:-1
position: 188697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188784:-1
position: 188784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:188344-188455:-1:exon

position:188344:-1
position: 188344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188455:-1
position: 188455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:187176-187292:-1:exon

position:187176:-1
position: 187176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187292:-1
position: 187292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:186681-187039:-1:exon

position:187039:-1
position: 187039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GLB1L3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GLB1L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 3
translation: MATNTSSLSGRASTVPFFPAVRFNWSHLTPLELKDRSVGLQAEEGVGRNPYFTLEGHEFLIFGGSIHYFRVPREYWRDRLLKLRACGFNTVTTYVPWNLHEPESGKFDFSGNLDLEAFVLLAAEVGLWVILRPGPYVCSELDLGGLPSRLLQDPTTQLRTTNRTFVEAVDKYFDHLIARVVPLQYRKGGPIIAVQVENEYGSFNKDKNYMPYLHKALLERGVVELLLTSDNTNKVLNGHIKGVLATINMNSFRADTFEQLFKVQKNKPILIMEYWVGWFDTWGKRHTPTDAGDVENTVTEFIQLDISFNVYMFHGGTNFGFMNGGIHFTHYRAVITSYDYDAVLTEAGDYTDKYFKLRKLFQSVFVTPLPLLPKPTHKAVYPSMRPSLYLPLWDVLQYLNRPVVSRTPLNMENLPIHGGNGQAFGLVLYEATICSGGRLHVEARDAAQVFLNETSLGILADETQNVDVPTITECQLLRILVENQGRVNFSWKIQDQRKGIIGSVTINSVPLENFTIYSLEMRTSFFRRLRTAIWRPVSDDHLGPAFYLGTLKAGSSPRDTFLALPSWKYGFVFINGRNLGRYWNIGPQGTLYLPGAWLNPGNNEIILFEKRKSGSYIYSTDKPVL
SIO_010081: GLB1L3
subclass of: SO_0000673
so part of: GLB1L3
location: complement(join(186974..187039,187176..187292,188344..188455,188697..188784,189193..189271,189656..189727,190009..190149,190915..191021,191586..191666,192163..192300,193717..193801,202960..203024,203756..203837,205221..205313,206328..206436,230619..230714,231239..231307,235346..235623))
location: region:186974-235623:-1
so has part: feature:235346-235623:-1:exon
so has part: feature:231239-231307:-1:exon
so has part: feature:230619-230714:-1:exon
so has part: feature:206328-206436:-1:exon
so has part: feature:205221-205313:-1:exon
so has part: feature:203756-203837:-1:exon
so has part: feature:202960-203024:-1:exon
so has part: feature:193717-193801:-1:exon
so has part: feature:192163-192300:-1:exon
so has part: feature:191586-191666:-1:exon
so has part: feature:190915-191021:-1:exon
so has part: feature:190009-190149:-1:exon
so has part: feature:189656-189727:-1:exon
so has part: feature:189193-189271:-1:exon
so has part: feature:188697-188784:-1:exon
so has part: feature:188344-188455:-1:exon
so has part: feature:187176-187292:-1:exon
so has part: feature:186974-187039:-1:exon

XP_031299170.1
type: Protein
SIO_000068: ncbiprotein

position:186974:-1
position: 186974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235346-235623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231239-231307:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230619-230714:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206328-206436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205221-205313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203756-203837:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:202960-203024:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193717-193801:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:192163-192300:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:191586-191666:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:190915-191021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190009-190149:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:189656-189727:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:189193-189271:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:188697-188784:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:188344-188455:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:187176-187292:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:186974-187039:-1:exon

LOC105104229
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105104229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(243073..276418)
location: region:243073-276418:-1
so has part: feature:243073-276418:-1:exon
subclass of: SO_0000010

105104229
type: Gene
SIO_000068: ncbigene

position:243073:-1
position: 243073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276418:-1
position: 276418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243073-276418:-1:exon

LOC105104229
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105104229
product: beta-galactosidase-1-like protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031443344.1
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243073..243317,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275161,275646..276393))
location: region:243073-276393:-1
so has part: feature:275646-276393:-1:exon
so has part: feature:275069-275161:-1:exon
so has part: feature:274729-274926:-1:exon
so has part: feature:266694-266762:-1:exon
so has part: feature:265194-265289:-1:exon
so has part: feature:263859-263967:-1:exon
so has part: feature:261037-261129:-1:exon
so has part: feature:259906-259987:-1:exon
so has part: feature:258959-259023:-1:exon
so has part: feature:253040-253124:-1:exon
so has part: feature:252323-252460:-1:exon
so has part: feature:251601-251708:-1:exon
so has part: feature:250898-251004:-1:exon
so has part: feature:247459-247605:-1:exon
so has part: feature:246628-246699:-1:exon
so has part: feature:246066-246153:-1:exon
so has part: feature:245277-245364:-1:exon
so has part: feature:244844-244955:-1:exon
so has part: feature:244088-244204:-1:exon
so has part: feature:243920-243983:-1:exon
so has part: feature:243073-243317:-1:exon

position:276393:-1
position: 276393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275646-276393:-1:exon

position:275646:-1
position: 275646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:275069-275161:-1:exon

position:275069:-1
position: 275069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275161:-1
position: 275161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:274729-274926:-1:exon

position:274729:-1
position: 274729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274926:-1
position: 274926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:266694-266762:-1:exon

position:266694:-1
position: 266694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266762:-1
position: 266762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:265194-265289:-1:exon

position:265194:-1
position: 265194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265289:-1
position: 265289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:263859-263967:-1:exon

position:263859:-1
position: 263859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263967:-1
position: 263967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:261037-261129:-1:exon

position:261037:-1
position: 261037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261129:-1
position: 261129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:259906-259987:-1:exon

position:259906:-1
position: 259906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259987:-1
position: 259987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:258959-259023:-1:exon

position:258959:-1
position: 258959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259023:-1
position: 259023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:253040-253124:-1:exon

position:253040:-1
position: 253040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253124:-1
position: 253124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:252323-252460:-1:exon

position:252323:-1
position: 252323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252460:-1
position: 252460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:251601-251708:-1:exon

position:251601:-1
position: 251601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251708:-1
position: 251708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:250898-251004:-1:exon

position:250898:-1
position: 250898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251004:-1
position: 251004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:247459-247605:-1:exon

position:247459:-1
position: 247459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247605:-1
position: 247605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:246628-246699:-1:exon

position:246628:-1
position: 246628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246699:-1
position: 246699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:246066-246153:-1:exon

position:246066:-1
position: 246066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246153:-1
position: 246153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:245277-245364:-1:exon

position:245277:-1
position: 245277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245364:-1
position: 245364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:244844-244955:-1:exon

position:244844:-1
position: 244844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244955:-1
position: 244955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:244088-244204:-1:exon

position:244088:-1
position: 244088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244204:-1
position: 244204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:243920-243983:-1:exon

position:243920:-1
position: 243920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243983:-1
position: 243983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:243073-243317:-1:exon

position:243317:-1
position: 243317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105104229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105104229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X5
translation: MQTWGGGLRRRPVQGWGSKPRAGVRPPGELGAGLSPSADFPARGPPCRPAPRPRSPAGPRSARTLRSTPQREEKRGPHGRMQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTIPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGY
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243310..243317,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275161,275646..275884))
location: region:243310-275884:-1
so has part: feature:275646-275884:-1:exon
so has part: feature:275069-275161:-1:exon
so has part: feature:274729-274926:-1:exon
so has part: feature:266694-266762:-1:exon
so has part: feature:265194-265289:-1:exon
so has part: feature:263859-263967:-1:exon
so has part: feature:261037-261129:-1:exon
so has part: feature:259906-259987:-1:exon
so has part: feature:258959-259023:-1:exon
so has part: feature:253040-253124:-1:exon
so has part: feature:252323-252460:-1:exon
so has part: feature:251601-251708:-1:exon
so has part: feature:250898-251004:-1:exon
so has part: feature:247459-247605:-1:exon
so has part: feature:246628-246699:-1:exon
so has part: feature:246066-246153:-1:exon
so has part: feature:245277-245364:-1:exon
so has part: feature:244844-244955:-1:exon
so has part: feature:244088-244204:-1:exon
so has part: feature:243920-243983:-1:exon
so has part: feature:243310-243317:-1:exon

XP_031299204.1
type: Protein
SIO_000068: ncbiprotein

position:243310:-1
position: 243310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275884:-1
position: 275884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275646-275884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275069-275161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274729-274926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266694-266762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265194-265289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263859-263967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261037-261129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259906-259987:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258959-259023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253040-253124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252323-252460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:251601-251708:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250898-251004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247459-247605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246628-246699:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246066-246153:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245277-245364:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244844-244955:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:244088-244204:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:243920-243983:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:243310-243317:-1:exon

LOC105104229
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105104229
product: beta-galactosidase-1-like protein 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031443346.1
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243324..243608,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275161,276227..276418))
location: region:243324-276418:-1
so has part: feature:276227-276418:-1:exon
so has part: feature:275069-275161:-1:exon
so has part: feature:274729-274926:-1:exon
so has part: feature:266694-266762:-1:exon
so has part: feature:265194-265289:-1:exon
so has part: feature:263859-263967:-1:exon
so has part: feature:261037-261129:-1:exon
so has part: feature:259906-259987:-1:exon
so has part: feature:258959-259023:-1:exon
so has part: feature:253040-253124:-1:exon
so has part: feature:252323-252460:-1:exon
so has part: feature:251601-251708:-1:exon
so has part: feature:250898-251004:-1:exon
so has part: feature:247459-247605:-1:exon
so has part: feature:246628-246699:-1:exon
so has part: feature:246066-246153:-1:exon
so has part: feature:245277-245364:-1:exon
so has part: feature:244844-244955:-1:exon
so has part: feature:244088-244204:-1:exon
so has part: feature:243920-243983:-1:exon
so has part: feature:243324-243608:-1:exon

position:243324:-1
position: 243324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276227-276418:-1:exon

position:276227:-1
position: 276227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:275069-275161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274729-274926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266694-266762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265194-265289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263859-263967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261037-261129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259906-259987:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258959-259023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253040-253124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252323-252460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:251601-251708:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250898-251004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247459-247605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246628-246699:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246066-246153:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245277-245364:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244844-244955:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:244088-244204:-1:exon

urn:…
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position:243608:-1
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type: ReverseStrandPosition
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LOC105104229
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105104229
product: beta-galactosidase-1-like protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031443341.1
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243324..243608,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275161,275957..276418))
location: region:243324-276418:-1
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LOC105104229
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105104229
product: beta-galactosidase-1-like protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031443343.1
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243324..243608,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275161,275646..276399))
location: region:243324-276399:-1
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position:276399:-1
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LOC105104229
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105104229
product: beta-galactosidase-1-like protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031443340.1
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243324..243608,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275161,275646..276397))
location: region:243324-276397:-1
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LOC105104229
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105104229
product: beta-galactosidase-1-like protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031443345.1
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243324..243608,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275161,276103..276395))
location: region:243324-276395:-1
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LOC105104229
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105104229
product: beta-galactosidase-1-like protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031443342.1
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243324..243608,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275161,275274..275787))
location: region:243324-275787:-1
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LOC105104229
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105104229
product: beta-galactosidase-1-like protein 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031443347.1
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243324..243608,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274819,275069..275161))
location: region:243324-275161:-1
so has part: feature:275069-275161:-1:exon
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so has part: feature:253040-253124:-1:exon
so has part: feature:252323-252460:-1:exon
so has part: feature:251601-251708:-1:exon
so has part: feature:250898-251004:-1:exon
so has part: feature:247459-247605:-1:exon
so has part: feature:246628-246699:-1:exon
so has part: feature:246066-246153:-1:exon
so has part: feature:245277-245364:-1:exon
so has part: feature:244844-244955:-1:exon
so has part: feature:244088-244204:-1:exon
so has part: feature:243920-243983:-1:exon
so has part: feature:243324-243608:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275069-275161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274729-274819:-1:exon

position:274819:-1
position: 274819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:266694-266762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265194-265289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263859-263967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:261037-261129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:259906-259987:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:258959-259023:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253040-253124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:252323-252460:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251601-251708:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250898-251004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247459-247605:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:246628-246699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246066-246153:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:245277-245364:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:244844-244955:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244088-244204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:243920-243983:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:243324-243608:-1:exon

LOC105104229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105104229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X2
translation: MSALRAGTWRPRRGREESRPVGGRGPCGPEPAEGVRERPRGGMQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTIPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWGPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243424..243608,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275161,275957..276081))
location: region:243424-276081:-1
so has part: feature:275957-276081:-1:exon
so has part: feature:275069-275161:-1:exon
so has part: feature:274729-274926:-1:exon
so has part: feature:266694-266762:-1:exon
so has part: feature:265194-265289:-1:exon
so has part: feature:263859-263967:-1:exon
so has part: feature:261037-261129:-1:exon
so has part: feature:259906-259987:-1:exon
so has part: feature:258959-259023:-1:exon
so has part: feature:253040-253124:-1:exon
so has part: feature:252323-252460:-1:exon
so has part: feature:251601-251708:-1:exon
so has part: feature:250898-251004:-1:exon
so has part: feature:247459-247605:-1:exon
so has part: feature:246628-246699:-1:exon
so has part: feature:246066-246153:-1:exon
so has part: feature:245277-245364:-1:exon
so has part: feature:244844-244955:-1:exon
so has part: feature:244088-244204:-1:exon
so has part: feature:243920-243983:-1:exon
so has part: feature:243424-243608:-1:exon

XP_031299201.1
type: Protein
SIO_000068: ncbiprotein

position:243424:-1
position: 243424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276081:-1
position: 276081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275957-276081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275069-275161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274729-274926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266694-266762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265194-265289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263859-263967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261037-261129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259906-259987:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258959-259023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253040-253124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252323-252460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:251601-251708:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250898-251004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247459-247605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246628-246699:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246066-246153:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245277-245364:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244844-244955:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:244088-244204:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:243920-243983:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:243424-243608:-1:exon

LOC105104229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105104229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X4
translation: MQTWGGGLRRRPVQGWGSKPRAGVRPPGELGAGLSPSADFPARGPPCRPAPRPRSPAGPRSARTLRSTPQREEKRGPHGRMQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHHYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTIPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWGPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243424..243608,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275161,275646..275884))
location: region:243424-275884:-1
so has part: feature:275646-275884:-1:exon
so has part: feature:275069-275161:-1:exon
so has part: feature:274729-274926:-1:exon
so has part: feature:266694-266762:-1:exon
so has part: feature:265194-265289:-1:exon
so has part: feature:263859-263967:-1:exon
so has part: feature:261037-261129:-1:exon
so has part: feature:259906-259987:-1:exon
so has part: feature:258959-259023:-1:exon
so has part: feature:253040-253124:-1:exon
so has part: feature:251601-251708:-1:exon
so has part: feature:250898-251004:-1:exon
so has part: feature:247459-247605:-1:exon
so has part: feature:246628-246699:-1:exon
so has part: feature:246066-246153:-1:exon
so has part: feature:245277-245364:-1:exon
so has part: feature:244844-244955:-1:exon
so has part: feature:244088-244204:-1:exon
so has part: feature:243920-243983:-1:exon
so has part: feature:243424-243608:-1:exon

XP_031299203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275646-275884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275069-275161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274729-274926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266694-266762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265194-265289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263859-263967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261037-261129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259906-259987:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258959-259023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253040-253124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251601-251708:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250898-251004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247459-247605:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:246628-246699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246066-246153:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:245277-245364:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:244844-244955:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244088-244204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:243920-243983:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:243424-243608:-1:exon

LOC105104229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105104229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X1
translation: MQTWGGGLRRRPVQGWGSKPRAGVRPPGELGAGLSPSADFPARGPPCRPAPRPRSPAGPRSARTLRSTPQREEKRGPHGRMQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTIPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWGPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243424..243608,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275161,275646..275884))
location: region:243424-275884:-1
so has part: feature:275646-275884:-1:exon
so has part: feature:275069-275161:-1:exon
so has part: feature:274729-274926:-1:exon
so has part: feature:266694-266762:-1:exon
so has part: feature:265194-265289:-1:exon
so has part: feature:263859-263967:-1:exon
so has part: feature:261037-261129:-1:exon
so has part: feature:259906-259987:-1:exon
so has part: feature:258959-259023:-1:exon
so has part: feature:253040-253124:-1:exon
so has part: feature:252323-252460:-1:exon
so has part: feature:251601-251708:-1:exon
so has part: feature:250898-251004:-1:exon
so has part: feature:247459-247605:-1:exon
so has part: feature:246628-246699:-1:exon
so has part: feature:246066-246153:-1:exon
so has part: feature:245277-245364:-1:exon
so has part: feature:244844-244955:-1:exon
so has part: feature:244088-244204:-1:exon
so has part: feature:243920-243983:-1:exon
so has part: feature:243424-243608:-1:exon

XP_031299200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275646-275884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275069-275161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274729-274926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266694-266762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265194-265289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263859-263967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261037-261129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259906-259987:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258959-259023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253040-253124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252323-252460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:251601-251708:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250898-251004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247459-247605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246628-246699:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246066-246153:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245277-245364:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244844-244955:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:244088-244204:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:243920-243983:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:243424-243608:-1:exon

LOC105104229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105104229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X3
translation: MQLSRSGQQTGPRGAPARVQAPQKPKTAAQNSAFRMQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTIPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWGPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243424..243608,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275161,275274..275377))
location: region:243424-275377:-1
so has part: feature:275274-275377:-1:exon
so has part: feature:275069-275161:-1:exon
so has part: feature:274729-274926:-1:exon
so has part: feature:266694-266762:-1:exon
so has part: feature:265194-265289:-1:exon
so has part: feature:263859-263967:-1:exon
so has part: feature:261037-261129:-1:exon
so has part: feature:259906-259987:-1:exon
so has part: feature:258959-259023:-1:exon
so has part: feature:253040-253124:-1:exon
so has part: feature:252323-252460:-1:exon
so has part: feature:251601-251708:-1:exon
so has part: feature:250898-251004:-1:exon
so has part: feature:247459-247605:-1:exon
so has part: feature:246628-246699:-1:exon
so has part: feature:246066-246153:-1:exon
so has part: feature:245277-245364:-1:exon
so has part: feature:244844-244955:-1:exon
so has part: feature:244088-244204:-1:exon
so has part: feature:243920-243983:-1:exon
so has part: feature:243424-243608:-1:exon

XP_031299202.1
type: Protein
SIO_000068: ncbiprotein

position:275377:-1
position: 275377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275274-275377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275069-275161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274729-274926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266694-266762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265194-265289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263859-263967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261037-261129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259906-259987:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258959-259023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253040-253124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252323-252460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:251601-251708:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250898-251004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247459-247605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246628-246699:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246066-246153:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245277-245364:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244844-244955:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:244088-244204:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:243920-243983:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:243424-243608:-1:exon

LOC105104229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105104229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X6
translation: MQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTIPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWGPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243424..243608,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275160))
location: region:243424-275160:-1
so has part: feature:275069-275160:-1:exon
so has part: feature:274729-274926:-1:exon
so has part: feature:266694-266762:-1:exon
so has part: feature:265194-265289:-1:exon
so has part: feature:263859-263967:-1:exon
so has part: feature:261037-261129:-1:exon
so has part: feature:259906-259987:-1:exon
so has part: feature:258959-259023:-1:exon
so has part: feature:253040-253124:-1:exon
so has part: feature:252323-252460:-1:exon
so has part: feature:251601-251708:-1:exon
so has part: feature:250898-251004:-1:exon
so has part: feature:247459-247605:-1:exon
so has part: feature:246628-246699:-1:exon
so has part: feature:246066-246153:-1:exon
so has part: feature:245277-245364:-1:exon
so has part: feature:244844-244955:-1:exon
so has part: feature:244088-244204:-1:exon
so has part: feature:243920-243983:-1:exon
so has part: feature:243424-243608:-1:exon

XP_031299205.1
type: Protein
SIO_000068: ncbiprotein

position:275160:-1
position: 275160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275069-275160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274729-274926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266694-266762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265194-265289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263859-263967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:261037-261129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:259906-259987:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:258959-259023:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253040-253124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:252323-252460:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251601-251708:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250898-251004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247459-247605:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:246628-246699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246066-246153:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:245277-245364:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:244844-244955:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244088-244204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:243920-243983:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:243424-243608:-1:exon

LOC105104229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105104229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X6
translation: MQTLLVRLVALLGLMSRLLETSALTGAPWGRASRVFLSPSQVKDRRLGLKVKDSNFTLGGFPSLILAGTIHYFRVPKEYWRDRLLKLKACGFNTVTTHVPWNLHEPRRGQFQFTGNLDLAVFISMALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTIPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWGPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243424..243608,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275160))
location: region:243424-275160:-1
so has part: feature:275069-275160:-1:exon
so has part: feature:274729-274926:-1:exon
so has part: feature:266694-266762:-1:exon
so has part: feature:265194-265289:-1:exon
so has part: feature:263859-263967:-1:exon
so has part: feature:261037-261129:-1:exon
so has part: feature:259906-259987:-1:exon
so has part: feature:258959-259023:-1:exon
so has part: feature:253040-253124:-1:exon
so has part: feature:252323-252460:-1:exon
so has part: feature:251601-251708:-1:exon
so has part: feature:250898-251004:-1:exon
so has part: feature:247459-247605:-1:exon
so has part: feature:246628-246699:-1:exon
so has part: feature:246066-246153:-1:exon
so has part: feature:245277-245364:-1:exon
so has part: feature:244844-244955:-1:exon
so has part: feature:244088-244204:-1:exon
so has part: feature:243920-243983:-1:exon
so has part: feature:243424-243608:-1:exon

XP_031299206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275069-275160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274729-274926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266694-266762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265194-265289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263859-263967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:261037-261129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:259906-259987:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:258959-259023:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253040-253124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:252323-252460:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251601-251708:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250898-251004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247459-247605:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:246628-246699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246066-246153:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:245277-245364:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:244844-244955:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244088-244204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:243920-243983:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:243424-243608:-1:exon

LOC105104229
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105104229
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactosidase-1-like protein 2 isoform X7
translation: MALEVDLWVILCPGPYIGSDLDLGGLPSWLLRDPKMKLRTTYKGFTKAVNHYFDELIPRIVSLQVQEDGPIIAVQLENEYGSYHMDKKYMPYVKKALVTRGVKTLLMTADTGQDLTGGHVKNVLATLHLRSINKATYETLSSFQGPSPVLMTVYTASAPDGWGALRHSLDPHLVMRDAREMLAFRFSLNFYMFHGGTNFGFMGGSAPLHNYLSTVTSYDYGALLTEDGDYTPEYVTFQELFRSVTVPSHNLSPNEVHRPPQPESRPRVVYKPVAATYYMSLWDALPYLDEPTLSAKPVSMEKLSVNQGSGQSSGYILYETAISSGGLLTSRGHVQDRGQVFLDNLYIGVLDHASTELTIPRRSDYEGSQMLRILVENQGRLAYGPDINKERKGLTGDIYLNKSPLRKFKIYSLEMKPKFIQRDLPNIWKPALFQPRGPAFFLGLLRVGDHPRDTFIKMQDWTKGVIFINGQNLGRYWNIGPQETLYLPGPWLQPGANEIVVFEEWKSALVIQFTDSPQLGHVSWDSPRCHGQRMQGPAPPGTYALFCQVGAWGPCTQPPTLLLSGAGSRYASGESPHPFR
SIO_010081: LOC105104229
subclass of: SO_0000673
so part of: LOC105104229
location: complement(join(243424..243608,243920..243983,244088..244204,244844..244955,245277..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265276))
location: region:243424-265276:-1
so has part: feature:265194-265276:-1:exon
so has part: feature:263859-263967:-1:exon
so has part: feature:261037-261129:-1:exon
so has part: feature:259906-259987:-1:exon
so has part: feature:258959-259023:-1:exon
so has part: feature:253040-253124:-1:exon
so has part: feature:252323-252460:-1:exon
so has part: feature:251601-251708:-1:exon
so has part: feature:250898-251004:-1:exon
so has part: feature:247459-247605:-1:exon
so has part: feature:246628-246699:-1:exon
so has part: feature:246066-246153:-1:exon
so has part: feature:245277-245364:-1:exon
so has part: feature:244844-244955:-1:exon
so has part: feature:244088-244204:-1:exon
so has part: feature:243920-243983:-1:exon
so has part: feature:243424-243608:-1:exon

XP_031299207.1
type: Protein
SIO_000068: ncbiprotein

position:265276:-1
position: 265276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265194-265276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263859-263967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261037-261129:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259906-259987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258959-259023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253040-253124:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:252323-252460:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251601-251708:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:250898-251004:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:247459-247605:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:246628-246699:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:246066-246153:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245277-245364:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:244844-244955:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:244088-244204:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:243920-243983:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:243424-243608:-1:exon

LOC105104229
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: LOC105104229
product: beta-galactosidase-1-like protein 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004133792.1
SIO_010081: LOC105104229
so part of: LOC105104229
location: complement(join(244818..244955,245141..245364,246066..246153,246628..246699,247459..247605,250898..251004,251601..251708,252323..252460,253040..253124,258959..259023,259906..259987,261037..261129,263859..263967,265194..265289,266694..266762,274729..274926,275069..275161,275646..276397))
location: region:244818-276397:-1
so has part: feature:275646-276397:-1:exon
so has part: feature:275069-275161:-1:exon
so has part: feature:274729-274926:-1:exon
so has part: feature:266694-266762:-1:exon
so has part: feature:265194-265289:-1:exon
so has part: feature:263859-263967:-1:exon
so has part: feature:261037-261129:-1:exon
so has part: feature:259906-259987:-1:exon
so has part: feature:258959-259023:-1:exon
so has part: feature:253040-253124:-1:exon
so has part: feature:252323-252460:-1:exon
so has part: feature:251601-251708:-1:exon
so has part: feature:250898-251004:-1:exon
so has part: feature:247459-247605:-1:exon
so has part: feature:246628-246699:-1:exon
so has part: feature:246066-246153:-1:exon
so has part: feature:245141-245364:-1:exon
so has part: feature:244818-244955:-1:exon

position:244818:-1
position: 244818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275646-276397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275069-275161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274729-274926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266694-266762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265194-265289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263859-263967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261037-261129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259906-259987:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258959-259023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253040-253124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252323-252460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:251601-251708:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250898-251004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247459-247605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246628-246699:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246066-246153:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245141-245364:-1:exon

position:245141:-1
position: 245141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:244818-244955:-1:exon

ACAD8
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ACAD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(287191..305508)
location: region:287191-305508:-1
so has part: feature:287191-305508:-1:exon
subclass of: SO_0000010

105104234
type: Gene
SIO_000068: ncbigene

position:287191:-1
position: 287191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305508:-1
position: 305508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287191-305508:-1:exon

ACAD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ACAD8
product: acyl-CoA dehydrogenase family member 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_031443349.1
SIO_010081: ACAD8
subclass of: SO_0000673
so part of: ACAD8
location: complement(join(287191..288584,290205..290307,290849..291001,296981..297078,297166..297301,299370..299507,299826..299902,300328..300437,301024..301193,301639..301739,305313..305506))
location: region:287191-305506:-1
so has part: feature:305313-305506:-1:exon
so has part: feature:301639-301739:-1:exon
so has part: feature:301024-301193:-1:exon
so has part: feature:300328-300437:-1:exon
so has part: feature:299826-299902:-1:exon
so has part: feature:299370-299507:-1:exon
so has part: feature:297166-297301:-1:exon
so has part: feature:296981-297078:-1:exon
so has part: feature:290849-291001:-1:exon
so has part: feature:290205-290307:-1:exon
so has part: feature:287191-288584:-1:exon

position:305506:-1
position: 305506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305313-305506:-1:exon

position:305313:-1
position: 305313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301639-301739:-1:exon

position:301639:-1
position: 301639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301739:-1
position: 301739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301024-301193:-1:exon

position:301024:-1
position: 301024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301193:-1
position: 301193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:300328-300437:-1:exon

position:300328:-1
position: 300328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300437:-1
position: 300437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:299826-299902:-1:exon

position:299826:-1
position: 299826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299902:-1
position: 299902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:299370-299507:-1:exon

position:299370:-1
position: 299370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299507:-1
position: 299507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:297166-297301:-1:exon

position:297166:-1
position: 297166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297301:-1
position: 297301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:296981-297078:-1:exon

position:296981:-1
position: 296981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297078:-1
position: 297078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:290849-291001:-1:exon

position:290849:-1
position: 290849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291001:-1
position: 291001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:290205-290307:-1:exon

position:290205:-1
position: 290205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290307:-1
position: 290307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:287191-288584:-1:exon

position:288584:-1
position: 288584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACAD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ACAD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isobutyryl-CoA dehydrogenase, mitochondrial isoform X2
translation: MLRDSCWRVGARLCFLRAGVRAAAESGRRALVSCIDPSIGLNEEQKEFQKVAFNFAAREMAPHTAEWDQKELFPVDVMRKAAQLGFGGVYMRTDVGGSGLSRLDASVIFEALATGCTSTTAYISIHNMCAWMIDAFGSEEQRHRFCPPLCAMEKFASYCLTEPGSGSDAASLLTSAKRQGDHYVLNGTKAFISGGGEADTYVVMCRTGGPGPKGISCVVVEKGAPGLSFGKKEKKMGWNSQPTRAVIFEDCAVPVANRIGAEGQGFLIAMQGLNGGRVNIASCSLGAAHASVILARDHLKIRKQFGVPLANNQYLQFKLADMATRLVASRMMIRSAAVALQEEREDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYVVQQYVRDTRVHQILEGSNEVMRMLVSRSLLQE
SIO_010081: ACAD8
subclass of: SO_0000673
so part of: ACAD8
location: complement(join(288532..288584,290205..290307,290849..291001,296981..297078,297166..297301,299370..299507,299826..299902,300328..300437,301024..301193,301639..301739,305313..305421))
location: region:288532-305421:-1
so has part: feature:305313-305421:-1:exon
so has part: feature:301639-301739:-1:exon
so has part: feature:301024-301193:-1:exon
so has part: feature:300328-300437:-1:exon
so has part: feature:299826-299902:-1:exon
so has part: feature:299370-299507:-1:exon
so has part: feature:297166-297301:-1:exon
so has part: feature:296981-297078:-1:exon
so has part: feature:290849-291001:-1:exon
so has part: feature:290205-290307:-1:exon
so has part: feature:288532-288584:-1:exon

XP_031299209.1
type: Protein
SIO_000068: ncbiprotein

position:288532:-1
position: 288532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305421:-1
position: 305421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305313-305421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301639-301739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301024-301193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300328-300437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299826-299902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299370-299507:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:297166-297301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296981-297078:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290849-291001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:290205-290307:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:288532-288584:-1:exon

ACAD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ACAD8
product: acyl-CoA dehydrogenase family member 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_031443348.1
SIO_010081: ACAD8
subclass of: SO_0000673
so part of: ACAD8
location: complement(join(288963..290088,290205..290307,290849..291001,296981..297078,297166..297301,299370..299507,299826..299902,300328..300437,301024..301193,301639..301739,305313..305508))
location: region:288963-305508:-1
so has part: feature:305313-305508:-1:exon
so has part: feature:301639-301739:-1:exon
so has part: feature:301024-301193:-1:exon
so has part: feature:300328-300437:-1:exon
so has part: feature:299826-299902:-1:exon
so has part: feature:299370-299507:-1:exon
so has part: feature:297166-297301:-1:exon
so has part: feature:296981-297078:-1:exon
so has part: feature:290849-291001:-1:exon
so has part: feature:290205-290307:-1:exon
so has part: feature:288963-290088:-1:exon

position:288963:-1
position: 288963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305313-305508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301639-301739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301024-301193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300328-300437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299826-299902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299370-299507:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:297166-297301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296981-297078:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290849-291001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:290205-290307:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:288963-290088:-1:exon

position:290088:-1
position: 290088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACAD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ACAD8
product: acyl-CoA dehydrogenase family member 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_031443350.1
SIO_010081: ACAD8
subclass of: SO_0000673
so part of: ACAD8
location: complement(join(288963..290088,290205..290307,290849..291001,296981..297078,297166..297301,299370..299507,299826..299902,300328..300437,301024..301193,301639..301739,305024..305295))
location: region:288963-305295:-1
so has part: feature:305024-305295:-1:exon
so has part: feature:301639-301739:-1:exon
so has part: feature:301024-301193:-1:exon
so has part: feature:300328-300437:-1:exon
so has part: feature:299826-299902:-1:exon
so has part: feature:299370-299507:-1:exon
so has part: feature:297166-297301:-1:exon
so has part: feature:296981-297078:-1:exon
so has part: feature:290849-291001:-1:exon
so has part: feature:290205-290307:-1:exon
so has part: feature:288963-290088:-1:exon

position:305295:-1
position: 305295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305024-305295:-1:exon

position:305024:-1
position: 305024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301639-301739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301024-301193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300328-300437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299826-299902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299370-299507:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:297166-297301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296981-297078:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290849-291001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:290205-290307:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:288963-290088:-1:exon

ACAD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ACAD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isobutyryl-CoA dehydrogenase, mitochondrial isoform X1
translation: MLRDSCWRVGARLCFLRAGVRAAAESGRRALVSCIDPSIGLNEEQKEFQKVAFNFAAREMAPHTAEWDQKELFPVDVMRKAAQLGFGGVYMRTDVGGSGLSRLDASVIFEALATGCTSTTAYISIHNMCAWMIDAFGSEEQRHRFCPPLCAMEKFASYCLTEPGSGSDAASLLTSAKRQGDHYVLNGTKAFISGGGEADTYVVMCRTGGPGPKGISCVVVEKGAPGLSFGKKEKKMGWNSQPTRAVIFEDCAVPVANRIGAEGQGFLIAMQGLNGGRVNIASCSLGAAHASVILARDHLKIRKQFGVPLANNQYLQFKLADMATRLVASRMMIRSAAVALQEEREDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYVVQQYVRDTRVHQILEGRPALSPRAGHWRPHCCSPPHFWRLRLRSILETAAGTALHCYETLGPWGPRTSVQ
SIO_010081: ACAD8
subclass of: SO_0000673
so part of: ACAD8
location: complement(join(289922..290088,290205..290307,290849..291001,296981..297078,297166..297301,299370..299507,299826..299902,300328..300437,301024..301193,301639..301739,305313..305421))
location: region:289922-305421:-1
so has part: feature:305313-305421:-1:exon
so has part: feature:301639-301739:-1:exon
so has part: feature:301024-301193:-1:exon
so has part: feature:300328-300437:-1:exon
so has part: feature:299826-299902:-1:exon
so has part: feature:299370-299507:-1:exon
so has part: feature:297166-297301:-1:exon
so has part: feature:296981-297078:-1:exon
so has part: feature:290849-291001:-1:exon
so has part: feature:290205-290307:-1:exon
so has part: feature:289922-290088:-1:exon

XP_031299208.1
type: Protein
SIO_000068: ncbiprotein

position:289922:-1
position: 289922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305313-305421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301639-301739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301024-301193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300328-300437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299826-299902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299370-299507:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:297166-297301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296981-297078:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290849-291001:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:290205-290307:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:289922-290088:-1:exon

ACAD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ACAD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isobutyryl-CoA dehydrogenase, mitochondrial isoform X3
translation: MAPHTAEWDQKELFPVDVMRKAAQLGFGGVYMRTDVGGSGLSRLDASVIFEALATGCTSTTAYISIHNMCAWMIDAFGSEEQRHRFCPPLCAMEKFASYCLTEPGSGSDAASLLTSAKRQGDHYVLNGTKAFISGGGEADTYVVMCRTGGPGPKGISCVVVEKGAPGLSFGKKEKKMGWNSQPTRAVIFEDCAVPVANRIGAEGQGFLIAMQGLNGGRVNIASCSLGAAHASVILARDHLKIRKQFGVPLANNQYLQFKLADMATRLVASRMMIRSAAVALQEEREDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYVVQQYVRDTRVHQILEGRPALSPRAGHWRPHCCSPPHFWRLRLRSILETAAGTALHCYETLGPWGPRTSVQ
SIO_010081: ACAD8
subclass of: SO_0000673
so part of: ACAD8
location: complement(join(289922..290088,290205..290307,290849..291001,296981..297078,297166..297301,299370..299507,299826..299902,300328..300437,301024..301193,301639..301671))
location: region:289922-301671:-1
so has part: feature:301639-301671:-1:exon
so has part: feature:301024-301193:-1:exon
so has part: feature:300328-300437:-1:exon
so has part: feature:299826-299902:-1:exon
so has part: feature:299370-299507:-1:exon
so has part: feature:297166-297301:-1:exon
so has part: feature:296981-297078:-1:exon
so has part: feature:290849-291001:-1:exon
so has part: feature:290205-290307:-1:exon
so has part: feature:289922-290088:-1:exon

XP_031299210.1
type: Protein
SIO_000068: ncbiprotein

position:301671:-1
position: 301671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301639-301671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301024-301193:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300328-300437:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299826-299902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299370-299507:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297166-297301:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296981-297078:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:290849-291001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290205-290307:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289922-290088:-1:exon

THYN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: THYN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 305657..309885
location: region:305657-309885:1
so has part: feature:305657-309885:1:exon
subclass of: SO_0000010

105104226
type: Gene
SIO_000068: ncbigene

position:305657:1
position: 305657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309885:1
position: 309885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305657-309885:1:exon

THYN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: THYN1
product: thymocyte nuclear protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_010997909.2
SIO_010081: THYN1
subclass of: SO_0000673
so part of: THYN1
location: join(305657..305899,307244..307425,308171..308239,308549..308641,309061..309156,309391..309541,309729..309885)
location: region:305657-309885:1
so has part: feature:305657-305899:1:exon
so has part: feature:307244-307425:1:exon
so has part: feature:308171-308239:1:exon
so has part: feature:308549-308641:1:exon
so has part: feature:309061-309156:1:exon
so has part: feature:309391-309541:1:exon
so has part: feature:309729-309885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305657-305899:1:exon

position:305899:1
position: 305899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307244-307425:1:exon

position:307244:1
position: 307244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307425:1
position: 307425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308171-308239:1:exon

position:308171:1
position: 308171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308239:1
position: 308239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:308549-308641:1:exon

position:308549:1
position: 308549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308641:1
position: 308641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:309061-309156:1:exon

position:309061:1
position: 309061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309156:1
position: 309156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:309391-309541:1:exon

position:309391:1
position: 309391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309541:1
position: 309541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:309729-309885:1:exon

position:309729:1
position: 309729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

THYN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: THYN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thymocyte nuclear protein 1
translation: MPRPRKRLAGAAGPDKKGPEGKRAKTEAPGEALAKVENSSLQKTSASKDCGENLSRYWLMKSEPESRLEKGVDVKFSIEDLKAQPEQTACWDGVRNYQARNFLRAMKLEEAAFFYHSNCREPGIAGLMKIVKEAYPDHTQFEKNSPHYDPSSKEDNPKWSMVDVQFVRMMKRFIPLAELRTHHQAHRATGGPLKNMALFTRQRLSVQPLTREEFDFILSLEEEEPT
SIO_010081: THYN1
subclass of: SO_0000673
so part of: THYN1
location: join(305857..305899,307244..307425,308171..308239,308549..308641,309061..309156,309391..309541,309729..309775)
location: region:305857-309775:1
so has part: feature:305857-305899:1:exon
so has part: feature:307244-307425:1:exon
so has part: feature:308171-308239:1:exon
so has part: feature:308549-308641:1:exon
so has part: feature:309061-309156:1:exon
so has part: feature:309391-309541:1:exon
so has part: feature:309729-309775:1:exon

XP_010996211.1
type: Protein
SIO_000068: ncbiprotein

position:305857:1
position: 305857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309775:1
position: 309775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305857-305899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:307244-307425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308171-308239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308549-308641:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309061-309156:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:309391-309541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:309729-309775:1:exon

VPS26B
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: VPS26B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(310278..328657)
location: region:310278-328657:-1
so has part: feature:310278-328657:-1:exon
subclass of: SO_0000010

105104225
type: Gene
SIO_000068: ncbigene

position:310278:-1
position: 310278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328657:-1
position: 328657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310278-328657:-1:exon

VPS26B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: VPS26B
product: VPS26, retromer complex component B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031443351.1
SIO_010081: VPS26B
subclass of: SO_0000673
so part of: VPS26B
location: complement(join(310278..312301,312653..312795,314217..314392,316484..316648,320587..320743,321892..321896,328239..328657))
location: region:310278-328657:-1
so has part: feature:328239-328657:-1:exon
so has part: feature:321892-321896:-1:exon
so has part: feature:320587-320743:-1:exon
so has part: feature:316484-316648:-1:exon
so has part: feature:314217-314392:-1:exon
so has part: feature:312653-312795:-1:exon
so has part: feature:310278-312301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328239-328657:-1:exon

position:328239:-1
position: 328239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:321892-321896:-1:exon

position:321892:-1
position: 321892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321896:-1
position: 321896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:320587-320743:-1:exon

position:320587:-1
position: 320587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320743:-1
position: 320743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:316484-316648:-1:exon

position:316484:-1
position: 316484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316648:-1
position: 316648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:314217-314392:-1:exon

position:314217:-1
position: 314217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314392:-1
position: 314392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:312653-312795:-1:exon

position:312653:-1
position: 312653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312795:-1
position: 312795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:310278-312301:-1:exon

position:312301:-1
position: 312301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS26B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: VPS26B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 26B
translation: MSFFGXGASVEVDILLNDADSRKRAEHKTEDGKKDKYFLFYDGETVSGKVSLALKNPNKRLEHQGIKVEFIGHIELYYDRGNHHEFVSLVKDLARPGEITQSQAFDFEFTHVEKPYESYTGQNVKLRYFLRATISRRLNDVVKETDIVVHTLSTYPELNSSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVRGESIPIRLFLAGYELTPTMRDINKKFSVRYYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSHQAAIASQRFEGTTSLGEVRTPGQLSDGNSRQ
SIO_010081: VPS26B
subclass of: SO_0000673
so part of: VPS26B
location: complement(join(312155..312301,312653..312795,314217..314392,316484..316648,320587..320743,321892..321896,328239..328456))
location: region:312155-328456:-1
so has part: feature:328239-328456:-1:exon
so has part: feature:321892-321896:-1:exon
so has part: feature:320587-320743:-1:exon
so has part: feature:316484-316648:-1:exon
so has part: feature:314217-314392:-1:exon
so has part: feature:312653-312795:-1:exon
so has part: feature:312155-312301:-1:exon

XP_031299211.1
type: Protein
SIO_000068: ncbiprotein

position:312155:-1
position: 312155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328456:-1
position: 328456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328239-328456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321892-321896:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320587-320743:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:316484-316648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:314217-314392:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312653-312795:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312155-312301:-1:exon

NCAPD3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: NCAPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 329285..396464
location: region:329285-396464:1
so has part: feature:329285-396464:1:exon
subclass of: SO_0000010

105104233
type: Gene
SIO_000068: ncbigene

position:329285:1
position: 329285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396464:1
position: 396464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329285-396464:1:exon

NCAPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NCAPD3
product: non-SMC condensin II complex subunit D3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031443353.1
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(329285..329409,331996..332150,335046..335208,339416..339600,340206..340373,340478..340539,340724..340811,342457..342590,343787..343859,344631..344756,344885..345137,345541..345597,345827..345916,351007..351080,351585..351719,352476..352696,357971..358162,358460..358557,358651..358766,361794..361901,363889..364003,364106..364213,367526..367764,368456..368535,371510..371647,371784..371917,372029..372228,374437..374547,376044..376217,376568..376683,376790..376929,377608..377685,379817..379891,379973..380033,395521..396464)
location: region:329285-396464:1
so has part: feature:329285-329409:1:exon
so has part: feature:331996-332150:1:exon
so has part: feature:335046-335208:1:exon
so has part: feature:339416-339600:1:exon
so has part: feature:340206-340373:1:exon
so has part: feature:340478-340539:1:exon
so has part: feature:340724-340811:1:exon
so has part: feature:342457-342590:1:exon
so has part: feature:343787-343859:1:exon
so has part: feature:344631-344756:1:exon
so has part: feature:344885-345137:1:exon
so has part: feature:345541-345597:1:exon
so has part: feature:345827-345916:1:exon
so has part: feature:351007-351080:1:exon
so has part: feature:351585-351719:1:exon
so has part: feature:352476-352696:1:exon
so has part: feature:357971-358162:1:exon
so has part: feature:358460-358557:1:exon
so has part: feature:358651-358766:1:exon
so has part: feature:361794-361901:1:exon
so has part: feature:363889-364003:1:exon
so has part: feature:364106-364213:1:exon
so has part: feature:367526-367764:1:exon
so has part: feature:368456-368535:1:exon
so has part: feature:371510-371647:1:exon
so has part: feature:371784-371917:1:exon
so has part: feature:372029-372228:1:exon
so has part: feature:374437-374547:1:exon
so has part: feature:376044-376217:1:exon
so has part: feature:376568-376683:1:exon
so has part: feature:376790-376929:1:exon
so has part: feature:377608-377685:1:exon
so has part: feature:379817-379891:1:exon
so has part: feature:379973-380033:1:exon
so has part: feature:395521-396464:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329285-329409:1:exon

position:329409:1
position: 329409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:331996-332150:1:exon

position:331996:1
position: 331996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332150:1
position: 332150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:335046-335208:1:exon

position:335046:1
position: 335046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335208:1
position: 335208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:339416-339600:1:exon

position:339416:1
position: 339416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339600:1
position: 339600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:340206-340373:1:exon

position:340206:1
position: 340206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340373:1
position: 340373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:340478-340539:1:exon

position:340478:1
position: 340478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340539:1
position: 340539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:340724-340811:1:exon

position:340724:1
position: 340724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340811:1
position: 340811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:342457-342590:1:exon

position:342457:1
position: 342457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342590:1
position: 342590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:343787-343859:1:exon

position:343787:1
position: 343787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343859:1
position: 343859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:344631-344756:1:exon

position:344631:1
position: 344631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344756:1
position: 344756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:344885-345137:1:exon

position:344885:1
position: 344885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345137:1
position: 345137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:345541-345597:1:exon

position:345541:1
position: 345541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345597:1
position: 345597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:345827-345916:1:exon

position:345827:1
position: 345827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345916:1
position: 345916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:351007-351080:1:exon

position:351007:1
position: 351007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351080:1
position: 351080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:351585-351719:1:exon

position:351585:1
position: 351585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351719:1
position: 351719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:352476-352696:1:exon

position:352476:1
position: 352476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352696:1
position: 352696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:357971-358162:1:exon

position:357971:1
position: 357971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358162:1
position: 358162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:358460-358557:1:exon

position:358460:1
position: 358460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358557:1
position: 358557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:358651-358766:1:exon

position:358651:1
position: 358651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358766:1
position: 358766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:361794-361901:1:exon

position:361794:1
position: 361794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361901:1
position: 361901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:363889-364003:1:exon

position:363889:1
position: 363889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364003:1
position: 364003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:364106-364213:1:exon

position:364106:1
position: 364106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364213:1
position: 364213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:367526-367764:1:exon

position:367526:1
position: 367526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367764:1
position: 367764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:368456-368535:1:exon

position:368456:1
position: 368456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368535:1
position: 368535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:371510-371647:1:exon

position:371510:1
position: 371510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371647:1
position: 371647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:371784-371917:1:exon

position:371784:1
position: 371784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371917:1
position: 371917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:372029-372228:1:exon

position:372029:1
position: 372029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372228:1
position: 372228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:374437-374547:1:exon

position:374437:1
position: 374437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374547:1
position: 374547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:376044-376217:1:exon

position:376044:1
position: 376044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376217:1
position: 376217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:376568-376683:1:exon

position:376568:1
position: 376568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376683:1
position: 376683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:376790-376929:1:exon

position:376790:1
position: 376790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376929:1
position: 376929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:377608-377685:1:exon

position:377608:1
position: 377608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377685:1
position: 377685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:379817-379891:1:exon

position:379817:1
position: 379817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379891:1
position: 379891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:379973-380033:1:exon

position:379973:1
position: 379973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380033:1
position: 380033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:395521-396464:1:exon

position:395521:1
position: 395521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NCAPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NCAPD3
product: non-SMC condensin II complex subunit D3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_031443352.1
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(329285..329409,331996..332150,335046..335208,339416..339600,340206..340373,340478..340539,340724..340811,342457..342590,343787..343859,344631..344756,344885..345137,345541..345597,345827..345916,351007..351080,351585..351719,352476..352696,357971..358162,358460..358557,358651..358766,361794..361901,363889..364003,364106..364213,367526..367764,368456..368535,371510..371647,371784..371917,372029..372228,374437..374547,376044..376217,376568..376683,376790..376929,377608..377685,379817..380033,380114..380641)
location: region:329285-380641:1
so has part: feature:329285-329409:1:exon
so has part: feature:331996-332150:1:exon
so has part: feature:335046-335208:1:exon
so has part: feature:339416-339600:1:exon
so has part: feature:340206-340373:1:exon
so has part: feature:340478-340539:1:exon
so has part: feature:340724-340811:1:exon
so has part: feature:342457-342590:1:exon
so has part: feature:343787-343859:1:exon
so has part: feature:344631-344756:1:exon
so has part: feature:344885-345137:1:exon
so has part: feature:345541-345597:1:exon
so has part: feature:345827-345916:1:exon
so has part: feature:351007-351080:1:exon
so has part: feature:351585-351719:1:exon
so has part: feature:352476-352696:1:exon
so has part: feature:357971-358162:1:exon
so has part: feature:358460-358557:1:exon
so has part: feature:358651-358766:1:exon
so has part: feature:361794-361901:1:exon
so has part: feature:363889-364003:1:exon
so has part: feature:364106-364213:1:exon
so has part: feature:367526-367764:1:exon
so has part: feature:368456-368535:1:exon
so has part: feature:371510-371647:1:exon
so has part: feature:371784-371917:1:exon
so has part: feature:372029-372228:1:exon
so has part: feature:374437-374547:1:exon
so has part: feature:376044-376217:1:exon
so has part: feature:376568-376683:1:exon
so has part: feature:376790-376929:1:exon
so has part: feature:377608-377685:1:exon
so has part: feature:379817-380033:1:exon
so has part: feature:380114-380641:1:exon

position:380641:1
position: 380641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329285-329409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331996-332150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335046-335208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339416-339600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340206-340373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:340478-340539:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340724-340811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342457-342590:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343787-343859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:344631-344756:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:344885-345137:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345541-345597:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345827-345916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:351007-351080:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351585-351719:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:352476-352696:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:357971-358162:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:358460-358557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:358651-358766:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:361794-361901:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:363889-364003:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:364106-364213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:367526-367764:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:368456-368535:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:371510-371647:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:371784-371917:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:372029-372228:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:374437-374547:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:376044-376217:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:376568-376683:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:376790-376929:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:377608-377685:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:379817-380033:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:380114-380641:1:exon

position:380114:1
position: 380114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NCAPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NCAPD3
product: non-SMC condensin II complex subunit D3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_031443354.1
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(329285..329409,331996..332150,335046..335208,339416..339600,340206..340373,340478..340539,340724..340811,342457..342590,343787..343859,344631..344756,344885..345137,345541..345597,345827..345916,351007..351080,351585..351719,352476..352696,357971..358162,358460..358557,358651..358766,361794..361901,363889..364003,364106..364213,367526..367764,368456..368535,371510..371647,371784..371917,372029..372228,374437..374547,376044..376217,376568..376683,376790..376929,377608..377685,379817..379891,379973..380033,380114..380641)
location: region:329285-380641:1
so has part: feature:329285-329409:1:exon
so has part: feature:331996-332150:1:exon
so has part: feature:335046-335208:1:exon
so has part: feature:339416-339600:1:exon
so has part: feature:340206-340373:1:exon
so has part: feature:340478-340539:1:exon
so has part: feature:340724-340811:1:exon
so has part: feature:342457-342590:1:exon
so has part: feature:343787-343859:1:exon
so has part: feature:344631-344756:1:exon
so has part: feature:344885-345137:1:exon
so has part: feature:345541-345597:1:exon
so has part: feature:345827-345916:1:exon
so has part: feature:351007-351080:1:exon
so has part: feature:351585-351719:1:exon
so has part: feature:352476-352696:1:exon
so has part: feature:357971-358162:1:exon
so has part: feature:358460-358557:1:exon
so has part: feature:358651-358766:1:exon
so has part: feature:361794-361901:1:exon
so has part: feature:363889-364003:1:exon
so has part: feature:364106-364213:1:exon
so has part: feature:367526-367764:1:exon
so has part: feature:368456-368535:1:exon
so has part: feature:371510-371647:1:exon
so has part: feature:371784-371917:1:exon
so has part: feature:372029-372228:1:exon
so has part: feature:374437-374547:1:exon
so has part: feature:376044-376217:1:exon
so has part: feature:376568-376683:1:exon
so has part: feature:376790-376929:1:exon
so has part: feature:377608-377685:1:exon
so has part: feature:379817-379891:1:exon
so has part: feature:379973-380033:1:exon
so has part: feature:380114-380641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329285-329409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331996-332150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335046-335208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339416-339600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340206-340373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:340478-340539:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340724-340811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342457-342590:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343787-343859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:344631-344756:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:344885-345137:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345541-345597:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345827-345916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:351007-351080:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351585-351719:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:352476-352696:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:357971-358162:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:358460-358557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:358651-358766:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:361794-361901:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:363889-364003:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:364106-364213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:367526-367764:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:368456-368535:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:371510-371647:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:371784-371917:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:372029-372228:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:374437-374547:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:376044-376217:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:376568-376683:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:376790-376929:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:377608-377685:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:379817-379891:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:379973-380033:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:380114-380641:1:exon

NCAPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NCAPD3
product: non-SMC condensin II complex subunit D3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_031443355.1
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(329285..329409,331996..332150,335046..335208,339416..339600,340206..340373,340478..340539,340724..340811,342457..342590,343787..343859,344631..344756,344885..345137,345541..345597,345827..345916,351007..351080,351585..351719,352476..352696,357971..358162,358460..358557,358651..358766,361794..361901,363889..364003,364106..364213,367526..367764,368456..368535,371510..371647,371784..371917,372029..372228,374437..374547,376044..376217,376790..376929,377608..377685,379817..379891)
location: region:329285-379891:1
so has part: feature:329285-329409:1:exon
so has part: feature:331996-332150:1:exon
so has part: feature:335046-335208:1:exon
so has part: feature:339416-339600:1:exon
so has part: feature:340206-340373:1:exon
so has part: feature:340478-340539:1:exon
so has part: feature:340724-340811:1:exon
so has part: feature:342457-342590:1:exon
so has part: feature:343787-343859:1:exon
so has part: feature:344631-344756:1:exon
so has part: feature:344885-345137:1:exon
so has part: feature:345541-345597:1:exon
so has part: feature:345827-345916:1:exon
so has part: feature:351007-351080:1:exon
so has part: feature:351585-351719:1:exon
so has part: feature:352476-352696:1:exon
so has part: feature:357971-358162:1:exon
so has part: feature:358460-358557:1:exon
so has part: feature:358651-358766:1:exon
so has part: feature:361794-361901:1:exon
so has part: feature:363889-364003:1:exon
so has part: feature:364106-364213:1:exon
so has part: feature:367526-367764:1:exon
so has part: feature:368456-368535:1:exon
so has part: feature:371510-371647:1:exon
so has part: feature:371784-371917:1:exon
so has part: feature:372029-372228:1:exon
so has part: feature:374437-374547:1:exon
so has part: feature:376044-376217:1:exon
so has part: feature:376790-376929:1:exon
so has part: feature:377608-377685:1:exon
so has part: feature:379817-379891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329285-329409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331996-332150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335046-335208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339416-339600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340206-340373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:340478-340539:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340724-340811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342457-342590:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343787-343859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:344631-344756:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:344885-345137:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345541-345597:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345827-345916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:351007-351080:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351585-351719:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:352476-352696:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:357971-358162:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:358460-358557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:358651-358766:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:361794-361901:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:363889-364003:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:364106-364213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:367526-367764:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:368456-368535:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:371510-371647:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:371784-371917:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:372029-372228:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:374437-374547:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:376044-376217:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:376790-376929:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:377608-377685:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:379817-379891:1:exon

NCAPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NCAPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: condensin-2 complex subunit D3 isoform X2
translation: MARPNLGSGLQPWSPLDLSREWVDAVWELEFTETEPLDPSIEAEIVENGLSAFTKLYDSLFPFAIEEHGSTESVWTFFIENNISHGALVALFHHFVQVVHKKSVSVQHREFGLHAAGLYFLLLEVPGSVANQVFHPVMFDKCIQILKRSWPQESSSSQKRKKEQPKNSQANPRGSRKRGKLPRKEDMEMDEIIEEQEDEESIYFSARDLCQIRNAIFHVLKNFLRLLPKFSLKEKPQCVQNCVEVFVALTNFEPVLHEFHVTQARNLDEAKYIPELAYRGLYLLCSPIHGEGDKVISCVFHQMLNIILMLEVGEGSHRTPLAITSPVISSRNQAVRFISSLVDELKESVFPVLHILLQHICAKVIDKSEYRTHAAQSLVQLLSKLPCGEYAAFIAWLYRYSRSSKIPHRVFTLDVALALLELPEREVDSTLRPEQHRFLKHKFLVQDIMFARCLDKAPTVRSKALSSFAHCLEFSVPSASESVLELLVNSSTISGIESHHDTLPKHSSAFSSQRQTLSPPGGSEVTHTDSSGGPAGSRESCVMAMLRKRAQDEKANVRRSALQVLVSILKHCDVSGMKEELSILQDRCRDPTVSVRKQALQSLTELLTAQPHCIQIQKAWLVGAVPVVMDCESTVQDKALECLDQLLLQNIRHHSQFHPGDDGQVLAWALLALLSTESREMSRYLNKAFHIWAKKDKFSSAFVNNVLSHAGTEHSAPAWMLLAKVAGSAPALDYTRIIKSWEKISSQQSPSADTLGHILCVIGHIAKHLPQSTRDKVTDVVKGKLNGFQWSLELISSAVDTLQSLCRASAETPLEEQELLAQVCGDVLSSCVCCLSNVVLKEDGAGRMDEDLVVKYIFTLGDIAQLCPASVDKRAFLLIQSILAASASADCLTPGPGSSEAPASQPLSQVQGSVMPSVIRAHAVITLGKLCLQHEDLAKKSVPALVRELEVCEDAAVRSNVVIVLCDLCIRYTVMVDKYIPNISMCLKDPDAFVRKQTLLLLTNLLQEDFVKWKGSLFFRFVSTLTDPHPDIASLGEFCLAHLLLKRSPTTFFQHFIECIFHFSSYEKHEKYNRFPQSEREKRLFSLKGKTNKEKRMKIYRFLLEHFTDEQRFNMTSKLCLGILACFADGTLPLDMEANELLSDTFEVLSSKEIKLLAMRSKPDKDLLLEEDDLALANAVMQEAQKKLISQVQKRNFIENIIPIIISLKTVLEKNKMPALRELMNYLREVMQDYRDEVKDFFALDKQLASELEYDMKRHREQLAQEQEQALARRPSMGAQGAQAVQVVPSLEIGPAGAGRDGASLDPGSPPPAPGPPERLMHRARPVSLSTIAVLNSVRRAVELSGQPRSRSAGLLPSSVRPRSPGEPSNQASSQGLEQESSGAIDRVTNRAISTPERTIQNVTFGAGLSYIGSPRTPCPAREKMDAQSHGDDILCLSLPDKPSQETSRPGPPVSGRRKEGTNTSPPEADRNQEMFDFPPCPFSMKQA
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(329349..329409,331996..332150,335046..335208,339416..339600,340206..340373,340478..340539,340724..340811,342457..342590,343787..343859,344631..344756,344885..345137,345541..345597,345827..345916,351007..351080,351585..351719,352476..352696,357971..358162,358460..358557,358651..358766,361794..361901,363889..364003,364106..364213,367526..367764,368456..368535,371510..371647,371784..371917,372029..372228,374437..374547,376044..376217,376568..376683,376790..376929,377608..377685,379817..379891,379973..380033,395521..395659)
location: region:329349-395659:1
so has part: feature:329349-329409:1:exon
so has part: feature:331996-332150:1:exon
so has part: feature:335046-335208:1:exon
so has part: feature:339416-339600:1:exon
so has part: feature:340206-340373:1:exon
so has part: feature:340478-340539:1:exon
so has part: feature:340724-340811:1:exon
so has part: feature:342457-342590:1:exon
so has part: feature:343787-343859:1:exon
so has part: feature:344631-344756:1:exon
so has part: feature:344885-345137:1:exon
so has part: feature:345541-345597:1:exon
so has part: feature:345827-345916:1:exon
so has part: feature:351007-351080:1:exon
so has part: feature:351585-351719:1:exon
so has part: feature:352476-352696:1:exon
so has part: feature:357971-358162:1:exon
so has part: feature:358460-358557:1:exon
so has part: feature:358651-358766:1:exon
so has part: feature:361794-361901:1:exon
so has part: feature:363889-364003:1:exon
so has part: feature:364106-364213:1:exon
so has part: feature:367526-367764:1:exon
so has part: feature:368456-368535:1:exon
so has part: feature:371510-371647:1:exon
so has part: feature:371784-371917:1:exon
so has part: feature:372029-372228:1:exon
so has part: feature:374437-374547:1:exon
so has part: feature:376044-376217:1:exon
so has part: feature:376568-376683:1:exon
so has part: feature:376790-376929:1:exon
so has part: feature:377608-377685:1:exon
so has part: feature:379817-379891:1:exon
so has part: feature:379973-380033:1:exon
so has part: feature:395521-395659:1:exon

XP_031299213.1
type: Protein
SIO_000068: ncbiprotein

position:329349:1
position: 329349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395659:1
position: 395659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329349-329409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331996-332150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335046-335208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339416-339600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340206-340373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:340478-340539:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340724-340811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342457-342590:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343787-343859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:344631-344756:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:344885-345137:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345541-345597:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345827-345916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:351007-351080:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351585-351719:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:352476-352696:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:357971-358162:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:358460-358557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:358651-358766:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:361794-361901:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:363889-364003:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:364106-364213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:367526-367764:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:368456-368535:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:371510-371647:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:371784-371917:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:372029-372228:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:374437-374547:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:376044-376217:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:376568-376683:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:376790-376929:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:377608-377685:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:379817-379891:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:379973-380033:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:395521-395659:1:exon

NCAPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NCAPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: condensin-2 complex subunit D3 isoform X1
translation: MARPNLGSGLQPWSPLDLSREWVDAVWELEFTETEPLDPSIEAEIVENGLSAFTKLYDSLFPFAIEEHGSTESVWTFFIENNISHGALVALFHHFVQVVHKKSVSVQHREFGLHAAGLYFLLLEVPGSVANQVFHPVMFDKCIQILKRSWPQESSSSQKRKKEQPKNSQANPRGSRKRGKLPRKEDMEMDEIIEEQEDEESIYFSARDLCQIRNAIFHVLKNFLRLLPKFSLKEKPQCVQNCVEVFVALTNFEPVLHEFHVTQARNLDEAKYIPELAYRGLYLLCSPIHGEGDKVISCVFHQMLNIILMLEVGEGSHRTPLAITSPVISSRNQAVRFISSLVDELKESVFPVLHILLQHICAKVIDKSEYRTHAAQSLVQLLSKLPCGEYAAFIAWLYRYSRSSKIPHRVFTLDVALALLELPEREVDSTLRPEQHRFLKHKFLVQDIMFARCLDKAPTVRSKALSSFAHCLEFSVPSASESVLELLVNSSTISGIESHHDTLPKHSSAFSSQRQTLSPPGGSEVTHTDSSGGPAGSRESCVMAMLRKRAQDEKANVRRSALQVLVSILKHCDVSGMKEELSILQDRCRDPTVSVRKQALQSLTELLTAQPHCIQIQKAWLVGAVPVVMDCESTVQDKALECLDQLLLQNIRHHSQFHPGDDGQVLAWALLALLSTESREMSRYLNKAFHIWAKKDKFSSAFVNNVLSHAGTEHSAPAWMLLAKVAGSAPALDYTRIIKSWEKISSQQSPSADTLGHILCVIGHIAKHLPQSTRDKVTDVVKGKLNGFQWSLELISSAVDTLQSLCRASAETPLEEQELLAQVCGDVLSSCVCCLSNVVLKEDGAGRMDEDLVVKYIFTLGDIAQLCPASVDKRAFLLIQSILAASASADCLTPGPGSSEAPASQPLSQVQGSVMPSVIRAHAVITLGKLCLQHEDLAKKSVPALVRELEVCEDAAVRSNVVIVLCDLCIRYTVMVDKYIPNISMCLKDPDAFVRKQTLLLLTNLLQEDFVKWKGSLFFRFVSTLTDPHPDIASLGEFCLAHLLLKRSPTTFFQHFIECIFHFSSYEKHEKYNRFPQSEREKRLFSLKGKTNKEKRMKIYRFLLEHFTDEQRFNMTSKLCLGILACFADGTLPLDMEANELLSDTFEVLSSKEIKLLAMRSKPDKDLLLEEDDLALANAVMQEAQKKLISQVQKRNFIENIIPIIISLKTVLEKNKMPALRELMNYLREVMQDYRDEVKDFFALDKQLASELEYDMKRHREQLAQEQEQALARRPSMGAQGAQAVQVVPSLEIGPAGAGRDGASLDPGSPPPAPGPPERLMHRARPVSLSTIAVLNSVRRAVELSGQPRSRSAGLLPSSVRPRSPGEPSNQASSQGLEQESSGAIDRVTNRAISTPERTIQNVTFGAGLSYIGSPRTPCPARGKSPPVRHTSCSPIVLPGSLSLSDSLSEKMDAQSHGDDILCLSLPDKPPPQPPQWNVTSPARGRDSTAPSRRSLRKTPLQTAN
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(329349..329409,331996..332150,335046..335208,339416..339600,340206..340373,340478..340539,340724..340811,342457..342590,343787..343859,344631..344756,344885..345137,345541..345597,345827..345916,351007..351080,351585..351719,352476..352696,357971..358162,358460..358557,358651..358766,361794..361901,363889..364003,364106..364213,367526..367764,368456..368535,371510..371647,371784..371917,372029..372228,374437..374547,376044..376217,376568..376683,376790..376929,377608..377685,379817..380033,380114..380222)
location: region:329349-380222:1
so has part: feature:329349-329409:1:exon
so has part: feature:331996-332150:1:exon
so has part: feature:335046-335208:1:exon
so has part: feature:339416-339600:1:exon
so has part: feature:340206-340373:1:exon
so has part: feature:340478-340539:1:exon
so has part: feature:340724-340811:1:exon
so has part: feature:342457-342590:1:exon
so has part: feature:343787-343859:1:exon
so has part: feature:344631-344756:1:exon
so has part: feature:344885-345137:1:exon
so has part: feature:345541-345597:1:exon
so has part: feature:345827-345916:1:exon
so has part: feature:351007-351080:1:exon
so has part: feature:351585-351719:1:exon
so has part: feature:352476-352696:1:exon
so has part: feature:357971-358162:1:exon
so has part: feature:358460-358557:1:exon
so has part: feature:358651-358766:1:exon
so has part: feature:361794-361901:1:exon
so has part: feature:363889-364003:1:exon
so has part: feature:364106-364213:1:exon
so has part: feature:367526-367764:1:exon
so has part: feature:368456-368535:1:exon
so has part: feature:371510-371647:1:exon
so has part: feature:371784-371917:1:exon
so has part: feature:372029-372228:1:exon
so has part: feature:374437-374547:1:exon
so has part: feature:376044-376217:1:exon
so has part: feature:376568-376683:1:exon
so has part: feature:376790-376929:1:exon
so has part: feature:377608-377685:1:exon
so has part: feature:379817-380033:1:exon
so has part: feature:380114-380222:1:exon

XP_031299212.1
type: Protein
SIO_000068: ncbiprotein

position:380222:1
position: 380222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329349-329409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331996-332150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335046-335208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339416-339600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340206-340373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:340478-340539:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340724-340811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342457-342590:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343787-343859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:344631-344756:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:344885-345137:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345541-345597:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345827-345916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:351007-351080:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351585-351719:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:352476-352696:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:357971-358162:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:358460-358557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:358651-358766:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:361794-361901:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:363889-364003:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:364106-364213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:367526-367764:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:368456-368535:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:371510-371647:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:371784-371917:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:372029-372228:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:374437-374547:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:376044-376217:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:376568-376683:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:376790-376929:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:377608-377685:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:379817-380033:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:380114-380222:1:exon

NCAPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NCAPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: condensin-2 complex subunit D3 isoform X3
translation: MARPNLGSGLQPWSPLDLSREWVDAVWELEFTETEPLDPSIEAEIVENGLSAFTKLYDSLFPFAIEEHGSTESVWTFFIENNISHGALVALFHHFVQVVHKKSVSVQHREFGLHAAGLYFLLLEVPGSVANQVFHPVMFDKCIQILKRSWPQESSSSQKRKKEQPKNSQANPRGSRKRGKLPRKEDMEMDEIIEEQEDEESIYFSARDLCQIRNAIFHVLKNFLRLLPKFSLKEKPQCVQNCVEVFVALTNFEPVLHEFHVTQARNLDEAKYIPELAYRGLYLLCSPIHGEGDKVISCVFHQMLNIILMLEVGEGSHRTPLAITSPVISSRNQAVRFISSLVDELKESVFPVLHILLQHICAKVIDKSEYRTHAAQSLVQLLSKLPCGEYAAFIAWLYRYSRSSKIPHRVFTLDVALALLELPEREVDSTLRPEQHRFLKHKFLVQDIMFARCLDKAPTVRSKALSSFAHCLEFSVPSASESVLELLVNSSTISGIESHHDTLPKHSSAFSSQRQTLSPPGGSEVTHTDSSGGPAGSRESCVMAMLRKRAQDEKANVRRSALQVLVSILKHCDVSGMKEELSILQDRCRDPTVSVRKQALQSLTELLTAQPHCIQIQKAWLVGAVPVVMDCESTVQDKALECLDQLLLQNIRHHSQFHPGDDGQVLAWALLALLSTESREMSRYLNKAFHIWAKKDKFSSAFVNNVLSHAGTEHSAPAWMLLAKVAGSAPALDYTRIIKSWEKISSQQSPSADTLGHILCVIGHIAKHLPQSTRDKVTDVVKGKLNGFQWSLELISSAVDTLQSLCRASAETPLEEQELLAQVCGDVLSSCVCCLSNVVLKEDGAGRMDEDLVVKYIFTLGDIAQLCPASVDKRAFLLIQSILAASASADCLTPGPGSSEAPASQPLSQVQGSVMPSVIRAHAVITLGKLCLQHEDLAKKSVPALVRELEVCEDAAVRSNVVIVLCDLCIRYTVMVDKYIPNISMCLKDPDAFVRKQTLLLLTNLLQEDFVKWKGSLFFRFVSTLTDPHPDIASLGEFCLAHLLLKRSPTTFFQHFIECIFHFSSYEKHEKYNRFPQSEREKRLFSLKGKTNKEKRMKIYRFLLEHFTDEQRFNMTSKLCLGILACFADGTLPLDMEANELLSDTFEVLSSKEIKLLAMRSKPDKDLLLEEDDLALANAVMQEAQKKLISQVQKRNFIENIIPIIISLKTVLEKNKMPALRELMNYLREVMQDYRDEVKDFFALDKQLASELEYDMKRHREQLAQEQEQALARRPSMGAQGAQAVQVVPSLEIGPAGAGRDGASLDPGSPPPAPGPPERLMHRARPVSLSTIAVLNSVRRAVELSGQPRSRSAGLLPSSVRPRSPGEPSNQASSQGLEQESSGAIDRVTNRAISTPERTIQNVTFGAGLSYIGSPRTPCPAREKMDAQSHGDDILCLSLPDKPPPQPPQWNVTSPARGRDSTAPSRRSLRKTPLQTAN
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(329349..329409,331996..332150,335046..335208,339416..339600,340206..340373,340478..340539,340724..340811,342457..342590,343787..343859,344631..344756,344885..345137,345541..345597,345827..345916,351007..351080,351585..351719,352476..352696,357971..358162,358460..358557,358651..358766,361794..361901,363889..364003,364106..364213,367526..367764,368456..368535,371510..371647,371784..371917,372029..372228,374437..374547,376044..376217,376568..376683,376790..376929,377608..377685,379817..379891,379973..380033,380114..380222)
location: region:329349-380222:1
so has part: feature:329349-329409:1:exon
so has part: feature:331996-332150:1:exon
so has part: feature:335046-335208:1:exon
so has part: feature:339416-339600:1:exon
so has part: feature:340206-340373:1:exon
so has part: feature:340478-340539:1:exon
so has part: feature:340724-340811:1:exon
so has part: feature:342457-342590:1:exon
so has part: feature:343787-343859:1:exon
so has part: feature:344631-344756:1:exon
so has part: feature:344885-345137:1:exon
so has part: feature:345541-345597:1:exon
so has part: feature:345827-345916:1:exon
so has part: feature:351007-351080:1:exon
so has part: feature:351585-351719:1:exon
so has part: feature:352476-352696:1:exon
so has part: feature:357971-358162:1:exon
so has part: feature:358460-358557:1:exon
so has part: feature:358651-358766:1:exon
so has part: feature:361794-361901:1:exon
so has part: feature:363889-364003:1:exon
so has part: feature:364106-364213:1:exon
so has part: feature:367526-367764:1:exon
so has part: feature:368456-368535:1:exon
so has part: feature:371510-371647:1:exon
so has part: feature:371784-371917:1:exon
so has part: feature:372029-372228:1:exon
so has part: feature:374437-374547:1:exon
so has part: feature:376044-376217:1:exon
so has part: feature:376568-376683:1:exon
so has part: feature:376790-376929:1:exon
so has part: feature:377608-377685:1:exon
so has part: feature:379817-379891:1:exon
so has part: feature:379973-380033:1:exon
so has part: feature:380114-380222:1:exon

XP_031299214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329349-329409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331996-332150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335046-335208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339416-339600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340206-340373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:340478-340539:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340724-340811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342457-342590:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343787-343859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:344631-344756:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:344885-345137:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345541-345597:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345827-345916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:351007-351080:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351585-351719:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:352476-352696:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:357971-358162:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:358460-358557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:358651-358766:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:361794-361901:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:363889-364003:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:364106-364213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:367526-367764:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:368456-368535:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:371510-371647:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:371784-371917:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:372029-372228:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:374437-374547:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:376044-376217:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:376568-376683:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:376790-376929:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:377608-377685:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:379817-379891:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:379973-380033:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:380114-380222:1:exon

NCAPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NCAPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: condensin-2 complex subunit D3 isoform X4
translation: MARPNLGSGLQPWSPLDLSREWVDAVWELEFTETEPLDPSIEAEIVENGLSAFTKLYDSLFPFAIEEHGSTESVWTFFIENNISHGALVALFHHFVQVVHKKSVSVQHREFGLHAAGLYFLLLEVPGSVANQVFHPVMFDKCIQILKRSWPQESSSSQKRKKEQPKNSQANPRGSRKRGKLPRKEDMEMDEIIEEQEDEESIYFSARDLCQIRNAIFHVLKNFLRLLPKFSLKEKPQCVQNCVEVFVALTNFEPVLHEFHVTQARNLDEAKYIPELAYRGLYLLCSPIHGEGDKVISCVFHQMLNIILMLEVGEGSHRTPLAITSPVISSRNQAVRFISSLVDELKESVFPVLHILLQHICAKVIDKSEYRTHAAQSLVQLLSKLPCGEYAAFIAWLYRYSRSSKIPHRVFTLDVALALLELPEREVDSTLRPEQHRFLKHKFLVQDIMFARCLDKAPTVRSKALSSFAHCLEFSVPSASESVLELLVNSSTISGIESHHDTLPKHSSAFSSQRQTLSPPGGSEVTHTDSSGGPAGSRESCVMAMLRKRAQDEKANVRRSALQVLVSILKHCDVSGMKEELSILQDRCRDPTVSVRKQALQSLTELLTAQPHCIQIQKAWLVGAVPVVMDCESTVQDKALECLDQLLLQNIRHHSQFHPGDDGQVLAWALLALLSTESREMSRYLNKAFHIWAKKDKFSSAFVNNVLSHAGTEHSAPAWMLLAKVAGSAPALDYTRIIKSWEKISSQQSPSADTLGHILCVIGHIAKHLPQSTRDKVTDVVKGKLNGFQWSLELISSAVDTLQSLCRASAETPLEEQELLAQVCGDVLSSCVCCLSNVVLKEDGAGRMDEDLVVKYIFTLGDIAQLCPASVDKRAFLLIQSILAASASADCLTPGPGSSEAPASQPLSQVQGSVMPSVIRAHAVITLGKLCLQHEDLAKKSVPALVRELEVCEDAAVRSNVVIVLCDLCIRYTVMVDKYIPNISMCLKDPDAFVRKQTLLLLTNLLQEDFVKWKGSLFFRFVSTLTDPHPDIASLGEFCLAHLLLKRSPTTFFQHFIECIFHFSSYEKHEKYNRFPQSEREKRLFSLKGKTNKEKRMKIYRFLLEHFTDEQRFNMTSKLCLGILACFADGTLPLDMEANELLSDTFEVLSSKEIKLLAMRSKPDKDLLLEEDDLALANAVMQEAQKKLISQVQKRNFIENIIPIIISLKTVLEKNKMPALRELMNYLREVMQDYRDEVKDFFALDKQLASELEYDMKRHREQLAQEQEQALARRPSMGAQGAQAVQACVTEHHRRPQFRQEGRGVEWPASQPECRAAALLRASQEPRRAQQPSVLPGPGARVQWSH
SIO_010081: NCAPD3
subclass of: SO_0000673
so part of: NCAPD3
location: join(329349..329409,331996..332150,335046..335208,339416..339600,340206..340373,340478..340539,340724..340811,342457..342590,343787..343859,344631..344756,344885..345137,345541..345597,345827..345916,351007..351080,351585..351719,352476..352696,357971..358162,358460..358557,358651..358766,361794..361901,363889..364003,364106..364213,367526..367764,368456..368535,371510..371647,371784..371917,372029..372228,374437..374547,376044..376217,376790..376929,377608..377650)
location: region:329349-377650:1
so has part: feature:329349-329409:1:exon
so has part: feature:331996-332150:1:exon
so has part: feature:335046-335208:1:exon
so has part: feature:339416-339600:1:exon
so has part: feature:340206-340373:1:exon
so has part: feature:340478-340539:1:exon
so has part: feature:340724-340811:1:exon
so has part: feature:342457-342590:1:exon
so has part: feature:343787-343859:1:exon
so has part: feature:344631-344756:1:exon
so has part: feature:344885-345137:1:exon
so has part: feature:345541-345597:1:exon
so has part: feature:345827-345916:1:exon
so has part: feature:351007-351080:1:exon
so has part: feature:351585-351719:1:exon
so has part: feature:352476-352696:1:exon
so has part: feature:357971-358162:1:exon
so has part: feature:358460-358557:1:exon
so has part: feature:358651-358766:1:exon
so has part: feature:361794-361901:1:exon
so has part: feature:363889-364003:1:exon
so has part: feature:364106-364213:1:exon
so has part: feature:367526-367764:1:exon
so has part: feature:368456-368535:1:exon
so has part: feature:371510-371647:1:exon
so has part: feature:371784-371917:1:exon
so has part: feature:372029-372228:1:exon
so has part: feature:374437-374547:1:exon
so has part: feature:376044-376217:1:exon
so has part: feature:376790-376929:1:exon
so has part: feature:377608-377650:1:exon

XP_031299215.1
type: Protein
SIO_000068: ncbiprotein

position:377650:1
position: 377650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329349-329409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331996-332150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335046-335208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339416-339600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340206-340373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:340478-340539:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340724-340811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342457-342590:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343787-343859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:344631-344756:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:344885-345137:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345541-345597:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345827-345916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:351007-351080:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351585-351719:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:352476-352696:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:357971-358162:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:358460-358557:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:358651-358766:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:361794-361901:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:363889-364003:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:364106-364213:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:367526-367764:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:368456-368535:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:371510-371647:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:371784-371917:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:372029-372228:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:374437-374547:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:376044-376217:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:376790-376929:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:377608-377650:1:exon

JAM3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: JAM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(381216..420321)
location: region:381216-420321:-1
so has part: feature:381216-420321:-1:exon
subclass of: SO_0000010

105104224
type: Gene
SIO_000068: ncbigene

position:381216:-1
position: 381216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420321:-1
position: 420321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381216-420321:-1:exon

JAM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: JAM3
product: junctional adhesion molecule 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_031443356.1
SIO_010081: JAM3
subclass of: SO_0000673
so part of: JAM3
location: complement(join(381216..383348,383655..383709,383793..383919,384995..385094,385557..385759,386051..386203,388944..389057,389490..389555,420177..420321))
location: region:381216-420321:-1
so has part: feature:420177-420321:-1:exon
so has part: feature:389490-389555:-1:exon
so has part: feature:388944-389057:-1:exon
so has part: feature:386051-386203:-1:exon
so has part: feature:385557-385759:-1:exon
so has part: feature:384995-385094:-1:exon
so has part: feature:383793-383919:-1:exon
so has part: feature:383655-383709:-1:exon
so has part: feature:381216-383348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420177-420321:-1:exon

position:420177:-1
position: 420177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:389490-389555:-1:exon

position:389490:-1
position: 389490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389555:-1
position: 389555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:388944-389057:-1:exon

position:388944:-1
position: 388944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389057:-1
position: 389057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:386051-386203:-1:exon

position:386051:-1
position: 386051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386203:-1
position: 386203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:385557-385759:-1:exon

position:385557:-1
position: 385557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385759:-1
position: 385759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:384995-385094:-1:exon

position:384995:-1
position: 384995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385094:-1
position: 385094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:383793-383919:-1:exon

position:383793:-1
position: 383793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383919:-1
position: 383919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:383655-383709:-1:exon

position:383655:-1
position: 383655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383709:-1
position: 383709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:381216-383348:-1:exon

position:383348:-1
position: 383348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

JAM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: JAM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: junctional adhesion molecule C
translation: MATGAGTGSRAGRMRGERARGPSAALDMALRRRPALALLLLLRGCLLGAVNLKSSNRNPVVQEFESVELSCIITDSQTSDPRIEWKKIQDAQTTYVYFDNKIQGDLAGRAELLGKTSLKIWNVTRTDSALYRCEVVARDDHKEIDEIVIELTVQVKPVSPVCRVPRAVPAGKAATLTCQEGEGSPRPRYSWYRDDVPLPTDSRANPRFRNSSFLFDAETGTLVFSAVHKEDSGRYYCIASNDAGSARCEEQEMEVYDLNIGGIIGGVLVVLAVLALITAGICCAYRRGYFINKQDGDSYKNPGRPDGVNYIRTDEEGDFRHKSSFVI
SIO_010081: JAM3
subclass of: SO_0000673
so part of: JAM3
location: complement(join(383313..383348,383655..383709,383793..383919,384995..385094,385557..385759,386051..386203,388944..389057,389490..389555,420177..420306))
location: region:383313-420306:-1
so has part: feature:420177-420306:-1:exon
so has part: feature:389490-389555:-1:exon
so has part: feature:388944-389057:-1:exon
so has part: feature:386051-386203:-1:exon
so has part: feature:385557-385759:-1:exon
so has part: feature:384995-385094:-1:exon
so has part: feature:383793-383919:-1:exon
so has part: feature:383655-383709:-1:exon
so has part: feature:383313-383348:-1:exon

XP_031299216.1
type: Protein
SIO_000068: ncbiprotein

position:383313:-1
position: 383313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420306:-1
position: 420306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420177-420306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389490-389555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388944-389057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:386051-386203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:385557-385759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:384995-385094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:383793-383919:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:383655-383709:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:383313-383348:-1:exon

LOC116150143
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150143
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(434540..436687)
location: region:434540-436687:-1
so has part: feature:434540-436687:-1:exon
subclass of: SO_0000011

116150143
type: Gene
SIO_000068: ncbigene

position:434540:-1
position: 434540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436687:-1
position: 436687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434540-436687:-1:exon

LOC116150143
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150143
product: uncharacterized LOC116150143
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004133781.1
SIO_010081: LOC116150143
subclass of: SO_0000673
so part of: LOC116150143
location: complement(join(434540..434727,434914..435019,435274..435432,436561..436687))
location: region:434540-436687:-1
so has part: feature:436561-436687:-1:exon
so has part: feature:435274-435432:-1:exon
so has part: feature:434914-435019:-1:exon
so has part: feature:434540-434727:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:436561-436687:-1:exon

position:436561:-1
position: 436561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:435274-435432:-1:exon

position:435274:-1
position: 435274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435432:-1
position: 435432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:434914-435019:-1:exon

position:434914:-1
position: 434914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435019:-1
position: 435019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:434540-434727:-1:exon

position:434727:-1
position: 434727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IGSF9B
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: IGSF9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 501698..554677
location: region:501698-554677:1
so has part: feature:501698-554677:1:exon
subclass of: SO_0000010

105104232
type: Gene
SIO_000068: ncbigene

position:501698:1
position: 501698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554677:1
position: 554677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501698-554677:1:exon

IGSF9B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: IGSF9B
product: immunoglobulin superfamily member 9B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004133794.1
SIO_010081: IGSF9B
so part of: IGSF9B
location: join(501698..502799,511827..512024,513433..513579,518329..518480,518638..518755,519730..519871,520099..520244,522356..522498,522742..522882,522963..523079,523347..523497,524264..524387,526428..526603,527560..527786,528597..528681,530508..530669,531072..531117,531666..533315,533953..534042,534717..534762,540347..540468,543145..543159)
location: region:501698-543159:1
so has part: feature:501698-502799:1:exon
so has part: feature:511827-512024:1:exon
so has part: feature:513433-513579:1:exon
so has part: feature:518329-518480:1:exon
so has part: feature:518638-518755:1:exon
so has part: feature:519730-519871:1:exon
so has part: feature:520099-520244:1:exon
so has part: feature:522356-522498:1:exon
so has part: feature:522742-522882:1:exon
so has part: feature:522963-523079:1:exon
so has part: feature:523347-523497:1:exon
so has part: feature:524264-524387:1:exon
so has part: feature:526428-526603:1:exon
so has part: feature:527560-527786:1:exon
so has part: feature:528597-528681:1:exon
so has part: feature:530508-530669:1:exon
so has part: feature:531072-531117:1:exon
so has part: feature:531666-533315:1:exon
so has part: feature:533953-534042:1:exon
so has part: feature:534717-534762:1:exon
so has part: feature:540347-540468:1:exon
so has part: feature:543145-543159:1:exon

position:543159:1
position: 543159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501698-502799:1:exon

position:502799:1
position: 502799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:511827-512024:1:exon

position:511827:1
position: 511827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512024:1
position: 512024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:513433-513579:1:exon

position:513433:1
position: 513433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513579:1
position: 513579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:518329-518480:1:exon

position:518329:1
position: 518329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518480:1
position: 518480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:518638-518755:1:exon

position:518638:1
position: 518638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518755:1
position: 518755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:519730-519871:1:exon

position:519730:1
position: 519730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519871:1
position: 519871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:520099-520244:1:exon

position:520099:1
position: 520099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520244:1
position: 520244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:522356-522498:1:exon

position:522356:1
position: 522356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522498:1
position: 522498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:522742-522882:1:exon

position:522742:1
position: 522742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522882:1
position: 522882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:522963-523079:1:exon

position:522963:1
position: 522963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523079:1
position: 523079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:523347-523497:1:exon

position:523347:1
position: 523347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523497:1
position: 523497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:524264-524387:1:exon

position:524264:1
position: 524264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524387:1
position: 524387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:526428-526603:1:exon

position:526428:1
position: 526428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526603:1
position: 526603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:527560-527786:1:exon

position:527560:1
position: 527560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527786:1
position: 527786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:528597-528681:1:exon

position:528597:1
position: 528597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528681:1
position: 528681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:530508-530669:1:exon

position:530508:1
position: 530508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530669:1
position: 530669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:531072-531117:1:exon

position:531072:1
position: 531072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531117:1
position: 531117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:531666-533315:1:exon

position:531666:1
position: 531666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533315:1
position: 533315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:533953-534042:1:exon

position:533953:1
position: 533953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534042:1
position: 534042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:534717-534762:1:exon

position:534717:1
position: 534717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534762:1
position: 534762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:540347-540468:1:exon

position:540347:1
position: 540347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540468:1
position: 540468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:543145-543159:1:exon

position:543145:1
position: 543145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IGSF9B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: IGSF9B
product: immunoglobulin superfamily member 9B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004133795.1
SIO_010081: IGSF9B
so part of: IGSF9B
location: join(501699..502799,511827..512024,513433..513579,518329..518480,518638..518755,519730..519871,520099..520244,522356..522498,522742..522882,522963..523079,523347..523497,524264..524387,526428..526603,527560..527786,528597..528681,530508..530669,531072..531117,531666..533315,534717..534762,540347..540468,543145..543159)
location: region:501699-543159:1
so has part: feature:501699-502799:1:exon
so has part: feature:511827-512024:1:exon
so has part: feature:513433-513579:1:exon
so has part: feature:518329-518480:1:exon
so has part: feature:518638-518755:1:exon
so has part: feature:519730-519871:1:exon
so has part: feature:520099-520244:1:exon
so has part: feature:522356-522498:1:exon
so has part: feature:522742-522882:1:exon
so has part: feature:522963-523079:1:exon
so has part: feature:523347-523497:1:exon
so has part: feature:524264-524387:1:exon
so has part: feature:526428-526603:1:exon
so has part: feature:527560-527786:1:exon
so has part: feature:528597-528681:1:exon
so has part: feature:530508-530669:1:exon
so has part: feature:531072-531117:1:exon
so has part: feature:531666-533315:1:exon
so has part: feature:534717-534762:1:exon
so has part: feature:540347-540468:1:exon
so has part: feature:543145-543159:1:exon

position:501699:1
position: 501699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501699-502799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511827-512024:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513433-513579:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518329-518480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518638-518755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519730-519871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:520099-520244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522356-522498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:522742-522882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522963-523079:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:523347-523497:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524264-524387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:526428-526603:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527560-527786:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:528597-528681:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:530508-530669:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:531072-531117:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:531666-533315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:534717-534762:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:540347-540468:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:543145-543159:1:exon

IGSF9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IGSF9B
product: immunoglobulin superfamily member 9B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031443357.1
SIO_010081: IGSF9B
subclass of: SO_0000673
so part of: IGSF9B
location: join(501700..502799,511827..512024,513433..513579,518329..518480,518638..518755,519730..519871,520099..520244,522356..522498,522742..522882,522963..523079,523347..523497,524264..524387,526428..526603,527560..527786,528597..528681,530508..530669,531072..531117,531666..533315,540347..540468,543145..554677)
location: region:501700-554677:1
so has part: feature:501700-502799:1:exon
so has part: feature:511827-512024:1:exon
so has part: feature:513433-513579:1:exon
so has part: feature:518329-518480:1:exon
so has part: feature:518638-518755:1:exon
so has part: feature:519730-519871:1:exon
so has part: feature:520099-520244:1:exon
so has part: feature:522356-522498:1:exon
so has part: feature:522742-522882:1:exon
so has part: feature:522963-523079:1:exon
so has part: feature:523347-523497:1:exon
so has part: feature:524264-524387:1:exon
so has part: feature:526428-526603:1:exon
so has part: feature:527560-527786:1:exon
so has part: feature:528597-528681:1:exon
so has part: feature:530508-530669:1:exon
so has part: feature:531072-531117:1:exon
so has part: feature:531666-533315:1:exon
so has part: feature:540347-540468:1:exon
so has part: feature:543145-554677:1:exon

position:501700:1
position: 501700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501700-502799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511827-512024:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513433-513579:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518329-518480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518638-518755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519730-519871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:520099-520244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522356-522498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:522742-522882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522963-523079:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:523347-523497:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524264-524387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:526428-526603:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527560-527786:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:528597-528681:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:530508-530669:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:531072-531117:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:531666-533315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:540347-540468:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543145-554677:1:exon

IGSF9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IGSF9B
product: immunoglobulin superfamily member 9B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031443358.1
SIO_010081: IGSF9B
subclass of: SO_0000673
so part of: IGSF9B
location: join(501701..502799,511827..512024,513433..513579,518329..518480,518638..518755,519730..519871,520099..520244,522356..522498,522742..522882,522963..523079,523347..523497,524264..524375,526428..526603,527560..527786,528597..528681,530508..530669,531072..531117,531666..533315,540347..540468,543145..554677)
location: region:501701-554677:1
so has part: feature:501701-502799:1:exon
so has part: feature:511827-512024:1:exon
so has part: feature:513433-513579:1:exon
so has part: feature:518329-518480:1:exon
so has part: feature:518638-518755:1:exon
so has part: feature:519730-519871:1:exon
so has part: feature:520099-520244:1:exon
so has part: feature:522356-522498:1:exon
so has part: feature:522742-522882:1:exon
so has part: feature:522963-523079:1:exon
so has part: feature:523347-523497:1:exon
so has part: feature:524264-524375:1:exon
so has part: feature:526428-526603:1:exon
so has part: feature:527560-527786:1:exon
so has part: feature:528597-528681:1:exon
so has part: feature:530508-530669:1:exon
so has part: feature:531072-531117:1:exon
so has part: feature:531666-533315:1:exon
so has part: feature:540347-540468:1:exon
so has part: feature:543145-554677:1:exon

position:501701:1
position: 501701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501701-502799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511827-512024:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513433-513579:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518329-518480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518638-518755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519730-519871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:520099-520244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522356-522498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:522742-522882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522963-523079:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:523347-523497:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524264-524375:1:exon

position:524375:1
position: 524375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:526428-526603:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527560-527786:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:528597-528681:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:530508-530669:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:531072-531117:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:531666-533315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:540347-540468:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543145-554677:1:exon

IGSF9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IGSF9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein turtle homolog B isoform X1
translation: MIWYVATLIASVISARGLAAQGAHGLREEPEFVTARAGESVVLRCDVVHPVTGQPPPYVVEWFKFGVPIPIFIKFGYYPPHVDPEYAGRASLHDKASLRLEQVRAEDQGWYECKVLLLDQQYDTFHNGSWVHLTINAPPTFTETPPQYIEAKEGSSVTMTCTAFGNPKPIVTWLKEGTLLGANGKYQVSDGSLTVTSVSREDRGAYTCRAYSIQGEAMHTTHLLVQGPPFIVSPPENITVNISQDALLTCRAEAYPGNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRVKPEDAGKYTCVPSNSLGRSPSASAYLTVQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATVVKWNKDGRPLQVEKNLGWTLLEDGSIRIEEATEEALGTYTCVPYNTLGTMGQSAPARLVLKDPPYFTVLPGWEYRQEAGRELLIPCAAAGDPFPVITWRKVGKPSRSKHNVLPSGSLQFRALSKEDHGEWECVATNVVTSITASTHLTVTGTSPHAPGSVRVQVSMTAANVSWEPGYDGGFEQTFSVWYGPLMKRAQFGPHDWLSLPVPLGPSWLLVDALEPETAYQFSVLAQNKLGASAFSEVVTVNTLAFPVTTPEPLVLVTPPRCLTANRTQQGVLLSWLPPANHSFPIDRYIMEFRVGERWETLEDAIPGTDGDFFARDLSQDTWYEFRVLAVMQDLVSEPSNIAGVSSTDIFPQPDLTEDGLARPVLAGIVATICFLAAAILFSTLAACFVNKQRKRKLKRKKDPPLSITHCRKSLESPLSSGKVSPESTRTLRAPSESSDDQGQPAAKRMLSPAREKELSLYKKTKRAIGSRKYSVAKAEAEAEATTPIELISRGPDGRFVMDPSEMEPSAKTRRIEGFPFAEETDMYPEFRQSDEENEDPLVPASVAALKSQLTPLSSSQESYLPPPAYSPRFQPRGLEGPGGLEGRLQATGQARPPAPRPFHHGQYYGYLSSSSPGEVEPPPFYMPEVGSPLSSVMSSPPLHAEGPFGHPTIPEENGENASNSTLPLTQTPTGGRSPEPWGRPEFPFGGLETPAMMFPHQLHPCDVPEGLQPAAGLPRGLPPAPLQVPAAYPGILSLEAPKGWAGKSPGRGPAPVPPAAKWQDRPVQPLVSQGQLRHTSQGMGIPVLPYPEPAEPGAHGGPSTLGLDTRWYEPQPRPRPSPRQARRAEPSLHQVVLQPSRLSPLTQSPLSSRTGSPELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSTGSPSQSSRSGSPSYRPTMGFTTLATGYPSPPPGPAGPTDNLDVFGQTPSSRRMGEELLRPEPPPPPLTTSGTQTPAPGNAAVPERLEALKYQRIKKPKKSSKGSSKSKRRSDGSASQAQRLPDPQVLWPDEAVCLRRKKRHSRPDPFARLSDLCHRQLPEDQTAILSSVEHDDPGHATLL
SIO_010081: IGSF9B
subclass of: SO_0000673
so part of: IGSF9B
location: join(502736..502799,511827..512024,513433..513579,518329..518480,518638..518755,519730..519871,520099..520244,522356..522498,522742..522882,522963..523079,523347..523497,524264..524387,526428..526603,527560..527786,528597..528681,530508..530669,531072..531117,531666..533315,540347..540468,543145..543353)
location: region:502736-543353:1
so has part: feature:502736-502799:1:exon
so has part: feature:511827-512024:1:exon
so has part: feature:513433-513579:1:exon
so has part: feature:518329-518480:1:exon
so has part: feature:518638-518755:1:exon
so has part: feature:519730-519871:1:exon
so has part: feature:520099-520244:1:exon
so has part: feature:522356-522498:1:exon
so has part: feature:522742-522882:1:exon
so has part: feature:522963-523079:1:exon
so has part: feature:523347-523497:1:exon
so has part: feature:524264-524387:1:exon
so has part: feature:526428-526603:1:exon
so has part: feature:527560-527786:1:exon
so has part: feature:528597-528681:1:exon
so has part: feature:530508-530669:1:exon
so has part: feature:531072-531117:1:exon
so has part: feature:531666-533315:1:exon
so has part: feature:540347-540468:1:exon
so has part: feature:543145-543353:1:exon

XP_031299217.1
type: Protein
SIO_000068: ncbiprotein

position:502736:1
position: 502736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543353:1
position: 543353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502736-502799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511827-512024:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513433-513579:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518329-518480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518638-518755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519730-519871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:520099-520244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522356-522498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:522742-522882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522963-523079:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:523347-523497:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524264-524387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:526428-526603:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527560-527786:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:528597-528681:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:530508-530669:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:531072-531117:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:531666-533315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:540347-540468:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543145-543353:1:exon

IGSF9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IGSF9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein turtle homolog B isoform X2
translation: MIWYVATLIASVISARGLAAQGAHGLREEPEFVTARAGESVVLRCDVVHPVTGQPPPYVVEWFKFGVPIPIFIKFGYYPPHVDPEYAGRASLHDKASLRLEQVRAEDQGWYECKVLLLDQQYDTFHNGSWVHLTINAPPTFTETPPQYIEAKEGSSVTMTCTAFGNPKPIVTWLKEGTLLGANGKYQVSDGSLTVTSVSREDRGAYTCRAYSIQGEAMHTTHLLVQGPPFIVSPPENITVNISQDALLTCRAEAYPGNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRVKPEDAGKYTCVPSNSLGRSPSASAYLTVQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATVVKWNKDGRPLQVEKNLGWTLLEDGSIRIEEATEEALGTYTCVPYNTLGTMGQSAPARLVLKDPPYFTVLPGWEYRQEAGRELLIPCAAAGDPFPVITWRKVGKPSRSKHNVLPSGSLQFRALSKEDHGEWECVATNVVTSITASTHLTVTGTSPHAPGSVRVQVSMTAANVSWEPGYDGGFEQTFSVWMKRAQFGPHDWLSLPVPLGPSWLLVDALEPETAYQFSVLAQNKLGASAFSEVVTVNTLAFPVTTPEPLVLVTPPRCLTANRTQQGVLLSWLPPANHSFPIDRYIMEFRVGERWETLEDAIPGTDGDFFARDLSQDTWYEFRVLAVMQDLVSEPSNIAGVSSTDIFPQPDLTEDGLARPVLAGIVATICFLAAAILFSTLAACFVNKQRKRKLKRKKDPPLSITHCRKSLESPLSSGKVSPESTRTLRAPSESSDDQGQPAAKRMLSPAREKELSLYKKTKRAIGSRKYSVAKAEAEAEATTPIELISRGPDGRFVMDPSEMEPSAKTRRIEGFPFAEETDMYPEFRQSDEENEDPLVPASVAALKSQLTPLSSSQESYLPPPAYSPRFQPRGLEGPGGLEGRLQATGQARPPAPRPFHHGQYYGYLSSSSPGEVEPPPFYMPEVGSPLSSVMSSPPLHAEGPFGHPTIPEENGENASNSTLPLTQTPTGGRSPEPWGRPEFPFGGLETPAMMFPHQLHPCDVPEGLQPAAGLPRGLPPAPLQVPAAYPGILSLEAPKGWAGKSPGRGPAPVPPAAKWQDRPVQPLVSQGQLRHTSQGMGIPVLPYPEPAEPGAHGGPSTLGLDTRWYEPQPRPRPSPRQARRAEPSLHQVVLQPSRLSPLTQSPLSSRTGSPELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSTGSPSQSSRSGSPSYRPTMGFTTLATGYPSPPPGPAGPTDNLDVFGQTPSSRRMGEELLRPEPPPPPLTTSGTQTPAPGNAAVPERLEALKYQRIKKPKKSSKGSSKSKRRSDGSASQAQRLPDPQVLWPDEAVCLRRKKRHSRPDPFARLSDLCHRQLPEDQTAILSSVEHDDPGHATLL
SIO_010081: IGSF9B
subclass of: SO_0000673
so part of: IGSF9B
location: join(502736..502799,511827..512024,513433..513579,518329..518480,518638..518755,519730..519871,520099..520244,522356..522498,522742..522882,522963..523079,523347..523497,524264..524375,526428..526603,527560..527786,528597..528681,530508..530669,531072..531117,531666..533315,540347..540468,543145..543353)
location: region:502736-543353:1
so has part: feature:502736-502799:1:exon
so has part: feature:511827-512024:1:exon
so has part: feature:513433-513579:1:exon
so has part: feature:518329-518480:1:exon
so has part: feature:518638-518755:1:exon
so has part: feature:519730-519871:1:exon
so has part: feature:520099-520244:1:exon
so has part: feature:522356-522498:1:exon
so has part: feature:522742-522882:1:exon
so has part: feature:522963-523079:1:exon
so has part: feature:523347-523497:1:exon
so has part: feature:524264-524375:1:exon
so has part: feature:526428-526603:1:exon
so has part: feature:527560-527786:1:exon
so has part: feature:528597-528681:1:exon
so has part: feature:530508-530669:1:exon
so has part: feature:531072-531117:1:exon
so has part: feature:531666-533315:1:exon
so has part: feature:540347-540468:1:exon
so has part: feature:543145-543353:1:exon

XP_031299218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502736-502799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511827-512024:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513433-513579:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518329-518480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518638-518755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519730-519871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:520099-520244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522356-522498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:522742-522882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522963-523079:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:523347-523497:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524264-524375:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:526428-526603:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527560-527786:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:528597-528681:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:530508-530669:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:531072-531117:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:531666-533315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:540347-540468:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543145-543353:1:exon

IGSF9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IGSF9B
product: immunoglobulin superfamily member 9B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031443359.1
SIO_010081: IGSF9B
subclass of: SO_0000673
so part of: IGSF9B
location: join(503117..505670,511827..512024,513433..513579,518329..518480,518638..518755,519730..519871,520099..520244,522356..522498,522742..522882,522963..523079,523347..523497,524264..524387,526428..526603,527560..527786,528597..528681,530508..530669,531072..531117,531666..533315,540347..540468,543145..554677)
location: region:503117-554677:1
so has part: feature:503117-505670:1:exon
so has part: feature:511827-512024:1:exon
so has part: feature:513433-513579:1:exon
so has part: feature:518329-518480:1:exon
so has part: feature:518638-518755:1:exon
so has part: feature:519730-519871:1:exon
so has part: feature:520099-520244:1:exon
so has part: feature:522356-522498:1:exon
so has part: feature:522742-522882:1:exon
so has part: feature:522963-523079:1:exon
so has part: feature:523347-523497:1:exon
so has part: feature:524264-524387:1:exon
so has part: feature:526428-526603:1:exon
so has part: feature:527560-527786:1:exon
so has part: feature:528597-528681:1:exon
so has part: feature:530508-530669:1:exon
so has part: feature:531072-531117:1:exon
so has part: feature:531666-533315:1:exon
so has part: feature:540347-540468:1:exon
so has part: feature:543145-554677:1:exon

position:503117:1
position: 503117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503117-505670:1:exon

position:505670:1
position: 505670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:511827-512024:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513433-513579:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518329-518480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518638-518755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519730-519871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:520099-520244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522356-522498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:522742-522882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522963-523079:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:523347-523497:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524264-524387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:526428-526603:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527560-527786:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:528597-528681:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:530508-530669:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:531072-531117:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:531666-533315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:540347-540468:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543145-554677:1:exon

IGSF9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IGSF9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein turtle homolog B isoform X3
translation: MCVPNTPAGGSARPPGRGAHGLREEPEFVTARAGESVVLRCDVVHPVTGQPPPYVVEWFKFGVPIPIFIKFGYYPPHVDPEYAGRASLHDKASLRLEQVRAEDQGWYECKVLLLDQQYDTFHNGSWVHLTINAPPTFTETPPQYIEAKEGSSVTMTCTAFGNPKPIVTWLKEGTLLGANGKYQVSDGSLTVTSVSREDRGAYTCRAYSIQGEAMHTTHLLVQGPPFIVSPPENITVNISQDALLTCRAEAYPGNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRVKPEDAGKYTCVPSNSLGRSPSASAYLTVQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATVVKWNKDGRPLQVEKNLGWTLLEDGSIRIEEATEEALGTYTCVPYNTLGTMGQSAPARLVLKDPPYFTVLPGWEYRQEAGRELLIPCAAAGDPFPVITWRKVGKPSRSKHNVLPSGSLQFRALSKEDHGEWECVATNVVTSITASTHLTVTGTSPHAPGSVRVQVSMTAANVSWEPGYDGGFEQTFSVWYGPLMKRAQFGPHDWLSLPVPLGPSWLLVDALEPETAYQFSVLAQNKLGASAFSEVVTVNTLAFPVTTPEPLVLVTPPRCLTANRTQQGVLLSWLPPANHSFPIDRYIMEFRVGERWETLEDAIPGTDGDFFARDLSQDTWYEFRVLAVMQDLVSEPSNIAGVSSTDIFPQPDLTEDGLARPVLAGIVATICFLAAAILFSTLAACFVNKQRKRKLKRKKDPPLSITHCRKSLESPLSSGKVSPESTRTLRAPSESSDDQGQPAAKRMLSPAREKELSLYKKTKRAIGSRKYSVAKAEAEAEATTPIELISRGPDGRFVMDPSEMEPSAKTRRIEGFPFAEETDMYPEFRQSDEENEDPLVPASVAALKSQLTPLSSSQESYLPPPAYSPRFQPRGLEGPGGLEGRLQATGQARPPAPRPFHHGQYYGYLSSSSPGEVEPPPFYMPEVGSPLSSVMSSPPLHAEGPFGHPTIPEENGENASNSTLPLTQTPTGGRSPEPWGRPEFPFGGLETPAMMFPHQLHPCDVPEGLQPAAGLPRGLPPAPLQVPAAYPGILSLEAPKGWAGKSPGRGPAPVPPAAKWQDRPVQPLVSQGQLRHTSQGMGIPVLPYPEPAEPGAHGGPSTLGLDTRWYEPQPRPRPSPRQARRAEPSLHQVVLQPSRLSPLTQSPLSSRTGSPELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSTGSPSQSSRSGSPSYRPTMGFTTLATGYPSPPPGPAGPTDNLDVFGQTPSSRRMGEELLRPEPPPPPLTTSGTQTPAPGNAAVPERLEALKYQRIKKPKKSSKGSSKSKRRSDGSASQAQRLPDPQVLWPDEAVCLRRKKRHSRPDPFARLSDLCHRQLPEDQTAILSSVEHDDPGHATLL
SIO_010081: IGSF9B
subclass of: SO_0000673
so part of: IGSF9B
location: join(505619..505670,511827..512024,513433..513579,518329..518480,518638..518755,519730..519871,520099..520244,522356..522498,522742..522882,522963..523079,523347..523497,524264..524387,526428..526603,527560..527786,528597..528681,530508..530669,531072..531117,531666..533315,540347..540468,543145..543353)
location: region:505619-543353:1
so has part: feature:505619-505670:1:exon
so has part: feature:511827-512024:1:exon
so has part: feature:513433-513579:1:exon
so has part: feature:518329-518480:1:exon
so has part: feature:518638-518755:1:exon
so has part: feature:519730-519871:1:exon
so has part: feature:520099-520244:1:exon
so has part: feature:522356-522498:1:exon
so has part: feature:522742-522882:1:exon
so has part: feature:522963-523079:1:exon
so has part: feature:523347-523497:1:exon
so has part: feature:524264-524387:1:exon
so has part: feature:526428-526603:1:exon
so has part: feature:527560-527786:1:exon
so has part: feature:528597-528681:1:exon
so has part: feature:530508-530669:1:exon
so has part: feature:531072-531117:1:exon
so has part: feature:531666-533315:1:exon
so has part: feature:540347-540468:1:exon
so has part: feature:543145-543353:1:exon

XP_031299219.1
type: Protein
SIO_000068: ncbiprotein

position:505619:1
position: 505619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505619-505670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511827-512024:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513433-513579:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518329-518480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518638-518755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519730-519871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:520099-520244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522356-522498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:522742-522882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522963-523079:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:523347-523497:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524264-524387:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:526428-526603:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527560-527786:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:528597-528681:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:530508-530669:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:531072-531117:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:531666-533315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:540347-540468:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543145-543353:1:exon

OPCML
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: OPCML
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1257019..1704075
location: region:1257019-1704075:1
so has part: feature:1257019-1704075:1:exon
subclass of: SO_0000010

105094288
type: Gene
SIO_000068: ncbigene

position:1257019:1
position: 1257019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1704075:1
position: 1704075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1257019-1704075:1:exon

OPCML
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: OPCML
product: opioid binding protein/cell adhesion molecule like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031443360.1
SIO_010081: OPCML
subclass of: SO_0000673
so part of: OPCML
location: join(1257019..1257700,1484921..1485146,1541622..1541629,1587676..1587798,1686130..1686267,1686623..1686743,1687200..1687351,1698893..1704075)
location: region:1257019-1704075:1
so has part: feature:1257019-1257700:1:exon
so has part: feature:1484921-1485146:1:exon
so has part: feature:1541622-1541629:1:exon
so has part: feature:1587676-1587798:1:exon
so has part: feature:1686130-1686267:1:exon
so has part: feature:1686623-1686743:1:exon
so has part: feature:1687200-1687351:1:exon
so has part: feature:1698893-1704075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1257019-1257700:1:exon

position:1257700:1
position: 1257700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1484921-1485146:1:exon

position:1484921:1
position: 1484921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1485146:1
position: 1485146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1541622-1541629:1:exon

position:1541622:1
position: 1541622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1541629:1
position: 1541629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1587676-1587798:1:exon

position:1587676:1
position: 1587676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587798:1
position: 1587798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1686130-1686267:1:exon

position:1686130:1
position: 1686130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686267:1
position: 1686267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1686623-1686743:1:exon

position:1686623:1
position: 1686623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686743:1
position: 1686743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1687200-1687351:1:exon

position:1687200:1
position: 1687200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687351:1
position: 1687351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1698893-1704075:1:exon

position:1698893:1
position: 1698893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OPCML
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: OPCML
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: opioid-binding protein/cell adhesion molecule
translation: MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCTIDDRVTRVAWLNRSTILYAGNDKWSIDPRVIILVNTPTQYSIMIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQLPPQIMNISSDVTVNEGSRVTXLCLAIGRXEPTVTWRHLSVKEGQGFVSEDEYLEISDIKRDQSGDYECSALNDVAAPDVRKVKITVNYPPYISKAKNTGVSVGQKGMLSCEAPAVPVAEFQWFKEDTRLATGLEGVRIENKGHISTLTFFNVSEKDYGNYTCVATNKLGNTNASITLYGPGAVIDGVNSASRALAGLWLSGTLFAHFFIKF
SIO_010081: OPCML
subclass of: SO_0000673
so part of: OPCML
location: join(1257534..1257700,1484921..1485146,1541622..1541629,1587676..1587798,1686130..1686267,1686623..1686743,1687200..1687351,1698893..1698993)
location: region:1257534-1698993:1
so has part: feature:1257534-1257700:1:exon
so has part: feature:1484921-1485146:1:exon
so has part: feature:1541622-1541629:1:exon
so has part: feature:1587676-1587798:1:exon
so has part: feature:1686130-1686267:1:exon
so has part: feature:1686623-1686743:1:exon
so has part: feature:1687200-1687351:1:exon
so has part: feature:1698893-1698993:1:exon

XP_031299220.1
type: Protein
SIO_000068: ncbiprotein

position:1257534:1
position: 1257534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698993:1
position: 1698993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1257534-1257700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1484921-1485146:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1541622-1541629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1587676-1587798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1686130-1686267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1686623-1686743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1687200-1687351:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1698893-1698993:1:exon

NTM
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: NTM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1751030..2542845)
location: region:1751030-2542845:-1
so has part: feature:1751030-2542845:-1:exon
subclass of: SO_0000010

105094287
type: Gene
SIO_000068: ncbigene

position:1751030:-1
position: 1751030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2542845:-1
position: 2542845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1751030-2542845:-1:exon

NTM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NTM
product: neurotrimin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_031443363.1
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1751030..1752027,1765152..1765306,1770404..1770524,1772371..1772505,1855795..1855920,1905490..1905722,2106657..2106741,2542443..2542845))
location: region:1751030-2542845:-1
so has part: feature:2542443-2542845:-1:exon
so has part: feature:2106657-2106741:-1:exon
so has part: feature:1905490-1905722:-1:exon
so has part: feature:1855795-1855920:-1:exon
so has part: feature:1772371-1772505:-1:exon
so has part: feature:1770404-1770524:-1:exon
so has part: feature:1765152-1765306:-1:exon
so has part: feature:1751030-1752027:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2542443-2542845:-1:exon

position:2542443:-1
position: 2542443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2106657-2106741:-1:exon

position:2106657:-1
position: 2106657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2106741:-1
position: 2106741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1905490-1905722:-1:exon

position:1905490:-1
position: 1905490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1905722:-1
position: 1905722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1855795-1855920:-1:exon

position:1855795:-1
position: 1855795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855920:-1
position: 1855920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1772371-1772505:-1:exon

position:1772371:-1
position: 1772371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1772505:-1
position: 1772505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1770404-1770524:-1:exon

position:1770404:-1
position: 1770404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1770524:-1
position: 1770524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1765152-1765306:-1:exon

position:1765152:-1
position: 1765152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1765306:-1
position: 1765306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1751030-1752027:-1:exon

position:1752027:-1
position: 1752027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NTM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NTM
product: neurotrimin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_031443362.1
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1751030..1751639,1751923..1752027,1765152..1765306,1770404..1770524,1772371..1772505,1855795..1855920,1905490..1905722,2106657..2107550))
location: region:1751030-2107550:-1
so has part: feature:2106657-2107550:-1:exon
so has part: feature:1905490-1905722:-1:exon
so has part: feature:1855795-1855920:-1:exon
so has part: feature:1772371-1772505:-1:exon
so has part: feature:1770404-1770524:-1:exon
so has part: feature:1765152-1765306:-1:exon
so has part: feature:1751923-1752027:-1:exon
so has part: feature:1751030-1751639:-1:exon

position:2107550:-1
position: 2107550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2106657-2107550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1905490-1905722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1855795-1855920:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1772371-1772505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1770404-1770524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1765152-1765306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1751923-1752027:-1:exon

position:1751923:-1
position: 1751923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1751030-1751639:-1:exon

position:1751639:-1
position: 1751639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NTM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NTM
product: neurotrimin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_031443361.1
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1751030..1751642,1751923..1752027,1765152..1765306,1770404..1770524,1772371..1772505,1855795..1855920,1905490..1905722,2106657..2107550))
location: region:1751030-2107550:-1
so has part: feature:2106657-2107550:-1:exon
so has part: feature:1905490-1905722:-1:exon
so has part: feature:1855795-1855920:-1:exon
so has part: feature:1772371-1772505:-1:exon
so has part: feature:1770404-1770524:-1:exon
so has part: feature:1765152-1765306:-1:exon
so has part: feature:1751923-1752027:-1:exon
so has part: feature:1751030-1751642:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2106657-2107550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1905490-1905722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1855795-1855920:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1772371-1772505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1770404-1770524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1765152-1765306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1751923-1752027:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1751030-1751642:-1:exon

position:1751642:-1
position: 1751642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NTM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NTM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrimin isoform X2
translation: MKTIQAKMHNSLSWAIFTGLAALFLFQGVPVRSGDATFPKAMDNVTVRQGESATLRCSIDNRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISSDVSINEGNNVSLTCIATGRPEPTVTWRHISPKAVGFVSEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGTLQCEASAVPSAEFQWYKDDKRLVEGRKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNKLGHTTPAHITLFGPGAVSEVSNGTPRRAGCARLLPLLVLHLLLLKF
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1751924..1752027,1765152..1765306,1770404..1770524,1772371..1772505,1855795..1855920,1905490..1905722,2106657..2106741,2542443..2542524))
location: region:1751924-2542524:-1
so has part: feature:2542443-2542524:-1:exon
so has part: feature:2106657-2106741:-1:exon
so has part: feature:1905490-1905722:-1:exon
so has part: feature:1855795-1855920:-1:exon
so has part: feature:1772371-1772505:-1:exon
so has part: feature:1770404-1770524:-1:exon
so has part: feature:1765152-1765306:-1:exon
so has part: feature:1751924-1752027:-1:exon

XP_031299223.1
type: Protein
SIO_000068: ncbiprotein

position:1751924:-1
position: 1751924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2542524:-1
position: 2542524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2542443-2542524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2106657-2106741:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1905490-1905722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1855795-1855920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1772371-1772505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1770404-1770524:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1765152-1765306:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1751924-1752027:-1:exon

NTM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NTM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrimin isoform X1
translation: MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCSIDNRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISSDVSINEGNNVSLTCIATGRPEPTVTWRHISPKAVGFVSEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGTLQCEASAVPSAEFQWYKDDKRLVEGRKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNKLGHTTPAHITLFGPGAVSEVSNGTPRRAGCARLLPLLVLHLLLLKF
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1751924..1752027,1765152..1765306,1770404..1770524,1772371..1772505,1855795..1855920,1905490..1905722,2106657..2106823))
location: region:1751924-2106823:-1
so has part: feature:2106657-2106823:-1:exon
so has part: feature:1905490-1905722:-1:exon
so has part: feature:1855795-1855920:-1:exon
so has part: feature:1772371-1772505:-1:exon
so has part: feature:1770404-1770524:-1:exon
so has part: feature:1765152-1765306:-1:exon
so has part: feature:1751924-1752027:-1:exon

XP_031299221.1
type: Protein
SIO_000068: ncbiprotein

position:2106823:-1
position: 2106823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2106657-2106823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1905490-1905722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1855795-1855920:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1772371-1772505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1770404-1770524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1765152-1765306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1751924-1752027:-1:exon

NTM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NTM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrimin isoform X1
translation: MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATLRCSIDNRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISSDVSINEGNNVSLTCIATGRPEPTVTWRHISPKAVGFVSEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQKGTLQCEASAVPSAEFQWYKDDKRLVEGRKGVKVENRPFLSKLIFFNVSEHDYGNYTCVASNKLGHTTPAHITLFGPGAVSEVSNGTPRRAGCARLLPLLVLHLLLLKF
SIO_010081: NTM
subclass of: SO_0000673
so part of: NTM
location: complement(join(1751924..1752027,1765152..1765306,1770404..1770524,1772371..1772505,1855795..1855920,1905490..1905722,2106657..2106823))
location: region:1751924-2106823:-1
so has part: feature:2106657-2106823:-1:exon
so has part: feature:1905490-1905722:-1:exon
so has part: feature:1855795-1855920:-1:exon
so has part: feature:1772371-1772505:-1:exon
so has part: feature:1770404-1770524:-1:exon
so has part: feature:1765152-1765306:-1:exon
so has part: feature:1751924-1752027:-1:exon

XP_031299222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2106657-2106823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1905490-1905722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1855795-1855920:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1772371-1772505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1770404-1770524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1765152-1765306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1751924-1752027:-1:exon

LOC116150268
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150268
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1843968..1844074)
location: region:1843968-1844074:-1
so has part: feature:1843968-1844074:-1:exon
subclass of: SO_0000623

116150268
type: Gene
SIO_000068: ncbigene

position:1843968:-1
position: 1843968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1844074:-1
position: 1844074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1843968-1844074:-1:exon

LOC116150268
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snRNA
gene: LOC116150268
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004133984.1
SIO_010081: LOC116150268
subclass of: SO_0000673
so part of: LOC116150268
location: complement(1843968..1844074)
location: region:1843968-1844074:-1
so has part: feature:1843968-1844074:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1843968-1844074:-1:exon

LOC116150155
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2699718..2722863
location: region:2699718-2722863:1
so has part: feature:2699718-2722863:1:exon
subclass of: SO_0000011

116150155
type: Gene
SIO_000068: ncbigene

position:2699718:1
position: 2699718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2722863:1
position: 2722863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2699718-2722863:1:exon

LOC116150155
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150155
product: uncharacterized LOC116150155
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004133796.1
SIO_010081: LOC116150155
subclass of: SO_0000673
so part of: LOC116150155
location: join(2699718..2699731,2706247..2706249,2721634..2722863)
location: region:2699718-2722863:1
so has part: feature:2699718-2699731:1:exon
so has part: feature:2706247-2706249:1:exon
so has part: feature:2721634-2722863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2699718-2699731:1:exon

position:2699731:1
position: 2699731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2706247-2706249:1:exon

position:2706247:1
position: 2706247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2706249:1
position: 2706249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2721634-2722863:1:exon

position:2721634:1
position: 2721634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116150156
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150156
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2731184..2757086)
location: region:2731184-2757086:-1
so has part: feature:2731184-2757086:-1:exon
subclass of: SO_0000011

116150156
type: Gene
SIO_000068: ncbigene

position:2731184:-1
position: 2731184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2757086:-1
position: 2757086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2731184-2757086:-1:exon

LOC116150156
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150156
product: uncharacterized LOC116150156, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004133798.1
SIO_010081: LOC116150156
subclass of: SO_0000673
so part of: LOC116150156
location: complement(join(2731184..2731394,2735052..2735302,2735734..2736131,2755853..2756047,2756714..2757086))
location: region:2731184-2757086:-1
so has part: feature:2756714-2757086:-1:exon
so has part: feature:2755853-2756047:-1:exon
so has part: feature:2735734-2736131:-1:exon
so has part: feature:2735052-2735302:-1:exon
so has part: feature:2731184-2731394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2756714-2757086:-1:exon

position:2756714:-1
position: 2756714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2755853-2756047:-1:exon

position:2755853:-1
position: 2755853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2756047:-1
position: 2756047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2735734-2736131:-1:exon

position:2735734:-1
position: 2735734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2736131:-1
position: 2736131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2735052-2735302:-1:exon

position:2735052:-1
position: 2735052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2735302:-1
position: 2735302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2731184-2731394:-1:exon

position:2731394:-1
position: 2731394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116150156
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150156
product: uncharacterized LOC116150156, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004133797.1
SIO_010081: LOC116150156
subclass of: SO_0000673
so part of: LOC116150156
location: complement(join(2731184..2731394,2735052..2735302,2735734..2736451))
location: region:2731184-2736451:-1
so has part: feature:2735734-2736451:-1:exon
so has part: feature:2735052-2735302:-1:exon
so has part: feature:2731184-2731394:-1:exon

position:2736451:-1
position: 2736451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2735734-2736451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2735052-2735302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2731184-2731394:-1:exon

SNX19
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SNX19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2858510..2898417
location: region:2858510-2898417:1
so has part: feature:2858510-2898417:1:exon
subclass of: SO_0000010

105094286
type: Gene
SIO_000068: ncbigene

position:2858510:1
position: 2858510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2898417:1
position: 2898417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2858510-2898417:1:exon

SNX19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SNX19
product: sorting nexin 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_010986289.2
SIO_010081: SNX19
subclass of: SO_0000673
so part of: SNX19
location: join(2858510..2860641,2862439..2862577,2863734..2863834,2863947..2864066,2865932..2866062,2867218..2867314,2867789..2867969,2870334..2870463,2892234..2892418,2893199..2893286,2894217..2898417)
location: region:2858510-2898417:1
so has part: feature:2858510-2860641:1:exon
so has part: feature:2862439-2862577:1:exon
so has part: feature:2863734-2863834:1:exon
so has part: feature:2863947-2864066:1:exon
so has part: feature:2865932-2866062:1:exon
so has part: feature:2867218-2867314:1:exon
so has part: feature:2867789-2867969:1:exon
so has part: feature:2870334-2870463:1:exon
so has part: feature:2892234-2892418:1:exon
so has part: feature:2893199-2893286:1:exon
so has part: feature:2894217-2898417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2858510-2860641:1:exon

position:2860641:1
position: 2860641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2862439-2862577:1:exon

position:2862439:1
position: 2862439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2862577:1
position: 2862577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2863734-2863834:1:exon

position:2863734:1
position: 2863734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2863834:1
position: 2863834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2863947-2864066:1:exon

position:2863947:1
position: 2863947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2864066:1
position: 2864066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2865932-2866062:1:exon

position:2865932:1
position: 2865932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2866062:1
position: 2866062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2867218-2867314:1:exon

position:2867218:1
position: 2867218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2867314:1
position: 2867314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2867789-2867969:1:exon

position:2867789:1
position: 2867789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2867969:1
position: 2867969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2870334-2870463:1:exon

position:2870334:1
position: 2870334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2870463:1
position: 2870463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2892234-2892418:1:exon

position:2892234:1
position: 2892234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2892418:1
position: 2892418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2893199-2893286:1:exon

position:2893199:1
position: 2893199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2893286:1
position: 2893286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2894217-2898417:1:exon

position:2894217:1
position: 2894217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNX19
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: SNX19
product: sorting nexin 19, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004133799.1
SIO_010081: SNX19
so part of: SNX19
location: join(2858510..2860641,2862439..2862577,2863734..2863834,2863947..2864066,2865932..2866062,2867218..2867314,2867789..2867969,2870334..2870463,2871389..2871529,2882219..2887070)
location: region:2858510-2887070:1
so has part: feature:2858510-2860641:1:exon
so has part: feature:2862439-2862577:1:exon
so has part: feature:2863734-2863834:1:exon
so has part: feature:2863947-2864066:1:exon
so has part: feature:2865932-2866062:1:exon
so has part: feature:2867218-2867314:1:exon
so has part: feature:2867789-2867969:1:exon
so has part: feature:2870334-2870463:1:exon
so has part: feature:2871389-2871529:1:exon
so has part: feature:2882219-2887070:1:exon

position:2887070:1
position: 2887070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2858510-2860641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2862439-2862577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2863734-2863834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2863947-2864066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2865932-2866062:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2867218-2867314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2867789-2867969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2870334-2870463:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2871389-2871529:1:exon

position:2871389:1
position: 2871389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2871529:1
position: 2871529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2882219-2887070:1:exon

position:2882219:1
position: 2882219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNX19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SNX19
product: sorting nexin 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_031443364.1
SIO_010081: SNX19
subclass of: SO_0000673
so part of: SNX19
location: join(2858510..2860641,2862439..2862577,2863734..2863834,2863947..2864066,2865932..2866062,2867218..2867314,2867789..2867969,2870334..2870463,2882219..2887070)
location: region:2858510-2887070:1
so has part: feature:2858510-2860641:1:exon
so has part: feature:2862439-2862577:1:exon
so has part: feature:2863734-2863834:1:exon
so has part: feature:2863947-2864066:1:exon
so has part: feature:2865932-2866062:1:exon
so has part: feature:2867218-2867314:1:exon
so has part: feature:2867789-2867969:1:exon
so has part: feature:2870334-2870463:1:exon
so has part: feature:2882219-2887070:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2858510-2860641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2862439-2862577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2863734-2863834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2863947-2864066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2865932-2866062:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2867218-2867314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2867789-2867969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2870334-2870463:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2882219-2887070:1:exon

SNX19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SNX19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-19 isoform X1
translation: MKAEAAASSQEPPTGPDGGVSNLLSSRKLVAVGAVLGWLLVIHLLVNVWLLCLLSALLVVLGGWLGSDAIVGASGRLHLERFIPMATSPPSPEAERQLEQEIDRTIRMIMRDFVSSWYRTVSQEPAFEEEMEAAMRGLVQELRRRMAMVDRHALAQRVLTLCGCHLQSYIQAKEATAGQQSGTVEPSQLWEAYCRVTAPHPAVQSPSAEVTYTRGIVNAVLQGLVPKPHLETRTGRHVVVELITCNVILPLTSKLSDPDWIHLVLVGIFSKARNNPEEVVKPLCPASALEQPSVPTSLPLTVEEQSPPEVRAPSPAAAPLLLNCSEPEGPPHPSPEVEEGCEALEGDLGEVLEERKVGNNSSHFLQPDIRGPLFLCDDTELESPLSELGKETIMLMTPGSFLCDRIQDALCALGGSQSLESKDGERARGIEGAEAEEGPGTEAETGLLVSMLNSCPEIQIDAADKEAEQGDVTSHTTLLASPERTCPSRPSCLEKDLTDGVSSLDPSLPQVLLSSSPPGPLSSATFSFEPLSSPDGPVVIQNLRITGTITAREHSGTGFHPYTLYTVKYETALDGESSGGLQQLAYHTVNRRYREFLNLQTRLEEKSDLRKFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFLKQLCAIPELANSEEVQEFLALNTDARIAFVKKPFVGSRIDKTVVSAIVDTLKTAFPRSEPQSPTEELSEAETENRLQTEGKKASKSRLRFSSSKISPALSISETHEKILYCFREGGVESEILSTSGMESFIEKQTKLLEMQPADAPGKDSEQISEGCVAGHVSDAALPAQDLGSSDPGAETELADTALDLLLLLLMEQWRWLCTENMRKVLHLIFGTLIQRWLEVQVANLTSPRRWVQYLRLLQESVWPGGVLPKCPRPVRTQEQKVAAEKQALQSLMGVLPDVVVEILGVNRCRLGWSLVLESLQQPLIDRHLVYCLWDVILEFLDLSACAEGSPTAASASDPPGKPKKTGVSS
SIO_010081: SNX19
subclass of: SO_0000673
so part of: SNX19
location: join(2858938..2860641,2862439..2862577,2863734..2863834,2863947..2864066,2865932..2866062,2867218..2867314,2867789..2867969,2870334..2870463,2892234..2892418,2893199..2893286,2894217..2894349)
location: region:2858938-2894349:1
so has part: feature:2858938-2860641:1:exon
so has part: feature:2862439-2862577:1:exon
so has part: feature:2863734-2863834:1:exon
so has part: feature:2863947-2864066:1:exon
so has part: feature:2865932-2866062:1:exon
so has part: feature:2867218-2867314:1:exon
so has part: feature:2867789-2867969:1:exon
so has part: feature:2870334-2870463:1:exon
so has part: feature:2892234-2892418:1:exon
so has part: feature:2893199-2893286:1:exon
so has part: feature:2894217-2894349:1:exon

XP_010984591.2
type: Protein
SIO_000068: ncbiprotein

position:2858938:1
position: 2858938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2894349:1
position: 2894349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2858938-2860641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2862439-2862577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2863734-2863834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2863947-2864066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2865932-2866062:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2867218-2867314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2867789-2867969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2870334-2870463:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2892234-2892418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2893199-2893286:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2894217-2894349:1:exon

SNX19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SNX19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-19 isoform X2
translation: MKAEAAASSQEPPTGPDGGVSNLLSSRKLVAVGAVLGWLLVIHLLVNVWLLCLLSALLVVLGGWLGSDAIVGASGRLHLERFIPMATSPPSPEAERQLEQEIDRTIRMIMRDFVSSWYRTVSQEPAFEEEMEAAMRGLVQELRRRMAMVDRHALAQRVLTLCGCHLQSYIQAKEATAGQQSGTVEPSQLWEAYCRVTAPHPAVQSPSAEVTYTRGIVNAVLQGLVPKPHLETRTGRHVVVELITCNVILPLTSKLSDPDWIHLVLVGIFSKARNNPEEVVKPLCPASALEQPSVPTSLPLTVEEQSPPEVRAPSPAAAPLLLNCSEPEGPPHPSPEVEEGCEALEGDLGEVLEERKVGNNSSHFLQPDIRGPLFLCDDTELESPLSELGKETIMLMTPGSFLCDRIQDALCALGGSQSLESKDGERARGIEGAEAEEGPGTEAETGLLVSMLNSCPEIQIDAADKEAEQGDVTSHTTLLASPERTCPSRPSCLEKDLTDGVSSLDPSLPQVLLSSSPPGPLSSATFSFEPLSSPDGPVVIQNLRITGTITAREHSGTGFHPYTLYTVKYETALDGESSGGLQQLAYHTVNRRYREFLNLQTRLEEKSDLRKFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFLKQLCAIPELANSEEVQEFLALNTDARIAFVKKPFVGSRIDKTVVSAIVDTLKTAFPRSEPQSPTEELSEAETENRLQTEGKKASKSRLRFSSSKISPALSISETHEKILYCFREGGVESEILSTSGMESFIEKQTKLLEMQPADAPGKDSEQISEGCVAGHVSDAALPAQDLGSSDPGAETELADTALDLLLLLLMEQWRWLCTENMRKVLHLIFGTLIQSDFGKQSRQEVVRLLRRRPVAESPFDF
SIO_010081: SNX19
subclass of: SO_0000673
so part of: SNX19
location: join(2858938..2860641,2862439..2862577,2863734..2863834,2863947..2864066,2865932..2866062,2867218..2867314,2867789..2867969,2870334..2870463,2882219..2882300)
location: region:2858938-2882300:1
so has part: feature:2858938-2860641:1:exon
so has part: feature:2862439-2862577:1:exon
so has part: feature:2863734-2863834:1:exon
so has part: feature:2863947-2864066:1:exon
so has part: feature:2865932-2866062:1:exon
so has part: feature:2867218-2867314:1:exon
so has part: feature:2867789-2867969:1:exon
so has part: feature:2870334-2870463:1:exon
so has part: feature:2882219-2882300:1:exon

XP_031299224.1
type: Protein
SIO_000068: ncbiprotein

position:2882300:1
position: 2882300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2858938-2860641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2862439-2862577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2863734-2863834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2863947-2864066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2865932-2866062:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2867218-2867314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2867789-2867969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2870334-2870463:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2882219-2882300:1:exon

LOC105094285
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105094285
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2898687..2912529)
location: region:2898687-2912529:-1
so has part: feature:2898687-2912529:-1:exon
subclass of: SO_0000011

105094285
type: Gene
SIO_000068: ncbigene

position:2898687:-1
position: 2898687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2912529:-1
position: 2912529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2898687-2912529:-1:exon

LOC105094285
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105094285
product: uncharacterized LOC105094285
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_837641.2
SIO_010081: LOC105094285
subclass of: SO_0000673
so part of: LOC105094285
location: complement(join(2898687..2900075,2903186..2903340,2905729..2905927,2911949..2912529))
location: region:2898687-2912529:-1
so has part: feature:2911949-2912529:-1:exon
so has part: feature:2905729-2905927:-1:exon
so has part: feature:2903186-2903340:-1:exon
so has part: feature:2898687-2900075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2911949-2912529:-1:exon

position:2911949:-1
position: 2911949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2905729-2905927:-1:exon

position:2905729:-1
position: 2905729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2905927:-1
position: 2905927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2903186-2903340:-1:exon

position:2903186:-1
position: 2903186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2903340:-1
position: 2903340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2898687-2900075:-1:exon

position:2900075:-1
position: 2900075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116150157
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2913386..2929735)
location: region:2913386-2929735:-1
so has part: feature:2913386-2929735:-1:exon
subclass of: SO_0000011

116150157
type: Gene
SIO_000068: ncbigene

position:2913386:-1
position: 2913386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2929735:-1
position: 2929735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2913386-2929735:-1:exon

LOC116150157
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150157
product: uncharacterized LOC116150157
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004133800.1
SIO_010081: LOC116150157
subclass of: SO_0000673
so part of: LOC116150157
location: complement(join(2913386..2914625,2914723..2915197,2915400..2915742,2916662..2916881,2918675..2920289,2920416..2920513,2927478..2929735))
location: region:2913386-2929735:-1
so has part: feature:2927478-2929735:-1:exon
so has part: feature:2920416-2920513:-1:exon
so has part: feature:2918675-2920289:-1:exon
so has part: feature:2916662-2916881:-1:exon
so has part: feature:2915400-2915742:-1:exon
so has part: feature:2914723-2915197:-1:exon
so has part: feature:2913386-2914625:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2927478-2929735:-1:exon

position:2927478:-1
position: 2927478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2920416-2920513:-1:exon

position:2920416:-1
position: 2920416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2920513:-1
position: 2920513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2918675-2920289:-1:exon

position:2918675:-1
position: 2918675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2920289:-1
position: 2920289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2916662-2916881:-1:exon

position:2916662:-1
position: 2916662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2916881:-1
position: 2916881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2915400-2915742:-1:exon

position:2915400:-1
position: 2915400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2915742:-1
position: 2915742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2914723-2915197:-1:exon

position:2914723:-1
position: 2914723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2915197:-1
position: 2915197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2913386-2914625:-1:exon

position:2914625:-1
position: 2914625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116150158
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150158
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2943674..2962143
location: region:2943674-2962143:1
so has part: feature:2943674-2962143:1:exon
subclass of: SO_0000011

116150158
type: Gene
SIO_000068: ncbigene

position:2943674:1
position: 2943674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2962143:1
position: 2962143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2943674-2962143:1:exon

LOC116150158
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150158
product: uncharacterized LOC116150158, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004133801.1
SIO_010081: LOC116150158
subclass of: SO_0000673
so part of: LOC116150158
location: join(2943674..2943811,2943937..2944071,2944290..2944387,2945473..2945636,2948832..2948989,2952378..2952560,2953778..2953931,2956317..2959185,2959959..2962143)
location: region:2943674-2962143:1
so has part: feature:2943674-2943811:1:exon
so has part: feature:2943937-2944071:1:exon
so has part: feature:2944290-2944387:1:exon
so has part: feature:2945473-2945636:1:exon
so has part: feature:2948832-2948989:1:exon
so has part: feature:2952378-2952560:1:exon
so has part: feature:2953778-2953931:1:exon
so has part: feature:2956317-2959185:1:exon
so has part: feature:2959959-2962143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2943674-2943811:1:exon

position:2943811:1
position: 2943811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2943937-2944071:1:exon

position:2943937:1
position: 2943937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2944071:1
position: 2944071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2944290-2944387:1:exon

position:2944290:1
position: 2944290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2944387:1
position: 2944387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2945473-2945636:1:exon

position:2945473:1
position: 2945473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2945636:1
position: 2945636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2948832-2948989:1:exon

position:2948832:1
position: 2948832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2948989:1
position: 2948989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2952378-2952560:1:exon

position:2952378:1
position: 2952378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2952560:1
position: 2952560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2953778-2953931:1:exon

position:2953778:1
position: 2953778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2953931:1
position: 2953931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2956317-2959185:1:exon

position:2956317:1
position: 2956317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2959185:1
position: 2959185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2959959-2962143:1:exon

position:2959959:1
position: 2959959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116150158
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150158
product: uncharacterized LOC116150158, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004133803.1
SIO_010081: LOC116150158
subclass of: SO_0000673
so part of: LOC116150158
location: join(2943674..2943811,2943937..2944071,2944290..2944387,2945473..2945636,2948832..2948989,2952378..2952560,2953778..2953931,2956317..2956495,2959075..2959185,2959959..2962143)
location: region:2943674-2962143:1
so has part: feature:2943674-2943811:1:exon
so has part: feature:2943937-2944071:1:exon
so has part: feature:2944290-2944387:1:exon
so has part: feature:2945473-2945636:1:exon
so has part: feature:2948832-2948989:1:exon
so has part: feature:2952378-2952560:1:exon
so has part: feature:2953778-2953931:1:exon
so has part: feature:2956317-2956495:1:exon
so has part: feature:2959075-2959185:1:exon
so has part: feature:2959959-2962143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2943674-2943811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2943937-2944071:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2944290-2944387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2945473-2945636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2948832-2948989:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952378-2952560:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2953778-2953931:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2956317-2956495:1:exon

position:2956495:1
position: 2956495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2959075-2959185:1:exon

position:2959075:1
position: 2959075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2959959-2962143:1:exon

LOC116150158
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150158
product: uncharacterized LOC116150158, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004133802.1
SIO_010081: LOC116150158
subclass of: SO_0000673
so part of: LOC116150158
location: join(2943674..2943811,2943937..2944071,2944290..2944387,2945473..2945636,2948832..2948989,2952378..2952560,2956317..2959185,2959959..2962143)
location: region:2943674-2962143:1
so has part: feature:2943674-2943811:1:exon
so has part: feature:2943937-2944071:1:exon
so has part: feature:2944290-2944387:1:exon
so has part: feature:2945473-2945636:1:exon
so has part: feature:2948832-2948989:1:exon
so has part: feature:2952378-2952560:1:exon
so has part: feature:2956317-2959185:1:exon
so has part: feature:2959959-2962143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2943674-2943811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2943937-2944071:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2944290-2944387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2945473-2945636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2948832-2948989:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952378-2952560:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2956317-2959185:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2959959-2962143:1:exon

LOC116150158
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150158
product: uncharacterized LOC116150158, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004133804.1
SIO_010081: LOC116150158
subclass of: SO_0000673
so part of: LOC116150158
location: join(2943674..2943811,2943937..2944071,2944290..2944387,2945473..2945636,2948832..2948989,2952378..2952560,2959075..2959185,2959959..2962143)
location: region:2943674-2962143:1
so has part: feature:2943674-2943811:1:exon
so has part: feature:2943937-2944071:1:exon
so has part: feature:2944290-2944387:1:exon
so has part: feature:2945473-2945636:1:exon
so has part: feature:2948832-2948989:1:exon
so has part: feature:2952378-2952560:1:exon
so has part: feature:2959075-2959185:1:exon
so has part: feature:2959959-2962143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2943674-2943811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2943937-2944071:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2944290-2944387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2945473-2945636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2948832-2948989:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952378-2952560:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2959075-2959185:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2959959-2962143:1:exon

LOC105094293
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105094293
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2946974..3040116)
location: region:2946974-3040116:-1
so has part: feature:2946974-3040116:-1:exon
subclass of: SO_0000011

105094293
type: Gene
SIO_000068: ncbigene

position:2946974:-1
position: 2946974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3040116:-1
position: 3040116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2946974-3040116:-1:exon

LOC105094293
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105094293
product: uncharacterized LOC105094293, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004133807.1
SIO_010081: LOC105094293
subclass of: SO_0000673
so part of: LOC105094293
location: complement(join(2946974..2947319,2951032..2951192,2957268..2957393,2957747..2958034,2958338..2958612,2973556..2973686,2985627..2986707,2987155..2991464,2991899..2992719,2997694..2997845,3040014..3040116))
location: region:2946974-3040116:-1
so has part: feature:3040014-3040116:-1:exon
so has part: feature:2997694-2997845:-1:exon
so has part: feature:2991899-2992719:-1:exon
so has part: feature:2987155-2991464:-1:exon
so has part: feature:2985627-2986707:-1:exon
so has part: feature:2973556-2973686:-1:exon
so has part: feature:2958338-2958612:-1:exon
so has part: feature:2957747-2958034:-1:exon
so has part: feature:2957268-2957393:-1:exon
so has part: feature:2951032-2951192:-1:exon
so has part: feature:2946974-2947319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3040014-3040116:-1:exon

position:3040014:-1
position: 3040014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2997694-2997845:-1:exon

position:2997694:-1
position: 2997694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2997845:-1
position: 2997845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2991899-2992719:-1:exon

position:2991899:-1
position: 2991899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2992719:-1
position: 2992719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2987155-2991464:-1:exon

position:2987155:-1
position: 2987155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2991464:-1
position: 2991464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2985627-2986707:-1:exon

position:2985627:-1
position: 2985627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2986707:-1
position: 2986707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2973556-2973686:-1:exon

position:2973556:-1
position: 2973556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2973686:-1
position: 2973686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2958338-2958612:-1:exon

position:2958338:-1
position: 2958338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2958612:-1
position: 2958612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2957747-2958034:-1:exon

position:2957747:-1
position: 2957747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2958034:-1
position: 2958034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2957268-2957393:-1:exon

position:2957268:-1
position: 2957268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2957393:-1
position: 2957393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2951032-2951192:-1:exon

position:2951032:-1
position: 2951032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2951192:-1
position: 2951192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2946974-2947319:-1:exon

position:2947319:-1
position: 2947319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105094293
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105094293
product: uncharacterized LOC105094293, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004133806.1
SIO_010081: LOC105094293
subclass of: SO_0000673
so part of: LOC105094293
location: complement(join(2946974..2947319,2951032..2951192,2957268..2957393,2957883..2958034,2958338..2958612,2973556..2973686,2985627..2991464,2991899..2992719,2997694..2997845,3040014..3040116))
location: region:2946974-3040116:-1
so has part: feature:3040014-3040116:-1:exon
so has part: feature:2997694-2997845:-1:exon
so has part: feature:2991899-2992719:-1:exon
so has part: feature:2985627-2991464:-1:exon
so has part: feature:2973556-2973686:-1:exon
so has part: feature:2958338-2958612:-1:exon
so has part: feature:2957883-2958034:-1:exon
so has part: feature:2957268-2957393:-1:exon
so has part: feature:2951032-2951192:-1:exon
so has part: feature:2946974-2947319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3040014-3040116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2997694-2997845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2991899-2992719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2985627-2991464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2973556-2973686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2958338-2958612:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2957883-2958034:-1:exon

position:2957883:-1
position: 2957883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2957268-2957393:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2951032-2951192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946974-2947319:-1:exon

LOC105094293
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105094293
product: uncharacterized LOC105094293, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004133805.1
SIO_010081: LOC105094293
subclass of: SO_0000673
so part of: LOC105094293
location: complement(join(2946974..2947319,2951032..2951192,2957268..2957393,2957747..2958034,2958338..2958612,2973556..2973686,2985627..2991464,2991899..2992719,2997694..2997845,3040014..3040116))
location: region:2946974-3040116:-1
so has part: feature:3040014-3040116:-1:exon
so has part: feature:2997694-2997845:-1:exon
so has part: feature:2991899-2992719:-1:exon
so has part: feature:2985627-2991464:-1:exon
so has part: feature:2973556-2973686:-1:exon
so has part: feature:2958338-2958612:-1:exon
so has part: feature:2957747-2958034:-1:exon
so has part: feature:2957268-2957393:-1:exon
so has part: feature:2951032-2951192:-1:exon
so has part: feature:2946974-2947319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3040014-3040116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2997694-2997845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2991899-2992719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2985627-2991464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2973556-2973686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2958338-2958612:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2957747-2958034:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2957268-2957393:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2951032-2951192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2946974-2947319:-1:exon

TRNAG-ACC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAG-ACC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3078604..3078675
location: region:3078604-3078675:1
so has part: feature:3078604-3078675:1:exon
subclass of: SO_0000663

116150277
type: Gene
SIO_000068: ncbigene

position:3078604:1
position: 3078604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3078675:1
position: 3078675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3078604-3078675:1:exon

TRNAG-ACC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAG-ACC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon ACC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3078636..3078638,aa:Gly,seq:acc)
SIO_010081: TRNAG-ACC
subclass of: SO_0000673
so part of: TRNAG-ACC
location: 3078604..3078675
location: region:3078604-3078675:1
so has part: feature:3078604-3078675:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3078604-3078675:1:exon

LOC116150160
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3108238..3114199
location: region:3108238-3114199:1
so has part: feature:3108238-3114199:1:exon
subclass of: SO_0000011

116150160
type: Gene
SIO_000068: ncbigene

position:3108238:1
position: 3108238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3114199:1
position: 3114199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3108238-3114199:1:exon

LOC116150160
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150160
product: uncharacterized LOC116150160
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004133809.1
SIO_010081: LOC116150160
subclass of: SO_0000673
so part of: LOC116150160
location: join(3108238..3108457,3111756..3114199)
location: region:3108238-3114199:1
so has part: feature:3108238-3108457:1:exon
so has part: feature:3111756-3114199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3108238-3108457:1:exon

position:3108457:1
position: 3108457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3111756-3114199:1:exon

position:3111756:1
position: 3111756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAG-UCC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAG-UCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3154365..3154436
location: region:3154365-3154436:1
so has part: feature:3154365-3154436:1:exon
subclass of: SO_0000663

116150286
type: Gene
SIO_000068: ncbigene

position:3154365:1
position: 3154365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3154436:1
position: 3154436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3154365-3154436:1:exon

TRNAG-UCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAG-UCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3154397..3154399,aa:Gly,seq:tcc)
SIO_010081: TRNAG-UCC
subclass of: SO_0000673
so part of: TRNAG-UCC
location: 3154365..3154436
location: region:3154365-3154436:1
so has part: feature:3154365-3154436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3154365-3154436:1:exon

LOC116150159
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3165897..3168347)
location: region:3165897-3168347:-1
so has part: feature:3165897-3168347:-1:exon
subclass of: SO_0000011

116150159
type: Gene
SIO_000068: ncbigene

position:3165897:-1
position: 3165897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3168347:-1
position: 3168347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3165897-3168347:-1:exon

LOC116150159
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150159
product: uncharacterized LOC116150159
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004133808.1
SIO_010081: LOC116150159
subclass of: SO_0000673
so part of: LOC116150159
location: complement(join(3165897..3166596,3168212..3168347))
location: region:3165897-3168347:-1
so has part: feature:3168212-3168347:-1:exon
so has part: feature:3165897-3166596:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3168212-3168347:-1:exon

position:3168212:-1
position: 3168212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3165897-3166596:-1:exon

position:3166596:-1
position: 3166596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116150161
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3188707..3191841
location: region:3188707-3191841:1
so has part: feature:3188707-3191841:1:exon
subclass of: SO_0000011

116150161
type: Gene
SIO_000068: ncbigene

position:3188707:1
position: 3188707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3191841:1
position: 3191841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3188707-3191841:1:exon

LOC116150161
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150161
product: uncharacterized LOC116150161
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004133810.1
SIO_010081: LOC116150161
subclass of: SO_0000673
so part of: LOC116150161
location: join(3188707..3189027,3190397..3191841)
location: region:3188707-3191841:1
so has part: feature:3188707-3189027:1:exon
so has part: feature:3190397-3191841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3188707-3189027:1:exon

position:3189027:1
position: 3189027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3190397-3191841:1:exon

position:3190397:1
position: 3190397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADAMTS15
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ADAMTS15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3203383..3224535)
location: region:3203383-3224535:-1
so has part: feature:3203383-3224535:-1:exon
subclass of: SO_0000010

105094283
type: Gene
SIO_000068: ncbigene

position:3203383:-1
position: 3203383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3224535:-1
position: 3224535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3203383-3224535:-1:exon

ADAMTS15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ADAMTS15
product: ADAM metallopeptidase with thrombospondin type 1 motif 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_010986288.2
SIO_010081: ADAMTS15
subclass of: SO_0000673
so part of: ADAMTS15
location: complement(join(3203383..3206835,3208310..3208485,3208653..3208834,3209839..3210016,3212358..3212641,3212847..3213014,3213454..3213586,3223224..3224535))
location: region:3203383-3224535:-1
so has part: feature:3223224-3224535:-1:exon
so has part: feature:3213454-3213586:-1:exon
so has part: feature:3212847-3213014:-1:exon
so has part: feature:3212358-3212641:-1:exon
so has part: feature:3209839-3210016:-1:exon
so has part: feature:3208653-3208834:-1:exon
so has part: feature:3208310-3208485:-1:exon
so has part: feature:3203383-3206835:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3223224-3224535:-1:exon

position:3223224:-1
position: 3223224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3213454-3213586:-1:exon

position:3213454:-1
position: 3213454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3213586:-1
position: 3213586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3212847-3213014:-1:exon

position:3212847:-1
position: 3212847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3213014:-1
position: 3213014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3212358-3212641:-1:exon

position:3212358:-1
position: 3212358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3212641:-1
position: 3212641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3209839-3210016:-1:exon

position:3209839:-1
position: 3209839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3210016:-1
position: 3210016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3208653-3208834:-1:exon

position:3208653:-1
position: 3208653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3208834:-1
position: 3208834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3208310-3208485:-1:exon

position:3208310:-1
position: 3208310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3208485:-1
position: 3208485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3203383-3206835:-1:exon

position:3206835:-1
position: 3206835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAMTS15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ADAMTS15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 15
translation: MLLLGILTLALAGALAGVSEPEQEVVVPIRLDPDINGRHYYWRGPEDSEDQGLIFQITAFQEDFYLHLTPDAQFLAPAFATEHLGVPLQGLIESSPDLRRCFYSGDVNSEPDSFAAVSLCGGLRGAFGYRGAEYVISPLPNASAPAAQRNSQGAHLLQRRGTPGGPPGDPTSRCGVASGWNPAILRALDPYKPRRNSLGEGHSHRRSGRAKRFVSIPRYVETLVVADESMVKFHGADLEHYLLTLLATAARLYRHPSILNPISIVVVKVLLLGDRDTGPKVTGNAALTLRNFCAWQKKLNEVSDKHPEYWDTAILFTRQDLCGATTCDTLGMADVGTMCDPKRSCSVIEDDGLPSAFTTAHELGHVFNMPHDNVKVCEEVFGKLRANHMMSPTLIQIDRANPWSACSAAIITDFLDSGHGDCLLDQPSKPIALPEDLPGASYTLSQQCELAFGVGSKPCPYMQYCTKLWCTGKARGQMVCQTRHFPWADGTGCGEGKFCLKGACVERHDLHRYRVDGSWAKWEPYGPCSRTCGGGVQLARRQCSNPAPANGGKYCEGVRVKYRSCNLEPCPSSASGKSFREEQCEAFNGYNHSTNRLALTVAWVPKYSGVSPRDKCKLICRANGTGYFYVLAPKVVDGTLCTPDSTSVCVQGKCIKAGCDGNLGSKKKFDKCGVCGGDNKGCKKVSGLFTKPMHGYNFVVAIPAGASSIDIRQRGYKGLIGDDNYLALKNSQGKYLLNGHFVVSAVERDLVVKGSLLRYSGTGTAVESLQASRPILEPLTVEVLSVGKMTPPRVRYSFYLPKEPREDRLSPPKDPRAPSVLHNSVLSLSNQVEQPDARPSARWVAGSWGPCSASCGGGLQRRPVDCRGSPGPRRASVCDAAHRPAETRACGEPCPAWELGAWSPCSKSCGRGFKRRPLKCVGHRGRLLARDQCDLRRKPQELDFCMLRPC
SIO_010081: ADAMTS15
subclass of: SO_0000673
so part of: ADAMTS15
location: complement(join(3206061..3206835,3208310..3208485,3208653..3208834,3209839..3210016,3212358..3212641,3212847..3213014,3213454..3213586,3223224..3224180))
location: region:3206061-3224180:-1
so has part: feature:3223224-3224180:-1:exon
so has part: feature:3213454-3213586:-1:exon
so has part: feature:3212847-3213014:-1:exon
so has part: feature:3212358-3212641:-1:exon
so has part: feature:3209839-3210016:-1:exon
so has part: feature:3208653-3208834:-1:exon
so has part: feature:3208310-3208485:-1:exon
so has part: feature:3206061-3206835:-1:exon

XP_010984590.2
type: Protein
SIO_000068: ncbiprotein

position:3206061:-1
position: 3206061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3224180:-1
position: 3224180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3223224-3224180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3213454-3213586:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3212847-3213014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3212358-3212641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3209839-3210016:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3208653-3208834:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3208310-3208485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3206061-3206835:-1:exon

ADAMTS8
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ADAMTS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <3241610..3260591
location: region:3241610-3260591:1
so has part: feature:3241610-3260591:1:exon
subclass of: SO_0000010

105094282
type: Gene
SIO_000068: ncbigene

position:3241610:1
position: 3241610
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3260591:1
position: 3260591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3241610-3260591:1:exon

ADAMTS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ADAMTS8
product: ADAM metallopeptidase with thrombospondin type 1 motif 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_031443311.1
SIO_010081: ADAMTS8
subclass of: SO_0000673
so part of: ADAMTS8
location: join(<3241610..3242626,3249827..3250066,3250731..3250866,3251413..3251580,3252432..3252733,3254782..3254965,3257238..3257410,3257537..3257712,3259483..3260591)
location: region:3241610-3260591:1
so has part: feature:3241610-3242626:1:exon
so has part: feature:3249827-3250066:1:exon
so has part: feature:3250731-3250866:1:exon
so has part: feature:3251413-3251580:1:exon
so has part: feature:3252432-3252733:1:exon
so has part: feature:3254782-3254965:1:exon
so has part: feature:3257238-3257410:1:exon
so has part: feature:3257537-3257712:1:exon
so has part: feature:3259483-3260591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3241610-3242626:1:exon

position:3242626:1
position: 3242626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3249827-3250066:1:exon

position:3249827:1
position: 3249827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3250066:1
position: 3250066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3250731-3250866:1:exon

position:3250731:1
position: 3250731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3250866:1
position: 3250866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3251413-3251580:1:exon

position:3251413:1
position: 3251413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3251580:1
position: 3251580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3252432-3252733:1:exon

position:3252432:1
position: 3252432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3252733:1
position: 3252733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3254782-3254965:1:exon

position:3254782:1
position: 3254782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3254965:1
position: 3254965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3257238-3257410:1:exon

position:3257238:1
position: 3257238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3257410:1
position: 3257410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3257537-3257712:1:exon

position:3257537:1
position: 3257537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3257712:1
position: 3257712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3259483-3260591:1:exon

position:3259483:1
position: 3259483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADAMTS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ADAMTS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 8
translation: IRRARQPARCFPGWGGGGGGGRARGPSASCSRSAGAAAAPARGAARGPPPQAATRARPRSLSFPGGPAAVAARTCQRRARFLLSRPRRSPHAPARPPVAPPCCSCRCSLPAAAAAARPRRPGPARRRGPASALVVPTQLPTGAGELALHLSAFGQGFVLRLAPDASFLAPEFKIERLGGSGGAAGGERELRGCFFSGTVNGEPESLAAFSLCRGLSGSFLLDGEEFTIQPQGAGDSLHQPHRLQRWGPGRAAAEAQPLPGAPEWEVEKGEGQRQESGAHAHEEDEDEESKEEEAEGASELPPTLGATSRTKRFVSEARFVETLLVADASMARFYGADLQNHILTLMSVAARVYKHPSIRNSINLMVVKVLIVEDEYWGPMVSDNGGLTLRNFCSWQQHFNQPSDRHPEHFDTAILLTRLNFCGMRGMCDTLGVADIGTICDPSKSCSVIKDEGLQAAYTLAHELGHVLSMPHDDSNPCVRLFGPLGKHHMMTPLFVHLNKTLPWSPCSAMYLTELLDSGHGDCLLDAPTSALTLPTDLPGRRALYNLDEQCRQIFGLGFRHCPNTSPQDICAQLWCHVFGTEFLCHTKNGSLPWADGTPCGPGRLCWDGSCLPAEEVEKPKIVVDGGWAPWGPWGECSRTCGGGVQFSHRECKNPEPQNGGRYCLGRRTKYQSCRTEECPPDGKSFREQQCEKYNAYNYTDMDGNLLQWVPKYAGVSPQDRCKLFCRARGRSEFKVFEAKVIDGTLCGPETLAICVRGQCVKAGCDHVLGSPRKLDRCGVCGGEGNSCRKVSGFFNPSRYGYNDIVTIPAGATNIDVKQWSRPGVQNDGNYLALKTADGQYLLNGNLAISAIEQDILVKGTILKYSGSIATLERLQSFQPLPEPLTVQLLTVPGEVFPPRVKYTFYVPNDVNFSIQSGKERTTTNVIQPLLNVQWVLGDWSECSSSCGAGWQRRTVECLDPSGQASATCDEALKPEDAKPCGSQPCSP
SIO_010081: ADAMTS8
subclass of: SO_0000673
so part of: ADAMTS8
location: join(<3241610..3242626,3249827..3250066,3250731..3250866,3251413..3251580,3252432..3252733,3254782..3254965,3257238..3257410,3257537..3257712,3259483..3260053)
location: region:3241610-3260053:1
so has part: feature:3241610-3242626:1:exon
so has part: feature:3249827-3250066:1:exon
so has part: feature:3250731-3250866:1:exon
so has part: feature:3251413-3251580:1:exon
so has part: feature:3252432-3252733:1:exon
so has part: feature:3254782-3254965:1:exon
so has part: feature:3257238-3257410:1:exon
so has part: feature:3257537-3257712:1:exon
so has part: feature:3259483-3260053:1:exon

XP_031299171.1
type: Protein
SIO_000068: ncbiprotein

position:3260053:1
position: 3260053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3241610-3242626:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3249827-3250066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3250731-3250866:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3251413-3251580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3252432-3252733:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3254782-3254965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3257238-3257410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3257537-3257712:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3259483-3260053:1:exon

LOC116150162
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3313616..3316322)
location: region:3313616-3316322:-1
so has part: feature:3313616-3316322:-1:exon
subclass of: SO_0000011

116150162
type: Gene
SIO_000068: ncbigene

position:3313616:-1
position: 3313616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3316322:-1
position: 3316322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3313616-3316322:-1:exon

LOC116150162
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150162
product: uncharacterized LOC116150162
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XR_004133813.1
SIO_010081: LOC116150162
subclass of: SO_0000673
so part of: LOC116150162
location: complement(join(3313616..3315249,3316150..3316322))
location: region:3313616-3316322:-1
so has part: feature:3316150-3316322:-1:exon
so has part: feature:3313616-3315249:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3316150-3316322:-1:exon

position:3316150:-1
position: 3316150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3313616-3315249:-1:exon

position:3315249:-1
position: 3315249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB44
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ZBTB44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3316820..3362005
location: region:3316820-3362005:1
so has part: feature:3316820-3362005:1:exon
subclass of: SO_0000010

105094281
type: Gene
SIO_000068: ncbigene

position:3316820:1
position: 3316820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3362005:1
position: 3362005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3316820-3362005:1:exon

ZBTB44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ZBTB44
product: zinc finger and BTB domain containing 44, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_031443367.1
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3316820..3317213,3336491..3337564,3348712..3348796,3351164..3351327,3352699..3352999,3354728..3362005)
location: region:3316820-3362005:1
so has part: feature:3316820-3317213:1:exon
so has part: feature:3336491-3337564:1:exon
so has part: feature:3348712-3348796:1:exon
so has part: feature:3351164-3351327:1:exon
so has part: feature:3352699-3352999:1:exon
so has part: feature:3354728-3362005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3316820-3317213:1:exon

position:3317213:1
position: 3317213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3336491-3337564:1:exon

position:3336491:1
position: 3336491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3337564:1
position: 3337564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3348712-3348796:1:exon

position:3348712:1
position: 3348712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3348796:1
position: 3348796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3351164-3351327:1:exon

position:3351164:1
position: 3351164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3351327:1
position: 3351327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3352699-3352999:1:exon

position:3352699:1
position: 3352699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3352999:1
position: 3352999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3354728-3362005:1:exon

position:3354728:1
position: 3354728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZBTB44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ZBTB44
product: zinc finger and BTB domain containing 44, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_031443366.1
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3316960..3317213,3336491..3337564,3348712..3348826,3351164..3351327,3352699..3352999,3354728..3362005)
location: region:3316960-3362005:1
so has part: feature:3316960-3317213:1:exon
so has part: feature:3336491-3337564:1:exon
so has part: feature:3348712-3348826:1:exon
so has part: feature:3351164-3351327:1:exon
so has part: feature:3352699-3352999:1:exon
so has part: feature:3354728-3362005:1:exon

position:3316960:1
position: 3316960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3316960-3317213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3336491-3337564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3348712-3348826:1:exon

position:3348826:1
position: 3348826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3351164-3351327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3352699-3352999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3354728-3362005:1:exon

ZBTB44
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: ZBTB44
product: zinc finger and BTB domain containing 44, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004133811.1
SIO_010081: ZBTB44
so part of: ZBTB44
location: join(3316960..3317213,3336491..3337564,3348712..3348826,3351164..3351327,3352699..3352999,3354728..3356866,3359095..3362005)
location: region:3316960-3362005:1
so has part: feature:3316960-3317213:1:exon
so has part: feature:3336491-3337564:1:exon
so has part: feature:3348712-3348826:1:exon
so has part: feature:3351164-3351327:1:exon
so has part: feature:3352699-3352999:1:exon
so has part: feature:3354728-3356866:1:exon
so has part: feature:3359095-3362005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3316960-3317213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3336491-3337564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3348712-3348826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3351164-3351327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3352699-3352999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3354728-3356866:1:exon

position:3356866:1
position: 3356866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3359095-3362005:1:exon

position:3359095:1
position: 3359095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZBTB44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ZBTB44
product: zinc finger and BTB domain containing 44, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_031443368.1
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3316960..3317213,3336491..3337564,3348712..3348796,3351215..3351327,3352699..3352999,3354728..3362005)
location: region:3316960-3362005:1
so has part: feature:3316960-3317213:1:exon
so has part: feature:3336491-3337564:1:exon
so has part: feature:3348712-3348796:1:exon
so has part: feature:3351215-3351327:1:exon
so has part: feature:3352699-3352999:1:exon
so has part: feature:3354728-3362005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3316960-3317213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3336491-3337564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3348712-3348796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3351215-3351327:1:exon

position:3351215:1
position: 3351215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3352699-3352999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3354728-3362005:1:exon

ZBTB44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ZBTB44
product: zinc finger and BTB domain containing 44, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_031443369.1
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3316960..3317213,3336491..3337564,3348712..3348796,3351218..3351327,3352699..3352999,3354728..3362005)
location: region:3316960-3362005:1
so has part: feature:3316960-3317213:1:exon
so has part: feature:3336491-3337564:1:exon
so has part: feature:3348712-3348796:1:exon
so has part: feature:3351218-3351327:1:exon
so has part: feature:3352699-3352999:1:exon
so has part: feature:3354728-3362005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3316960-3317213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3336491-3337564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3348712-3348796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3351218-3351327:1:exon

position:3351218:1
position: 3351218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3352699-3352999:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3354728-3362005:1:exon

ZBTB44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ZBTB44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 44 isoform X1
translation: MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKVFRAHKVVLAACSDFFRTKLVGQAEDDNKNVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTCSEFMKSSILWNTPNSQPEKSLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRESRRKRKSYIVMSPESPVKCSTQTSSPQVLNSSAPYSENRNQPVDSSLAFPWTFPFGIDRRIQPDKVKPAENTRTLELPGPSETGRRMAEYVTCESTKTTLPLGTEEDVRVKVERLSDEEVHEEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVTEGLPTLQSTSSTNAHTEDDDRLVLKQRVVFLLENAQYPYQLYIAPPTSSTERPGPNGPDRPFQCPTCGVRFTRIQNLKQHMLIHSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRHIIRKPRIYECKTCGAMFTNSGNLIVHLRSLNHEASELANYFQSSDFLVPDYLNQEPEDTLVQYDLGEHSFESSSSVQMPVISQVSSTQNCESSFPLGSLGELAEKEEEMPDQPKTSVCAEATRDDPPKSELSSITIE
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3336547..3337564,3348712..3348826,3351164..3351327,3352699..3352999,3354728..3355010)
location: region:3336547-3355010:1
so has part: feature:3336547-3337564:1:exon
so has part: feature:3348712-3348826:1:exon
so has part: feature:3351164-3351327:1:exon
so has part: feature:3352699-3352999:1:exon
so has part: feature:3354728-3355010:1:exon

XP_031299226.1
type: Protein
SIO_000068: ncbiprotein

position:3336547:1
position: 3336547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3355010:1
position: 3355010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3336547-3337564:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3348712-3348826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3351164-3351327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3352699-3352999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3354728-3355010:1:exon

ZBTB44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ZBTB44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 44 isoform X2
translation: MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKVFRAHKVVLAACSDFFRTKLVGQAEDDNKNVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTCSEFMKSSILWNTPNSQPEKSLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRESRRKRKSYIVMSPESPVKCSTQTSSPQVLNSSAPYSENRNQPVDSSLAFPWTFPFGIDRRIQPDKVKPAENTRTLELPGPSETGRRMAEYVTCESTKTTLPLGTEEDVRVKVERLSDEEVHEEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVTEGLPTLQSTSSTNAHTEDDDRLENAQYPYQLYIAPPTSSTERPGPNGPDRPFQCPTCGVRFTRIQNLKQHMLIHSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRHIIRKPRIYECKTCGAMFTNSGNLIVHLRSLNHEASELANYFQSSDFLVPDYLNQEPEDTLVQYDLGEHSFESSSSVQMPVISQVSSTQNCESSFPLGSLGELAEKEEEMPDQPKTSVCAEATRDDPPKSELSSITIE
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3336547..3337564,3348712..3348796,3351164..3351327,3352699..3352999,3354728..3355010)
location: region:3336547-3355010:1
so has part: feature:3336547-3337564:1:exon
so has part: feature:3348712-3348796:1:exon
so has part: feature:3351164-3351327:1:exon
so has part: feature:3352699-3352999:1:exon
so has part: feature:3354728-3355010:1:exon

XP_031299227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3336547-3337564:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3348712-3348796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3351164-3351327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3352699-3352999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3354728-3355010:1:exon

ZBTB44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ZBTB44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 44 isoform X3
translation: MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKVFRAHKVVLAACSDFFRTKLVGQAEDDNKNVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTCSEFMKSSILWNTPNSQPEKSLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRESRRKRKSYIVMSPESPVKCSTQTSSPQVLNSSAPYSENRNQPVDSSLAFPWTFPFGIDRRIQPDKVKPAENTRTLELPGPSETGRRMAEYVTCESTKTTLPLGTEEDVRVKVERLSDEEVHEEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVTEGLPTLQSTSSTNAHTEDDDRSTERPGPNGPDRPFQCPTCGVRFTRIQNLKQHMLIHSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRHIIRKPRIYECKTCGAMFTNSGNLIVHLRSLNHEASELANYFQSSDFLVPDYLNQEPEDTLVQYDLGEHSFESSSSVQMPVISQVSSTQNCESSFPLGSLGELAEKEEEMPDQPKTSVCAEATRDDPPKSELSSITIE
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3336547..3337564,3348712..3348796,3351215..3351327,3352699..3352999,3354728..3355010)
location: region:3336547-3355010:1
so has part: feature:3336547-3337564:1:exon
so has part: feature:3348712-3348796:1:exon
so has part: feature:3351215-3351327:1:exon
so has part: feature:3352699-3352999:1:exon
so has part: feature:3354728-3355010:1:exon

XP_031299228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3336547-3337564:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3348712-3348796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3351215-3351327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3352699-3352999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3354728-3355010:1:exon

ZBTB44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ZBTB44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 44 isoform X4
translation: MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKVFRAHKVVLAACSDFFRTKLVGQAEDDNKNVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTCSEFMKSSILWNTPNSQPEKSLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRESRRKRKSYIVMSPESPVKCSTQTSSPQVLNSSAPYSENRNQPVDSSLAFPWTFPFGIDRRIQPDKVKPAENTRTLELPGPSETGRRMAEYVTCESTKTTLPLGTEEDVRVKVERLSDEEVHEEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVTEGLPTLQSTSSTNAHTEDDDRTERPGPNGPDRPFQCPTCGVRFTRIQNLKQHMLIHSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRHIIRKPRIYECKTCGAMFTNSGNLIVHLRSLNHEASELANYFQSSDFLVPDYLNQEPEDTLVQYDLGEHSFESSSSVQMPVISQVSSTQNCESSFPLGSLGELAEKEEEMPDQPKTSVCAEATRDDPPKSELSSITIE
SIO_010081: ZBTB44
subclass of: SO_0000673
so part of: ZBTB44
location: join(3336547..3337564,3348712..3348796,3351218..3351327,3352699..3352999,3354728..3355010)
location: region:3336547-3355010:1
so has part: feature:3336547-3337564:1:exon
so has part: feature:3348712-3348796:1:exon
so has part: feature:3351218-3351327:1:exon
so has part: feature:3352699-3352999:1:exon
so has part: feature:3354728-3355010:1:exon

XP_031299229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3336547-3337564:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3348712-3348796:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3351218-3351327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3352699-3352999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3354728-3355010:1:exon

ST14
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ST14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3373415..3405641)
location: region:3373415-3405641:-1
so has part: feature:3373415-3405641:-1:exon
subclass of: SO_0000010

105094280
type: Gene
SIO_000068: ncbigene

position:3373415:-1
position: 3373415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3405641:-1
position: 3405641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3373415-3405641:-1:exon

ST14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ST14
product: suppression of tumorigenicity 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_031443371.1
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(3373415..3374073,3374150..3374286,3374892..3375166,3378432..3378618,3379352..3379474,3379683..3379796,3379879..3379989,3380304..3380408,3381636..3381766,3381850..3381959,3382577..3382674,3382869..3383008,3383839..3384079,3384344..3384379,3384589..3384746,3385258..3385328,3385582..3385709,3385871..3386030,3405426..3405641))
location: region:3373415-3405641:-1
so has part: feature:3405426-3405641:-1:exon
so has part: feature:3385871-3386030:-1:exon
so has part: feature:3385582-3385709:-1:exon
so has part: feature:3385258-3385328:-1:exon
so has part: feature:3384589-3384746:-1:exon
so has part: feature:3384344-3384379:-1:exon
so has part: feature:3383839-3384079:-1:exon
so has part: feature:3382869-3383008:-1:exon
so has part: feature:3382577-3382674:-1:exon
so has part: feature:3381850-3381959:-1:exon
so has part: feature:3381636-3381766:-1:exon
so has part: feature:3380304-3380408:-1:exon
so has part: feature:3379879-3379989:-1:exon
so has part: feature:3379683-3379796:-1:exon
so has part: feature:3379352-3379474:-1:exon
so has part: feature:3378432-3378618:-1:exon
so has part: feature:3374892-3375166:-1:exon
so has part: feature:3374150-3374286:-1:exon
so has part: feature:3373415-3374073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3405426-3405641:-1:exon

position:3405426:-1
position: 3405426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3385871-3386030:-1:exon

position:3385871:-1
position: 3385871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3386030:-1
position: 3386030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3385582-3385709:-1:exon

position:3385582:-1
position: 3385582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3385709:-1
position: 3385709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3385258-3385328:-1:exon

position:3385258:-1
position: 3385258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3385328:-1
position: 3385328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3384589-3384746:-1:exon

position:3384589:-1
position: 3384589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3384746:-1
position: 3384746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3384344-3384379:-1:exon

position:3384344:-1
position: 3384344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3384379:-1
position: 3384379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3383839-3384079:-1:exon

position:3383839:-1
position: 3383839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3384079:-1
position: 3384079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3382869-3383008:-1:exon

position:3382869:-1
position: 3382869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3383008:-1
position: 3383008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3382577-3382674:-1:exon

position:3382577:-1
position: 3382577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3382674:-1
position: 3382674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3381850-3381959:-1:exon

position:3381850:-1
position: 3381850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3381959:-1
position: 3381959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3381636-3381766:-1:exon

position:3381636:-1
position: 3381636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3381766:-1
position: 3381766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3380304-3380408:-1:exon

position:3380304:-1
position: 3380304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3380408:-1
position: 3380408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3379879-3379989:-1:exon

position:3379879:-1
position: 3379879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3379989:-1
position: 3379989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3379683-3379796:-1:exon

position:3379683:-1
position: 3379683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3379796:-1
position: 3379796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3379352-3379474:-1:exon

position:3379352:-1
position: 3379352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3379474:-1
position: 3379474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3378432-3378618:-1:exon

position:3378432:-1
position: 3378432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3378618:-1
position: 3378618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3374892-3375166:-1:exon

position:3374892:-1
position: 3374892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3375166:-1
position: 3375166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3374150-3374286:-1:exon

position:3374150:-1
position: 3374150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3374286:-1
position: 3374286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3373415-3374073:-1:exon

position:3374073:-1
position: 3374073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ST14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ST14
product: suppression of tumorigenicity 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031443370.1
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(3373415..3374073,3374150..3374286,3374892..3375166,3378432..3378618,3379352..3379474,3379683..3379796,3379879..3379989,3380304..3380408,3381636..3381766,3381850..3381959,3382577..3382674,3382869..3383008,3383839..3384079,3384344..3384379,3384589..3384746,3385258..3385328,3385582..3385709,3385871..3386030,3401878..3402008))
location: region:3373415-3402008:-1
so has part: feature:3401878-3402008:-1:exon
so has part: feature:3385871-3386030:-1:exon
so has part: feature:3385582-3385709:-1:exon
so has part: feature:3385258-3385328:-1:exon
so has part: feature:3384589-3384746:-1:exon
so has part: feature:3384344-3384379:-1:exon
so has part: feature:3383839-3384079:-1:exon
so has part: feature:3382869-3383008:-1:exon
so has part: feature:3382577-3382674:-1:exon
so has part: feature:3381850-3381959:-1:exon
so has part: feature:3381636-3381766:-1:exon
so has part: feature:3380304-3380408:-1:exon
so has part: feature:3379879-3379989:-1:exon
so has part: feature:3379683-3379796:-1:exon
so has part: feature:3379352-3379474:-1:exon
so has part: feature:3378432-3378618:-1:exon
so has part: feature:3374892-3375166:-1:exon
so has part: feature:3374150-3374286:-1:exon
so has part: feature:3373415-3374073:-1:exon

position:3402008:-1
position: 3402008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3401878-3402008:-1:exon

position:3401878:-1
position: 3401878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3385871-3386030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3385582-3385709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385258-3385328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3384589-3384746:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3384344-3384379:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3383839-3384079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3382869-3383008:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3382577-3382674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3381850-3381959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3381636-3381766:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3380304-3380408:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3379879-3379989:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3379683-3379796:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3379352-3379474:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3378432-3378618:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3374892-3375166:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3374150-3374286:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3373415-3374073:-1:exon

ST14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ST14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 14 protein isoform X1
translation: MREGSTSLTAAQNMNGFEEGVEFLPANNTRMVEKGGPRHGVVLAAVLAGVLVLSLMTGLLVWHFQYQNVRVQKVFNGYLRISNENFLDAYENPNSTEFANLAKKVKEALKLLYSGIPVLGPYHKKSAVTAFSEGSVIAYYWAEFSVPKNLVEEVERAMAEERVVTLPPRARTLSSFVLTSVVAFPTDPRTVQNAQDNSCSFALHARGSEPIRFSTPGFPNSPYPSHARCQWTLRGDADSALSLTFHSFDVSTCDEHGSDLVTVYDTLSPVEPRAVVQLCGTYPPSYNLTFLSSQNVLLVTLVTSTERRHPGFEAVFFQLPRMSSCGGYLRGAQGTFSSPYYPGHYPPNVNCTWHIEVPNNQNVKVRFKAFYLLEPSVPLGSCSKDYVEINGERFCGERSQFVVSSRSSKITVHFHSDQSYTDTGFLAEYLSYDSSDPCPGKFMCNTGRCVAKELRCDGWADCTDYSDERDCKCNATHQFTCGDSFCKPLFWVCDSVNDCEDGSDEKGCSCPADTFKCGNGKCLLQSQRCDGKNDCGDGSDEATCDRVSTITCTKQTYRCLNGLCISKGNPECDGKKDCTDGSDEKNCDCGLRSFTRQSRVVGGENADEGEWPWQVSLHALGQGHVCGASLISPDWMVSAAHCFVDYRGFRYSDHSMWTAYLGLHDQSQRSAPGVQELRLQRIISHPYFNDFTFDYDIALLQLERPVEYSPTVRPICLPDATHAFPAGKAIWVTGWGHTQEGGTGALILQKGEIRVINQTTCERLLPHQITARMMCVGYLSGGVDACQGDSGGPLSSAEANGRMFQAGVVSWGDGCAQRNKPGVYTRLPVFRDWIKEQTGV
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(3373912..3374073,3374150..3374286,3374892..3375166,3378432..3378618,3379352..3379474,3379683..3379796,3379879..3379989,3380304..3380408,3381636..3381766,3381850..3381959,3382577..3382674,3382869..3383008,3383839..3384079,3384344..3384379,3384589..3384746,3385258..3385328,3385582..3385709,3385871..3386030,3401878..3401913))
location: region:3373912-3401913:-1
so has part: feature:3401878-3401913:-1:exon
so has part: feature:3385871-3386030:-1:exon
so has part: feature:3385582-3385709:-1:exon
so has part: feature:3385258-3385328:-1:exon
so has part: feature:3384589-3384746:-1:exon
so has part: feature:3384344-3384379:-1:exon
so has part: feature:3383839-3384079:-1:exon
so has part: feature:3382869-3383008:-1:exon
so has part: feature:3382577-3382674:-1:exon
so has part: feature:3381850-3381959:-1:exon
so has part: feature:3381636-3381766:-1:exon
so has part: feature:3380304-3380408:-1:exon
so has part: feature:3379879-3379989:-1:exon
so has part: feature:3379683-3379796:-1:exon
so has part: feature:3379352-3379474:-1:exon
so has part: feature:3378432-3378618:-1:exon
so has part: feature:3374892-3375166:-1:exon
so has part: feature:3374150-3374286:-1:exon
so has part: feature:3373912-3374073:-1:exon

XP_031299230.1
type: Protein
SIO_000068: ncbiprotein

position:3373912:-1
position: 3373912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3401913:-1
position: 3401913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3401878-3401913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3385871-3386030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3385582-3385709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385258-3385328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3384589-3384746:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3384344-3384379:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3383839-3384079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3382869-3383008:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3382577-3382674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3381850-3381959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3381636-3381766:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3380304-3380408:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3379879-3379989:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3379683-3379796:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3379352-3379474:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3378432-3378618:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3374892-3375166:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3374150-3374286:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3373912-3374073:-1:exon

ST14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ST14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 14 protein isoform X2
translation: MNGFEEGVEFLPANNTRMVEKGGPRHGVVLAAVLAGVLVLSLMTGLLVWHFQYQNVRVQKVFNGYLRISNENFLDAYENPNSTEFANLAKKVKEALKLLYSGIPVLGPYHKKSAVTAFSEGSVIAYYWAEFSVPKNLVEEVERAMAEERVVTLPPRARTLSSFVLTSVVAFPTDPRTVQNAQDNSCSFALHARGSEPIRFSTPGFPNSPYPSHARCQWTLRGDADSALSLTFHSFDVSTCDEHGSDLVTVYDTLSPVEPRAVVQLCGTYPPSYNLTFLSSQNVLLVTLVTSTERRHPGFEAVFFQLPRMSSCGGYLRGAQGTFSSPYYPGHYPPNVNCTWHIEVPNNQNVKVRFKAFYLLEPSVPLGSCSKDYVEINGERFCGERSQFVVSSRSSKITVHFHSDQSYTDTGFLAEYLSYDSSDPCPGKFMCNTGRCVAKELRCDGWADCTDYSDERDCKCNATHQFTCGDSFCKPLFWVCDSVNDCEDGSDEKGCSCPADTFKCGNGKCLLQSQRCDGKNDCGDGSDEATCDRVSTITCTKQTYRCLNGLCISKGNPECDGKKDCTDGSDEKNCDCGLRSFTRQSRVVGGENADEGEWPWQVSLHALGQGHVCGASLISPDWMVSAAHCFVDYRGFRYSDHSMWTAYLGLHDQSQRSAPGVQELRLQRIISHPYFNDFTFDYDIALLQLERPVEYSPTVRPICLPDATHAFPAGKAIWVTGWGHTQEGGTGALILQKGEIRVINQTTCERLLPHQITARMMCVGYLSGGVDACQGDSGGPLSSAEANGRMFQAGVVSWGDGCAQRNKPGVYTRLPVFRDWIKEQTGV
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(3373912..3374073,3374150..3374286,3374892..3375166,3378432..3378618,3379352..3379474,3379683..3379796,3379879..3379989,3380304..3380408,3381636..3381766,3381850..3381959,3382577..3382674,3382869..3383008,3383839..3384079,3384344..3384379,3384589..3384746,3385258..3385328,3385582..3385709,3385871..3386027))
location: region:3373912-3386027:-1
so has part: feature:3385871-3386027:-1:exon
so has part: feature:3385582-3385709:-1:exon
so has part: feature:3385258-3385328:-1:exon
so has part: feature:3384589-3384746:-1:exon
so has part: feature:3384344-3384379:-1:exon
so has part: feature:3383839-3384079:-1:exon
so has part: feature:3382869-3383008:-1:exon
so has part: feature:3382577-3382674:-1:exon
so has part: feature:3381850-3381959:-1:exon
so has part: feature:3381636-3381766:-1:exon
so has part: feature:3380304-3380408:-1:exon
so has part: feature:3379879-3379989:-1:exon
so has part: feature:3379683-3379796:-1:exon
so has part: feature:3379352-3379474:-1:exon
so has part: feature:3378432-3378618:-1:exon
so has part: feature:3374892-3375166:-1:exon
so has part: feature:3374150-3374286:-1:exon
so has part: feature:3373912-3374073:-1:exon

XP_031299231.1
type: Protein
SIO_000068: ncbiprotein

position:3386027:-1
position: 3386027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3385871-3386027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3385582-3385709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3385258-3385328:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3384589-3384746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3384344-3384379:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3383839-3384079:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3382869-3383008:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3382577-3382674:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3381850-3381959:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3381636-3381766:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3380304-3380408:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3379879-3379989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3379683-3379796:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3379352-3379474:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3378432-3378618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3374892-3375166:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3374150-3374286:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3373912-3374073:-1:exon

APLP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3417821..3476256)
location: region:3417821-3476256:-1
so has part: feature:3417821-3476256:-1:exon
subclass of: SO_0000010

105094279
type: Gene
SIO_000068: ncbigene

position:3417821:-1
position: 3417821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3476256:-1
position: 3476256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3417821-3476256:-1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_031443374.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3417821..3419264,3420360..3420515,3420813..3420887,3421572..3421657,3424340..3424375,3425875..3426027,3427413..3427512,3430252..3430380,3431193..3431351,3432557..3432631,3433322..3433452,3437723..3437943,3438295..3438488,3439259..3439371,3446352..3446475,3447290..3447463,3476037..3476256))
location: region:3417821-3476256:-1
so has part: feature:3476037-3476256:-1:exon
so has part: feature:3447290-3447463:-1:exon
so has part: feature:3446352-3446475:-1:exon
so has part: feature:3439259-3439371:-1:exon
so has part: feature:3438295-3438488:-1:exon
so has part: feature:3437723-3437943:-1:exon
so has part: feature:3433322-3433452:-1:exon
so has part: feature:3432557-3432631:-1:exon
so has part: feature:3431193-3431351:-1:exon
so has part: feature:3430252-3430380:-1:exon
so has part: feature:3427413-3427512:-1:exon
so has part: feature:3425875-3426027:-1:exon
so has part: feature:3424340-3424375:-1:exon
so has part: feature:3421572-3421657:-1:exon
so has part: feature:3420813-3420887:-1:exon
so has part: feature:3420360-3420515:-1:exon
so has part: feature:3417821-3419264:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3476037-3476256:-1:exon

position:3476037:-1
position: 3476037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3447290-3447463:-1:exon

position:3447290:-1
position: 3447290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3447463:-1
position: 3447463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3446352-3446475:-1:exon

position:3446352:-1
position: 3446352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3446475:-1
position: 3446475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3439259-3439371:-1:exon

position:3439259:-1
position: 3439259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3439371:-1
position: 3439371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3438295-3438488:-1:exon

position:3438295:-1
position: 3438295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3438488:-1
position: 3438488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3437723-3437943:-1:exon

position:3437723:-1
position: 3437723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3437943:-1
position: 3437943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3433322-3433452:-1:exon

position:3433322:-1
position: 3433322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3433452:-1
position: 3433452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3432557-3432631:-1:exon

position:3432557:-1
position: 3432557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3432631:-1
position: 3432631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3431193-3431351:-1:exon

position:3431193:-1
position: 3431193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3431351:-1
position: 3431351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3430252-3430380:-1:exon

position:3430252:-1
position: 3430252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3430380:-1
position: 3430380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3427413-3427512:-1:exon

position:3427413:-1
position: 3427413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3427512:-1
position: 3427512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3425875-3426027:-1:exon

position:3425875:-1
position: 3425875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3426027:-1
position: 3426027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3424340-3424375:-1:exon

position:3424340:-1
position: 3424340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3424375:-1
position: 3424375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3421572-3421657:-1:exon

position:3421572:-1
position: 3421572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3421657:-1
position: 3421657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3420813-3420887:-1:exon

position:3420813:-1
position: 3420813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3420887:-1
position: 3420887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3420360-3420515:-1:exon

position:3420360:-1
position: 3420360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3420515:-1
position: 3420515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3417821-3419264:-1:exon

position:3419264:-1
position: 3419264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_031443375.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3417821..3419264,3420360..3420515,3420813..3420887,3421572..3421657,3425875..3426027,3427413..3427512,3430252..3430380,3431193..3431351,3432557..3432631,3433322..3433452,3437723..3437943,3438295..3438488,3439259..3439371,3446352..3446475,3447290..3447463,3476037..3476255))
location: region:3417821-3476255:-1
so has part: feature:3476037-3476255:-1:exon
so has part: feature:3447290-3447463:-1:exon
so has part: feature:3446352-3446475:-1:exon
so has part: feature:3439259-3439371:-1:exon
so has part: feature:3438295-3438488:-1:exon
so has part: feature:3437723-3437943:-1:exon
so has part: feature:3433322-3433452:-1:exon
so has part: feature:3432557-3432631:-1:exon
so has part: feature:3431193-3431351:-1:exon
so has part: feature:3430252-3430380:-1:exon
so has part: feature:3427413-3427512:-1:exon
so has part: feature:3425875-3426027:-1:exon
so has part: feature:3421572-3421657:-1:exon
so has part: feature:3420813-3420887:-1:exon
so has part: feature:3420360-3420515:-1:exon
so has part: feature:3417821-3419264:-1:exon

position:3476255:-1
position: 3476255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3476037-3476255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3447290-3447463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3446352-3446475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3439259-3439371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3438295-3438488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3437723-3437943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3433322-3433452:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3432557-3432631:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3431193-3431351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3430252-3430380:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3427413-3427512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3425875-3426027:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3421572-3421657:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3420813-3420887:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3420360-3420515:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3417821-3419264:-1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_031443373.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3417821..3419264,3420360..3420515,3420813..3420887,3421572..3421657,3425875..3426027,3427413..3427512,3430252..3430380,3431193..3431351,3432557..3432631,3433322..3433452,3436465..3436632,3437723..3437943,3438295..3438488,3439259..3439371,3446352..3446475,3447290..3447463,3476037..3476255))
location: region:3417821-3476255:-1
so has part: feature:3476037-3476255:-1:exon
so has part: feature:3447290-3447463:-1:exon
so has part: feature:3446352-3446475:-1:exon
so has part: feature:3439259-3439371:-1:exon
so has part: feature:3438295-3438488:-1:exon
so has part: feature:3437723-3437943:-1:exon
so has part: feature:3436465-3436632:-1:exon
so has part: feature:3433322-3433452:-1:exon
so has part: feature:3432557-3432631:-1:exon
so has part: feature:3431193-3431351:-1:exon
so has part: feature:3430252-3430380:-1:exon
so has part: feature:3427413-3427512:-1:exon
so has part: feature:3425875-3426027:-1:exon
so has part: feature:3421572-3421657:-1:exon
so has part: feature:3420813-3420887:-1:exon
so has part: feature:3420360-3420515:-1:exon
so has part: feature:3417821-3419264:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3476037-3476255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3447290-3447463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3446352-3446475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3439259-3439371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3438295-3438488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3437723-3437943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3436465-3436632:-1:exon

position:3436465:-1
position: 3436465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3436632:-1
position: 3436632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3433322-3433452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3432557-3432631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3431193-3431351:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3430252-3430380:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3427413-3427512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3425875-3426027:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3421572-3421657:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3420813-3420887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3420360-3420515:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3417821-3419264:-1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_031443372.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3417821..3419264,3420360..3420515,3420813..3420887,3421572..3421657,3424340..3424375,3425875..3426027,3427413..3427512,3430252..3430380,3431193..3431351,3432557..3432631,3433322..3433452,3436465..3436632,3437723..3437943,3438295..3438488,3439259..3439371,3446352..3446475,3447290..3447463,3476037..3476255))
location: region:3417821-3476255:-1
so has part: feature:3476037-3476255:-1:exon
so has part: feature:3447290-3447463:-1:exon
so has part: feature:3446352-3446475:-1:exon
so has part: feature:3439259-3439371:-1:exon
so has part: feature:3438295-3438488:-1:exon
so has part: feature:3437723-3437943:-1:exon
so has part: feature:3436465-3436632:-1:exon
so has part: feature:3433322-3433452:-1:exon
so has part: feature:3432557-3432631:-1:exon
so has part: feature:3431193-3431351:-1:exon
so has part: feature:3430252-3430380:-1:exon
so has part: feature:3427413-3427512:-1:exon
so has part: feature:3425875-3426027:-1:exon
so has part: feature:3424340-3424375:-1:exon
so has part: feature:3421572-3421657:-1:exon
so has part: feature:3420813-3420887:-1:exon
so has part: feature:3420360-3420515:-1:exon
so has part: feature:3417821-3419264:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3476037-3476255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3447290-3447463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3446352-3446475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3439259-3439371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3438295-3438488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3437723-3437943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3436465-3436632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3433322-3433452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3432557-3432631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3431193-3431351:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3430252-3430380:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3427413-3427512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3425875-3426027:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3424340-3424375:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3421572-3421657:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3420813-3420887:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3420360-3420515:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3417821-3419264:-1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X4
translation: MAATGTRAAGHGQTLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEPQVAMFCGKLNMHVNIQTGRWEPDPTGTKSCFGTKEEVLQYCQEMYPELQITNVMEANQPVSVDNWCRRDKKQCQSHIVIPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVVKEACLTQGLTLYSYGMLLPCGVDQFHGTEYVCCPQTKVMETAVSKEEEEEEDDDEEEEEEDYDIYKSEFPTEADLEDFTEAAVDEEDEDEDEDEEEGEEVVEDRDYYYDTFKGDDYAEEGPTEPGSDRTVSEKEIAHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRVALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDVRVSSEESDEIPPFHPLHPFPSLPENEGSALGEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEEEPESLGPLREDFGLSSSALIGLLVIAVAIATVIVVSLVMLRKRQYGSISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3419163..3419264,3420360..3420515,3420813..3420887,3421572..3421657,3425875..3426027,3427413..3427512,3430252..3430380,3431193..3431351,3432557..3432631,3433322..3433452,3437723..3437943,3438295..3438488,3439259..3439371,3446352..3446475,3447290..3447463,3476037..3476138))
location: region:3419163-3476138:-1
so has part: feature:3476037-3476138:-1:exon
so has part: feature:3447290-3447463:-1:exon
so has part: feature:3446352-3446475:-1:exon
so has part: feature:3439259-3439371:-1:exon
so has part: feature:3438295-3438488:-1:exon
so has part: feature:3437723-3437943:-1:exon
so has part: feature:3433322-3433452:-1:exon
so has part: feature:3432557-3432631:-1:exon
so has part: feature:3431193-3431351:-1:exon
so has part: feature:3430252-3430380:-1:exon
so has part: feature:3427413-3427512:-1:exon
so has part: feature:3425875-3426027:-1:exon
so has part: feature:3421572-3421657:-1:exon
so has part: feature:3420813-3420887:-1:exon
so has part: feature:3420360-3420515:-1:exon
so has part: feature:3419163-3419264:-1:exon

XP_031299235.1
type: Protein
SIO_000068: ncbiprotein

position:3419163:-1
position: 3419163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3476138:-1
position: 3476138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3476037-3476138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3447290-3447463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3446352-3446475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3439259-3439371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3438295-3438488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3437723-3437943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3433322-3433452:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3432557-3432631:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3431193-3431351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3430252-3430380:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3427413-3427512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3425875-3426027:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3421572-3421657:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3420813-3420887:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3420360-3420515:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3419163-3419264:-1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X3
translation: MAATGTRAAGHGQTLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEPQVAMFCGKLNMHVNIQTGRWEPDPTGTKSCFGTKEEVLQYCQEMYPELQITNVMEANQPVSVDNWCRRDKKQCQSHIVIPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVVKEACLTQGLTLYSYGMLLPCGVDQFHGTEYVCCPQTKVMETAVSKEEEEEEDDDEEEEEEDYDIYKSEFPTEADLEDFTEAAVDEEDEDEDEDEEEGEEVVEDRDYYYDTFKGDDYAEEGPTEPGSDRTVSEKEIAHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRVALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDVRVSSEESDEIPPFHPLHPFPSLPENEDTQPELFHPMKKGSALGEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEEEPESLGPLREDFGLSSSALIGLLVIAVAIATVIVVSLVMLRKRQYGSISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3419163..3419264,3420360..3420515,3420813..3420887,3421572..3421657,3424340..3424375,3425875..3426027,3427413..3427512,3430252..3430380,3431193..3431351,3432557..3432631,3433322..3433452,3437723..3437943,3438295..3438488,3439259..3439371,3446352..3446475,3447290..3447463,3476037..3476138))
location: region:3419163-3476138:-1
so has part: feature:3476037-3476138:-1:exon
so has part: feature:3447290-3447463:-1:exon
so has part: feature:3446352-3446475:-1:exon
so has part: feature:3439259-3439371:-1:exon
so has part: feature:3438295-3438488:-1:exon
so has part: feature:3437723-3437943:-1:exon
so has part: feature:3433322-3433452:-1:exon
so has part: feature:3432557-3432631:-1:exon
so has part: feature:3431193-3431351:-1:exon
so has part: feature:3430252-3430380:-1:exon
so has part: feature:3427413-3427512:-1:exon
so has part: feature:3425875-3426027:-1:exon
so has part: feature:3424340-3424375:-1:exon
so has part: feature:3421572-3421657:-1:exon
so has part: feature:3420813-3420887:-1:exon
so has part: feature:3420360-3420515:-1:exon
so has part: feature:3419163-3419264:-1:exon

XP_031299234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3476037-3476138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3447290-3447463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3446352-3446475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3439259-3439371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3438295-3438488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3437723-3437943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3433322-3433452:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3432557-3432631:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3431193-3431351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3430252-3430380:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3427413-3427512:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3425875-3426027:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3424340-3424375:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3421572-3421657:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3420813-3420887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3420360-3420515:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3419163-3419264:-1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X2
translation: MAATGTRAAGHGQTLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEPQVAMFCGKLNMHVNIQTGRWEPDPTGTKSCFGTKEEVLQYCQEMYPELQITNVMEANQPVSVDNWCRRDKKQCQSHIVIPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVVKEACLTQGLTLYSYGMLLPCGVDQFHGTEYVCCPQTKVMETAVSKEEEEEEDDDEEEEEEDYDIYKSEFPTEADLEDFTEAAVDEEDEDEDEDEEEGEEVVEDRDYYYDTFKGDDYAEEGPTEPGSDRTVSEKEIAHDVKAVCSQEALTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRVALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDVRVSSEESDEIPPFHPLHPFPSLPENEGSALGEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEEEPESLGPLREDFGLSSSALIGLLVIAVAIATVIVVSLVMLRKRQYGSISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3419163..3419264,3420360..3420515,3420813..3420887,3421572..3421657,3425875..3426027,3427413..3427512,3430252..3430380,3431193..3431351,3432557..3432631,3433322..3433452,3436465..3436632,3437723..3437943,3438295..3438488,3439259..3439371,3446352..3446475,3447290..3447463,3476037..3476138))
location: region:3419163-3476138:-1
so has part: feature:3476037-3476138:-1:exon
so has part: feature:3447290-3447463:-1:exon
so has part: feature:3446352-3446475:-1:exon
so has part: feature:3439259-3439371:-1:exon
so has part: feature:3438295-3438488:-1:exon
so has part: feature:3437723-3437943:-1:exon
so has part: feature:3436465-3436632:-1:exon
so has part: feature:3433322-3433452:-1:exon
so has part: feature:3432557-3432631:-1:exon
so has part: feature:3431193-3431351:-1:exon
so has part: feature:3430252-3430380:-1:exon
so has part: feature:3427413-3427512:-1:exon
so has part: feature:3425875-3426027:-1:exon
so has part: feature:3421572-3421657:-1:exon
so has part: feature:3420813-3420887:-1:exon
so has part: feature:3420360-3420515:-1:exon
so has part: feature:3419163-3419264:-1:exon

XP_031299233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3476037-3476138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3447290-3447463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3446352-3446475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3439259-3439371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3438295-3438488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3437723-3437943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3436465-3436632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3433322-3433452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3432557-3432631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3431193-3431351:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3430252-3430380:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3427413-3427512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3425875-3426027:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3421572-3421657:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3420813-3420887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3420360-3420515:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3419163-3419264:-1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X1
translation: MAATGTRAAGHGQTLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEPQVAMFCGKLNMHVNIQTGRWEPDPTGTKSCFGTKEEVLQYCQEMYPELQITNVMEANQPVSVDNWCRRDKKQCQSHIVIPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVVKEACLTQGLTLYSYGMLLPCGVDQFHGTEYVCCPQTKVMETAVSKEEEEEEDDDEEEEEEDYDIYKSEFPTEADLEDFTEAAVDEEDEDEDEDEEEGEEVVEDRDYYYDTFKGDDYAEEGPTEPGSDRTVSEKEIAHDVKAVCSQEALTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRVALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDVRVSSEESDEIPPFHPLHPFPSLPENEDTQPELFHPMKKGSALGEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEEEPESLGPLREDFGLSSSALIGLLVIAVAIATVIVVSLVMLRKRQYGSISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(3419163..3419264,3420360..3420515,3420813..3420887,3421572..3421657,3424340..3424375,3425875..3426027,3427413..3427512,3430252..3430380,3431193..3431351,3432557..3432631,3433322..3433452,3436465..3436632,3437723..3437943,3438295..3438488,3439259..3439371,3446352..3446475,3447290..3447463,3476037..3476138))
location: region:3419163-3476138:-1
so has part: feature:3476037-3476138:-1:exon
so has part: feature:3447290-3447463:-1:exon
so has part: feature:3446352-3446475:-1:exon
so has part: feature:3439259-3439371:-1:exon
so has part: feature:3438295-3438488:-1:exon
so has part: feature:3437723-3437943:-1:exon
so has part: feature:3436465-3436632:-1:exon
so has part: feature:3433322-3433452:-1:exon
so has part: feature:3432557-3432631:-1:exon
so has part: feature:3431193-3431351:-1:exon
so has part: feature:3430252-3430380:-1:exon
so has part: feature:3427413-3427512:-1:exon
so has part: feature:3425875-3426027:-1:exon
so has part: feature:3424340-3424375:-1:exon
so has part: feature:3421572-3421657:-1:exon
so has part: feature:3420813-3420887:-1:exon
so has part: feature:3420360-3420515:-1:exon
so has part: feature:3419163-3419264:-1:exon

XP_031299232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3476037-3476138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3447290-3447463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3446352-3446475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3439259-3439371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3438295-3438488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3437723-3437943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3436465-3436632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3433322-3433452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3432557-3432631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3431193-3431351:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3430252-3430380:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3427413-3427512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3425875-3426027:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3424340-3424375:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3421572-3421657:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3420813-3420887:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3420360-3420515:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3419163-3419264:-1:exon

LOC116150163
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150163
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3501657..3512368)
location: region:3501657-3512368:-1
so has part: feature:3501657-3512368:-1:exon
subclass of: SO_0000011

116150163
type: Gene
SIO_000068: ncbigene

position:3501657:-1
position: 3501657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3512368:-1
position: 3512368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3501657-3512368:-1:exon

LOC116150163
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150163
product: uncharacterized LOC116150163, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_004133817.1
SIO_010081: LOC116150163
subclass of: SO_0000673
so part of: LOC116150163
location: complement(join(3501657..3503170,3511122..3512368))
location: region:3501657-3512368:-1
so has part: feature:3511122-3512368:-1:exon
so has part: feature:3501657-3503170:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3511122-3512368:-1:exon

position:3511122:-1
position: 3511122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3501657-3503170:-1:exon

position:3503170:-1
position: 3503170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116150163
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150163
product: uncharacterized LOC116150163, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004133816.1
SIO_010081: LOC116150163
subclass of: SO_0000673
so part of: LOC116150163
location: complement(join(3501657..3503170,3509474..3509829))
location: region:3501657-3509829:-1
so has part: feature:3509474-3509829:-1:exon
so has part: feature:3501657-3503170:-1:exon

position:3509829:-1
position: 3509829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3509474-3509829:-1:exon

position:3509474:-1
position: 3509474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3501657-3503170:-1:exon

PRDM10
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3509857..3584196
location: region:3509857-3584196:1
so has part: feature:3509857-3584196:1:exon
subclass of: SO_0000010

105094292
type: Gene
SIO_000068: ncbigene

position:3509857:1
position: 3509857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3584196:1
position: 3584196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3509857-3584196:1:exon

PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PRDM10
product: PR/SET domain 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031443376.1
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(3509857..3509969,3515273..3515346,3531600..3531784,3534160..3534324,3536001..3536060,3543480..3543705,3545506..3545747,3547112..3547315,3550613..3550685,3552891..3553008,3555626..3555755,3556497..3556739,3561770..3562117,3563559..3563714,3568187..3568366,3569273..3569383,3570383..3570583,3571209..3571352,3572032..3572202,3573441..3573581,3575888..3576044,3579054..3579157,3581222..3584196)
location: region:3509857-3584196:1
so has part: feature:3509857-3509969:1:exon
so has part: feature:3515273-3515346:1:exon
so has part: feature:3531600-3531784:1:exon
so has part: feature:3534160-3534324:1:exon
so has part: feature:3536001-3536060:1:exon
so has part: feature:3543480-3543705:1:exon
so has part: feature:3545506-3545747:1:exon
so has part: feature:3547112-3547315:1:exon
so has part: feature:3550613-3550685:1:exon
so has part: feature:3552891-3553008:1:exon
so has part: feature:3555626-3555755:1:exon
so has part: feature:3556497-3556739:1:exon
so has part: feature:3561770-3562117:1:exon
so has part: feature:3563559-3563714:1:exon
so has part: feature:3568187-3568366:1:exon
so has part: feature:3569273-3569383:1:exon
so has part: feature:3570383-3570583:1:exon
so has part: feature:3571209-3571352:1:exon
so has part: feature:3572032-3572202:1:exon
so has part: feature:3573441-3573581:1:exon
so has part: feature:3575888-3576044:1:exon
so has part: feature:3579054-3579157:1:exon
so has part: feature:3581222-3584196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3509857-3509969:1:exon

position:3509969:1
position: 3509969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3515273-3515346:1:exon

position:3515273:1
position: 3515273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3515346:1
position: 3515346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3531600-3531784:1:exon

position:3531600:1
position: 3531600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3531784:1
position: 3531784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3534160-3534324:1:exon

position:3534160:1
position: 3534160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3534324:1
position: 3534324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3536001-3536060:1:exon

position:3536001:1
position: 3536001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3536060:1
position: 3536060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3543480-3543705:1:exon

position:3543480:1
position: 3543480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3543705:1
position: 3543705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3545506-3545747:1:exon

position:3545506:1
position: 3545506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3545747:1
position: 3545747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3547112-3547315:1:exon

position:3547112:1
position: 3547112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3547315:1
position: 3547315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3550613-3550685:1:exon

position:3550613:1
position: 3550613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3550685:1
position: 3550685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3552891-3553008:1:exon

position:3552891:1
position: 3552891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3553008:1
position: 3553008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3555626-3555755:1:exon

position:3555626:1
position: 3555626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3555755:1
position: 3555755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3556497-3556739:1:exon

position:3556497:1
position: 3556497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3556739:1
position: 3556739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3561770-3562117:1:exon

position:3561770:1
position: 3561770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3562117:1
position: 3562117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3563559-3563714:1:exon

position:3563559:1
position: 3563559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3563714:1
position: 3563714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3568187-3568366:1:exon

position:3568187:1
position: 3568187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3568366:1
position: 3568366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3569273-3569383:1:exon

position:3569273:1
position: 3569273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3569383:1
position: 3569383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3570383-3570583:1:exon

position:3570383:1
position: 3570383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3570583:1
position: 3570583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3571209-3571352:1:exon

position:3571209:1
position: 3571209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3571352:1
position: 3571352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3572032-3572202:1:exon

position:3572032:1
position: 3572032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3572202:1
position: 3572202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3573441-3573581:1:exon

position:3573441:1
position: 3573441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3573581:1
position: 3573581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3575888-3576044:1:exon

position:3575888:1
position: 3575888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3576044:1
position: 3576044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3579054-3579157:1:exon

position:3579054:1
position: 3579054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3579157:1
position: 3579157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3581222-3584196:1:exon

position:3581222:1
position: 3581222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PRDM10
product: PR/SET domain 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031443378.1
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(3509857..3509969,3515273..3515346,3531600..3531784,3534160..3534324,3536001..3536060,3543480..3543705,3545506..3545747,3547112..3547315,3550613..3550685,3552891..3553008,3555626..3555755,3556521..3556739,3561770..3562117,3563559..3563714,3568187..3568366,3569273..3569383,3570383..3570583,3571209..3571352,3572032..3572202,3573441..3573581,3575888..3576044,3579054..3579157,3581222..3584196)
location: region:3509857-3584196:1
so has part: feature:3509857-3509969:1:exon
so has part: feature:3515273-3515346:1:exon
so has part: feature:3531600-3531784:1:exon
so has part: feature:3534160-3534324:1:exon
so has part: feature:3536001-3536060:1:exon
so has part: feature:3543480-3543705:1:exon
so has part: feature:3545506-3545747:1:exon
so has part: feature:3547112-3547315:1:exon
so has part: feature:3550613-3550685:1:exon
so has part: feature:3552891-3553008:1:exon
so has part: feature:3555626-3555755:1:exon
so has part: feature:3556521-3556739:1:exon
so has part: feature:3561770-3562117:1:exon
so has part: feature:3563559-3563714:1:exon
so has part: feature:3568187-3568366:1:exon
so has part: feature:3569273-3569383:1:exon
so has part: feature:3570383-3570583:1:exon
so has part: feature:3571209-3571352:1:exon
so has part: feature:3572032-3572202:1:exon
so has part: feature:3573441-3573581:1:exon
so has part: feature:3575888-3576044:1:exon
so has part: feature:3579054-3579157:1:exon
so has part: feature:3581222-3584196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3509857-3509969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3515273-3515346:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3531600-3531784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3534160-3534324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3536001-3536060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3543480-3543705:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3545506-3545747:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3547112-3547315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3550613-3550685:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3552891-3553008:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3555626-3555755:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3556521-3556739:1:exon

position:3556521:1
position: 3556521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3561770-3562117:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3563559-3563714:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3568187-3568366:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3569273-3569383:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3570383-3570583:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3571209-3571352:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3572032-3572202:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3573441-3573581:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3575888-3576044:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3579054-3579157:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3581222-3584196:1:exon

PRDM10
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: PRDM10
product: PR/SET domain 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004133815.1
SIO_010081: PRDM10
so part of: PRDM10
location: join(3509857..3509969,3515273..3515346,3531600..3531784,3534160..3534324,3536001..3536060,3543480..3543705,3545506..3545747,3547112..3547315,3550613..3550685,3552891..3553008,3555626..3555755,3556497..3556739,3561770..3562117,3563559..3563714,3568187..3568366,3569273..3569383,3570383..3570583,3571209..3571352,3572032..3572334,3573441..3573574)
location: region:3509857-3573574:1
so has part: feature:3509857-3509969:1:exon
so has part: feature:3515273-3515346:1:exon
so has part: feature:3531600-3531784:1:exon
so has part: feature:3534160-3534324:1:exon
so has part: feature:3536001-3536060:1:exon
so has part: feature:3543480-3543705:1:exon
so has part: feature:3545506-3545747:1:exon
so has part: feature:3547112-3547315:1:exon
so has part: feature:3550613-3550685:1:exon
so has part: feature:3552891-3553008:1:exon
so has part: feature:3555626-3555755:1:exon
so has part: feature:3556497-3556739:1:exon
so has part: feature:3561770-3562117:1:exon
so has part: feature:3563559-3563714:1:exon
so has part: feature:3568187-3568366:1:exon
so has part: feature:3569273-3569383:1:exon
so has part: feature:3570383-3570583:1:exon
so has part: feature:3571209-3571352:1:exon
so has part: feature:3572032-3572334:1:exon
so has part: feature:3573441-3573574:1:exon

position:3573574:1
position: 3573574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3509857-3509969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3515273-3515346:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3531600-3531784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3534160-3534324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3536001-3536060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3543480-3543705:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3545506-3545747:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3547112-3547315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3550613-3550685:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3552891-3553008:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3555626-3555755:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3556497-3556739:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3561770-3562117:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3563559-3563714:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3568187-3568366:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3569273-3569383:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3570383-3570583:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3571209-3571352:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3572032-3572334:1:exon

position:3572334:1
position: 3572334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3573441-3573574:1:exon

LOC116150262
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150262
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3513971..3514077)
location: region:3513971-3514077:-1
so has part: feature:3513971-3514077:-1:exon
subclass of: SO_0000623

116150262
type: Gene
SIO_000068: ncbigene

position:3513971:-1
position: 3513971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3514077:-1
position: 3514077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3513971-3514077:-1:exon

LOC116150262
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snRNA
gene: LOC116150262
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004133978.1
SIO_010081: LOC116150262
subclass of: SO_0000673
so part of: LOC116150262
location: complement(3513971..3514077)
location: region:3513971-3514077:-1
so has part: feature:3513971-3514077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3513971-3514077:-1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X1
translation: MDSKDDSSHVWPPSADHEESAAQVHFVPDAGTVAQIVYADDQVRPPQQVVYTADGASYASVDGPEHTLVYIHPVEAAQTLFTDPGQVAYVQQDATAQQASLPVHNQVLPSIEGVDGSDPLATLQNPMGRLEAKEEEEEEEDEDSEDDEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHSSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVREAELKDCYIHLKVSLDKGDRKDRDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKCDDGAQDLLHFPTKEQLDEAEPATLNGLDQPEPPALPIPPLPQDPQASLEPEPEVHSLQLQPQHEESVLPAQSTLTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDLCNKGFISSASLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAVHISDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEYAQLPNTIHTPLTTAVISAAPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSASGLQQPQHIQLQVVQVAPATSPHQSQQSTVDVGQLHDPQTYTQHAIQVQHIHVTEPPAPAAPTSQVAGQPLSPSPQPSQQGLSPAHIPGGSSAQGQPQGSTVQHTYLPNTWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTPGHYVLSESQPELEEKQATALSGGVQVQPAAHSDLDPQTTSQQPTQYIITTTTNGNGSSEVHISKP
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(3531716..3531784,3534160..3534324,3536001..3536060,3543480..3543705,3545506..3545747,3547112..3547315,3550613..3550685,3552891..3553008,3555626..3555755,3556497..3556739,3561770..3562117,3563559..3563714,3568187..3568366,3569273..3569383,3570383..3570583,3571209..3571352,3572032..3572202,3573441..3573581,3575888..3576044,3579054..3579157,3581222..3581419)
location: region:3531716-3581419:1
so has part: feature:3531716-3531784:1:exon
so has part: feature:3534160-3534324:1:exon
so has part: feature:3536001-3536060:1:exon
so has part: feature:3543480-3543705:1:exon
so has part: feature:3545506-3545747:1:exon
so has part: feature:3547112-3547315:1:exon
so has part: feature:3550613-3550685:1:exon
so has part: feature:3552891-3553008:1:exon
so has part: feature:3555626-3555755:1:exon
so has part: feature:3556497-3556739:1:exon
so has part: feature:3561770-3562117:1:exon
so has part: feature:3563559-3563714:1:exon
so has part: feature:3568187-3568366:1:exon
so has part: feature:3569273-3569383:1:exon
so has part: feature:3570383-3570583:1:exon
so has part: feature:3571209-3571352:1:exon
so has part: feature:3572032-3572202:1:exon
so has part: feature:3573441-3573581:1:exon
so has part: feature:3575888-3576044:1:exon
so has part: feature:3579054-3579157:1:exon
so has part: feature:3581222-3581419:1:exon

XP_031299236.1
type: Protein
SIO_000068: ncbiprotein

position:3531716:1
position: 3531716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3581419:1
position: 3581419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3531716-3531784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3534160-3534324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3536001-3536060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3543480-3543705:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3545506-3545747:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3547112-3547315:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3550613-3550685:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3552891-3553008:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3555626-3555755:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3556497-3556739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3561770-3562117:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3563559-3563714:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3568187-3568366:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3569273-3569383:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3570383-3570583:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3571209-3571352:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3572032-3572202:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3573441-3573581:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3575888-3576044:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3579054-3579157:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3581222-3581419:1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X2
translation: MDSKDDSSHVWPPSADHEESAAQVHFVPDAGTVAQIVYADDQVRPPQQVVYTADGASYASVDGPEHTLVYIHPVEAAQTLFTDPGQVAYVQQDATAQQASLPVHNQVLPSIEGVDGSDPLATLQNPMGRLEAKEEEEEEEDEDSEDDEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHSSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVREAELKDCYIHLKVSLDKGDRKDRDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKCDDGAQEQLDEAEPATLNGLDQPEPPALPIPPLPQDPQASLEPEPEVHSLQLQPQHEESVLPAQSTLTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDLCNKGFISSASLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAVHISDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEYAQLPNTIHTPLTTAVISAAPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSASGLQQPQHIQLQVVQVAPATSPHQSQQSTVDVGQLHDPQTYTQHAIQVQHIHVTEPPAPAAPTSQVAGQPLSPSPQPSQQGLSPAHIPGGSSAQGQPQGSTVQHTYLPNTWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTPGHYVLSESQPELEEKQATALSGGVQVQPAAHSDLDPQTTSQQPTQYIITTTTNGNGSSEVHISKP
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(3531716..3531784,3534160..3534324,3536001..3536060,3543480..3543705,3545506..3545747,3547112..3547315,3550613..3550685,3552891..3553008,3555626..3555755,3556521..3556739,3561770..3562117,3563559..3563714,3568187..3568366,3569273..3569383,3570383..3570583,3571209..3571352,3572032..3572202,3573441..3573581,3575888..3576044,3579054..3579157,3581222..3581419)
location: region:3531716-3581419:1
so has part: feature:3531716-3531784:1:exon
so has part: feature:3534160-3534324:1:exon
so has part: feature:3536001-3536060:1:exon
so has part: feature:3543480-3543705:1:exon
so has part: feature:3545506-3545747:1:exon
so has part: feature:3547112-3547315:1:exon
so has part: feature:3550613-3550685:1:exon
so has part: feature:3552891-3553008:1:exon
so has part: feature:3555626-3555755:1:exon
so has part: feature:3556521-3556739:1:exon
so has part: feature:3561770-3562117:1:exon
so has part: feature:3563559-3563714:1:exon
so has part: feature:3568187-3568366:1:exon
so has part: feature:3569273-3569383:1:exon
so has part: feature:3570383-3570583:1:exon
so has part: feature:3571209-3571352:1:exon
so has part: feature:3572032-3572202:1:exon
so has part: feature:3573441-3573581:1:exon
so has part: feature:3575888-3576044:1:exon
so has part: feature:3579054-3579157:1:exon
so has part: feature:3581222-3581419:1:exon

XP_031299238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3531716-3531784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3534160-3534324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3536001-3536060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3543480-3543705:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3545506-3545747:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3547112-3547315:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3550613-3550685:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3552891-3553008:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3555626-3555755:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3556521-3556739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3561770-3562117:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3563559-3563714:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3568187-3568366:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3569273-3569383:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3570383-3570583:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3571209-3571352:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3572032-3572202:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3573441-3573581:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3575888-3576044:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3579054-3579157:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3581222-3581419:1:exon

PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PRDM10
product: PR/SET domain 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031443379.1
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(3534246..3534352,3536001..3536060,3543480..3543705,3545506..3545747,3547112..3547315,3550613..3550685,3552891..3553008,3555626..3555755,3556497..3556739,3561770..3562117,3563559..3563714,3568187..3568366,3569273..3569383,3570383..3570583,3571209..3571352,3572032..3572202,3573441..3573581,3575888..3576044,3579054..3579157,3581222..3584196)
location: region:3534246-3584196:1
so has part: feature:3534246-3534352:1:exon
so has part: feature:3536001-3536060:1:exon
so has part: feature:3543480-3543705:1:exon
so has part: feature:3545506-3545747:1:exon
so has part: feature:3547112-3547315:1:exon
so has part: feature:3550613-3550685:1:exon
so has part: feature:3552891-3553008:1:exon
so has part: feature:3555626-3555755:1:exon
so has part: feature:3556497-3556739:1:exon
so has part: feature:3561770-3562117:1:exon
so has part: feature:3563559-3563714:1:exon
so has part: feature:3568187-3568366:1:exon
so has part: feature:3569273-3569383:1:exon
so has part: feature:3570383-3570583:1:exon
so has part: feature:3571209-3571352:1:exon
so has part: feature:3572032-3572202:1:exon
so has part: feature:3573441-3573581:1:exon
so has part: feature:3575888-3576044:1:exon
so has part: feature:3579054-3579157:1:exon
so has part: feature:3581222-3584196:1:exon

position:3534246:1
position: 3534246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3534246-3534352:1:exon

position:3534352:1
position: 3534352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3536001-3536060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3543480-3543705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3545506-3545747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3547112-3547315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3550613-3550685:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3552891-3553008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3555626-3555755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3556497-3556739:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3561770-3562117:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3563559-3563714:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3568187-3568366:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3569273-3569383:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3570383-3570583:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3571209-3571352:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3572032-3572202:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3573441-3573581:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3575888-3576044:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3579054-3579157:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3581222-3584196:1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X3
translation: MGRLEAKEEEEEEEDEDSEDDEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHSSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVREAELKDCYIHLKVSLDKGDRKDRDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKCDDGAQDLLHFPTKEQLDEAEPATLNGLDQPEPPALPIPPLPQDPQASLEPEPEVHSLQLQPQHEESVLPAQSTLTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDLCNKGFISSASLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAVHISDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEYAQLPNTIHTPLTTAVISAAPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSASGLQQPQHIQLQVVQVAPATSPHQSQQSTVDVGQLHDPQTYTQHAIQVQHIHVTEPPAPAAPTSQVAGQPLSPSPQPSQQGLSPAHIPGGSSAQGQPQGSTVQHTYLPNTWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTPGHYVLSESQPELEEKQATALSGGVQVQPAAHSDLDPQTTSQQPTQYIITTTTNGNGSSEVHISKP
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(3543564..3543705,3545506..3545747,3547112..3547315,3550613..3550685,3552891..3553008,3555626..3555755,3556497..3556739,3561770..3562117,3563559..3563714,3568187..3568366,3569273..3569383,3570383..3570583,3571209..3571352,3572032..3572202,3573441..3573581,3575888..3576044,3579054..3579157,3581222..3581419)
location: region:3543564-3581419:1
so has part: feature:3543564-3543705:1:exon
so has part: feature:3545506-3545747:1:exon
so has part: feature:3547112-3547315:1:exon
so has part: feature:3550613-3550685:1:exon
so has part: feature:3552891-3553008:1:exon
so has part: feature:3555626-3555755:1:exon
so has part: feature:3556497-3556739:1:exon
so has part: feature:3561770-3562117:1:exon
so has part: feature:3563559-3563714:1:exon
so has part: feature:3568187-3568366:1:exon
so has part: feature:3569273-3569383:1:exon
so has part: feature:3570383-3570583:1:exon
so has part: feature:3571209-3571352:1:exon
so has part: feature:3572032-3572202:1:exon
so has part: feature:3573441-3573581:1:exon
so has part: feature:3575888-3576044:1:exon
so has part: feature:3579054-3579157:1:exon
so has part: feature:3581222-3581419:1:exon

XP_031299239.1
type: Protein
SIO_000068: ncbiprotein

position:3543564:1
position: 3543564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3543564-3543705:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3545506-3545747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3547112-3547315:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3550613-3550685:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3552891-3553008:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3555626-3555755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3556497-3556739:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3561770-3562117:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3563559-3563714:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3568187-3568366:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3569273-3569383:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3570383-3570583:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3571209-3571352:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3572032-3572202:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3573441-3573581:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3575888-3576044:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3579054-3579157:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3581222-3581419:1:exon

LOC116150264
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150264
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3567102..3567208)
location: region:3567102-3567208:-1
so has part: feature:3567102-3567208:-1:exon
subclass of: SO_0000623

116150264
type: Gene
SIO_000068: ncbigene

position:3567102:-1
position: 3567102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3567208:-1
position: 3567208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3567102-3567208:-1:exon

LOC116150264
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snRNA
gene: LOC116150264
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004133980.1
SIO_010081: LOC116150264
subclass of: SO_0000673
so part of: LOC116150264
location: complement(3567102..3567208)
location: region:3567102-3567208:-1
so has part: feature:3567102-3567208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3567102-3567208:-1:exon

NFRKB
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: NFRKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3585138..3617238
location: region:3585138-3617238:1
so has part: feature:3585138-3617238:1:exon
subclass of: SO_0000010

105094291
type: Gene
SIO_000068: ncbigene

position:3585138:1
position: 3585138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3617238:1
position: 3617238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3585138-3617238:1:exon

NFRKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NFRKB
product: nuclear factor related to kappaB binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_031443380.1
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: join(3585138..3585243,3587494..3587649,3590018..3590219,3592205..3592332,3592978..3593152,3593588..3593725,3594293..3594366,3595116..3595200,3595559..3595739,3595979..3596087,3596316..3596442,3596668..3596733,3599976..3600055,3600145..3600191,3601427..3601487,3601918..3602092,3602965..3603071,3603437..3603560,3603739..3603818,3603940..3604157,3604257..3604509,3604928..3605140,3608104..3608871,3611698..3611804,3612967..3613102,3613196..3617238)
location: region:3585138-3617238:1
so has part: feature:3585138-3585243:1:exon
so has part: feature:3587494-3587649:1:exon
so has part: feature:3590018-3590219:1:exon
so has part: feature:3592205-3592332:1:exon
so has part: feature:3592978-3593152:1:exon
so has part: feature:3593588-3593725:1:exon
so has part: feature:3594293-3594366:1:exon
so has part: feature:3595116-3595200:1:exon
so has part: feature:3595559-3595739:1:exon
so has part: feature:3595979-3596087:1:exon
so has part: feature:3596316-3596442:1:exon
so has part: feature:3596668-3596733:1:exon
so has part: feature:3599976-3600055:1:exon
so has part: feature:3600145-3600191:1:exon
so has part: feature:3601427-3601487:1:exon
so has part: feature:3601918-3602092:1:exon
so has part: feature:3602965-3603071:1:exon
so has part: feature:3603437-3603560:1:exon
so has part: feature:3603739-3603818:1:exon
so has part: feature:3603940-3604157:1:exon
so has part: feature:3604257-3604509:1:exon
so has part: feature:3604928-3605140:1:exon
so has part: feature:3608104-3608871:1:exon
so has part: feature:3611698-3611804:1:exon
so has part: feature:3612967-3613102:1:exon
so has part: feature:3613196-3617238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3585138-3585243:1:exon

position:3585243:1
position: 3585243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3587494-3587649:1:exon

position:3587494:1
position: 3587494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3587649:1
position: 3587649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3590018-3590219:1:exon

position:3590018:1
position: 3590018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3590219:1
position: 3590219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3592205-3592332:1:exon

position:3592205:1
position: 3592205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3592332:1
position: 3592332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3592978-3593152:1:exon

position:3592978:1
position: 3592978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3593152:1
position: 3593152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3593588-3593725:1:exon

position:3593588:1
position: 3593588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3593725:1
position: 3593725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3594293-3594366:1:exon

position:3594293:1
position: 3594293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3594366:1
position: 3594366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3595116-3595200:1:exon

position:3595116:1
position: 3595116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3595200:1
position: 3595200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3595559-3595739:1:exon

position:3595559:1
position: 3595559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3595739:1
position: 3595739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3595979-3596087:1:exon

position:3595979:1
position: 3595979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3596087:1
position: 3596087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3596316-3596442:1:exon

position:3596316:1
position: 3596316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3596442:1
position: 3596442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3596668-3596733:1:exon

position:3596668:1
position: 3596668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3596733:1
position: 3596733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3599976-3600055:1:exon

position:3599976:1
position: 3599976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3600055:1
position: 3600055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3600145-3600191:1:exon

position:3600145:1
position: 3600145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3600191:1
position: 3600191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3601427-3601487:1:exon

position:3601427:1
position: 3601427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3601487:1
position: 3601487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3601918-3602092:1:exon

position:3601918:1
position: 3601918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3602092:1
position: 3602092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3602965-3603071:1:exon

position:3602965:1
position: 3602965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3603071:1
position: 3603071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3603437-3603560:1:exon

position:3603437:1
position: 3603437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3603560:1
position: 3603560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3603739-3603818:1:exon

position:3603739:1
position: 3603739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3603818:1
position: 3603818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3603940-3604157:1:exon

position:3603940:1
position: 3603940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3604157:1
position: 3604157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3604257-3604509:1:exon

position:3604257:1
position: 3604257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3604509:1
position: 3604509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3604928-3605140:1:exon

position:3604928:1
position: 3604928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3605140:1
position: 3605140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3608104-3608871:1:exon

position:3608104:1
position: 3608104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3608871:1
position: 3608871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3611698-3611804:1:exon

position:3611698:1
position: 3611698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3611804:1
position: 3611804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3612967-3613102:1:exon

position:3612967:1
position: 3612967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3613102:1
position: 3613102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3613196-3617238:1:exon

position:3613196:1
position: 3613196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NFRKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NFRKB
product: nuclear factor related to kappaB binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_031443381.1
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: join(3585138..3585243,3587494..3587649,3590018..3590219,3592205..3592332,3592978..3593152,3593588..3593725,3594293..3594366,3595116..3595200,3595559..3595739,3595979..3596087,3596316..3596442,3596668..3596733,3599976..3600055,3600145..3600191,3601430..3601487,3601918..3602092,3602965..3603071,3603437..3603560,3603739..3603818,3603940..3604157,3604257..3604509,3604928..3605140,3608104..3608871,3611698..3611804,3612967..3613102,3613196..3617238)
location: region:3585138-3617238:1
so has part: feature:3585138-3585243:1:exon
so has part: feature:3587494-3587649:1:exon
so has part: feature:3590018-3590219:1:exon
so has part: feature:3592205-3592332:1:exon
so has part: feature:3592978-3593152:1:exon
so has part: feature:3593588-3593725:1:exon
so has part: feature:3594293-3594366:1:exon
so has part: feature:3595116-3595200:1:exon
so has part: feature:3595559-3595739:1:exon
so has part: feature:3595979-3596087:1:exon
so has part: feature:3596316-3596442:1:exon
so has part: feature:3596668-3596733:1:exon
so has part: feature:3599976-3600055:1:exon
so has part: feature:3600145-3600191:1:exon
so has part: feature:3601430-3601487:1:exon
so has part: feature:3601918-3602092:1:exon
so has part: feature:3602965-3603071:1:exon
so has part: feature:3603437-3603560:1:exon
so has part: feature:3603739-3603818:1:exon
so has part: feature:3603940-3604157:1:exon
so has part: feature:3604257-3604509:1:exon
so has part: feature:3604928-3605140:1:exon
so has part: feature:3608104-3608871:1:exon
so has part: feature:3611698-3611804:1:exon
so has part: feature:3612967-3613102:1:exon
so has part: feature:3613196-3617238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3585138-3585243:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3587494-3587649:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3590018-3590219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3592205-3592332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3592978-3593152:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3593588-3593725:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3594293-3594366:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3595116-3595200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3595559-3595739:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3595979-3596087:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3596316-3596442:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3596668-3596733:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3599976-3600055:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3600145-3600191:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3601430-3601487:1:exon

position:3601430:1
position: 3601430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3601918-3602092:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3602965-3603071:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3603437-3603560:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3603739-3603818:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3603940-3604157:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3604257-3604509:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3604928-3605140:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3608104-3608871:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3611698-3611804:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3612967-3613102:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3613196-3617238:1:exon

NFRKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NFRKB
product: nuclear factor related to kappaB binding protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_031443382.1
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: join(3585138..3585243,3587494..3587649,3590018..3590219,3592205..3592332,3592978..3593152,3593624..3593725,3594293..3594366,3595116..3595200,3595559..3595739,3595979..3596087,3596316..3596442,3596668..3596733,3599976..3600055,3600145..3600191,3601427..3601487,3601918..3602092,3602965..3603071,3603437..3603560,3603739..3603818,3603940..3604157,3604257..3604509,3604928..3605140,3608104..3608871,3611698..3611804,3612967..3613102,3613196..3617238)
location: region:3585138-3617238:1
so has part: feature:3585138-3585243:1:exon
so has part: feature:3587494-3587649:1:exon
so has part: feature:3590018-3590219:1:exon
so has part: feature:3592205-3592332:1:exon
so has part: feature:3592978-3593152:1:exon
so has part: feature:3593624-3593725:1:exon
so has part: feature:3594293-3594366:1:exon
so has part: feature:3595116-3595200:1:exon
so has part: feature:3595559-3595739:1:exon
so has part: feature:3595979-3596087:1:exon
so has part: feature:3596316-3596442:1:exon
so has part: feature:3596668-3596733:1:exon
so has part: feature:3599976-3600055:1:exon
so has part: feature:3600145-3600191:1:exon
so has part: feature:3601427-3601487:1:exon
so has part: feature:3601918-3602092:1:exon
so has part: feature:3602965-3603071:1:exon
so has part: feature:3603437-3603560:1:exon
so has part: feature:3603739-3603818:1:exon
so has part: feature:3603940-3604157:1:exon
so has part: feature:3604257-3604509:1:exon
so has part: feature:3604928-3605140:1:exon
so has part: feature:3608104-3608871:1:exon
so has part: feature:3611698-3611804:1:exon
so has part: feature:3612967-3613102:1:exon
so has part: feature:3613196-3617238:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3585138-3585243:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3587494-3587649:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3590018-3590219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3592205-3592332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3592978-3593152:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3593624-3593725:1:exon

position:3593624:1
position: 3593624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3594293-3594366:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3595116-3595200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3595559-3595739:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3595979-3596087:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3596316-3596442:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3596668-3596733:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3599976-3600055:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3600145-3600191:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3601427-3601487:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3601918-3602092:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3602965-3603071:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3603437-3603560:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3603739-3603818:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3603940-3604157:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3604257-3604509:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3604928-3605140:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3608104-3608871:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3611698-3611804:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3612967-3613102:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3613196-3617238:1:exon

NFRKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NFRKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor related to kappa-B-binding protein isoform X1
translation: MDSLDHMLTDPLELGPCGDGHGTRIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWREVLSDCQREHLQQFLPHFPEDGIQQQNQLILALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCFKSQYKRYLSSQQQYFHRLLRQILASRNDLLEMARHSGPAPPCRQKRPSPSRTPEEREWRTQQRYLKVLREVKEECGDTALSSDEEATLDLQEKFSFEDLSSWLPSSPARSPSPAVPLRVVPTLCTTDMKTADKLELGESDLKVMLRKHHEKRKYQPDHPDLLTGDLTLSDIMMRVNAGRKGSLAALYDLAVLKKKVKEKEERKKKKIKMIKSETEDLVEPLSSAEGLPPLSQAPSPLAIPVIKEEPLEDLKPCLGINEISSSFFSLLLEILLLEGQTSLPMLEERVLDWQSSPASSLNSWFSAAPNWAELVLPALQCLAGESRAMPSGFSPFVEFKEKTQQWKLLGQSQDNEKELAALFQLWLETKDQAFCKQENEDSSDATMPVPRVRTDYVVRPSTGEEKRAFQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSSSKESSVKVLGGGPSEQSQMSLSDSSMPPTPVTPVTPKTPLARHPISPPPVSSVNKSGPTAVSEPAKSSSGVLLVSSPTMPQLGTMLSPASSQTPPSSQAAARVVSHTGSAGLPQVRVMAQPGLPAVNQQSAGPAPTLPQIRVPATATQTKVVPQTVMATVPVKAQTAASTVQRPGPGPAGLTVTSLPAAANPVSKPATSSPGSSAQGAPTAAVIQNVTGQNIIKQVAITGQLGVKPQAGSSVPLTAANFRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGTGSGTAGKGISATLHVTSNPVHAADSPAKASPASVPSSTPTGTTVVKVTPDLKPTEASGSAFRLMPALGVSVADQKGKTTVASSEAKPAATIRIVQGLGVMPPKAGQTITVAAHAKQGSSVASGSGTVHTSAVSLPSVNAATSKTVAVASGSASSPISIGTGAPAVRQVPVSTTVVSTSQAGKLPARITVPLSVISQPVKGKSVVTAPIIKGNLGANLSGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQPGTASGSSKAVSTVVVTTAPSPKQAPDQQ
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: join(3587515..3587649,3590018..3590219,3592205..3592332,3592978..3593152,3593588..3593725,3594293..3594366,3595116..3595200,3595559..3595739,3595979..3596087,3596316..3596442,3596668..3596733,3599976..3600055,3600145..3600191,3601427..3601487,3601918..3602092,3602965..3603071,3603437..3603560,3603739..3603818,3603940..3604157,3604257..3604509,3604928..3605140,3608104..3608871,3611698..3611804,3612967..3613102,3613196..3613321)
location: region:3587515-3613321:1
so has part: feature:3587515-3587649:1:exon
so has part: feature:3590018-3590219:1:exon
so has part: feature:3592205-3592332:1:exon
so has part: feature:3592978-3593152:1:exon
so has part: feature:3593588-3593725:1:exon
so has part: feature:3594293-3594366:1:exon
so has part: feature:3595116-3595200:1:exon
so has part: feature:3595559-3595739:1:exon
so has part: feature:3595979-3596087:1:exon
so has part: feature:3596316-3596442:1:exon
so has part: feature:3596668-3596733:1:exon
so has part: feature:3599976-3600055:1:exon
so has part: feature:3600145-3600191:1:exon
so has part: feature:3601427-3601487:1:exon
so has part: feature:3601918-3602092:1:exon
so has part: feature:3602965-3603071:1:exon
so has part: feature:3603437-3603560:1:exon
so has part: feature:3603739-3603818:1:exon
so has part: feature:3603940-3604157:1:exon
so has part: feature:3604257-3604509:1:exon
so has part: feature:3604928-3605140:1:exon
so has part: feature:3608104-3608871:1:exon
so has part: feature:3611698-3611804:1:exon
so has part: feature:3612967-3613102:1:exon
so has part: feature:3613196-3613321:1:exon

XP_031299240.1
type: Protein
SIO_000068: ncbiprotein

position:3587515:1
position: 3587515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3613321:1
position: 3613321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3587515-3587649:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3590018-3590219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3592205-3592332:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3592978-3593152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3593588-3593725:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3594293-3594366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3595116-3595200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3595559-3595739:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3595979-3596087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3596316-3596442:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3596668-3596733:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3599976-3600055:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3600145-3600191:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3601427-3601487:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3601918-3602092:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3602965-3603071:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3603437-3603560:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3603739-3603818:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3603940-3604157:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3604257-3604509:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3604928-3605140:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3608104-3608871:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3611698-3611804:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3612967-3613102:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3613196-3613321:1:exon

NFRKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NFRKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor related to kappa-B-binding protein isoform X2
translation: MDSLDHMLTDPLELGPCGDGHGTRIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWREVLSDCQREHLQQFLPHFPEDGIQQQNQLILALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCFKSQYKRYLSSQQQYFHRLLRQILASRNDLLEMARHSGPAPPCRQKRPSPSRTPEEREWRTQQRYLKVLREVKEECGDTALSSDEEATLDLQEKFSFEDLSSWLPSSPARSPSPAVPLRVVPTLCTTDMKTADKLELGESDLKVMLRKHHEKRKYQPDHPDLLTGDLTLSDIMMRVNAGRKGSLAALYDLAVLKKKVKEKEERKKKKIKMIKSETEDLVEPLSSAEGLPPLSQAPSPLAIPVIKEEPLEDLKPCLGINEISSSFFSLLLEILLLEGQTSLPMLEERVLDWQSSPASSLNSWFSAAPNWAELVLPALQCLAGESRAMPSGFSPFVEFKEKTQQWKLLGQSQDNEKELAALFQLWLETKDQAFCKQENEDSSDATMPVPRVTDYVVRPSTGEEKRAFQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSSSKESSVKVLGGGPSEQSQMSLSDSSMPPTPVTPVTPKTPLARHPISPPPVSSVNKSGPTAVSEPAKSSSGVLLVSSPTMPQLGTMLSPASSQTPPSSQAAARVVSHTGSAGLPQVRVMAQPGLPAVNQQSAGPAPTLPQIRVPATATQTKVVPQTVMATVPVKAQTAASTVQRPGPGPAGLTVTSLPAAANPVSKPATSSPGSSAQGAPTAAVIQNVTGQNIIKQVAITGQLGVKPQAGSSVPLTAANFRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGTGSGTAGKGISATLHVTSNPVHAADSPAKASPASVPSSTPTGTTVVKVTPDLKPTEASGSAFRLMPALGVSVADQKGKTTVASSEAKPAATIRIVQGLGVMPPKAGQTITVAAHAKQGSSVASGSGTVHTSAVSLPSVNAATSKTVAVASGSASSPISIGTGAPAVRQVPVSTTVVSTSQAGKLPARITVPLSVISQPVKGKSVVTAPIIKGNLGANLSGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQPGTASGSSKAVSTVVVTTAPSPKQAPDQQ
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: join(3587515..3587649,3590018..3590219,3592205..3592332,3592978..3593152,3593588..3593725,3594293..3594366,3595116..3595200,3595559..3595739,3595979..3596087,3596316..3596442,3596668..3596733,3599976..3600055,3600145..3600191,3601430..3601487,3601918..3602092,3602965..3603071,3603437..3603560,3603739..3603818,3603940..3604157,3604257..3604509,3604928..3605140,3608104..3608871,3611698..3611804,3612967..3613102,3613196..3613321)
location: region:3587515-3613321:1
so has part: feature:3587515-3587649:1:exon
so has part: feature:3590018-3590219:1:exon
so has part: feature:3592205-3592332:1:exon
so has part: feature:3592978-3593152:1:exon
so has part: feature:3593588-3593725:1:exon
so has part: feature:3594293-3594366:1:exon
so has part: feature:3595116-3595200:1:exon
so has part: feature:3595559-3595739:1:exon
so has part: feature:3595979-3596087:1:exon
so has part: feature:3596316-3596442:1:exon
so has part: feature:3596668-3596733:1:exon
so has part: feature:3599976-3600055:1:exon
so has part: feature:3600145-3600191:1:exon
so has part: feature:3601430-3601487:1:exon
so has part: feature:3601918-3602092:1:exon
so has part: feature:3602965-3603071:1:exon
so has part: feature:3603437-3603560:1:exon
so has part: feature:3603739-3603818:1:exon
so has part: feature:3603940-3604157:1:exon
so has part: feature:3604257-3604509:1:exon
so has part: feature:3604928-3605140:1:exon
so has part: feature:3608104-3608871:1:exon
so has part: feature:3611698-3611804:1:exon
so has part: feature:3612967-3613102:1:exon
so has part: feature:3613196-3613321:1:exon

XP_031299241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3587515-3587649:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3590018-3590219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3592205-3592332:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3592978-3593152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3593588-3593725:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3594293-3594366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3595116-3595200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3595559-3595739:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3595979-3596087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3596316-3596442:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3596668-3596733:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3599976-3600055:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3600145-3600191:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3601430-3601487:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3601918-3602092:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3602965-3603071:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3603437-3603560:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3603739-3603818:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3603940-3604157:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3604257-3604509:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3604928-3605140:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3608104-3608871:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3611698-3611804:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3612967-3613102:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3613196-3613321:1:exon

NFRKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NFRKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor related to kappa-B-binding protein isoform X3
translation: MDSLDHMLTDPLELGPCGDGHGTRIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWREVLSDCQREHLQQFLPHFPEDGIQQQNQLILALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCFKSQYKRYLSSQQQYFHRLLRQILASRNDLLEMARHSGPAPPCRQKRPSPSRTPEEREWRTQQRYLKVLREVKEECGDTALSSDEEDLSSWLPSSPARSPSPAVPLRVVPTLCTTDMKTADKLELGESDLKVMLRKHHEKRKYQPDHPDLLTGDLTLSDIMMRVNAGRKGSLAALYDLAVLKKKVKEKEERKKKKIKMIKSETEDLVEPLSSAEGLPPLSQAPSPLAIPVIKEEPLEDLKPCLGINEISSSFFSLLLEILLLEGQTSLPMLEERVLDWQSSPASSLNSWFSAAPNWAELVLPALQCLAGESRAMPSGFSPFVEFKEKTQQWKLLGQSQDNEKELAALFQLWLETKDQAFCKQENEDSSDATMPVPRVRTDYVVRPSTGEEKRAFQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSSSKESSVKVLGGGPSEQSQMSLSDSSMPPTPVTPVTPKTPLARHPISPPPVSSVNKSGPTAVSEPAKSSSGVLLVSSPTMPQLGTMLSPASSQTPPSSQAAARVVSHTGSAGLPQVRVMAQPGLPAVNQQSAGPAPTLPQIRVPATATQTKVVPQTVMATVPVKAQTAASTVQRPGPGPAGLTVTSLPAAANPVSKPATSSPGSSAQGAPTAAVIQNVTGQNIIKQVAITGQLGVKPQAGSSVPLTAANFRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGTGSGTAGKGISATLHVTSNPVHAADSPAKASPASVPSSTPTGTTVVKVTPDLKPTEASGSAFRLMPALGVSVADQKGKTTVASSEAKPAATIRIVQGLGVMPPKAGQTITVAAHAKQGSSVASGSGTVHTSAVSLPSVNAATSKTVAVASGSASSPISIGTGAPAVRQVPVSTTVVSTSQAGKLPARITVPLSVISQPVKGKSVVTAPIIKGNLGANLSGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQPGTASGSSKAVSTVVVTTAPSPKQAPDQQ
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: join(3587515..3587649,3590018..3590219,3592205..3592332,3592978..3593152,3593624..3593725,3594293..3594366,3595116..3595200,3595559..3595739,3595979..3596087,3596316..3596442,3596668..3596733,3599976..3600055,3600145..3600191,3601427..3601487,3601918..3602092,3602965..3603071,3603437..3603560,3603739..3603818,3603940..3604157,3604257..3604509,3604928..3605140,3608104..3608871,3611698..3611804,3612967..3613102,3613196..3613321)
location: region:3587515-3613321:1
so has part: feature:3587515-3587649:1:exon
so has part: feature:3590018-3590219:1:exon
so has part: feature:3592205-3592332:1:exon
so has part: feature:3592978-3593152:1:exon
so has part: feature:3593624-3593725:1:exon
so has part: feature:3594293-3594366:1:exon
so has part: feature:3595116-3595200:1:exon
so has part: feature:3595559-3595739:1:exon
so has part: feature:3595979-3596087:1:exon
so has part: feature:3596316-3596442:1:exon
so has part: feature:3596668-3596733:1:exon
so has part: feature:3599976-3600055:1:exon
so has part: feature:3600145-3600191:1:exon
so has part: feature:3601427-3601487:1:exon
so has part: feature:3601918-3602092:1:exon
so has part: feature:3602965-3603071:1:exon
so has part: feature:3603437-3603560:1:exon
so has part: feature:3603739-3603818:1:exon
so has part: feature:3603940-3604157:1:exon
so has part: feature:3604257-3604509:1:exon
so has part: feature:3604928-3605140:1:exon
so has part: feature:3608104-3608871:1:exon
so has part: feature:3611698-3611804:1:exon
so has part: feature:3612967-3613102:1:exon
so has part: feature:3613196-3613321:1:exon

XP_031299242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3587515-3587649:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3590018-3590219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3592205-3592332:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3592978-3593152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3593624-3593725:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3594293-3594366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3595116-3595200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3595559-3595739:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3595979-3596087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3596316-3596442:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3596668-3596733:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3599976-3600055:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3600145-3600191:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3601427-3601487:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3601918-3602092:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3602965-3603071:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3603437-3603560:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3603739-3603818:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3603940-3604157:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3604257-3604509:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3604928-3605140:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3608104-3608871:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3611698-3611804:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3612967-3613102:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3613196-3613321:1:exon

TMEM45B
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TMEM45B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3616955..3643319)
location: region:3616955-3643319:-1
so has part: feature:3616955-3643319:-1:exon
subclass of: SO_0000010

105094278
type: Gene
SIO_000068: ncbigene

position:3616955:-1
position: 3616955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3643319:-1
position: 3643319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3616955-3643319:-1:exon

TMEM45B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TMEM45B
product: transmembrane protein 45B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_031443383.1
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: complement(join(3616955..3617721,3618728..3618873,3619360..3619544,3620346..3620552,3622406..3622602,3643169..3643319))
location: region:3616955-3643319:-1
so has part: feature:3643169-3643319:-1:exon
so has part: feature:3622406-3622602:-1:exon
so has part: feature:3620346-3620552:-1:exon
so has part: feature:3619360-3619544:-1:exon
so has part: feature:3618728-3618873:-1:exon
so has part: feature:3616955-3617721:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3643169-3643319:-1:exon

position:3643169:-1
position: 3643169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3622406-3622602:-1:exon

position:3622406:-1
position: 3622406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3622602:-1
position: 3622602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3620346-3620552:-1:exon

position:3620346:-1
position: 3620346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3620552:-1
position: 3620552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3619360-3619544:-1:exon

position:3619360:-1
position: 3619360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3619544:-1
position: 3619544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3618728-3618873:-1:exon

position:3618728:-1
position: 3618728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3618873:-1
position: 3618873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3616955-3617721:-1:exon

position:3617721:-1
position: 3617721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM45B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TMEM45B
product: transmembrane protein 45B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_010986277.2
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: complement(join(3616955..3617721,3618728..3618873,3619360..3619544,3620346..3620552,3622406..3623201))
location: region:3616955-3623201:-1
so has part: feature:3622406-3623201:-1:exon
so has part: feature:3620346-3620552:-1:exon
so has part: feature:3619360-3619544:-1:exon
so has part: feature:3618728-3618873:-1:exon
so has part: feature:3616955-3617721:-1:exon

position:3623201:-1
position: 3623201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3622406-3623201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3620346-3620552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3619360-3619544:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3618728-3618873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3616955-3617721:-1:exon

TMEM45B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TMEM45B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B isoform X1
translation: MYCVSCRNIHMFFPPFSHLTIVSLLFRCPWTVMANFKGHALPGSFFLIVGLWWSVKYPLKYFHRKGKSSQLTHYYQRLEITEAAIRTLFSVIGVLAEQFVPDGPHLHLSQESHWVKLMNWQHSTMYLFFAASGVADMLTYLSAHTPVGLDRLVMAVAVFNEGFLFYYHVHNRPPLDQHIHSLLLYAVFGGALSIALEVILRDNIVLELFRTSLAILQGTWFWQIGFVLFPPFGGPEWDQSDHNNIMFITMCFSWHYLAALCTVAISYSLVHCFLTRVKRHGEREIIGIQKLKSDHTYQTALLGGSDED
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: complement(join(3617610..3617721,3618728..3618873,3619360..3619544,3620346..3620552,3622406..3622682))
location: region:3617610-3622682:-1
so has part: feature:3622406-3622682:-1:exon
so has part: feature:3620346-3620552:-1:exon
so has part: feature:3619360-3619544:-1:exon
so has part: feature:3618728-3618873:-1:exon
so has part: feature:3617610-3617721:-1:exon

XP_010984579.2
type: Protein
SIO_000068: ncbiprotein

position:3617610:-1
position: 3617610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3622682:-1
position: 3622682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3622406-3622682:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3620346-3620552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3619360-3619544:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3618728-3618873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3617610-3617721:-1:exon

TMEM45B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TMEM45B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B isoform X2
translation: MANFKGHALPGSFFLIVGLWWSVKYPLKYFHRKGKSSQLTHYYQRLEITEAAIRTLFSVIGVLAEQFVPDGPHLHLSQESHWVKLMNWQHSTMYLFFAASGVADMLTYLSAHTPVGLDRLVMAVAVFNEGFLFYYHVHNRPPLDQHIHSLLLYAVFGGALSIALEVILRDNIVLELFRTSLAILQGTWFWQIGFVLFPPFGGPEWDQSDHNNIMFITMCFSWHYLAALCTVAISYSLVHCFLTRVKRHGEREIIGIQKLKSDHTYQTALLGGSDED
SIO_010081: TMEM45B
subclass of: SO_0000673
so part of: TMEM45B
location: complement(join(3617610..3617721,3618728..3618873,3619360..3619544,3620346..3620552,3622406..3622586))
location: region:3617610-3622586:-1
so has part: feature:3622406-3622586:-1:exon
so has part: feature:3620346-3620552:-1:exon
so has part: feature:3619360-3619544:-1:exon
so has part: feature:3618728-3618873:-1:exon
so has part: feature:3617610-3617721:-1:exon

XP_031299243.1
type: Protein
SIO_000068: ncbiprotein

position:3622586:-1
position: 3622586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3622406-3622586:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3620346-3620552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3619360-3619544:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3618728-3618873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3617610-3617721:-1:exon

TRNAT-AGU
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAT-AGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3661362..3661433)
location: region:3661362-3661433:-1
so has part: feature:3661362-3661433:-1:exon
subclass of: SO_0000663

116150279
type: Gene
SIO_000068: ncbigene

position:3661362:-1
position: 3661362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3661433:-1
position: 3661433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3661362-3661433:-1:exon

TRNAT-AGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAT-AGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3661399..3661401),aa:Thr, seq:agt)
SIO_010081: TRNAT-AGU
subclass of: SO_0000673
so part of: TRNAT-AGU
location: complement(3661362..3661433)
location: region:3661362-3661433:-1
so has part: feature:3661362-3661433:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3661362-3661433:-1:exon

LOC116150164
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3661721..3671715
location: region:3661721-3671715:1
so has part: feature:3661721-3671715:1:exon
subclass of: SO_0000011

116150164
type: Gene
SIO_000068: ncbigene

position:3661721:1
position: 3661721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3671715:1
position: 3671715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3661721-3671715:1:exon

LOC116150164
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150164
product: uncharacterized LOC116150164
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004133818.1
SIO_010081: LOC116150164
subclass of: SO_0000673
so part of: LOC116150164
location: join(3661721..3664916,3668486..3671715)
location: region:3661721-3671715:1
so has part: feature:3661721-3664916:1:exon
so has part: feature:3668486-3671715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3661721-3664916:1:exon

position:3664916:1
position: 3664916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3668486-3671715:1:exon

position:3668486:1
position: 3668486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116150270
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150270
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3682429..3682490
location: region:3682429-3682490:1
so has part: feature:3682429-3682490:1:exon
subclass of: SO_0000623

116150270
type: Gene
SIO_000068: ncbigene

position:3682429:1
position: 3682429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3682490:1
position: 3682490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3682429-3682490:1:exon

LOC116150270
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snRNA
gene: LOC116150270
product: U7 small nuclear RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00066
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004133986.1
SIO_010081: LOC116150270
subclass of: SO_0000673
so part of: LOC116150270
location: 3682429..3682490
location: region:3682429-3682490:1
so has part: feature:3682429-3682490:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3682429-3682490:1:exon

LOC105094277
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105094277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3735927..3806153
location: region:3735927-3806153:1
so has part: feature:3735927-3806153:1:exon
subclass of: SO_0000011

105094277
type: Gene
SIO_000068: ncbigene

position:3735927:1
position: 3735927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3806153:1
position: 3806153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3735927-3806153:1:exon

LOC105094277
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105094277
product: uncharacterized LOC105094277, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004133822.1
SIO_010081: LOC105094277
subclass of: SO_0000673
so part of: LOC105094277
location: join(3735927..3736386,3739068..3739184,3748194..3748340,3801672..3801830,3804946..3805418)
location: region:3735927-3805418:1
so has part: feature:3735927-3736386:1:exon
so has part: feature:3739068-3739184:1:exon
so has part: feature:3748194-3748340:1:exon
so has part: feature:3801672-3801830:1:exon
so has part: feature:3804946-3805418:1:exon

position:3805418:1
position: 3805418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3735927-3736386:1:exon

position:3736386:1
position: 3736386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3739068-3739184:1:exon

position:3739068:1
position: 3739068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3739184:1
position: 3739184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3748194-3748340:1:exon

position:3748194:1
position: 3748194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3748340:1
position: 3748340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3801672-3801830:1:exon

position:3801672:1
position: 3801672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3801830:1
position: 3801830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3804946-3805418:1:exon

position:3804946:1
position: 3804946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105094277
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105094277
product: uncharacterized LOC105094277, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004133823.1
SIO_010081: LOC105094277
subclass of: SO_0000673
so part of: LOC105094277
location: join(3736866..3737064,3739068..3739184,3748194..3748340,3801672..3801830,3804946..3805097,3806019..3806153)
location: region:3736866-3806153:1
so has part: feature:3736866-3737064:1:exon
so has part: feature:3739068-3739184:1:exon
so has part: feature:3748194-3748340:1:exon
so has part: feature:3801672-3801830:1:exon
so has part: feature:3804946-3805097:1:exon
so has part: feature:3806019-3806153:1:exon

position:3736866:1
position: 3736866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3736866-3737064:1:exon

position:3737064:1
position: 3737064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3739068-3739184:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3748194-3748340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3801672-3801830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3804946-3805097:1:exon

position:3805097:1
position: 3805097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3806019-3806153:1:exon

position:3806019:1
position: 3806019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105094277
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105094277
product: uncharacterized LOC105094277, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004133821.1
SIO_010081: LOC105094277
subclass of: SO_0000673
so part of: LOC105094277
location: join(3736866..3737064,3739068..3739184,3748194..3748340,3801672..3801830,3804946..3805418)
location: region:3736866-3805418:1
so has part: feature:3736866-3737064:1:exon
so has part: feature:3739068-3739184:1:exon
so has part: feature:3748194-3748340:1:exon
so has part: feature:3801672-3801830:1:exon
so has part: feature:3804946-3805418:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3736866-3737064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3739068-3739184:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3748194-3748340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3801672-3801830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3804946-3805418:1:exon

BARX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3799726..3864078)
location: region:3799726-3864078:-1
so has part: feature:3799726-3864078:-1:exon
subclass of: SO_0000010

105094275
type: Gene
SIO_000068: ncbigene

position:3799726:-1
position: 3799726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3864078:-1
position: 3864078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3799726-3864078:-1:exon

BARX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: BARX2
product: BARX homeobox 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_010986276.2
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: complement(join(3799726..3800678,3808521..3808605,3811899..3812196,3863782..3864078))
location: region:3799726-3864078:-1
so has part: feature:3863782-3864078:-1:exon
so has part: feature:3811899-3812196:-1:exon
so has part: feature:3808521-3808605:-1:exon
so has part: feature:3799726-3800678:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3863782-3864078:-1:exon

position:3863782:-1
position: 3863782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3811899-3812196:-1:exon

position:3811899:-1
position: 3811899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3812196:-1
position: 3812196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3808521-3808605:-1:exon

position:3808521:-1
position: 3808521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3808605:-1
position: 3808605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3799726-3800678:-1:exon

position:3800678:-1
position: 3800678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BARX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: BARX2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein BarH-like 2
translation: MHCHAELXLSSPGQLKAARARYKTFMIDEILSKETCDYFEKLSLYSVCPSLVVRPKPLHSCTGPASLRAYPLLSVITRQPTVISHLVPAAPGIAQALSRHPATEATSAEAPGENVGSSESEAEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKLNSQAQSQEPREPSQGQEGICDTQEPKACGVPLEVAEPPSQPQELPVASSEPPPSS
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: complement(join(3800412..3800678,3808521..3808605,3811899..3812196,3863782..3863967))
location: region:3800412-3863967:-1
so has part: feature:3863782-3863967:-1:exon
so has part: feature:3811899-3812196:-1:exon
so has part: feature:3808521-3808605:-1:exon
so has part: feature:3800412-3800678:-1:exon

XP_010984578.2
type: Protein
SIO_000068: ncbiprotein

position:3800412:-1
position: 3800412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3863967:-1
position: 3863967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3863782-3863967:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3811899-3812196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3808521-3808605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3800412-3800678:-1:exon

LOC116150165
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3880180..3882859)
location: region:3880180-3882859:-1
so has part: feature:3880180-3882859:-1:exon
subclass of: SO_0000011

116150165
type: Gene
SIO_000068: ncbigene

position:3880180:-1
position: 3880180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3882859:-1
position: 3882859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3880180-3882859:-1:exon

LOC116150165
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150165
product: uncharacterized LOC116150165, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004133819.1
SIO_010081: LOC116150165
subclass of: SO_0000673
so part of: LOC116150165
location: complement(join(3880180..3880214,3880681..3881281,3881424..3881578,3882679..3882859))
location: region:3880180-3882859:-1
so has part: feature:3882679-3882859:-1:exon
so has part: feature:3881424-3881578:-1:exon
so has part: feature:3880681-3881281:-1:exon
so has part: feature:3880180-3880214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3882679-3882859:-1:exon

position:3882679:-1
position: 3882679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3881424-3881578:-1:exon

position:3881424:-1
position: 3881424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3881578:-1
position: 3881578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3880681-3881281:-1:exon

position:3880681:-1
position: 3880681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3881281:-1
position: 3881281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3880180-3880214:-1:exon

position:3880214:-1
position: 3880214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116150165
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150165
product: uncharacterized LOC116150165, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004133820.1
SIO_010081: LOC116150165
subclass of: SO_0000673
so part of: LOC116150165
location: complement(join(3880180..3880214,3880681..3881281,3881424..3881578,3881850..3882201))
location: region:3880180-3882201:-1
so has part: feature:3881850-3882201:-1:exon
so has part: feature:3881424-3881578:-1:exon
so has part: feature:3880681-3881281:-1:exon
so has part: feature:3880180-3880214:-1:exon

position:3882201:-1
position: 3882201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3881850-3882201:-1:exon

position:3881850:-1
position: 3881850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3881424-3881578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3880681-3881281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3880180-3880214:-1:exon

LOC116150123
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3943715..3972077)
location: region:3943715-3972077:-1
so has part: feature:3943715-3972077:-1:exon
subclass of: SO_0000010

116150123
type: Gene
SIO_000068: ncbigene

position:3943715:-1
position: 3943715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3972077:-1
position: 3972077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3943715-3972077:-1:exon

LOC116150123
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC116150123
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031443312.1
SIO_010081: LOC116150123
subclass of: SO_0000673
so part of: LOC116150123
location: complement(join(3943715..3944022,3944169..3944261,3945433..3946233,3946280..3946783,3972057..3972077))
location: region:3943715-3972077:-1
so has part: feature:3972057-3972077:-1:exon
so has part: feature:3946280-3946783:-1:exon
so has part: feature:3945433-3946233:-1:exon
so has part: feature:3944169-3944261:-1:exon
so has part: feature:3943715-3944022:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3972057-3972077:-1:exon

position:3972057:-1
position: 3972057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3946280-3946783:-1:exon

position:3946280:-1
position: 3946280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3946783:-1
position: 3946783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3945433-3946233:-1:exon

position:3945433:-1
position: 3945433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3946233:-1
position: 3946233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3944169-3944261:-1:exon

position:3944169:-1
position: 3944169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3944261:-1
position: 3944261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3943715-3944022:-1:exon

position:3944022:-1
position: 3944022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116150123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC116150123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116150123
translation: MATVYEQEDERENSTGAPASTAGGGHGESARGRRRRAPAPGTPGRPARASGREVQQAGNRRAPSAEARGSGPARARSAREAGEGARGGRGNPSGLLRTFDPNLYFKKNSSRKASQAPTASPSACPRHRAPALPRAPALPSPAAPPRRRGVAAPRSPLRAALRGAARRPPPRLLLVRLASEAAAGARPGAPRASASPAGRPVRLGGGRRAPGRGPRSPHLRHATASPSPAETAPGTRSSGSEPLTRRLRAAPAAPLPARGARPPEPGRPGLRSRAPPSCARDARSGEKRRAAAAAGTSTREEGGRSARAAEGGGGAPRPRLCCPERTCGGGAVGRGARGSPSPGREGRGAREGGRDASSGVRASSAASASASCCGAKIQNLPQQRYRREDILRDYGSGASPLPADPWLLSPRGDGEERGRCPSQEAPRLSISCAFWSKNQLSQKAFTSQSFATTPPNSAALTEY
SIO_010081: LOC116150123
subclass of: SO_0000673
so part of: LOC116150123
location: complement(join(3944196..3944261,3945433..3946233,3946280..3946783,3972057..3972077))
location: region:3944196-3972077:-1
so has part: feature:3972057-3972077:-1:exon
so has part: feature:3946280-3946783:-1:exon
so has part: feature:3945433-3946233:-1:exon
so has part: feature:3944196-3944261:-1:exon

XP_031299172.1
type: Protein
SIO_000068: ncbiprotein

position:3944196:-1
position: 3944196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3972057-3972077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3946280-3946783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3945433-3946233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3944196-3944261:-1:exon

ARHGAP32
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ARHGAP32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4003112..4120987
location: region:4003112-4120987:1
so has part: feature:4003112-4120987:1:exon
subclass of: SO_0000010

105094273
type: Gene
SIO_000068: ncbigene

position:4003112:1
position: 4003112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4120987:1
position: 4120987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4003112-4120987:1:exon

ARHGAP32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ARHGAP32
product: Rho GTPase activating protein 32
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031443386.1
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: join(4003112..4003361,4014233..4014341,4027823..4027914,4028455..4028496,4028867..4028951,4047756..4047842,4053992..4054129,4056148..4056240,4057079..4057201,4058745..4058822,4070781..4070862,4094980..4095129,4100884..4100986,4102449..4102593,4103029..4103111,4103877..4103984,4104260..4104405,4105063..4105258,4106790..4106935,4109214..4109285,4111108..4111989,4112719..4113683,4115081..4120987)
location: region:4003112-4120987:1
so has part: feature:4003112-4003361:1:exon
so has part: feature:4014233-4014341:1:exon
so has part: feature:4027823-4027914:1:exon
so has part: feature:4028455-4028496:1:exon
so has part: feature:4028867-4028951:1:exon
so has part: feature:4047756-4047842:1:exon
so has part: feature:4053992-4054129:1:exon
so has part: feature:4056148-4056240:1:exon
so has part: feature:4057079-4057201:1:exon
so has part: feature:4058745-4058822:1:exon
so has part: feature:4070781-4070862:1:exon
so has part: feature:4094980-4095129:1:exon
so has part: feature:4100884-4100986:1:exon
so has part: feature:4102449-4102593:1:exon
so has part: feature:4103029-4103111:1:exon
so has part: feature:4103877-4103984:1:exon
so has part: feature:4104260-4104405:1:exon
so has part: feature:4105063-4105258:1:exon
so has part: feature:4106790-4106935:1:exon
so has part: feature:4109214-4109285:1:exon
so has part: feature:4111108-4111989:1:exon
so has part: feature:4112719-4113683:1:exon
so has part: feature:4115081-4120987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4003112-4003361:1:exon

position:4003361:1
position: 4003361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4014233-4014341:1:exon

position:4014233:1
position: 4014233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4014341:1
position: 4014341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4027823-4027914:1:exon

position:4027823:1
position: 4027823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4027914:1
position: 4027914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4028455-4028496:1:exon

position:4028455:1
position: 4028455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4028496:1
position: 4028496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4028867-4028951:1:exon

position:4028867:1
position: 4028867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4028951:1
position: 4028951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4047756-4047842:1:exon

position:4047756:1
position: 4047756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4047842:1
position: 4047842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4053992-4054129:1:exon

position:4053992:1
position: 4053992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4054129:1
position: 4054129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4056148-4056240:1:exon

position:4056148:1
position: 4056148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4056240:1
position: 4056240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4057079-4057201:1:exon

position:4057079:1
position: 4057079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4057201:1
position: 4057201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4058745-4058822:1:exon

position:4058745:1
position: 4058745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4058822:1
position: 4058822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4070781-4070862:1:exon

position:4070781:1
position: 4070781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4070862:1
position: 4070862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4094980-4095129:1:exon

position:4094980:1
position: 4094980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4095129:1
position: 4095129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4100884-4100986:1:exon

position:4100884:1
position: 4100884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4100986:1
position: 4100986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4102449-4102593:1:exon

position:4102449:1
position: 4102449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4102593:1
position: 4102593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4103029-4103111:1:exon

position:4103029:1
position: 4103029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4103111:1
position: 4103111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4103877-4103984:1:exon

position:4103877:1
position: 4103877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4103984:1
position: 4103984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4104260-4104405:1:exon

position:4104260:1
position: 4104260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4104405:1
position: 4104405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4105063-4105258:1:exon

position:4105063:1
position: 4105063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4105258:1
position: 4105258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4106790-4106935:1:exon

position:4106790:1
position: 4106790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4106935:1
position: 4106935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4109214-4109285:1:exon

position:4109214:1
position: 4109214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4109285:1
position: 4109285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4111108-4111989:1:exon

position:4111108:1
position: 4111108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4111989:1
position: 4111989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4112719-4113683:1:exon

position:4112719:1
position: 4112719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4113683:1
position: 4113683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4115081-4120987:1:exon

position:4115081:1
position: 4115081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGAP32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ARHGAP32
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rho GTPase-activating protein 32
translation: METESESSTSGDDSVFWLDSEVITPVTDGEEEGREEHSRKMKSSVHSEEDDFVPELHRNVHPRERPDWEETLSAMARGADVPEIPGDLSLKTCGSTASMKVKHVKKPTNPGLMGCDNIHRLPFTKGHFPKMAECAHFHYENVEFGSIQLSLSEEQNEVTKNGCESKELVYLVHIACQGKSWIVKRSYEDFRVLDKHLHLCIYDRRFSQLSELPRSDTLKDSPESVTQMLMAYLSRLSAIAGNKINCGPALTWMEMDNKGNHLLVHEESSINTPAVGAAHVIKRYTARAPDELTLEVGDIVSVIDMPPKVLSTWWRGKHGFQVGLFPGHCVELINQKVPQSVTNSVPKPVSKKHGKLITFLRTFMKSRPTKQKLKQRGILKERVFGCDLGEHLLNSGFEVPQVLQSCTAFIERYGIVDGIYRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIHDVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHVDVLFSGRISAAMQEGAASLSRPKSLLVPSPSTKLLTLEEAQARTQAQVTSPAVSENKYIEVGEGPAALQGKFHTVIEFPLERRRPQNKMKKSPVGSWRSFFNLGKSSSVSKRKLQRNESEPSEMKAAALKGGRAEGTLRSAKSEESLTSLHAVDGDSKLFRPRRPRSSSDALSASFNGEMLGNRCNSYDNLPHDESEEEVGLLHVPALLSPHSAEDVDLSPPDIGVASLDFDPMSFQCSPPKAESECLEGGASFFDSLGYSKDRQNTNNKDSEAGGSQSQTPGSAASSEPVSPVQEKLSPFFTLDLSPTEEKPSKASSFTEKVVYAFSPKIGRKLSRSPSMNISEPISVTLPARVSEVIGTASNTAAQDAPSPTWNKSVEESDVINRPPTQVVKLKASEREAQEGCESAAQPLGQVAPAGVESPGKEEEPASASSGQSKAVPPGQTQTGADNHDPPQDPVPVSSVSLIPPPPPPKNVARLLALALAESAQQASTQPPRRPGPSQAACASYGGLAVAAAEDRLPASHSSVTADRAFFQADMPTEQPHLQDGDQPAPGAAAVGDYTHSCATESGGQPHPADFPGSQPHRIYLAGDPEKAGVTSVPLTDSKSDDHLSFPEDQSAKTSVLTVSFVDQDRSQPRLYSGEQPSSYLGASVDKPHHPLELADKSPTPCNLPRDKVYPPPGSPEEDTSTAPVAYVTTVPTAAEMSTREAGWDVVEQPSAVDFAVATLQRTHRTSRPLPLPPSQRATEQLPGPGQGQAAASVGVHNPHKVPGVVPALERPPEPRAAGDPAPVLASDGTAAQCPAATPALQPGLPEKVREGXRAPPLPLRAEPAPVHPACGFPGPXPPARTADGKIAAAAHCIGADAACGPGPHAFAGAAPASVDDDVLPLPLPVPQPKHASQRTAYSAFARPDVSTEPFSLENCLHFNVTPNCQYRPQSVPPHHSKVEPHPAFASRSEPPASVGPRYNTYVAPGEKRVGHHWKPCGRAEYVSSLGAAVRGGCYPEDAPPHPTIRRVQSLHAPPSSVIRSVPISRTEVPPDEEPAFCPRPLHQYKPCPPPAGPPRYHVTQLQPYFENGRVHYRYSPYSGAAGALCDLDACGALPLRPLHRLPGRDLAFCNPRLQGKSVLGYAGLPPRPRAGAPGYFSANDHSVVSMPPVADVKHSYTSWDLEDMEKYRVQSIRRESRARQKVKGPVVSQYDNMAPAAQDDLGGIYVIHLRSKSDPGKTGLLSVAEGKEGRHAVKAVSPEGEDRFYRKHAEPELDRAHPHGAYGGGQPEKPCLPQKQSSLRNRKLHDMGCGLPEHRGHQEASHRQLCESKHGPPYPQGAGQLDYGPQGIPDASEPVSYHNSGGIYVPSGQESLRLNHKEVRLSKELERPRARQPPAPEKHSRDGYKEEEHLAPSVVPPPKPERSHSLKLHHAQS…
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: join(4003246..4003361,4014233..4014341,4027823..4027914,4028455..4028496,4028867..4028951,4047756..4047842,4053992..4054129,4056148..4056240,4057079..4057201,4058745..4058822,4070781..4070862,4094980..4095129,4100884..4100986,4102449..4102593,4103029..4103111,4103877..4103984,4104260..4104405,4105063..4105258,4106790..4106935,4109214..4109285,4111108..4111989,4112719..4113683,4115081..4117316)
location: region:4003246-4117316:1
so has part: feature:4003246-4003361:1:exon
so has part: feature:4014233-4014341:1:exon
so has part: feature:4027823-4027914:1:exon
so has part: feature:4028455-4028496:1:exon
so has part: feature:4028867-4028951:1:exon
so has part: feature:4047756-4047842:1:exon
so has part: feature:4053992-4054129:1:exon
so has part: feature:4056148-4056240:1:exon
so has part: feature:4057079-4057201:1:exon
so has part: feature:4058745-4058822:1:exon
so has part: feature:4070781-4070862:1:exon
so has part: feature:4094980-4095129:1:exon
so has part: feature:4100884-4100986:1:exon
so has part: feature:4102449-4102593:1:exon
so has part: feature:4103029-4103111:1:exon
so has part: feature:4103877-4103984:1:exon
so has part: feature:4104260-4104405:1:exon
so has part: feature:4105063-4105258:1:exon
so has part: feature:4106790-4106935:1:exon
so has part: feature:4109214-4109285:1:exon
so has part: feature:4111108-4111989:1:exon
so has part: feature:4112719-4113683:1:exon
so has part: feature:4115081-4117316:1:exon

XP_031299246.1
type: Protein
SIO_000068: ncbiprotein

position:4003246:1
position: 4003246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4117316:1
position: 4117316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4003246-4003361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4014233-4014341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4027823-4027914:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4028455-4028496:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4028867-4028951:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4047756-4047842:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4053992-4054129:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4056148-4056240:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4057079-4057201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4058745-4058822:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4070781-4070862:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4094980-4095129:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4100884-4100986:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4102449-4102593:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4103029-4103111:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4103877-4103984:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4104260-4104405:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4105063-4105258:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4106790-4106935:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4109214-4109285:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4111108-4111989:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4112719-4113683:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4115081-4117316:1:exon

KCNJ5
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4143009..4162937)
location: region:4143009-4162937:-1
so has part: feature:4143009-4162937:-1:exon
subclass of: SO_0000010

105094272
type: Gene
SIO_000068: ncbigene

position:4143009:-1
position: 4143009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4162937:-1
position: 4162937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4143009-4162937:-1:exon

KCNJ5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: KCNJ5
product: potassium inwardly rectifying channel subfamily J member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010986273.2
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: complement(join(4143009..4146195,4149155..4150093,4162679..4162937))
location: region:4143009-4162937:-1
so has part: feature:4162679-4162937:-1:exon
so has part: feature:4149155-4150093:-1:exon
so has part: feature:4143009-4146195:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4162679-4162937:-1:exon

position:4162679:-1
position: 4162679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4149155-4150093:-1:exon

position:4149155:-1
position: 4149155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4150093:-1
position: 4150093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4143009-4146195:-1:exon

position:4146195:-1
position: 4146195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNJ5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4
translation: MAGDSRNAMNQDMEIGVTTRDPKKIPKQARDYIPIATDRTRLLVEGRRPRQRYMEKSGKCNVHHGNVQETYRYLSDLFTTLVDLKWRFNLLVFTMVYTVTWLFFGFIWWLIAYIRGDLDHVGDQEWIPCVENLSGFVSAFLFSIETETTIGYGFRVITEKCPEGIILLLVQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNHAVISLRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSRQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHEINEKSPFWEMSRAQLNQEEFEVVVILEGMVEATGMTCQARSSYMDTEVLWGHRFTPVLTLEKGFYEVDYNTFHDTYETNTPSCCAKELAEMRREGRLLQYLPSAPLPGGGAGAELEPEAEQDGEDEPEGLSGSREPRGSV
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: complement(join(4145873..4146195,4149155..4150091))
location: region:4145873-4150091:-1
so has part: feature:4149155-4150091:-1:exon
so has part: feature:4145873-4146195:-1:exon

XP_010984575.1
type: Protein
SIO_000068: ncbiprotein

position:4145873:-1
position: 4145873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4150091:-1
position: 4150091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4149155-4150091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4145873-4146195:-1:exon

KCNJ1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: KCNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4176989..4204188
location: region:4176989-4204188:1
so has part: feature:4176989-4204188:1:exon
subclass of: SO_0000010

105094271
type: Gene
SIO_000068: ncbigene

position:4176989:1
position: 4176989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4204188:1
position: 4204188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4176989-4204188:1:exon

KCNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: KCNJ1
product: potassium inwardly rectifying channel subfamily J member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010986272.2
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: join(4176989..4177188,4201762..4204188)
location: region:4176989-4204188:1
so has part: feature:4176989-4177188:1:exon
so has part: feature:4201762-4204188:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4176989-4177188:1:exon

position:4177188:1
position: 4177188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4201762-4204188:1:exon

position:4201762:1
position: 4201762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: KCNJ1
product: potassium inwardly rectifying channel subfamily J member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031443387.1
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: join(4198336..4198589,4201762..4204188)
location: region:4198336-4204188:1
so has part: feature:4198336-4198589:1:exon
so has part: feature:4201762-4204188:1:exon

position:4198336:1
position: 4198336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4198336-4198589:1:exon

position:4198589:1
position: 4198589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4201762-4204188:1:exon

KCNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: KCNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-sensitive inward rectifier potassium channel 1 isoform X1
translation: MFKMLTRLLTERMLKHLRKWFVTRFLGHSRQRARLVSKDGRCNIEFGNVEVQSRLIFFVDIWTTVLDLKWRYKMTIFITAFLGSWFFFGLLWYAVAYLHKDLPEFHPSVNHTPCVEHINGLTSAFLFSLETQVTIGYGFRCVTEQCATAIFLLIVQSILGVIINSFMCGAILAKISRPKKRAKTITFSKNAVISKRGGKLCLLIRVANLRKSLLISSHIYGKLLKTTVTPEGETIILDQININFVVDAGNENLFFISPLTIYHVIDHSSPFFHMAAETLPQQDFELVVFLDGTVESTSATCQVRTSYVPEEVLWGYRFAPIVSKTKEGKYRVDFHNFSKTVEVETPHCAMCLYNEKDARARMKRGYDNPNFILSEVNEVDDTKM
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: join(4198575..4198589,4201762..4202901)
location: region:4198575-4202901:1
so has part: feature:4198575-4198589:1:exon
so has part: feature:4201762-4202901:1:exon

XP_031299247.1
type: Protein
SIO_000068: ncbiprotein

position:4198575:1
position: 4198575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4202901:1
position: 4202901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4198575-4198589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4201762-4202901:1:exon

KCNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: KCNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-sensitive inward rectifier potassium channel 1 isoform X2
translation: MLKHLRKWFVTRFLGHSRQRARLVSKDGRCNIEFGNVEVQSRLIFFVDIWTTVLDLKWRYKMTIFITAFLGSWFFFGLLWYAVAYLHKDLPEFHPSVNHTPCVEHINGLTSAFLFSLETQVTIGYGFRCVTEQCATAIFLLIVQSILGVIINSFMCGAILAKISRPKKRAKTITFSKNAVISKRGGKLCLLIRVANLRKSLLISSHIYGKLLKTTVTPEGETIILDQININFVVDAGNENLFFISPLTIYHVIDHSSPFFHMAAETLPQQDFELVVFLDGTVESTSATCQVRTSYVPEEVLWGYRFAPIVSKTKEGKYRVDFHNFSKTVEVETPHCAMCLYNEKDARARMKRGYDNPNFILSEVNEVDDTKM
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: 4201783..4202901
location: region:4201783-4202901:1
so has part: feature:4201783-4202901:1:exon

XP_010984574.2
type: Protein
SIO_000068: ncbiprotein

position:4201783:1
position: 4201783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4201783-4202901:1:exon

FLI1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4225853..4335721)
location: region:4225853-4335721:-1
so has part: feature:4225853-4335721:-1:exon
subclass of: SO_0000010

105094290
type: Gene
SIO_000068: ncbigene

position:4225853:-1
position: 4225853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4335721:-1
position: 4335721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4225853-4335721:-1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031443391.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(4225853..4227862,4229018..4229065,4230945..4231004,4254322..4254387,4262339..4262542,4266592..4266746,4275336..4275547,4335588..4335721))
location: region:4225853-4335721:-1
so has part: feature:4335588-4335721:-1:exon
so has part: feature:4275336-4275547:-1:exon
so has part: feature:4266592-4266746:-1:exon
so has part: feature:4262339-4262542:-1:exon
so has part: feature:4254322-4254387:-1:exon
so has part: feature:4230945-4231004:-1:exon
so has part: feature:4229018-4229065:-1:exon
so has part: feature:4225853-4227862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4335588-4335721:-1:exon

position:4335588:-1
position: 4335588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4275336-4275547:-1:exon

position:4275336:-1
position: 4275336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4275547:-1
position: 4275547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4266592-4266746:-1:exon

position:4266592:-1
position: 4266592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4266746:-1
position: 4266746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4262339-4262542:-1:exon

position:4262339:-1
position: 4262339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4262542:-1
position: 4262542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4254322-4254387:-1:exon

position:4254322:-1
position: 4254322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4254387:-1
position: 4254387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4230945-4231004:-1:exon

position:4230945:-1
position: 4230945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4231004:-1
position: 4231004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4229018-4229065:-1:exon

position:4229018:-1
position: 4229018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4229065:-1
position: 4229065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4225853-4227862:-1:exon

position:4227862:-1
position: 4227862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_031443389.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(4225853..4227862,4229018..4229065,4230945..4231004,4232645..4232710,4254322..4254387,4262339..4262542,4266592..4266746,4275336..4275547,4335588..4335721))
location: region:4225853-4335721:-1
so has part: feature:4335588-4335721:-1:exon
so has part: feature:4275336-4275547:-1:exon
so has part: feature:4266592-4266746:-1:exon
so has part: feature:4262339-4262542:-1:exon
so has part: feature:4254322-4254387:-1:exon
so has part: feature:4232645-4232710:-1:exon
so has part: feature:4230945-4231004:-1:exon
so has part: feature:4229018-4229065:-1:exon
so has part: feature:4225853-4227862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4335588-4335721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4275336-4275547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266592-4266746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4262339-4262542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4254322-4254387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4232645-4232710:-1:exon

position:4232645:-1
position: 4232645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4232710:-1
position: 4232710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4230945-4231004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4229018-4229065:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4225853-4227862:-1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_031443390.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(4225853..4227862,4229018..4229065,4230945..4231004,4232645..4232710,4254322..4254387,4262339..4262542,4266592..4266746,4275336..4275547,4334375..4334711))
location: region:4225853-4334711:-1
so has part: feature:4334375-4334711:-1:exon
so has part: feature:4275336-4275547:-1:exon
so has part: feature:4266592-4266746:-1:exon
so has part: feature:4262339-4262542:-1:exon
so has part: feature:4254322-4254387:-1:exon
so has part: feature:4232645-4232710:-1:exon
so has part: feature:4230945-4231004:-1:exon
so has part: feature:4229018-4229065:-1:exon
so has part: feature:4225853-4227862:-1:exon

position:4334711:-1
position: 4334711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4334375-4334711:-1:exon

position:4334375:-1
position: 4334375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4275336-4275547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266592-4266746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4262339-4262542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4254322-4254387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4232645-4232710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4230945-4231004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4229018-4229065:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4225853-4227862:-1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X3
translation: MQCSGDLPASREGSSRRSEALSVVSDDQSLFDSAYGAAAHLPKADMTASGSPDYGQPHKINPLPPQQEWMNQPVRVSVKREYDHMNGSRESPVDCSVSKCGKLVGGGESNTMSYNSYMDEKNGPPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTSFFQNMDGKELCKMNKEDFLRATSLYNTEVLLSHLSYLRESSLLAYNTTSHTDPSSRLNVKEGPPLAGAQTMSKSTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTEPSMYKYPSDISYVPSYHAHQQKVNFVPPHPSSMPVTSSSFFGATPQYWTSPTGGIYPSPNVPRHPNTHVPSHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(4227333..4227862,4229018..4229065,4230945..4231004,4254322..4254387,4262339..4262542,4266592..4266746,4275336..4275547,4335588..4335641))
location: region:4227333-4335641:-1
so has part: feature:4335588-4335641:-1:exon
so has part: feature:4275336-4275547:-1:exon
so has part: feature:4266592-4266746:-1:exon
so has part: feature:4262339-4262542:-1:exon
so has part: feature:4254322-4254387:-1:exon
so has part: feature:4230945-4231004:-1:exon
so has part: feature:4229018-4229065:-1:exon
so has part: feature:4227333-4227862:-1:exon

XP_031299251.1
type: Protein
SIO_000068: ncbiprotein

position:4227333:-1
position: 4227333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4335641:-1
position: 4335641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4335588-4335641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4275336-4275547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266592-4266746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4262339-4262542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4254322-4254387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4230945-4231004:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4229018-4229065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4227333-4227862:-1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X1
translation: MQCSGDLPASREGSSRRSEALSVVSDDQSLFDSAYGAAAHLPKADMTASGSPDYGQPHKINPLPPQQEWMNQPVRVSVKREYDHMNGSRESPVDCSVSKCGKLVGGGESNTMSYNSYMDEKNGPPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTSFFQNMDGKELCKMNKEDFLRATSLYNTEVLLSHLSYLRESSLLAYNTTSHTDPSSRLNVKEDPSYDSVRRGGWGNSMNSGLNKSPPLAGAQTMSKSTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTEPSMYKYPSDISYVPSYHAHQQKVNFVPPHPSSMPVTSSSFFGATPQYWTSPTGGIYPSPNVPRHPNTHVPSHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(4227333..4227862,4229018..4229065,4230945..4231004,4232645..4232710,4254322..4254387,4262339..4262542,4266592..4266746,4275336..4275547,4335588..4335641))
location: region:4227333-4335641:-1
so has part: feature:4335588-4335641:-1:exon
so has part: feature:4275336-4275547:-1:exon
so has part: feature:4266592-4266746:-1:exon
so has part: feature:4262339-4262542:-1:exon
so has part: feature:4254322-4254387:-1:exon
so has part: feature:4232645-4232710:-1:exon
so has part: feature:4230945-4231004:-1:exon
so has part: feature:4229018-4229065:-1:exon
so has part: feature:4227333-4227862:-1:exon

XP_031299249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4335588-4335641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4275336-4275547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266592-4266746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4262339-4262542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4254322-4254387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4232645-4232710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4230945-4231004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4229018-4229065:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4227333-4227862:-1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X2
translation: MDGTIKEALSVVSDDQSLFDSAYGAAAHLPKADMTASGSPDYGQPHKINPLPPQQEWMNQPVRVSVKREYDHMNGSRESPVDCSVSKCGKLVGGGESNTMSYNSYMDEKNGPPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTSFFQNMDGKELCKMNKEDFLRATSLYNTEVLLSHLSYLRESSLLAYNTTSHTDPSSRLNVKEDPSYDSVRRGGWGNSMNSGLNKSPPLAGAQTMSKSTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTEPSMYKYPSDISYVPSYHAHQQKVNFVPPHPSSMPVTSSSFFGATPQYWTSPTGGIYPSPNVPRHPNTHVPSHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(4227333..4227862,4229018..4229065,4230945..4231004,4232645..4232710,4254322..4254387,4262339..4262542,4266592..4266746,4275336..4275547,4334375..4334392))
location: region:4227333-4334392:-1
so has part: feature:4334375-4334392:-1:exon
so has part: feature:4275336-4275547:-1:exon
so has part: feature:4266592-4266746:-1:exon
so has part: feature:4262339-4262542:-1:exon
so has part: feature:4254322-4254387:-1:exon
so has part: feature:4232645-4232710:-1:exon
so has part: feature:4230945-4231004:-1:exon
so has part: feature:4229018-4229065:-1:exon
so has part: feature:4227333-4227862:-1:exon

XP_031299250.1
type: Protein
SIO_000068: ncbiprotein

position:4334392:-1
position: 4334392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4334375-4334392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4275336-4275547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266592-4266746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4262339-4262542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4254322-4254387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4232645-4232710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4230945-4231004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4229018-4229065:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4227333-4227862:-1:exon

LOC116150167
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150167
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4244307..4245953
location: region:4244307-4245953:1
so has part: feature:4244307-4245953:1:exon
subclass of: SO_0000011

116150167
type: Gene
SIO_000068: ncbigene

position:4244307:1
position: 4244307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4245953:1
position: 4245953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4244307-4245953:1:exon

LOC116150167
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150167
product: uncharacterized LOC116150167
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004133825.1
SIO_010081: LOC116150167
subclass of: SO_0000673
so part of: LOC116150167
location: join(4244307..4244440,4244598..4244683,4245165..4245343,4245864..4245953)
location: region:4244307-4245953:1
so has part: feature:4244307-4244440:1:exon
so has part: feature:4244598-4244683:1:exon
so has part: feature:4245165-4245343:1:exon
so has part: feature:4245864-4245953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4244307-4244440:1:exon

position:4244440:1
position: 4244440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4244598-4244683:1:exon

position:4244598:1
position: 4244598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4244683:1
position: 4244683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4245165-4245343:1:exon

position:4245165:1
position: 4245165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4245343:1
position: 4245343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4245864-4245953:1:exon

position:4245864:1
position: 4245864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116150166
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150166
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4335902..4337012
location: region:4335902-4337012:1
so has part: feature:4335902-4337012:1:exon
subclass of: SO_0000011

116150166
type: Gene
SIO_000068: ncbigene

position:4335902:1
position: 4335902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4337012:1
position: 4337012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4335902-4337012:1:exon

LOC116150166
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150166
product: uncharacterized LOC116150166
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_004133824.1
SIO_010081: LOC116150166
subclass of: SO_0000673
so part of: LOC116150166
location: join(4335902..4336034,4336568..4337012)
location: region:4335902-4337012:1
so has part: feature:4335902-4336034:1:exon
so has part: feature:4336568-4337012:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4335902-4336034:1:exon

position:4336034:1
position: 4336034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4336568-4337012:1:exon

position:4336568:1
position: 4336568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116150168
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150168
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4354267..4368328
location: region:4354267-4368328:1
so has part: feature:4354267-4368328:1:exon
subclass of: SO_0000011

116150168
type: Gene
SIO_000068: ncbigene

position:4354267:1
position: 4354267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4368328:1
position: 4368328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4354267-4368328:1:exon

LOC116150168
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150168
product: uncharacterized LOC116150168
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004133826.1
SIO_010081: LOC116150168
subclass of: SO_0000673
so part of: LOC116150168
location: join(4354267..4354877,4356526..4357046,4363260..4365267,4366665..4366771,4368254..4368328)
location: region:4354267-4368328:1
so has part: feature:4354267-4354877:1:exon
so has part: feature:4356526-4357046:1:exon
so has part: feature:4363260-4365267:1:exon
so has part: feature:4366665-4366771:1:exon
so has part: feature:4368254-4368328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4354267-4354877:1:exon

position:4354877:1
position: 4354877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4356526-4357046:1:exon

position:4356526:1
position: 4356526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4357046:1
position: 4357046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4363260-4365267:1:exon

position:4363260:1
position: 4363260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4365267:1
position: 4365267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4366665-4366771:1:exon

position:4366665:1
position: 4366665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4366771:1
position: 4366771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4368254-4368328:1:exon

position:4368254:1
position: 4368254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105094270
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105094270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4384926..4402356
location: region:4384926-4402356:1
so has part: feature:4384926-4402356:1:exon
subclass of: SO_0000011

105094270
type: Gene
SIO_000068: ncbigene

position:4384926:1
position: 4384926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4402356:1
position: 4402356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4384926-4402356:1:exon

LOC105094270
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105094270
product: uncharacterized LOC105094270, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004133827.1
SIO_010081: LOC105094270
subclass of: SO_0000673
so part of: LOC105094270
location: join(4384926..4387375,4397254..4398549,4398965..4399094,4399254..4400693,4401188..4402356)
location: region:4384926-4402356:1
so has part: feature:4384926-4387375:1:exon
so has part: feature:4397254-4398549:1:exon
so has part: feature:4398965-4399094:1:exon
so has part: feature:4399254-4400693:1:exon
so has part: feature:4401188-4402356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4384926-4387375:1:exon

position:4387375:1
position: 4387375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4397254-4398549:1:exon

position:4397254:1
position: 4397254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4398549:1
position: 4398549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4398965-4399094:1:exon

position:4398965:1
position: 4398965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4399094:1
position: 4399094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4399254-4400693:1:exon

position:4399254:1
position: 4399254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4400693:1
position: 4400693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4401188-4402356:1:exon

position:4401188:1
position: 4401188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105094270
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105094270
product: uncharacterized LOC105094270, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004133828.1
SIO_010081: LOC105094270
subclass of: SO_0000673
so part of: LOC105094270
location: join(4384926..4387375,4397254..4398549,4398965..4399094,4399254..4399821,4400122..4402356)
location: region:4384926-4402356:1
so has part: feature:4384926-4387375:1:exon
so has part: feature:4397254-4398549:1:exon
so has part: feature:4398965-4399094:1:exon
so has part: feature:4399254-4399821:1:exon
so has part: feature:4400122-4402356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4384926-4387375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4397254-4398549:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4398965-4399094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4399254-4399821:1:exon

position:4399821:1
position: 4399821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4400122-4402356:1:exon

position:4400122:1
position: 4400122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105094270
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105094270
product: uncharacterized LOC105094270, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_837637.2
SIO_010081: LOC105094270
subclass of: SO_0000673
so part of: LOC105094270
location: join(4394576..4396875,4397254..4398549,4398965..4399094,4399254..4399822)
location: region:4394576-4399822:1
so has part: feature:4394576-4396875:1:exon
so has part: feature:4397254-4398549:1:exon
so has part: feature:4398965-4399094:1:exon
so has part: feature:4399254-4399822:1:exon

position:4394576:1
position: 4394576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4399822:1
position: 4399822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4394576-4396875:1:exon

position:4396875:1
position: 4396875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4397254-4398549:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4398965-4399094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4399254-4399822:1:exon

ETS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4415404..4537017
location: region:4415404-4537017:1
so has part: feature:4415404-4537017:1:exon
subclass of: SO_0000010

105094269
type: Gene
SIO_000068: ncbigene

position:4415404:1
position: 4415404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4537017:1
position: 4537017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4415404-4537017:1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_031443392.1
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: join(4415404..4415502,4428254..4428336,4441765..4441909,4505077..4505196,4506486..4506686,4509809..4509886,4510939..4511187,4532195..4532313,4533259..4537017)
location: region:4415404-4537017:1
so has part: feature:4415404-4415502:1:exon
so has part: feature:4428254-4428336:1:exon
so has part: feature:4441765-4441909:1:exon
so has part: feature:4505077-4505196:1:exon
so has part: feature:4506486-4506686:1:exon
so has part: feature:4509809-4509886:1:exon
so has part: feature:4510939-4511187:1:exon
so has part: feature:4532195-4532313:1:exon
so has part: feature:4533259-4537017:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4415404-4415502:1:exon

position:4415502:1
position: 4415502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4428254-4428336:1:exon

position:4428254:1
position: 4428254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4428336:1
position: 4428336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4441765-4441909:1:exon

position:4441765:1
position: 4441765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4441909:1
position: 4441909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4505077-4505196:1:exon

position:4505077:1
position: 4505077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4505196:1
position: 4505196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4506486-4506686:1:exon

position:4506486:1
position: 4506486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4506686:1
position: 4506686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4509809-4509886:1:exon

position:4509809:1
position: 4509809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4509886:1
position: 4509886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4510939-4511187:1:exon

position:4510939:1
position: 4510939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4511187:1
position: 4511187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4532195-4532313:1:exon

position:4532195:1
position: 4532195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4532313:1
position: 4532313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4533259-4537017:1:exon

position:4533259:1
position: 4533259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_010986269.2
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: join(4415408..4415502,4428254..4428336,4441765..4441909,4505077..4505196,4506486..4506686,4509809..4509886,4510939..4511187,4515465..4515725,4532195..4532313,4533259..4537017)
location: region:4415408-4537017:1
so has part: feature:4415408-4415502:1:exon
so has part: feature:4428254-4428336:1:exon
so has part: feature:4441765-4441909:1:exon
so has part: feature:4505077-4505196:1:exon
so has part: feature:4506486-4506686:1:exon
so has part: feature:4509809-4509886:1:exon
so has part: feature:4510939-4511187:1:exon
so has part: feature:4515465-4515725:1:exon
so has part: feature:4532195-4532313:1:exon
so has part: feature:4533259-4537017:1:exon

position:4415408:1
position: 4415408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4415408-4415502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4428254-4428336:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4441765-4441909:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4505077-4505196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4506486-4506686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4509809-4509886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4510939-4511187:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4515465-4515725:1:exon

position:4515465:1
position: 4515465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4515725:1
position: 4515725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4532195-4532313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4533259-4537017:1:exon

LOC116150170
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4424298..4436376)
location: region:4424298-4436376:-1
so has part: feature:4424298-4436376:-1:exon
subclass of: SO_0000011

116150170
type: Gene
SIO_000068: ncbigene

position:4424298:-1
position: 4424298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4436376:-1
position: 4436376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4424298-4436376:-1:exon

LOC116150170
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150170
product: uncharacterized LOC116150170
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004133830.1
SIO_010081: LOC116150170
subclass of: SO_0000673
so part of: LOC116150170
location: complement(join(4424298..4426899,4429315..4429412,4432490..4432672,4434120..4436376))
location: region:4424298-4436376:-1
so has part: feature:4434120-4436376:-1:exon
so has part: feature:4432490-4432672:-1:exon
so has part: feature:4429315-4429412:-1:exon
so has part: feature:4424298-4426899:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4434120-4436376:-1:exon

position:4434120:-1
position: 4434120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4432490-4432672:-1:exon

position:4432490:-1
position: 4432490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4432672:-1
position: 4432672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4429315-4429412:-1:exon

position:4429315:-1
position: 4429315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4429412:-1
position: 4429412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4424298-4426899:-1:exon

position:4426899:-1
position: 4426899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X1
translation: MSYFVDSAVSGPAPGSAGRPAVLRQGPINSYEDPRMACGFQAAYHLPRACYPFWDETATQEVPTGLEHCSSDMECADVPLLTPSSKEMMSQALKATFSGFSKEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQTDYFAIKQEVVTPDNMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYAPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: join(4428268..4428336,4441765..4441909,4505077..4505196,4506486..4506686,4509809..4509886,4510939..4511187,4515465..4515725,4532195..4532313,4533259..4533474)
location: region:4428268-4533474:1
so has part: feature:4428268-4428336:1:exon
so has part: feature:4441765-4441909:1:exon
so has part: feature:4505077-4505196:1:exon
so has part: feature:4506486-4506686:1:exon
so has part: feature:4509809-4509886:1:exon
so has part: feature:4510939-4511187:1:exon
so has part: feature:4515465-4515725:1:exon
so has part: feature:4532195-4532313:1:exon
so has part: feature:4533259-4533474:1:exon

XP_010984571.1
type: Protein
SIO_000068: ncbiprotein

position:4428268:1
position: 4428268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4533474:1
position: 4533474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4428268-4428336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4441765-4441909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4505077-4505196:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4506486-4506686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4509809-4509886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4510939-4511187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4515465-4515725:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4532195-4532313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4533259-4533474:1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X4
translation: MSYFVDSAVSGPAPGSAGRPAVLRQGPINSYEDPRMACGFQAAYHLPRACYPFWDETATQEVPTGLEHCSSDMECADVPLLTPSSKEMMSQALKATFSGFSKEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQTDYFAIKQEVVTPDNMCMGRTSRGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYAPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: join(4428268..4428336,4441765..4441909,4505077..4505196,4506486..4506686,4509809..4509886,4510939..4511187,4532195..4532313,4533259..4533474)
location: region:4428268-4533474:1
so has part: feature:4428268-4428336:1:exon
so has part: feature:4441765-4441909:1:exon
so has part: feature:4505077-4505196:1:exon
so has part: feature:4506486-4506686:1:exon
so has part: feature:4509809-4509886:1:exon
so has part: feature:4510939-4511187:1:exon
so has part: feature:4532195-4532313:1:exon
so has part: feature:4533259-4533474:1:exon

XP_031299252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4428268-4428336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4441765-4441909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4505077-4505196:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4506486-4506686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4509809-4509886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4510939-4511187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4532195-4532313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4533259-4533474:1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_010986271.2
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: join(4453056..4453190,4505077..4505196,4506486..4506686,4509809..4509886,4510939..4511187,4515465..4515725,4532195..4532313,4533259..4537017)
location: region:4453056-4537017:1
so has part: feature:4453056-4453190:1:exon
so has part: feature:4505077-4505196:1:exon
so has part: feature:4506486-4506686:1:exon
so has part: feature:4509809-4509886:1:exon
so has part: feature:4510939-4511187:1:exon
so has part: feature:4515465-4515725:1:exon
so has part: feature:4532195-4532313:1:exon
so has part: feature:4533259-4537017:1:exon

position:4453056:1
position: 4453056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4453056-4453190:1:exon

position:4453190:1
position: 4453190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4505077-4505196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4506486-4506686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4509809-4509886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4510939-4511187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4515465-4515725:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4532195-4532313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4533259-4537017:1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031443393.1
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: join(4472829..4473261,4505077..4505196,4506486..4506686,4509809..4509886,4510939..4511187,4532195..4532313,4533259..4537017)
location: region:4472829-4537017:1
so has part: feature:4472829-4473261:1:exon
so has part: feature:4505077-4505196:1:exon
so has part: feature:4506486-4506686:1:exon
so has part: feature:4509809-4509886:1:exon
so has part: feature:4510939-4511187:1:exon
so has part: feature:4532195-4532313:1:exon
so has part: feature:4533259-4537017:1:exon

position:4472829:1
position: 4472829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4472829-4473261:1:exon

position:4473261:1
position: 4473261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4505077-4505196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4506486-4506686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4509809-4509886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4510939-4511187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4532195-4532313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4533259-4537017:1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_010986270.2
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: join(4472831..4473261,4505077..4505196,4506486..4506686,4509809..4509886,4510939..4511187,4515465..4515725,4532195..4532313,4533259..4537017)
location: region:4472831-4537017:1
so has part: feature:4472831-4473261:1:exon
so has part: feature:4505077-4505196:1:exon
so has part: feature:4506486-4506686:1:exon
so has part: feature:4509809-4509886:1:exon
so has part: feature:4510939-4511187:1:exon
so has part: feature:4515465-4515725:1:exon
so has part: feature:4532195-4532313:1:exon
so has part: feature:4533259-4537017:1:exon

position:4472831:1
position: 4472831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4472831-4473261:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4505077-4505196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4506486-4506686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4509809-4509886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4510939-4511187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4515465-4515725:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4532195-4532313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4533259-4537017:1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X2
translation: MKAAVDLKPTLTIIKTEKVDLELFPSPDMECADVPLLTPSSKEMMSQALKATFSGFSKEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQTDYFAIKQEVVTPDNMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYAPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: join(4473180..4473261,4505077..4505196,4506486..4506686,4509809..4509886,4510939..4511187,4515465..4515725,4532195..4532313,4533259..4533474)
location: region:4473180-4533474:1
so has part: feature:4473180-4473261:1:exon
so has part: feature:4505077-4505196:1:exon
so has part: feature:4506486-4506686:1:exon
so has part: feature:4509809-4509886:1:exon
so has part: feature:4510939-4511187:1:exon
so has part: feature:4515465-4515725:1:exon
so has part: feature:4532195-4532313:1:exon
so has part: feature:4533259-4533474:1:exon

XP_010984572.1
type: Protein
SIO_000068: ncbiprotein

position:4473180:1
position: 4473180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4473180-4473261:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4505077-4505196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4506486-4506686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4509809-4509886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4510939-4511187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4515465-4515725:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4532195-4532313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4533259-4533474:1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X5
translation: MKAAVDLKPTLTIIKTEKVDLELFPSPDMECADVPLLTPSSKEMMSQALKATFSGFSKEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQTDYFAIKQEVVTPDNMCMGRTSRGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYAPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: join(4473180..4473261,4505077..4505196,4506486..4506686,4509809..4509886,4510939..4511187,4532195..4532313,4533259..4533474)
location: region:4473180-4533474:1
so has part: feature:4473180-4473261:1:exon
so has part: feature:4505077-4505196:1:exon
so has part: feature:4506486-4506686:1:exon
so has part: feature:4509809-4509886:1:exon
so has part: feature:4510939-4511187:1:exon
so has part: feature:4532195-4532313:1:exon
so has part: feature:4533259-4533474:1:exon

XP_031299253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4473180-4473261:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4505077-4505196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4506486-4506686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4509809-4509886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4510939-4511187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4532195-4532313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4533259-4533474:1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X3
translation: MECADVPLLTPSSKEMMSQALKATFSGFSKEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQTDYFAIKQEVVTPDNMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYAPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: join(4505079..4505196,4506486..4506686,4509809..4509886,4510939..4511187,4515465..4515725,4532195..4532313,4533259..4533474)
location: region:4505079-4533474:1
so has part: feature:4505079-4505196:1:exon
so has part: feature:4506486-4506686:1:exon
so has part: feature:4509809-4509886:1:exon
so has part: feature:4510939-4511187:1:exon
so has part: feature:4515465-4515725:1:exon
so has part: feature:4532195-4532313:1:exon
so has part: feature:4533259-4533474:1:exon

XP_010984573.1
type: Protein
SIO_000068: ncbiprotein

position:4505079:1
position: 4505079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4505079-4505196:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4506486-4506686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4509809-4509886:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4510939-4511187:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4515465-4515725:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4532195-4532313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4533259-4533474:1:exon

TRNAP-AGG
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAP-AGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(4782899..4782971)
location: region:4782899-4782971:-1
so has part: feature:4782899-4782971:-1:exon
subclass of: SO_0000663

116150280
type: Gene
SIO_000068: ncbigene

position:4782899:-1
position: 4782899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4782971:-1
position: 4782971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4782899-4782971:-1:exon

TRNAP-AGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAP-AGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon AGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(4782936..4782938),aa:Pro, seq:agg)
SIO_010081: TRNAP-AGG
subclass of: SO_0000673
so part of: TRNAP-AGG
location: complement(4782899..4782971)
location: region:4782899-4782971:-1
so has part: feature:4782899-4782971:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4782899-4782971:-1:exon

LOC116150144
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116150144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4799778..4818472
location: region:4799778-4818472:1
so has part: feature:4799778-4818472:1:exon
subclass of: SO_0000011

116150144
type: Gene
SIO_000068: ncbigene

position:4799778:1
position: 4799778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4818472:1
position: 4818472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4799778-4818472:1:exon

LOC116150144
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116150144
product: uncharacterized LOC116150144
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004133782.1
SIO_010081: LOC116150144
subclass of: SO_0000673
so part of: LOC116150144
location: join(4799778..4799873,4815951..4816083,4817775..4818472)
location: region:4799778-4818472:1
so has part: feature:4799778-4799873:1:exon
so has part: feature:4815951-4816083:1:exon
so has part: feature:4817775-4818472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4799778-4799873:1:exon

position:4799873:1
position: 4799873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4815951-4816083:1:exon

position:4815951:1
position: 4815951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4816083:1
position: 4816083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4817775-4818472:1:exon

position:4817775:1
position: 4817775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KIRREL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5570688..6064157
location: region:5570688-6064157:1
so has part: feature:5570688-6064157:1:exon
subclass of: SO_0000010

105094268
type: Gene
SIO_000068: ncbigene

position:5570688:1
position: 5570688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition